-- dump date 20140619_133923 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 265669000001 SEQ_END SEQ_END NC_002973.6 2905187 2905187 DR NC_002973.6; contig end 2905187..2905187 Listeria monocytogenes serotype 4b str. F2365 YP_012614.1 CDS dnaA NC_002973.6 319 1674 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 319..1674 Listeria monocytogenes serotype 4b str. F2365 2797802 YP_012615.1 CDS dnaN NC_002973.6 1868 3013 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1868..3013 Listeria monocytogenes serotype 4b str. F2365 2797438 YP_012616.1 CDS LMOf2365_0003 NC_002973.6 3121 4464 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 3121..4464 Listeria monocytogenes serotype 4b str. F2365 2798218 YP_012617.1 CDS LMOf2365_0004 NC_002973.6 4644 4865 D identified by similarity to OMNI:NTL01LI0004; hypothetical protein 4644..4865 Listeria monocytogenes serotype 4b str. F2365 2798867 YP_012618.1 CDS recF NC_002973.6 4869 5981 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 4869..5981 Listeria monocytogenes serotype 4b str. F2365 2798160 YP_012619.1 CDS gyrB NC_002973.6 6030 7970 D identified by similarity to SP:P05652; match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF01751; match to protein family HMM PF02518; match to protein family HMM TIGR01059; DNA gyrase subunit B 6030..7970 Listeria monocytogenes serotype 4b str. F2365 2799363 YP_012620.1 CDS gyrA NC_002973.6 8065 10593 D identified by similarity to SP:P05653; match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01063; match to protein family HMM TIGR01967; DNA gyrase subunit A 8065..10593 Listeria monocytogenes serotype 4b str. F2365 2798865 YP_012621.1 CDS cls-1 NC_002973.6 10727 12241 D identified by similarity to SP:O66043; match to protein family HMM PF00614; cardiolipin synthetase 10727..12241 Listeria monocytogenes serotype 4b str. F2365 2799364 YP_012622.1 CDS speG NC_002973.6 12257 12775 D identified by similarity to SP:P37354; match to protein family HMM PF00583; spermidine N1-acetyltransferase 12257..12775 Listeria monocytogenes serotype 4b str. F2365 2797002 YP_012623.1 CDS LMOf2365_0010 NC_002973.6 12779 12895 D hypothetical protein 12779..12895 Listeria monocytogenes serotype 4b str. F2365 2798845 YP_012624.1 CDS LMOf2365_0011 NC_002973.6 12917 13885 D identified by similarity to GP:9937379; match to protein family HMM PF00288; match to protein family HMM TIGR00549; mevalonate kinase 12917..13885 Listeria monocytogenes serotype 4b str. F2365 2798266 YP_012625.1 CDS mvaD NC_002973.6 13842 14813 D identified by match to protein family HMM PF00288; match to protein family HMM TIGR01240; diphosphomevalonate decarboxylase 13842..14813 Listeria monocytogenes serotype 4b str. F2365 2799372 YP_012626.1 CDS LMOf2365_0013 NC_002973.6 14803 15873 D identified by match to protein family HMM PF00288; match to protein family HMM TIGR01220; phosphomevalonate kinase 14803..15873 Listeria monocytogenes serotype 4b str. F2365 2799374 YP_012627.1 CDS LMOf2365_0014 NC_002973.6 15966 16160 R hypothetical protein complement(15966..16160) Listeria monocytogenes serotype 4b str. F2365 2797976 YP_012628.1 CDS qoxA NC_002973.6 18301 19407 D identified by similarity to SP:P34957; match to protein family HMM PF02790; match to protein family HMM TIGR01432; quinol oxidase AA3, subunit II 18301..19407 Listeria monocytogenes serotype 4b str. F2365 2798376 YP_012629.1 CDS qoxB NC_002973.6 19426 21405 D identified by similarity to SP:P34956; match to protein family HMM PF00115; quinol oxidase AA3 subunit I 19426..21405 Listeria monocytogenes serotype 4b str. F2365 2797953 YP_012630.1 CDS qoxC NC_002973.6 21393 22004 D identified by similarity to SP:P34958; match to protein family HMM PF00510; quinol oxidase AA3 subunit III 21393..22004 Listeria monocytogenes serotype 4b str. F2365 2798842 YP_012631.1 CDS qoxD NC_002973.6 22006 22338 D identified by similarity to SP:P34959; match to protein family HMM PF03626; quinol oxidase AA3 subunit IV 22006..22338 Listeria monocytogenes serotype 4b str. F2365 2799365 YP_012632.1 CDS LMOf2365_0020 NC_002973.6 22389 23507 R identified by similarity to GP:4584121; hypothetical protein complement(22389..23507) Listeria monocytogenes serotype 4b str. F2365 2798288 YP_012633.1 CDS LMOf2365_0021 NC_002973.6 23733 25166 D identified by match to protein family HMM PF00232; glycosyl hydrolase 23733..25166 Listeria monocytogenes serotype 4b str. F2365 2798359 YP_012634.1 CDS LMOf2365_0022 NC_002973.6 25213 26034 R identified by similarity to OMNI:NTL01LI0018; hypothetical protein complement(25213..26034) Listeria monocytogenes serotype 4b str. F2365 2799366 YP_012635.1 CDS LMOf2365_0023 NC_002973.6 26275 27015 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 26275..27015 Listeria monocytogenes serotype 4b str. F2365 2799373 YP_012636.1 CDS LMOf2365_0024 NC_002973.6 27031 27432 D PTS system fructose-specific transporter subunit IIA 27031..27432 Listeria monocytogenes serotype 4b str. F2365 2798866 YP_012637.1 CDS LMOf2365_0025 NC_002973.6 27432 27920 D identified by match to protein family HMM PF03830; PTS system mannose/fructose/sorbose family transporter subunit IIB 27432..27920 Listeria monocytogenes serotype 4b str. F2365 2799375 YP_012638.1 CDS LMOf2365_0026 NC_002973.6 27943 28746 D identified by similarity to SP:P08187; match to protein family HMM PF03609; PTS system mannose-specific transporter subunit IIC 27943..28746 Listeria monocytogenes serotype 4b str. F2365 2797033 YP_012639.1 CDS LMOf2365_0027 NC_002973.6 28727 29548 D identified by similarity to SP:P08188; match to protein family HMM PF03613; PTS system mannose/fructose/sorbose family transporter subunit IID 28727..29548 Listeria monocytogenes serotype 4b str. F2365 2799369 YP_012640.1 CDS LMOf2365_0028 NC_002973.6 29576 30280 D identified by similarity to GP:8894743; hypothetical protein 29576..30280 Listeria monocytogenes serotype 4b str. F2365 2797771 YP_012641.1 CDS LMOf2365_0029 NC_002973.6 30335 30976 D identified by match to protein family HMM PF03932; cutC family protein 30335..30976 Listeria monocytogenes serotype 4b str. F2365 2799362 YP_012642.1 CDS LMOf2365_0030 NC_002973.6 31181 33085 D identified by similarity to SP:P08722; match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830; PTS system beta-glucoside-specific transporter subunit IIABC 31181..33085 Listeria monocytogenes serotype 4b str. F2365 2797316 YP_012643.1 CDS LMOf2365_0031 NC_002973.6 33167 34042 D identified by similarity to OMNI:NTL01LI0027; match to protein family HMM PF02016; hypothetical protein 33167..34042 Listeria monocytogenes serotype 4b str. F2365 2798864 YP_012644.1 CDS LMOf2365_0032 NC_002973.6 34191 34811 R hypothetical protein complement(34191..34811) Listeria monocytogenes serotype 4b str. F2365 2797341 YP_012645.1 CDS LMOf2365_0034 NC_002973.6 35448 36170 R identified by similarity to SP:P37493; hypothetical protein complement(35448..36170) Listeria monocytogenes serotype 4b str. F2365 2799588 YP_012646.1 CDS LMOf2365_0035 NC_002973.6 36172 36885 R hypothetical protein complement(36172..36885) Listeria monocytogenes serotype 4b str. F2365 2797428 YP_012647.1 CDS LMOf2365_0036 NC_002973.6 36872 37636 R identified by similarity to SP:P37491; hypothetical protein complement(36872..37636) Listeria monocytogenes serotype 4b str. F2365 2799058 YP_012648.1 CDS LMOf2365_0037 NC_002973.6 37707 38156 R identified by similarity to SP:P37490; hypothetical protein complement(37707..38156) Listeria monocytogenes serotype 4b str. F2365 2799361 YP_012649.1 CDS LMOf2365_0038 NC_002973.6 38379 38717 D identified by similarity to OMNI:NTL01LI0028; hypothetical protein 38379..38717 Listeria monocytogenes serotype 4b str. F2365 2797013 YP_012650.1 CDS LMOf2365_0039 NC_002973.6 38754 39563 R identified by similarity to GP:16412450; match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD superfamily hydrolase complement(38754..39563) Listeria monocytogenes serotype 4b str. F2365 2798854 YP_012651.1 CDS LMOf2365_0040 NC_002973.6 39580 40635 R identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator complement(39580..40635) Listeria monocytogenes serotype 4b str. F2365 2798594 YP_012652.1 CDS LMOf2365_0041 NC_002973.6 40837 41802 D identified by match to protein family HMM PF00480; ROK family protein 40837..41802 Listeria monocytogenes serotype 4b str. F2365 2799353 YP_012653.1 CDS LMOf2365_0042 NC_002973.6 41799 44201 D glycosyl hydrolase 41799..44201 Listeria monocytogenes serotype 4b str. F2365 2799354 YP_012654.1 CDS LMOf2365_0043 NC_002973.6 44214 45572 D identified by similarity to SP:P46317; match to protein family HMM PF02378; match to protein family HMM TIGR00410; PTS system beta-glucoside-specific transporter subunit IIC 44214..45572 Listeria monocytogenes serotype 4b str. F2365 2798815 YP_012655.1 CDS LMOf2365_0044 NC_002973.6 45574 46659 D identified by similarity to OMNI:NTL01LI0034; match to protein family HMM PF01380; SIS domain-containing protein 45574..46659 Listeria monocytogenes serotype 4b str. F2365 2799586 YP_012656.1 CDS argF-1 NC_002973.6 46891 47916 D catalyzes the formation of putrescine from carbamoyl-putrescine during agmatine degradation; putrescine carbamoyltransferase 46891..47916 Listeria monocytogenes serotype 4b str. F2365 2799360 YP_012657.1 CDS LMOf2365_0046 NC_002973.6 47989 49374 D identified by match to protein family HMM PF00324; amino acid permease 47989..49374 Listeria monocytogenes serotype 4b str. F2365 2799359 YP_012658.1 CDS LMOf2365_0047 NC_002973.6 49361 50455 D catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase 49361..50455 Listeria monocytogenes serotype 4b str. F2365 2798863 YP_012659.1 CDS arcC NC_002973.6 50468 51409 D catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 50468..51409 Listeria monocytogenes serotype 4b str. F2365 2798862 YP_012660.1 CDS LMOf2365_0049 NC_002973.6 51510 52619 D catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase 51510..52619 Listeria monocytogenes serotype 4b str. F2365 2798636 YP_012661.1 CDS LMOf2365_0050 NC_002973.6 52636 53415 D phosphosugar-binding protein 52636..53415 Listeria monocytogenes serotype 4b str. F2365 2799456 YP_012662.1 CDS LMOf2365_0051 NC_002973.6 53519 54178 D identified by similarity to SP:P09548; match to protein family HMM PF00597; DedA family protein 53519..54178 Listeria monocytogenes serotype 4b str. F2365 2799356 YP_012663.1 CDS arcA NC_002973.6 54257 55489 D catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 54257..55489 Listeria monocytogenes serotype 4b str. F2365 2799357 YP_012664.1 CDS rpsF NC_002973.6 55768 56061 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 55768..56061 Listeria monocytogenes serotype 4b str. F2365 2798861 YP_012665.1 CDS ssb-1 NC_002973.6 56117 56653 D identified by similarity to SP:P37455; match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein 56117..56653 Listeria monocytogenes serotype 4b str. F2365 2799368 YP_012666.1 CDS rpsR NC_002973.6 56697 56936 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 56697..56936 Listeria monocytogenes serotype 4b str. F2365 2799465 YP_012667.1 CDS LMOf2365_0056 NC_002973.6 57089 57700 D lipoprotein 57089..57700 Listeria monocytogenes serotype 4b str. F2365 2798344 YP_012668.1 CDS LMOf2365_0057 NC_002973.6 57957 58571 D essential for production of a quorum sensing autoinducing peptide; accessory gene regulator protein 57957..58571 Listeria monocytogenes serotype 4b str. F2365 2799371 YP_012669.1 CDS LMOf2365_0058 NC_002973.6 58564 58716 D identified by similarity to OMNI:NTL01LI0042; accessory gene regulator protein D 58564..58716 Listeria monocytogenes serotype 4b str. F2365 2798317 YP_012670.1 CDS agrC NC_002973.6 58812 60107 D identified by similarity to GP:1916243; match to protein family HMM PF02518; accessory gene regulator protein C 58812..60107 Listeria monocytogenes serotype 4b str. F2365 2798816 YP_012671.1 CDS agrA NC_002973.6 60126 60854 D identified by similarity to SP:P13131; match to protein family HMM PF00072; match to protein family HMM PF04397; accessory gene regulator protein A 60126..60854 Listeria monocytogenes serotype 4b str. F2365 2798696 YP_012672.1 CDS LMOf2365_0061 NC_002973.6 61021 62994 D identified by match to protein family HMM PF01368; match to protein family HMM PF02272; DHH subfamily 1 protein 61021..62994 Listeria monocytogenes serotype 4b str. F2365 2798817 YP_012673.1 CDS rplI NC_002973.6 62997 63443 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 62997..63443 Listeria monocytogenes serotype 4b str. F2365 2798396 YP_012674.1 CDS dnaB NC_002973.6 63468 64820 D unwinds double stranded DNA; replicative DNA helicase 63468..64820 Listeria monocytogenes serotype 4b str. F2365 2799358 YP_012675.1 CDS LMOf2365_0064 NC_002973.6 64876 65025 D hypothetical protein 64876..65025 Listeria monocytogenes serotype 4b str. F2365 2799367 YP_012676.1 CDS purA NC_002973.6 65079 66371 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 65079..66371 Listeria monocytogenes serotype 4b str. F2365 2797594 YP_012677.1 CDS LMOf2365_0066 NC_002973.6 66420 66572 D hypothetical protein 66420..66572 Listeria monocytogenes serotype 4b str. F2365 2798859 YP_012678.1 CDS LMOf2365_0067 NC_002973.6 66674 66967 D identified by similarity to OMNI:NTL01LI0049; match to protein family HMM PF06013; hypothetical protein 66674..66967 Listeria monocytogenes serotype 4b str. F2365 2798700 YP_012679.1 CDS LMOf2365_0068 NC_002973.6 67116 70322 D identified by match to protein family HMM TIGR01612; hypothetical protein 67116..70322 Listeria monocytogenes serotype 4b str. F2365 2798858 YP_012680.1 CDS LMOf2365_0069 NC_002973.6 70312 70827 D identified by similarity to OMNI:NTL01LI0051; hypothetical protein 70312..70827 Listeria monocytogenes serotype 4b str. F2365 2799370 YP_012681.1 CDS LMOf2365_0070 NC_002973.6 70845 71096 D identified by similarity to OMNI:NTL01LI0052; hypothetical protein 70845..71096 Listeria monocytogenes serotype 4b str. F2365 2798860 YP_012682.1 CDS LMOf2365_0071 NC_002973.6 71118 72314 D identified by similarity to OMNI:NTL01LI0053; hypothetical protein 71118..72314 Listeria monocytogenes serotype 4b str. F2365 2798855 YP_012683.1 CDS LMOf2365_0072 NC_002973.6 72328 76821 D identified by match to protein family HMM PF01580; match to protein family HMM TIGR01612; diarrheal toxin/FtsK/SpoIIIE family protein 72328..76821 Listeria monocytogenes serotype 4b str. F2365 2798020 YP_012684.1 CDS LMOf2365_0073 NC_002973.6 76841 77236 D hypothetical protein 76841..77236 Listeria monocytogenes serotype 4b str. F2365 2799352 YP_012685.1 CDS LMOf2365_0074 NC_002973.6 77229 77528 D identified by similarity to OMNI:NTL01LI0056; hypothetical protein 77229..77528 Listeria monocytogenes serotype 4b str. F2365 2799355 YP_012686.1 CDS LMOf2365_0075 NC_002973.6 77525 78226 D identified by similarity to OMNI:NTL01LI0057; hypothetical protein 77525..78226 Listeria monocytogenes serotype 4b str. F2365 2798857 YP_012687.1 CDS LMOf2365_0076 NC_002973.6 78227 78559 D identified by similarity to OMNI:NTL01LI0058; hypothetical protein 78227..78559 Listeria monocytogenes serotype 4b str. F2365 2798851 YP_012688.1 CDS LMOf2365_0077 NC_002973.6 78573 80249 D identified by similarity to OMNI:NTL01LI0059; hypothetical protein 78573..80249 Listeria monocytogenes serotype 4b str. F2365 2798135 YP_012689.1 CDS LMOf2365_0078 NC_002973.6 80262 80651 D identified by similarity to OMNI:NTL01LI0063; hypothetical protein 80262..80651 Listeria monocytogenes serotype 4b str. F2365 2798272 YP_012690.1 CDS LMOf2365_0079 NC_002973.6 80789 81199 D identified by similarity to OMNI:NTL01LI0064; hypothetical protein 80789..81199 Listeria monocytogenes serotype 4b str. F2365 2799174 YP_012691.1 CDS LMOf2365_0080 NC_002973.6 81384 81638 D hypothetical protein 81384..81638 Listeria monocytogenes serotype 4b str. F2365 2797991 YP_012692.1 CDS LMOf2365_0081 NC_002973.6 81770 82093 D identified by similarity to GP:19715005; hypothetical protein 81770..82093 Listeria monocytogenes serotype 4b str. F2365 2798856 YP_012693.1 CDS LMOf2365_0082 NC_002973.6 82350 84047 D identified by similarity to OMNI:NTL01LI0059; hypothetical protein 82350..84047 Listeria monocytogenes serotype 4b str. F2365 2798541 YP_012694.1 CDS LMOf2365_0083 NC_002973.6 84049 84483 D identified by similarity to SP:P40737; hypothetical protein 84049..84483 Listeria monocytogenes serotype 4b str. F2365 2798514 YP_012695.1 CDS LMOf2365_0084 NC_002973.6 84907 85617 D hypothetical protein 84907..85617 Listeria monocytogenes serotype 4b str. F2365 2799137 YP_012696.1 CDS LMOf2365_0085 NC_002973.6 85618 85941 D hypothetical protein 85618..85941 Listeria monocytogenes serotype 4b str. F2365 2799350 YP_012697.1 CDS LMOf2365_0086 NC_002973.6 86108 86401 D hypothetical protein 86108..86401 Listeria monocytogenes serotype 4b str. F2365 2798496 YP_012698.1 CDS LMOf2365_0087 NC_002973.6 86538 87260 D hypothetical protein 86538..87260 Listeria monocytogenes serotype 4b str. F2365 2798401 YP_012699.1 CDS LMOf2365_0088 NC_002973.6 87500 87682 D hypothetical protein 87500..87682 Listeria monocytogenes serotype 4b str. F2365 2798536 YP_012700.1 CDS LMOf2365_0089 NC_002973.6 88139 88240 D hypothetical protein 88139..88240 Listeria monocytogenes serotype 4b str. F2365 2799114 YP_012701.1 CDS LMOf2365_0090 NC_002973.6 88367 88651 D hypothetical protein 88367..88651 Listeria monocytogenes serotype 4b str. F2365 2798492 YP_012702.1 CDS LMOf2365_0091 NC_002973.6 88639 89088 D hypothetical protein 88639..89088 Listeria monocytogenes serotype 4b str. F2365 2799156 YP_012703.1 CDS LMOf2365_0092 NC_002973.6 89326 90099 D identified by similarity to SP:P11435; transferase 89326..90099 Listeria monocytogenes serotype 4b str. F2365 2799112 YP_012704.1 CDS ada NC_002973.6 90096 91148 D identified by similarity to SP:P06134; match to protein family HMM PF01035; match to protein family HMM PF02805; match to protein family HMM TIGR00589; Ada regulatory protein 90096..91148 Listeria monocytogenes serotype 4b str. F2365 2798464 YP_012705.1 CDS LMOf2365_0094 NC_002973.6 91170 91883 R identified by match to protein family HMM PF00805; pentapeptide repeat-containing protein complement(91170..91883) Listeria monocytogenes serotype 4b str. F2365 2798471 YP_012706.1 CDS LMOf2365_0095 NC_002973.6 91939 92895 D identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase 91939..92895 Listeria monocytogenes serotype 4b str. F2365 2798505 YP_012707.1 CDS LMOf2365_0096 NC_002973.6 93236 94759 D identified by similarity to GP:16412606; hypothetical protein 93236..94759 Listeria monocytogenes serotype 4b str. F2365 2799351 YP_012708.1 CDS LMOf2365_0097 NC_002973.6 94741 95118 D hypothetical protein 94741..95118 Listeria monocytogenes serotype 4b str. F2365 2799128 YP_012709.1 CDS LMOf2365_0098 NC_002973.6 95591 95935 D hypothetical protein 95591..95935 Listeria monocytogenes serotype 4b str. F2365 2799200 YP_012710.1 CDS LMOf2365_0099 NC_002973.6 96061 96402 D hypothetical protein 96061..96402 Listeria monocytogenes serotype 4b str. F2365 2799347 YP_012711.1 CDS LMOf2365_0100 NC_002973.6 96469 96837 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(96469..96837) Listeria monocytogenes serotype 4b str. F2365 2798457 YP_012712.1 CDS LMOf2365_0101 NC_002973.6 96893 97876 R identified by match to protein family HMM PF00248; aldo/keto reductase oxidoreductase complement(96893..97876) Listeria monocytogenes serotype 4b str. F2365 2798447 YP_012713.1 CDS LMOf2365_0102 NC_002973.6 98267 98956 D identified by similarity to OMNI:NTL01LI0129; hypothetical protein 98267..98956 Listeria monocytogenes serotype 4b str. F2365 2797834 YP_012714.1 CDS LMOf2365_0103 NC_002973.6 99033 104912 D identified by similarity to GP:16412551; match to protein family HMM TIGR01612; hypothetical protein 99033..104912 Listeria monocytogenes serotype 4b str. F2365 2797978 YP_012715.1 CDS LMOf2365_0104 NC_002973.6 104909 107218 D identified by similarity to OMNI:NTL01LI0131; hypothetical protein 104909..107218 Listeria monocytogenes serotype 4b str. F2365 2799349 YP_012716.1 CDS LMOf2365_0105 NC_002973.6 107275 107517 D identified by similarity to SP:Q05366; match to protein family HMM PF00137; ATP synthase F0, C subunit family protein 107275..107517 Listeria monocytogenes serotype 4b str. F2365 2799346 YP_012717.1 CDS LMOf2365_0106 NC_002973.6 107529 108560 D ATP synthase F1 subunit delta 107529..108560 Listeria monocytogenes serotype 4b str. F2365 2799348 YP_012718.1 CDS atpA-1 NC_002973.6 108557 110053 D produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 108557..110053 Listeria monocytogenes serotype 4b str. F2365 2797983 YP_012719.1 CDS LMOf2365_0108 NC_002973.6 110050 110919 D identified by match to protein family HMM PF00231; ATP synthase F1 subunit gamma 110050..110919 Listeria monocytogenes serotype 4b str. F2365 2799344 YP_012720.1 CDS atpD-1 NC_002973.6 110920 112290 D produces ATP from ADP in the presence of a proton gradient across the membrane; the beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 110920..112290 Listeria monocytogenes serotype 4b str. F2365 2799343 YP_012721.1 CDS LMOf2365_0110 NC_002973.6 112303 112635 D identified by match to protein family HMM PF02823; ATP synthase F1 subunit epsilon 112303..112635 Listeria monocytogenes serotype 4b str. F2365 2799345 YP_012722.1 CDS LMOf2365_0111 NC_002973.6 112616 113176 D identified by similarity to OMNI:NTL01LI0138; hypothetical protein 112616..113176 Listeria monocytogenes serotype 4b str. F2365 2797764 YP_012723.1 CDS LMOf2365_0112 NC_002973.6 113351 113983 D identified by similarity to OMNI:NTL01LI0140; hypothetical protein 113351..113983 Listeria monocytogenes serotype 4b str. F2365 2797763 YP_012724.1 CDS manL NC_002973.6 114281 115246 D identified by similarity to GP:5669855; match to protein family HMM PF03610; match to protein family HMM PF03830; match to protein family HMM TIGR00824; PTS system mannose-specific transporter subunit IIAB 114281..115246 Listeria monocytogenes serotype 4b str. F2365 2797805 YP_012725.1 CDS LMOf2365_0114 NC_002973.6 115270 116076 D identified by similarity to SP:P08187; match to protein family HMM PF03609; PTS system mannose/fructose/sorbose family transporter subunit IIC 115270..116076 Listeria monocytogenes serotype 4b str. F2365 2799746 YP_012726.1 CDS LMOf2365_0115 NC_002973.6 116098 117009 D identified by similarity to SP:P08188; match to protein family HMM PF03613; match to protein family HMM TIGR00828; PTS system mannose/fructose/sorbose family transporter subunit IID 116098..117009 Listeria monocytogenes serotype 4b str. F2365 2797982 YP_012727.1 CDS LMOf2365_0116 NC_002973.6 117136 117525 D identified by similarity to GP:16412565; match to protein family HMM PF06115; hypothetical protein 117136..117525 Listeria monocytogenes serotype 4b str. F2365 2797688 YP_012728.1 CDS LMOf2365_0117 NC_002973.6 117647 117997 D identified by similarity to OMNI:NTL01LI0145; hypothetical protein 117647..117997 Listeria monocytogenes serotype 4b str. F2365 2797781 YP_012729.1 CDS LMOf2365_0118 NC_002973.6 118038 119555 R hypothetical protein complement(118038..119555) Listeria monocytogenes serotype 4b str. F2365 2797660 YP_012730.1 CDS LMOf2365_0119 NC_002973.6 119670 119963 R identified by match to protein family HMM PF01022; ArsR family transcriptional regulator complement(119670..119963) Listeria monocytogenes serotype 4b str. F2365 2797848 YP_012731.1 CDS LMOf2365_0120 NC_002973.6 120075 120365 D identified by match to protein family HMM PF02619; match to protein family HMM PF03992; YneC family protein 120075..120365 Listeria monocytogenes serotype 4b str. F2365 2797985 YP_012732.1 CDS LMOf2365_0121 NC_002973.6 120379 121011 D identified by match to protein family HMM PF00881; nitroreductase 120379..121011 Listeria monocytogenes serotype 4b str. F2365 2797995 YP_012733.1 CDS LMOf2365_0122 NC_002973.6 121107 121478 D identified by similarity to OMNI:NTL01LI0150; hypothetical protein 121107..121478 Listeria monocytogenes serotype 4b str. F2365 2797655 YP_012734.1 CDS chiB NC_002973.6 121757 124039 D identified by similarity to GP:2696017; match to protein family HMM PF00041; match to protein family HMM PF00704; match to protein family HMM PF02839; chitinase B 121757..124039 Listeria monocytogenes serotype 4b str. F2365 2797877 YP_012735.1 CDS LMOf2365_0124 NC_002973.6 124142 125044 D identified by similarity to OMNI:NTL01LI0765; match to protein family HMM PF00480; ROK family protein 124142..125044 Listeria monocytogenes serotype 4b str. F2365 2797989 YP_012736.1 CDS LMOf2365_0125 NC_002973.6 125069 126850 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(125069..126850) Listeria monocytogenes serotype 4b str. F2365 2798132 YP_012737.1 CDS LMOf2365_0126 NC_002973.6 126843 128609 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(126843..128609) Listeria monocytogenes serotype 4b str. F2365 2798003 YP_012738.1 CDS LMOf2365_0127 NC_002973.6 128728 129561 D identified by match to protein family HMM PF00165; match to protein family HMM PF02311; AraC family transcriptional regulator 128728..129561 Listeria monocytogenes serotype 4b str. F2365 2797388 YP_012739.1 CDS LMOf2365_0128 NC_002973.6 129704 130711 D identified by similarity to GP:2853612; lipase 129704..130711 Listeria monocytogenes serotype 4b str. F2365 2798118 YP_012740.1 CDS LMOf2365_0129 NC_002973.6 130827 131525 D identified by match to protein family HMM PF00563; EAL domain-containing protein 130827..131525 Listeria monocytogenes serotype 4b str. F2365 2797987 YP_012741.1 CDS LMOf2365_0130 NC_002973.6 131495 132190 R identified by similarity to OMNI:NTL01LI0157; hypothetical protein complement(131495..132190) Listeria monocytogenes serotype 4b str. F2365 2798127 YP_012742.1 CDS LMOf2365_0131 NC_002973.6 132409 132870 R identified by match to protein family HMM PF06114; hypothetical protein complement(132409..132870) Listeria monocytogenes serotype 4b str. F2365 2798265 YP_012743.1 CDS LMOf2365_0132 NC_002973.6 132867 133202 R identified by match to protein family HMM PF01381; repressor protein complement(132867..133202) Listeria monocytogenes serotype 4b str. F2365 2798123 YP_012744.1 CDS lmaD NC_002973.6 133419 133847 D antigen D 133419..133847 Listeria monocytogenes serotype 4b str. F2365 2798267 YP_012745.1 CDS lmaC NC_002973.6 133859 134275 D identified by match to protein family HMM TIGR01637; antigen C 133859..134275 Listeria monocytogenes serotype 4b str. F2365 2799784 YP_012746.1 CDS lmaB NC_002973.6 134555 134944 D identified by similarity to OMNI:NTL01LM0117; antigen B 134555..134944 Listeria monocytogenes serotype 4b str. F2365 2797997 YP_012747.1 CDS lmaA NC_002973.6 134957 135469 D identified by similarity to OMNI:NTL01LM0118; antigen A 134957..135469 Listeria monocytogenes serotype 4b str. F2365 2798001 YP_012748.1 CDS LMOf2365_0137 NC_002973.6 135517 135819 D identified by similarity to OMNI:NTL01LI0164; hypothetical protein 135517..135819 Listeria monocytogenes serotype 4b str. F2365 2797993 YP_012749.1 CDS LMOf2365_0138 NC_002973.6 135861 136265 D identified by similarity to OMNI:NTL01LI0165; hypothetical protein 135861..136265 Listeria monocytogenes serotype 4b str. F2365 2799790 YP_012750.1 CDS LMOf2365_0139 NC_002973.6 136252 138120 D identified by similarity to OMNI:NTL01LI0166; hypothetical protein 136252..138120 Listeria monocytogenes serotype 4b str. F2365 2799837 YP_012751.1 CDS LMOf2365_0140 NC_002973.6 138117 138935 D identified by similarity to OMNI:NTL01LI0167; hypothetical protein 138117..138935 Listeria monocytogenes serotype 4b str. F2365 2799839 YP_012752.1 CDS LMOf2365_0141 NC_002973.6 138945 140081 D identified by match to protein family HMM TIGR01665; minor structural protein 138945..140081 Listeria monocytogenes serotype 4b str. F2365 2798005 YP_012753.1 CDS LMOf2365_0142 NC_002973.6 140071 140370 D identified by similarity to OMNI:NTL01LI0169; hypothetical protein 140071..140370 Listeria monocytogenes serotype 4b str. F2365 2799825 YP_012754.1 CDS LMOf2365_0143 NC_002973.6 140385 140960 D identified by similarity to OMNI:NTL01LI0170; hypothetical protein 140385..140960 Listeria monocytogenes serotype 4b str. F2365 2798836 YP_012755.1 CDS LMOf2365_0144 NC_002973.6 140975 141454 D identified by similarity to OMNI:NTL01LI0171; hypothetical protein 140975..141454 Listeria monocytogenes serotype 4b str. F2365 2798834 YP_012756.1 CDS LMOf2365_0145 NC_002973.6 141451 141987 D identified by similarity to OMNI:NTL01LI0172; hypothetical protein 141451..141987 Listeria monocytogenes serotype 4b str. F2365 2798841 YP_012757.1 CDS LMOf2365_0146 NC_002973.6 142006 142428 D identified by match to protein family HMM PF05105; match to protein family HMM TIGR01593; holin 142006..142428 Listeria monocytogenes serotype 4b str. F2365 2798835 YP_012758.1 CDS LMOf2365_0147 NC_002973.6 142409 143137 D identified by similarity to OMNI:NTL01LI0174; match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase 142409..143137 Listeria monocytogenes serotype 4b str. F2365 2798837 YP_012759.1 CDS LMOf2365_0148 NC_002973.6 143175 145523 R identified by match to protein family HMM PF00149; match to protein family HMM PF00746; match to protein family HMM PF02872; match to protein family HMM TIGR01167; Ser/Thr protein phosphatase complement(143175..145523) Listeria monocytogenes serotype 4b str. F2365 2798008 YP_012760.1 CDS LMOf2365_0149 NC_002973.6 145717 146466 D identified by match to protein family HMM PF00563; EAL domain-containing protein 145717..146466 Listeria monocytogenes serotype 4b str. F2365 2798840 YP_012761.1 CDS LMOf2365_0150 NC_002973.6 146536 148044 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase complement(146536..148044) Listeria monocytogenes serotype 4b str. F2365 2798012 YP_012762.1 CDS LMOf2365_0151 NC_002973.6 148211 148444 D hypothetical protein 148211..148444 Listeria monocytogenes serotype 4b str. F2365 2798838 YP_012763.1 CDS LMOf2365_0152 NC_002973.6 148456 148734 D identified by match to protein family HMM PF00583; acetyltransferase 148456..148734 Listeria monocytogenes serotype 4b str. F2365 2798839 YP_012764.1 CDS LMOf2365_0153 NC_002973.6 149060 150634 D identified by similarity to SP:P42061; match to protein family HMM PF00496; oligopeptide ABC transporter substrate-binding protein 149060..150634 Listeria monocytogenes serotype 4b str. F2365 2798844 YP_012765.1 CDS LMOf2365_0154 NC_002973.6 150736 151686 D identified by similarity to SP:P42062; match to protein family HMM PF00528; oligopeptide ABC transporter permease 150736..151686 Listeria monocytogenes serotype 4b str. F2365 2798010 YP_012766.1 CDS LMOf2365_0155 NC_002973.6 151697 152590 D identified by similarity to SP:P42063; match to protein family HMM PF00528; oligopeptide ABC transporter permease 151697..152590 Listeria monocytogenes serotype 4b str. F2365 2798848 YP_012767.1 CDS LMOf2365_0156 NC_002973.6 152790 153074 D identified by similarity to OMNI:NTL01LI0183; hypothetical protein 152790..153074 Listeria monocytogenes serotype 4b str. F2365 2798843 YP_012768.1 CDS LMOf2365_0157 NC_002973.6 153075 153443 D identified by similarity to OMNI:NTL01LI0184; hypothetical protein 153075..153443 Listeria monocytogenes serotype 4b str. F2365 2798846 YP_012769.1 CDS LMOf2365_0159 NC_002973.6 154753 154995 D identified by similarity to GP:19712958; hypothetical protein 154753..154995 Listeria monocytogenes serotype 4b str. F2365 2798852 YP_012770.1 CDS LMOf2365_0160 NC_002973.6 155016 155459 D hypothetical protein 155016..155459 Listeria monocytogenes serotype 4b str. F2365 2798847 YP_012771.1 CDS LMOf2365_0161 NC_002973.6 155691 155927 D hypothetical protein 155691..155927 Listeria monocytogenes serotype 4b str. F2365 2798853 YP_012772.1 CDS LMOf2365_0162 NC_002973.6 155933 156166 D identified by similarity to GP:15622581; hypothetical protein 155933..156166 Listeria monocytogenes serotype 4b str. F2365 2798849 YP_012773.1 CDS LMOf2365_0163 NC_002973.6 156477 156581 D hypothetical protein 156477..156581 Listeria monocytogenes serotype 4b str. F2365 2798850 YP_012774.1 CDS LMOf2365_0164 NC_002973.6 156716 156865 D hypothetical protein 156716..156865 Listeria monocytogenes serotype 4b str. F2365 2798784 YP_012775.1 CDS LMOf2365_0165 NC_002973.6 157006 157377 D hypothetical protein 157006..157377 Listeria monocytogenes serotype 4b str. F2365 2798798 YP_012776.1 CDS LMOf2365_0166 NC_002973.6 157421 157732 D hypothetical protein 157421..157732 Listeria monocytogenes serotype 4b str. F2365 2798803 YP_012777.1 CDS LMOf2365_0167 NC_002973.6 157865 159520 R identified by match to protein family HMM PF00496; solute-binding family 5 protein complement(157865..159520) Listeria monocytogenes serotype 4b str. F2365 2799587 YP_012778.1 CDS LMOf2365_0168 NC_002973.6 159743 160684 D identified by similarity to SP:O05703; match to protein family HMM PF01297; zinc ABC transporter substrate-binding protein 159743..160684 Listeria monocytogenes serotype 4b str. F2365 2798790 YP_012779.1 CDS zurA-1 NC_002973.6 160697 161401 D identified by similarity to SP:Q9XDA6; match to protein family HMM PF00005; zinc ABC transporter ATP-binding protein 160697..161401 Listeria monocytogenes serotype 4b str. F2365 2798770 YP_012780.1 CDS zurM-1 NC_002973.6 161350 162156 D identified by similarity to SP:P39832; match to protein family HMM PF00950; zinc ABC transporter permease 161350..162156 Listeria monocytogenes serotype 4b str. F2365 2799609 YP_012781.1 CDS LMOf2365_0171 NC_002973.6 162160 162840 R cyclic nucleotide-binding protein complement(162160..162840) Listeria monocytogenes serotype 4b str. F2365 2799582 YP_012782.1 CDS LMOf2365_0172 NC_002973.6 163118 165457 D hypothetical protein 163118..165457 Listeria monocytogenes serotype 4b str. F2365 2798762 YP_012783.1 CDS LMOf2365_0173 NC_002973.6 165502 166314 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; cof family hydrolase 165502..166314 Listeria monocytogenes serotype 4b str. F2365 2799585 YP_012784.1 CDS LMOf2365_0174 NC_002973.6 166599 168668 D identified by match to protein family HMM PF05737; match to protein family HMM PF05738; match to protein family HMM TIGR01167; cell wall surface anchor family protein 166599..168668 Listeria monocytogenes serotype 4b str. F2365 2798733 YP_012785.1 CDS LMOf2365_0175 NC_002973.6 168859 170601 D identified by match to protein family HMM PF05737; match to protein family HMM PF05738; hypothetical protein 168859..170601 Listeria monocytogenes serotype 4b str. F2365 2798027 YP_012786.1 CDS LMOf2365_0176 NC_002973.6 170645 171481 R identified by match to protein family HMM PF01740; STAS domain-containing protein complement(170645..171481) Listeria monocytogenes serotype 4b str. F2365 2798023 YP_012787.1 CDS holB NC_002973.6 171698 172690 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 171698..172690 Listeria monocytogenes serotype 4b str. F2365 2798714 YP_012788.1 CDS LMOf2365_0178 NC_002973.6 172696 173529 D identified by similarity to OMNI:NTL01LI0204; match to protein family HMM PF04468; hypothetical protein 172696..173529 Listeria monocytogenes serotype 4b str. F2365 2799459 YP_012789.1 CDS LMOf2365_0179 NC_002973.6 173540 173929 D in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA; DNA replication intiation control protein YabA 173540..173929 Listeria monocytogenes serotype 4b str. F2365 2798651 YP_012790.1 CDS LMOf2365_0180 NC_002973.6 173978 174739 D identified by similarity to SP:P37543; hypothetical protein 173978..174739 Listeria monocytogenes serotype 4b str. F2365 2799460 YP_012791.1 CDS LMOf2365_0181 NC_002973.6 174723 174992 D identified by similarity to OMNI:EF2693; match to protein family HMM PF01541; GIY-YIG nuclease superfamily protein 174723..174992 Listeria monocytogenes serotype 4b str. F2365 2799458 YP_012792.1 CDS LMOf2365_0182 NC_002973.6 174989 175870 D identified by similarity to GP:16412629; match to protein family HMM PF00590; match to protein family HMM TIGR00096; tetrapyrrole methylase 174989..175870 Listeria monocytogenes serotype 4b str. F2365 2798678 YP_012793.1 CDS LMOf2365_0183 NC_002973.6 175915 176199 R identified by similarity to SP:P08874; match to protein family HMM PF04014; match to protein family HMM TIGR01439; transition state regulatory protein AbrB complement(175915..176199) Listeria monocytogenes serotype 4b str. F2365 2798662 YP_012794.1 CDS LMOf2365_0184 NC_002973.6 176313 177170 D identified by similarity to GP:2226001; glucose uptake protein 176313..177170 Listeria monocytogenes serotype 4b str. F2365 2798625 YP_012795.1 CDS LMOf2365_0185 NC_002973.6 177238 178500 D identified by similarity to OMNI:NTL01LI0211; hypothetical protein 177238..178500 Listeria monocytogenes serotype 4b str. F2365 2799464 YP_012796.1 CDS LMOf2365_0186 NC_002973.6 178648 179913 R identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein complement(178648..179913) Listeria monocytogenes serotype 4b str. F2365 2798629 YP_012797.1 CDS LMOf2365_0187 NC_002973.6 180191 181051 D identified by similarity to GP:2226001; glucose uptake protein 180191..181051 Listeria monocytogenes serotype 4b str. F2365 2798031 YP_012798.1 CDS metG NC_002973.6 181120 183117 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 181120..183117 Listeria monocytogenes serotype 4b str. F2365 2798033 YP_012799.1 CDS LMOf2365_0189 NC_002973.6 183281 184495 D identified by similarity to SP:P16557; match to protein family HMM PF00480; xylose repressor protein 183281..184495 Listeria monocytogenes serotype 4b str. F2365 2798614 YP_012800.1 CDS LMOf2365_0190 NC_002973.6 184531 185409 D identified by match to protein family HMM PF00528; sugar ABC transporter permease 184531..185409 Listeria monocytogenes serotype 4b str. F2365 2798602 YP_012801.1 CDS LMOf2365_0191 NC_002973.6 185409 186257 D identified by match to protein family HMM PF00528; sugar ABC transporter permease 185409..186257 Listeria monocytogenes serotype 4b str. F2365 2798565 YP_012802.1 CDS LMOf2365_0192 NC_002973.6 186285 187541 D identified by match to protein family HMM PF01547; sugar ABC transporter substrate-binding protein 186285..187541 Listeria monocytogenes serotype 4b str. F2365 2798573 YP_012803.1 CDS LMOf2365_0193 NC_002973.6 187624 190926 D identified by match to protein family HMM PF01055; glycosyl hydrolase 187624..190926 Listeria monocytogenes serotype 4b str. F2365 2798587 YP_012804.1 CDS LMOf2365_0194 NC_002973.6 190929 193220 D identified by similarity to SP:Q9F234; match to protein family HMM PF01055; alpha-glucosidase 190929..193220 Listeria monocytogenes serotype 4b str. F2365 2797947 YP_012805.1 CDS malL-1 NC_002973.6 193224 194885 D identified by similarity to SP:P21332; match to protein family HMM PF00128; oligo-1,6-glucosidase 193224..194885 Listeria monocytogenes serotype 4b str. F2365 2797956 YP_012806.1 CDS LMOf2365_0196 NC_002973.6 194958 195755 D identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; TatD family deoxyribonuclease 194958..195755 Listeria monocytogenes serotype 4b str. F2365 2799712 YP_012807.1 CDS LMOf2365_0197 NC_002973.6 196047 197273 D identified by similarity to SP:P37546; match to protein family HMM PF03990; hypothetical protein 196047..197273 Listeria monocytogenes serotype 4b str. F2365 2797968 YP_012808.1 CDS LMOf2365_0198 NC_002973.6 197375 197950 D identified by similarity to OMNI:NTL01LI0224; match to protein family HMM PF01751; match to protein family HMM TIGR00334; primase-like protein 197375..197950 Listeria monocytogenes serotype 4b str. F2365 2799040 YP_012809.1 CDS ksgA NC_002973.6 197943 198830 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 197943..198830 Listeria monocytogenes serotype 4b str. F2365 2798558 YP_012810.1 CDS LMOf2365_0200 NC_002973.6 198950 199207 D identified by similarity to SP:P37466; match to protein family HMM PF06257; hypothetical protein 198950..199207 Listeria monocytogenes serotype 4b str. F2365 2797525 YP_012811.1 CDS ipk NC_002973.6 199346 200227 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 199346..200227 Listeria monocytogenes serotype 4b str. F2365 2797452 YP_012812.1 CDS LMOf2365_0202 NC_002973.6 200249 200986 D identified by similarity to OMNI:VC1285; match to protein family HMM PF04794; hypothetical protein 200249..200986 Listeria monocytogenes serotype 4b str. F2365 2797465 YP_012813.1 CDS purR NC_002973.6 201150 201968 D identified by similarity to SP:P37551; match to protein family HMM PF00156; match to protein family HMM TIGR01743; pur operon repressor 201150..201968 Listeria monocytogenes serotype 4b str. F2365 2797973 YP_012814.1 CDS LMOf2365_0204 NC_002973.6 202144 202821 D identified by similarity to OMNI:NTL01LI0230; hypothetical protein 202144..202821 Listeria monocytogenes serotype 4b str. F2365 2797214 YP_012815.1 CDS LMOf2365_0205 NC_002973.6 202870 203562 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 202870..203562 Listeria monocytogenes serotype 4b str. F2365 2797236 YP_012816.1 CDS LMOf2365_0206 NC_002973.6 203559 204767 D identified by match to protein family HMM PF02687; ABC transporter permease 203559..204767 Listeria monocytogenes serotype 4b str. F2365 2797489 YP_012817.1 CDS spoVG-1 NC_002973.6 205451 205759 D stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus; regulatory protein SpoVG 205451..205759 Listeria monocytogenes serotype 4b str. F2365 2797103 YP_012818.1 CDS spoVG-2 NC_002973.6 205878 206186 D stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus; regulatory protein SpoVG 205878..206186 Listeria monocytogenes serotype 4b str. F2365 2797183 YP_012819.1 CDS glmU NC_002973.6 206573 207946 D forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 206573..207946 Listeria monocytogenes serotype 4b str. F2365 2797193 YP_012820.1 CDS prs-1 NC_002973.6 207997 208953 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 207997..208953 Listeria monocytogenes serotype 4b str. F2365 2797245 YP_012821.1 CDS prfA NC_002973.6 208997 209710 R identified by similarity to SP:P22262; listeriolysin regulatory protein complement(208997..209710) Listeria monocytogenes serotype 4b str. F2365 2799457 YP_012822.1 CDS plcA NC_002973.6 209983 210936 R identified by similarity to GP:887021; similarity to SP:P34024; match to protein family HMM PF00388; 1-phosphatidylinositol phosphodiesterase complement(209983..210936) Listeria monocytogenes serotype 4b str. F2365 2797751 YP_012823.1 CDS hly NC_002973.6 211179 212768 D identified by similarity to SP:P13128; match to protein family HMM PF01289; listeriolysin O 211179..212768 Listeria monocytogenes serotype 4b str. F2365 2797098 YP_012824.1 CDS mpl NC_002973.6 213099 214631 D identified by similarity to SP:P34025; match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; zinc metallopeptidase 213099..214631 Listeria monocytogenes serotype 4b str. F2365 2799022 YP_012825.1 CDS actA NC_002973.6 214831 216645 D identified by similarity to SP:P33379; match to protein family HMM PF05058; actin-assembly inducing protein 214831..216645 Listeria monocytogenes serotype 4b str. F2365 2798121 YP_012826.1 CDS plcB NC_002973.6 216708 217550 D identified by similarity to SP:P09598; match to protein family HMM PF00882; phospholipase C 216708..217550 Listeria monocytogenes serotype 4b str. F2365 2797078 YP_012827.1 CDS LMOf2365_0217 NC_002973.6 217622 217945 D identified by similarity to GP:18073184; hypothetical protein 217622..217945 Listeria monocytogenes serotype 4b str. F2365 2797205 YP_012828.1 CDS LMOf2365_0218 NC_002973.6 218078 218539 D lipoprotein 218078..218539 Listeria monocytogenes serotype 4b str. F2365 2797255 YP_012829.1 CDS LMOf2365_0219 NC_002973.6 218592 218924 R identified by similarity to SP:P33382; match to protein family HMM PF01906; hypothetical protein complement(218592..218924) Listeria monocytogenes serotype 4b str. F2365 2798130 YP_012830.1 CDS LMOf2365_0220 NC_002973.6 218991 219674 R identified by similarity to GP:18073204; hypothetical protein complement(218991..219674) Listeria monocytogenes serotype 4b str. F2365 2797353 YP_012831.1 CDS ldh NC_002973.6 219743 220684 R Converts (S)-lactate and NAD(+) to pyruvate and NADH; L-lactate dehydrogenase complement(219743..220684) Listeria monocytogenes serotype 4b str. F2365 2797324 YP_012832.1 CDS LMOf2365_0222 NC_002973.6 220978 221601 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 220978..221601 Listeria monocytogenes serotype 4b str. F2365 2797322 YP_012833.1 CDS LMOf2365_0223 NC_002973.6 221691 222275 D identified by match to protein family HMM PF00583; acetyltransferase 221691..222275 Listeria monocytogenes serotype 4b str. F2365 2797336 YP_012834.1 CDS pth NC_002973.6 222382 222942 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 222382..222942 Listeria monocytogenes serotype 4b str. F2365 2797362 YP_012835.1 CDS mfd NC_002973.6 223056 226595 D identified by similarity to SP:P37474; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM TIGR00580; match to protein family HMM TIGR01612; transcription-repair coupling factor 223056..226595 Listeria monocytogenes serotype 4b str. F2365 2797334 YP_012836.1 CDS LMOf2365_0226 NC_002973.6 226626 228215 D identified by match to protein family HMM PF01943; polysaccharide biosynthesis family protein 226626..228215 Listeria monocytogenes serotype 4b str. F2365 2797084 YP_012837.1 CDS LMOf2365_0227 NC_002973.6 228239 228517 D identified by similarity to SP:P37557; match to protein family HMM PF01479; S4 domain-containing protein 228239..228517 Listeria monocytogenes serotype 4b str. F2365 2797326 YP_012838.1 CDS LMOf2365_0228 NC_002973.6 228746 229132 D identified by similarity to SP:P37471; match to protein family HMM PF04977; cell division protein DivIC 228746..229132 Listeria monocytogenes serotype 4b str. F2365 2797364 YP_012839.1 CDS LMOf2365_0229 NC_002973.6 229283 229711 D identified by match to protein family HMM PF00575; hypothetical protein 229283..229711 Listeria monocytogenes serotype 4b str. F2365 2797347 YP_012840.1 CDS LMOf2365_0230 NC_002973.6 229818 231764 D identified by similarity to GP:467456; match to protein family HMM PF00156; match to protein family HMM PF01171; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase, fusion 229818..231764 Listeria monocytogenes serotype 4b str. F2365 2797333 YP_012841.1 CDS ftsH NC_002973.6 232111 234186 D identified by similarity to SP:P37476; match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM TIGR01241; ATP-dependent metalloprotease FtsH 232111..234186 Listeria monocytogenes serotype 4b str. F2365 2797331 YP_012842.1 CDS LMOf2365_0232 NC_002973.6 234302 235081 D type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 234302..235081 Listeria monocytogenes serotype 4b str. F2365 2797344 YP_012843.1 CDS hslO NC_002973.6 235097 235981 D becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 235097..235981 Listeria monocytogenes serotype 4b str. F2365 2797348 YP_012844.1 CDS cysK NC_002973.6 236097 237023 D identified by similarity to SP:P37887; match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; cysteine synthase A 236097..237023 Listeria monocytogenes serotype 4b str. F2365 2797566 YP_012845.1 CDS LMOf2365_0235 NC_002973.6 237468 237602 D hypothetical protein 237468..237602 Listeria monocytogenes serotype 4b str. F2365 2797068 YP_012846.1 CDS folP NC_002973.6 237674 238741 D identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 237674..238741 Listeria monocytogenes serotype 4b str. F2365 2797093 YP_012847.1 CDS folB NC_002973.6 238755 239129 D identified by match to protein family HMM PF02152; match to protein family HMM TIGR00525; match to protein family HMM TIGR00526; dihydroneopterin aldolase 238755..239129 Listeria monocytogenes serotype 4b str. F2365 2797355 YP_012848.1 CDS folK NC_002973.6 239122 239601 D identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 239122..239601 Listeria monocytogenes serotype 4b str. F2365 2797350 YP_012849.2 CDS LMOf2365_0239 NC_002973.6 239677 240672 D identified by match to protein family HMM PF01207; match to protein family HMM TIGR00737; dihydrouridine synthase 239677..240672 Listeria monocytogenes serotype 4b str. F2365 2798139 YP_012850.1 CDS lysS NC_002973.6 240787 242283 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 240787..242283 Listeria monocytogenes serotype 4b str. F2365 2797289 YP_012851.1 CDS ctsR NC_002973.6 253816 254274 D identified by similarity to SP:P37568; match to protein family HMM PF05848; CtsR family transcriptional regulator 253816..254274 Listeria monocytogenes serotype 4b str. F2365 2799165 YP_012852.1 CDS LMOf2365_0242 NC_002973.6 254287 254805 D identified by match to protein family HMM PF02151; UVR domain-containing protein 254287..254805 Listeria monocytogenes serotype 4b str. F2365 2798159 YP_012853.1 CDS LMOf2365_0243 NC_002973.6 254802 255824 D identified by similarity to SP:P37570; match to protein family HMM PF00217; ATP:guanido phosphotransferase 254802..255824 Listeria monocytogenes serotype 4b str. F2365 2797607 YP_012854.1 CDS LMOf2365_0244 NC_002973.6 255853 258315 D identified by similarity to GP:1314297; match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; ClpC ATPase 255853..258315 Listeria monocytogenes serotype 4b str. F2365 2799882 YP_012855.1 CDS radA NC_002973.6 258462 259835 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 258462..259835 Listeria monocytogenes serotype 4b str. F2365 2797619 YP_012856.1 CDS LMOf2365_0246 NC_002973.6 259968 261041 D identified by match to protein family HMM PF01850; match to protein family HMM PF01938; PIN/TRAM domain-containing protein 259968..261041 Listeria monocytogenes serotype 4b str. F2365 2798225 YP_012857.1 CDS ispD NC_002973.6 261061 261759 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 261061..261759 Listeria monocytogenes serotype 4b str. F2365 2797930 YP_012858.1 CDS ispF NC_002973.6 261752 262225 D catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 261752..262225 Listeria monocytogenes serotype 4b str. F2365 2799439 YP_012859.1 CDS gltX NC_002973.6 262244 263719 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 262244..263719 Listeria monocytogenes serotype 4b str. F2365 2798244 YP_012860.1 CDS cysE NC_002973.6 264118 264732 D identified by similarity to SP:Q06750; match to protein family HMM PF00132; match to protein family HMM TIGR01172; serine O-acetyltransferase 264118..264732 Listeria monocytogenes serotype 4b str. F2365 2799441 YP_012861.1 CDS cysS NC_002973.6 264739 266154 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 264739..266154 Listeria monocytogenes serotype 4b str. F2365 2799423 YP_012862.1 CDS LMOf2365_0252 NC_002973.6 266158 266583 D identified by similarity to OMNI:NTL01BS00095; match to protein family HMM PF05948; hypothetical protein 266158..266583 Listeria monocytogenes serotype 4b str. F2365 2799011 YP_012863.1 CDS LMOf2365_0253 NC_002973.6 266567 267322 D identified by match to protein family HMM PF00588; match to protein family HMM TIGR00186; RNA methyltransferase 266567..267322 Listeria monocytogenes serotype 4b str. F2365 2798253 YP_012864.1 CDS LMOf2365_0254 NC_002973.6 267325 267837 D identified by match to protein family HMM PF05991; hypothetical protein 267325..267837 Listeria monocytogenes serotype 4b str. F2365 2799894 YP_012865.1 CDS sigH NC_002973.6 267918 268523 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 267918..268523 Listeria monocytogenes serotype 4b str. F2365 2799907 YP_012866.1 CDS rpmG NC_002973.6 268627 268776 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 268627..268776 Listeria monocytogenes serotype 4b str. F2365 2799133 YP_012867.1 CDS secE NC_002973.6 268796 268975 D forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 268796..268975 Listeria monocytogenes serotype 4b str. F2365 2798820 YP_012868.1 CDS nusG NC_002973.6 269105 269638 D Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 269105..269638 Listeria monocytogenes serotype 4b str. F2365 2798947 YP_012869.1 CDS LMOf2365_0259 NC_002973.6 269693 270163 D identified by similarity to OMNI:NTL01LI0277; hypothetical protein 269693..270163 Listeria monocytogenes serotype 4b str. F2365 2799621 YP_012870.1 CDS rplK NC_002973.6 270290 270715 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 270290..270715 Listeria monocytogenes serotype 4b str. F2365 2797383 YP_012871.1 CDS rplA NC_002973.6 270755 271444 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 270755..271444 Listeria monocytogenes serotype 4b str. F2365 2798885 YP_012872.1 CDS rplJ NC_002973.6 271692 272192 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 271692..272192 Listeria monocytogenes serotype 4b str. F2365 2797017 YP_012873.1 CDS rplL NC_002973.6 272271 272633 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 272271..272633 Listeria monocytogenes serotype 4b str. F2365 2797434 YP_012874.1 CDS LMOf2365_0264 NC_002973.6 272767 273381 D identified by similarity to GP:16412713; match to protein family HMM PF05175; hypothetical protein 272767..273381 Listeria monocytogenes serotype 4b str. F2365 2797036 YP_012875.1 CDS LMOf2365_0265 NC_002973.6 273728 274906 D identified by similarity to GP:4678913; match to protein family HMM PF01139; hypothetical protein 273728..274906 Listeria monocytogenes serotype 4b str. F2365 2797203 YP_012876.1 CDS LMOf2365_0266 NC_002973.6 275051 276046 D identified by similarity to SP:P37947; match to protein family HMM PF00532; DegA family transcriptional regulator 275051..276046 Listeria monocytogenes serotype 4b str. F2365 2799754 YP_012877.1 CDS LMOf2365_0267 NC_002973.6 276184 277410 D identified by similarity to SP:P29850; match to protein family HMM PF01547; sugar ABC transporter substrate-binding protein 276184..277410 Listeria monocytogenes serotype 4b str. F2365 2799129 YP_012878.1 CDS LMOf2365_0268 NC_002973.6 277428 278765 D identified by similarity to SP:Q04698; match to protein family HMM PF00528; sugar ABC transporter permease 277428..278765 Listeria monocytogenes serotype 4b str. F2365 2798215 YP_012879.1 CDS LMOf2365_0269 NC_002973.6 278767 279597 D identified by similarity to SP:Q04699; match to protein family HMM PF00528; sugar ABC transporter permease 278767..279597 Listeria monocytogenes serotype 4b str. F2365 2797392 YP_012880.1 CDS malL-2 NC_002973.6 279612 281309 D identified by similarity to SP:P21332; match to protein family HMM PF00128; oligo-1,6-glucosidase 279612..281309 Listeria monocytogenes serotype 4b str. F2365 2798238 YP_012881.1 CDS gtfA NC_002973.6 281310 282752 D identified by similarity to SP:P10249; match to protein family HMM PF00128; sucrose phosphorylase 281310..282752 Listeria monocytogenes serotype 4b str. F2365 2798252 YP_012882.1 CDS LMOf2365_0272 NC_002973.6 282818 283063 D hypothetical protein 282818..283063 Listeria monocytogenes serotype 4b str. F2365 2799565 YP_012883.1 CDS LMOf2365_0273 NC_002973.6 283072 283176 D hypothetical protein 283072..283176 Listeria monocytogenes serotype 4b str. F2365 2798976 YP_012884.1 CDS rpoB NC_002973.6 283309 286863 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 283309..286863 Listeria monocytogenes serotype 4b str. F2365 2797373 YP_012885.1 CDS rpoC NC_002973.6 287034 290639 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 287034..290639 Listeria monocytogenes serotype 4b str. F2365 2799446 YP_012886.1 CDS LMOf2365_0276 NC_002973.6 290739 291260 D hypothetical protein 290739..291260 Listeria monocytogenes serotype 4b str. F2365 2797422 YP_012887.1 CDS LMOf2365_0277 NC_002973.6 291326 292786 D identified by match to protein family HMM PF00232; glycosyl hydrolase 291326..292786 Listeria monocytogenes serotype 4b str. F2365 2799388 YP_012888.1 CDS LMOf2365_0278 NC_002973.6 293001 293444 D hypothetical protein 293001..293444 Listeria monocytogenes serotype 4b str. F2365 2798248 YP_012889.1 CDS LMOf2365_0279 NC_002973.6 293496 295157 D identified by similarity to SP:P15361; match to protein family HMM PF00005; ABC transporter ATP-binding protein 293496..295157 Listeria monocytogenes serotype 4b str. F2365 2799736 YP_012890.1 CDS LMOf2365_0280 NC_002973.6 295154 296929 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein/permease 295154..296929 Listeria monocytogenes serotype 4b str. F2365 2797054 YP_012891.1 CDS inlC2 NC_002973.6 297720 299366 D identified by similarity to GP:2347104; match to protein family HMM PF00560; internalin C2 297720..299366 Listeria monocytogenes serotype 4b str. F2365 2799149 YP_012892.1 CDS inlD NC_002973.6 299575 301281 D identified by similarity to GP:2347105; match to protein family HMM PF00560; internalin D 299575..301281 Listeria monocytogenes serotype 4b str. F2365 2799473 YP_012893.1 CDS inlE NC_002973.6 301493 302992 D identified by similarity to GP:2347106; match to protein family HMM PF00560; match to protein family HMM TIGR01167; internalin E 301493..302992 Listeria monocytogenes serotype 4b str. F2365 2799899 YP_012894.2 CDS LMOf2365_0284 NC_002973.6 303126 304265 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 303126..304265 Listeria monocytogenes serotype 4b str. F2365 2799468 YP_012895.1 CDS LMOf2365_0285 NC_002973.6 304412 304828 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 304412..304828 Listeria monocytogenes serotype 4b str. F2365 2799431 YP_012896.1 CDS LMOf2365_0286 NC_002973.6 304835 305794 D identified by match to protein family HMM PF00903; glyoxalase 304835..305794 Listeria monocytogenes serotype 4b str. F2365 2798056 YP_012897.1 CDS LMOf2365_0287 NC_002973.6 305866 306501 D identified by match to protein family HMM PF00300; phosphoglycerate mutase 305866..306501 Listeria monocytogenes serotype 4b str. F2365 2796991 YP_012898.1 CDS LMOf2365_0288 NC_002973.6 306585 308471 D identified by similarity to SP:P37315; match to protein family HMM PF00528; transporter 306585..308471 Listeria monocytogenes serotype 4b str. F2365 2797381 YP_012899.1 CDS LMOf2365_0289 NC_002973.6 308500 309585 R identified by match to protein family HMM PF00560; hypothetical protein complement(308500..309585) Listeria monocytogenes serotype 4b str. F2365 2798892 YP_012900.1 CDS LMOf2365_0290 NC_002973.6 309719 310345 R identified by similarity to OMNI:NTL01LI0294; hypothetical protein complement(309719..310345) Listeria monocytogenes serotype 4b str. F2365 2799407 YP_012901.1 CDS LMOf2365_0291 NC_002973.6 310346 311782 R identified by match to protein family HMM PF00232; glycosyl hydrolase complement(310346..311782) Listeria monocytogenes serotype 4b str. F2365 2797368 YP_012902.1 CDS LMOf2365_0292 NC_002973.6 311902 312714 R identified by similarity to OMNI:NTL01LI0194; match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD superfamily hydrolase complement(311902..312714) Listeria monocytogenes serotype 4b str. F2365 2797777 YP_012903.1 CDS LMOf2365_0293 NC_002973.6 312850 313353 D identified by match to protein family HMM PF00583; acetyltransferase 312850..313353 Listeria monocytogenes serotype 4b str. F2365 2797702 YP_012904.1 CDS LMOf2365_0294 NC_002973.6 313390 314052 R identified by similarity to OMNI:NTL01LI0298; hypothetical protein complement(313390..314052) Listeria monocytogenes serotype 4b str. F2365 2797672 YP_012905.1 CDS LMOf2365_0295 NC_002973.6 314310 315152 R identified by similarity to SP:P39695; match to protein family HMM PF00753; competence protein ComEC/Rec2-like protein complement(314310..315152) Listeria monocytogenes serotype 4b str. F2365 2797885 YP_012906.1 CDS LMOf2365_0296 NC_002973.6 315169 315990 R identified by similarity to GP:16412731; match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD superfamily hydrolase complement(315169..315990) Listeria monocytogenes serotype 4b str. F2365 2797904 YP_012907.1 CDS LMOf2365_0297 NC_002973.6 316106 317077 D identified by match to protein family HMM PF01408; match to protein family HMM PF02894; Gfo/Idh/MocA family oxidoreductase 316106..317077 Listeria monocytogenes serotype 4b str. F2365 2797006 YP_012908.1 CDS LMOf2365_0298 NC_002973.6 317115 318215 R identified by similarity to SP:Q00752; match to protein family HMM PF00005; match to protein family HMM PF03459; sugar ABC transporter ATP-binding protein complement(317115..318215) Listeria monocytogenes serotype 4b str. F2365 2797677 YP_012909.1 CDS nrdD NC_002973.6 318506 320656 D Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 318506..320656 Listeria monocytogenes serotype 4b str. F2365 2797895 YP_012910.1 CDS nrdG NC_002973.6 320649 321200 D identified by similarity to GP:4098082; anaerobic ribonucleoside-triphosphate reductase activating protein 320649..321200 Listeria monocytogenes serotype 4b str. F2365 2797869 YP_012911.1 CDS LMOf2365_0301 NC_002973.6 321344 322015 R identified by similarity to OMNI:NTL01LI0307; hypothetical protein complement(321344..322015) Listeria monocytogenes serotype 4b str. F2365 2797691 YP_012912.1 CDS LMOf2365_0302 NC_002973.6 322180 322959 R identified by match to protein family HMM PF00795; carbon-nitrogen family hydrolase complement(322180..322959) Listeria monocytogenes serotype 4b str. F2365 2799440 YP_012913.1 CDS LMOf2365_0303 NC_002973.6 323049 323711 R identified by match to protein family HMM PF00528; ABC transporter permease complement(323049..323711) Listeria monocytogenes serotype 4b str. F2365 2798143 YP_012914.1 CDS LMOf2365_0304 NC_002973.6 323708 324724 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(323708..324724) Listeria monocytogenes serotype 4b str. F2365 2797044 YP_012915.1 CDS LMOf2365_0305 NC_002973.6 324739 325560 R identified by match to protein family HMM PF03180; match to protein family HMM TIGR00363; ABC transporter substrate-binding protein complement(324739..325560) Listeria monocytogenes serotype 4b str. F2365 2798921 YP_012916.1 CDS LMOf2365_0306 NC_002973.6 325941 327122 D produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; transaminase 325941..327122 Listeria monocytogenes serotype 4b str. F2365 2799012 YP_012917.1 CDS LMOf2365_0307 NC_002973.6 327335 328048 D identified by similarity to SP:P13792; match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 327335..328048 Listeria monocytogenes serotype 4b str. F2365 2799426 YP_012918.1 CDS LMOf2365_0308 NC_002973.6 328233 330065 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box histidine kinase 328233..330065 Listeria monocytogenes serotype 4b str. F2365 2797578 YP_012919.1 CDS LMOf2365_0309 NC_002973.6 330062 331384 D identified by similarity to OMNI:NTL01SA0021; hypothetical protein 330062..331384 Listeria monocytogenes serotype 4b str. F2365 2799231 YP_012920.1 CDS LMOf2365_0310 NC_002973.6 331387 332226 D identified by similarity to OMNI:NTL01BH4030; hypothetical protein 331387..332226 Listeria monocytogenes serotype 4b str. F2365 2798285 YP_012921.1 CDS LMOf2365_0311 NC_002973.6 332347 333177 D identified by match to protein family HMM PF00753; metallo-beta-lactamase 332347..333177 Listeria monocytogenes serotype 4b str. F2365 2799330 YP_012922.1 CDS LMOf2365_0312 NC_002973.6 333275 334777 D identified by similarity to SP:Q9LA06; match to protein family HMM PF00089; match to protein family HMM PF00595; serine protease 333275..334777 Listeria monocytogenes serotype 4b str. F2365 2799089 YP_012923.1 CDS LMOf2365_0313 NC_002973.6 335107 335202 D hypothetical protein 335107..335202 Listeria monocytogenes serotype 4b str. F2365 2799171 YP_012924.1 CDS LMOf2365_0314 NC_002973.6 335465 335944 D SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 335465..335944 Listeria monocytogenes serotype 4b str. F2365 2799711 YP_012925.1 CDS LMOf2365_0315 NC_002973.6 335976 336839 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(335976..336839) Listeria monocytogenes serotype 4b str. F2365 2799295 YP_012926.1 CDS LMOf2365_0316 NC_002973.6 336958 337695 D identified by match to protein family HMM PF00881; nitroreductase 336958..337695 Listeria monocytogenes serotype 4b str. F2365 2799039 YP_012927.1 CDS LMOf2365_0317 NC_002973.6 337906 338544 D identified by similarity to OMNI:NTL01LI0322; hypothetical protein 337906..338544 Listeria monocytogenes serotype 4b str. F2365 2799248 YP_012928.1 CDS LMOf2365_0318 NC_002973.6 338549 340420 R identified by match to protein family HMM PF00359; match to protein family HMM PF00874; PRD/PTS system IIA 2 domain-containing protein complement(338549..340420) Listeria monocytogenes serotype 4b str. F2365 2799026 YP_012929.1 CDS LMOf2365_0319 NC_002973.6 340519 341832 R identified by match to protein family HMM PF02378; match to protein family HMM TIGR00410; PTS system transporter subunit IIC complement(340519..341832) Listeria monocytogenes serotype 4b str. F2365 2799034 YP_012930.1 CDS LMOf2365_0320 NC_002973.6 341837 342127 R identified by match to protein family HMM PF02302; PTS system cellobiose-specific transporter subunit IIB complement(341837..342127) Listeria monocytogenes serotype 4b str. F2365 2799292 YP_012931.1 CDS LMOf2365_0321 NC_002973.6 342144 343535 R identified by match to protein family HMM PF00232; glycosyl hydrolase complement(342144..343535) Listeria monocytogenes serotype 4b str. F2365 2799051 YP_012932.1 CDS LMOf2365_0322 NC_002973.6 343528 343869 R identified by similarity to SP:P17335; match to protein family HMM PF02255; PTS system beta-glucoside-specific transporter subunit IIA complement(343528..343869) Listeria monocytogenes serotype 4b str. F2365 2799055 YP_012933.1 CDS LMOf2365_0323 NC_002973.6 343921 344007 D hypothetical protein 343921..344007 Listeria monocytogenes serotype 4b str. F2365 2799045 YP_012934.1 CDS LMOf2365_0325 NC_002973.6 344509 346176 R identified by similarity to SP:P16667; match to protein family HMM PF02976; type II restriction enzyme Sau3AI complement(344509..346176) Listeria monocytogenes serotype 4b str. F2365 2799078 YP_012935.1 CDS LMOf2365_0326 NC_002973.6 346304 346510 D identified by match to protein family HMM PF01381; DNA-binding protein 346304..346510 Listeria monocytogenes serotype 4b str. F2365 2799691 YP_012936.1 CDS LMOf2365_0327 NC_002973.6 346513 347922 D identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; C-5 cytosine-specific DNA methylase 346513..347922 Listeria monocytogenes serotype 4b str. F2365 2799234 YP_012937.1 CDS LMOf2365_0328 NC_002973.6 348172 349026 D hypothetical protein 348172..349026 Listeria monocytogenes serotype 4b str. F2365 2799213 YP_012938.1 CDS LMOf2365_0329 NC_002973.6 349247 349801 D lipoprotein 349247..349801 Listeria monocytogenes serotype 4b str. F2365 2799181 YP_012939.1 CDS LMOf2365_0330 NC_002973.6 349992 351071 D identified by similarity to SP:P75823; threonine aldolase 349992..351071 Listeria monocytogenes serotype 4b str. F2365 2797925 YP_012940.1 CDS LMOf2365_0331 NC_002973.6 351321 352241 D identified by match to protein family HMM PF01435; M48 family peptidase 351321..352241 Listeria monocytogenes serotype 4b str. F2365 2799253 YP_012941.1 CDS LMOf2365_0332 NC_002973.6 352266 353051 D identified by similarity to OMNI:NTL01LI0337; match to protein family HMM PF04794; hypothetical protein 352266..353051 Listeria monocytogenes serotype 4b str. F2365 2799161 YP_012942.1 CDS LMOf2365_0333 NC_002973.6 353274 353948 D identified by match to protein family HMM PF03070; TENA/THI-4 family protein 353274..353948 Listeria monocytogenes serotype 4b str. F2365 2797936 YP_012943.1 CDS thiM NC_002973.6 353953 354750 D catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 353953..354750 Listeria monocytogenes serotype 4b str. F2365 2799240 YP_012944.1 CDS thiD-1 NC_002973.6 354747 355550 D identified by match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 354747..355550 Listeria monocytogenes serotype 4b str. F2365 2799210 YP_012945.1 CDS thiE NC_002973.6 355547 356191 D Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase 355547..356191 Listeria monocytogenes serotype 4b str. F2365 2799134 YP_012946.1 CDS bglH-1 NC_002973.6 356218 357633 R identified by similarity to SP:P40740; match to protein family HMM PF00232; beta-glucosidase complement(356218..357633) Listeria monocytogenes serotype 4b str. F2365 2799158 YP_012947.1 CDS LMOf2365_0338 NC_002973.6 357848 359116 R identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein complement(357848..359116) Listeria monocytogenes serotype 4b str. F2365 2799192 YP_012948.1 CDS LMOf2365_0339 NC_002973.6 359444 360103 D identified by similarity to GP:16412775; hypothetical protein 359444..360103 Listeria monocytogenes serotype 4b str. F2365 2799593 YP_012949.1 CDS LMOf2365_0340 NC_002973.6 360401 360793 D identified by similarity to OMNI:NTL01LI0345; hypothetical protein 360401..360793 Listeria monocytogenes serotype 4b str. F2365 2799126 YP_012950.1 CDS LMOf2365_0341 NC_002973.6 360828 361601 R identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase complement(360828..361601) Listeria monocytogenes serotype 4b str. F2365 2799170 YP_012951.1 CDS LMOf2365_0342 NC_002973.6 361756 362223 D lipoprotein 361756..362223 Listeria monocytogenes serotype 4b str. F2365 2799084 YP_012952.1 CDS LMOf2365_0343 NC_002973.6 362491 363393 D identified by match to protein family HMM PF01381; match to protein family HMM TIGR01716; transcriptional activator 362491..363393 Listeria monocytogenes serotype 4b str. F2365 2799612 YP_012953.1 CDS LMOf2365_0344 NC_002973.6 363557 364429 D identified by match to protein family HMM PF01381; match to protein family HMM TIGR01716; transcriptional activator 363557..364429 Listeria monocytogenes serotype 4b str. F2365 2799321 YP_012954.1 CDS LMOf2365_0345 NC_002973.6 364736 368677 D identified by similarity to OMNI:NTL01LM2386; hypothetical protein 364736..368677 Listeria monocytogenes serotype 4b str. F2365 2799060 YP_012955.1 CDS LMOf2365_0346 NC_002973.6 368767 369495 D identified by similarity to GP:16412782; hypothetical protein 368767..369495 Listeria monocytogenes serotype 4b str. F2365 2799308 YP_012956.1 CDS LMOf2365_0347 NC_002973.6 369650 371506 R identified by match to protein family HMM PF00560; match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein complement(369650..371506) Listeria monocytogenes serotype 4b str. F2365 2799218 YP_012957.1 CDS LMOf2365_0348 NC_002973.6 372017 372169 D hypothetical protein 372017..372169 Listeria monocytogenes serotype 4b str. F2365 2797569 YP_012958.1 CDS LMOf2365_0349 NC_002973.6 372153 375296 D identified by match to protein family HMM PF00560; match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein 372153..375296 Listeria monocytogenes serotype 4b str. F2365 2799311 YP_012959.1 CDS LMOf2365_0350 NC_002973.6 375686 381013 D identified by match to protein family HMM PF00560; match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein 375686..381013 Listeria monocytogenes serotype 4b str. F2365 2797565 YP_012960.1 CDS LMOf2365_0351 NC_002973.6 381237 381761 D hypothetical protein 381237..381761 Listeria monocytogenes serotype 4b str. F2365 2799028 YP_012961.1 CDS LMOf2365_0352 NC_002973.6 381974 382258 D identified by similarity to OMNI:NTL01LI0353; hypothetical protein 381974..382258 Listeria monocytogenes serotype 4b str. F2365 2799676 YP_012962.1 CDS LMOf2365_0353 NC_002973.6 382259 382627 D identified by similarity to OMNI:NTL01LI0354; hypothetical protein 382259..382627 Listeria monocytogenes serotype 4b str. F2365 2799081 YP_012963.1 CDS LMOf2365_0354 NC_002973.6 382624 384060 D hypothetical protein 382624..384060 Listeria monocytogenes serotype 4b str. F2365 2799325 YP_012964.1 CDS LMOf2365_0355 NC_002973.6 384072 384467 D identified by similarity to OMNI:NTL01PM0501; hypothetical protein 384072..384467 Listeria monocytogenes serotype 4b str. F2365 2799018 YP_012965.1 CDS LMOf2365_0356 NC_002973.6 384604 384723 D hypothetical protein 384604..384723 Listeria monocytogenes serotype 4b str. F2365 2799094 YP_012966.1 CDS LMOf2365_0357 NC_002973.6 384828 385058 D identified by similarity to OMNI:NTL01NM00296; hypothetical protein 384828..385058 Listeria monocytogenes serotype 4b str. F2365 2799097 YP_012967.1 CDS LMOf2365_0358 NC_002973.6 385137 385364 D hypothetical protein 385137..385364 Listeria monocytogenes serotype 4b str. F2365 2799257 YP_012968.1 CDS LMOf2365_0359 NC_002973.6 385524 385793 D hypothetical protein 385524..385793 Listeria monocytogenes serotype 4b str. F2365 2799059 YP_012969.1 CDS LMOf2365_0360 NC_002973.6 385787 385909 D hypothetical protein 385787..385909 Listeria monocytogenes serotype 4b str. F2365 2799086 YP_012970.1 CDS LMOf2365_0361 NC_002973.6 386169 386357 D identified by similarity to OMNI:EFA0076; hypothetical protein 386169..386357 Listeria monocytogenes serotype 4b str. F2365 2799260 YP_012971.1 CDS tkt-1 NC_002973.6 386477 388474 R identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; transketolase complement(386477..388474) Listeria monocytogenes serotype 4b str. F2365 2799267 YP_012972.1 CDS LMOf2365_0363 NC_002973.6 388476 389132 R similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase complement(388476..389132) Listeria monocytogenes serotype 4b str. F2365 2799270 YP_012973.1 CDS LMOf2365_0364 NC_002973.6 389179 389943 R identified by match to protein family HMM PF00106; short chain dehydrogenase complement(389179..389943) Listeria monocytogenes serotype 4b str. F2365 2799102 YP_012974.1 CDS rpiB-1 NC_002973.6 389968 390414 R identified by similarity to SP:P37351; match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120; ribose 5-phosphate isomerase B complement(389968..390414) Listeria monocytogenes serotype 4b str. F2365 2799299 YP_012975.1 CDS tpiA-1 NC_002973.6 390421 391185 R identified by match to protein family HMM PF00121; triosephosphate isomerase complement(390421..391185) Listeria monocytogenes serotype 4b str. F2365 2799316 YP_012976.1 CDS LMOf2365_0367 NC_002973.6 391189 391839 R identified by similarity to GP:15082276; match to protein family HMM PF02734; dihydroxyacetone kinase complement(391189..391839) Listeria monocytogenes serotype 4b str. F2365 2799305 YP_012977.1 CDS LMOf2365_0368 NC_002973.6 391861 392856 R identified by similarity to GP:15082277; match to protein family HMM PF02733; dihydroxyacetone kinase complement(391861..392856) Listeria monocytogenes serotype 4b str. F2365 2799284 YP_012978.1 CDS LMOf2365_0369 NC_002973.6 392878 393219 R identified by similarity to OMNI:NTL01LI0365; hypothetical protein complement(392878..393219) Listeria monocytogenes serotype 4b str. F2365 2799017 YP_012979.1 CDS LMOf2365_0370 NC_002973.6 393235 393666 R identified by similarity to OMNI:NTL01LI0366; hypothetical protein complement(393235..393666) Listeria monocytogenes serotype 4b str. F2365 2799280 YP_012980.1 CDS LMOf2365_0371 NC_002973.6 393751 394128 R identified by match to protein family HMM PF03610; PTS system mannnose-specific transporter subunit IIA complement(393751..394128) Listeria monocytogenes serotype 4b str. F2365 2799602 YP_012981.1 CDS LMOf2365_0372 NC_002973.6 394311 395075 D identified by match to protein family HMM PF00455; DeoR family transcriptional regulator 394311..395075 Listeria monocytogenes serotype 4b str. F2365 2798192 YP_012982.1 CDS LMOf2365_0373 NC_002973.6 395141 395551 D identified by match to protein family HMM PF00583; acetyltransferase 395141..395551 Listeria monocytogenes serotype 4b str. F2365 2799143 YP_012983.1 CDS LMOf2365_0374 NC_002973.6 395649 397418 D identified by similarity to GP:2347104; match to protein family HMM PF00560; internalin 395649..397418 Listeria monocytogenes serotype 4b str. F2365 2797573 YP_012984.1 CDS LMOf2365_0375 NC_002973.6 397459 398985 R identified by similarity to GP:12723568; match to protein family HMM PF00501; long-chain acyl-CoA synthetase complement(397459..398985) Listeria monocytogenes serotype 4b str. F2365 2797649 YP_012985.1 CDS LMOf2365_0376 NC_002973.6 399222 400742 D Reduces fumarate to succinate in anaerobic bacterial respiration; fumarate reductase flavoprotein subunit 399222..400742 Listeria monocytogenes serotype 4b str. F2365 2799235 YP_012986.1 CDS LMOf2365_0377 NC_002973.6 400946 401962 D identified by match to protein family HMM PF01408; match to protein family HMM PF02894; YhhX family oxidoreductase 400946..401962 Listeria monocytogenes serotype 4b str. F2365 2799183 YP_012987.1 CDS LMOf2365_0379 NC_002973.6 404018 404878 D identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; hypothetical protein 404018..404878 Listeria monocytogenes serotype 4b str. F2365 2797198 YP_012988.1 CDS LMOf2365_0380 NC_002973.6 404935 405705 D identified by match to protein family HMM PF00455; DeoR family transcriptional regulator 404935..405705 Listeria monocytogenes serotype 4b str. F2365 2799132 YP_012989.1 CDS LMOf2365_0381 NC_002973.6 405689 405916 R hypothetical protein complement(405689..405916) Listeria monocytogenes serotype 4b str. F2365 2797945 YP_012990.1 CDS LMOf2365_0382 NC_002973.6 406017 406634 R identified by match to protein family HMM PF03575; S51 family peptidase complement(406017..406634) Listeria monocytogenes serotype 4b str. F2365 2799274 YP_012991.1 CDS LMOf2365_0383 NC_002973.6 406729 407676 D identified by similarity to OMNI:NTL01LI0381; hypothetical protein 406729..407676 Listeria monocytogenes serotype 4b str. F2365 2799110 YP_012992.1 CDS LMOf2365_0384 NC_002973.6 407726 408235 D identified by match to protein family HMM PF00293; MutT/nudix family protein 407726..408235 Listeria monocytogenes serotype 4b str. F2365 2799071 YP_012993.1 CDS LMOf2365_0385 NC_002973.6 408331 409050 D identified by similarity to OMNI:NTL01LI0386; match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein 408331..409050 Listeria monocytogenes serotype 4b str. F2365 2797949 YP_012994.1 CDS phnA NC_002973.6 409087 409422 D identified by match to protein family HMM PF03831; match to protein family HMM TIGR00686; alkylphosphonate utilization operon protein PhnA 409087..409422 Listeria monocytogenes serotype 4b str. F2365 2798985 YP_012995.1 CDS LMOf2365_0387 NC_002973.6 409462 410175 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(409462..410175) Listeria monocytogenes serotype 4b str. F2365 2798922 YP_012996.1 CDS LMOf2365_0388 NC_002973.6 410332 411774 D identified by match to protein family HMM PF00232; glycosyl hydrolase 410332..411774 Listeria monocytogenes serotype 4b str. F2365 2798298 YP_012997.1 CDS LMOf2365_0389 NC_002973.6 411767 413101 D identified by match to protein family HMM PF02378; match to protein family HMM TIGR00410; PTS system beta-glucoside-specific transporter subunit IIC 411767..413101 Listeria monocytogenes serotype 4b str. F2365 2799389 YP_012998.1 CDS LMOf2365_0390 NC_002973.6 413119 413421 D identified by similarity to SP:P46318; match to protein family HMM PF02302; PTS system beta-glucoside-specific transporter subunit IIB 413119..413421 Listeria monocytogenes serotype 4b str. F2365 2797622 YP_012999.1 CDS LMOf2365_0391 NC_002973.6 413508 413702 D identified by similarity to OMNI:NTL01LI0392; hypothetical protein 413508..413702 Listeria monocytogenes serotype 4b str. F2365 2797008 YP_013000.1 CDS LMOf2365_0392 NC_002973.6 413741 414661 R identified by similarity to OMNI:NTL01LI0393; hypothetical protein complement(413741..414661) Listeria monocytogenes serotype 4b str. F2365 2797024 YP_013001.1 CDS LMOf2365_0393 NC_002973.6 414764 415183 D identified by similarity to OMNI:NTL01LI0394; hypothetical protein 414764..415183 Listeria monocytogenes serotype 4b str. F2365 2797397 YP_013002.1 CDS LMOf2365_0394 NC_002973.6 415232 415993 R identified by match to protein family HMM PF00455; DeoR family transcriptional regulator complement(415232..415993) Listeria monocytogenes serotype 4b str. F2365 2799452 YP_013003.1 CDS mmsA NC_002973.6 416188 417654 D identified by similarity to SP:P42412; match to protein family HMM PF00171; match to protein family HMM TIGR01722; methylmalonate-semialdehyde dehydrogenase 416188..417654 Listeria monocytogenes serotype 4b str. F2365 2798068 YP_013004.1 CDS LMOf2365_0396 NC_002973.6 417667 418488 D identified by similarity to SP:P42413; IolB protein 417667..418488 Listeria monocytogenes serotype 4b str. F2365 2797043 YP_013005.1 CDS LMOf2365_0397 NC_002973.6 418505 419482 D identified by similarity to SP:P42414; match to protein family HMM PF00294; IolC protein 418505..419482 Listeria monocytogenes serotype 4b str. F2365 2799403 YP_013006.1 CDS LMOf2365_0398 NC_002973.6 419492 421411 D identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; thiamine-pyrophosphate-requiring enzyme 419492..421411 Listeria monocytogenes serotype 4b str. F2365 2798148 YP_013007.1 CDS LMOf2365_0399 NC_002973.6 421544 421915 D identified by similarity to OMNI:NTL01LI0403; hypothetical protein 421544..421915 Listeria monocytogenes serotype 4b str. F2365 2798914 YP_013008.1 CDS LMOf2365_0400 NC_002973.6 422009 422377 D identified by similarity to OMNI:NTL01LI0404; hypothetical protein 422009..422377 Listeria monocytogenes serotype 4b str. F2365 2797026 YP_013009.1 CDS LMOf2365_0401 NC_002973.6 422401 423516 R hypothetical protein complement(422401..423516) Listeria monocytogenes serotype 4b str. F2365 2798497 YP_013010.1 CDS ung-1 NC_002973.6 423647 424312 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 423647..424312 Listeria monocytogenes serotype 4b str. F2365 2798412 YP_013011.1 CDS LMOf2365_0403 NC_002973.6 424480 424779 D identified by similarity to OMNI:NTL01LI0407; hypothetical protein 424480..424779 Listeria monocytogenes serotype 4b str. F2365 2798329 YP_013012.1 CDS LMOf2365_0404 NC_002973.6 424776 425720 D identified by similarity to OMNI:NTL01SA1454; hypothetical protein 424776..425720 Listeria monocytogenes serotype 4b str. F2365 2798763 YP_013013.1 CDS LMOf2365_0405 NC_002973.6 425755 426204 D identified by similarity to GP:16412840; hypothetical protein 425755..426204 Listeria monocytogenes serotype 4b str. F2365 2798726 YP_013014.1 CDS LMOf2365_0406 NC_002973.6 426315 427031 D identified by match to protein family HMM PF00877; NLP/P60 family protein 426315..427031 Listeria monocytogenes serotype 4b str. F2365 2799116 YP_013015.1 CDS LMOf2365_0407 NC_002973.6 427087 427512 D identified by match to protein family HMM PF00583; acetyltransferase 427087..427512 Listeria monocytogenes serotype 4b str. F2365 2797050 YP_013016.1 CDS proC NC_002973.6 427515 428315 R catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase complement(427515..428315) Listeria monocytogenes serotype 4b str. F2365 2797090 YP_013017.1 CDS LMOf2365_0409 NC_002973.6 428664 428876 D hypothetical protein 428664..428876 Listeria monocytogenes serotype 4b str. F2365 2797086 YP_013018.1 CDS LMOf2365_0410 NC_002973.6 428922 429023 D hypothetical protein 428922..429023 Listeria monocytogenes serotype 4b str. F2365 2797129 YP_013019.1 CDS LMOf2365_0411 NC_002973.6 429060 429161 D hypothetical protein 429060..429161 Listeria monocytogenes serotype 4b str. F2365 2797162 YP_013020.1 CDS LMOf2365_0412 NC_002973.6 429199 429300 D hypothetical protein 429199..429300 Listeria monocytogenes serotype 4b str. F2365 2797221 YP_013021.1 CDS LMOf2365_0413 NC_002973.6 429391 430614 D identified by match to protein family HMM TIGR01167; cell wall surface anchor family protein 429391..430614 Listeria monocytogenes serotype 4b str. F2365 2797258 YP_013022.1 CDS LMOf2365_0414 NC_002973.6 430731 431381 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 430731..431381 Listeria monocytogenes serotype 4b str. F2365 2797435 YP_013023.1 CDS LMOf2365_0415 NC_002973.6 431426 432025 D hypothetical protein 431426..432025 Listeria monocytogenes serotype 4b str. F2365 2798791 YP_013024.1 CDS LMOf2365_0416 NC_002973.6 432043 432717 D ABC transporter ATP-binding protein 432043..432717 Listeria monocytogenes serotype 4b str. F2365 2799730 YP_013025.1 CDS LMOf2365_0417 NC_002973.6 432702 433880 D identified by match to protein family HMM PF02687; ABC transporter permease 432702..433880 Listeria monocytogenes serotype 4b str. F2365 2797543 YP_013026.1 CDS LMOf2365_0418 NC_002973.6 433899 434042 D hypothetical protein 433899..434042 Listeria monocytogenes serotype 4b str. F2365 2797497 YP_013027.1 CDS LMOf2365_0419 NC_002973.6 434113 434595 D identified by match to protein family HMM PF05146; hypothetical protein 434113..434595 Listeria monocytogenes serotype 4b str. F2365 2797522 YP_013028.1 CDS LMOf2365_0421 NC_002973.6 436683 439316 D identified by match to protein family HMM PF01074; alpha-mannosidase 436683..439316 Listeria monocytogenes serotype 4b str. F2365 2797527 YP_013029.1 CDS LMOf2365_0422 NC_002973.6 439349 441283 D identified by match to protein family HMM PF00359; match to protein family HMM PF00874; match to protein family HMM PF02302; PRD/PTS system IIA 2 domain-containing protein 439349..441283 Listeria monocytogenes serotype 4b str. F2365 2797250 YP_013030.1 CDS LMOf2365_0423 NC_002973.6 441410 441826 D identified by similarity to OMNI:NTL01LI0424; hypothetical protein 441410..441826 Listeria monocytogenes serotype 4b str. F2365 2797242 YP_013031.1 CDS LMOf2365_0424 NC_002973.6 441823 442215 D hypothetical protein 441823..442215 Listeria monocytogenes serotype 4b str. F2365 2797454 YP_013032.1 CDS LMOf2365_0425 NC_002973.6 442324 443331 D identified by match to protein family HMM PF01384; phosphate transporter family protein 442324..443331 Listeria monocytogenes serotype 4b str. F2365 2797229 YP_013033.1 CDS LMOf2365_0426 NC_002973.6 443347 443727 D identified by match to protein family HMM PF00903; glyoxalase 443347..443727 Listeria monocytogenes serotype 4b str. F2365 2797215 YP_013034.1 CDS LMOf2365_0427 NC_002973.6 443796 444188 D identified by similarity to OMNI:NTL01LI0428; hypothetical protein 443796..444188 Listeria monocytogenes serotype 4b str. F2365 2797141 YP_013035.1 CDS LMOf2365_0428 NC_002973.6 444201 444623 D identified by similarity to OMNI:NTL01LI0429; hypothetical protein 444201..444623 Listeria monocytogenes serotype 4b str. F2365 2797175 YP_013036.1 CDS inlF NC_002973.6 444851 447322 D identified by similarity to GP:2347102; match to protein family HMM PF00560; match to protein family HMM TIGR01167; internalin 444851..447322 Listeria monocytogenes serotype 4b str. F2365 2797185 YP_013037.1 CDS LMOf2365_0430 NC_002973.6 447370 449973 R catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase complement(447370..449973) Listeria monocytogenes serotype 4b str. F2365 2797195 YP_013038.1 CDS LMOf2365_0431 NC_002973.6 450173 451051 R identified by similarity to OMNI:NTL01LI0431; hypothetical protein complement(450173..451051) Listeria monocytogenes serotype 4b str. F2365 2797136 YP_013039.1 CDS LMOf2365_0432 NC_002973.6 451388 451579 D identified by similarity to OMNI:NTL01LI0432; hypothetical protein 451388..451579 Listeria monocytogenes serotype 4b str. F2365 2797095 YP_013040.1 CDS LMOf2365_0433 NC_002973.6 451606 452415 D identified by match to protein family HMM PF02535; ZIP zinc transporter family protein 451606..452415 Listeria monocytogenes serotype 4b str. F2365 2797099 YP_013041.1 CDS LMOf2365_0434 NC_002973.6 452708 454108 D identified by similarity to OMNI:NTL02SP1332; match to protein family HMM PF01522; polysaccharide deacetylase 452708..454108 Listeria monocytogenes serotype 4b str. F2365 2797104 YP_013042.1 CDS LMOf2365_0435 NC_002973.6 454235 454438 D identified by match to protein family HMM PF01381; DNA-binding protein 454235..454438 Listeria monocytogenes serotype 4b str. F2365 2797079 YP_013043.1 CDS LMOf2365_0436 NC_002973.6 454440 454850 D identified by similarity to OMNI:NTL01LI0436; hypothetical protein 454440..454850 Listeria monocytogenes serotype 4b str. F2365 2797094 YP_013044.1 CDS LMOf2365_0437 NC_002973.6 454903 455202 R identified by similarity to OMNI:NTL01LI0437; hypothetical protein complement(454903..455202) Listeria monocytogenes serotype 4b str. F2365 2797089 YP_013045.1 CDS LMOf2365_0438 NC_002973.6 455283 455837 R identified by similarity to OMNI:NTL01LL0877; hypothetical protein complement(455283..455837) Listeria monocytogenes serotype 4b str. F2365 2797072 YP_013046.1 CDS LMOf2365_0439 NC_002973.6 455984 456796 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; cof family hydrolase 455984..456796 Listeria monocytogenes serotype 4b str. F2365 2797074 YP_013047.1 CDS LMOf2365_0440 NC_002973.6 456815 457672 R identified by similarity to GP:2226001; sugar transporter complement(456815..457672) Listeria monocytogenes serotype 4b str. F2365 2797038 YP_013048.1 CDS LMOf2365_0441 NC_002973.6 457835 459796 D identified by match to protein family HMM PF00359; match to protein family HMM PF00874; match to protein family HMM PF02302; PRD/PTS system IIA 2 domain-containing protein 457835..459796 Listeria monocytogenes serotype 4b str. F2365 2797069 YP_013049.1 CDS LMOf2365_0442 NC_002973.6 459796 460260 D identified by match to protein family HMM PF00359; match to protein family HMM TIGR00848; PTS system fructose-specific transporter subunit IIA 459796..460260 Listeria monocytogenes serotype 4b str. F2365 2797612 YP_013050.1 CDS LMOf2365_0443 NC_002973.6 460257 460577 D identified by match to protein family HMM PF02379; match to protein family HMM TIGR00829; PTS system fructose-specific transporter subunit IIB 460257..460577 Listeria monocytogenes serotype 4b str. F2365 2798715 YP_013051.1 CDS LMOf2365_0444 NC_002973.6 460590 461696 D identified by match to protein family HMM PF02378; match to protein family HMM TIGR01427; PTS system fructose-specific transporter subunit IIC 460590..461696 Listeria monocytogenes serotype 4b str. F2365 2797037 YP_013052.1 CDS LMOf2365_0445 NC_002973.6 461712 464294 D identified by match to protein family HMM PF01074; glycosyl hydrolase 461712..464294 Listeria monocytogenes serotype 4b str. F2365 2798804 YP_013053.1 CDS LMOf2365_0446 NC_002973.6 464317 465192 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(464317..465192) Listeria monocytogenes serotype 4b str. F2365 2798819 YP_013054.1 CDS LMOf2365_0447 NC_002973.6 465310 465879 D identified by similarity to SP:Q09707; match to protein family HMM PF00132; acetyltransferase 465310..465879 Listeria monocytogenes serotype 4b str. F2365 2798691 YP_013055.1 CDS LMOf2365_0448 NC_002973.6 465893 466639 D identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase oxidoreductase 465893..466639 Listeria monocytogenes serotype 4b str. F2365 2798751 YP_013056.1 CDS LMOf2365_0449 NC_002973.6 466835 467260 D identified by similarity to OMNI:NTL01LI0450; hypothetical protein 466835..467260 Listeria monocytogenes serotype 4b str. F2365 2798739 YP_013057.1 CDS LMOf2365_0450 NC_002973.6 467516 474103 D identified by similarity to SP:Q07833; match to protein family HMM PF05593; match to protein family HMM TIGR01612; match to protein family HMM TIGR01643; wall-associated protein 467516..474103 Listeria monocytogenes serotype 4b str. F2365 2798821 YP_013058.1 CDS LMOf2365_0451 NC_002973.6 474103 474585 D hypothetical protein 474103..474585 Listeria monocytogenes serotype 4b str. F2365 2798595 YP_013059.1 CDS LMOf2365_0452 NC_002973.6 474856 474969 D hypothetical protein 474856..474969 Listeria monocytogenes serotype 4b str. F2365 2798630 YP_013060.1 CDS LMOf2365_0453 NC_002973.6 475465 475815 D hypothetical protein 475465..475815 Listeria monocytogenes serotype 4b str. F2365 2797827 YP_013061.1 CDS LMOf2365_0454 NC_002973.6 475978 476568 D identified by similarity to GP:19915967; hypothetical protein 475978..476568 Listeria monocytogenes serotype 4b str. F2365 2798818 YP_013062.1 CDS LMOf2365_0455 NC_002973.6 476595 477041 D hypothetical protein 476595..477041 Listeria monocytogenes serotype 4b str. F2365 2797567 YP_013063.1 CDS LMOf2365_0456 NC_002973.6 477058 477666 D hypothetical protein 477058..477666 Listeria monocytogenes serotype 4b str. F2365 2798679 YP_013064.1 CDS LMOf2365_0457 NC_002973.6 477810 478076 D hypothetical protein 477810..478076 Listeria monocytogenes serotype 4b str. F2365 2798542 YP_013065.1 CDS LMOf2365_0458 NC_002973.6 478116 478472 D hypothetical protein 478116..478472 Listeria monocytogenes serotype 4b str. F2365 2798566 YP_013066.1 CDS LMOf2365_0459 NC_002973.6 478648 478902 D hypothetical protein 478648..478902 Listeria monocytogenes serotype 4b str. F2365 2798523 YP_013067.1 CDS LMOf2365_0460 NC_002973.6 478915 479082 D hypothetical protein 478915..479082 Listeria monocytogenes serotype 4b str. F2365 2798607 YP_013068.1 CDS LMOf2365_0461 NC_002973.6 479199 479693 D hypothetical protein 479199..479693 Listeria monocytogenes serotype 4b str. F2365 2797064 YP_013069.1 CDS LMOf2365_0462 NC_002973.6 479903 480169 D hypothetical protein 479903..480169 Listeria monocytogenes serotype 4b str. F2365 2798375 YP_013070.1 CDS LMOf2365_0463 NC_002973.6 480288 481076 D hypothetical protein 480288..481076 Listeria monocytogenes serotype 4b str. F2365 2798352 YP_013071.1 CDS LMOf2365_0464 NC_002973.6 481229 481894 D hypothetical protein 481229..481894 Listeria monocytogenes serotype 4b str. F2365 2798419 YP_013072.1 CDS LMOf2365_0465 NC_002973.6 482137 482376 R hypothetical protein complement(482137..482376) Listeria monocytogenes serotype 4b str. F2365 2798465 YP_013073.1 CDS LMOf2365_0466 NC_002973.6 482394 482981 D hypothetical protein 482394..482981 Listeria monocytogenes serotype 4b str. F2365 2798390 YP_013074.1 CDS LMOf2365_0467 NC_002973.6 483006 483152 D hypothetical protein 483006..483152 Listeria monocytogenes serotype 4b str. F2365 2798487 YP_013075.1 CDS LMOf2365_0468 NC_002973.6 483130 483705 D HEAT repeat-containing PBS lyase 483130..483705 Listeria monocytogenes serotype 4b str. F2365 2799466 YP_013076.1 CDS LMOf2365_0469 NC_002973.6 483744 483869 D hypothetical protein 483744..483869 Listeria monocytogenes serotype 4b str. F2365 2799474 YP_013077.1 CDS LMOf2365_0470 NC_002973.6 483988 484089 D hypothetical protein 483988..484089 Listeria monocytogenes serotype 4b str. F2365 2798451 YP_013078.1 CDS inlA NC_002973.6 484412 486814 D identified by similarity to SP:P25146; match to protein family HMM PF00560; match to protein family HMM PF00746; match to protein family HMM TIGR01167; internalin A 484412..486814 Listeria monocytogenes serotype 4b str. F2365 2798475 YP_013079.1 CDS LMOf2365_0473 NC_002973.6 488906 489373 R hypothetical protein complement(488906..489373) Listeria monocytogenes serotype 4b str. F2365 2799544 YP_013080.1 CDS LMOf2365_0474 NC_002973.6 489490 490335 D identified by similarity to SP:P39315; YtfG protein 489490..490335 Listeria monocytogenes serotype 4b str. F2365 2799186 YP_013081.1 CDS LMOf2365_0475 NC_002973.6 490530 491108 D hypothetical protein 490530..491108 Listeria monocytogenes serotype 4b str. F2365 2799504 YP_013082.1 CDS LMOf2365_0476 NC_002973.6 491141 492409 R identified by similarity to OMNI:NTL01LI0457; match to protein family HMM PF00668; hypothetical protein complement(491141..492409) Listeria monocytogenes serotype 4b str. F2365 2799056 YP_013083.1 CDS LMOf2365_0477 NC_002973.6 492547 493050 D hypothetical protein 492547..493050 Listeria monocytogenes serotype 4b str. F2365 2799146 YP_013084.1 CDS LMOf2365_0478 NC_002973.6 493092 495128 R identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF05223; penicillin-binding protein complement(493092..495128) Listeria monocytogenes serotype 4b str. F2365 2799206 YP_013085.1 CDS LMOf2365_0479 NC_002973.6 495300 495614 D identified by similarity to OMNI:NTL01LI0459; hypothetical protein 495300..495614 Listeria monocytogenes serotype 4b str. F2365 2799144 YP_013086.1 CDS LMOf2365_0480 NC_002973.6 495751 496680 D identified by similarity to SP:Q02115; match to protein family HMM PF03816; match to protein family HMM TIGR00350; transcriptional regulator 495751..496680 Listeria monocytogenes serotype 4b str. F2365 2799182 YP_013087.1 CDS LMOf2365_0481 NC_002973.6 496728 497276 R identified by similarity to GP:5578868; hypothetical protein complement(496728..497276) Listeria monocytogenes serotype 4b str. F2365 2799127 YP_013088.1 CDS LMOf2365_0482 NC_002973.6 497510 498235 D identified by similarity to OMNI:NTL01LI0463; hypothetical protein 497510..498235 Listeria monocytogenes serotype 4b str. F2365 2799797 YP_013089.1 CDS LMOf2365_0483 NC_002973.6 498279 498944 R identified by similarity to OMNI:NTL01LI0464; hypothetical protein complement(498279..498944) Listeria monocytogenes serotype 4b str. F2365 2798276 YP_013090.1 CDS LMOf2365_0484 NC_002973.6 498965 499720 R identified by similarity to OMNI:NTL01LI0465; hypothetical protein complement(498965..499720) Listeria monocytogenes serotype 4b str. F2365 2797766 YP_013091.1 CDS LMOf2365_0485 NC_002973.6 499837 501996 R identified by match to protein family HMM PF01841; peptidase complement(499837..501996) Listeria monocytogenes serotype 4b str. F2365 2797854 YP_013092.1 CDS LMOf2365_0486 NC_002973.6 501993 503141 R identified by similarity to OMNI:NTL01LI0467; match to protein family HMM PF01882; hypothetical protein complement(501993..503141) Listeria monocytogenes serotype 4b str. F2365 2797829 YP_013093.1 CDS LMOf2365_0487 NC_002973.6 503146 504093 R identified by match to protein family HMM PF01078; magnesium chelatase subunit ChII family protein complement(503146..504093) Listeria monocytogenes serotype 4b str. F2365 2798196 YP_013094.1 CDS LMOf2365_0488 NC_002973.6 504261 505844 D identified by similarity to GP:16412913; hypothetical protein 504261..505844 Listeria monocytogenes serotype 4b str. F2365 2797518 YP_013095.1 CDS LMOf2365_0489 NC_002973.6 505978 507261 D identified by match to protein family HMM PF02133; cytosine/purines uracil thiamine allantoin permease 505978..507261 Listeria monocytogenes serotype 4b str. F2365 2799398 YP_013096.1 CDS LMOf2365_0490 NC_002973.6 507262 508362 D identified by similarity to OMNI:NTL01LI0471; match to protein family HMM PF06032; hypothetical protein 507262..508362 Listeria monocytogenes serotype 4b str. F2365 2799382 YP_013097.1 CDS LMOf2365_0491 NC_002973.6 508355 509905 D identified by match to protein family HMM PF01968; match to protein family HMM PF05378; hydantoinase/oxoprolinase 508355..509905 Listeria monocytogenes serotype 4b str. F2365 2798081 YP_013098.1 CDS LMOf2365_0492 NC_002973.6 510079 510306 R hypothetical protein complement(510079..510306) Listeria monocytogenes serotype 4b str. F2365 2797396 YP_013099.1 CDS LMOf2365_0493 NC_002973.6 510541 512079 D hypothetical protein 510541..512079 Listeria monocytogenes serotype 4b str. F2365 2798897 YP_013100.1 CDS LMOf2365_0494 NC_002973.6 512381 514495 D identified by similarity to OMNI:NTL01LI0798; hypothetical protein 512381..514495 Listeria monocytogenes serotype 4b str. F2365 2798959 YP_013101.1 CDS LMOf2365_0495 NC_002973.6 514631 516700 D lipoprotein 514631..516700 Listeria monocytogenes serotype 4b str. F2365 2799854 YP_013102.1 CDS LMOf2365_0496 NC_002973.6 516766 517239 D hypothetical protein 516766..517239 Listeria monocytogenes serotype 4b str. F2365 2797080 YP_013103.1 CDS LMOf2365_0497 NC_002973.6 517259 517744 D hypothetical protein 517259..517744 Listeria monocytogenes serotype 4b str. F2365 2799874 YP_013104.1 CDS LMOf2365_0498 NC_002973.6 517796 518077 D identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 517796..518077 Listeria monocytogenes serotype 4b str. F2365 2799831 YP_013105.1 CDS LMOf2365_0499 NC_002973.6 518151 518417 D identified by similarity to OMNI:NTL01LL0091; IS3 family transposase OrfA 518151..518417 Listeria monocytogenes serotype 4b str. F2365 2799751 YP_013106.1 CDS LMOf2365_0500 NC_002973.6 518926 519102 D hypothetical protein 518926..519102 Listeria monocytogenes serotype 4b str. F2365 2799239 YP_013107.1 CDS LMOf2365_0501 NC_002973.6 519153 519770 D hypothetical protein 519153..519770 Listeria monocytogenes serotype 4b str. F2365 2799918 YP_013108.1 CDS LMOf2365_0502 NC_002973.6 520080 520424 D hypothetical protein 520080..520424 Listeria monocytogenes serotype 4b str. F2365 2798917 YP_013109.1 CDS LMOf2365_0503 NC_002973.6 520831 521073 D identified by similarity to OMNI:NTL01LI1685; hypothetical protein 520831..521073 Listeria monocytogenes serotype 4b str. F2365 2798071 YP_013110.1 CDS LMOf2365_0504 NC_002973.6 521156 522133 R identified by similarity to OMNI:NTL01BS00578; match to protein family HMM PF01966; HD domain-containing protein complement(521156..522133) Listeria monocytogenes serotype 4b str. F2365 2798968 YP_013111.1 CDS LMOf2365_0505 NC_002973.6 522237 522572 D identified by similarity to OMNI:NTL01LI0472; hypothetical protein 522237..522572 Listeria monocytogenes serotype 4b str. F2365 2798970 YP_013112.1 CDS LMOf2365_0506 NC_002973.6 523033 523392 D identified by similarity to OMNI:NTL01LI0477; hypothetical protein 523033..523392 Listeria monocytogenes serotype 4b str. F2365 2798881 YP_013113.1 CDS LMOf2365_0507 NC_002973.6 523644 524204 D identified by similarity to OMNI:NTL01LI0478; hypothetical protein 523644..524204 Listeria monocytogenes serotype 4b str. F2365 2798915 YP_013114.1 CDS LMOf2365_0508 NC_002973.6 524314 526014 D in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen 524314..526014 Listeria monocytogenes serotype 4b str. F2365 2798297 YP_013115.1 CDS LMOf2365_0509 NC_002973.6 526165 527268 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 526165..527268 Listeria monocytogenes serotype 4b str. F2365 2797600 YP_013116.1 CDS LMOf2365_0510 NC_002973.6 527358 527837 D identified by similarity to OMNI:NTL01LI0481; hypothetical protein 527358..527837 Listeria monocytogenes serotype 4b str. F2365 2798205 YP_013117.1 CDS LMOf2365_0511 NC_002973.6 527995 528360 D iron regulated; catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source; heme-degrading monooxygenase IsdG 527995..528360 Listeria monocytogenes serotype 4b str. F2365 2799860 YP_013118.1 CDS LMOf2365_0513 NC_002973.6 528853 530154 D identified by similarity to GP:16412606; hypothetical protein 528853..530154 Listeria monocytogenes serotype 4b str. F2365 2797618 YP_013119.1 CDS LMOf2365_0514 NC_002973.6 530167 530544 D hypothetical protein 530167..530544 Listeria monocytogenes serotype 4b str. F2365 2798219 YP_013120.1 CDS LMOf2365_0515 NC_002973.6 530778 531353 D identified by similarity to OMNI:NTL01LM0480; match to protein family HMM PF00881; hypothetical protein 530778..531353 Listeria monocytogenes serotype 4b str. F2365 2799914 YP_013121.1 CDS rpmF NC_002973.6 531418 531588 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 531418..531588 Listeria monocytogenes serotype 4b str. F2365 2799828 YP_013122.1 CDS LMOf2365_0517 NC_002973.6 531680 532408 D identified by match to protein family HMM PF00293; MutT/nudix family protein 531680..532408 Listeria monocytogenes serotype 4b str. F2365 2799641 YP_013123.1 CDS LMOf2365_0518 NC_002973.6 532445 533338 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(532445..533338) Listeria monocytogenes serotype 4b str. F2365 2799264 YP_013124.1 CDS LMOf2365_0519 NC_002973.6 533536 535530 D identified by match to protein family HMM PF00070; match to protein family HMM PF00724; NADH:flavin oxidoreductase 533536..535530 Listeria monocytogenes serotype 4b str. F2365 2799796 YP_013125.1 CDS aroE NC_002973.6 535630 536505 D AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 535630..536505 Listeria monocytogenes serotype 4b str. F2365 2798889 YP_013126.1 CDS aroD NC_002973.6 536571 537329 D catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis; 3-dehydroquinate dehydratase 536571..537329 Listeria monocytogenes serotype 4b str. F2365 2797406 YP_013127.1 CDS LMOf2365_0522 NC_002973.6 537398 538306 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(537398..538306) Listeria monocytogenes serotype 4b str. F2365 2798996 YP_013128.1 CDS LMOf2365_0523 NC_002973.6 538381 540141 R identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976; CocE/NonD family hydrolase complement(538381..540141) Listeria monocytogenes serotype 4b str. F2365 2797419 YP_013129.1 CDS LMOf2365_0524 NC_002973.6 540333 540926 D identified by match to protein family HMM PF00657; lipase/acylhydrolase 540333..540926 Listeria monocytogenes serotype 4b str. F2365 2799384 YP_013130.1 CDS LMOf2365_0525 NC_002973.6 541112 542071 D identified by match to protein family HMM PF00892; hypothetical protein 541112..542071 Listeria monocytogenes serotype 4b str. F2365 2799617 YP_013131.1 CDS LMOf2365_0526 NC_002973.6 542146 542370 D identified by similarity to OMNI:SP1473; match to protein family HMM PF05979; hypothetical protein 542146..542370 Listeria monocytogenes serotype 4b str. F2365 2799820 YP_013132.1 CDS rpiB-2 NC_002973.6 542537 542986 D identified by similarity to SP:P37351; match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120; ribose 5-phosphate isomerase B 542537..542986 Listeria monocytogenes serotype 4b str. F2365 2799793 YP_013133.1 CDS LMOf2365_0528 NC_002973.6 542983 543651 D identified by match to protein family HMM PF00834; ribulose-phosphate 3-epimerase 542983..543651 Listeria monocytogenes serotype 4b str. F2365 2799773 YP_013134.1 CDS LMOf2365_0529 NC_002973.6 543658 544308 D identified by match to protein family HMM PF00923; transaldolase 543658..544308 Listeria monocytogenes serotype 4b str. F2365 2798231 YP_013135.1 CDS LMOf2365_0530 NC_002973.6 544417 546477 D identified by match to protein family HMM PF00359; match to protein family HMM PF00874; PTS system IIA component domain-containing protein 544417..546477 Listeria monocytogenes serotype 4b str. F2365 2799913 YP_013136.1 CDS LMOf2365_0531 NC_002973.6 546481 547083 D identified by similarity to GP:16412942; match to protein family HMM PF01380; SIS domain-containing protein 546481..547083 Listeria monocytogenes serotype 4b str. F2365 2799906 YP_013137.1 CDS LMOf2365_0532 NC_002973.6 547111 547578 D identified by match to protein family HMM PF00359; PTS system transporter subunit IIA 547111..547578 Listeria monocytogenes serotype 4b str. F2365 2797599 YP_013138.1 CDS LMOf2365_0533 NC_002973.6 547595 547993 D identified by similarity to OMNI:NTL01LI0500; hypothetical protein 547595..547993 Listeria monocytogenes serotype 4b str. F2365 2797570 YP_013139.1 CDS rpe-1 NC_002973.6 548004 548654 D identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; ribulose-phosphate 3-epimerase 548004..548654 Listeria monocytogenes serotype 4b str. F2365 2798256 YP_013140.1 CDS LMOf2365_0535 NC_002973.6 548651 549697 D identified by match to protein family HMM PF00107; zinc-dependent alcohol dehydrogenase 548651..549697 Listeria monocytogenes serotype 4b str. F2365 2799576 YP_013141.1 CDS LMOf2365_0536 NC_002973.6 549713 550006 D identified by similarity to SP:P37188; match to protein family HMM PF02302; PTS system galactitol-specific transporter subunit IIB 549713..550006 Listeria monocytogenes serotype 4b str. F2365 2798106 YP_013142.1 CDS LMOf2365_0537 NC_002973.6 550021 551292 D identified by similarity to SP:P37189; match to protein family HMM PF03611; PTS system galactitol-specific transporter subunit IIC 550021..551292 Listeria monocytogenes serotype 4b str. F2365 2799379 YP_013143.1 CDS prs-2 NC_002973.6 551432 552367 D identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate pyrophosphokinase 551432..552367 Listeria monocytogenes serotype 4b str. F2365 2798065 YP_013144.1 CDS LMOf2365_0539 NC_002973.6 552989 553567 D identified by similarity to OMNI:NTL01LI0506; lipoprotein 552989..553567 Listeria monocytogenes serotype 4b str. F2365 2797414 YP_013145.1 CDS LMOf2365_0540 NC_002973.6 553674 554354 D identified by match to protein family HMM PF00117; glutamine amidotransferase 553674..554354 Listeria monocytogenes serotype 4b str. F2365 2798928 YP_013146.1 CDS LMOf2365_0541 NC_002973.6 554379 554738 R identified by similarity to OMNI:NTL01LI0508; hypothetical protein complement(554379..554738) Listeria monocytogenes serotype 4b str. F2365 2799562 YP_013147.1 CDS LMOf2365_0542 NC_002973.6 554745 555203 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(554745..555203) Listeria monocytogenes serotype 4b str. F2365 2799449 YP_013148.1 CDS LMOf2365_0543 NC_002973.6 555585 557414 D identified by match to protein family HMM PF00560; match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 555585..557414 Listeria monocytogenes serotype 4b str. F2365 2799881 YP_013149.1 CDS LMOf2365_0544 NC_002973.6 557515 557946 D identified by match to protein family HMM PF00582; universal stress protein 557515..557946 Listeria monocytogenes serotype 4b str. F2365 2798164 YP_013150.1 CDS LMOf2365_0545 NC_002973.6 557993 559423 R identified by similarity to OMNI:NTL01BS03583; CapA domain-containing protein complement(557993..559423) Listeria monocytogenes serotype 4b str. F2365 2797548 YP_013151.1 CDS LMOf2365_0546 NC_002973.6 559544 560359 R identified by match to protein family HMM PF00300; phosphoglycerate mutase complement(559544..560359) Listeria monocytogenes serotype 4b str. F2365 2797512 YP_013152.1 CDS LMOf2365_0547 NC_002973.6 560640 561008 R hypothetical protein complement(560640..561008) Listeria monocytogenes serotype 4b str. F2365 2797458 YP_013153.1 CDS LMOf2365_0548 NC_002973.6 561155 562570 D identified by similarity to SP:O35018; match to protein family HMM TIGR00711; EmrB/QacA family drug resistance transporter 561155..562570 Listeria monocytogenes serotype 4b str. F2365 2797134 YP_013154.1 CDS LMOf2365_0549 NC_002973.6 562702 563706 D identified by similarity to OMNI:NTL01LI0516; hypothetical protein 562702..563706 Listeria monocytogenes serotype 4b str. F2365 2797538 YP_013155.1 CDS LMOf2365_0550 NC_002973.6 563739 565055 R identified by match to protein family HMM PF02056; glycosyl hydrolase complement(563739..565055) Listeria monocytogenes serotype 4b str. F2365 2798173 YP_013156.1 CDS LMOf2365_0551 NC_002973.6 565257 566009 D identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family phosphosugar-binding transcriptional regulator 565257..566009 Listeria monocytogenes serotype 4b str. F2365 2797843 YP_013157.1 CDS LMOf2365_0552 NC_002973.6 566116 566559 D identified by similarity to OMNI:NTL01LI0524; hypothetical protein 566116..566559 Listeria monocytogenes serotype 4b str. F2365 2798172 YP_013158.1 CDS LMOf2365_0553 NC_002973.6 566605 568266 R identified by match to protein family HMM PF00916; match to protein family HMM PF01740; sulfate transporter family protein complement(566605..568266) Listeria monocytogenes serotype 4b str. F2365 2799515 YP_013159.1 CDS LMOf2365_0554 NC_002973.6 568321 568422 R hypothetical protein complement(568321..568422) Listeria monocytogenes serotype 4b str. F2365 2797446 YP_013160.1 CDS LMOf2365_0555 NC_002973.6 568406 569146 R identified by similarity to SP:P32184; match to protein family HMM PF00376; MerR family transcriptional regulator complement(568406..569146) Listeria monocytogenes serotype 4b str. F2365 2797529 YP_013161.1 CDS LMOf2365_0556 NC_002973.6 569376 570851 D hypothetical protein 569376..570851 Listeria monocytogenes serotype 4b str. F2365 2799799 YP_013162.1 CDS LMOf2365_0557 NC_002973.6 570844 572340 D identified by similarity to OMNI:NTL01LI0528; hypothetical protein 570844..572340 Listeria monocytogenes serotype 4b str. F2365 2797219 YP_013163.1 CDS LMOf2365_0558 NC_002973.6 572351 573601 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 572351..573601 Listeria monocytogenes serotype 4b str. F2365 2797119 YP_013164.1 CDS LMOf2365_0559 NC_002973.6 573617 575668 D identified by similarity to OMNI:NTL01LI0530; hypothetical protein 573617..575668 Listeria monocytogenes serotype 4b str. F2365 2797248 YP_013165.1 CDS LMOf2365_0560 NC_002973.6 575683 576537 D identified by similarity to OMNI:NTL01LI0531; hypothetical protein 575683..576537 Listeria monocytogenes serotype 4b str. F2365 2797560 YP_013166.1 CDS LMOf2365_0561 NC_002973.6 576597 577427 D identified by similarity to OMNI:NTL01LI0532; hypothetical protein 576597..577427 Listeria monocytogenes serotype 4b str. F2365 2797432 YP_013167.1 CDS LMOf2365_0562 NC_002973.6 577505 577774 D ACT domain-containing protein; hypothetical protein 577505..577774 Listeria monocytogenes serotype 4b str. F2365 2797240 YP_013168.1 CDS LMOf2365_0563 NC_002973.6 577793 579148 D identified by match to protein family HMM PF05167; hypothetical protein 577793..579148 Listeria monocytogenes serotype 4b str. F2365 2797218 YP_013169.1 CDS LMOf2365_0564 NC_002973.6 579188 580156 R identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator complement(579188..580156) Listeria monocytogenes serotype 4b str. F2365 2797209 YP_013170.1 CDS LMOf2365_0565 NC_002973.6 580328 581650 D identified by match to protein family HMM PF02056; glycosyl hydrolase 580328..581650 Listeria monocytogenes serotype 4b str. F2365 2797168 YP_013171.1 CDS LMOf2365_0566 NC_002973.6 581754 583025 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 581754..583025 Listeria monocytogenes serotype 4b str. F2365 2797151 YP_013172.1 CDS LMOf2365_0567 NC_002973.6 582991 584166 D identified by similarity to SP:P80092; match to protein family HMM PF01546; match to protein family HMM TIGR01891; carboxypeptidase 582991..584166 Listeria monocytogenes serotype 4b str. F2365 2797145 YP_013173.1 CDS LMOf2365_0568 NC_002973.6 584214 585230 R catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources; tagatose 1,6-diphosphate aldolase complement(584214..585230) Listeria monocytogenes serotype 4b str. F2365 2797301 YP_013174.1 CDS LMOf2365_0569 NC_002973.6 585467 586660 D identified by similarity to OMNI:NTL01BS01695; match to protein family HMM PF00144; penicillin-binding protein 585467..586660 Listeria monocytogenes serotype 4b str. F2365 2797025 YP_013175.1 CDS LMOf2365_0570 NC_002973.6 586701 587621 R identified by match to protein family HMM PF01497; ABC transporter substrate-binding protein complement(586701..587621) Listeria monocytogenes serotype 4b str. F2365 2797056 YP_013176.1 CDS srlB NC_002973.6 587732 588082 R identified by similarity to SP:P05706; match to protein family HMM PF03829; PTS system glucitol/sorbitol-specific transporter subunit IIA complement(587732..588082) Listeria monocytogenes serotype 4b str. F2365 2799873 YP_013177.1 CDS srlE NC_002973.6 588101 589087 R identified by similarity to GP:4928286; match to protein family HMM PF03612; PTS system glucitol/sorbitol-specific transporter subunit IIBC complement(588101..589087) Listeria monocytogenes serotype 4b str. F2365 2798212 YP_013178.1 CDS srlA NC_002973.6 589108 589629 R identified by similarity to SP:P56579; match to protein family HMM PF03608; PTS system glucitol/sorbitol-specific transporter subunit IIC complement(589108..589629) Listeria monocytogenes serotype 4b str. F2365 2798197 YP_013179.1 CDS LMOf2365_0574 NC_002973.6 589654 590034 R identified by similarity to OMNI:NTL01LI0545; hypothetical protein complement(589654..590034) Listeria monocytogenes serotype 4b str. F2365 2798191 YP_013180.1 CDS LMOf2365_0575 NC_002973.6 590089 591339 R identified by similarity to OMNI:NTL01LI0546; hypothetical protein complement(590089..591339) Listeria monocytogenes serotype 4b str. F2365 2797470 YP_013181.1 CDS LMOf2365_0576 NC_002973.6 591597 592544 R identified by similarity to SP:P39140; match to protein family HMM PF04198; DNA-binding transcriptional regulator complement(591597..592544) Listeria monocytogenes serotype 4b str. F2365 2797481 YP_013182.1 CDS LMOf2365_0577 NC_002973.6 592912 593577 D identified by similarity to GP:16412992; hypothetical protein 592912..593577 Listeria monocytogenes serotype 4b str. F2365 2799572 YP_013183.1 CDS LMOf2365_0578 NC_002973.6 593595 595628 D identified by match to protein family HMM PF00560; hypothetical protein 593595..595628 Listeria monocytogenes serotype 4b str. F2365 2798965 YP_013184.1 CDS LMOf2365_0579 NC_002973.6 595668 595964 D hypothetical protein 595668..595964 Listeria monocytogenes serotype 4b str. F2365 2799002 YP_013185.1 CDS LMOf2365_0580 NC_002973.6 596008 596850 D identified by similarity to OMNI:NTL01LI0551; hypothetical protein 596008..596850 Listeria monocytogenes serotype 4b str. F2365 2798907 YP_013186.1 CDS LMOf2365_0581 NC_002973.6 596926 597957 D identified by match to protein family HMM PF06030; hypothetical protein 596926..597957 Listeria monocytogenes serotype 4b str. F2365 2798870 YP_013187.1 CDS LMOf2365_0582 NC_002973.6 598014 598649 R identified by match to protein family HMM PF00571; hypothetical protein complement(598014..598649) Listeria monocytogenes serotype 4b str. F2365 2798039 YP_013188.1 CDS LMOf2365_0583 NC_002973.6 598871 600040 D identified by match to protein family HMM PF00465; alcohol dehydrogenase, iron-dependent 598871..600040 Listeria monocytogenes serotype 4b str. F2365 2798969 YP_013189.1 CDS LMOf2365_0584 NC_002973.6 600130 601608 D identified by similarity to SP:P36574; match to protein family HMM PF00854; match to protein family HMM TIGR00924; proton-dependent oligopeptide transporter 600130..601608 Listeria monocytogenes serotype 4b str. F2365 2797407 YP_013190.1 CDS LMOf2365_0585 NC_002973.6 601737 602444 D identified by match to protein family HMM PF00300; phosphoglycerate mutase 601737..602444 Listeria monocytogenes serotype 4b str. F2365 2799000 YP_013191.1 CDS LMOf2365_0586 NC_002973.6 602445 603140 D identified by match to protein family HMM PF00300; phosphoglycerate mutase 602445..603140 Listeria monocytogenes serotype 4b str. F2365 2799391 YP_013192.1 CDS LMOf2365_0587 NC_002973.6 603182 604222 R identified by similarity to OMNI:NTL01LI0563; hypothetical protein complement(603182..604222) Listeria monocytogenes serotype 4b str. F2365 2798268 YP_013193.1 CDS LMOf2365_0588 NC_002973.6 604622 605527 D identified by match to protein family HMM PF01544; magnesium transporter CorA family protein 604622..605527 Listeria monocytogenes serotype 4b str. F2365 2797001 YP_013194.1 CDS gdhA NC_002973.6 605570 606946 R converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase complement(605570..606946) Listeria monocytogenes serotype 4b str. F2365 2797150 YP_013195.1 CDS hisE NC_002973.6 607439 607750 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase complement(607439..607750) Listeria monocytogenes serotype 4b str. F2365 2799199 YP_013196.1 CDS hisI NC_002973.6 607751 608068 R PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase complement(607751..608068) Listeria monocytogenes serotype 4b str. F2365 2797375 YP_013197.1 CDS hisF NC_002973.6 608065 608820 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(608065..608820) Listeria monocytogenes serotype 4b str. F2365 2799414 YP_013198.1 CDS hisA NC_002973.6 608810 609532 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(608810..609532) Listeria monocytogenes serotype 4b str. F2365 2799429 YP_013199.1 CDS hisH NC_002973.6 609511 610137 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(609511..610137) Listeria monocytogenes serotype 4b str. F2365 2798974 YP_013200.1 CDS hisB NC_002973.6 610138 610722 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(610138..610722) Listeria monocytogenes serotype 4b str. F2365 2798930 YP_013201.1 CDS hisD NC_002973.6 610723 612006 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(610723..612006) Listeria monocytogenes serotype 4b str. F2365 2798888 YP_013202.1 CDS hisG NC_002973.6 612003 612644 R short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit complement(612003..612644) Listeria monocytogenes serotype 4b str. F2365 2798102 YP_013203.1 CDS hisZ NC_002973.6 612644 613822 R May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit complement(612644..613822) Listeria monocytogenes serotype 4b str. F2365 2798902 YP_013204.1 CDS hisK NC_002973.6 613974 614801 D catalyzes the formation of L-histidinol from L-histidinol phosphate; histidinol-phosphatase 613974..614801 Listeria monocytogenes serotype 4b str. F2365 2799380 YP_013205.1 CDS ogt-1 NC_002973.6 614786 615082 R identified by similarity to SP:P37429; match to protein family HMM PF01035; match to protein family HMM TIGR00589; methylated-DNA--protein-cysteine methyltransferase complement(614786..615082) Listeria monocytogenes serotype 4b str. F2365 2797393 YP_013206.1 CDS LMOf2365_0601 NC_002973.6 615159 616190 D identified by similarity to OMNI:NTL01LI0577; hypothetical protein 615159..616190 Listeria monocytogenes serotype 4b str. F2365 2798910 YP_013207.1 CDS LMOf2365_0602 NC_002973.6 616233 617528 R identified by match to protein family HMM PF00860; xanthine/uracil permease complement(616233..617528) Listeria monocytogenes serotype 4b str. F2365 2799411 YP_013208.1 CDS LMOf2365_0603 NC_002973.6 617844 619238 D identified by match to protein family HMM PF00232; glycosyl hydrolase 617844..619238 Listeria monocytogenes serotype 4b str. F2365 2798257 YP_013209.1 CDS LMOf2365_0604 NC_002973.6 619282 620010 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 619282..620010 Listeria monocytogenes serotype 4b str. F2365 2797480 YP_013210.1 CDS LMOf2365_0605 NC_002973.6 620459 621922 D identified by similarity to OMNI:NTL01LI0581; hypothetical protein 620459..621922 Listeria monocytogenes serotype 4b str. F2365 2797445 YP_013211.1 CDS LMOf2365_0606 NC_002973.6 621977 622435 R identified by similarity to OMNI:SA0807; hypothetical protein complement(621977..622435) Listeria monocytogenes serotype 4b str. F2365 2797494 YP_013212.1 CDS LMOf2365_0607 NC_002973.6 622449 623201 R identified by similarity to OMNI:NTL01LI0583; hypothetical protein complement(622449..623201) Listeria monocytogenes serotype 4b str. F2365 2797488 YP_013213.1 CDS LMOf2365_0608 NC_002973.6 623330 623575 D identified by similarity to GP:16413028; hypothetical protein 623330..623575 Listeria monocytogenes serotype 4b str. F2365 2797457 YP_013214.1 CDS LMOf2365_0609 NC_002973.6 623591 624253 D identified by match to protein family HMM PF02230; phospholipase/carboxylesterase 623591..624253 Listeria monocytogenes serotype 4b str. F2365 2797469 YP_013215.1 CDS LMOf2365_0610 NC_002973.6 624284 625468 R identified by similarity to OMNI:NTL01LI0586; hypothetical protein complement(624284..625468) Listeria monocytogenes serotype 4b str. F2365 2797450 YP_013216.1 CDS iap NC_002973.6 625556 626989 R iap; p60; autolytic enzyme; can cleave bacterial peptidoglycan; secreted by SecA2 system; invasion associated secreted endopeptidase complement(625556..626989) Listeria monocytogenes serotype 4b str. F2365 2797439 YP_013217.1 CDS LMOf2365_0612 NC_002973.6 627408 629738 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, especially gram positive pathogens, have paralogs that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 627408..629738 Listeria monocytogenes serotype 4b str. F2365 2797464 YP_013218.1 CDS LMOf2365_0613 NC_002973.6 629854 631026 D identified by match to protein family HMM PF01594; hypothetical protein 629854..631026 Listeria monocytogenes serotype 4b str. F2365 2797254 YP_013219.1 CDS LMOf2365_0614 NC_002973.6 631284 631997 D identified by similarity to OMNI:NTL01LI0590; hypothetical protein 631284..631997 Listeria monocytogenes serotype 4b str. F2365 2797244 YP_013220.1 CDS LMOf2365_0615 NC_002973.6 632065 633090 D identified by similarity to GP:16413035; match to protein family HMM PF06030; hypothetical protein 632065..633090 Listeria monocytogenes serotype 4b str. F2365 2797427 YP_013221.1 CDS LMOf2365_0616 NC_002973.6 633108 635573 D identified by similarity to GP:16413036; hypothetical protein 633108..635573 Listeria monocytogenes serotype 4b str. F2365 2797235 YP_013222.1 CDS phrB NC_002973.6 635685 637088 D identified by similarity to SP:P25078; match to protein family HMM PF00875; match to protein family HMM PF03441; deoxyribodipyrimidine photolyase 635685..637088 Listeria monocytogenes serotype 4b str. F2365 2797223 YP_013223.1 CDS LMOf2365_0618 NC_002973.6 637226 637639 D identified by similarity to OMNI:NTL01LI0594; hypothetical protein 637226..637639 Listeria monocytogenes serotype 4b str. F2365 2797213 YP_013224.1 CDS LMOf2365_0619 NC_002973.6 637639 639408 D identified by similarity to GP:16413039; match to protein family HMM PF02645; match to protein family HMM PF02734; DAK2 domain-containing protein 637639..639408 Listeria monocytogenes serotype 4b str. F2365 2797196 YP_013225.1 CDS LMOf2365_0620 NC_002973.6 639405 640178 D hypothetical protein 639405..640178 Listeria monocytogenes serotype 4b str. F2365 2797189 YP_013226.1 CDS LMOf2365_0621 NC_002973.6 640306 640848 D identified by similarity to OMNI:NTL01LI0597; hypothetical protein 640306..640848 Listeria monocytogenes serotype 4b str. F2365 2797173 YP_013227.1 CDS LMOf2365_0622 NC_002973.6 641099 641875 D identified by similarity to SP:P11097; match to protein family HMM PF01226; formate/nitrite transporter family protein 641099..641875 Listeria monocytogenes serotype 4b str. F2365 2797177 YP_013228.1 CDS metX NC_002973.6 641913 643019 R Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase complement(641913..643019) Listeria monocytogenes serotype 4b str. F2365 2797156 YP_013229.1 CDS LMOf2365_0624 NC_002973.6 643036 644313 R identified by similarity to GP:15777939; match to protein family HMM PF01053; match to protein family HMM TIGR01326; O-acetylhomoserine (thiol)-lyase complement(643036..644313) Listeria monocytogenes serotype 4b str. F2365 2797125 YP_013230.1 CDS LMOf2365_0625 NC_002973.6 644760 645287 D identified by match to protein family HMM PF03729; hypothetical protein 644760..645287 Listeria monocytogenes serotype 4b str. F2365 2797603 YP_013231.1 CDS LMOf2365_0626 NC_002973.6 645376 646077 R identified by match to protein family HMM PF00027; cyclic nucleotide-binding protein complement(645376..646077) Listeria monocytogenes serotype 4b str. F2365 2797204 YP_013232.1 CDS LMOf2365_0627 NC_002973.6 646153 646701 R identified by match to protein family HMM PF02632; BioY family protein complement(646153..646701) Listeria monocytogenes serotype 4b str. F2365 2799646 YP_013233.1 CDS LMOf2365_0628 NC_002973.6 646895 647227 D identified by match to protein family HMM PF03551; PadR family transcriptional regulator 646895..647227 Listeria monocytogenes serotype 4b str. F2365 2797511 YP_013234.1 CDS LMOf2365_0629 NC_002973.6 647220 647810 D identified by similarity to OMNI:NTL01LI0605; hypothetical protein 647220..647810 Listeria monocytogenes serotype 4b str. F2365 2797226 YP_013235.1 CDS LMOf2365_0630 NC_002973.6 647803 648903 D hypothetical protein 647803..648903 Listeria monocytogenes serotype 4b str. F2365 2797147 YP_013236.1 CDS LMOf2365_0631 NC_002973.6 649009 649509 D identified by similarity to OMNI:NTL01LI0607; match to protein family HMM PF00583; acetyltransferase 649009..649509 Listeria monocytogenes serotype 4b str. F2365 2797547 YP_013237.1 CDS LMOf2365_0632 NC_002973.6 649557 649943 R identified by similarity to OMNI:NTL01LI0608; hypothetical protein complement(649557..649943) Listeria monocytogenes serotype 4b str. F2365 2797520 YP_013238.1 CDS LMOf2365_0633 NC_002973.6 649997 650341 R identified by similarity to OMNI:NTL01LI0609; hypothetical protein complement(649997..650341) Listeria monocytogenes serotype 4b str. F2365 2799340 YP_013239.1 CDS LMOf2365_0634 NC_002973.6 650490 651830 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; hypothetical protein complement(650490..651830) Listeria monocytogenes serotype 4b str. F2365 2798282 YP_013240.1 CDS LMOf2365_0635 NC_002973.6 651996 652457 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 651996..652457 Listeria monocytogenes serotype 4b str. F2365 2799478 YP_013241.1 CDS LMOf2365_0636 NC_002973.6 652465 654189 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 652465..654189 Listeria monocytogenes serotype 4b str. F2365 2799339 YP_013242.1 CDS LMOf2365_0637 NC_002973.6 654186 656003 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 654186..656003 Listeria monocytogenes serotype 4b str. F2365 2799342 YP_013243.1 CDS LMOf2365_0638 NC_002973.6 656120 656419 D identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein 656120..656419 Listeria monocytogenes serotype 4b str. F2365 2799341 YP_013244.1 CDS LMOf2365_0639 NC_002973.6 656462 658231 R identified by match to protein family HMM PF00560; match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall anchor domain-containing protein complement(656462..658231) Listeria monocytogenes serotype 4b str. F2365 2798263 YP_013245.1 CDS acpD NC_002973.6 658392 659018 R FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase complement(658392..659018) Listeria monocytogenes serotype 4b str. F2365 2798183 YP_013246.1 CDS LMOf2365_0641 NC_002973.6 659187 659636 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 659187..659636 Listeria monocytogenes serotype 4b str. F2365 2798204 YP_013247.1 CDS LMOf2365_0642 NC_002973.6 659639 660580 D identified by match to protein family HMM PF00107; zinc-dependent alcohol dehydrogenase 659639..660580 Listeria monocytogenes serotype 4b str. F2365 2798161 YP_013248.1 CDS LMOf2365_0643 NC_002973.6 660675 661208 D identified by similarity to OMNI:EF0951; match to protein family HMM PF00583; acetyltransferase 660675..661208 Listeria monocytogenes serotype 4b str. F2365 2797556 YP_013249.1 CDS LMOf2365_0644 NC_002973.6 661205 661447 R identified by similarity to OMNI:NTL01LI0620; hypothetical protein complement(661205..661447) Listeria monocytogenes serotype 4b str. F2365 2797534 YP_013250.1 CDS LMOf2365_0645 NC_002973.6 661554 663305 D identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase 661554..663305 Listeria monocytogenes serotype 4b str. F2365 2797542 YP_013251.1 CDS LMOf2365_0646 NC_002973.6 663344 663838 R lipoprotein complement(663344..663838) Listeria monocytogenes serotype 4b str. F2365 2797524 YP_013252.1 CDS LMOf2365_0647 NC_002973.6 663918 665060 R identified by match to protein family HMM PF00069; protein kinase domain-containing protein complement(663918..665060) Listeria monocytogenes serotype 4b str. F2365 2797118 YP_013253.1 CDS LMOf2365_0648 NC_002973.6 665167 665622 D identified by similarity to OMNI:NTL01LI0624; hypothetical protein 665167..665622 Listeria monocytogenes serotype 4b str. F2365 2797563 YP_013254.1 CDS LMOf2365_0649 NC_002973.6 665678 666070 D identified by similarity to OMNI:NTL01LI0625; hypothetical protein 665678..666070 Listeria monocytogenes serotype 4b str. F2365 2797391 YP_013255.1 CDS LMOf2365_0650 NC_002973.6 666167 666907 D identified by similarity to OMNI:NTL01LI0626; match to protein family HMM PF01925; hypothetical protein 666167..666907 Listeria monocytogenes serotype 4b str. F2365 2797420 YP_013256.1 CDS LMOf2365_0651 NC_002973.6 666993 667271 D identified by similarity to OMNI:NTL01LI0627; hypothetical protein 666993..667271 Listeria monocytogenes serotype 4b str. F2365 2798913 YP_013257.1 CDS LMOf2365_0652 NC_002973.6 667288 667566 D identified by similarity to OMNI:NTL01LI0628; hypothetical protein 667288..667566 Listeria monocytogenes serotype 4b str. F2365 2798925 YP_013258.1 CDS LMOf2365_0653 NC_002973.6 667594 668037 R identified by match to protein family HMM PF00583; acetyltransferase complement(667594..668037) Listeria monocytogenes serotype 4b str. F2365 2798094 YP_013259.1 CDS LMOf2365_0654 NC_002973.6 668068 668769 R identified by match to protein family HMM PF00657; lipase/acylhydrolase complement(668068..668769) Listeria monocytogenes serotype 4b str. F2365 2797418 YP_013260.1 CDS LMOf2365_0655 NC_002973.6 668854 670533 R hypothetical protein complement(668854..670533) Listeria monocytogenes serotype 4b str. F2365 2798293 YP_013261.1 CDS LMOf2365_0656 NC_002973.6 670836 675596 D identified by match to protein family HMM PF05738; match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein 670836..675596 Listeria monocytogenes serotype 4b str. F2365 2799427 YP_013262.1 CDS LMOf2365_0657 NC_002973.6 675693 675968 D identified by similarity to OMNI:NTL01LI0633; hypothetical protein 675693..675968 Listeria monocytogenes serotype 4b str. F2365 2799402 YP_013263.1 CDS LMOf2365_0658 NC_002973.6 676011 676538 D identified by match to protein family HMM PF00857; isochorismatase superfamily hydrolase 676011..676538 Listeria monocytogenes serotype 4b str. F2365 2797699 YP_013264.1 CDS LMOf2365_0659 NC_002973.6 676899 678929 D identified by match to protein family HMM PF00359; match to protein family HMM PF00874; PTS system IIA component domain-containing protein 676899..678929 Listeria monocytogenes serotype 4b str. F2365 2797748 YP_013265.1 CDS LMOf2365_0660 NC_002973.6 678931 679383 D identified by similarity to SP:P32155; match to protein family HMM PF00359; match to protein family HMM TIGR00848; PTS system fructose-specific transporter subunit IIA 678931..679383 Listeria monocytogenes serotype 4b str. F2365 2797729 YP_013266.1 CDS LMOf2365_0661 NC_002973.6 679384 680445 D FrwC with FrwB, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; forms translocation channel and contains the specific substrate-binding site; fructose-like permease EIIC subunit 2 679384..680445 Listeria monocytogenes serotype 4b str. F2365 2797780 YP_013267.1 CDS LMOf2365_0662 NC_002973.6 680460 680768 D FrwB with FrwC, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell; cytoplasmic protein that interacts with complex EIIA; contains the second phosphorylation site of the PTS; PTS system fructose-like transporter subunit EIIB 680460..680768 Listeria monocytogenes serotype 4b str. F2365 2798198 YP_013268.1 CDS LMOf2365_0663 NC_002973.6 680795 682063 D identified by similarity to GP:15978906; hypothetical protein 680795..682063 Listeria monocytogenes serotype 4b str. F2365 2799533 YP_013269.1 CDS LMOf2365_0664 NC_002973.6 682153 682857 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549; HAD family hydrolase 682153..682857 Listeria monocytogenes serotype 4b str. F2365 2799532 YP_013270.1 CDS LMOf2365_0665 NC_002973.6 682962 683378 D identified by similarity to OMNI:NTL01BH0657; match to protein family HMM PF02082; match to protein family HMM TIGR00738; Rrf2 family protein 682962..683378 Listeria monocytogenes serotype 4b str. F2365 2797900 YP_013271.1 CDS LMOf2365_0666 NC_002973.6 683391 683984 D identified by match to protein family HMM PF01209; UbiE/COQ5 family methlytransferase 683391..683984 Listeria monocytogenes serotype 4b str. F2365 2796999 YP_013272.1 CDS LMOf2365_0667 NC_002973.6 684684 685355 D identified by similarity to OMNI:SP2182; hypothetical protein 684684..685355 Listeria monocytogenes serotype 4b str. F2365 2797890 YP_013273.1 CDS LMOf2365_0668 NC_002973.6 685385 685570 D hypothetical protein 685385..685570 Listeria monocytogenes serotype 4b str. F2365 2799739 YP_013274.1 CDS LMOf2365_0670 NC_002973.6 686111 686644 D identified by similarity to GP:425488; transcriptional regulator 686111..686644 Listeria monocytogenes serotype 4b str. F2365 2797874 YP_013275.1 CDS LMOf2365_0671 NC_002973.6 686708 687625 D identified by match to protein family HMM PF00248; aldo/keto reductase oxidoreductase 686708..687625 Listeria monocytogenes serotype 4b str. F2365 2797717 YP_013276.1 CDS cadA NC_002973.6 687891 689771 D identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525; cadmium-translocating P-type ATPase 687891..689771 Listeria monocytogenes serotype 4b str. F2365 2797838 YP_013277.1 CDS LMOf2365_0673 NC_002973.6 689866 690594 D hypothetical protein 689866..690594 Listeria monocytogenes serotype 4b str. F2365 2797651 YP_013278.1 CDS LMOf2365_0674 NC_002973.6 690734 691384 D identified by match to protein family HMM PF00923; transaldolase 690734..691384 Listeria monocytogenes serotype 4b str. F2365 2797735 YP_013279.1 CDS LMOf2365_0675 NC_002973.6 691427 693268 R identified by match to protein family HMM PF00884; sulfatase complement(691427..693268) Listeria monocytogenes serotype 4b str. F2365 2797726 YP_013280.1 CDS LMOf2365_0676 NC_002973.6 693482 694873 D identified by match to protein family HMM PF00324; amino acid permease 693482..694873 Listeria monocytogenes serotype 4b str. F2365 2797690 YP_013281.1 CDS LMOf2365_0677 NC_002973.6 694963 695802 D identified by similarity to OMNI:EF0656; match to protein family HMM PF00903; glyoxalase 694963..695802 Listeria monocytogenes serotype 4b str. F2365 2797657 YP_013282.1 CDS LMOf2365_0678 NC_002973.6 695885 696169 R identified by similarity to OMNI:NTL01LI0646; hypothetical protein complement(695885..696169) Listeria monocytogenes serotype 4b str. F2365 2797806 YP_013283.1 CDS LMOf2365_0679 NC_002973.6 696267 697217 D identified by match to protein family HMM PF01544; magnesium transporter CorA family protein 696267..697217 Listeria monocytogenes serotype 4b str. F2365 2797809 YP_013284.1 CDS LMOf2365_0680 NC_002973.6 697241 697882 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 697241..697882 Listeria monocytogenes serotype 4b str. F2365 2797929 YP_013285.1 CDS LMOf2365_0681 NC_002973.6 697925 700615 D identified by similarity to SP:P49022; match to protein family HMM TIGR01612; phage infection protein 697925..700615 Listeria monocytogenes serotype 4b str. F2365 2799630 YP_013286.1 CDS LMOf2365_0682 NC_002973.6 700661 701308 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 700661..701308 Listeria monocytogenes serotype 4b str. F2365 2797467 YP_013287.1 CDS LMOf2365_0683 NC_002973.6 701318 701854 R identified by similarity to OMNI:PG1761; match to protein family HMM PF00583; acetyltransferase complement(701318..701854) Listeria monocytogenes serotype 4b str. F2365 2797844 YP_013288.1 CDS LMOf2365_0684 NC_002973.6 701841 702827 R identified by similarity to OMNI:NTL01LI0652; match to protein family HMM PF06161; hypothetical protein complement(701841..702827) Listeria monocytogenes serotype 4b str. F2365 2797882 YP_013289.1 CDS LMOf2365_0685 NC_002973.6 702982 703224 D identified by similarity to OMNI:NTL01LI0653; hypothetical protein 702982..703224 Listeria monocytogenes serotype 4b str. F2365 2797857 YP_013290.1 CDS LMOf2365_0686 NC_002973.6 703292 703999 D identified by match to protein family HMM PF00149; serine/threonine protein phosphatase 703292..703999 Listeria monocytogenes serotype 4b str. F2365 2797706 YP_013291.1 CDS LMOf2365_0687 NC_002973.6 704427 706565 D identified by similarity to OMNI:NTL01HP01062; hypothetical protein 704427..706565 Listeria monocytogenes serotype 4b str. F2365 2797642 YP_013292.1 CDS LMOf2365_0688 NC_002973.6 706695 707258 R identified by match to protein family HMM PF04238; hypothetical protein complement(706695..707258) Listeria monocytogenes serotype 4b str. F2365 2797836 YP_013293.1 CDS LMOf2365_0689 NC_002973.6 707378 707794 D identified by similarity to OMNI:NTL01LI0656; hypothetical protein 707378..707794 Listeria monocytogenes serotype 4b str. F2365 2798067 YP_013294.1 CDS LMOf2365_0690 NC_002973.6 707837 708466 D identified by match to protein family HMM PF00730; endonuclease 707837..708466 Listeria monocytogenes serotype 4b str. F2365 2797376 YP_013295.1 CDS LMOf2365_0691 NC_002973.6 708463 709359 R identified by match to protein family HMM PF01381; match to protein family HMM TIGR01716; transcriptional activator complement(708463..709359) Listeria monocytogenes serotype 4b str. F2365 2799413 YP_013296.1 CDS LMOf2365_0692 NC_002973.6 709593 709874 D identified by similarity to OMNI:NTL01LL0091; match to protein family HMM PF01527; IS3 family transposase OrfA 709593..709874 Listeria monocytogenes serotype 4b str. F2365 2797387 YP_013297.1 CDS LMOf2365_0693 NC_002973.6 710152 712626 D identified by match to protein family HMM TIGR01167; cell wall surface anchor family protein 710152..712626 Listeria monocytogenes serotype 4b str. F2365 2799390 YP_013298.1 CDS LMOf2365_0693.1 NC_002973.6 712807 713478 D identified by similarity to PIR:AB1110; hypothetical protein 712807..713478 Listeria monocytogenes serotype 4b str. F2365 2799396 YP_013299.1 CDS LMOf2365_0694 NC_002973.6 713667 715283 D identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 713667..715283 Listeria monocytogenes serotype 4b str. F2365 2798043 YP_013300.1 CDS LMOf2365_0695 NC_002973.6 715369 715677 R identified by match to protein family HMM PF02627; carboxymuconolactone decarboxylase complement(715369..715677) Listeria monocytogenes serotype 4b str. F2365 2798994 YP_013301.1 CDS thiD-2 NC_002973.6 715740 716555 R identified by match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase complement(715740..716555) Listeria monocytogenes serotype 4b str. F2365 2797404 YP_013302.1 CDS LMOf2365_0697 NC_002973.6 716581 717447 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; cof family hydrolase complement(716581..717447) Listeria monocytogenes serotype 4b str. F2365 2798951 YP_013303.1 CDS LMOf2365_0698 NC_002973.6 717621 718184 D identified by similarity to OMNI:SP0074; match to protein family HMM PF00132; acetyltransferase 717621..718184 Listeria monocytogenes serotype 4b str. F2365 2797584 YP_013304.1 CDS LMOf2365_0699 NC_002973.6 718181 718444 D identified by similarity to OMNI:NTL01LI0666; hypothetical protein 718181..718444 Listeria monocytogenes serotype 4b str. F2365 2799591 YP_013305.1 CDS LMOf2365_0700 NC_002973.6 718454 718831 D identified by match to protein family HMM PF04241; hypothetical protein 718454..718831 Listeria monocytogenes serotype 4b str. F2365 2798318 YP_013306.1 CDS LMOf2365_0701 NC_002973.6 718945 719880 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 718945..719880 Listeria monocytogenes serotype 4b str. F2365 2799809 YP_013307.1 CDS LMOf2365_0702 NC_002973.6 719873 720643 D identified by match to protein family HMM PF01061; ABC transporter permease 719873..720643 Listeria monocytogenes serotype 4b str. F2365 2797850 YP_013308.1 CDS LMOf2365_0703 NC_002973.6 720762 720893 D hypothetical protein 720762..720893 Listeria monocytogenes serotype 4b str. F2365 2797725 YP_013309.1 CDS LMOf2365_0704 NC_002973.6 720906 721787 D identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase oxidoreductase 720906..721787 Listeria monocytogenes serotype 4b str. F2365 2798271 YP_013310.1 CDS LMOf2365_0705 NC_002973.6 721805 721981 D identified by similarity to OMNI:NTL01LI0671; hypothetical protein 721805..721981 Listeria monocytogenes serotype 4b str. F2365 2797601 YP_013311.1 CDS LMOf2365_0707 NC_002973.6 723238 723339 D hypothetical protein 723238..723339 Listeria monocytogenes serotype 4b str. F2365 2797951 YP_013312.1 CDS LMOf2365_0708 NC_002973.6 723626 724054 D identified by match to protein family HMM PF05656; hypothetical protein 723626..724054 Listeria monocytogenes serotype 4b str. F2365 2799534 YP_013313.1 CDS LMOf2365_0709 NC_002973.6 724093 724302 R identified by similarity to OMNI:NTL01LI0677; hypothetical protein complement(724093..724302) Listeria monocytogenes serotype 4b str. F2365 2797938 YP_013314.1 CDS LMOf2365_0710 NC_002973.6 724321 725241 R identified by similarity to OMNI:NTL01LI0678; hypothetical protein complement(724321..725241) Listeria monocytogenes serotype 4b str. F2365 2797009 YP_013315.1 CDS LMOf2365_0711 NC_002973.6 725613 725927 D identified by similarity to OMNI:NTL01LI0679; hypothetical protein 725613..725927 Listeria monocytogenes serotype 4b str. F2365 2797687 YP_013316.1 CDS fliP NC_002973.6 725920 726687 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 725920..726687 Listeria monocytogenes serotype 4b str. F2365 2797579 YP_013317.1 CDS fliQ NC_002973.6 726700 726972 D with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 726700..726972 Listeria monocytogenes serotype 4b str. F2365 2799383 YP_013318.1 CDS fliR NC_002973.6 726975 727736 D FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 726975..727736 Listeria monocytogenes serotype 4b str. F2365 2798872 YP_013319.1 CDS flhB NC_002973.6 727752 728798 D membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 727752..728798 Listeria monocytogenes serotype 4b str. F2365 2798299 YP_013320.1 CDS flhA NC_002973.6 728845 730920 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 728845..730920 Listeria monocytogenes serotype 4b str. F2365 2798932 YP_013321.1 CDS LMOf2365_0717 NC_002973.6 730942 732165 D Positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 730942..732165 Listeria monocytogenes serotype 4b str. F2365 2797398 YP_013322.1 CDS flgG NC_002973.6 732162 732941 D makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 732162..732941 Listeria monocytogenes serotype 4b str. F2365 2798049 YP_013323.1 CDS cheR NC_002973.6 732970 733758 D identified by similarity to SP:P31105; match to protein family HMM PF01739; match to protein family HMM PF03705; chemotaxis protein CheR 732970..733758 Listeria monocytogenes serotype 4b str. F2365 2798046 YP_013324.1 CDS LMOf2365_0720 NC_002973.6 733783 734118 D identified by similarity to OMNI:NTL01LI0688; hypothetical protein 733783..734118 Listeria monocytogenes serotype 4b str. F2365 2798957 YP_013325.1 CDS motA NC_002973.6 734145 734996 D With Mot B forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein MotA 734145..734996 Listeria monocytogenes serotype 4b str. F2365 2797384 YP_013326.1 CDS motB NC_002973.6 734956 735783 D identified by similarity to SP:P28612; match to protein family HMM PF00691; chemotaxis protein MotB 734956..735783 Listeria monocytogenes serotype 4b str. F2365 2799434 YP_013327.1 CDS LMOf2365_0723 NC_002973.6 735784 736293 D identified by similarity to OMNI:NTL01LI0691; hypothetical protein 735784..736293 Listeria monocytogenes serotype 4b str. F2365 2798254 YP_013328.1 CDS LMOf2365_0724 NC_002973.6 736316 738229 D identified by match to protein family HMM PF00515; match to protein family HMM PF00535; glycosyl transferase family protein 736316..738229 Listeria monocytogenes serotype 4b str. F2365 2798961 YP_013329.1 CDS cheV NC_002973.6 738242 739150 D identified by similarity to SP:P37599; match to protein family HMM PF00072; match to protein family HMM PF01584; chemotaxis protein CheV 738242..739150 Listeria monocytogenes serotype 4b str. F2365 2798007 YP_013330.1 CDS LMOf2365_0726 NC_002973.6 739388 740251 D structural flagella protein; flagellin 739388..740251 Listeria monocytogenes serotype 4b str. F2365 2797839 YP_013331.1 CDS cheY NC_002973.6 740526 740885 D identified by similarity to SP:P24072; match to protein family HMM PF00072; chemotaxis protein CheY 740526..740885 Listeria monocytogenes serotype 4b str. F2365 2797339 YP_013332.1 CDS cheA NC_002973.6 740905 742761 D identified by similarity to SP:P29072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895; chemotaxis protein CheA 740905..742761 Listeria monocytogenes serotype 4b str. F2365 2797307 YP_013333.1 CDS LMOf2365_0729 NC_002973.6 742774 743073 D identified by match to protein family HMM PF01052; flagellar motor switch protein 742774..743073 Listeria monocytogenes serotype 4b str. F2365 2799747 YP_013334.1 CDS LMOf2365_0730 NC_002973.6 743092 743502 D identified by similarity to GP:16413154; hypothetical protein 743092..743502 Listeria monocytogenes serotype 4b str. F2365 2799643 YP_013335.1 CDS LMOf2365_0731 NC_002973.6 743518 744564 D identified by similarity to OMNI:NTL01LI0699; hypothetical protein 743518..744564 Listeria monocytogenes serotype 4b str. F2365 2797986 YP_013336.1 CDS flgD NC_002973.6 744566 744988 D acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; flagellar basal body rod modification protein 744566..744988 Listeria monocytogenes serotype 4b str. F2365 2798011 YP_013337.1 CDS flgE NC_002973.6 745008 746243 D the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 745008..746243 Listeria monocytogenes serotype 4b str. F2365 2797288 YP_013338.1 CDS LMOf2365_0734 NC_002973.6 746257 746493 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 746257..746493 Listeria monocytogenes serotype 4b str. F2365 2797282 YP_013339.1 CDS fliM NC_002973.6 746514 747506 D with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 746514..747506 Listeria monocytogenes serotype 4b str. F2365 2797302 YP_013340.1 CDS LMOf2365_0736 NC_002973.6 747542 749056 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 747542..749056 Listeria monocytogenes serotype 4b str. F2365 2797296 YP_013341.1 CDS LMOf2365_0737 NC_002973.6 749080 750465 D identified by similarity to OMNI:NTL01LI0705; hypothetical protein 749080..750465 Listeria monocytogenes serotype 4b str. F2365 2797298 YP_013342.1 CDS LMOf2365_0738 NC_002973.6 750488 751654 D identified by similarity to OMNI:NTL01LI0706; hypothetical protein 750488..751654 Listeria monocytogenes serotype 4b str. F2365 2798002 YP_013343.1 CDS LMOf2365_0739 NC_002973.6 751761 752225 D identified by similarity to OMNI:NTL01LI0707; hypothetical protein 751761..752225 Listeria monocytogenes serotype 4b str. F2365 2797980 YP_013344.1 CDS LMOf2365_0740 NC_002973.6 752235 752663 D identified by similarity to OMNI:NTL01LI0708; hypothetical protein 752235..752663 Listeria monocytogenes serotype 4b str. F2365 2797988 YP_013345.1 CDS flgK NC_002973.6 752683 754203 D with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 752683..754203 Listeria monocytogenes serotype 4b str. F2365 2797337 YP_013346.1 CDS flgL NC_002973.6 754215 755090 D with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgL 754215..755090 Listeria monocytogenes serotype 4b str. F2365 2797349 YP_013347.2 CDS fliD NC_002973.6 755102 756391 D involved in flagellin assembly; flagellar capping protein 755102..756391 Listeria monocytogenes serotype 4b str. F2365 2797332 YP_013348.1 CDS LMOf2365_0744 NC_002973.6 756410 756796 D identified by similarity to SP:P39739; flagellar protein FliS 756410..756796 Listeria monocytogenes serotype 4b str. F2365 2797358 YP_013349.1 CDS LMOf2365_0745 NC_002973.6 756768 757049 D identified by similarity to OMNI:NTL01LI0713; hypothetical protein 756768..757049 Listeria monocytogenes serotype 4b str. F2365 2797354 YP_013350.1 CDS flgB NC_002973.6 757070 757471 D with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB 757070..757471 Listeria monocytogenes serotype 4b str. F2365 2797343 YP_013351.1 CDS flgC NC_002973.6 757483 757893 D with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 757483..757893 Listeria monocytogenes serotype 4b str. F2365 2797321 YP_013352.1 CDS fliE NC_002973.6 757910 758206 D forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 757910..758206 Listeria monocytogenes serotype 4b str. F2365 2797312 YP_013353.1 CDS fliF NC_002973.6 758274 759926 D the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 758274..759926 Listeria monocytogenes serotype 4b str. F2365 2797891 YP_013354.1 CDS fliG NC_002973.6 759929 761035 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 759929..761035 Listeria monocytogenes serotype 4b str. F2365 2797317 YP_013355.1 CDS fliH NC_002973.6 761022 761714 D binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 761022..761714 Listeria monocytogenes serotype 4b str. F2365 2798019 YP_013356.1 CDS fliI NC_002973.6 761711 763012 D involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 761711..763012 Listeria monocytogenes serotype 4b str. F2365 2797360 YP_013357.1 CDS LMOf2365_0753 NC_002973.6 763029 763697 D identified by match to protein family HMM PF01464; Slt family transglycosylase 763029..763697 Listeria monocytogenes serotype 4b str. F2365 2798025 YP_013358.1 CDS LMOf2365_0754 NC_002973.6 763711 764355 D identified by similarity to OMNI:NTL01LI0722; hypothetical protein 763711..764355 Listeria monocytogenes serotype 4b str. F2365 2797019 YP_013359.1 CDS LMOf2365_0755 NC_002973.6 764474 764800 D identified by match to protein family HMM PF03551; PadR family transcriptional regulator 764474..764800 Listeria monocytogenes serotype 4b str. F2365 2798029 YP_013360.1 CDS LMOf2365_0756 NC_002973.6 764800 765123 D identified by similarity to OMNI:NTL01LI0724; hypothetical protein 764800..765123 Listeria monocytogenes serotype 4b str. F2365 2797730 YP_013361.1 CDS LMOf2365_0757 NC_002973.6 765166 765813 R identified by similarity to GP:15594010; fibronectin-binding protein complement(765166..765813) Listeria monocytogenes serotype 4b str. F2365 2797652 YP_013362.1 CDS LMOf2365_0758 NC_002973.6 766084 767814 D catalyzes the formation of acetyl phosphate from pyruvate; pyruvate oxidase 766084..767814 Listeria monocytogenes serotype 4b str. F2365 2798035 YP_013363.1 CDS LMOf2365_0759 NC_002973.6 767976 769781 D identified by similarity to SP:P39216; match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein 767976..769781 Listeria monocytogenes serotype 4b str. F2365 2798277 YP_013364.1 CDS LMOf2365_0760 NC_002973.6 769794 770522 D identified by similarity to OMNI:NTL01LI0728; hypothetical protein 769794..770522 Listeria monocytogenes serotype 4b str. F2365 2797867 YP_013365.1 CDS LMOf2365_0761 NC_002973.6 770565 770777 R identified by match to protein family HMM PF00746; hypothetical protein complement(770565..770777) Listeria monocytogenes serotype 4b str. F2365 2798206 YP_013366.1 CDS glmS NC_002973.6 771225 773030 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 771225..773030 Listeria monocytogenes serotype 4b str. F2365 2798214 YP_013367.1 CDS LMOf2365_0763 NC_002973.6 773143 773883 D riboflavin kinase/FMN adenylyltransferase 773143..773883 Listeria monocytogenes serotype 4b str. F2365 2797700 YP_013368.1 CDS LMOf2365_0764 NC_002973.6 773966 774445 D identified by similarity to OMNI:NTL01LI0732; hypothetical protein 773966..774445 Listeria monocytogenes serotype 4b str. F2365 2799807 YP_013369.1 CDS LMOf2365_0765 NC_002973.6 774459 774797 D identified by similarity to OMNI:NTL01LI0733; hypothetical protein 774459..774797 Listeria monocytogenes serotype 4b str. F2365 2798273 YP_013370.1 CDS LMOf2365_0766 NC_002973.6 774942 775346 D identified by similarity to OMNI:NTL01LI0734; hypothetical protein 774942..775346 Listeria monocytogenes serotype 4b str. F2365 2799814 YP_013371.1 CDS LMOf2365_0767 NC_002973.6 775656 775766 D hypothetical protein 775656..775766 Listeria monocytogenes serotype 4b str. F2365 2799842 YP_013372.1 CDS LMOf2365_0768 NC_002973.6 776040 777944 D identified by match to protein family HMM PF00560; cell wall surface anchor family protein 776040..777944 Listeria monocytogenes serotype 4b str. F2365 2799877 YP_013373.1 CDS LMOf2365_0769 NC_002973.6 778221 778730 D identified by match to protein family HMM PF01381; DNA-binding protein 778221..778730 Listeria monocytogenes serotype 4b str. F2365 2797285 YP_013374.1 CDS LMOf2365_0770 NC_002973.6 779117 779776 R identified by similarity to OMNI:NTL01LI0738; match to protein family HMM PF00027; hypothetical protein complement(779117..779776) Listeria monocytogenes serotype 4b str. F2365 2799883 YP_013375.1 CDS LMOf2365_0771 NC_002973.6 780039 780416 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 780039..780416 Listeria monocytogenes serotype 4b str. F2365 2798016 YP_013376.1 CDS LMOf2365_0772 NC_002973.6 780400 781089 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 780400..781089 Listeria monocytogenes serotype 4b str. F2365 2799152 YP_013377.1 CDS LMOf2365_0773 NC_002973.6 781086 781790 D identified by similarity to OMNI:NTL01LI0741; ABC transporter permease 781086..781790 Listeria monocytogenes serotype 4b str. F2365 2799811 YP_013378.1 CDS LMOf2365_0774 NC_002973.6 781805 783805 D identified by match to protein family HMM PF00005; match to protein family HMM PF02687; ABC transporter ATP-binding protein/permease 781805..783805 Listeria monocytogenes serotype 4b str. F2365 2799895 YP_013379.1 CDS LMOf2365_0775 NC_002973.6 783834 784337 D identified by similarity to OMNI:NTL01LI0743; hypothetical protein 783834..784337 Listeria monocytogenes serotype 4b str. F2365 2799871 YP_013380.1 CDS LMOf2365_0776 NC_002973.6 784776 785612 D identified by match to protein family HMM PF00561; alpha/beta fold family hydrolase 784776..785612 Listeria monocytogenes serotype 4b str. F2365 2799915 YP_013381.1 CDS LMOf2365_0777 NC_002973.6 785738 786418 D identified by match to protein family HMM PF00325; Crp family transcriptional regulator 785738..786418 Listeria monocytogenes serotype 4b str. F2365 2799897 YP_013382.1 CDS LMOf2365_0778 NC_002973.6 786499 787110 D identified by similarity to GP:14290416; hypothetical protein 786499..787110 Listeria monocytogenes serotype 4b str. F2365 2799223 YP_013383.1 CDS LMOf2365_0779 NC_002973.6 787225 788046 D identified by similarity to OMNI:EF1683; match to protein family HMM PF00657; lipase/acylhydrolase 787225..788046 Listeria monocytogenes serotype 4b str. F2365 2799068 YP_013384.1 CDS LMOf2365_0780 NC_002973.6 788018 788923 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 788018..788923 Listeria monocytogenes serotype 4b str. F2365 2799188 YP_013385.1 CDS LMOf2365_0781 NC_002973.6 788916 789896 D identified by similarity to OMNI:NTL01LI0746; hypothetical protein 788916..789896 Listeria monocytogenes serotype 4b str. F2365 2799592 YP_013386.1 CDS LMOf2365_0782 NC_002973.6 790023 790913 D identified by similarity to OMNI:NTL01LI0747; match to protein family HMM PF00903; hypothetical protein 790023..790913 Listeria monocytogenes serotype 4b str. F2365 2799903 YP_013387.1 CDS LMOf2365_0783 NC_002973.6 790910 791869 D identified by similarity to OMNI:EF1669; match to protein family HMM PF00903; glyoxalase 790910..791869 Listeria monocytogenes serotype 4b str. F2365 2797974 YP_013388.1 CDS LMOf2365_0784 NC_002973.6 791876 792484 D identified by similarity to OMNI:NTL01LI0749; hypothetical protein 791876..792484 Listeria monocytogenes serotype 4b str. F2365 2799891 YP_013389.1 CDS LMOf2365_0785 NC_002973.6 792494 793114 D hypothetical protein 792494..793114 Listeria monocytogenes serotype 4b str. F2365 2797977 YP_013390.1 CDS LMOf2365_0786 NC_002973.6 793442 794698 D identified by similarity to OMNI:SP0672; hypothetical protein 793442..794698 Listeria monocytogenes serotype 4b str. F2365 2797972 YP_013391.1 CDS LMOf2365_0787 NC_002973.6 794764 795636 D identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase 794764..795636 Listeria monocytogenes serotype 4b str. F2365 2799919 YP_013392.1 CDS LMOf2365_0788 NC_002973.6 795642 796631 D identified by match to protein family HMM PF03099; match to protein family HMM TIGR00545; lipoyltransferase and lipoate-protein ligase 795642..796631 Listeria monocytogenes serotype 4b str. F2365 2797969 YP_013393.1 CDS LMOf2365_0789 NC_002973.6 796764 797516 D identified by similarity to OMNI:NTL01LI0760; hypothetical protein 796764..797516 Listeria monocytogenes serotype 4b str. F2365 2797975 YP_013394.1 CDS LMOf2365_0790 NC_002973.6 797551 798198 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 797551..798198 Listeria monocytogenes serotype 4b str. F2365 2797970 YP_013395.1 CDS LMOf2365_0791 NC_002973.6 798239 799228 R identified by match to protein family HMM PF00107; zinc-dependent alcohol dehydrogenase complement(798239..799228) Listeria monocytogenes serotype 4b str. F2365 2797971 YP_013396.1 CDS LMOf2365_0792 NC_002973.6 799407 800336 D identified by similarity to OMNI:NTL01LI0763; match to protein family HMM PF00781; match to protein family HMM TIGR00147; hypothetical protein 799407..800336 Listeria monocytogenes serotype 4b str. F2365 2797051 YP_013397.1 CDS LMOf2365_0793 NC_002973.6 800376 800708 D identified by similarity to OMNI:NTL01LI0764; hypothetical protein 800376..800708 Listeria monocytogenes serotype 4b str. F2365 2797363 YP_013398.1 CDS LMOf2365_0794 NC_002973.6 800746 801612 R identified by match to protein family HMM PF00480; ROK family protein complement(800746..801612) Listeria monocytogenes serotype 4b str. F2365 2797130 YP_013399.1 CDS LMOf2365_0795 NC_002973.6 801770 802153 D identified by similarity to GP:16413222; hypothetical protein 801770..802153 Listeria monocytogenes serotype 4b str. F2365 2797359 YP_013400.1 CDS LMOf2365_0796 NC_002973.6 802609 802959 D identified by similarity to OMNI:NTL01LI0128; hypothetical protein 802609..802959 Listeria monocytogenes serotype 4b str. F2365 2797357 YP_013401.1 CDS LMOf2365_0797 NC_002973.6 803162 803629 R identified by similarity to OMNI:NTL01LI0768; match to protein family HMM PF06173; hypothetical protein complement(803162..803629) Listeria monocytogenes serotype 4b str. F2365 2797356 YP_013402.1 CDS LMOf2365_0798 NC_002973.6 803811 804689 R hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; PTS system mannose-specific transporter subunit IID complement(803811..804689) Listeria monocytogenes serotype 4b str. F2365 2797361 YP_013403.1 CDS LMOf2365_0799 NC_002973.6 804707 805522 R identified by similarity to SP:P08187; match to protein family HMM PF03609; match to protein family HMM TIGR00822; PTS system mannose/fructose/sorbose family transporter subunit IIC complement(804707..805522) Listeria monocytogenes serotype 4b str. F2365 2797352 YP_013404.1 CDS LMOf2365_0801 NC_002973.6 806904 809720 R identified by similarity to SP:P23914; match to protein family HMM PF00158; match to protein family HMM PF00874; match to protein family HMM PF03610; sigma-54 dependent transcriptional regulator complement(806904..809720) Listeria monocytogenes serotype 4b str. F2365 2797346 YP_013405.1 CDS LMOf2365_0802 NC_002973.6 809913 810548 D identified by similarity to SP:P41407; match to protein family HMM PF02525; ACP phosphodiesterase 809913..810548 Listeria monocytogenes serotype 4b str. F2365 2797351 YP_013406.1 CDS LMOf2365_0803 NC_002973.6 810742 812118 D identified by similarity to SP:O06005; match to protein family HMM PF00324; amino acid permease 810742..812118 Listeria monocytogenes serotype 4b str. F2365 2797342 YP_013407.1 CDS LMOf2365_0804 NC_002973.6 812383 816813 D identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; match to protein family HMM TIGR01612; BadF/BadG/BcrA/BcrD family ATPase 812383..816813 Listeria monocytogenes serotype 4b str. F2365 2797338 YP_013408.1 CDS LMOf2365_0805 NC_002973.6 816991 819171 D identified by match to protein family HMM PF00560; match to protein family HMM TIGR01167; cell wall surface anchor family protein 816991..819171 Listeria monocytogenes serotype 4b str. F2365 2797335 YP_013409.1 CDS LMOf2365_0806 NC_002973.6 819288 820136 R identified by similarity to SP:Q51520; match to protein family HMM PF02567; match to protein family HMM TIGR00654; PhzF family phenazine biosynthesis protein complement(819288..820136) Listeria monocytogenes serotype 4b str. F2365 2797340 YP_013410.1 CDS LMOf2365_0807 NC_002973.6 820163 820639 R identified by match to protein family HMM PF04073; EbsC protein complement(820163..820639) Listeria monocytogenes serotype 4b str. F2365 2797330 YP_013411.1 CDS LMOf2365_0808 NC_002973.6 820763 821413 D identified by similarity to OMNI:NTL01LI0779; hypothetical protein 820763..821413 Listeria monocytogenes serotype 4b str. F2365 2797328 YP_013412.1 CDS LMOf2365_0809 NC_002973.6 821519 822409 D identified by similarity to OMNI:NTL01LI0780; match to protein family HMM PF00795; carbon-nitrogen family hydrolase 821519..822409 Listeria monocytogenes serotype 4b str. F2365 2797327 YP_013413.1 CDS LMOf2365_0810 NC_002973.6 822444 823145 R identified by match to protein family HMM PF04474; hypothetical protein complement(822444..823145) Listeria monocytogenes serotype 4b str. F2365 2797329 YP_013414.1 CDS LMOf2365_0811 NC_002973.6 823260 823901 R identified by similarity to OMNI:NTL01LI0782; hypothetical protein complement(823260..823901) Listeria monocytogenes serotype 4b str. F2365 2797323 YP_013415.1 CDS LMOf2365_0812 NC_002973.6 823985 824905 R identified by similarity to SP:P27844; match to protein family HMM PF00892; match to protein family HMM TIGR00688; RarD protein complement(823985..824905) Listeria monocytogenes serotype 4b str. F2365 2797319 YP_013416.1 CDS LMOf2365_0813 NC_002973.6 825014 825544 R identified by similarity to GP:3355681; match to protein family HMM PF04264; YceI like family protein complement(825014..825544) Listeria monocytogenes serotype 4b str. F2365 2797325 YP_013417.1 CDS LMOf2365_0814 NC_002973.6 825800 826261 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 825800..826261 Listeria monocytogenes serotype 4b str. F2365 2797315 YP_013418.1 CDS LMOf2365_0815 NC_002973.6 826313 827773 R identified by similarity to SP:P25737; match to protein family HMM PF00324; lysine-specific permease complement(826313..827773) Listeria monocytogenes serotype 4b str. F2365 2797998 YP_013419.1 CDS LMOf2365_0816 NC_002973.6 828129 828890 R identified by similarity to SP:P58724; match to protein family HMM PF00785; match to protein family HMM PF01740; match to protein family HMM TIGR00229; blue-light photoreceptor complement(828129..828890) Listeria monocytogenes serotype 4b str. F2365 2797309 YP_013420.1 CDS LMOf2365_0817 NC_002973.6 829043 829396 D identified by similarity to OMNI:NTL01LI0788; hypothetical protein 829043..829396 Listeria monocytogenes serotype 4b str. F2365 2797314 YP_013421.1 CDS LMOf2365_0818 NC_002973.6 829551 830189 D identified by similarity to OMNI:NTL01LM0796; match to protein family HMM PF04607; hypothetical protein 829551..830189 Listeria monocytogenes serotype 4b str. F2365 2797304 YP_013422.1 CDS LMOf2365_0819 NC_002973.6 830318 832366 D identified by match to protein family HMM PF00999; match to protein family HMM TIGR00831; Na+/H+ antiporter 830318..832366 Listeria monocytogenes serotype 4b str. F2365 2797306 YP_013423.1 CDS LMOf2365_0820 NC_002973.6 832406 832879 R hypothetical protein complement(832406..832879) Listeria monocytogenes serotype 4b str. F2365 2797300 YP_013424.1 CDS LMOf2365_0821 NC_002973.6 832907 833365 R hypothetical protein complement(832907..833365) Listeria monocytogenes serotype 4b str. F2365 2797299 YP_013425.1 CDS LMOf2365_0822 NC_002973.6 833575 834117 D identified by match to protein family HMM PF01381; DNA-binding protein 833575..834117 Listeria monocytogenes serotype 4b str. F2365 2797303 YP_013426.1 CDS LMOf2365_0823 NC_002973.6 834133 835227 D identified by similarity to SP:P23858; match to protein family HMM PF00005; spermidine/putrescine ABC transporter ATP-binding protein 834133..835227 Listeria monocytogenes serotype 4b str. F2365 2797291 YP_013427.1 CDS LMOf2365_0824 NC_002973.6 835227 836036 D identified by similarity to SP:P23860; match to protein family HMM PF00528; spermidine/putrescine ABC transporter permease 835227..836036 Listeria monocytogenes serotype 4b str. F2365 2797297 YP_013428.1 CDS LMOf2365_0825 NC_002973.6 836033 836839 D identified by similarity to SP:P23859; match to protein family HMM PF00528; spermidine/putrescine ABC transporter permease 836033..836839 Listeria monocytogenes serotype 4b str. F2365 2797290 YP_013429.1 CDS LMOf2365_0826 NC_002973.6 836836 837909 D identified by similarity to SP:P23861; match to protein family HMM PF01547; spermidine/putrescine ABC transporter substrate-binding protein 836836..837909 Listeria monocytogenes serotype 4b str. F2365 2797293 YP_013430.1 CDS cah NC_002973.6 838039 838740 D identified by similarity to SP:Q50940; match to protein family HMM PF00194; carbonic anhydrase 838039..838740 Listeria monocytogenes serotype 4b str. F2365 2797287 YP_013431.1 CDS LMOf2365_0828 NC_002973.6 838808 839350 D identified by match to protein family HMM PF01966; HD domain-containing protein 838808..839350 Listeria monocytogenes serotype 4b str. F2365 2797284 YP_013432.1 CDS scrK NC_002973.6 839486 840358 D identified by similarity to SP:Q07211; match to protein family HMM PF00480; fructokinase 839486..840358 Listeria monocytogenes serotype 4b str. F2365 2797281 YP_013433.1 CDS LMOf2365_0830 NC_002973.6 840443 841369 D identified by similarity to OMNI:SP0419; match to protein family HMM PF03060; enoyl-ACP reductase 840443..841369 Listeria monocytogenes serotype 4b str. F2365 2797286 YP_013434.1 CDS LMOf2365_0831 NC_002973.6 841585 841869 D identified by similarity to OMNI:NTL01LI0353; hypothetical protein 841585..841869 Listeria monocytogenes serotype 4b str. F2365 2797283 YP_013435.1 CDS LMOf2365_0832 NC_002973.6 841870 842238 D identified by similarity to OMNI:NTL01LI0354; hypothetical protein 841870..842238 Listeria monocytogenes serotype 4b str. F2365 2798009 YP_013436.1 CDS LMOf2365_0833 NC_002973.6 842235 843710 D identified by similarity to GP:16409438; hypothetical protein 842235..843710 Listeria monocytogenes serotype 4b str. F2365 2798014 YP_013437.1 CDS LMOf2365_0834 NC_002973.6 843715 844146 D hypothetical protein 843715..844146 Listeria monocytogenes serotype 4b str. F2365 2797979 YP_013438.1 CDS LMOf2365_0835 NC_002973.6 844224 844496 D hypothetical protein 844224..844496 Listeria monocytogenes serotype 4b str. F2365 2797294 YP_013439.1 CDS LMOf2365_0836 NC_002973.6 844631 845035 R identified by similarity to OMNI:NTL01LI0808; match to protein family HMM PF00903; hypothetical protein complement(844631..845035) Listeria monocytogenes serotype 4b str. F2365 2798013 YP_013440.1 CDS LMOf2365_0837 NC_002973.6 845260 847890 D identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01369; match to protein family HMM TIGR01494; cation transporter E1-E2 family ATPase 845260..847890 Listeria monocytogenes serotype 4b str. F2365 2798000 YP_013441.1 CDS LMOf2365_0838 NC_002973.6 847905 848753 D identified by similarity to OMNI:NTL01LI0810; hypothetical protein 847905..848753 Listeria monocytogenes serotype 4b str. F2365 2798004 YP_013442.1 CDS LMOf2365_0839 NC_002973.6 848863 849420 D identified by match to protein family HMM PF00583; acetyltransferase 848863..849420 Listeria monocytogenes serotype 4b str. F2365 2798006 YP_013443.1 CDS LMOf2365_0840 NC_002973.6 849437 850099 D identified by similarity to OMNI:NTL01LI0812; hypothetical protein 849437..850099 Listeria monocytogenes serotype 4b str. F2365 2797996 YP_013444.1 CDS LMOf2365_0841 NC_002973.6 850115 850504 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(850115..850504) Listeria monocytogenes serotype 4b str. F2365 2797999 YP_013445.1 CDS LMOf2365_0842 NC_002973.6 850625 851449 D identified by match to protein family HMM PF00248; aldo/keto reductase oxidoreductase 850625..851449 Listeria monocytogenes serotype 4b str. F2365 2797992 YP_013446.1 CDS LMOf2365_0843 NC_002973.6 851528 852496 D identified by similarity to OMNI:NTL01LI0815; hypothetical protein 851528..852496 Listeria monocytogenes serotype 4b str. F2365 2797990 YP_013447.1 CDS LMOf2365_0844 NC_002973.6 852537 853817 D identified by match to protein family HMM PF00368; match to protein family HMM TIGR00532; hydroxymethylglutaryl-CoA reductase, degradative 852537..853817 Listeria monocytogenes serotype 4b str. F2365 2797994 YP_013448.1 CDS LMOf2365_0845 NC_002973.6 854016 855650 D identified by match to protein family HMM PF01895; match to protein family HMM PF02690; match to protein family HMM TIGR00704; Na/Pi-cotransporter family protein 854016..855650 Listeria monocytogenes serotype 4b str. F2365 2797984 YP_013449.1 CDS LMOf2365_0846 NC_002973.6 855804 859451 D identified by similarity to SP:P03833; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR01612; pyruvate flavodoxin/ferredoxin oxidoreductase 855804..859451 Listeria monocytogenes serotype 4b str. F2365 2797981 YP_013450.1 CDS LMOf2365_0847 NC_002973.6 859701 861662 R identified by similarity to GP:19714343; phosphatase complement(859701..861662) Listeria monocytogenes serotype 4b str. F2365 2797058 YP_013451.1 CDS LMOf2365_0848 NC_002973.6 861777 862688 R identified by similarity to OMNI:NTL01LI0821; match to protein family HMM PF03547; hypothetical protein complement(861777..862688) Listeria monocytogenes serotype 4b str. F2365 2799455 YP_013452.1 CDS LMOf2365_0849 NC_002973.6 863344 863628 D identified by similarity to OMNI:NTL01LL0091; IS3 family transposase OrfA 863344..863628 Listeria monocytogenes serotype 4b str. F2365 2797718 YP_013453.1 CDS LMOf2365_0850 NC_002973.6 863820 864710 D identified by similarity to OMNI:NTL01LI0348; match to protein family HMM TIGR01716; transcriptional activator 863820..864710 Listeria monocytogenes serotype 4b str. F2365 2797003 YP_013454.1 CDS LMOf2365_0851 NC_002973.6 864785 865558 D hypothetical protein 864785..865558 Listeria monocytogenes serotype 4b str. F2365 2798279 YP_013455.1 CDS LMOf2365_0852 NC_002973.6 865551 866555 D identified by match to protein family HMM TIGR01167; cell wall surface anchor family protein 865551..866555 Listeria monocytogenes serotype 4b str. F2365 2798185 YP_013456.1 CDS LMOf2365_0853 NC_002973.6 866598 867011 R identified by match to protein family HMM PF06146; phosphate-starvation-inducible protein PsiE complement(866598..867011) Listeria monocytogenes serotype 4b str. F2365 2799765 YP_013457.1 CDS LMOf2365_0854 NC_002973.6 867184 868821 D identified by similarity to SP:P45861; match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 867184..868821 Listeria monocytogenes serotype 4b str. F2365 2798126 YP_013458.1 CDS uhpT NC_002973.6 869115 870500 D cytoplasmic membrane protein that functions as a monomer; catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate; sugar phosphate antiporter 869115..870500 Listeria monocytogenes serotype 4b str. F2365 2797901 YP_013459.1 CDS tetA NC_002973.6 870608 871819 R identified by similarity to SP:P02982; match to protein family HMM PF00083; tetracycline resistance protein complement(870608..871819) Listeria monocytogenes serotype 4b str. F2365 2797858 YP_013460.1 CDS LMOf2365_0857 NC_002973.6 871949 872419 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(871949..872419) Listeria monocytogenes serotype 4b str. F2365 2797875 YP_013461.1 CDS LMOf2365_0858 NC_002973.6 872621 875263 D identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; cation transport ATPase 872621..875263 Listeria monocytogenes serotype 4b str. F2365 2797643 YP_013462.1 CDS LMOf2365_0859 NC_002973.6 875715 881798 D identified by match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein 875715..881798 Listeria monocytogenes serotype 4b str. F2365 2797661 YP_013463.1 CDS LMOf2365_0860 NC_002973.6 881936 882193 R identified by similarity to SP:Q03440; cytochrome c oxidase subunit IV complement(881936..882193) Listeria monocytogenes serotype 4b str. F2365 2797783 YP_013464.1 CDS LMOf2365_0861 NC_002973.6 882272 882649 D identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; endoribonuclease L-PSP 882272..882649 Listeria monocytogenes serotype 4b str. F2365 2797707 YP_013465.1 CDS LMOf2365_0862 NC_002973.6 882906 884009 D identified by match to protein family HMM PF01717; vitamin-B12 independent methionine synthase 882906..884009 Listeria monocytogenes serotype 4b str. F2365 2797789 YP_013466.1 CDS LMOf2365_0863 NC_002973.6 884114 885214 D identified by similarity to SP:P14951; match to protein family HMM PF01541; match to protein family HMM PF02151; excinuclease ABC subunit C 884114..885214 Listeria monocytogenes serotype 4b str. F2365 2798032 YP_013467.1 CDS LMOf2365_0864 NC_002973.6 885384 886826 D identified by similarity to SP:P10344; similarity to SP:P10345; match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726; glutamine ABC transporter permease/substrate-binding protein 885384..886826 Listeria monocytogenes serotype 4b str. F2365 2797807 YP_013468.1 CDS LMOf2365_0865 NC_002973.6 886819 887547 D identified by similarity to SP:P27675; match to protein family HMM PF00005; glutamine ABC transporter ATP-binding protein 886819..887547 Listeria monocytogenes serotype 4b str. F2365 2797845 YP_013469.1 CDS LMOf2365_0866 NC_002973.6 887596 889443 R catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase complement(887596..889443) Listeria monocytogenes serotype 4b str. F2365 2797736 YP_013470.1 CDS LMOf2365_0867 NC_002973.6 889977 890156 D identified by similarity to OMNI:NTL01LM0843; hypothetical protein 889977..890156 Listeria monocytogenes serotype 4b str. F2365 2798034 YP_013471.1 CDS LMOf2365_0868 NC_002973.6 890376 891134 D identified by similarity to OMNI:NTL01LI0839; hypothetical protein 890376..891134 Listeria monocytogenes serotype 4b str. F2365 2798028 YP_013472.1 CDS LMOf2365_0869 NC_002973.6 891214 891768 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 891214..891768 Listeria monocytogenes serotype 4b str. F2365 2798026 YP_013473.1 CDS sugE-1 NC_002973.6 891785 892126 D identified by similarity to SP:P30743; match to protein family HMM PF00893; SugE protein 891785..892126 Listeria monocytogenes serotype 4b str. F2365 2798030 YP_013474.1 CDS sugE-2 NC_002973.6 892129 892449 D identified by similarity to SP:P30743; match to protein family HMM PF00893; SugE protein 892129..892449 Listeria monocytogenes serotype 4b str. F2365 2798022 YP_013475.1 CDS ddl NC_002973.6 892599 893711 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 892599..893711 Listeria monocytogenes serotype 4b str. F2365 2798024 YP_013476.1 CDS murF NC_002973.6 893775 895148 D identified by similarity to SP:P96613; match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 893775..895148 Listeria monocytogenes serotype 4b str. F2365 2798017 YP_013477.1 CDS LMOf2365_0874 NC_002973.6 895215 895928 D identified by match to protein family HMM PF00561; alpha/beta fold family hydrolase 895215..895928 Listeria monocytogenes serotype 4b str. F2365 2798021 YP_013478.1 CDS LMOf2365_0875 NC_002973.6 895940 896965 R identified by similarity to SP:P06964; match to protein family HMM PF00532; DNA-binding transcriptional regulator complement(895940..896965) Listeria monocytogenes serotype 4b str. F2365 2799782 YP_013479.1 CDS LMOf2365_0876 NC_002973.6 897209 898528 D identified by match to protein family HMM PF01547; sugar ABC transporter substrate-binding protein 897209..898528 Listeria monocytogenes serotype 4b str. F2365 2798018 YP_013480.1 CDS LMOf2365_0877 NC_002973.6 898525 899403 D identified by match to protein family HMM PF00528; sugar ABC transporter permease 898525..899403 Listeria monocytogenes serotype 4b str. F2365 2797059 YP_013481.1 CDS LMOf2365_0878 NC_002973.6 899390 900223 D identified by match to protein family HMM PF00528; sugar ABC transporter permease 899390..900223 Listeria monocytogenes serotype 4b str. F2365 2797305 YP_013482.1 CDS treC-1 NC_002973.6 900239 901771 D identified by similarity to SP:P28904; match to protein family HMM PF00128; trehalose-6-phosphate hydrolase 900239..901771 Listeria monocytogenes serotype 4b str. F2365 2797413 YP_013483.1 CDS LMOf2365_0880 NC_002973.6 901773 902687 D identified by similarity to OMNI:NTL01LI0851; hypothetical protein 901773..902687 Listeria monocytogenes serotype 4b str. F2365 2798294 YP_013484.1 CDS LMOf2365_0881 NC_002973.6 902709 903776 D identified by similarity to OMNI:NTL01LI0852; hypothetical protein 902709..903776 Listeria monocytogenes serotype 4b str. F2365 2799381 YP_013485.1 CDS LMOf2365_0882 NC_002973.6 903773 905446 D identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase 903773..905446 Listeria monocytogenes serotype 4b str. F2365 2799619 YP_013486.1 CDS LMOf2365_0883 NC_002973.6 905422 905529 D hypothetical protein 905422..905529 Listeria monocytogenes serotype 4b str. F2365 2798960 YP_013487.1 CDS LMOf2365_0884 NC_002973.6 905902 907461 D identified by similarity to SP:P23304; match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent RNA helicase DeaD 905902..907461 Listeria monocytogenes serotype 4b str. F2365 2798999 YP_013488.1 CDS LMOf2365_0885 NC_002973.6 907581 907757 D hypothetical protein 907581..907757 Listeria monocytogenes serotype 4b str. F2365 2798091 YP_013489.1 CDS LMOf2365_0886 NC_002973.6 907905 908393 D identified by similarity to OMNI:NTL01LI0855; match to protein family HMM PF06177; hypothetical protein 907905..908393 Listeria monocytogenes serotype 4b str. F2365 2799424 YP_013490.1 CDS LMOf2365_0887 NC_002973.6 908425 908982 R identified by similarity to OMNI:NTL01LI0856; hypothetical protein complement(908425..908982) Listeria monocytogenes serotype 4b str. F2365 2799147 YP_013491.1 CDS LMOf2365_0888 NC_002973.6 909084 910082 D identified by similarity to OMNI:NTL01LI0857; match to protein family HMM PF04909; hypothetical protein 909084..910082 Listeria monocytogenes serotype 4b str. F2365 2798175 YP_013492.1 CDS LMOf2365_0889 NC_002973.6 910099 910410 D identified by similarity to OMNI:NTL01LI0858; hypothetical protein 910099..910410 Listeria monocytogenes serotype 4b str. F2365 2798184 YP_013493.1 CDS LMOf2365_0890 NC_002973.6 910443 910796 R identified by similarity to OMNI:NTL01LI0864; match to protein family HMM PF01638; hypothetical protein complement(910443..910796) Listeria monocytogenes serotype 4b str. F2365 2798228 YP_013494.1 CDS LMOf2365_0891 NC_002973.6 910930 912090 D identified by match to protein family HMM PF00083; major facilitator family transporter 910930..912090 Listeria monocytogenes serotype 4b str. F2365 2798208 YP_013495.1 CDS LMOf2365_0892 NC_002973.6 912298 914316 D identified by match to protein family HMM PF00359; match to protein family HMM PF00874; PTS system IIA component domain-containing protein 912298..914316 Listeria monocytogenes serotype 4b str. F2365 2799694 YP_013496.1 CDS LMOf2365_0893 NC_002973.6 914331 914660 D identified by similarity to SP:P23532; match to protein family HMM PF02255; PTS system beta-glucoside-specific transporter subunit IIA 914331..914660 Listeria monocytogenes serotype 4b str. F2365 2799685 YP_013497.1 CDS LMOf2365_0894 NC_002973.6 914661 914996 D identified by similarity to SP:P46318; match to protein family HMM PF02302; PTS system beta-glucoside-specific transporter subunit IIB 914661..914996 Listeria monocytogenes serotype 4b str. F2365 2797920 YP_013498.1 CDS LMOf2365_0895 NC_002973.6 915016 916341 D identified by similarity to SP:P46317; match to protein family HMM PF02378; match to protein family HMM TIGR00410; PTS system beta-glucoside-specific transporter subunit IIC 915016..916341 Listeria monocytogenes serotype 4b str. F2365 2797582 YP_013499.1 CDS LMOf2365_0896 NC_002973.6 916362 917090 D identified by similarity to SP:O35000; match to protein family HMM PF01182; glucosamine-6-phosphate isomerase 916362..917090 Listeria monocytogenes serotype 4b str. F2365 2797265 YP_013500.1 CDS LMOf2365_0897 NC_002973.6 917192 918043 D identified by match to protein family HMM PF00248; aldo/keto reductase oxidoreductase 917192..918043 Listeria monocytogenes serotype 4b str. F2365 2799627 YP_013501.1 CDS LMOf2365_0898 NC_002973.6 918061 918828 D identified by similarity to OMNI:NTL01BH3349; hypothetical protein 918061..918828 Listeria monocytogenes serotype 4b str. F2365 2799606 YP_013502.1 CDS LMOf2365_0899 NC_002973.6 918946 920334 D identified by match to protein family HMM PF01476; match to protein family HMM PF05737; lysM domain-containing protein 918946..920334 Listeria monocytogenes serotype 4b str. F2365 2799689 YP_013503.1 CDS LMOf2365_0900 NC_002973.6 920380 920856 R identified by similarity to OMNI:NTL01LI0874; hypothetical protein complement(920380..920856) Listeria monocytogenes serotype 4b str. F2365 2799583 YP_013504.1 CDS LMOf2365_0901 NC_002973.6 920989 921471 D identified by similarity to OMNI:NTL01LI0875; match to protein family HMM PF03703; hypothetical protein 920989..921471 Listeria monocytogenes serotype 4b str. F2365 2798151 YP_013505.1 CDS LMOf2365_0902 NC_002973.6 921464 922939 D identified by match to protein family HMM PF03703; hypothetical protein 921464..922939 Listeria monocytogenes serotype 4b str. F2365 2799543 YP_013506.1 CDS hemG NC_002973.6 923089 924468 D catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase 923089..924468 Listeria monocytogenes serotype 4b str. F2365 2798929 YP_013507.1 CDS acpS NC_002973.6 924470 924826 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 924470..924826 Listeria monocytogenes serotype 4b str. F2365 2799570 YP_013508.1 CDS alr NC_002973.6 924845 925951 D identified by match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492; alanine racemase 924845..925951 Listeria monocytogenes serotype 4b str. F2365 2798069 YP_013509.1 CDS LMOf2365_0906 NC_002973.6 926157 926435 D identified by similarity to OMNI:NTL01LI0880; hypothetical protein 926157..926435 Listeria monocytogenes serotype 4b str. F2365 2799416 YP_013510.1 CDS rsbR NC_002973.6 927036 927872 D identified by similarity to SP:P42409; match to protein family HMM PF01740; modulator protein RsbR 927036..927872 Listeria monocytogenes serotype 4b str. F2365 2799577 YP_013511.1 CDS rsbS NC_002973.6 927878 928234 D identified by similarity to SP:P42410; match to protein family HMM PF01740; anti-sigma factor B antagonist 927878..928234 Listeria monocytogenes serotype 4b str. F2365 2799378 YP_013512.1 CDS rsbT NC_002973.6 928231 928647 D identified by similarity to SP:P42411; match to protein family HMM PF02518; anti-sigma B factor RsbT 928231..928647 Listeria monocytogenes serotype 4b str. F2365 2798972 YP_013513.1 CDS LMOf2365_0911 NC_002973.6 928664 929668 D identified by similarity to SP:P40399; sigma factor B regulator protein 928664..929668 Listeria monocytogenes serotype 4b str. F2365 2797634 YP_013514.1 CDS LMOf2365_0912 NC_002973.6 929818 930162 D identified by similarity to SP:P17903; match to protein family HMM PF01740; match to protein family HMM TIGR00377; anti-sigma factor antagonist 929818..930162 Listeria monocytogenes serotype 4b str. F2365 2798989 YP_013515.1 CDS LMOf2365_0913 NC_002973.6 930146 930619 D binds to sigma-B preventing the formation of an RNA polymerase holoenzyme; serine-protein kinase RsbW 930146..930619 Listeria monocytogenes serotype 4b str. F2365 2797737 YP_013516.1 CDS sigB NC_002973.6 930597 931376 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; RNA polymerase sigma factor SigB 930597..931376 Listeria monocytogenes serotype 4b str. F2365 2799314 YP_013517.1 CDS LMOf2365_0915 NC_002973.6 931377 931976 D identified by similarity to SP:P17906; sigma-B negative effector 931377..931976 Listeria monocytogenes serotype 4b str. F2365 2798188 YP_013518.1 CDS LMOf2365_0916 NC_002973.6 932181 933812 D identified by match to protein family HMM PF00916; match to protein family HMM PF01740; match to protein family HMM TIGR00815; sulfate permease 932181..933812 Listeria monocytogenes serotype 4b str. F2365 2798971 YP_013519.1 CDS LMOf2365_0917 NC_002973.6 933883 936060 D identified by match to protein family HMM PF00575; S1 RNA-binding domain-containing protein 933883..936060 Listeria monocytogenes serotype 4b str. F2365 2798896 YP_013520.1 CDS LMOf2365_0918 NC_002973.6 936060 936527 D identified by match to protein family HMM PF03926; hypothetical protein 936060..936527 Listeria monocytogenes serotype 4b str. F2365 2797367 YP_013521.1 CDS LMOf2365_0919 NC_002973.6 936896 937336 D identified by similarity to SP:P30176; hypothetical protein 936896..937336 Listeria monocytogenes serotype 4b str. F2365 2799001 YP_013522.1 CDS LMOf2365_0920 NC_002973.6 937352 937837 D hypothetical protein 937352..937837 Listeria monocytogenes serotype 4b str. F2365 2799406 YP_013523.1 CDS LMOf2365_0921 NC_002973.6 937892 938284 D identified by similarity to OMNI:NTL01LI0893; hypothetical protein 937892..938284 Listeria monocytogenes serotype 4b str. F2365 2798954 YP_013524.1 CDS celB NC_002973.6 938430 939716 D identified by match to protein family HMM PF02378; match to protein family HMM TIGR00359; match to protein family HMM TIGR00410; PTS system cellobiose-specific transporter subunit IIC 938430..939716 Listeria monocytogenes serotype 4b str. F2365 2797386 YP_013525.1 CDS LMOf2365_0923 NC_002973.6 939797 940510 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 939797..940510 Listeria monocytogenes serotype 4b str. F2365 2798982 YP_013526.1 CDS LMOf2365_0924 NC_002973.6 941006 941386 D identified by match to protein family HMM PF02566; OsmC/Ohr family protein 941006..941386 Listeria monocytogenes serotype 4b str. F2365 2799872 YP_013527.1 CDS LMOf2365_0925 NC_002973.6 941355 941519 D hypothetical protein 941355..941519 Listeria monocytogenes serotype 4b str. F2365 2798491 YP_013528.1 CDS LMOf2365_0926 NC_002973.6 941501 942175 D identified by similarity to OMNI:EF1738; hypothetical protein 941501..942175 Listeria monocytogenes serotype 4b str. F2365 2799150 YP_013529.1 CDS LMOf2365_0927 NC_002973.6 942306 942803 D identified by similarity to OMNI:NTL01LI0898; hypothetical protein 942306..942803 Listeria monocytogenes serotype 4b str. F2365 2799509 YP_013530.1 CDS gor NC_002973.6 942839 944188 D catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 942839..944188 Listeria monocytogenes serotype 4b str. F2365 2799205 YP_013531.1 CDS LMOf2365_0929 NC_002973.6 944217 944891 D identified by match to protein family HMM PF00300; phosphoglycerate mutase 944217..944891 Listeria monocytogenes serotype 4b str. F2365 2798551 YP_013532.1 CDS LMOf2365_0930 NC_002973.6 944934 946070 R identified by match to protein family HMM PF01594; hypothetical protein complement(944934..946070) Listeria monocytogenes serotype 4b str. F2365 2799153 YP_013533.1 CDS LMOf2365_0931 NC_002973.6 946211 946603 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 946211..946603 Listeria monocytogenes serotype 4b str. F2365 2799786 YP_013534.1 CDS LMOf2365_0932 NC_002973.6 946606 947709 D hypothetical protein 946606..947709 Listeria monocytogenes serotype 4b str. F2365 2797778 YP_013535.1 CDS LMOf2365_0933 NC_002973.6 947792 948295 D identified by similarity to OMNI:NTL01BH2122; hypothetical protein 947792..948295 Listeria monocytogenes serotype 4b str. F2365 2798194 YP_013536.1 CDS LMOf2365_0934 NC_002973.6 948409 949221 D identified by similarity to SP:P21501; match to protein family HMM PF01226; match to protein family HMM TIGR00790; formate/nitrite transporter family protein 948409..949221 Listeria monocytogenes serotype 4b str. F2365 2799745 YP_013537.1 CDS gabD NC_002973.6 949446 950912 D identified by similarity to SP:P25526; match to protein family HMM PF00171; succinate-semialdehyde dehydrogenase 949446..950912 Listeria monocytogenes serotype 4b str. F2365 2799735 YP_013538.1 CDS LMOf2365_0936 NC_002973.6 951056 951361 D identified by similarity to SP:Q45399; match to protein family HMM PF02302; PTS system cellobiose-specific transporter subunit IIB 951056..951361 Listeria monocytogenes serotype 4b str. F2365 2797835 YP_013539.1 CDS LMOf2365_0937 NC_002973.6 951366 952634 D identified by similarity to SP:P46317; match to protein family HMM PF02378; PTS system transporter subunit IIC 951366..952634 Listeria monocytogenes serotype 4b str. F2365 2797762 YP_013540.1 CDS LMOf2365_0938 NC_002973.6 952649 952999 D identified by similarity to SP:P26426; match to protein family HMM PF02255; PTS system beta-glucoside-specific transporter subunit IIA 952649..952999 Listeria monocytogenes serotype 4b str. F2365 2799668 YP_013541.1 CDS bglH-2 NC_002973.6 953011 954462 D identified by similarity to SP:P40740; match to protein family HMM PF00232; beta-glucosidase 953011..954462 Listeria monocytogenes serotype 4b str. F2365 2797087 YP_013542.1 CDS LMOf2365_0940 NC_002973.6 954535 956433 D identified by match to protein family HMM PF00359; match to protein family HMM PF00874; PRD/PTS system IIA 2 domain-containing protein 954535..956433 Listeria monocytogenes serotype 4b str. F2365 2799387 YP_013543.1 CDS LMOf2365_0941 NC_002973.6 956725 958296 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 956725..958296 Listeria monocytogenes serotype 4b str. F2365 2799420 YP_013544.1 CDS LMOf2365_0942 NC_002973.6 958418 959458 D identified by match to protein family HMM PF03773; ABC transporter permease 958418..959458 Listeria monocytogenes serotype 4b str. F2365 2797390 YP_013545.1 CDS LMOf2365_0943 NC_002973.6 959477 960316 D identified by similarity to OMNI:NTL01LI0914; hypothetical protein 959477..960316 Listeria monocytogenes serotype 4b str. F2365 2799569 YP_013546.1 CDS coaA NC_002973.6 960405 961325 D catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 960405..961325 Listeria monocytogenes serotype 4b str. F2365 2798077 YP_013547.1 CDS LMOf2365_0945 NC_002973.6 961441 962163 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 961441..962163 Listeria monocytogenes serotype 4b str. F2365 2798105 YP_013548.1 CDS LMOf2365_0946 NC_002973.6 962163 963278 D ABC transporter permease 962163..963278 Listeria monocytogenes serotype 4b str. F2365 2798438 YP_013549.1 CDS LMOf2365_0947 NC_002973.6 963331 963957 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 963331..963957 Listeria monocytogenes serotype 4b str. F2365 2798623 YP_013550.1 CDS LMOf2365_0948 NC_002973.6 963989 965950 R identified by match to protein family HMM PF00884; sulfatase complement(963989..965950) Listeria monocytogenes serotype 4b str. F2365 2798571 YP_013551.1 CDS LMOf2365_0949 NC_002973.6 966209 966832 D responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 966209..966832 Listeria monocytogenes serotype 4b str. F2365 2798395 YP_013552.1 CDS LMOf2365_0950 NC_002973.6 966941 967609 D identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase 966941..967609 Listeria monocytogenes serotype 4b str. F2365 2798526 YP_013553.1 CDS LMOf2365_0951 NC_002973.6 967722 968453 D identified by similarity to OMNI:NTL01BS01024; match to protein family HMM PF00753; hypothetical protein 967722..968453 Listeria monocytogenes serotype 4b str. F2365 2798540 YP_013554.1 CDS LMOf2365_0952 NC_002973.6 968477 969472 D identified by similarity to SP:P32099; match to protein family HMM PF03099; match to protein family HMM TIGR00545; lipoyltransferase and lipoate-protein ligase 968477..969472 Listeria monocytogenes serotype 4b str. F2365 2798605 YP_013555.1 CDS LMOf2365_0953 NC_002973.6 969512 970117 R identified by similarity to OMNI:SA0967; hypothetical protein complement(969512..970117) Listeria monocytogenes serotype 4b str. F2365 2798529 YP_013556.1 CDS LMOf2365_0954 NC_002973.6 970244 972301 R identified by match to protein family HMM PF02366; dolichyl-phosphate-mannose-protein mannosyltransferase complement(970244..972301) Listeria monocytogenes serotype 4b str. F2365 2798461 YP_013557.1 CDS LMOf2365_0956 NC_002973.6 973818 974327 D identified by match to protein family HMM PF00588; match to protein family HMM TIGR00185; RNA methyltransferase 973818..974327 Listeria monocytogenes serotype 4b str. F2365 2798410 YP_013558.1 CDS LMOf2365_0957 NC_002973.6 974340 975080 D identified by match to protein family HMM PF00881; nitroreductase 974340..975080 Listeria monocytogenes serotype 4b str. F2365 2798195 YP_013559.1 CDS LMOf2365_0958 NC_002973.6 975130 975291 R hypothetical protein complement(975130..975291) Listeria monocytogenes serotype 4b str. F2365 2799687 YP_013560.1 CDS LMOf2365_0959 NC_002973.6 975379 975837 R identified by match to protein family HMM PF01451; low molecular weight phosphotyrosine protein phosphatase complement(975379..975837) Listeria monocytogenes serotype 4b str. F2365 2799804 YP_013561.1 CDS LMOf2365_0960 NC_002973.6 975850 976596 R identified by similarity to OMNI:NTL01LI0929; hypothetical protein complement(975850..976596) Listeria monocytogenes serotype 4b str. F2365 2798645 YP_013562.1 CDS LMOf2365_0961 NC_002973.6 976692 977660 R identified by similarity to OMNI:NTL01LI0930; hypothetical protein complement(976692..977660) Listeria monocytogenes serotype 4b str. F2365 2798584 YP_013563.1 CDS LMOf2365_0962 NC_002973.6 977672 979477 R identified by match to protein family HMM PF02518; HSP90 family protein complement(977672..979477) Listeria monocytogenes serotype 4b str. F2365 2799404 YP_013564.1 CDS LMOf2365_0963 NC_002973.6 979680 980150 D identified by similarity to GP:8272443; match to protein family HMM PF00210; peroxide resistance protein Dpr 979680..980150 Listeria monocytogenes serotype 4b str. F2365 2798911 YP_013565.1 CDS LMOf2365_0964 NC_002973.6 980384 980686 D identified by similarity to OMNI:NTL01LI0933; hypothetical protein 980384..980686 Listeria monocytogenes serotype 4b str. F2365 2798990 YP_013566.1 CDS LMOf2365_0965 NC_002973.6 980799 981929 D identified by similarity to OMNI:NTL01LI0934; match to protein family HMM PF00633; match to protein family HMM PF00753; lipoprotein 980799..981929 Listeria monocytogenes serotype 4b str. F2365 2799615 YP_013567.1 CDS LMOf2365_0966 NC_002973.6 981939 982166 D identified by similarity to GP:16413404; hypothetical protein 981939..982166 Listeria monocytogenes serotype 4b str. F2365 2798050 YP_013568.1 CDS LMOf2365_0967 NC_002973.6 982365 983582 R transporter complement(982365..983582) Listeria monocytogenes serotype 4b str. F2365 2799409 YP_013569.1 CDS LMOf2365_0968 NC_002973.6 983579 984268 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(983579..984268) Listeria monocytogenes serotype 4b str. F2365 2797423 YP_013570.1 CDS LMOf2365_0969 NC_002973.6 984390 985436 D identified by match to protein family HMM PF01594; hypothetical protein 984390..985436 Listeria monocytogenes serotype 4b str. F2365 2799436 YP_013571.1 CDS LMOf2365_0970 NC_002973.6 985446 986345 R identified by similarity to OMNI:NTL01LI0939; match to protein family HMM PF06028; hypothetical protein complement(985446..986345) Listeria monocytogenes serotype 4b str. F2365 2799415 YP_013572.1 CDS LMOf2365_0971 NC_002973.6 986366 987187 R identified by similarity to OMNI:NTL01LI0940; match to protein family HMM PF06028; hypothetical protein complement(986366..987187) Listeria monocytogenes serotype 4b str. F2365 2799578 YP_013573.1 CDS LMOf2365_0972 NC_002973.6 987345 987803 D identified by similarity to OMNI:NTL01LI0941; hypothetical protein 987345..987803 Listeria monocytogenes serotype 4b str. F2365 2797910 YP_013574.1 CDS LMOf2365_0973 NC_002973.6 987897 988130 D lipoprotein 987897..988130 Listeria monocytogenes serotype 4b str. F2365 2799281 YP_013575.1 CDS LMOf2365_0974 NC_002973.6 988358 988672 D identified by similarity to OMNI:NTL01LI0943; hypothetical protein 988358..988672 Listeria monocytogenes serotype 4b str. F2365 2799306 YP_013576.1 CDS LMOf2365_0975 NC_002973.6 988688 989533 D identified by similarity to OMNI:NTL01LI0944; hypothetical protein 988688..989533 Listeria monocytogenes serotype 4b str. F2365 2799610 YP_013577.1 CDS nagA-1 NC_002973.6 989724 990857 D identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221; N-acetylglucosamine-6-phosphate deacetylase 989724..990857 Listeria monocytogenes serotype 4b str. F2365 2797252 YP_013578.1 CDS nagB NC_002973.6 990873 991577 D identified by match to protein family HMM PF01182; match to protein family HMM TIGR00502; glucosamine-6-phosphate isomerase 990873..991577 Listeria monocytogenes serotype 4b str. F2365 2798582 YP_013579.1 CDS LMOf2365_0978 NC_002973.6 991593 992315 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 991593..992315 Listeria monocytogenes serotype 4b str. F2365 2798583 YP_013580.1 CDS LMOf2365_0979 NC_002973.6 992435 993490 D identified by similarity to OMNI:NTL01SA0723; match to protein family HMM PF00953; llm protein 992435..993490 Listeria monocytogenes serotype 4b str. F2365 2798546 YP_013581.1 CDS LMOf2365_0980 NC_002973.6 993603 994511 D identified by match to protein family HMM PF01136; peptidase 993603..994511 Listeria monocytogenes serotype 4b str. F2365 2798291 YP_013582.1 CDS LMOf2365_0981 NC_002973.6 994526 995752 D identified by match to protein family HMM PF01136; U32 family peptidase 994526..995752 Listeria monocytogenes serotype 4b str. F2365 2797256 YP_013583.1 CDS LMOf2365_0982 NC_002973.6 995836 996393 D identified by similarity to GP:1519287; match to protein family HMM PF04011; LemA protein 995836..996393 Listeria monocytogenes serotype 4b str. F2365 2798453 YP_013584.1 CDS LMOf2365_0983 NC_002973.6 996416 997330 D metalloprotease; heat shock protein HtpX 996416..997330 Listeria monocytogenes serotype 4b str. F2365 2798261 YP_013585.1 CDS LMOf2365_0984 NC_002973.6 997368 998186 R identified by similarity to OMNI:NTL01LI0953; match to protein family HMM PF01323; hypothetical protein complement(997368..998186) Listeria monocytogenes serotype 4b str. F2365 2798270 YP_013586.1 CDS LMOf2365_0985 NC_002973.6 998424 999008 R identified by similarity to OMNI:NTL01LI0954; match to protein family HMM PF01928; hypothetical protein complement(998424..999008) Listeria monocytogenes serotype 4b str. F2365 2797187 YP_013587.1 CDS LMOf2365_0986 NC_002973.6 999025 999492 R identified by match to protein family HMM PF00515; hypothetical protein complement(999025..999492) Listeria monocytogenes serotype 4b str. F2365 2798400 YP_013588.1 CDS LMOf2365_0987 NC_002973.6 999651 1000319 D identified by similarity to OMNI:NTL01LI0956; match to protein family HMM PF04607; hypothetical protein 999651..1000319 Listeria monocytogenes serotype 4b str. F2365 2797935 YP_013589.1 CDS ppnK NC_002973.6 1000351 1001145 D catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1000351..1001145 Listeria monocytogenes serotype 4b str. F2365 2798403 YP_013590.1 CDS LMOf2365_0989 NC_002973.6 1001164 1002054 D identified by match to protein family HMM PF00849; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase D 1001164..1002054 Listeria monocytogenes serotype 4b str. F2365 2797493 YP_013591.1 CDS fabI NC_002973.6 1002132 1002920 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 1002132..1002920 Listeria monocytogenes serotype 4b str. F2365 2799699 YP_013592.1 CDS dltD NC_002973.6 1002948 1004222 R identified by similarity to SP:P39578; match to protein family HMM PF04914; match to protein family HMM PF04915; match to protein family HMM PF04918; DltD protein complement(1002948..1004222) Listeria monocytogenes serotype 4b str. F2365 2799652 YP_013593.1 CDS dltC NC_002973.6 1004222 1004458 R D-alanyl carrier protein subunit; involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid; D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 2 complement(1004222..1004458) Listeria monocytogenes serotype 4b str. F2365 2797133 YP_013594.1 CDS dltB NC_002973.6 1004484 1005668 R identified by similarity to SP:P39580; match to protein family HMM PF03062; DltB protein complement(1004484..1005668) Listeria monocytogenes serotype 4b str. F2365 2799653 YP_013595.1 CDS dltA NC_002973.6 1005665 1007197 R transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 1 complement(1005665..1007197) Listeria monocytogenes serotype 4b str. F2365 2799331 YP_013596.1 CDS LMOf2365_0995 NC_002973.6 1007234 1007380 R hypothetical protein complement(1007234..1007380) Listeria monocytogenes serotype 4b str. F2365 2799651 YP_013597.1 CDS rpiA NC_002973.6 1007588 1008262 D Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1007588..1008262 Listeria monocytogenes serotype 4b str. F2365 2799095 YP_013598.1 CDS LMOf2365_0997 NC_002973.6 1008307 1008741 R identified by match to protein family HMM PF00583; acetyltransferase complement(1008307..1008741) Listeria monocytogenes serotype 4b str. F2365 2796997 YP_013599.1 CDS LMOf2365_0998 NC_002973.6 1008759 1009508 R identified by similarity to OMNI:NTL01LI0966; match to protein family HMM PF00756; hypothetical protein complement(1008759..1009508) Listeria monocytogenes serotype 4b str. F2365 2799111 YP_013600.1 CDS ilvE NC_002973.6 1009727 1010746 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 1009727..1010746 Listeria monocytogenes serotype 4b str. F2365 2799268 YP_013601.1 CDS LMOf2365_1000 NC_002973.6 1010944 1011708 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1010944..1011708 Listeria monocytogenes serotype 4b str. F2365 2799254 YP_013602.1 CDS LMOf2365_1001 NC_002973.6 1011705 1012457 D identified by similarity to SP:P32011; ABC transporter permease 1011705..1012457 Listeria monocytogenes serotype 4b str. F2365 2799293 YP_013603.1 CDS LMOf2365_1002 NC_002973.6 1012491 1013966 R identified by match to protein family HMM PF00083; match to protein family HMM TIGR00711; EmrB/QacA family drug resistance transporter complement(1012491..1013966) Listeria monocytogenes serotype 4b str. F2365 2799063 YP_013604.1 CDS LMOf2365_1003 NC_002973.6 1014107 1015159 D identified by similarity to GP:16413440; match to protein family HMM PF05343; hypothetical protein 1014107..1015159 Listeria monocytogenes serotype 4b str. F2365 2798660 YP_013605.1 CDS bsaA NC_002973.6 1015172 1015651 D identified by similarity to SP:O32770; match to protein family HMM PF00255; glutathione peroxidase 1015172..1015651 Listeria monocytogenes serotype 4b str. F2365 2799035 YP_013606.1 CDS LMOf2365_1005 NC_002973.6 1015784 1016239 D identified by similarity to OMNI:SP1915; match to protein family HMM PF04397; hypothetical protein 1015784..1016239 Listeria monocytogenes serotype 4b str. F2365 2799214 YP_013607.1 CDS LMOf2365_1006 NC_002973.6 1016236 1016664 D identified by similarity to OMNI:NTL01LI0974; hypothetical protein 1016236..1016664 Listeria monocytogenes serotype 4b str. F2365 2799061 YP_013608.1 CDS LMOf2365_1007 NC_002973.6 1016661 1017572 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1016661..1017572 Listeria monocytogenes serotype 4b str. F2365 2799232 YP_013609.1 CDS prfC NC_002973.6 1018500 1020068 D stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 1018500..1020068 Listeria monocytogenes serotype 4b str. F2365 2799138 YP_013610.1 CDS LMOf2365_1010 NC_002973.6 1020194 1020601 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1020194..1020601 Listeria monocytogenes serotype 4b str. F2365 2799103 YP_013611.1 CDS LMOf2365_1011 NC_002973.6 1020654 1022015 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 1020654..1022015 Listeria monocytogenes serotype 4b str. F2365 2799236 YP_013612.1 CDS LMOf2365_1012 NC_002973.6 1022297 1023064 D TerC family membrane protein 1022297..1023064 Listeria monocytogenes serotype 4b str. F2365 2799196 YP_013613.1 CDS LMOf2365_1013 NC_002973.6 1023167 1023934 D identified by match to protein family HMM PF03741; TerC family membrane protein 1023167..1023934 Listeria monocytogenes serotype 4b str. F2365 2799193 YP_013614.1 CDS LMOf2365_1014 NC_002973.6 1023975 1025312 D identified by match to protein family HMM PF02386; cation transport protein 1023975..1025312 Listeria monocytogenes serotype 4b str. F2365 2799140 YP_013615.1 CDS LMOf2365_1015 NC_002973.6 1025392 1025760 R identified by similarity to OMNI:NTL01LI0983; hypothetical protein complement(1025392..1025760) Listeria monocytogenes serotype 4b str. F2365 2799162 YP_013616.1 CDS LMOf2365_1016 NC_002973.6 1025790 1026821 R identified by similarity to OMNI:NTL01LI0984; match to protein family HMM PF01757; hypothetical protein complement(1025790..1026821) Listeria monocytogenes serotype 4b str. F2365 2799334 YP_013617.1 CDS ogt-2 NC_002973.6 1027006 1027485 D identified by similarity to SP:P11742; match to protein family HMM PF01035; match to protein family HMM TIGR00589; methylated-DNA--protein-cysteine methyltransferase 1027006..1027485 Listeria monocytogenes serotype 4b str. F2365 2799336 YP_013618.1 CDS LMOf2365_1018 NC_002973.6 1027501 1029669 R identified by similarity to SP:Q9S5Z2; match to protein family HMM PF00004; match to protein family HMM PF02151; ATP-dependent Clp protease, ATP-binding subunit ClpE complement(1027501..1029669) Listeria monocytogenes serotype 4b str. F2365 2799337 YP_013619.1 CDS LMOf2365_1019 NC_002973.6 1029833 1030444 R identified by similarity to GP:16413456; match to protein family HMM PF02517; CAAX amino terminal protease complement(1029833..1030444) Listeria monocytogenes serotype 4b str. F2365 2799335 YP_013620.1 CDS LMOf2365_1020 NC_002973.6 1030590 1031381 D identified by similarity to OMNI:NTL01MT01767; hypothetical protein 1030590..1031381 Listeria monocytogenes serotype 4b str. F2365 2798619 YP_013621.1 CDS LMOf2365_1021 NC_002973.6 1031382 1032854 R identified by similarity to SP:P54979; phytoene dehydrogenase complement(1031382..1032854) Listeria monocytogenes serotype 4b str. F2365 2798641 YP_013622.1 CDS LMOf2365_1022 NC_002973.6 1032959 1033243 R identified by similarity to OMNI:SA1035; hypothetical protein complement(1032959..1033243) Listeria monocytogenes serotype 4b str. F2365 2798434 YP_013623.1 CDS ptsH NC_002973.6 1033550 1033816 D identified by similarity to SP:P07515; match to protein family HMM PF00381; match to protein family HMM TIGR01003; phosphocarrier protein HPr 1033550..1033816 Listeria monocytogenes serotype 4b str. F2365 2799338 YP_013624.1 CDS ptsI NC_002973.6 1033816 1035534 D identified by similarity to SP:P08838; match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; phosphoenolpyruvate-protein phosphotransferase 1033816..1035534 Listeria monocytogenes serotype 4b str. F2365 2798247 YP_013625.1 CDS LMOf2365_1025 NC_002973.6 1035647 1036681 D identified by similarity to OMNI:NTL01LI0993; match to protein family HMM PF02698; hypothetical protein 1035647..1036681 Listeria monocytogenes serotype 4b str. F2365 2799443 YP_013626.1 CDS LMOf2365_1026 NC_002973.6 1036694 1037554 D identified by similarity to SP:O34948; match to protein family HMM PF03446; 3-hydroxyisobutyrate dehydrogenase 1036694..1037554 Listeria monocytogenes serotype 4b str. F2365 2798048 YP_013627.1 CDS LMOf2365_1027 NC_002973.6 1037593 1038738 R identified by similarity to GP:6318592; match to protein family HMM PF00155; aromatic amino acid aminotransferase complement(1037593..1038738) Listeria monocytogenes serotype 4b str. F2365 2797961 YP_013628.1 CDS LMOf2365_1028 NC_002973.6 1038958 1039179 D hypothetical protein 1038958..1039179 Listeria monocytogenes serotype 4b str. F2365 2798042 YP_013629.1 CDS LMOf2365_1029 NC_002973.6 1039484 1039717 D identified by similarity to OMNI:SP0822; hypothetical protein 1039484..1039717 Listeria monocytogenes serotype 4b str. F2365 2797415 YP_013630.1 CDS LMOf2365_1030 NC_002973.6 1039919 1040371 D identified by similarity to OMNI:NTL01LI0998; match to protein family HMM PF00571; hypothetical protein 1039919..1040371 Listeria monocytogenes serotype 4b str. F2365 2798901 YP_013631.1 CDS LMOf2365_1031 NC_002973.6 1040368 1041246 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 1040368..1041246 Listeria monocytogenes serotype 4b str. F2365 2798190 YP_013632.1 CDS LMOf2365_1032 NC_002973.6 1041294 1042004 D identified by match to protein family HMM PF00132; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 1041294..1042004 Listeria monocytogenes serotype 4b str. F2365 2799767 YP_013633.1 CDS LMOf2365_1033 NC_002973.6 1042068 1043183 D identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891; M20/M25/M40 family peptidase 1042068..1043183 Listeria monocytogenes serotype 4b str. F2365 2799064 YP_013634.1 CDS LMOf2365_1034 NC_002973.6 1043227 1044072 R identified by similarity to OMNI:NTL01BH2669; match to protein family HMM PF00924; mechanosensitive ion channel family protein complement(1043227..1044072) Listeria monocytogenes serotype 4b str. F2365 2799065 YP_013635.1 CDS LMOf2365_1035 NC_002973.6 1044444 1045637 D identified by similarity to SP:P46920; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186; glycine betaine/L-proline ABC transporter ATP-binding protein 1044444..1045637 Listeria monocytogenes serotype 4b str. F2365 2798404 YP_013636.1 CDS LMOf2365_1036 NC_002973.6 1045630 1046478 D identified by similarity to SP:P46921; match to protein family HMM PF00528; glycine betaine/L-proline ABC transporter permease 1045630..1046478 Listeria monocytogenes serotype 4b str. F2365 2798405 YP_013637.1 CDS LMOf2365_1037 NC_002973.6 1046492 1047394 D identified by similarity to SP:P46922; match to protein family HMM PF04069; glycine betaine/L-proline ABC transporter substrate-binding protein 1046492..1047394 Listeria monocytogenes serotype 4b str. F2365 2797160 YP_013638.1 CDS LMOf2365_1038 NC_002973.6 1047509 1048000 D identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830; PTS system glucose-specific transporter subunit IIA 1047509..1048000 Listeria monocytogenes serotype 4b str. F2365 2797537 YP_013639.1 CDS LMOf2365_1039 NC_002973.6 1048112 1048807 D identified by match to protein family HMM PF03932; cutC family protein 1048112..1048807 Listeria monocytogenes serotype 4b str. F2365 2797224 YP_013640.1 CDS LMOf2365_1040 NC_002973.6 1048888 1049760 D identified by similarity to OMNI:NTL01LI1008; hypothetical protein 1048888..1049760 Listeria monocytogenes serotype 4b str. F2365 2797225 YP_013641.1 CDS LMOf2365_1041 NC_002973.6 1049904 1050608 D identified by similarity to GP:16413478; hypothetical protein 1049904..1050608 Listeria monocytogenes serotype 4b str. F2365 2799207 YP_013642.1 CDS LMOf2365_1042 NC_002973.6 1050605 1051663 D identified by match to protein family HMM PF02518; histidine kinase 1050605..1051663 Listeria monocytogenes serotype 4b str. F2365 2799208 YP_013643.1 CDS LMOf2365_1043 NC_002973.6 1051660 1052298 D identified by match to protein family HMM PF00072; match to protein family HMM PF00196; DNA-binding response regulator 1051660..1052298 Listeria monocytogenes serotype 4b str. F2365 2798634 YP_013644.1 CDS LMOf2365_1044 NC_002973.6 1052317 1052976 D identified by match to protein family HMM PF02080; match to protein family HMM PF02254; TrkA domain-containing protein 1052317..1052976 Listeria monocytogenes serotype 4b str. F2365 2798579 YP_013645.1 CDS LMOf2365_1045 NC_002973.6 1053132 1054052 D identified by similarity to OMNI:NTL01LI1013; hypothetical protein 1053132..1054052 Listeria monocytogenes serotype 4b str. F2365 2798530 YP_013646.1 CDS LMOf2365_1046 NC_002973.6 1054049 1054900 D identified by similarity to OMNI:NTL01LI1014; hypothetical protein 1054049..1054900 Listeria monocytogenes serotype 4b str. F2365 2798531 YP_013647.1 CDS LMOf2365_1047 NC_002973.6 1054941 1055906 R identified by similarity to SP:Q02115; match to protein family HMM PF03816; match to protein family HMM TIGR00350; transcriptional regulator complement(1054941..1055906) Listeria monocytogenes serotype 4b str. F2365 2799276 YP_013648.1 CDS LMOf2365_1048 NC_002973.6 1056015 1057682 R identified by match to protein family HMM PF00753; match to protein family HMM TIGR00649; metallo-beta-lactamase complement(1056015..1057682) Listeria monocytogenes serotype 4b str. F2365 2799277 YP_013649.1 CDS LMOf2365_1049 NC_002973.6 1057689 1057898 R identified by similarity to OMNI:NTL01LI1017; hypothetical protein complement(1057689..1057898) Listeria monocytogenes serotype 4b str. F2365 2798439 YP_013650.1 CDS LMOf2365_1050 NC_002973.6 1058382 1059152 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; cof family hydrolase 1058382..1059152 Listeria monocytogenes serotype 4b str. F2365 2799313 YP_013651.1 CDS LMOf2365_1051 NC_002973.6 1059200 1060228 R identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator complement(1059200..1060228) Listeria monocytogenes serotype 4b str. F2365 2799323 YP_013652.1 CDS LMOf2365_1052 NC_002973.6 1060491 1061894 D identified by similarity to OMNI:TM0951; hypothetical protein 1060491..1061894 Listeria monocytogenes serotype 4b str. F2365 2799324 YP_013653.1 CDS LMOf2365_1053 NC_002973.6 1061910 1062734 D identified by similarity to SP:Q58094; match to protein family HMM PF00456; transketolase 1061910..1062734 Listeria monocytogenes serotype 4b str. F2365 2799166 YP_013654.1 CDS LMOf2365_1054 NC_002973.6 1062727 1063674 D identified by match to protein family HMM PF02779; match to protein family HMM PF02780; transketolase, C-terminal subunit 1062727..1063674 Listeria monocytogenes serotype 4b str. F2365 2799167 YP_013655.1 CDS glpK-1 NC_002973.6 1063671 1065134 D identified by similarity to SP:P08859; match to protein family HMM PF00370; match to protein family HMM PF02782; glycerol kinase 1063671..1065134 Listeria monocytogenes serotype 4b str. F2365 2798657 YP_013656.1 CDS LMOf2365_1056 NC_002973.6 1065131 1066987 D identified by similarity to SP:P08722; match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR00830; PTS system beta-glucoside-specific transporter subunit IIABC 1065131..1066987 Listeria monocytogenes serotype 4b str. F2365 2799121 YP_013657.1 CDS LMOf2365_1057 NC_002973.6 1067007 1068272 D identified by similarity to OMNI:NTL01BMA0834; hypothetical protein 1067007..1068272 Listeria monocytogenes serotype 4b str. F2365 2797142 YP_013658.1 CDS LMOf2365_1058 NC_002973.6 1068333 1069136 R identified by match to protein family HMM PF05675; hypothetical protein complement(1068333..1069136) Listeria monocytogenes serotype 4b str. F2365 2797143 YP_013659.1 CDS mobA NC_002973.6 1069204 1069785 R identified by similarity to SP:Q9K8I9; molybdopterin-guanine dinucleotide biosynthesis protein MobA complement(1069204..1069785) Listeria monocytogenes serotype 4b str. F2365 2797425 YP_013660.1 CDS modC NC_002973.6 1069766 1070428 R identified by similarity to SP:P37732; match to protein family HMM PF00005; molybdenum ABC transporter ATP-binding protein complement(1069766..1070428) Listeria monocytogenes serotype 4b str. F2365 2797426 YP_013661.1 CDS modB NC_002973.6 1070431 1071102 R identified by similarity to SP:P09834; match to protein family HMM PF00528; molybdenum ABC transporter permease complement(1070431..1071102) Listeria monocytogenes serotype 4b str. F2365 2798555 YP_013662.1 CDS modA NC_002973.6 1071206 1071976 D identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256; molybdenum ABC transporter molybdenum-binding protein 1071206..1071976 Listeria monocytogenes serotype 4b str. F2365 2798562 YP_013663.1 CDS moeA NC_002973.6 1072071 1073294 D identified by similarity to SP:P12281; match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis protein MoeA 1072071..1073294 Listeria monocytogenes serotype 4b str. F2365 2798509 YP_013664.1 CDS mobB NC_002973.6 1073273 1073758 D identified by similarity to SP:P44902; match to protein family HMM PF03205; match to protein family HMM TIGR00176; molybdopterin-guanine dinucleotide biosynthesis protein MobB 1073273..1073758 Listeria monocytogenes serotype 4b str. F2365 2798510 YP_013665.1 CDS moaE NC_002973.6 1073755 1074177 D identified by similarity to SP:O31705; match to protein family HMM PF02391; molybdenum cofactor biosynthesis protein E 1073755..1074177 Listeria monocytogenes serotype 4b str. F2365 2798462 YP_013666.1 CDS moaD NC_002973.6 1074161 1074409 D identified by similarity to SP:Q56209; match to protein family HMM TIGR01682; molybdenum cofactor biosynthesis protein D 1074161..1074409 Listeria monocytogenes serotype 4b str. F2365 2798463 YP_013667.1 CDS moaC NC_002973.6 1074422 1074904 D MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 1074422..1074904 Listeria monocytogenes serotype 4b str. F2365 2799123 YP_013668.1 CDS moaA NC_002973.6 1074933 1075934 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1074933..1075934 Listeria monocytogenes serotype 4b str. F2365 2797559 YP_013669.1 CDS moaB NC_002973.6 1075969 1076457 R identified by similarity to SP:P30746; match to protein family HMM PF00994; match to protein family HMM TIGR00177; molybdenum cofactor biosynthesis protein B complement(1075969..1076457) Listeria monocytogenes serotype 4b str. F2365 2797916 YP_013670.1 CDS moeB NC_002973.6 1076469 1077467 R identified by similarity to GP:13702076; match to protein family HMM PF00899; match to protein family HMM PF05237; molybdopterin biosynthesis protein MoeB complement(1076469..1077467) Listeria monocytogenes serotype 4b str. F2365 2797917 YP_013671.1 CDS LMOf2365_1071 NC_002973.6 1077599 1078153 D identified by similarity to OMNI:NTL01LI1032; hypothetical protein 1077599..1078153 Listeria monocytogenes serotype 4b str. F2365 2797500 YP_013672.1 CDS def NC_002973.6 1078202 1078753 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(1078202..1078753) Listeria monocytogenes serotype 4b str. F2365 2797501 YP_013673.1 CDS pdhA NC_002973.6 1079587 1080702 D identified by similarity to GP:40041; match to protein family HMM PF00676; pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase subunit alpha 1079587..1080702 Listeria monocytogenes serotype 4b str. F2365 2799237 YP_013674.1 CDS pdhB NC_002973.6 1080705 1081682 D identified by similarity to SP:P21882; match to protein family HMM PF02779; match to protein family HMM PF02780; pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase subunit beta 1080705..1081682 Listeria monocytogenes serotype 4b str. F2365 2797472 YP_013675.1 CDS LMOf2365_1075 NC_002973.6 1081793 1083427 D Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA; dihydrolipoamide acetyltransferase 1081793..1083427 Listeria monocytogenes serotype 4b str. F2365 2799179 YP_013676.1 CDS LMOf2365_1076 NC_002973.6 1083432 1084835 D E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1083432..1084835 Listeria monocytogenes serotype 4b str. F2365 2799180 YP_013677.1 CDS LMOf2365_1077 NC_002973.6 1085022 1085333 D identified by similarity to OMNI:NTL01LI1038; hypothetical protein 1085022..1085333 Listeria monocytogenes serotype 4b str. F2365 2797443 YP_013678.1 CDS LMOf2365_1078 NC_002973.6 1085462 1086415 D identified by match to protein family HMM PF02866; lactate/malate dehydrogenase 1085462..1086415 Listeria monocytogenes serotype 4b str. F2365 2797444 YP_013679.1 CDS LMOf2365_1079 NC_002973.6 1086415 1086687 D identified by similarity to OMNI:NTL01BS01465; match to protein family HMM PF05256; hypothetical protein 1086415..1086687 Listeria monocytogenes serotype 4b str. F2365 2797251 YP_013680.1 CDS LMOf2365_1080 NC_002973.6 1086709 1087239 D identified by similarity to OMNI:NTL01LI1041; hypothetical protein 1086709..1087239 Listeria monocytogenes serotype 4b str. F2365 2797192 YP_013681.1 CDS LMOf2365_1081 NC_002973.6 1087297 1088241 R identified by match to protein family HMM PF01544; magnesium transporter CorA family protein complement(1087297..1088241) Listeria monocytogenes serotype 4b str. F2365 2799117 YP_013682.1 CDS LMOf2365_1082 NC_002973.6 1088442 1089056 R identified by similarity to OMNI:NTL01LI1043; hypothetical protein complement(1088442..1089056) Listeria monocytogenes serotype 4b str. F2365 2799118 YP_013683.1 CDS LMOf2365_1083 NC_002973.6 1089187 1089960 D identified by match to protein family HMM PF00459; inositol monophosphatase 1089187..1089960 Listeria monocytogenes serotype 4b str. F2365 2799461 YP_013684.1 CDS typA NC_002973.6 1090152 1091990 D identified by similarity to SP:O07631; match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA 1090152..1091990 Listeria monocytogenes serotype 4b str. F2365 2799462 YP_013685.1 CDS LMOf2365_1085 NC_002973.6 1092168 1093043 D identified by similarity to OMNI:NTL01LI1046; hypothetical protein 1092168..1093043 Listeria monocytogenes serotype 4b str. F2365 2797139 YP_013686.1 CDS LMOf2365_1086 NC_002973.6 1093075 1093305 R identified by similarity to GP:16413516; hypothetical protein complement(1093075..1093305) Listeria monocytogenes serotype 4b str. F2365 2798481 YP_013687.1 CDS LMOf2365_1087 NC_002973.6 1093511 1093792 D depletion of this protein in Bacillus subtilis results in defects in cell morphology; crystal structure of Staphylococcus protein shows homodimer; ligand binding protein; hypothetical protein 1093511..1093792 Listeria monocytogenes serotype 4b str. F2365 2798577 YP_013688.1 CDS LMOf2365_1088 NC_002973.6 1093968 1095176 D identified by match to protein family HMM PF01098; cell cycle protein FtsW 1093968..1095176 Listeria monocytogenes serotype 4b str. F2365 2798578 YP_013689.1 CDS pyc NC_002973.6 1095454 1098894 D biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 1095454..1098894 Listeria monocytogenes serotype 4b str. F2365 2798563 YP_013690.1 CDS LMOf2365_1090 NC_002973.6 1099048 1099941 D identified by match to protein family HMM PF01497; ABC transporter substrate-binding protein 1099048..1099941 Listeria monocytogenes serotype 4b str. F2365 2798564 YP_013691.1 CDS LMOf2365_1091 NC_002973.6 1100235 1101026 D identified by similarity to SP:P42953; match to protein family HMM PF01061; techoic acid ABC transporter efflux permease 1100235..1101026 Listeria monocytogenes serotype 4b str. F2365 2798520 YP_013692.1 CDS LMOf2365_1092 NC_002973.6 1101039 1102046 D identified by similarity to SP:P42954; match to protein family HMM PF00005; techoic acid ABC transporter ATP-binding protein 1101039..1102046 Listeria monocytogenes serotype 4b str. F2365 2798469 YP_013693.1 CDS LMOf2365_1093 NC_002973.6 1102270 1104594 D identified by match to protein family HMM PF01832; N-acetylmuramoyl-L-alanine amidase 1102270..1104594 Listeria monocytogenes serotype 4b str. F2365 2799262 YP_013694.1 CDS LMOf2365_1094 NC_002973.6 1104657 1106663 R identified by similarity to OMNI:NTL01LI1055; hypothetical protein complement(1104657..1106663) Listeria monocytogenes serotype 4b str. F2365 2799263 YP_013695.1 CDS LMOf2365_1095 NC_002973.6 1106955 1107938 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 1106955..1107938 Listeria monocytogenes serotype 4b str. F2365 2799301 YP_013696.1 CDS LMOf2365_1096 NC_002973.6 1107950 1110052 D hypothetical protein 1107950..1110052 Listeria monocytogenes serotype 4b str. F2365 2799302 YP_013697.1 CDS LMOf2365_1097 NC_002973.6 1110083 1112407 D identified by match to protein family HMM PF00535; match to protein family HMM PF04464; glycosyl transferase family protein 1110083..1112407 Listeria monocytogenes serotype 4b str. F2365 2799091 YP_013698.1 CDS LMOf2365_1098 NC_002973.6 1112404 1113414 D identified by similarity to OMNI:NTL01LI1059; hypothetical protein 1112404..1113414 Listeria monocytogenes serotype 4b str. F2365 2799272 YP_013699.1 CDS galU NC_002973.6 1113463 1114350 R identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099; UTP-glucose-1-phosphate uridylyltransferase complement(1113463..1114350) Listeria monocytogenes serotype 4b str. F2365 2799327 YP_013700.1 CDS ispD NC_002973.6 1114574 1115287 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1114574..1115287 Listeria monocytogenes serotype 4b str. F2365 2799328 YP_013701.1 CDS LMOf2365_1101 NC_002973.6 1115280 1116305 D identified by match to protein family HMM PF00107; zinc-dependent alcohol dehydrogenase 1115280..1116305 Listeria monocytogenes serotype 4b str. F2365 2799286 YP_013702.1 CDS LMOf2365_1102 NC_002973.6 1116448 1117827 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 1116448..1117827 Listeria monocytogenes serotype 4b str. F2365 2799287 YP_013703.1 CDS LMOf2365_1103 NC_002973.6 1117827 1118981 D identified by similarity to SP:P13485; match to protein family HMM PF04464; teichoic acid biosynthesis domain-containing protein 1117827..1118981 Listeria monocytogenes serotype 4b str. F2365 2799297 YP_013704.1 CDS LMOf2365_1104 NC_002973.6 1118994 1120145 D identified by similarity to SP:P27621; match to protein family HMM PF04464; teichoic acid biosynthesis protein B 1118994..1120145 Listeria monocytogenes serotype 4b str. F2365 2799024 YP_013705.1 CDS tagD NC_002973.6 1120210 1120593 D identified by similarity to SP:P27623; match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01518; glycerol-3-phosphate cytidylyltransferase 1120210..1120593 Listeria monocytogenes serotype 4b str. F2365 2798430 YP_013706.1 CDS LMOf2365_1106 NC_002973.6 1120711 1122201 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1120711..1122201 Listeria monocytogenes serotype 4b str. F2365 2798431 YP_013707.1 CDS nadE NC_002973.6 1122213 1123037 D catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1122213..1123037 Listeria monocytogenes serotype 4b str. F2365 2798443 YP_013708.1 CDS LMOf2365_1108 NC_002973.6 1123050 1123358 D identified by similarity to OMNI:CC1971; match to protein family HMM PF03992; hypothetical protein 1123050..1123358 Listeria monocytogenes serotype 4b str. F2365 2798444 YP_013709.1 CDS LMOf2365_1109 NC_002973.6 1123418 1123822 D identified by similarity to SP:P46318; match to protein family HMM PF02302; PTS system transporter subunit IIB 1123418..1123822 Listeria monocytogenes serotype 4b str. F2365 2798450 YP_013710.1 CDS guaA NC_002973.6 1123963 1125507 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1123963..1125507 Listeria monocytogenes serotype 4b str. F2365 2798486 YP_013711.1 CDS LMOf2365_1111 NC_002973.6 1125798 1126154 D identified by similarity to OMNI:NTL01BH3224; hypothetical protein 1125798..1126154 Listeria monocytogenes serotype 4b str. F2365 2798500 YP_013712.1 CDS LMOf2365_1112 NC_002973.6 1126762 1126887 R hypothetical protein complement(1126762..1126887) Listeria monocytogenes serotype 4b str. F2365 2798501 YP_013713.1 CDS LMOf2365_1113 NC_002973.6 1126911 1127798 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1126911..1127798 Listeria monocytogenes serotype 4b str. F2365 2798521 YP_013714.1 CDS LMOf2365_1114 NC_002973.6 1127798 1128547 D ABC transporter permease 1127798..1128547 Listeria monocytogenes serotype 4b str. F2365 2798522 YP_013715.1 CDS LMOf2365_1115 NC_002973.6 1128588 1128905 D hypothetical protein 1128588..1128905 Listeria monocytogenes serotype 4b str. F2365 2798552 YP_013716.1 CDS LMOf2365_1116 NC_002973.6 1128902 1129777 D hypothetical protein 1128902..1129777 Listeria monocytogenes serotype 4b str. F2365 2798547 YP_013717.1 CDS LMOf2365_1117 NC_002973.6 1129785 1130702 D hypothetical protein 1129785..1130702 Listeria monocytogenes serotype 4b str. F2365 2798592 YP_013718.1 CDS LMOf2365_1118 NC_002973.6 1130695 1132008 D identified by similarity to GP:19747978; hypothetical protein 1130695..1132008 Listeria monocytogenes serotype 4b str. F2365 2798593 YP_013719.1 CDS LMOf2365_1119 NC_002973.6 1132001 1132588 D identified by match to protein family HMM PF02517; CAAX amino terminal protease 1132001..1132588 Listeria monocytogenes serotype 4b str. F2365 2798646 YP_013720.1 CDS LMOf2365_1120 NC_002973.6 1132833 1133606 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 1132833..1133606 Listeria monocytogenes serotype 4b str. F2365 2798647 YP_013721.1 CDS LMOf2365_1121 NC_002973.6 1133671 1134027 D identified by match to protein family HMM PF00903; glyoxalase 1133671..1134027 Listeria monocytogenes serotype 4b str. F2365 2799135 YP_013722.1 CDS LMOf2365_1122 NC_002973.6 1134444 1134779 R hypothetical protein complement(1134444..1134779) Listeria monocytogenes serotype 4b str. F2365 2797123 YP_013723.1 CDS LMOf2365_1123 NC_002973.6 1134754 1135566 R hypothetical protein complement(1134754..1135566) Listeria monocytogenes serotype 4b str. F2365 2797154 YP_013724.1 CDS LMOf2365_1125 NC_002973.6 1136256 1136606 D identified by similarity to GP:16413544; hypothetical protein 1136256..1136606 Listeria monocytogenes serotype 4b str. F2365 2799159 YP_013725.1 CDS LMOf2365_1126 NC_002973.6 1136609 1136749 D identified by similarity to OMNI:NTL01LI1076; hypothetical protein 1136609..1136749 Listeria monocytogenes serotype 4b str. F2365 2797207 YP_013726.1 CDS LMOf2365_1127 NC_002973.6 1136761 1137129 D hypothetical protein 1136761..1137129 Listeria monocytogenes serotype 4b str. F2365 2797208 YP_013727.1 CDS LMOf2365_1128 NC_002973.6 1137166 1137585 D identified by similarity to OMNI:NTL01LI1077; hypothetical protein 1137166..1137585 Listeria monocytogenes serotype 4b str. F2365 2797231 YP_013728.1 CDS LMOf2365_1129 NC_002973.6 1137671 1138144 D identified by similarity to OMNI:NTL01LI1078; hypothetical protein 1137671..1138144 Listeria monocytogenes serotype 4b str. F2365 2797232 YP_013729.1 CDS LMOf2365_1130 NC_002973.6 1138134 1138571 D identified by similarity to OMNI:NTL01LI1079; hypothetical protein 1138134..1138571 Listeria monocytogenes serotype 4b str. F2365 2797468 YP_013730.1 CDS LMOf2365_1131 NC_002973.6 1138975 1139313 D identified by similarity to OMNI:NTL01LI1080; hypothetical protein 1138975..1139313 Listeria monocytogenes serotype 4b str. F2365 2797437 YP_013731.1 CDS LMOf2365_1132 NC_002973.6 1139331 1139774 D identified by similarity to OMNI:NTL01LI1082; match to protein family HMM PF00583; acetyltransferase 1139331..1139774 Listeria monocytogenes serotype 4b str. F2365 2797238 YP_013732.1 CDS LMOf2365_1133 NC_002973.6 1139774 1140229 D identified by similarity to OMNI:EF0116; hypothetical protein 1139774..1140229 Listeria monocytogenes serotype 4b str. F2365 2797239 YP_013733.1 CDS LMOf2365_1134 NC_002973.6 1140243 1141241 R identified by similarity to GP:19916933; hypothetical protein complement(1140243..1141241) Listeria monocytogenes serotype 4b str. F2365 2797259 YP_013734.1 CDS LMOf2365_1135 NC_002973.6 1141238 1141834 R identified by match to protein family HMM PF00583; acetyltransferase complement(1141238..1141834) Listeria monocytogenes serotype 4b str. F2365 2797260 YP_013735.1 CDS LMOf2365_1136 NC_002973.6 1141831 1142550 R identified by similarity to OMNI:NTL01LI1086; match to protein family HMM PF00376; hypothetical protein complement(1141831..1142550) Listeria monocytogenes serotype 4b str. F2365 2797201 YP_013736.1 CDS LMOf2365_1137 NC_002973.6 1142801 1144516 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 1142801..1144516 Listeria monocytogenes serotype 4b str. F2365 2797455 YP_013737.1 CDS LMOf2365_1138 NC_002973.6 1144518 1146164 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 1144518..1146164 Listeria monocytogenes serotype 4b str. F2365 2797507 YP_013738.1 CDS LMOf2365_1139 NC_002973.6 1146203 1146511 R identified by similarity to OMNI:NTL01BS01198; hypothetical protein complement(1146203..1146511) Listeria monocytogenes serotype 4b str. F2365 2797508 YP_013739.1 CDS LMOf2365_1140 NC_002973.6 1146579 1146926 D identified by match to protein family HMM PF00376; MerR family transcriptional regulator 1146579..1146926 Listeria monocytogenes serotype 4b str. F2365 2797131 YP_013740.1 CDS LMOf2365_1141 NC_002973.6 1146951 1148090 D hypothetical protein 1146951..1148090 Listeria monocytogenes serotype 4b str. F2365 2797132 YP_013741.1 CDS LMOf2365_1142 NC_002973.6 1148209 1148679 D identified by similarity to GP:19068992; hypothetical protein 1148209..1148679 Listeria monocytogenes serotype 4b str. F2365 2797516 YP_013742.1 CDS LMOf2365_1143 NC_002973.6 1148676 1148966 D hypothetical protein 1148676..1148966 Listeria monocytogenes serotype 4b str. F2365 2797149 YP_013743.1 CDS LMOf2365_1144 NC_002973.6 1149246 1150781 D identified by match to protein family HMM PF00560; match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 1149246..1150781 Listeria monocytogenes serotype 4b str. F2365 2797620 YP_013744.1 CDS LMOf2365_1145 NC_002973.6 1150816 1151163 R identified by similarity to GP:15025581; hypothetical protein complement(1150816..1151163) Listeria monocytogenes serotype 4b str. F2365 2797621 YP_013745.1 CDS clpP-1 NC_002973.6 1151228 1151800 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(1151228..1151800) Listeria monocytogenes serotype 4b str. F2365 2799733 YP_013746.1 CDS LMOf2365_1147 NC_002973.6 1151931 1152338 R identified by similarity to OMNI:SA1219; hypothetical protein complement(1151931..1152338) Listeria monocytogenes serotype 4b str. F2365 2799734 YP_013747.1 CDS LMOf2365_1148 NC_002973.6 1152430 1152909 D identified by similarity to GP:3172404; siroheme synthase 1152430..1152909 Listeria monocytogenes serotype 4b str. F2365 2797268 YP_013748.1 CDS LMOf2365_1149 NC_002973.6 1153028 1154392 D identified by similarity to OMNI:NTL01ST2050; match to protein family HMM PF00037; match to protein family HMM PF01512; PduS protein 1153028..1154392 Listeria monocytogenes serotype 4b str. F2365 2797528 YP_013749.1 CDS LMOf2365_1150 NC_002973.6 1154389 1154943 D identified by similarity to OMNI:NTL01ST2051; match to protein family HMM PF00936; PduT protein 1154389..1154943 Listeria monocytogenes serotype 4b str. F2365 2797545 YP_013750.1 CDS pduU NC_002973.6 1155091 1155441 D identified by similarity to SP:Q9XDM7; match to protein family HMM PF06132; propanediol utilization protein PduU 1155091..1155441 Listeria monocytogenes serotype 4b str. F2365 2797546 YP_013751.1 CDS LMOf2365_1152 NC_002973.6 1155447 1155878 D identified by similarity to SP:Q9XDM6; propanediol utilization protein PduV 1155447..1155878 Listeria monocytogenes serotype 4b str. F2365 2797797 YP_013752.1 CDS LMOf2365_1153 NC_002973.6 1155903 1156646 D identified by similarity to GP:10173468; hypothetical protein 1155903..1156646 Listeria monocytogenes serotype 4b str. F2365 2797798 YP_013753.1 CDS cobU NC_002973.6 1156651 1157196 D identified by match to protein family HMM PF02283; cobinamide kinase/cobinamide phosphate guanylyltransferase 1156651..1157196 Listeria monocytogenes serotype 4b str. F2365 2798167 YP_013754.1 CDS cobS NC_002973.6 1157198 1157944 D identified by match to protein family HMM PF02654; match to protein family HMM TIGR00317; cobalamin 5'-phosphate synthase 1157198..1157944 Listeria monocytogenes serotype 4b str. F2365 2797186 YP_013755.1 CDS cobC NC_002973.6 1157945 1158520 D identified by similarity to SP:P52086; match to protein family HMM PF00300; alpha-ribazole-5'-phosphate phosphatase 1157945..1158520 Listeria monocytogenes serotype 4b str. F2365 2798666 YP_013756.1 CDS LMOf2365_1157 NC_002973.6 1158930 1159814 R identified by similarity to SP:Q05587; match to protein family HMM PF00165; PocR family transcriptional regulator complement(1158930..1159814) Listeria monocytogenes serotype 4b str. F2365 2798667 YP_013757.1 CDS LMOf2365_1158 NC_002973.6 1159883 1160050 R hypothetical protein complement(1159883..1160050) Listeria monocytogenes serotype 4b str. F2365 2798620 YP_013758.1 CDS pduA NC_002973.6 1160117 1160404 D identified by similarity to SP:P37448; match to protein family HMM PF00936; propanediol utilization protein PduA 1160117..1160404 Listeria monocytogenes serotype 4b str. F2365 2798621 YP_013759.1 CDS pduB NC_002973.6 1160499 1161200 D identified by similarity to SP:P37449; match to protein family HMM PF06000; propanediol utilization protein PduB 1160499..1161200 Listeria monocytogenes serotype 4b str. F2365 2798389 YP_013760.1 CDS pduC NC_002973.6 1161219 1162883 D identified by similarity to SP:P37450; match to protein family HMM PF02286; glycerol dehydratase large subunit 1161219..1162883 Listeria monocytogenes serotype 4b str. F2365 2798599 YP_013761.1 CDS pduD NC_002973.6 1162921 1163580 D identified by similarity to OMNI:NTL01ST2038; match to protein family HMM PF02288; propanediol utilization: dehydratase, medium subunit 1162921..1163580 Listeria monocytogenes serotype 4b str. F2365 2799037 YP_013762.1 CDS pduE NC_002973.6 1163597 1164109 D identified by similarity to OMNI:NTL01ST2039; match to protein family HMM PF02287; propanediol utilization dehydratase small subunit 1163597..1164109 Listeria monocytogenes serotype 4b str. F2365 2799038 YP_013763.1 CDS pduG NC_002973.6 1164155 1165975 D identified by similarity to OMNI:NTL01ST2040; propanediol utilization diol dehydratase reactivation protein 1164155..1165975 Listeria monocytogenes serotype 4b str. F2365 2799546 YP_013764.1 CDS LMOf2365_1165 NC_002973.6 1165972 1166319 D identified by similarity to GP:5069452; PduH protein 1165972..1166319 Listeria monocytogenes serotype 4b str. F2365 2799547 YP_013765.1 CDS LMOf2365_1166 NC_002973.6 1166332 1166769 D identified by similarity to GP:16503277; match to protein family HMM PF00936; propanediol utilization protein PduK 1166332..1166769 Listeria monocytogenes serotype 4b str. F2365 2797577 YP_013766.1 CDS LMOf2365_1167 NC_002973.6 1166794 1167069 D identified by similarity to OMNI:NTL01ST2042; match to protein family HMM PF00936; propanediol utilization protein PduJ 1166794..1167069 Listeria monocytogenes serotype 4b str. F2365 2798414 YP_013767.1 CDS LMOf2365_1168 NC_002973.6 1167073 1167708 D identified by similarity to OMNI:NTL01ST2044; match to protein family HMM PF06130; propanediol utilization protein PduL 1167073..1167708 Listeria monocytogenes serotype 4b str. F2365 2798428 YP_013768.1 CDS eutJ NC_002973.6 1167729 1168568 D identified by similarity to SP:P41794; ethanolamine utilization protein 1167729..1168568 Listeria monocytogenes serotype 4b str. F2365 2798429 YP_013769.1 CDS pduM NC_002973.6 1168565 1169044 D identified by similarity to OMNI:NTL01ST2045; propanediol utilization protein PduM 1168565..1169044 Listeria monocytogenes serotype 4b str. F2365 2798423 YP_013770.1 CDS pduN NC_002973.6 1169049 1169312 D identified by similarity to OMNI:NTL01ST2046; match to protein family HMM PF03319; propanediol utilization polyhedral bodies protein 1169049..1169312 Listeria monocytogenes serotype 4b str. F2365 2798424 YP_013771.1 CDS LMOf2365_1172 NC_002973.6 1169327 1170322 D identified by similarity to OMNI:NTL01ST2047; match to protein family HMM PF01923; match to protein family HMM PF03928; match to protein family HMM TIGR00636; PduO protein 1169327..1170322 Listeria monocytogenes serotype 4b str. F2365 2798411 YP_013772.1 CDS pduP NC_002973.6 1170329 1171738 D identified by similarity to OMNI:NTL01ST2048; match to protein family HMM PF00171; CoA-dependent propionaldehyde dehydrogenase 1170329..1171738 Listeria monocytogenes serotype 4b str. F2365 2798335 YP_013773.1 CDS pduQ NC_002973.6 1171754 1172872 D identified by similarity to OMNI:NTL01ST2049; match to protein family HMM PF00465; propanol dehydrogenase 1171754..1172872 Listeria monocytogenes serotype 4b str. F2365 2798384 YP_013774.1 CDS glpF-1 NC_002973.6 1172900 1173604 D identified by similarity to SP:P18156; match to protein family HMM PF00230; match to protein family HMM TIGR00861; glycerol uptake facilitator protein 1172900..1173604 Listeria monocytogenes serotype 4b str. F2365 2798385 YP_013775.1 CDS LMOf2365_1176 NC_002973.6 1173670 1174863 D identified by similarity to SP:P74879; match to protein family HMM PF00871; match to protein family HMM TIGR00016; propionate/acetate kinase 1173670..1174863 Listeria monocytogenes serotype 4b str. F2365 2798341 YP_013776.1 CDS LMOf2365_1177 NC_002973.6 1174877 1175962 D cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; threonine-phosphate decarboxylase 1174877..1175962 Listeria monocytogenes serotype 4b str. F2365 2798342 YP_013777.1 CDS LMOf2365_1178 NC_002973.6 1175952 1176827 D identified by similarity to OMNI:NTL01ST2055; match to protein family HMM PF00288; propanediol utilization protein PduX 1175952..1176827 Listeria monocytogenes serotype 4b str. F2365 2798348 YP_013778.1 CDS LMOf2365_1179 NC_002973.6 1176851 1176961 R hypothetical protein complement(1176851..1176961) Listeria monocytogenes serotype 4b str. F2365 2798358 YP_013779.1 CDS LMOf2365_1180 NC_002973.6 1176998 1177093 R hypothetical protein complement(1176998..1177093) Listeria monocytogenes serotype 4b str. F2365 2798321 YP_013780.1 CDS LMOf2365_1181 NC_002973.6 1177417 1178556 D identified by match to protein family HMM PF00465; alcohol dehydrogenase, iron-dependent 1177417..1178556 Listeria monocytogenes serotype 4b str. F2365 2798322 YP_013781.1 CDS LMOf2365_1182 NC_002973.6 1178840 1179412 D identified by match to protein family HMM PF00072; match to protein family HMM PF03861; transcription antiterminator response regulator 1178840..1179412 Listeria monocytogenes serotype 4b str. F2365 2798181 YP_013782.1 CDS LMOf2365_1183 NC_002973.6 1179405 1180862 D identified by match to protein family HMM PF02518; sensor histidine kinase 1179405..1180862 Listeria monocytogenes serotype 4b str. F2365 2798182 YP_013783.1 CDS eutA NC_002973.6 1180952 1182373 D ethanolamine utilization protein EutA; reactivating factor for ethanolamine ammonia lyase 1180952..1182373 Listeria monocytogenes serotype 4b str. F2365 2798201 YP_013784.1 CDS eutB NC_002973.6 1182415 1183779 D identified by similarity to SP:P19635; ethanolamine ammonia-lyase heavy chain 1182415..1183779 Listeria monocytogenes serotype 4b str. F2365 2798325 YP_013785.1 CDS eutC NC_002973.6 1183799 1184680 D catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit 1183799..1184680 Listeria monocytogenes serotype 4b str. F2365 2799020 YP_013786.1 CDS eutL NC_002973.6 1184703 1185356 D identified by similarity to SP:Q9ZFU9; match to protein family HMM PF06000; ethanolamine utilization protein 1184703..1185356 Listeria monocytogenes serotype 4b str. F2365 2799021 YP_013787.1 CDS LMOf2365_1188 NC_002973.6 1185371 1185892 D identified by similarity to SP:P77606; match to protein family HMM PF00936; ethanolamine utilization protein 1185371..1185892 Listeria monocytogenes serotype 4b str. F2365 2799042 YP_013788.1 CDS LMOf2365_1189 NC_002973.6 1185892 1187352 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase 1185892..1187352 Listeria monocytogenes serotype 4b str. F2365 2799043 YP_013789.1 CDS LMOf2365_1190 NC_002973.6 1187384 1187668 D identified by similarity to SP:P41791; match to protein family HMM PF00936; ethanolamine utilization protein 1187384..1187668 Listeria monocytogenes serotype 4b str. F2365 2798611 YP_013790.1 CDS LMOf2365_1191 NC_002973.6 1187834 1188589 D identified by similarity to GP:18144564; match to protein family HMM PF01923; hypothetical protein 1187834..1188589 Listeria monocytogenes serotype 4b str. F2365 2799047 YP_013791.1 CDS LMOf2365_1192 NC_002973.6 1188602 1189243 D identified by similarity to GP:18144565; match to protein family HMM PF06130; hypothetical protein 1188602..1189243 Listeria monocytogenes serotype 4b str. F2365 2798222 YP_013792.1 CDS LMOf2365_1193 NC_002973.6 1189246 1189812 D identified by similarity to GP:18144566; hypothetical protein 1189246..1189812 Listeria monocytogenes serotype 4b str. F2365 2798223 YP_013793.1 CDS LMOf2365_1194 NC_002973.6 1189827 1190096 D identified by similarity to SP:P77633; match to protein family HMM PF03319; carboxysome protein 1189827..1190096 Listeria monocytogenes serotype 4b str. F2365 2797923 YP_013794.1 CDS LMOf2365_1195 NC_002973.6 1190089 1190634 D identified by similarity to GP:18144568; hypothetical protein 1190089..1190634 Listeria monocytogenes serotype 4b str. F2365 2797924 YP_013795.1 CDS LMOf2365_1196 NC_002973.6 1190650 1191771 D identified by similarity to SP:P76552; match to protein family HMM PF04346; hypothetical protein 1190650..1191771 Listeria monocytogenes serotype 4b str. F2365 2799450 YP_013796.1 CDS LMOf2365_1197 NC_002973.6 1191764 1192207 D identified by similarity to GP:18144570; match to protein family HMM PF06249; hypothetical protein 1191764..1192207 Listeria monocytogenes serotype 4b str. F2365 2798258 YP_013797.1 CDS LMOf2365_1198 NC_002973.6 1192249 1192764 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(1192249..1192764) Listeria monocytogenes serotype 4b str. F2365 2798986 YP_013798.1 CDS LMOf2365_1199 NC_002973.6 1193114 1193608 D identified by similarity to OMNI:NTL01LI1143; hypothetical protein 1193114..1193608 Listeria monocytogenes serotype 4b str. F2365 2798987 YP_013799.1 CDS cobB NC_002973.6 1193941 1195299 D responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 1193941..1195299 Listeria monocytogenes serotype 4b str. F2365 2798905 YP_013800.1 CDS cobD NC_002973.6 1195296 1196243 D CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 1195296..1196243 Listeria monocytogenes serotype 4b str. F2365 2798906 YP_013801.1 CDS cbiC NC_002973.6 1196256 1196888 D catalyzes the interconversion of cobalt-precorrin-8X and cobyrinic acid in the anaerobic biosynthesis of cobalamin; cobalt-precorrin-8X methylmutase 1196256..1196888 Listeria monocytogenes serotype 4b str. F2365 2798875 YP_013802.1 CDS cbiD NC_002973.6 1196904 1198025 D Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 1196904..1198025 Listeria monocytogenes serotype 4b str. F2365 2798955 YP_013803.1 CDS cbiE NC_002973.6 1198022 1198618 D catalyzes the methylation of C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W-a; cobalt-precorrin-6Y C(5)-methyltransferase 1198022..1198618 Listeria monocytogenes serotype 4b str. F2365 2799669 YP_013804.1 CDS cbiT NC_002973.6 1198608 1199177 D catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W; decarboxylating; cobalt-precorrin-6Y C(15)-methyltransferase 1198608..1199177 Listeria monocytogenes serotype 4b str. F2365 2799787 YP_013805.1 CDS cobM NC_002973.6 1199183 1199932 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR01465; precorrin-4 C(11)-methyltransferase 1199183..1199932 Listeria monocytogenes serotype 4b str. F2365 2797575 YP_013806.1 CDS cbiG NC_002973.6 1199919 1200950 D catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3; cobalamin biosynthesis protein CbiG 1199919..1200950 Listeria monocytogenes serotype 4b str. F2365 2798418 YP_013807.1 CDS cobJ NC_002973.6 1200947 1201672 D catalyzes the formation of precorrin-4 from precorrin-3B and S-adenosyl-L-methionine; precorrin-3B C(17)-methyltransferase 1200947..1201672 Listeria monocytogenes serotype 4b str. F2365 2799794 YP_013808.1 CDS cobK NC_002973.6 1201669 1202421 D identified by match to protein family HMM PF02571; match to protein family HMM TIGR00715; precorrin-6X reductase 1201669..1202421 Listeria monocytogenes serotype 4b str. F2365 2797950 YP_013809.1 CDS LMOf2365_1210 NC_002973.6 1202421 1203902 D identified by similarity to SP:Q59294; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01469; uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase 1202421..1203902 Listeria monocytogenes serotype 4b str. F2365 2799845 YP_013810.1 CDS cbiK NC_002973.6 1203899 1204684 D identified by similarity to SP:Q05592; match to protein family HMM PF06180; cobalt chelatase 1203899..1204684 Listeria monocytogenes serotype 4b str. F2365 2799846 YP_013811.1 CDS cobI NC_002973.6 1204677 1205387 D catalyzes the formation of precorrin-3A from precorrin-2; cobalt-precorrin-2 C(20)-methyltransferase 1204677..1205387 Listeria monocytogenes serotype 4b str. F2365 2797629 YP_013812.2 CDS cbiM NC_002973.6 1205468 1206118 D catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 1205468..1206118 Listeria monocytogenes serotype 4b str. F2365 2799742 YP_013813.1 CDS LMOf2365_1214 NC_002973.6 1206115 1206411 D periplasmic cobalt binding component of the cobalt transport system; cobalt transport protein CbiN 1206115..1206411 Listeria monocytogenes serotype 4b str. F2365 2798165 YP_013814.1 CDS cbiQ NC_002973.6 1206398 1207075 D identified by similarity to SP:Q05598; match to protein family HMM PF02361; cobalt transport protein CbiQ 1206398..1207075 Listeria monocytogenes serotype 4b str. F2365 2799888 YP_013815.1 CDS LMOf2365_1216 NC_002973.6 1207088 1207894 D identified by similarity to SP:Q05596; match to protein family HMM PF00005; match to protein family HMM TIGR01166; cobalt ABC transporter ATP-binding protein 1207088..1207894 Listeria monocytogenes serotype 4b str. F2365 2799681 YP_013816.1 CDS cobQ NC_002973.6 1207894 1209429 D catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 1207894..1209429 Listeria monocytogenes serotype 4b str. F2365 2799682 YP_013817.1 CDS LMOf2365_1218 NC_002973.6 1209393 1209959 D identified by match to protein family HMM PF01923; match to protein family HMM TIGR00636; ATP:cob(I)alamin adenosyltransferase 1209393..1209959 Listeria monocytogenes serotype 4b str. F2365 2799857 YP_013818.1 CDS LMOf2365_1219 NC_002973.6 1210004 1210471 R identified by match to protein family HMM PF04657; hypothetical protein complement(1210004..1210471) Listeria monocytogenes serotype 4b str. F2365 2797814 YP_013819.1 CDS LMOf2365_1220 NC_002973.6 1210486 1210935 R identified by match to protein family HMM PF04657; hypothetical protein complement(1210486..1210935) Listeria monocytogenes serotype 4b str. F2365 2797815 YP_013820.1 CDS LMOf2365_1221 NC_002973.6 1211024 1211554 D identified by similarity to OMNI:NTL01LI1165; hypothetical protein 1211024..1211554 Listeria monocytogenes serotype 4b str. F2365 2797073 YP_013821.1 CDS LMOf2365_1222 NC_002973.6 1211585 1211896 D identified by match to protein family HMM PF03551; PadR family transcriptional regulator 1211585..1211896 Listeria monocytogenes serotype 4b str. F2365 2799224 YP_013822.1 CDS LMOf2365_1223 NC_002973.6 1211899 1212450 D identified by similarity to OMNI:NTL01LI1167; hypothetical protein 1211899..1212450 Listeria monocytogenes serotype 4b str. F2365 2797097 YP_013823.1 CDS LMOf2365_1224 NC_002973.6 1212913 1213659 D identified by match to protein family HMM PF01832; N-acetylmuramoyl-L-alanine amidase 1212913..1213659 Listeria monocytogenes serotype 4b str. F2365 2798216 YP_013824.1 CDS LMOf2365_1225 NC_002973.6 1213929 1214942 D identified by match to protein family HMM PF01832; N-acetylmuramoyl-L-alanine amidase 1213929..1214942 Listeria monocytogenes serotype 4b str. F2365 2798217 YP_013825.1 CDS LMOf2365_1226 NC_002973.6 1215054 1216133 D identified by similarity to SP:Q48677; match to protein family HMM PF05343; peptidase 1215054..1216133 Listeria monocytogenes serotype 4b str. F2365 2798814 YP_013826.1 CDS LMOf2365_1227 NC_002973.6 1216159 1216917 D identified by match to protein family HMM PF00588; RNA methyltransferase 1216159..1216917 Listeria monocytogenes serotype 4b str. F2365 2797625 YP_013827.1 CDS LMOf2365_1228 NC_002973.6 1216962 1217321 R identified by similarity to OMNI:NTL01LI1172; hypothetical protein complement(1216962..1217321) Listeria monocytogenes serotype 4b str. F2365 2797626 YP_013828.1 CDS LMOf2365_1229 NC_002973.6 1217478 1217801 D identified by similarity to OMNI:NTL01LI1173; match to protein family HMM PF01638; hypothetical protein 1217478..1217801 Listeria monocytogenes serotype 4b str. F2365 2799847 YP_013829.1 CDS pheS NC_002973.6 1218169 1219221 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1218169..1219221 Listeria monocytogenes serotype 4b str. F2365 2798499 YP_013830.1 CDS pheT NC_002973.6 1219221 1221629 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1219221..1221629 Listeria monocytogenes serotype 4b str. F2365 2798162 YP_013831.1 CDS LMOf2365_1232 NC_002973.6 1221790 1222491 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1221790..1222491 Listeria monocytogenes serotype 4b str. F2365 2798242 YP_013832.1 CDS LMOf2365_1233 NC_002973.6 1222505 1225915 D identified by match to protein family HMM PF02687; match to protein family HMM TIGR01612; ABC transporter permease 1222505..1225915 Listeria monocytogenes serotype 4b str. F2365 2798243 YP_013833.1 CDS LMOf2365_1234 NC_002973.6 1226013 1226465 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1226013..1226465 Listeria monocytogenes serotype 4b str. F2365 2798882 YP_013834.1 CDS LMOf2365_1235 NC_002973.6 1226481 1229681 D identified by match to protein family HMM PF03176; match to protein family HMM TIGR01612; MmpL family membrane protein 1226481..1229681 Listeria monocytogenes serotype 4b str. F2365 2797408 YP_013835.1 CDS ung-2 NC_002973.6 1229785 1230459 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 1229785..1230459 Listeria monocytogenes serotype 4b str. F2365 2797409 YP_013836.1 CDS LMOf2365_1237 NC_002973.6 1230497 1231378 R An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease HIII complement(1230497..1231378) Listeria monocytogenes serotype 4b str. F2365 2798053 YP_013837.1 CDS LMOf2365_1238 NC_002973.6 1231532 1231840 D identified by similarity to GP:16413651; match to protein family HMM PF05164; hypothetical protein 1231532..1231840 Listeria monocytogenes serotype 4b str. F2365 2798095 YP_013838.1 CDS LMOf2365_1239 NC_002973.6 1231840 1232382 D identified by similarity to OMNI:NTL01LI1183; match to protein family HMM PF02674; CvpA family protein 1231840..1232382 Listeria monocytogenes serotype 4b str. F2365 2799399 YP_013839.1 CDS LMOf2365_1240 NC_002973.6 1232474 1234186 D identified by match to protein family HMM PF02231; match to protein family HMM PF02811; hypothetical protein 1232474..1234186 Listeria monocytogenes serotype 4b str. F2365 2799090 YP_013840.1 CDS mutS-1 NC_002973.6 1234209 1236566 D MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein 1234209..1236566 Listeria monocytogenes serotype 4b str. F2365 2799326 YP_013841.1 CDS trx-1 NC_002973.6 1236647 1236958 D identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 1236647..1236958 Listeria monocytogenes serotype 4b str. F2365 2799700 YP_013842.1 CDS uvrC NC_002973.6 1237034 1238845 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1237034..1238845 Listeria monocytogenes serotype 4b str. F2365 2799810 YP_013843.1 CDS LMOf2365_1244 NC_002973.6 1239026 1240240 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1239026..1240240 Listeria monocytogenes serotype 4b str. F2365 2799832 YP_013844.1 CDS LMOf2365_1245 NC_002973.6 1240296 1240781 R identified by similarity to OMNI:NTL01LI1189; hypothetical protein complement(1240296..1240781) Listeria monocytogenes serotype 4b str. F2365 2797161 YP_013845.1 CDS murI NC_002973.6 1240938 1241738 D converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1240938..1241738 Listeria monocytogenes serotype 4b str. F2365 2797727 YP_013846.1 CDS rph NC_002973.6 1241751 1242497 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 1241751..1242497 Listeria monocytogenes serotype 4b str. F2365 2798346 YP_013847.1 CDS LMOf2365_1248 NC_002973.6 1242501 1243112 D hydrolyzes non-standard nucleotides such as xanthine and inosine; nucleoside-triphosphatase 1242501..1243112 Listeria monocytogenes serotype 4b str. F2365 2798287 YP_013848.1 CDS LMOf2365_1249 NC_002973.6 1243149 1243673 D identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040; phosphoesterase 1243149..1243673 Listeria monocytogenes serotype 4b str. F2365 2798425 YP_013849.1 CDS LMOf2365_1251 NC_002973.6 1244302 1244421 D hypothetical protein 1244302..1244421 Listeria monocytogenes serotype 4b str. F2365 2799125 YP_013850.1 CDS LMOf2365_1252 NC_002973.6 1244457 1244930 D hypothetical protein 1244457..1244930 Listeria monocytogenes serotype 4b str. F2365 2799087 YP_013851.1 CDS LMOf2365_1253 NC_002973.6 1245036 1245398 D hypothetical protein 1245036..1245398 Listeria monocytogenes serotype 4b str. F2365 2798470 YP_013852.1 CDS LMOf2365_1254 NC_002973.6 1246066 1249314 D identified by match to protein family HMM PF00560; match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein 1246066..1249314 Listeria monocytogenes serotype 4b str. F2365 2799075 YP_013853.1 CDS LMOf2365_1255 NC_002973.6 1249437 1250795 D identified by similarity to OMNI:NTL01SM01795; hypothetical protein 1249437..1250795 Listeria monocytogenes serotype 4b str. F2365 2799289 YP_013854.1 CDS LMOf2365_1256 NC_002973.6 1250838 1251431 R identified by similarity to OMNI:SA2456; hypothetical protein complement(1250838..1251431) Listeria monocytogenes serotype 4b str. F2365 2799309 YP_013855.1 CDS LMOf2365_1257 NC_002973.6 1251568 1251975 R hypothetical protein complement(1251568..1251975) Listeria monocytogenes serotype 4b str. F2365 2799258 YP_013856.1 CDS LMOf2365_1258 NC_002973.6 1252140 1252739 D identified by match to protein family HMM PF00300; phosphoglycerate mutase 1252140..1252739 Listeria monocytogenes serotype 4b str. F2365 2799275 YP_013857.1 CDS LMOf2365_1259 NC_002973.6 1252771 1253031 R identified by similarity to OMNI:NTL01LI1203; hypothetical protein complement(1252771..1253031) Listeria monocytogenes serotype 4b str. F2365 2799322 YP_013858.1 CDS dbpA NC_002973.6 1253155 1254567 D identified by similarity to SP:P42305; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; ATP-dependent RNA helicase DbpA 1253155..1254567 Listeria monocytogenes serotype 4b str. F2365 2799261 YP_013859.1 CDS LMOf2365_1261 NC_002973.6 1254592 1254855 D identified by similarity to GP:16415862; hypothetical protein 1254592..1254855 Listeria monocytogenes serotype 4b str. F2365 2799296 YP_013860.1 CDS LMOf2365_1262 NC_002973.6 1255023 1255499 D identified by match to protein family HMM PF00293; MutT/nudix family protein 1255023..1255499 Listeria monocytogenes serotype 4b str. F2365 2799107 YP_013861.1 CDS LMOf2365_1263 NC_002973.6 1255537 1255782 R identified by similarity to OMNI:NTL01LI1206; hypothetical protein complement(1255537..1255782) Listeria monocytogenes serotype 4b str. F2365 2799285 YP_013862.1 CDS LMOf2365_1264 NC_002973.6 1255779 1256984 R identified by similarity to GP:19749018; transporter complement(1255779..1256984) Listeria monocytogenes serotype 4b str. F2365 2799249 YP_013863.1 CDS LMOf2365_1265 NC_002973.6 1257189 1257848 D identified by similarity to SP:P22262; transcriptional regulator 1257189..1257848 Listeria monocytogenes serotype 4b str. F2365 2799041 YP_013864.1 CDS LMOf2365_1266 NC_002973.6 1257820 1258062 D hypothetical protein 1257820..1258062 Listeria monocytogenes serotype 4b str. F2365 2799082 YP_013865.1 CDS LMOf2365_1267 NC_002973.6 1258149 1258997 R identified by match to protein family HMM PF02588; hypothetical protein complement(1258149..1258997) Listeria monocytogenes serotype 4b str. F2365 2799019 YP_013866.1 CDS LMOf2365_1268 NC_002973.6 1259195 1259302 R hypothetical protein complement(1259195..1259302) Listeria monocytogenes serotype 4b str. F2365 2799155 YP_013867.1 CDS LMOf2365_1269 NC_002973.6 1259327 1259464 R identified by similarity to OMNI:NTL01LI1210; hypothetical protein complement(1259327..1259464) Listeria monocytogenes serotype 4b str. F2365 2798338 YP_013868.1 CDS treR NC_002973.6 1259615 1260328 D identified by similarity to SP:P39796; match to protein family HMM PF00392; trehalose operon transcriptional repressor 1259615..1260328 Listeria monocytogenes serotype 4b str. F2365 2799023 YP_013869.1 CDS treC-2 NC_002973.6 1260359 1262005 R identified by similarity to SP:P28904; match to protein family HMM PF00128; trehalose-6-phosphate hydrolase complement(1260359..1262005) Listeria monocytogenes serotype 4b str. F2365 2798311 YP_013870.1 CDS treB NC_002973.6 1262024 1263508 R identified by similarity to SP:P36672; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; PTS system trehalose-specific transporter subunit IIBC complement(1262024..1263508) Listeria monocytogenes serotype 4b str. F2365 2798435 YP_013871.1 CDS LMOf2365_1273 NC_002973.6 1263626 1264087 D identified by match to protein family HMM PF00293; MutT/nudix family protein 1263626..1264087 Listeria monocytogenes serotype 4b str. F2365 2799115 YP_013872.1 CDS LMOf2365_1274 NC_002973.6 1264126 1264590 R identified by similarity to OMNI:NTL01LI1215; hypothetical protein complement(1264126..1264590) Listeria monocytogenes serotype 4b str. F2365 2797749 YP_013873.1 CDS LMOf2365_1275 NC_002973.6 1264779 1265693 D alpha/beta fold family hydrolase 1264779..1265693 Listeria monocytogenes serotype 4b str. F2365 2798415 YP_013874.1 CDS proA NC_002973.6 1265719 1266966 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(1265719..1266966) Listeria monocytogenes serotype 4b str. F2365 2799849 YP_013875.1 CDS proB NC_002973.6 1266950 1267780 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(1266950..1267780) Listeria monocytogenes serotype 4b str. F2365 2798289 YP_013876.1 CDS LMOf2365_1278 NC_002973.6 1267927 1269066 R identified by similarity to OMNI:NTL01LI1219; hypothetical protein complement(1267927..1269066) Listeria monocytogenes serotype 4b str. F2365 2799665 YP_013877.1 CDS LMOf2365_1279 NC_002973.6 1269146 1269541 R identified by similarity to SP:Q07683; match to protein family HMM PF01381; ans operon transcriptional repressor complement(1269146..1269541) Listeria monocytogenes serotype 4b str. F2365 2797942 YP_013878.1 CDS LMOf2365_1280 NC_002973.6 1269692 1269907 D identified by match to protein family HMM PF01381; DNA-binding protein 1269692..1269907 Listeria monocytogenes serotype 4b str. F2365 2799748 YP_013879.1 CDS LMOf2365_1281 NC_002973.6 1270031 1270564 D identified by similarity to OMNI:NTL01LI1292; hypothetical protein 1270031..1270564 Listeria monocytogenes serotype 4b str. F2365 2798333 YP_013880.1 CDS LMOf2365_1282 NC_002973.6 1270580 1271245 D lipoprotein 1270580..1271245 Listeria monocytogenes serotype 4b str. F2365 2798309 YP_013881.1 CDS LMOf2365_1283 NC_002973.6 1271507 1272445 D hypothetical protein 1271507..1272445 Listeria monocytogenes serotype 4b str. F2365 2798445 YP_013882.1 CDS tig NC_002973.6 1272560 1273843 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1272560..1273843 Listeria monocytogenes serotype 4b str. F2365 2799036 YP_013883.1 CDS LMOf2365_1285 NC_002973.6 1273929 1274021 D hypothetical protein 1273929..1274021 Listeria monocytogenes serotype 4b str. F2365 2799312 YP_013884.1 CDS clpX NC_002973.6 1274028 1275287 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1274028..1275287 Listeria monocytogenes serotype 4b str. F2365 2799300 YP_013885.1 CDS LMOf2365_1287 NC_002973.6 1275406 1275972 D identified by similarity to SP:P72365; match to protein family HMM PF00461; signal peptidase I 1275406..1275972 Listeria monocytogenes serotype 4b str. F2365 2799271 YP_013886.1 CDS LMOf2365_1288 NC_002973.6 1276007 1276576 D identified by similarity to SP:P72365; match to protein family HMM PF00461; signal peptidase I 1276007..1276576 Listeria monocytogenes serotype 4b str. F2365 2799098 YP_013887.1 CDS LMOf2365_1289 NC_002973.6 1276678 1277220 D identified by similarity to SP:P28628; match to protein family HMM PF00461; signal peptidase I 1276678..1277220 Listeria monocytogenes serotype 4b str. F2365 2799099 YP_013888.1 CDS rbgA NC_002973.6 1277230 1278093 D essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 1277230..1278093 Listeria monocytogenes serotype 4b str. F2365 2799032 YP_013889.1 CDS rnhB NC_002973.6 1278090 1278875 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1278090..1278875 Listeria monocytogenes serotype 4b str. F2365 2798454 YP_013890.1 CDS LMOf2365_1292 NC_002973.6 1279009 1279869 D identified by similarity to OMNI:NTL01LI1302; match to protein family HMM PF02481; match to protein family HMM TIGR00732; Smf family protein 1279009..1279869 Listeria monocytogenes serotype 4b str. F2365 2799046 YP_013891.1 CDS topA NC_002973.6 1280142 1282220 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1280142..1282220 Listeria monocytogenes serotype 4b str. F2365 2798307 YP_013892.1 CDS gid NC_002973.6 1282283 1283587 D TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 1282283..1283587 Listeria monocytogenes serotype 4b str. F2365 2798171 YP_013893.1 CDS xerC NC_002973.6 1283870 1284772 D identified by similarity to SP:P22885; match to protein family HMM PF00589; match to protein family HMM PF02899; integrase/recombinase XerC 1283870..1284772 Listeria monocytogenes serotype 4b str. F2365 2797611 YP_013894.1 CDS hslV NC_002973.6 1284793 1285332 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1284793..1285332 Listeria monocytogenes serotype 4b str. F2365 2797010 YP_013895.1 CDS hslU NC_002973.6 1285364 1286755 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1285364..1286755 Listeria monocytogenes serotype 4b str. F2365 2799557 YP_013896.1 CDS LMOf2365_1298 NC_002973.6 1286776 1287555 D CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; transcriptional repressor CodY 1286776..1287555 Listeria monocytogenes serotype 4b str. F2365 2798992 YP_013897.1 CDS LMOf2365_1299 NC_002973.6 1287658 1288077 D identified by match to protein family HMM PF03061; match to protein family HMM TIGR00051; 4-hydroxybenzoyl-CoA thioesterase 1287658..1288077 Listeria monocytogenes serotype 4b str. F2365 2798113 YP_013898.1 CDS LMOf2365_1300 NC_002973.6 1288100 1288411 D identified by similarity to OMNI:NTL01LI1310; hypothetical protein 1288100..1288411 Listeria monocytogenes serotype 4b str. F2365 2799470 YP_013899.1 CDS LMOf2365_1301 NC_002973.6 1288414 1289286 D identified by match to protein family HMM PF01263; aldose epimerase 1288414..1289286 Listeria monocytogenes serotype 4b str. F2365 2798109 YP_013900.1 CDS LMOf2365_1302 NC_002973.6 1289328 1289924 R identified by similarity to OMNI:NTL01LI1312; match to protein family HMM PF02660; match to protein family HMM TIGR00023; hypothetical protein complement(1289328..1289924) Listeria monocytogenes serotype 4b str. F2365 2797041 YP_013901.1 CDS LMOf2365_1303 NC_002973.6 1290082 1290489 D identified by similarity to OMNI:NTL01LM1277; match to protein family HMM PF02629; CoA-binding domain-containing protein 1290082..1290489 Listeria monocytogenes serotype 4b str. F2365 2797374 YP_013902.1 CDS parE NC_002973.6 1290670 1292637 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1290670..1292637 Listeria monocytogenes serotype 4b str. F2365 2798296 YP_013903.1 CDS parC NC_002973.6 1292634 1295093 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1292634..1295093 Listeria monocytogenes serotype 4b str. F2365 2798052 YP_013904.1 CDS luxS NC_002973.6 1295176 1295643 D catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 1295176..1295643 Listeria monocytogenes serotype 4b str. F2365 2798082 YP_013905.1 CDS LMOf2365_1307 NC_002973.6 1296271 1298097 D identified by match to protein family HMM PF00560; hypothetical protein 1296271..1298097 Listeria monocytogenes serotype 4b str. F2365 2799616 YP_013906.1 CDS LMOf2365_1308 NC_002973.6 1298130 1300016 R identified by match to protein family HMM PF01757; acyltransferase complement(1298130..1300016) Listeria monocytogenes serotype 4b str. F2365 2798275 YP_013907.1 CDS LMOf2365_1309 NC_002973.6 1300229 1300927 D identified by similarity to SP:P37965; match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase 1300229..1300927 Listeria monocytogenes serotype 4b str. F2365 2798912 YP_013908.1 CDS glpD NC_002973.6 1301160 1302836 D identified by similarity to SP:P18158; match to protein family HMM PF01266; glycerol-3-phosphate dehydrogenase 1301160..1302836 Listeria monocytogenes serotype 4b str. F2365 2798886 YP_013909.1 CDS miaA NC_002973.6 1302963 1303880 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1302963..1303880 Listeria monocytogenes serotype 4b str. F2365 2799437 YP_013910.1 CDS hfq NC_002973.6 1304002 1304235 D identified by match to protein family HMM PF01423; match to protein family HMM PF03329; hfq protein 1304002..1304235 Listeria monocytogenes serotype 4b str. F2365 2799755 YP_013911.1 CDS LMOf2365_1313 NC_002973.6 1304340 1305569 D GTP-binding domain-containing protein 1304340..1305569 Listeria monocytogenes serotype 4b str. F2365 2799151 YP_013912.1 CDS LMOf2365_1314 NC_002973.6 1305562 1306788 D hypothetical protein 1305562..1306788 Listeria monocytogenes serotype 4b str. F2365 2797424 YP_013913.1 CDS LMOf2365_1315 NC_002973.6 1306804 1306914 D hypothetical protein 1306804..1306914 Listeria monocytogenes serotype 4b str. F2365 2797115 YP_013914.1 CDS glnR NC_002973.6 1306990 1307358 D identified by similarity to SP:P37582; match to protein family HMM PF00376; GlnR family transcriptional regulator 1306990..1307358 Listeria monocytogenes serotype 4b str. F2365 2798561 YP_013915.1 CDS glnA NC_002973.6 1307429 1308763 D identified by similarity to SP:P12425; match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase, type I 1307429..1308763 Listeria monocytogenes serotype 4b str. F2365 2798633 YP_013916.1 CDS arsB NC_002973.6 1308907 1310202 D identified by similarity to SP:P30329; match to protein family HMM PF02040; match to protein family HMM TIGR00935; arsenical pump membrane protein 1308907..1310202 Listeria monocytogenes serotype 4b str. F2365 2798235 YP_013917.1 CDS LMOf2365_1319 NC_002973.6 1310236 1310760 R identified by match to protein family HMM PF00583; acetyltransferase complement(1310236..1310760) Listeria monocytogenes serotype 4b str. F2365 2797656 YP_013918.1 CDS lexA NC_002973.6 1310791 1311405 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(1310791..1311405) Listeria monocytogenes serotype 4b str. F2365 2799718 YP_013919.1 CDS LMOf2365_1321 NC_002973.6 1311562 1311891 D identified by similarity to OMNI:NTL01LI1330; cell division suppressor protein YneA 1311562..1311891 Listeria monocytogenes serotype 4b str. F2365 2799686 YP_013920.1 CDS LMOf2365_1322 NC_002973.6 1311985 1312212 D identified by similarity to OMNI:NTL01LI1331; match to protein family HMM PF05979; hypothetical protein 1311985..1312212 Listeria monocytogenes serotype 4b str. F2365 2799085 YP_013921.1 CDS tkt-2 NC_002973.6 1312359 1314353 D identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; transketolase 1312359..1314353 Listeria monocytogenes serotype 4b str. F2365 2799901 YP_013922.1 CDS LMOf2365_1324 NC_002973.6 1314574 1314813 D identified by similarity to SP:P45708; match to protein family HMM PF03672; hypothetical protein 1314574..1314813 Listeria monocytogenes serotype 4b str. F2365 2799648 YP_013923.1 CDS LMOf2365_1325 NC_002973.6 1314862 1315593 R identified by similarity to GP:16413818; hypothetical protein complement(1314862..1315593) Listeria monocytogenes serotype 4b str. F2365 2797635 YP_013924.1 CDS LMOf2365_1326 NC_002973.6 1315615 1316121 R identified by match to protein family HMM PF02195; ParB-like nuclease domain-containing protein complement(1315615..1316121) Listeria monocytogenes serotype 4b str. F2365 2798055 YP_013925.1 CDS LMOf2365_1327 NC_002973.6 1316131 1317435 R hypothetical protein complement(1316131..1317435) Listeria monocytogenes serotype 4b str. F2365 2799419 YP_013926.1 CDS LMOf2365_1328 NC_002973.6 1317425 1318624 R identified by match to protein family HMM PF00176; SNF2 family protein complement(1317425..1318624) Listeria monocytogenes serotype 4b str. F2365 2797365 YP_013927.1 CDS LMOf2365_1329 NC_002973.6 1318608 1318982 R identified by similarity to OMNI:NTL01LI1338; hypothetical protein complement(1318608..1318982) Listeria monocytogenes serotype 4b str. F2365 2797962 YP_013928.1 CDS pyrH NC_002973.6 1319275 1320003 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1319275..1320003 Listeria monocytogenes serotype 4b str. F2365 2799009 YP_013929.1 CDS frr NC_002973.6 1320003 1320560 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1320003..1320560 Listeria monocytogenes serotype 4b str. F2365 2798047 YP_013930.1 CDS uppS NC_002973.6 1320791 1321549 D catalyzes the formation of UDP pyrophosphate from isopentenyl pyrophosphate; UDP pyrophosphate synthase 1320791..1321549 Listeria monocytogenes serotype 4b str. F2365 2798063 YP_013931.1 CDS cdsA NC_002973.6 1321563 1322351 D identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase 1321563..1322351 Listeria monocytogenes serotype 4b str. F2365 2798958 YP_013932.1 CDS dxr NC_002973.6 1322366 1323508 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1322366..1323508 Listeria monocytogenes serotype 4b str. F2365 2799916 YP_013933.1 CDS LMOf2365_1335 NC_002973.6 1323522 1324784 D identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054; membrane-associated zinc metalloprotease 1323522..1324784 Listeria monocytogenes serotype 4b str. F2365 2799525 YP_013934.1 CDS proS NC_002973.6 1324825 1326531 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1324825..1326531 Listeria monocytogenes serotype 4b str. F2365 2799246 YP_013935.1 CDS polC NC_002973.6 1326637 1330971 D catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; DNA polymerase III PolC 1326637..1330971 Listeria monocytogenes serotype 4b str. F2365 2798788 YP_013936.1 CDS LMOf2365_1338 NC_002973.6 1331153 1331620 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1331153..1331620 Listeria monocytogenes serotype 4b str. F2365 2797035 YP_013937.1 CDS nusA NC_002973.6 1331650 1332768 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1331650..1332768 Listeria monocytogenes serotype 4b str. F2365 2796996 YP_013938.1 CDS LMOf2365_1340 NC_002973.6 1332783 1333067 D identified by similarity to SP:P32728; match to protein family HMM PF04296; hypothetical protein 1332783..1333067 Listeria monocytogenes serotype 4b str. F2365 2798606 YP_013939.1 CDS LMOf2365_1341 NC_002973.6 1333060 1333359 D identified by match to protein family HMM PF01248; ribosomal protein L7A family protein 1333060..1333359 Listeria monocytogenes serotype 4b str. F2365 2798199 YP_013940.1 CDS infB NC_002973.6 1333382 1335730 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1333382..1335730 Listeria monocytogenes serotype 4b str. F2365 2799779 YP_013941.1 CDS LMOf2365_1343 NC_002973.6 1335727 1336005 D identified by similarity to SP:P32730; match to protein family HMM PF04456; hypothetical protein 1335727..1336005 Listeria monocytogenes serotype 4b str. F2365 2799752 YP_013942.1 CDS rbfA NC_002973.6 1336022 1336366 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1336022..1336366 Listeria monocytogenes serotype 4b str. F2365 2799679 YP_013943.1 CDS truB NC_002973.6 1336462 1337376 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1336462..1337376 Listeria monocytogenes serotype 4b str. F2365 2799762 YP_013944.1 CDS ribF NC_002973.6 1337446 1338390 D identified by match to protein family HMM PF01687; match to protein family HMM TIGR00083; match to protein family HMM TIGR00125; riboflavin biosynthesis protein RibF 1337446..1338390 Listeria monocytogenes serotype 4b str. F2365 2797176 YP_013945.1 CDS rpsO NC_002973.6 1338527 1338796 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1338527..1338796 Listeria monocytogenes serotype 4b str. F2365 2797499 YP_013946.1 CDS pnp NC_002973.6 1339044 1341215 D identified by similarity to SP:P50849; match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; polynucleotide phosphorylase/polyadenylase 1339044..1341215 Listeria monocytogenes serotype 4b str. F2365 2799634 YP_013947.1 CDS LMOf2365_1349 NC_002973.6 1341254 1342294 R identified by similarity to OMNI:NTL01LI1358; match to protein family HMM PF03193; match to protein family HMM TIGR00157; hypothetical protein complement(1341254..1342294) Listeria monocytogenes serotype 4b str. F2365 2797683 YP_013948.1 CDS LMOf2365_1350 NC_002973.6 1342457 1342918 R identified by similarity to GP:16413843; hypothetical protein complement(1342457..1342918) Listeria monocytogenes serotype 4b str. F2365 2799529 YP_013949.1 CDS LMOf2365_1351 NC_002973.6 1342964 1343320 R hypothetical protein complement(1342964..1343320) Listeria monocytogenes serotype 4b str. F2365 2799499 YP_013950.2 CDS rpmG NC_002973.6 1343518 1343667 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1343518..1343667 Listeria monocytogenes serotype 4b str. F2365 2799656 YP_013951.1 CDS LMOf2365_1353 NC_002973.6 1343723 1344262 D identified by match to protein family HMM PF01812; 5-formyltetrahydrofolate cyclo-ligase 1343723..1344262 Listeria monocytogenes serotype 4b str. F2365 2797654 YP_013952.1 CDS LMOf2365_1354 NC_002973.6 1344343 1345899 D identified by match to protein family HMM PF01694; rhomboid family protein 1344343..1345899 Listeria monocytogenes serotype 4b str. F2365 2798072 YP_013953.1 CDS LMOf2365_1355 NC_002973.6 1345912 1346124 D identified by similarity to GP:16410754; match to protein family HMM PF06014; hypothetical protein 1345912..1346124 Listeria monocytogenes serotype 4b str. F2365 2798997 YP_013954.1 CDS glcK NC_002973.6 1346149 1347117 D identified by similarity to SP:P54495; match to protein family HMM PF00480; match to protein family HMM TIGR00744; glucokinase 1346149..1347117 Listeria monocytogenes serotype 4b str. F2365 2797963 YP_013955.1 CDS LMOf2365_1357 NC_002973.6 1347263 1348354 D lipoprotein 1347263..1348354 Listeria monocytogenes serotype 4b str. F2365 2798952 YP_013956.1 CDS LMOf2365_1358 NC_002973.6 1348372 1348689 R identified by similarity to OMNI:NTL01LI1367; hypothetical protein complement(1348372..1348689) Listeria monocytogenes serotype 4b str. F2365 2799561 YP_013957.1 CDS LMOf2365_1359 NC_002973.6 1348686 1349153 R identified by similarity to PIR:AB1605; hypothetical protein complement(1348686..1349153) Listeria monocytogenes serotype 4b str. F2365 2799435 YP_013958.1 CDS LMOf2365_1360 NC_002973.6 1349116 1349400 R identified by similarity to GP:16413853; ATP-binding protein complement(1349116..1349400) Listeria monocytogenes serotype 4b str. F2365 2797046 YP_013959.1 CDS LMOf2365_1361 NC_002973.6 1349393 1349815 R identified by similarity to OMNI:NTL01LI1370; hypothetical protein complement(1349393..1349815) Listeria monocytogenes serotype 4b str. F2365 2797808 YP_013960.1 CDS LMOf2365_1362 NC_002973.6 1349812 1350135 R identified by similarity to SP:P25955; general secretion pathway protein G complement(1349812..1350135) Listeria monocytogenes serotype 4b str. F2365 2799721 YP_013961.1 CDS LMOf2365_1363 NC_002973.6 1350150 1351181 R identified by similarity to OMNI:NTL01LI1372; match to protein family HMM PF00482; general secretion pathway protein F complement(1350150..1351181) Listeria monocytogenes serotype 4b str. F2365 2798374 YP_013962.1 CDS LMOf2365_1364 NC_002973.6 1351159 1352181 R identified by similarity to SP:P25953; match to protein family HMM PF00437; general secretion pathway protein E complement(1351159..1352181) Listeria monocytogenes serotype 4b str. F2365 2799654 YP_013963.1 CDS gcvT NC_002973.6 1352720 1353808 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 1352720..1353808 Listeria monocytogenes serotype 4b str. F2365 2799805 YP_013964.1 CDS gcvP1 NC_002973.6 1353824 1355170 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 1353824..1355170 Listeria monocytogenes serotype 4b str. F2365 2799829 YP_013965.1 CDS gcvP2 NC_002973.6 1355185 1356633 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 1355185..1356633 Listeria monocytogenes serotype 4b str. F2365 2799770 YP_013966.1 CDS LMOf2365_1368 NC_002973.6 1356672 1357052 R identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein complement(1356672..1357052) Listeria monocytogenes serotype 4b str. F2365 2799788 YP_013967.1 CDS LMOf2365_1369 NC_002973.6 1357114 1357386 R identified by similarity to GP:16413862; hypothetical protein complement(1357114..1357386) Listeria monocytogenes serotype 4b str. F2365 2799822 YP_013968.1 CDS LMOf2365_1370 NC_002973.6 1357399 1358364 R identified by similarity to SP:P54515; hypothetical protein complement(1357399..1358364) Listeria monocytogenes serotype 4b str. F2365 2799813 YP_013969.1 CDS LMOf2365_1371 NC_002973.6 1358544 1359605 D identified by match to protein family HMM PF00557; M24 family peptidase 1358544..1359605 Listeria monocytogenes serotype 4b str. F2365 2797000 YP_013970.1 CDS efp NC_002973.6 1359708 1360265 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1359708..1360265 Listeria monocytogenes serotype 4b str. F2365 2799808 YP_013971.1 CDS accB NC_002973.6 1360424 1360903 D identified by match to protein family HMM PF00364; match to protein family HMM TIGR00531; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1360424..1360903 Listeria monocytogenes serotype 4b str. F2365 2797028 YP_013972.1 CDS accC NC_002973.6 1360917 1362281 D an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 1360917..1362281 Listeria monocytogenes serotype 4b str. F2365 2797052 YP_013973.1 CDS LMOf2365_1375 NC_002973.6 1362285 1362692 D identified by similarity to SP:P54519; match to protein family HMM PF03780; hypothetical protein 1362285..1362692 Listeria monocytogenes serotype 4b str. F2365 2797197 YP_013974.1 CDS nusB NC_002973.6 1362723 1363109 D Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1362723..1363109 Listeria monocytogenes serotype 4b str. F2365 2797756 YP_013975.1 CDS folD NC_002973.6 1363206 1364060 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1363206..1364060 Listeria monocytogenes serotype 4b str. F2365 2799726 YP_013976.1 CDS xseA NC_002973.6 1364079 1365431 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1364079..1365431 Listeria monocytogenes serotype 4b str. F2365 2799241 YP_013977.1 CDS xseB NC_002973.6 1365421 1365648 D catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 1365421..1365648 Listeria monocytogenes serotype 4b str. F2365 2799636 YP_013978.1 CDS LMOf2365_1380 NC_002973.6 1365651 1366532 D identified by similarity to SP:Q08291; match to protein family HMM PF00348; geranyltranstransferase 1365651..1366532 Listeria monocytogenes serotype 4b str. F2365 2797247 YP_013979.1 CDS LMOf2365_1381 NC_002973.6 1366731 1366931 D identified by match to protein family HMM PF00313; cold-shock domain-contain protein 1366731..1366931 Listeria monocytogenes serotype 4b str. F2365 2799704 YP_013980.1 CDS dxs NC_002973.6 1367098 1368927 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1367098..1368927 Listeria monocytogenes serotype 4b str. F2365 2797021 YP_013981.1 CDS LMOf2365_1383 NC_002973.6 1368924 1369748 D identified by similarity to SP:Q06803; match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478; hemolysin A 1368924..1369748 Listeria monocytogenes serotype 4b str. F2365 2799664 YP_013982.1 CDS argR NC_002973.6 1369939 1370388 D regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 1369939..1370388 Listeria monocytogenes serotype 4b str. F2365 2799896 YP_013983.1 CDS recN NC_002973.6 1370411 1372102 D identified by similarity to SP:P17894; match to protein family HMM TIGR00634; DNA repair protein RecN 1370411..1372102 Listeria monocytogenes serotype 4b str. F2365 2798873 YP_013984.1 CDS LMOf2365_1386 NC_002973.6 1372232 1373098 D identified by match to protein family HMM PF01515; phosphate acetyl/butyryltransferase 1372232..1373098 Listeria monocytogenes serotype 4b str. F2365 2797040 YP_013985.1 CDS LMOf2365_1387 NC_002973.6 1373235 1374302 D catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase 1373235..1374302 Listeria monocytogenes serotype 4b str. F2365 2799405 YP_013986.1 CDS LMOf2365_1388 NC_002973.6 1374317 1375744 D E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1374317..1375744 Listeria monocytogenes serotype 4b str. F2365 2797389 YP_013987.1 CDS LMOf2365_1389 NC_002973.6 1375769 1376764 D identified by similarity to SP:P37940; match to protein family HMM PF00676; 2-oxoisovalerate dehydrogenase E1 component subunit alpha 1375769..1376764 Listeria monocytogenes serotype 4b str. F2365 2798891 YP_013988.1 CDS LMOf2365_1390 NC_002973.6 1376781 1377764 D identified by similarity to SP:P37941; match to protein family HMM PF02779; match to protein family HMM PF02780; 2-oxoisovalerate dehydrogenase E1 subunit beta 1376781..1377764 Listeria monocytogenes serotype 4b str. F2365 2798879 YP_013989.1 CDS LMOf2365_1391 NC_002973.6 1377795 1379045 D identified by similarity to SP:P37942; match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase 1377795..1379045 Listeria monocytogenes serotype 4b str. F2365 2798684 YP_013990.1 CDS LMOf2365_1392 NC_002973.6 1379201 1379317 R hypothetical protein complement(1379201..1379317) Listeria monocytogenes serotype 4b str. F2365 2797102 YP_013991.1 CDS LMOf2365_1393 NC_002973.6 1379419 1380510 D identified by match to protein family HMM PF01546; match to protein family HMM TIGR01883; M20/M25/M40 family peptidase 1379419..1380510 Listeria monocytogenes serotype 4b str. F2365 2798789 YP_013992.1 CDS LMOf2365_1394 NC_002973.6 1380510 1380629 D hypothetical protein 1380510..1380629 Listeria monocytogenes serotype 4b str. F2365 2798802 YP_013993.1 CDS gnd NC_002973.6 1380655 1382073 D catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1380655..1382073 Listeria monocytogenes serotype 4b str. F2365 2799329 YP_013994.1 CDS LMOf2365_1396 NC_002973.6 1382264 1382944 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1382264..1382944 Listeria monocytogenes serotype 4b str. F2365 2798761 YP_013995.1 CDS LMOf2365_1397 NC_002973.6 1382941 1384392 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1382941..1384392 Listeria monocytogenes serotype 4b str. F2365 2799310 YP_013996.1 CDS LMOf2365_1398 NC_002973.6 1384429 1385256 R involved in biogenesis of membrane proteins; Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site; OxaA-like protein precursor complement(1384429..1385256) Listeria monocytogenes serotype 4b str. F2365 2798809 YP_013997.1 CDS LMOf2365_1399 NC_002973.6 1385293 1385574 R identified by similarity to OMNI:NTL01LI1406; hypothetical protein complement(1385293..1385574) Listeria monocytogenes serotype 4b str. F2365 2799545 YP_013998.1 CDS LMOf2365_1400 NC_002973.6 1385660 1385941 R catalyzes the hydrolysis of acylphosphate; acylphosphatase complement(1385660..1385941) Listeria monocytogenes serotype 4b str. F2365 2798704 YP_013999.1 CDS LMOf2365_1401 NC_002973.6 1386081 1386428 D identified by similarity to OMNI:SA1438; hypothetical protein 1386081..1386428 Listeria monocytogenes serotype 4b str. F2365 2799077 YP_014000.1 CDS fni NC_002973.6 1386457 1387533 D catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase 1386457..1387533 Listeria monocytogenes serotype 4b str. F2365 2798671 YP_014001.1 CDS LMOf2365_1403 NC_002973.6 1387573 1388532 R identified by match to protein family HMM PF00581; hypothetical protein complement(1387573..1388532) Listeria monocytogenes serotype 4b str. F2365 2798730 YP_014002.1 CDS LMOf2365_1404 NC_002973.6 1388813 1389709 D identified by match to protein family HMM PF02588; hypothetical protein 1388813..1389709 Listeria monocytogenes serotype 4b str. F2365 2798755 YP_014003.1 CDS LMOf2365_1405 NC_002973.6 1389860 1392133 D identified by similarity to SP:P21458; match to protein family HMM PF01580; FtsK/SpoIIIE family protein 1389860..1392133 Listeria monocytogenes serotype 4b str. F2365 2799732 YP_014004.1 CDS LMOf2365_1406 NC_002973.6 1392167 1393006 R catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase complement(1392167..1393006) Listeria monocytogenes serotype 4b str. F2365 2797692 YP_014005.1 CDS LMOf2365_1407 NC_002973.6 1393359 1394432 D identified by similarity to SP:Q48754; match to protein family HMM PF02608; surface antigen 1393359..1394432 Listeria monocytogenes serotype 4b str. F2365 2798738 YP_014006.1 CDS LMOf2365_1408 NC_002973.6 1394864 1396405 D ABC transporter ATP-binding protein 1394864..1396405 Listeria monocytogenes serotype 4b str. F2365 2799201 YP_014007.1 CDS LMOf2365_1409 NC_002973.6 1396398 1397450 D identified by match to protein family HMM PF02653; ABC transporter permease 1396398..1397450 Listeria monocytogenes serotype 4b str. F2365 2798383 YP_014008.1 CDS LMOf2365_1410 NC_002973.6 1397447 1398397 D identified by match to protein family HMM PF02653; ABC transporter permease 1397447..1398397 Listeria monocytogenes serotype 4b str. F2365 2798713 YP_014009.1 CDS LMOf2365_1411 NC_002973.6 1398514 1399806 D identified by similarity to OMNI:NTL01BH2396; match to protein family HMM PF05193; hypothetical protein 1398514..1399806 Listeria monocytogenes serotype 4b str. F2365 2798280 YP_014010.1 CDS LMOf2365_1412 NC_002973.6 1399787 1401073 D identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase 1399787..1401073 Listeria monocytogenes serotype 4b str. F2365 2798690 YP_014011.1 CDS LMOf2365_1413 NC_002973.6 1401165 1401896 D identified by similarity to SP:P51831; match to protein family HMM PF00106; 3-ketoacyl-ACP reductase 1401165..1401896 Listeria monocytogenes serotype 4b str. F2365 2799304 YP_014012.1 CDS LMOf2365_1414 NC_002973.6 1401947 1402876 D hypothetical protein 1401947..1402876 Listeria monocytogenes serotype 4b str. F2365 2798365 YP_014013.1 CDS pgsA NC_002973.6 1402967 1403545 D identified by similarity to SP:P46322; match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1402967..1403545 Listeria monocytogenes serotype 4b str. F2365 2797801 YP_014014.1 CDS LMOf2365_1416 NC_002973.6 1403613 1404857 D identified by similarity to SP:P46323; match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; competence damage-inducible protein A 1403613..1404857 Listeria monocytogenes serotype 4b str. F2365 2798750 YP_014015.1 CDS recA NC_002973.6 1405130 1406176 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1405130..1406176 Listeria monocytogenes serotype 4b str. F2365 2798782 YP_014016.1 CDS LMOf2365_1418 NC_002973.6 1406477 1408039 D protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1406477..1408039 Listeria monocytogenes serotype 4b str. F2365 2799595 YP_014017.1 CDS LMOf2365_1419 NC_002973.6 1408178 1408651 D identified by match to protein family HMM PF00583; acetyltransferase 1408178..1408651 Listeria monocytogenes serotype 4b str. F2365 2799607 YP_014018.1 CDS LMOf2365_1420 NC_002973.6 1408657 1409460 D identified by similarity to OMNI:NTL01LI1427; match to protein family HMM PF00149; match to protein family HMM TIGR00282; hypothetical protein 1408657..1409460 Listeria monocytogenes serotype 4b str. F2365 2799613 YP_014019.1 CDS LMOf2365_1421 NC_002973.6 1409477 1409839 D identified by similarity to GP:16413912; hypothetical protein 1409477..1409839 Listeria monocytogenes serotype 4b str. F2365 2797782 YP_014020.1 CDS mutS-2 NC_002973.6 1409950 1412532 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1409950..1412532 Listeria monocytogenes serotype 4b str. F2365 2798745 YP_014021.1 CDS mutL NC_002973.6 1412552 1414363 D This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 1412552..1414363 Listeria monocytogenes serotype 4b str. F2365 2799603 YP_014022.1 CDS glpP NC_002973.6 1414380 1414928 D identified by similarity to SP:P30300; match to protein family HMM PF04309; glycerol uptake operon antiterminator regulatory protein 1414380..1414928 Listeria monocytogenes serotype 4b str. F2365 2799194 YP_014023.1 CDS pfl-1 NC_002973.6 1415354 1417585 D identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255; formate acetyltransferase 1415354..1417585 Listeria monocytogenes serotype 4b str. F2365 2798776 YP_014024.1 CDS pflA NC_002973.6 1417662 1418408 D identified by similarity to SP:P09374; match to protein family HMM PF04055; pyruvate formate-lyase activating enzyme 1417662..1418408 Listeria monocytogenes serotype 4b str. F2365 2798698 YP_014025.1 CDS LMOf2365_1427 NC_002973.6 1418442 1418972 R identified by match to protein family HMM PF03551; PadR family transcriptional regulator complement(1418442..1418972) Listeria monocytogenes serotype 4b str. F2365 2798326 YP_014026.1 CDS LMOf2365_1428 NC_002973.6 1419157 1420332 D identified by match to protein family HMM PF00083; major facilitator family transporter 1419157..1420332 Listeria monocytogenes serotype 4b str. F2365 2797819 YP_014027.1 CDS LMOf2365_1429 NC_002973.6 1420467 1421015 D identified by similarity to OMNI:NTL01LI1436; hypothetical protein 1420467..1421015 Listeria monocytogenes serotype 4b str. F2365 2797650 YP_014028.1 CDS LMOf2365_1430 NC_002973.6 1421032 1421259 D identified by match to protein family HMM PF01381; DNA-binding protein 1421032..1421259 Listeria monocytogenes serotype 4b str. F2365 2798677 YP_014029.1 CDS flaR NC_002973.6 1421299 1421832 D identified by similarity to OMNI:NTL01LM1404; DNA topology modulation protein FlaR 1421299..1421832 Listeria monocytogenes serotype 4b str. F2365 2798357 YP_014030.1 CDS LMOf2365_1432 NC_002973.6 1422067 1423389 R identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein complement(1422067..1423389) Listeria monocytogenes serotype 4b str. F2365 2798699 YP_014031.1 CDS LMOf2365_1433 NC_002973.6 1423576 1424745 R identified by similarity to SP:P45359; match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; acetyl-CoA acetyltransferase complement(1423576..1424745) Listeria monocytogenes serotype 4b str. F2365 2798725 YP_014032.1 CDS mvaS NC_002973.6 1424895 1426061 D identified by similarity to GP:9937383; match to protein family HMM PF01154; match to protein family HMM TIGR01835; hydroxymethylglutaryl-CoA synthase 1424895..1426061 Listeria monocytogenes serotype 4b str. F2365 2798767 YP_014033.1 CDS LMOf2365_1435 NC_002973.6 1426084 1426683 R transporter complement(1426084..1426683) Listeria monocytogenes serotype 4b str. F2365 2799050 YP_014034.1 CDS LMOf2365_1436 NC_002973.6 1426753 1427997 R identified by similarity to GP:17982120; transporter complement(1426753..1427997) Listeria monocytogenes serotype 4b str. F2365 2798695 YP_014035.1 CDS LMOf2365_1437 NC_002973.6 1428016 1429284 R identified by match to protein family HMM PF01663; type I phosphodiesterase/nucleotide pyrophosphatase complement(1428016..1429284) Listeria monocytogenes serotype 4b str. F2365 2798796 YP_014036.1 CDS LMOf2365_1438 NC_002973.6 1429348 1430385 R identified by match to protein family HMM PF01594; hypothetical protein complement(1429348..1430385) Listeria monocytogenes serotype 4b str. F2365 2799315 YP_014037.1 CDS murB NC_002973.6 1430402 1431298 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(1430402..1431298) Listeria monocytogenes serotype 4b str. F2365 2799516 YP_014038.1 CDS LMOf2365_1440 NC_002973.6 1431514 1432500 D identified by similarity to SP:O34992; match to protein family HMM PF00005; match to protein family HMM TIGR01186; glycine betaine/L-proline ABC transporter ATP-binding protein 1431514..1432500 Listeria monocytogenes serotype 4b str. F2365 2799422 YP_014039.1 CDS LMOf2365_1441 NC_002973.6 1432497 1434011 D identified by similarity to SP:O32243; match to protein family HMM PF00528; match to protein family HMM PF04069; glycine betaine/proline ABC transporter permease/substrate-binding protein 1432497..1434011 Listeria monocytogenes serotype 4b str. F2365 2798918 YP_014040.1 CDS LMOf2365_1442 NC_002973.6 1434047 1434877 R identified by similarity to OMNI:NTL01LI1451; hypothetical protein complement(1434047..1434877) Listeria monocytogenes serotype 4b str. F2365 2797421 YP_014041.1 CDS LMOf2365_1443 NC_002973.6 1435016 1436362 R identified by match to protein family HMM PF01566; match to protein family HMM TIGR01197; manganese transport protein MntH complement(1435016..1436362) Listeria monocytogenes serotype 4b str. F2365 2798058 YP_014042.1 CDS opuCD NC_002973.6 1436475 1437146 R identified by similarity to SP:O34742; match to protein family HMM PF00528; glycine betaine/L-proline ABC transporter permease complement(1436475..1437146) Listeria monocytogenes serotype 4b str. F2365 2797366 YP_014043.1 CDS opuCC NC_002973.6 1437161 1438087 R identified by similarity to SP:O32243; match to protein family HMM PF04069; glycine betaine/L-proline ABC transporter substrate-binding protein complement(1437161..1438087) Listeria monocytogenes serotype 4b str. F2365 2799451 YP_014044.1 CDS opuCB NC_002973.6 1438089 1438745 R identified by similarity to GP:12003349; match to protein family HMM PF00528; glycine betaine/L-proline ABC transporter permease complement(1438089..1438745) Listeria monocytogenes serotype 4b str. F2365 2799614 YP_014045.1 CDS opuCA NC_002973.6 1438749 1439942 R identified by similarity to SP:O34992; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186; glycine betaine/L-proline ABC transporter ATP-binding protein complement(1438749..1439942) Listeria monocytogenes serotype 4b str. F2365 2798984 YP_014046.1 CDS LMOf2365_1448 NC_002973.6 1440235 1440795 R hypothetical protein complement(1440235..1440795) Listeria monocytogenes serotype 4b str. F2365 2799044 YP_014047.1 CDS LMOf2365_1449 NC_002973.6 1441043 1441426 R identified by similarity to GP:16501831; match to protein family HMM PF04237; hypothetical protein complement(1441043..1441426) Listeria monocytogenes serotype 4b str. F2365 2798200 YP_014048.1 CDS LMOf2365_1450 NC_002973.6 1441566 1443167 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1441566..1443167 Listeria monocytogenes serotype 4b str. F2365 2799708 YP_014049.1 CDS LMOf2365_1451 NC_002973.6 1443206 1443856 R identified by similarity to OMNI:NTL01LI1460; hypothetical protein complement(1443206..1443856) Listeria monocytogenes serotype 4b str. F2365 2798369 YP_014050.1 CDS LMOf2365_1452 NC_002973.6 1443909 1445249 R identified by match to protein family HMM PF00070; match to protein family HMM PF02852; pyridine nucleotide-disulfide oxidoreductase complement(1443909..1445249) Listeria monocytogenes serotype 4b str. F2365 2799025 YP_014051.1 CDS LMOf2365_1453 NC_002973.6 1445338 1447005 R identified by similarity to OMNI:NTL01LI1462; match to protein family HMM PF00753; match to protein family HMM TIGR00649; metallo-beta-lactamase complement(1445338..1447005) Listeria monocytogenes serotype 4b str. F2365 2799743 YP_014052.1 CDS dapA NC_002973.6 1447025 1447906 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(1447025..1447906) Listeria monocytogenes serotype 4b str. F2365 2799279 YP_014053.1 CDS LMOf2365_1455 NC_002973.6 1447921 1449132 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive; aspartate kinase I complement(1447921..1449132) Listeria monocytogenes serotype 4b str. F2365 2799740 YP_014054.1 CDS asd NC_002973.6 1449144 1450187 R identified by similarity to SP:Q04797; match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01296; aspartate-semialdehyde dehydrogenase complement(1449144..1450187) Listeria monocytogenes serotype 4b str. F2365 2798644 YP_014055.1 CDS LMOf2365_1457 NC_002973.6 1450385 1452550 R identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein complement(1450385..1452550) Listeria monocytogenes serotype 4b str. F2365 2799245 YP_014056.1 CDS sod NC_002973.6 1452680 1453288 R identified by similarity to SP:P28764; match to protein family HMM PF00081; match to protein family HMM PF02777; superoxide dismutase complement(1452680..1453288) Listeria monocytogenes serotype 4b str. F2365 2799594 YP_014057.1 CDS LMOf2365_1459 NC_002973.6 1453590 1454390 D hypothetical protein 1453590..1454390 Listeria monocytogenes serotype 4b str. F2365 2799298 YP_014058.1 CDS ispG NC_002973.6 1454502 1455608 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1454502..1455608 Listeria monocytogenes serotype 4b str. F2365 2799072 YP_014059.1 CDS LMOf2365_1461 NC_002973.6 1455644 1456351 D identified by match to protein family HMM PF03591; AzlC family protein 1455644..1456351 Listeria monocytogenes serotype 4b str. F2365 2797055 YP_014060.1 CDS LMOf2365_1462 NC_002973.6 1456342 1456668 D identified by similarity to OMNI:NTL01LI1470; match to protein family HMM PF06063; hypothetical protein 1456342..1456668 Listeria monocytogenes serotype 4b str. F2365 2797959 YP_014061.1 CDS prsA-1 NC_002973.6 1456750 1457634 R identified by similarity to SP:P24327; match to protein family HMM PF00639; protein export protein complement(1456750..1457634) Listeria monocytogenes serotype 4b str. F2365 2798683 YP_014062.1 CDS zurR NC_002973.6 1457769 1458194 R identified by similarity to SP:Q9XDA4; match to protein family HMM PF01475; ZurR family transcriptional regulator complement(1457769..1458194) Listeria monocytogenes serotype 4b str. F2365 2797233 YP_014063.1 CDS zurM-2 NC_002973.6 1458175 1459062 R identified by similarity to GP:5019735; match to protein family HMM PF00950; zinc ABC transporter permease complement(1458175..1459062) Listeria monocytogenes serotype 4b str. F2365 2797451 YP_014064.1 CDS zurA-2 NC_002973.6 1459028 1459801 R identified by similarity to SP:Q9XDA6; match to protein family HMM PF00005; zinc ABC transporter ATP-binding protein complement(1459028..1459801) Listeria monocytogenes serotype 4b str. F2365 2798490 YP_014065.1 CDS ppaC NC_002973.6 1459946 1460872 R catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase complement(1459946..1460872) Listeria monocytogenes serotype 4b str. F2365 2798347 YP_014066.1 CDS nfo NC_002973.6 1460889 1461782 R Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV complement(1460889..1461782) Listeria monocytogenes serotype 4b str. F2365 2799083 YP_014067.1 CDS LMOf2365_1469 NC_002973.6 1461798 1463105 R identified by similarity to SP:P42305; match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent RNA helicase complement(1461798..1463105) Listeria monocytogenes serotype 4b str. F2365 2799101 YP_014068.1 CDS ispH NC_002973.6 1463251 1464246 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1463251..1464246 Listeria monocytogenes serotype 4b str. F2365 2799764 YP_014069.1 CDS LMOf2365_1471 NC_002973.6 1464292 1465413 R identified by similarity to SP:Q92BQ8; match to protein family HMM PF01784; match to protein family HMM TIGR00486; hypothetical protein complement(1464292..1465413) Listeria monocytogenes serotype 4b str. F2365 2799252 YP_014070.1 CDS LMOf2365_1472 NC_002973.6 1465410 1466132 R identified by similarity to OMNI:EF1380; match to protein family HMM PF04816; hypothetical protein complement(1465410..1466132) Listeria monocytogenes serotype 4b str. F2365 2797931 YP_014071.1 CDS rpoD NC_002973.6 1466182 1467306 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD complement(1466182..1467306) Listeria monocytogenes serotype 4b str. F2365 2799033 YP_014072.1 CDS dnaG NC_002973.6 1467401 1469281 R identified by similarity to SP:P47762; match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM TIGR01391; DNA primase complement(1467401..1469281) Listeria monocytogenes serotype 4b str. F2365 2798991 YP_014073.1 CDS LMOf2365_1475 NC_002973.6 1469301 1469741 R identified by similarity to OMNI:NTL01LI1482; match to protein family HMM PF02639; hypothetical protein complement(1469301..1469741) Listeria monocytogenes serotype 4b str. F2365 2799433 YP_014074.1 CDS LMOf2365_1476 NC_002973.6 1469929 1470753 R identified by match to protein family HMM PF03618; hypothetical protein complement(1469929..1470753) Listeria monocytogenes serotype 4b str. F2365 2798100 YP_014075.1 CDS glyS NC_002973.6 1470788 1472854 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(1470788..1472854) Listeria monocytogenes serotype 4b str. F2365 2798114 YP_014076.1 CDS glyQ NC_002973.6 1472847 1473737 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(1472847..1473737) Listeria monocytogenes serotype 4b str. F2365 2798078 YP_014077.1 CDS recO NC_002973.6 1474020 1474787 R involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO complement(1474020..1474787) Listeria monocytogenes serotype 4b str. F2365 2799412 YP_014078.1 CDS LMOf2365_1480 NC_002973.6 1474833 1475552 D identified by similarity to OMNI:NTL01LI1487; hypothetical protein 1474833..1475552 Listeria monocytogenes serotype 4b str. F2365 2798975 YP_014079.1 CDS era NC_002973.6 1475599 1476504 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(1475599..1476504) Listeria monocytogenes serotype 4b str. F2365 2797372 YP_014080.1 CDS cdd NC_002973.6 1476501 1476896 R identified by match to protein family HMM PF00383; match to protein family HMM TIGR01354; cytidine deaminase complement(1476501..1476896) Listeria monocytogenes serotype 4b str. F2365 2799010 YP_014081.1 CDS dgkA NC_002973.6 1476921 1477316 R identified by similarity to SP:Q05888; match to protein family HMM PF01219; diacylglycerol kinase complement(1476921..1477316) Listeria monocytogenes serotype 4b str. F2365 2797380 YP_014082.1 CDS LMOf2365_1484 NC_002973.6 1477294 1477779 R identified by similarity to OMNI:NTL01LI1491; match to protein family HMM PF02130; match to protein family HMM TIGR00043; metalloprotease complement(1477294..1477779) Listeria monocytogenes serotype 4b str. F2365 2799410 YP_014083.1 CDS LMOf2365_1485 NC_002973.6 1477796 1479952 R identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; HDIG domain-containing protein complement(1477796..1479952) Listeria monocytogenes serotype 4b str. F2365 2798728 YP_014084.1 CDS LMOf2365_1486 NC_002973.6 1479968 1480927 R identified by match to protein family HMM PF02562; PhoH family protein complement(1479968..1480927) Listeria monocytogenes serotype 4b str. F2365 2798797 YP_014085.1 CDS LMOf2365_1487 NC_002973.6 1481115 1481570 R identified by similarity to GP:10173971; match to protein family HMM PF02637; GatB/Yqey domain-containing protein complement(1481115..1481570) Listeria monocytogenes serotype 4b str. F2365 2798685 YP_014086.1 CDS rpsU NC_002973.6 1481581 1481754 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(1481581..1481754) Listeria monocytogenes serotype 4b str. F2365 2799647 YP_014087.1 CDS LMOf2365_1489 NC_002973.6 1481952 1482719 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(1481952..1482719) Listeria monocytogenes serotype 4b str. F2365 2798672 YP_014088.1 CDS prmA NC_002973.6 1482720 1483664 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase complement(1482720..1483664) Listeria monocytogenes serotype 4b str. F2365 2798351 YP_014089.1 CDS dnaJ NC_002973.6 1483736 1484866 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(1483736..1484866) Listeria monocytogenes serotype 4b str. F2365 2798693 YP_014090.1 CDS dnaK NC_002973.6 1485008 1486849 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(1485008..1486849) Listeria monocytogenes serotype 4b str. F2365 2798356 YP_014091.1 CDS grpE NC_002973.6 1486883 1487458 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(1486883..1487458) Listeria monocytogenes serotype 4b str. F2365 2797912 YP_014092.1 CDS hrcA NC_002973.6 1487500 1488537 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(1487500..1488537) Listeria monocytogenes serotype 4b str. F2365 2797153 YP_014093.1 CDS LMOf2365_1495 NC_002973.6 1488684 1489841 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(1488684..1489841) Listeria monocytogenes serotype 4b str. F2365 2798408 YP_014094.1 CDS LMOf2365_1496 NC_002973.6 1489930 1490958 R identified by similarity to OMNI:NTL01SA0329; hypothetical protein complement(1489930..1490958) Listeria monocytogenes serotype 4b str. F2365 2797765 YP_014095.1 CDS LMOf2365_1497 NC_002973.6 1491071 1491508 D identified by match to protein family HMM PF00376; MerR family transcriptional regulator 1491071..1491508 Listeria monocytogenes serotype 4b str. F2365 2797738 YP_014096.1 CDS lepA NC_002973.6 1491554 1493380 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(1491554..1493380) Listeria monocytogenes serotype 4b str. F2365 2797755 YP_014097.1 CDS rpsT NC_002973.6 1493625 1493879 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1493625..1493879 Listeria monocytogenes serotype 4b str. F2365 2797817 YP_014098.1 CDS holA NC_002973.6 1493965 1494996 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(1493965..1494996) Listeria monocytogenes serotype 4b str. F2365 2797826 YP_014099.1 CDS LMOf2365_1501 NC_002973.6 1495064 1497223 R identified by similarity to SP:P39695; match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361; comEC/Rec2 family protein complement(1495064..1497223) Listeria monocytogenes serotype 4b str. F2365 2797734 YP_014100.1 CDS LMOf2365_1502 NC_002973.6 1497321 1497881 R identified by similarity to SP:P32393; match to protein family HMM PF00383; zinc-binding protein ComEB complement(1497321..1497881) Listeria monocytogenes serotype 4b str. F2365 2797855 YP_014101.1 CDS LMOf2365_1503 NC_002973.6 1497953 1498588 R identified by similarity to SP:P39694; match to protein family HMM PF00633; match to protein family HMM TIGR00426; DNA-binding protein ComEA complement(1497953..1498588) Listeria monocytogenes serotype 4b str. F2365 2797813 YP_014102.1 CDS LMOf2365_1504 NC_002973.6 1498658 1499389 R hypothetical protein complement(1498658..1499389) Listeria monocytogenes serotype 4b str. F2365 2799487 YP_014103.1 CDS LMOf2365_1505 NC_002973.6 1499445 1499801 R iojap family protein complement(1499445..1499801) Listeria monocytogenes serotype 4b str. F2365 2797694 YP_014104.1 CDS LMOf2365_1506 NC_002973.6 1499806 1500381 R identified by similarity to OMNI:NTL01LI1511; match to protein family HMM PF01966; match to protein family HMM TIGR00488; hypothetical protein complement(1499806..1500381) Listeria monocytogenes serotype 4b str. F2365 2797698 YP_014105.1 CDS nadD NC_002973.6 1500368 1500934 R transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase complement(1500368..1500934) Listeria monocytogenes serotype 4b str. F2365 2797794 YP_014106.1 CDS LMOf2365_1508 NC_002973.6 1500952 1501242 R identified by similarity to OMNI:NTL01LI1513; match to protein family HMM PF01985; match to protein family HMM TIGR00253; hypothetical protein complement(1500952..1501242) Listeria monocytogenes serotype 4b str. F2365 2797790 YP_014107.1 CDS aroE-2 NC_002973.6 1501242 1502063 R identified by similarity to SP:P54374; match to protein family HMM PF01488; match to protein family HMM TIGR00507; shikimate 5-dehydrogenase complement(1501242..1502063) Listeria monocytogenes serotype 4b str. F2365 2797703 YP_014108.1 CDS LMOf2365_1510 NC_002973.6 1502083 1503183 R in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; GTP-binding protein YqeH complement(1502083..1503183) Listeria monocytogenes serotype 4b str. F2365 2797679 YP_014109.1 CDS LMOf2365_1511 NC_002973.6 1503180 1503701 R identified by match to protein family HMM TIGR01662; match to protein family HMM TIGR01668; hypothetical protein complement(1503180..1503701) Listeria monocytogenes serotype 4b str. F2365 2798483 YP_014110.1 CDS LMOf2365_1512 NC_002973.6 1503863 1505671 D identified by match to protein family HMM PF01432; M3 family peptidase 1503863..1505671 Listeria monocytogenes serotype 4b str. F2365 2797896 YP_014111.1 CDS LMOf2365_1513 NC_002973.6 1505707 1506408 R identified by similarity to SP:P24247; match to protein family HMM PF01048; match to protein family HMM TIGR01704; MTA/SAH nucleosidase complement(1505707..1506408) Listeria monocytogenes serotype 4b str. F2365 2798193 YP_014112.1 CDS LMOf2365_1514 NC_002973.6 1506458 1507081 R hypothetical protein complement(1506458..1507081) Listeria monocytogenes serotype 4b str. F2365 2798506 YP_014113.1 CDS greA NC_002973.6 1507132 1507614 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(1507132..1507614) Listeria monocytogenes serotype 4b str. F2365 2798232 YP_014114.1 CDS udk NC_002973.6 1507808 1508437 R functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase complement(1507808..1508437) Listeria monocytogenes serotype 4b str. F2365 2798417 YP_014115.1 CDS LMOf2365_1517 NC_002973.6 1508434 1509087 R identified by match to protein family HMM PF01596; O-methyltransferase complement(1508434..1509087) Listeria monocytogenes serotype 4b str. F2365 2798527 YP_014116.1 CDS LMOf2365_1518 NC_002973.6 1509163 1510233 R identified by similarity to OMNI:NTL01LI1523; match to protein family HMM PF02618; match to protein family HMM TIGR00247; hypothetical protein complement(1509163..1510233) Listeria monocytogenes serotype 4b str. F2365 2798524 YP_014117.1 CDS LMOf2365_1519 NC_002973.6 1510436 1511062 D identified by similarity to OMNI:NTL01LI1524; match to protein family HMM PF00597; DedA family protein 1510436..1511062 Listeria monocytogenes serotype 4b str. F2365 2798585 YP_014118.1 CDS LMOf2365_1520 NC_002973.6 1511108 1511410 R hypothetical protein complement(1511108..1511410) Listeria monocytogenes serotype 4b str. F2365 2798548 YP_014119.1 CDS LMOf2365_1521 NC_002973.6 1511426 1511842 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(1511426..1511842) Listeria monocytogenes serotype 4b str. F2365 2798572 YP_014120.1 CDS LMOf2365_1522 NC_002973.6 1511839 1512111 R identified by similarity to OMNI:EF1202; match to protein family HMM PF06135; hypothetical protein complement(1511839..1512111) Listeria monocytogenes serotype 4b str. F2365 2798676 YP_014121.1 CDS alaS NC_002973.6 1512203 1514842 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(1512203..1514842) Listeria monocytogenes serotype 4b str. F2365 2798574 YP_014122.1 CDS LMOf2365_1524 NC_002973.6 1515149 1515844 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1515149..1515844) Listeria monocytogenes serotype 4b str. F2365 2798648 YP_014123.1 CDS LMOf2365_1525 NC_002973.6 1515853 1517352 R identified by match to protein family HMM PF02687; ABC transporter permease complement(1515853..1517352) Listeria monocytogenes serotype 4b str. F2365 2798649 YP_014124.1 CDS LMOf2365_1526 NC_002973.6 1517519 1518205 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1517519..1518205 Listeria monocytogenes serotype 4b str. F2365 2798801 YP_014125.1 CDS LMOf2365_1527 NC_002973.6 1518211 1519641 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1518211..1519641 Listeria monocytogenes serotype 4b str. F2365 2798705 YP_014126.1 CDS LMOf2365_1528 NC_002973.6 1519683 1522079 R identified by match to protein family HMM TIGR01448; recombinase D complement(1519683..1522079) Listeria monocytogenes serotype 4b str. F2365 2798731 YP_014127.1 CDS LMOf2365_1529 NC_002973.6 1522107 1522775 R identified by match to protein family HMM PF00515; hypothetical protein complement(1522107..1522775) Listeria monocytogenes serotype 4b str. F2365 2797645 YP_014128.1 CDS LMOf2365_1530 NC_002973.6 1522786 1523526 R identified by similarity to OMNI:NTL01LI1535; hypothetical protein complement(1522786..1523526) Listeria monocytogenes serotype 4b str. F2365 2799541 YP_014129.1 CDS mnmA NC_002973.6 1523645 1524760 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(1523645..1524760) Listeria monocytogenes serotype 4b str. F2365 2798661 YP_014130.1 CDS LMOf2365_1532 NC_002973.6 1524779 1525927 R identified by similarity to SP:P57795; match to protein family HMM PF00266; carbon-sulfur lyase complement(1524779..1525927) Listeria monocytogenes serotype 4b str. F2365 2797884 YP_014131.1 CDS LMOf2365_1533 NC_002973.6 1526308 1527591 R identified by match to protein family HMM PF00004; recombination factor protein RarA complement(1526308..1527591) Listeria monocytogenes serotype 4b str. F2365 2797899 YP_014132.1 CDS LMOf2365_1534 NC_002973.6 1527740 1528162 D identified by similarity to OMNI:SA1681; match to protein family HMM PF02082; match to protein family HMM TIGR00738; Rrf2 family protein 1527740..1528162 Listeria monocytogenes serotype 4b str. F2365 2798262 YP_014133.1 CDS LMOf2365_1535 NC_002973.6 1528407 1529612 D identified by similarity to SP:Q07429; match to protein family HMM PF00909; match to protein family HMM TIGR00836; ammonium transporter 1528407..1529612 Listeria monocytogenes serotype 4b str. F2365 2798186 YP_014134.1 CDS LMOf2365_1536 NC_002973.6 1529626 1529991 D identified by similarity to SP:Q07428; match to protein family HMM PF00543; nitrogen regulatory protein P-II 1529626..1529991 Listeria monocytogenes serotype 4b str. F2365 2798158 YP_014135.1 CDS LMOf2365_1537 NC_002973.6 1530141 1530521 D identified by similarity to OMNI:NTL01LI1542; hypothetical protein 1530141..1530521 Listeria monocytogenes serotype 4b str. F2365 2798286 YP_014136.1 CDS aspS NC_002973.6 1530561 1532336 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(1530561..1532336) Listeria monocytogenes serotype 4b str. F2365 2797909 YP_014137.1 CDS hisS NC_002973.6 1532338 1533615 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(1532338..1533615) Listeria monocytogenes serotype 4b str. F2365 2797903 YP_014138.1 CDS ami NC_002973.6 1534066 1535349 D identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase 1534066..1535349 Listeria monocytogenes serotype 4b str. F2365 2797893 YP_014139.1 CDS dtd NC_002973.6 1535387 1535839 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(1535387..1535839) Listeria monocytogenes serotype 4b str. F2365 2797894 YP_014140.1 CDS relA NC_002973.6 1535855 1538071 R identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; GTP pyrophosphokinase complement(1535855..1538071) Listeria monocytogenes serotype 4b str. F2365 2797870 YP_014141.1 CDS apt NC_002973.6 1538277 1538798 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(1538277..1538798) Listeria monocytogenes serotype 4b str. F2365 2797856 YP_014142.1 CDS recJ NC_002973.6 1538788 1541139 R identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; single-stranded-DNA-specific exonuclease RecJ complement(1538788..1541139) Listeria monocytogenes serotype 4b str. F2365 2799522 YP_014143.1 CDS LMOf2365_1545 NC_002973.6 1541244 1541588 R hypothetical protein complement(1541244..1541588) Listeria monocytogenes serotype 4b str. F2365 2799523 YP_014144.1 CDS secDF NC_002973.6 1541686 1543950 R part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF complement(1541686..1543950) Listeria monocytogenes serotype 4b str. F2365 2797676 YP_014145.1 CDS LMOf2365_1547 NC_002973.6 1544051 1544341 R hypothetical protein complement(1544051..1544341) Listeria monocytogenes serotype 4b str. F2365 2797784 YP_014146.1 CDS yajC NC_002973.6 1544484 1544813 R identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739; preprotein translocase subunit YajC complement(1544484..1544813) Listeria monocytogenes serotype 4b str. F2365 2797785 YP_014147.1 CDS tgt NC_002973.6 1544847 1545986 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(1544847..1545986) Listeria monocytogenes serotype 4b str. F2365 2799109 YP_014148.1 CDS queA NC_002973.6 1546073 1547101 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(1546073..1547101) Listeria monocytogenes serotype 4b str. F2365 2797673 YP_014149.1 CDS ruvB NC_002973.6 1547105 1548112 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(1547105..1548112) Listeria monocytogenes serotype 4b str. F2365 2797674 YP_014150.1 CDS ruvA NC_002973.6 1548128 1548733 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(1548128..1548733) Listeria monocytogenes serotype 4b str. F2365 2799265 YP_014151.1 CDS ldh-2 NC_002973.6 1548857 1549792 R identified by similarity to SP:P14561; match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01771; L-lactate dehydrogenase complement(1548857..1549792) Listeria monocytogenes serotype 4b str. F2365 2799266 YP_014152.1 CDS LMOf2365_1554 NC_002973.6 1549862 1550587 R identified by similarity to OMNI:NTL01LI1559; match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein complement(1549862..1550587) Listeria monocytogenes serotype 4b str. F2365 2797861 YP_014153.1 CDS pheA NC_002973.6 1550698 1551546 R catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase complement(1550698..1551546) Listeria monocytogenes serotype 4b str. F2365 2799157 YP_014154.1 CDS obgE NC_002973.6 1551613 1552902 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(1551613..1552902) Listeria monocytogenes serotype 4b str. F2365 2799273 YP_014155.1 CDS glpK NC_002973.6 1553061 1554554 R Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase complement(1553061..1554554) Listeria monocytogenes serotype 4b str. F2365 2798813 YP_014156.1 CDS glpF-2 NC_002973.6 1554629 1555447 R identified by similarity to SP:P18156; match to protein family HMM PF00230; match to protein family HMM TIGR00861; glycerol uptake facilitator protein complement(1554629..1555447) Listeria monocytogenes serotype 4b str. F2365 2798806 YP_014157.1 CDS rpmA NC_002973.6 1555813 1556103 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(1555813..1556103) Listeria monocytogenes serotype 4b str. F2365 2799145 YP_014158.1 CDS LMOf2365_1560 NC_002973.6 1556117 1556434 R identified by match to protein family HMM PF04327; hypothetical protein complement(1556117..1556434) Listeria monocytogenes serotype 4b str. F2365 2798756 YP_014159.1 CDS rplU NC_002973.6 1556453 1556761 R identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 complement(1556453..1556761) Listeria monocytogenes serotype 4b str. F2365 2798779 YP_014160.1 CDS LMOf2365_1562 NC_002973.6 1556918 1558279 R identified by match to protein family HMM PF00575; ribonuclease complement(1556918..1558279) Listeria monocytogenes serotype 4b str. F2365 2798768 YP_014161.1 CDS minD NC_002973.6 1558332 1559132 R identified by similarity to SP:Q01464; match to protein family HMM PF00991; match to protein family HMM TIGR01968; septum site-determining protein MinD complement(1558332..1559132) Listeria monocytogenes serotype 4b str. F2365 2798769 YP_014162.1 CDS minC NC_002973.6 1559135 1559812 R blocks the formation of polar Z-ring septums; septum formation inhibitor complement(1559135..1559812) Listeria monocytogenes serotype 4b str. F2365 2798746 YP_014163.1 CDS mreD NC_002973.6 1559990 1560508 R identified by similarity to SP:Q01467; match to protein family HMM PF04093; cell shape-determining protein MreD complement(1559990..1560508) Listeria monocytogenes serotype 4b str. F2365 2798718 YP_014164.1 CDS mreC NC_002973.6 1560511 1561398 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(1560511..1561398) Listeria monocytogenes serotype 4b str. F2365 2798688 YP_014165.1 CDS mreB NC_002973.6 1561484 1562497 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(1561484..1562497) Listeria monocytogenes serotype 4b str. F2365 2798689 YP_014166.1 CDS LMOf2365_1568 NC_002973.6 1562752 1562859 R hypothetical protein complement(1562752..1562859) Listeria monocytogenes serotype 4b str. F2365 2798668 YP_014167.1 CDS radC NC_002973.6 1562949 1563623 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(1562949..1563623) Listeria monocytogenes serotype 4b str. F2365 2798669 YP_014168.1 CDS LMOf2365_1570 NC_002973.6 1563635 1564345 R identified by similarity to SP:P15378; match to protein family HMM PF01478; type IV leader peptidase complement(1563635..1564345) Listeria monocytogenes serotype 4b str. F2365 2798653 YP_014169.1 CDS LMOf2365_1571 NC_002973.6 1564425 1564532 R hypothetical protein complement(1564425..1564532) Listeria monocytogenes serotype 4b str. F2365 2798654 YP_014170.1 CDS folC NC_002973.6 1564557 1565846 R identified by similarity to SP:Q05865; match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01499; folylpolyglutamate synthase complement(1564557..1565846) Listeria monocytogenes serotype 4b str. F2365 2798635 YP_014171.1 CDS valS NC_002973.6 1565908 1568559 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(1565908..1568559) Listeria monocytogenes serotype 4b str. F2365 2798631 YP_014172.1 CDS hemL NC_002973.6 1568883 1570172 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(1568883..1570172) Listeria monocytogenes serotype 4b str. F2365 2798616 YP_014173.1 CDS hemB NC_002973.6 1570185 1571159 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(1570185..1571159) Listeria monocytogenes serotype 4b str. F2365 2798617 YP_014174.1 CDS hemD NC_002973.6 1571156 1571878 R catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase complement(1571156..1571878) Listeria monocytogenes serotype 4b str. F2365 2798608 YP_014175.1 CDS hemC NC_002973.6 1571875 1572804 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(1571875..1572804) Listeria monocytogenes serotype 4b str. F2365 2798597 YP_014176.1 CDS hemA NC_002973.6 1572808 1574115 R catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase complement(1572808..1574115) Listeria monocytogenes serotype 4b str. F2365 2798600 YP_014177.1 CDS engB NC_002973.6 1574243 1574827 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(1574243..1574827) Listeria monocytogenes serotype 4b str. F2365 2798601 YP_014178.1 CDS thrS NC_002973.6 1574935 1576857 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(1574935..1576857) Listeria monocytogenes serotype 4b str. F2365 2798560 YP_014179.1 CDS LMOf2365_1581 NC_002973.6 1577046 1577150 R hypothetical protein complement(1577046..1577150) Listeria monocytogenes serotype 4b str. F2365 2798543 YP_014180.1 CDS dnaI NC_002973.6 1577207 1578130 R Primosomal protein that may act to load helicase DnaC during DNA replication; primosomal protein DnaI complement(1577207..1578130) Listeria monocytogenes serotype 4b str. F2365 2798544 YP_014181.1 CDS LMOf2365_1583 NC_002973.6 1578140 1579501 R identified by similarity to SP:P07908; DNA replication protein DnaB complement(1578140..1579501) Listeria monocytogenes serotype 4b str. F2365 2798502 YP_014182.1 CDS nrdR NC_002973.6 1579522 1579986 R identified by similarity to GP:16414084; match to protein family HMM PF03477; match to protein family HMM TIGR00244; NrdR family transcriptional regulator complement(1579522..1579986) Listeria monocytogenes serotype 4b str. F2365 2798504 YP_014183.1 CDS coaE NC_002973.6 1580064 1580666 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(1580064..1580666) Listeria monocytogenes serotype 4b str. F2365 2798494 YP_014184.1 CDS mutM NC_002973.6 1580683 1581504 R Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase complement(1580683..1581504) Listeria monocytogenes serotype 4b str. F2365 2798484 YP_014185.1 CDS polA NC_002973.6 1581528 1584155 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(1581528..1584155) Listeria monocytogenes serotype 4b str. F2365 2798485 YP_014186.1 CDS icd NC_002973.6 1584320 1585582 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(1584320..1585582) Listeria monocytogenes serotype 4b str. F2365 2798476 YP_014187.1 CDS LMOf2365_1589 NC_002973.6 1585602 1586723 R catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; citrate synthase complement(1585602..1586723) Listeria monocytogenes serotype 4b str. F2365 2798477 YP_014188.1 CDS LMOf2365_1590 NC_002973.6 1586760 1587221 R hypothetical protein complement(1586760..1587221) Listeria monocytogenes serotype 4b str. F2365 2798466 YP_014189.1 CDS fxsA NC_002973.6 1587378 1587755 R F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA protein complement(1587378..1587755) Listeria monocytogenes serotype 4b str. F2365 2798467 YP_014190.1 CDS pyk NC_002973.6 1587874 1589631 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(1587874..1589631) Listeria monocytogenes serotype 4b str. F2365 2798449 YP_014191.1 CDS pfkA NC_002973.6 1589914 1590873 R catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase complement(1589914..1590873) Listeria monocytogenes serotype 4b str. F2365 2798420 YP_014192.1 CDS accA NC_002973.6 1591158 1592114 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(1591158..1592114) Listeria monocytogenes serotype 4b str. F2365 2798421 YP_014193.1 CDS accD NC_002973.6 1592104 1592988 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(1592104..1592988) Listeria monocytogenes serotype 4b str. F2365 2798398 YP_014194.1 CDS dnaE NC_002973.6 1593206 1596532 R identified by similarity to SP:O34623; match to protein family HMM PF01336; match to protein family HMM PF02231; match to protein family HMM PF02811; match to protein family HMM TIGR00594; match to protein family HMM TIGR01612; DNA polymerase III subunit alpha complement(1593206..1596532) Listeria monocytogenes serotype 4b str. F2365 2798399 YP_014195.1 CDS LMOf2365_1597 NC_002973.6 1596654 1597589 R identified by similarity to OMNI:NTL01LI1599; match to protein family HMM PF01368; match to protein family HMM PF02272; DHH subfamily 1 protein complement(1596654..1597589) Listeria monocytogenes serotype 4b str. F2365 2798379 YP_014196.1 CDS LMOf2365_1598 NC_002973.6 1597610 1598923 R identified by match to protein family HMM PF00571; match to protein family HMM PF03061; hypothetical protein complement(1597610..1598923) Listeria monocytogenes serotype 4b str. F2365 2798388 YP_014197.1 CDS LMOf2365_1599 NC_002973.6 1598949 1599635 R catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins; metal-dependent hydrolase complement(1598949..1599635) Listeria monocytogenes serotype 4b str. F2365 2798372 YP_014198.1 CDS pepQ NC_002973.6 1599800 1600897 D identified by similarity to SP:P46545; match to protein family HMM PF00557; proline dipeptidase 1599800..1600897 Listeria monocytogenes serotype 4b str. F2365 2798340 YP_014199.1 CDS ald NC_002973.6 1600940 1602052 R identified by match to protein family HMM PF01262; match to protein family HMM PF05222; match to protein family HMM TIGR00518; alanine dehydrogenase complement(1600940..1602052) Listeria monocytogenes serotype 4b str. F2365 2798362 YP_014200.1 CDS LMOf2365_1602 NC_002973.6 1602291 1602755 D identified by match to protein family HMM PF00582; universal stress protein 1602291..1602755 Listeria monocytogenes serotype 4b str. F2365 2798363 YP_014201.1 CDS ackA NC_002973.6 1602807 1604000 R AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase complement(1602807..1604000) Listeria monocytogenes serotype 4b str. F2365 2798269 YP_014202.1 CDS LMOf2365_1604 NC_002973.6 1604024 1605022 R identified by similarity to SP:P22772; hypothetical protein complement(1604024..1605022) Listeria monocytogenes serotype 4b str. F2365 2798177 YP_014203.1 CDS tpx NC_002973.6 1605213 1605710 R antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase complement(1605213..1605710) Listeria monocytogenes serotype 4b str. F2365 2798178 YP_014204.1 CDS LMOf2365_1606 NC_002973.6 1605771 1606307 R identified by match to protein family HMM PF06271; hypothetical protein complement(1605771..1606307) Listeria monocytogenes serotype 4b str. F2365 2798166 YP_014205.1 CDS LMOf2365_1607 NC_002973.6 1606327 1607340 R identified by match to protein family HMM PF01343; match to protein family HMM TIGR00706; U7 family peptidase complement(1606327..1607340) Listeria monocytogenes serotype 4b str. F2365 2798187 YP_014206.1 CDS ppnK NC_002973.6 1607519 1608322 D catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1607519..1608322 Listeria monocytogenes serotype 4b str. F2365 2798168 YP_014207.1 CDS argF-2 NC_002973.6 1608354 1609304 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(1608354..1609304) Listeria monocytogenes serotype 4b str. F2365 2797905 YP_014208.1 CDS argD NC_002973.6 1609301 1610461 R identified by similarity to SP:P36839; match to protein family HMM PF00202; match to protein family HMM TIGR00707; acetylornithine aminotransferase complement(1609301..1610461) Listeria monocytogenes serotype 4b str. F2365 2797889 YP_014209.1 CDS argB NC_002973.6 1610458 1611210 R catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase complement(1610458..1611210) Listeria monocytogenes serotype 4b str. F2365 2799015 YP_014210.1 CDS argJ NC_002973.6 1611223 1612419 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase complement(1611223..1612419) Listeria monocytogenes serotype 4b str. F2365 2799016 YP_014211.1 CDS argC NC_002973.6 1612435 1613466 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase complement(1612435..1613466) Listeria monocytogenes serotype 4b str. F2365 2797710 YP_014212.1 CDS thiI NC_002973.6 1613637 1614848 R Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI complement(1613637..1614848) Listeria monocytogenes serotype 4b str. F2365 2797711 YP_014213.1 CDS LMOf2365_1615 NC_002973.6 1614850 1615989 R identified by match to protein family HMM PF00266; class V aminotransferase complement(1614850..1615989) Listeria monocytogenes serotype 4b str. F2365 2798787 YP_014214.1 CDS ezrA NC_002973.6 1616117 1617832 R acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation; septation ring formation regulator EzrA complement(1616117..1617832) Listeria monocytogenes serotype 4b str. F2365 2798773 YP_014215.1 CDS LMOf2365_1617 NC_002973.6 1618125 1618613 D GAF domain-containing protein 1618125..1618613 Listeria monocytogenes serotype 4b str. F2365 2798783 YP_014216.1 CDS rpsD NC_002973.6 1618825 1619427 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1618825..1619427 Listeria monocytogenes serotype 4b str. F2365 2797636 YP_014217.1 CDS tyrS NC_002973.6 1619527 1620786 R identified by match to protein family HMM PF00579; match to protein family HMM PF01479; match to protein family HMM TIGR00234; tyrosyl-tRNA synthetase complement(1619527..1620786) Listeria monocytogenes serotype 4b str. F2365 2797833 YP_014218.1 CDS ccpA NC_002973.6 1621108 1622115 R identified by similarity to SP:P25144; match to protein family HMM PF00356; match to protein family HMM PF00532; match to protein family HMM TIGR01481; catabolite control protein A complement(1621108..1622115) Listeria monocytogenes serotype 4b str. F2365 2797641 YP_014219.1 CDS LMOf2365_1621 NC_002973.6 1622350 1623435 R catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase complement(1622350..1623435) Listeria monocytogenes serotype 4b str. F2365 2797665 YP_014220.1 CDS LMOf2365_1622 NC_002973.6 1623655 1624179 R identified by similarity to SP:P40780; hypothetical protein complement(1623655..1624179) Listeria monocytogenes serotype 4b str. F2365 2797684 YP_014221.1 CDS LMOf2365_1623 NC_002973.6 1624201 1624656 R identified by match to protein family HMM PF06103; hypothetical protein complement(1624201..1624656) Listeria monocytogenes serotype 4b str. F2365 2797849 YP_014222.1 CDS LMOf2365_1624 NC_002973.6 1624912 1626024 D aminopeptidase 1624912..1626024 Listeria monocytogenes serotype 4b str. F2365 2797712 YP_014223.1 CDS LMOf2365_1625 NC_002973.6 1626065 1626610 R identified by similarity to GP:5457310; match to protein family HMM PF00578; peroxiredoxin complement(1626065..1626610) Listeria monocytogenes serotype 4b str. F2365 2799476 YP_014224.1 CDS LMOf2365_1626 NC_002973.6 1626643 1626762 D hypothetical protein 1626643..1626762 Listeria monocytogenes serotype 4b str. F2365 2799505 YP_014225.1 CDS murC NC_002973.6 1626755 1628098 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(1626755..1628098) Listeria monocytogenes serotype 4b str. F2365 2797686 YP_014226.1 CDS LMOf2365_1628 NC_002973.6 1628393 1630744 R identified by similarity to OMNI:NTL01SA1619; match to protein family HMM PF01580; FtsK/SpoIIIE family protein complement(1628393..1630744) Listeria monocytogenes serotype 4b str. F2365 2797824 YP_014227.1 CDS LMOf2365_1629 NC_002973.6 1631054 1631671 R identified by match to protein family HMM PF01588; tRNA-binding domain-containing protein complement(1631054..1631671) Listeria monocytogenes serotype 4b str. F2365 2797825 YP_014228.1 CDS LMOf2365_1630 NC_002973.6 1631677 1632477 R hypothetical protein complement(1631677..1632477) Listeria monocytogenes serotype 4b str. F2365 2797820 YP_014229.1 CDS LMOf2365_1631 NC_002973.6 1632512 1632823 R identified by match to protein family HMM PF00085; thioredoxin family protein complement(1632512..1632823) Listeria monocytogenes serotype 4b str. F2365 2797803 YP_014230.1 CDS LMOf2365_1632 NC_002973.6 1632938 1633156 R identified by similarity to OMNI:NTL01LI1640; hypothetical protein complement(1632938..1633156) Listeria monocytogenes serotype 4b str. F2365 2797810 YP_014231.1 CDS LMOf2365_1633 NC_002973.6 1633149 1634222 R identified by similarity to SP:Q48677; match to protein family HMM PF05343; glutamyl-aminopeptidase complement(1633149..1634222) Listeria monocytogenes serotype 4b str. F2365 2797779 YP_014232.1 CDS LMOf2365_1634 NC_002973.6 1634420 1634731 D identified by similarity to OMNI:EF3039; hypothetical protein 1634420..1634731 Listeria monocytogenes serotype 4b str. F2365 2797776 YP_014233.1 CDS LMOf2365_1635 NC_002973.6 1634768 1635040 R identified by similarity to SP:P76424; hypothetical protein complement(1634768..1635040) Listeria monocytogenes serotype 4b str. F2365 2797760 YP_014234.1 CDS LMOf2365_1636 NC_002973.6 1635150 1636001 R identified by match to protein family HMM PF00753; metallo-beta-lactamase complement(1635150..1636001) Listeria monocytogenes serotype 4b str. F2365 2797744 YP_014235.1 CDS trmB NC_002973.6 1636062 1636706 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(1636062..1636706) Listeria monocytogenes serotype 4b str. F2365 2797720 YP_014236.1 CDS LMOf2365_1638 NC_002973.6 1636713 1637495 R identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein complement(1636713..1637495) Listeria monocytogenes serotype 4b str. F2365 2797842 YP_014237.1 CDS LMOf2365_1640 NC_002973.6 1639172 1639612 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(1639172..1639612) Listeria monocytogenes serotype 4b str. F2365 2797940 YP_014238.1 CDS dat NC_002973.6 1639834 1640703 R identified by match to protein family HMM PF01063; match to protein family HMM TIGR01121; D-amino acid aminotransferase complement(1639834..1640703) Listeria monocytogenes serotype 4b str. F2365 2797478 YP_014239.1 CDS LMOf2365_1642 NC_002973.6 1640816 1642228 R divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases; dipeptidase PepV complement(1640816..1642228) Listeria monocytogenes serotype 4b str. F2365 2797479 YP_014240.1 CDS LMOf2365_1643 NC_002973.6 1642303 1642716 R identified by match to protein family HMM PF00293; MutT/nudix family protein complement(1642303..1642716) Listeria monocytogenes serotype 4b str. F2365 2799494 YP_014241.1 CDS LMOf2365_1644 NC_002973.6 1642821 1643651 D identified by similarity to GP:16414150; match to protein family HMM PF01256; match to protein family HMM TIGR00196; hypothetical protein 1642821..1643651 Listeria monocytogenes serotype 4b str. F2365 2799495 YP_014242.1 CDS LMOf2365_1645 NC_002973.6 1643689 1644342 R identified by match to protein family HMM PF01569; PAP2 family protein complement(1643689..1644342) Listeria monocytogenes serotype 4b str. F2365 2797202 YP_014243.1 CDS LMOf2365_1646 NC_002973.6 1644352 1645965 R identified by match to protein family HMM PF01943; polysaccharide biosynthesis family protein complement(1644352..1645965) Listeria monocytogenes serotype 4b str. F2365 2798432 YP_014244.1 CDS LMOf2365_1647 NC_002973.6 1646076 1647689 R identified by match to protein family HMM PF01943; polysaccharide biosynthesis family protein complement(1646076..1647689) Listeria monocytogenes serotype 4b str. F2365 2798427 YP_014245.1 CDS LMOf2365_1648 NC_002973.6 1647774 1648211 R identified by similarity to OMNI:NTL01LI1656; hypothetical protein complement(1647774..1648211) Listeria monocytogenes serotype 4b str. F2365 2798440 YP_014246.1 CDS trpA NC_002973.6 1648282 1649055 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(1648282..1649055) Listeria monocytogenes serotype 4b str. F2365 2797595 YP_014247.1 CDS trpB NC_002973.6 1649048 1650250 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(1649048..1650250) Listeria monocytogenes serotype 4b str. F2365 2798392 YP_014248.1 CDS trpF NC_002973.6 1650253 1650861 R catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase complement(1650253..1650861) Listeria monocytogenes serotype 4b str. F2365 2798393 YP_014249.1 CDS trpC NC_002973.6 1650858 1651616 R involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; Indole-3-glycerol phosphate synthase complement(1650858..1651616) Listeria monocytogenes serotype 4b str. F2365 2798367 YP_014250.1 CDS trpD NC_002973.6 1651613 1652632 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(1651613..1652632) Listeria monocytogenes serotype 4b str. F2365 2798368 YP_014251.1 CDS trpG NC_002973.6 1652604 1653209 R TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II complement(1652604..1653209) Listeria monocytogenes serotype 4b str. F2365 2797623 YP_014252.1 CDS trpE NC_002973.6 1653206 1654579 R with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I complement(1653206..1654579) Listeria monocytogenes serotype 4b str. F2365 2797624 YP_014253.1 CDS adhE NC_002973.6 1655655 1658255 D identified by match to protein family HMM PF00171; match to protein family HMM PF00465; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 1655655..1658255 Listeria monocytogenes serotype 4b str. F2365 2798720 YP_014254.1 CDS LMOf2365_1657 NC_002973.6 1658378 1658806 D hypothetical protein 1658378..1658806 Listeria monocytogenes serotype 4b str. F2365 2798681 YP_014255.1 CDS LMOf2365_1658 NC_002973.6 1658890 1659810 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1658890..1659810 Listeria monocytogenes serotype 4b str. F2365 2797593 YP_014256.1 CDS LMOf2365_1659 NC_002973.6 1659807 1660874 D ABC transporter permease 1659807..1660874 Listeria monocytogenes serotype 4b str. F2365 2798702 YP_014257.1 CDS LMOf2365_1660 NC_002973.6 1660911 1661885 R identified by match to protein family HMM PF02016; hypothetical protein complement(1660911..1661885) Listeria monocytogenes serotype 4b str. F2365 2798742 YP_014258.1 CDS tag NC_002973.6 1661882 1662463 R identified by similarity to SP:P05100; match to protein family HMM PF03352; DNA-3-methyladenine glycosylase I complement(1661882..1662463) Listeria monocytogenes serotype 4b str. F2365 2797574 YP_014259.1 CDS acnA NC_002973.6 1662809 1665511 R Catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(1662809..1665511) Listeria monocytogenes serotype 4b str. F2365 2798665 YP_014260.1 CDS LMOf2365_1663 NC_002973.6 1665666 1666469 R identified by match to protein family HMM PF01740; STAS domain-containing protein complement(1665666..1666469) Listeria monocytogenes serotype 4b str. F2365 2798642 YP_014261.1 CDS LMOf2365_1664 NC_002973.6 1666493 1666915 R identified by similarity to OMNI:NTL01LI1673; hypothetical protein complement(1666493..1666915) Listeria monocytogenes serotype 4b str. F2365 2798604 YP_014262.1 CDS LMOf2365_1665 NC_002973.6 1666915 1670133 R identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434; match to protein family HMM TIGR01612; SNF2 family helicase complement(1666915..1670133) Listeria monocytogenes serotype 4b str. F2365 2798638 YP_014263.1 CDS LMOf2365_1666 NC_002973.6 1670217 1673288 R identified by match to protein family HMM TIGR01612; SbcC family exonuclease complement(1670217..1673288) Listeria monocytogenes serotype 4b str. F2365 2798589 YP_014264.1 CDS LMOf2365_1667 NC_002973.6 1673285 1674409 R identified by similarity to SP:P23479; match to protein family HMM PF00149; match to protein family HMM TIGR00619; exonuclease SbcD complement(1673285..1674409) Listeria monocytogenes serotype 4b str. F2365 2798624 YP_014265.1 CDS LMOf2365_1668 NC_002973.6 1674525 1675133 D identified by match to protein family HMM PF01553; match to protein family HMM TIGR00530; 1-acyl-sn-glycerol-3-phosphate acyltransferase 1674525..1675133 Listeria monocytogenes serotype 4b str. F2365 2797564 YP_014266.1 CDS LMOf2365_1669 NC_002973.6 1675175 1675690 R identified by similarity to OMNI:NTL01LI1678; hypothetical protein complement(1675175..1675690) Listeria monocytogenes serotype 4b str. F2365 2798567 YP_014267.1 CDS LMOf2365_1670 NC_002973.6 1675864 1676352 R identified by similarity to OMNI:SA1380; hypothetical protein complement(1675864..1676352) Listeria monocytogenes serotype 4b str. F2365 2797716 YP_014268.1 CDS LMOf2365_1671 NC_002973.6 1676433 1678238 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(1676433..1678238) Listeria monocytogenes serotype 4b str. F2365 2797403 YP_014269.1 CDS LMOf2365_1672 NC_002973.6 1678222 1679991 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(1678222..1679991) Listeria monocytogenes serotype 4b str. F2365 2798753 YP_014270.1 CDS LMOf2365_1673 NC_002973.6 1680395 1681000 R hypothetical protein complement(1680395..1681000) Listeria monocytogenes serotype 4b str. F2365 2798580 YP_014271.1 CDS LMOf2365_1674 NC_002973.6 1681031 1681525 R hypothetical protein complement(1681031..1681525) Listeria monocytogenes serotype 4b str. F2365 2797873 YP_014272.1 CDS LMOf2365_1675 NC_002973.6 1682007 1682114 R hypothetical protein complement(1682007..1682114) Listeria monocytogenes serotype 4b str. F2365 2798612 YP_014273.1 CDS LMOf2365_1676 NC_002973.6 1682319 1682882 R identified by match to protein family HMM PF04892; hypothetical protein complement(1682319..1682882) Listeria monocytogenes serotype 4b str. F2365 2798539 YP_014274.1 CDS LMOf2365_1677 NC_002973.6 1682900 1683331 R hypothetical protein complement(1682900..1683331) Listeria monocytogenes serotype 4b str. F2365 2797865 YP_014275.1 CDS tsf NC_002973.6 1683890 1684774 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(1683890..1684774) Listeria monocytogenes serotype 4b str. F2365 2798556 YP_014276.1 CDS rpsB NC_002973.6 1684854 1685603 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(1684854..1685603) Listeria monocytogenes serotype 4b str. F2365 2797860 YP_014277.1 CDS LMOf2365_1681 NC_002973.6 1686342 1687790 R identified by similarity to SP:P27219; match to protein family HMM PF00367; match to protein family HMM PF02378; PTS system sucrose-specific transporter subunit IIBC complement(1686342..1687790) Listeria monocytogenes serotype 4b str. F2365 2798553 YP_014278.1 CDS murQ NC_002973.6 1687803 1688693 R catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase complement(1687803..1688693) Listeria monocytogenes serotype 4b str. F2365 2798511 YP_014279.1 CDS LMOf2365_1683 NC_002973.6 1688834 1689685 R identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family phosphosugar-binding transcriptional regulator complement(1688834..1689685) Listeria monocytogenes serotype 4b str. F2365 2798512 YP_014280.1 CDS leuS NC_002973.6 1689773 1692184 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(1689773..1692184) Listeria monocytogenes serotype 4b str. F2365 2798737 YP_014281.1 CDS LMOf2365_1685 NC_002973.6 1692588 1693553 D identified by similarity to GP:16414257; match to protein family HMM PF04055; match to protein family HMM TIGR01212; hypothetical protein 1692588..1693553 Listeria monocytogenes serotype 4b str. F2365 2798535 YP_014282.1 CDS LMOf2365_1686 NC_002973.6 1693550 1694128 D identified by similarity to OMNI:NTL01BH3288; hypothetical protein 1693550..1694128 Listeria monocytogenes serotype 4b str. F2365 2797878 YP_014283.1 CDS asnB NC_002973.6 1694150 1696015 R identified by similarity to SP:P54420; match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536; asparagine synthase complement(1694150..1696015) Listeria monocytogenes serotype 4b str. F2365 2798460 YP_014284.1 CDS metK NC_002973.6 1696152 1697351 R methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(1696152..1697351) Listeria monocytogenes serotype 4b str. F2365 2798516 YP_014285.1 CDS LMOf2365_1689 NC_002973.6 1697773 1698075 D identified by similarity to OMNI:NTL01LI1763; hypothetical protein 1697773..1698075 Listeria monocytogenes serotype 4b str. F2365 2798517 YP_014286.1 CDS LMOf2365_1690 NC_002973.6 1698108 1703246 R identified by match to protein family HMM PF02494; match to protein family HMM TIGR01612; hypothetical protein complement(1698108..1703246) Listeria monocytogenes serotype 4b str. F2365 2798711 YP_014287.1 CDS LMOf2365_1691 NC_002973.6 1703341 1704252 R identified by match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01771; lactate/malate dehydrogenase complement(1703341..1704252) Listeria monocytogenes serotype 4b str. F2365 2798473 YP_014288.1 CDS LMOf2365_1692 NC_002973.6 1704269 1704511 R identified by similarity to SP:O34365; hypothetical protein complement(1704269..1704511) Listeria monocytogenes serotype 4b str. F2365 2797881 YP_014289.1 CDS LMOf2365_1693 NC_002973.6 1704562 1705035 R identified by match to protein family HMM PF00293; MutT/nudix family protein complement(1704562..1705035) Listeria monocytogenes serotype 4b str. F2365 2797828 YP_014290.1 CDS LMOf2365_1694 NC_002973.6 1705109 1705375 D identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein 1705109..1705375 Listeria monocytogenes serotype 4b str. F2365 2798765 YP_014291.1 CDS LMOf2365_1695 NC_002973.6 1705516 1706478 D identified by similarity to GP:4249623; match to protein family HMM PF01297; laminin-binding surface protein 1705516..1706478 Listeria monocytogenes serotype 4b str. F2365 2797671 YP_014292.1 CDS menE NC_002973.6 1706496 1707899 R converts O-succinylbenzoate to O-succinylbenzoyl-CoA; O-succinylbenzoic acid--CoA ligase complement(1706496..1707899) Listeria monocytogenes serotype 4b str. F2365 2798871 YP_014293.1 CDS menB NC_002973.6 1707921 1708739 R catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase complement(1707921..1708739) Listeria monocytogenes serotype 4b str. F2365 2799385 YP_014294.1 CDS LMOf2365_1698 NC_002973.6 1708736 1709563 R identified by similarity to OMNI:EF0449; match to protein family HMM PF00561; alpha/beta fold family hydrolase complement(1708736..1709563) Listeria monocytogenes serotype 4b str. F2365 2799386 YP_014295.1 CDS menD NC_002973.6 1709565 1711307 R SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase complement(1709565..1711307) Listeria monocytogenes serotype 4b str. F2365 2799421 YP_014296.1 CDS LMOf2365_1700 NC_002973.6 1711304 1712692 R synthesizes isochorismate acid from chorismate; menaquinone-specific isochorismate synthase complement(1711304..1712692) Listeria monocytogenes serotype 4b str. F2365 2798250 YP_014297.1 CDS LMOf2365_1701 NC_002973.6 1712867 1713805 D catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1712867..1713805 Listeria monocytogenes serotype 4b str. F2365 2798251 YP_014298.1 CDS LMOf2365_1702 NC_002973.6 1713839 1715692 R catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase complement(1713839..1715692) Listeria monocytogenes serotype 4b str. F2365 2797412 YP_014299.1 CDS LMOf2365_1703 NC_002973.6 1715689 1716861 R catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase complement(1715689..1716861) Listeria monocytogenes serotype 4b str. F2365 2798926 YP_014300.1 CDS LMOf2365_1704 NC_002973.6 1716854 1717978 R identified by similarity to SP:Q9RAS9; match to protein family HMM PF01053; cystathionine beta/gamma-lyase complement(1716854..1717978) Listeria monocytogenes serotype 4b str. F2365 2798916 YP_014301.1 CDS metE NC_002973.6 1718000 1720297 R catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase complement(1718000..1720297) Listeria monocytogenes serotype 4b str. F2365 2798893 YP_014302.1 CDS LMOf2365_1706 NC_002973.6 1720587 1721762 R identified by match to protein family HMM PF00083; major facilitator family transporter complement(1720587..1721762) Listeria monocytogenes serotype 4b str. F2365 2798887 YP_014303.1 CDS LMOf2365_1707 NC_002973.6 1729190 1729636 R identified by similarity to SP:P71086; match to protein family HMM PF01475; peroxide operon transcriptional regulator complement(1729190..1729636) Listeria monocytogenes serotype 4b str. F2365 2799715 YP_014304.1 CDS LMOf2365_1708 NC_002973.6 1729719 1730660 R identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase complement(1729719..1730660) Listeria monocytogenes serotype 4b str. F2365 2799720 YP_014305.1 CDS gsaB NC_002973.6 1730805 1732103 D converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate; glutamate-1-semialdehyde aminotransferase 1730805..1732103 Listeria monocytogenes serotype 4b str. F2365 2799725 YP_014306.1 CDS LMOf2365_1710 NC_002973.6 1732209 1733297 D identified by similarity to OMNI:NTL01LI1783; match to protein family HMM PF06081; hypothetical protein 1732209..1733297 Listeria monocytogenes serotype 4b str. F2365 2799727 YP_014307.1 CDS LMOf2365_1711 NC_002973.6 1733339 1733866 R identified by similarity to OMNI:SA1925; match to protein family HMM PF04167; hypothetical protein complement(1733339..1733866) Listeria monocytogenes serotype 4b str. F2365 2797957 YP_014308.1 CDS LMOf2365_1712 NC_002973.6 1734021 1734767 R Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase complement(1734021..1734767) Listeria monocytogenes serotype 4b str. F2365 2797852 YP_014309.1 CDS mutY NC_002973.6 1734771 1735859 R identified by similarity to SP:Q05869; match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01084; A/G-specific adenine glycosylase complement(1734771..1735859) Listeria monocytogenes serotype 4b str. F2365 2799771 YP_014310.1 CDS LMOf2365_1714 NC_002973.6 1736068 1737048 D identified by similarity to OMNI:SA1927; hypothetical protein 1736068..1737048 Listeria monocytogenes serotype 4b str. F2365 2799830 YP_014311.1 CDS LMOf2365_1715 NC_002973.6 1737077 1737547 R identified by match to protein family HMM PF00692; dUTPase complement(1737077..1737547) Listeria monocytogenes serotype 4b str. F2365 2799819 YP_014312.1 CDS LMOf2365_1716 NC_002973.6 1737550 1737783 R identified by similarity to GP:16414303; hypothetical protein complement(1737550..1737783) Listeria monocytogenes serotype 4b str. F2365 2798904 YP_014313.1 CDS recX NC_002973.6 1737785 1738594 R binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX complement(1737785..1738594) Listeria monocytogenes serotype 4b str. F2365 2798988 YP_014314.1 CDS LMOf2365_1718 NC_002973.6 1738683 1739594 D identified by similarity to GP:15980756; match to protein family HMM TIGR01777; hypothetical protein 1738683..1739594 Listeria monocytogenes serotype 4b str. F2365 2798080 YP_014315.1 CDS LMOf2365_1719 NC_002973.6 1739615 1742212 R identified by match to protein family HMM PF04329; match to protein family HMM PF04330; match to protein family HMM PF04331; hypothetical protein complement(1739615..1742212) Listeria monocytogenes serotype 4b str. F2365 2799620 YP_014316.1 CDS LMOf2365_1720 NC_002973.6 1742239 1742913 R identified by match to protein family HMM PF04892; hypothetical protein complement(1742239..1742913) Listeria monocytogenes serotype 4b str. F2365 2798946 YP_014317.1 CDS LMOf2365_1721 NC_002973.6 1743121 1744086 D identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 1743121..1744086 Listeria monocytogenes serotype 4b str. F2365 2797405 YP_014318.1 CDS LMOf2365_1722 NC_002973.6 1744131 1744673 R acetyltransferase complement(1744131..1744673) Listeria monocytogenes serotype 4b str. F2365 2799430 YP_014319.1 CDS LMOf2365_1723 NC_002973.6 1744863 1745765 D identified by match to protein family HMM PF00015; match to protein family HMM PF00785; match to protein family HMM TIGR00229; methyl-accepting chemotaxis protein 1744863..1745765 Listeria monocytogenes serotype 4b str. F2365 2799453 YP_014320.1 CDS LMOf2365_1724 NC_002973.6 1745793 1745999 D identified by similarity to OMNI:NTL01LI1797; hypothetical protein 1745793..1745999 Listeria monocytogenes serotype 4b str. F2365 2798087 YP_014321.1 CDS LMOf2365_1725 NC_002973.6 1746039 1746392 R identified by similarity to OMNI:NTL01LI1798; hypothetical protein complement(1746039..1746392) Listeria monocytogenes serotype 4b str. F2365 2797264 YP_014322.1 CDS LMOf2365_1726 NC_002973.6 1746421 1746822 R identified by match to protein family HMM PF00903; glyoxalase complement(1746421..1746822) Listeria monocytogenes serotype 4b str. F2365 2799760 YP_014323.1 CDS LMOf2365_1727 NC_002973.6 1746837 1748216 R identified by match to protein family HMM PF01938; match to protein family HMM PF05958; match to protein family HMM TIGR00479; RNA methyltransferase complement(1746837..1748216) Listeria monocytogenes serotype 4b str. F2365 2799761 YP_014324.1 CDS LMOf2365_1728 NC_002973.6 1748281 1748661 R identified by similarity to GP:15978279; match to protein family HMM PF02566; hypothetical protein complement(1748281..1748661) Listeria monocytogenes serotype 4b str. F2365 2797954 YP_014325.1 CDS LMOf2365_1729 NC_002973.6 1748768 1749412 D identified by match to protein family HMM PF01712; deoxynucleoside kinase 1748768..1749412 Listeria monocytogenes serotype 4b str. F2365 2799599 YP_014326.1 CDS LMOf2365_1730 NC_002973.6 1749442 1750311 R identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; ribonuclease BN complement(1749442..1750311) Listeria monocytogenes serotype 4b str. F2365 2797562 YP_014327.1 CDS LMOf2365_1731 NC_002973.6 1750401 1750622 D identified by similarity to OMNI:NTL01LI1807; hypothetical protein 1750401..1750622 Listeria monocytogenes serotype 4b str. F2365 2799633 YP_014328.1 CDS LMOf2365_1732 NC_002973.6 1750642 1751436 R identified by similarity to SP:P30180; match to protein family HMM PF02522; aminoglycoside N3-acetyltransferase complement(1750642..1751436) Listeria monocytogenes serotype 4b str. F2365 2797583 YP_014329.1 CDS map NC_002973.6 1751574 1752332 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase complement(1751574..1752332) Listeria monocytogenes serotype 4b str. F2365 2797598 YP_014330.1 CDS LMOf2365_1734 NC_002973.6 1752520 1752966 D identified by match to protein family HMM PF00258; match to protein family HMM TIGR01753; flavodoxin 1752520..1752966 Listeria monocytogenes serotype 4b str. F2365 2797266 YP_014331.1 CDS LMOf2365_1735 NC_002973.6 1753104 1754336 D identified by similarity to SP:P39762; match to protein family HMM PF02073; aminopeptidase 1753104..1754336 Listeria monocytogenes serotype 4b str. F2365 2797267 YP_014332.1 CDS LMOf2365_1736 NC_002973.6 1754440 1755699 D identified by match to protein family HMM PF00083; major facilitator family transporter 1754440..1755699 Listeria monocytogenes serotype 4b str. F2365 2797063 YP_014333.1 CDS LMOf2365_1737 NC_002973.6 1755674 1755832 D hypothetical protein 1755674..1755832 Listeria monocytogenes serotype 4b str. F2365 2797047 YP_014334.1 CDS LMOf2365_1738 NC_002973.6 1755917 1756909 D identified by similarity to SP:P39763; match to protein family HMM TIGR00904; rod shape-determining protein MreB 1755917..1756909 Listeria monocytogenes serotype 4b str. F2365 2797429 YP_014335.1 CDS LMOf2365_1739 NC_002973.6 1757183 1757755 R identified by similarity to GP:10172921; hypothetical protein complement(1757183..1757755) Listeria monocytogenes serotype 4b str. F2365 2797941 YP_014336.1 CDS LMOf2365_1740 NC_002973.6 1757846 1758511 R identified by similarity to OMNI:NTL01LI1814; hypothetical protein complement(1757846..1758511) Listeria monocytogenes serotype 4b str. F2365 2797960 YP_014337.1 CDS LMOf2365_1741 NC_002973.6 1758699 1759283 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1758699..1759283 Listeria monocytogenes serotype 4b str. F2365 2797821 YP_014338.1 CDS LMOf2365_1742 NC_002973.6 1759375 1760463 R identified by similarity to OMNI:NTL01LL0179; match to protein family HMM PF05913; hypothetical protein complement(1759375..1760463) Listeria monocytogenes serotype 4b str. F2365 2798117 YP_014339.1 CDS LMOf2365_1743 NC_002973.6 1760485 1760787 R identified by similarity to SP:P46319; match to protein family HMM PF02255; PTS system beta-glucoside-specific transporter subunit IIA complement(1760485..1760787) Listeria monocytogenes serotype 4b str. F2365 2798209 YP_014340.1 CDS LMOf2365_1744 NC_002973.6 1760857 1761165 R identified by similarity to SP:P46318; match to protein family HMM PF02302; PTS system beta-glucoside-specific transporter subunit IIB complement(1760857..1761165) Listeria monocytogenes serotype 4b str. F2365 2798220 YP_014341.1 CDS LMOf2365_1746 NC_002973.6 1764136 1765464 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; helicase domain-containing protein complement(1764136..1765464) Listeria monocytogenes serotype 4b str. F2365 2799880 YP_014342.1 CDS LMOf2365_1747 NC_002973.6 1765507 1766280 R hypothetical protein complement(1765507..1766280) Listeria monocytogenes serotype 4b str. F2365 2799027 YP_014343.1 CDS LMOf2365_1748 NC_002973.6 1766273 1766953 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1766273..1766953) Listeria monocytogenes serotype 4b str. F2365 2799070 YP_014344.1 CDS LMOf2365_1749 NC_002973.6 1766946 1767314 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(1766946..1767314) Listeria monocytogenes serotype 4b str. F2365 2799247 YP_014345.1 CDS LMOf2365_1750 NC_002973.6 1767435 1768418 R identified by match to protein family HMM PF01408; Gfo/Idh/MocA family oxidoreductase complement(1767435..1768418) Listeria monocytogenes serotype 4b str. F2365 2799904 YP_014346.1 CDS LMOf2365_1751 NC_002973.6 1768478 1769443 R identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator complement(1768478..1769443) Listeria monocytogenes serotype 4b str. F2365 2799905 YP_014347.1 CDS LMOf2365_1752 NC_002973.6 1769491 1772745 R identified by similarity to OMNI:NTL01LI1827; match to protein family HMM TIGR01612; hypothetical protein complement(1769491..1772745) Listeria monocytogenes serotype 4b str. F2365 2799454 YP_014348.1 CDS bglX-1 NC_002973.6 1772748 1774919 R identified by similarity to SP:P33363; match to protein family HMM PF00933; match to protein family HMM PF01915; beta-glucosidase complement(1772748..1774919) Listeria monocytogenes serotype 4b str. F2365 2799486 YP_014349.1 CDS LMOf2365_1754 NC_002973.6 1775348 1776592 D identified by match to protein family HMM PF01547; ABC transporter substrate-binding protein 1775348..1776592 Listeria monocytogenes serotype 4b str. F2365 2798116 YP_014350.1 CDS LMOf2365_1755 NC_002973.6 1776653 1777546 D identified by match to protein family HMM PF00528; ABC transporter permease 1776653..1777546 Listeria monocytogenes serotype 4b str. F2365 2799581 YP_014351.1 CDS LMOf2365_1756 NC_002973.6 1777564 1778394 D identified by match to protein family HMM PF00528; ABC transporter permease 1777564..1778394 Listeria monocytogenes serotype 4b str. F2365 2799496 YP_014352.1 CDS gltD NC_002973.6 1778439 1779908 R glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase complement(1778439..1779908) Listeria monocytogenes serotype 4b str. F2365 2798295 YP_014353.1 CDS gltB NC_002973.6 1779923 1784515 R identified by similarity to SP:P39812; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04897; match to protein family HMM PF04898; match to protein family HMM TIGR01612; glutamate synthase complement(1779923..1784515) Listeria monocytogenes serotype 4b str. F2365 2799444 YP_014354.1 CDS gltC NC_002973.6 1784708 1785595 D identified by similarity to SP:P20668; match to protein family HMM PF00126; match to protein family HMM PF03466; GltC family transcriptional regulator 1784708..1785595 Listeria monocytogenes serotype 4b str. F2365 2799445 YP_014355.1 CDS LMOf2365_1760 NC_002973.6 1785592 1786110 R identified by match to protein family HMM PF00583; acetyltransferase complement(1785592..1786110) Listeria monocytogenes serotype 4b str. F2365 2799447 YP_014356.1 CDS LMOf2365_1761 NC_002973.6 1786113 1787216 R identified by match to protein family HMM PF00465; alcohol dehydrogenase, iron-dependent complement(1786113..1787216) Listeria monocytogenes serotype 4b str. F2365 2799563 YP_014357.1 CDS LMOf2365_1762 NC_002973.6 1787311 1788126 R identified by similarity to SP:P10344; match to protein family HMM PF00497; amino acid ABC transporter substrate-binding protein complement(1787311..1788126) Listeria monocytogenes serotype 4b str. F2365 2797964 YP_014358.1 CDS LMOf2365_1763 NC_002973.6 1788128 1788775 R identified by similarity to SP:P10346; match to protein family HMM PF00005; amino acid ABC transporter ATP-binding protein complement(1788128..1788775) Listeria monocytogenes serotype 4b str. F2365 2799432 YP_014359.1 CDS LMOf2365_1764 NC_002973.6 1788786 1789427 R identified by similarity to SP:P76315; match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter permease complement(1788786..1789427) Listeria monocytogenes serotype 4b str. F2365 2799568 YP_014360.1 CDS LMOf2365_1766 NC_002973.6 1789825 1790865 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(1789825..1790865) Listeria monocytogenes serotype 4b str. F2365 2798066 YP_014361.1 CDS ade NC_002973.6 1790887 1792626 R identified by match to protein family HMM PF01979; match to protein family HMM TIGR01178; adenine deaminase complement(1790887..1792626) Listeria monocytogenes serotype 4b str. F2365 2798940 YP_014362.1 CDS LMOf2365_1768 NC_002973.6 1792646 1793104 R identified by similarity to OMNI:NTL01LI1842; hypothetical protein complement(1792646..1793104) Listeria monocytogenes serotype 4b str. F2365 2798941 YP_014363.1 CDS LMOf2365_1769 NC_002973.6 1793125 1794000 R hypothetical protein complement(1793125..1794000) Listeria monocytogenes serotype 4b str. F2365 2799575 YP_014364.1 CDS LMOf2365_1770 NC_002973.6 1794070 1794747 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(1794070..1794747) Listeria monocytogenes serotype 4b str. F2365 2799642 YP_014365.1 CDS LMOf2365_1771 NC_002973.6 1794810 1796789 R identified by match to protein family HMM PF02687; ABC transporter permease complement(1794810..1796789) Listeria monocytogenes serotype 4b str. F2365 2797311 YP_014366.1 CDS LMOf2365_1772 NC_002973.6 1796779 1797546 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1796779..1797546) Listeria monocytogenes serotype 4b str. F2365 2797077 YP_014367.1 CDS LMOf2365_1773 NC_002973.6 1797675 1798184 R identified by similarity to OMNI:NTL01LI1847; hypothetical protein complement(1797675..1798184) Listeria monocytogenes serotype 4b str. F2365 2798122 YP_014368.1 CDS aroK NC_002973.6 1798408 1798881 D identified by match to protein family HMM PF01202; shikimate kinase 1798408..1798881 Listeria monocytogenes serotype 4b str. F2365 2797473 YP_014369.1 CDS LMOf2365_1775 NC_002973.6 1798912 1799466 R hypothetical protein complement(1798912..1799466) Listeria monocytogenes serotype 4b str. F2365 2797474 YP_014370.1 CDS LMOf2365_1776 NC_002973.6 1799801 1801162 R identified by match to protein family HMM PF01938; match to protein family HMM PF05958; match to protein family HMM TIGR00479; RNA methyltransferase complement(1799801..1801162) Listeria monocytogenes serotype 4b str. F2365 2797541 YP_014371.1 CDS LMOf2365_1777 NC_002973.6 1801186 1801941 R hypothetical protein complement(1801186..1801941) Listeria monocytogenes serotype 4b str. F2365 2798133 YP_014372.1 CDS LMOf2365_1778 NC_002973.6 1802089 1803021 R similar to YegS from E. coli; lipid kinase complement(1802089..1803021) Listeria monocytogenes serotype 4b str. F2365 2797775 YP_014373.1 CDS gatB NC_002973.6 1803167 1804597 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(1803167..1804597) Listeria monocytogenes serotype 4b str. F2365 2798128 YP_014374.1 CDS gatA NC_002973.6 1804609 1806060 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(1804609..1806060) Listeria monocytogenes serotype 4b str. F2365 2798144 YP_014375.1 CDS gatC NC_002973.6 1806084 1806377 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C complement(1806084..1806377) Listeria monocytogenes serotype 4b str. F2365 2798145 YP_014376.1 CDS LMOf2365_1782 NC_002973.6 1806502 1807617 R lipoprotein complement(1806502..1807617) Listeria monocytogenes serotype 4b str. F2365 2798147 YP_014377.1 CDS ligA NC_002973.6 1807614 1809629 R this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA complement(1807614..1809629) Listeria monocytogenes serotype 4b str. F2365 2798136 YP_014378.1 CDS pcrA NC_002973.6 1809655 1811856 R identified by similarity to SP:P56255; match to protein family HMM PF00580; match to protein family HMM TIGR01073; ATP-dependent DNA helicase PcrA complement(1809655..1811856) Listeria monocytogenes serotype 4b str. F2365 2798137 YP_014379.1 CDS LMOf2365_1785 NC_002973.6 1811915 1812592 R PcrB-like protein; GGGP synthase; member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid metabolism and especially important as the ether linkages in archaea are different than those in bacteria; GGGP synthase lies at the branch point for membrane lipid biosynthesis; cytosolic; T acidophilum protein acts as a homodimer while M thermoautotrophicum protein has been reported to function as a pentamer; geranylgeranylglyceryl phosphate synthase complement(1811915..1812592) Listeria monocytogenes serotype 4b str. F2365 2798138 YP_014380.1 CDS LMOf2365_1786 NC_002973.6 1812799 1814154 D identified by match to protein family HMM PF00209; sodium:neurotransmitter symporter family protein 1812799..1814154 Listeria monocytogenes serotype 4b str. F2365 2798140 YP_014381.1 CDS LMOf2365_1787 NC_002973.6 1814197 1814451 R identified by similarity to OMNI:NTL01LI1861; hypothetical protein complement(1814197..1814451) Listeria monocytogenes serotype 4b str. F2365 2798141 YP_014382.1 CDS LMOf2365_1788 NC_002973.6 1814468 1814764 R hypothetical protein complement(1814468..1814764) Listeria monocytogenes serotype 4b str. F2365 2798142 YP_014383.1 CDS purD NC_002973.6 1814903 1816165 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(1814903..1816165) Listeria monocytogenes serotype 4b str. F2365 2798129 YP_014384.1 CDS purH NC_002973.6 1816190 1817719 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(1816190..1817719) Listeria monocytogenes serotype 4b str. F2365 2798131 YP_014385.1 CDS purN NC_002973.6 1817725 1818291 R identified by match to protein family HMM PF00551; match to protein family HMM TIGR00639; phosphoribosylglycinamide formyltransferase complement(1817725..1818291) Listeria monocytogenes serotype 4b str. F2365 2798134 YP_014386.1 CDS purM NC_002973.6 1818288 1819337 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(1818288..1819337) Listeria monocytogenes serotype 4b str. F2365 2798119 YP_014387.1 CDS purF NC_002973.6 1819356 1820783 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(1819356..1820783) Listeria monocytogenes serotype 4b str. F2365 2798120 YP_014388.1 CDS purL NC_002973.6 1820768 1822987 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II complement(1820768..1822987) Listeria monocytogenes serotype 4b str. F2365 2798124 YP_014389.1 CDS purQ NC_002973.6 1822980 1823663 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I complement(1822980..1823663) Listeria monocytogenes serotype 4b str. F2365 2798125 YP_014390.1 CDS purS NC_002973.6 1823667 1823912 R With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; phosphoribosylformylglycinamidine synthase subunit PurS complement(1823667..1823912) Listeria monocytogenes serotype 4b str. F2365 2798156 YP_014391.1 CDS purC NC_002973.6 1823924 1824637 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase complement(1823924..1824637) Listeria monocytogenes serotype 4b str. F2365 2799772 YP_014392.1 CDS purB NC_002973.6 1824718 1826010 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(1824718..1826010) Listeria monocytogenes serotype 4b str. F2365 2799756 YP_014393.1 CDS purK NC_002973.6 1826029 1827162 R With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(1826029..1827162) Listeria monocytogenes serotype 4b str. F2365 2799798 YP_014394.1 CDS purE NC_002973.6 1827146 1827634 R Catalyzes a step in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(1827146..1827634) Listeria monocytogenes serotype 4b str. F2365 2799818 YP_014395.1 CDS LMOf2365_1801 NC_002973.6 1827840 1828364 R hypothetical protein complement(1827840..1828364) Listeria monocytogenes serotype 4b str. F2365 2799803 YP_014396.1 CDS LMOf2365_1802 NC_002973.6 1833750 1834358 R identified by match to protein family HMM PF01966; HD domain-containing protein complement(1833750..1834358) Listeria monocytogenes serotype 4b str. F2365 2799203 YP_014397.1 CDS LMOf2365_1803 NC_002973.6 1834412 1835197 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1834412..1835197 Listeria monocytogenes serotype 4b str. F2365 2798712 YP_014398.1 CDS LMOf2365_1804 NC_002973.6 1835259 1835609 D identified by similarity to GP:16414392; hypothetical protein 1835259..1835609 Listeria monocytogenes serotype 4b str. F2365 2799148 YP_014399.1 CDS pepT NC_002973.6 1835628 1836860 R catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T complement(1835628..1836860) Listeria monocytogenes serotype 4b str. F2365 2799093 YP_014400.1 CDS LMOf2365_1806 NC_002973.6 1836918 1837448 R identified by similarity to OMNI:NTL01LI1880; hypothetical protein complement(1836918..1837448) Listeria monocytogenes serotype 4b str. F2365 2799079 YP_014401.1 CDS exoA NC_002973.6 1837532 1838287 D identified by similarity to SP:P37454; match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease 1837532..1838287 Listeria monocytogenes serotype 4b str. F2365 2799080 YP_014402.1 CDS rplT NC_002973.6 1838329 1838688 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(1838329..1838688) Listeria monocytogenes serotype 4b str. F2365 2799288 YP_014403.1 CDS rpmI NC_002973.6 1838728 1838928 R identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 complement(1838728..1838928) Listeria monocytogenes serotype 4b str. F2365 2799259 YP_014404.1 CDS infC NC_002973.6 1838950 1839465 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(1838950..1839465) Listeria monocytogenes serotype 4b str. F2365 2799921 YP_014405.1 CDS LMOf2365_1811 NC_002973.6 1839491 1839730 R hypothetical protein complement(1839491..1839730) Listeria monocytogenes serotype 4b str. F2365 2797034 YP_014406.1 CDS LMOf2365_1812 NC_002973.6 1839907 1840800 R identified by similarity to GP:2879768; match to protein family HMM PF00560; internalin family protein complement(1839907..1840800) Listeria monocytogenes serotype 4b str. F2365 2799463 YP_014407.1 CDS LMOf2365_1813 NC_002973.6 1840906 1841019 R hypothetical protein complement(1840906..1841019) Listeria monocytogenes serotype 4b str. F2365 2799548 YP_014408.1 CDS rplS NC_002973.6 1841583 1841927 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(1841583..1841927) Listeria monocytogenes serotype 4b str. F2365 2799898 YP_014409.1 CDS LMOf2365_1815 NC_002973.6 1842121 1842570 D identified by match to protein family HMM PF00376; MerR family transcriptional regulator 1842121..1842570 Listeria monocytogenes serotype 4b str. F2365 2798939 YP_014410.1 CDS LMOf2365_1816 NC_002973.6 1842570 1843181 D identified by match to protein family HMM PF02525; flavodoxin-like fold domain-containing protein 1842570..1843181 Listeria monocytogenes serotype 4b str. F2365 2798874 YP_014411.1 CDS LMOf2365_1817 NC_002973.6 1843178 1843894 D identified by match to protein family HMM PF00753; metallo-beta-lactamase 1843178..1843894 Listeria monocytogenes serotype 4b str. F2365 2798868 YP_014412.1 CDS LMOf2365_1818 NC_002973.6 1843925 1844314 R identified by similarity to OMNI:NTL01LI1892; hypothetical protein complement(1843925..1844314) Listeria monocytogenes serotype 4b str. F2365 2798869 YP_014413.1 CDS trmD NC_002973.6 1844334 1845071 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(1844334..1845071) Listeria monocytogenes serotype 4b str. F2365 2798110 YP_014414.1 CDS rimM NC_002973.6 1845071 1845580 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(1845071..1845580) Listeria monocytogenes serotype 4b str. F2365 2799425 YP_014415.1 CDS LMOf2365_1821 NC_002973.6 1845599 1845985 R hypothetical protein complement(1845599..1845985) Listeria monocytogenes serotype 4b str. F2365 2798884 YP_014416.1 CDS LMOf2365_1822 NC_002973.6 1846013 1846747 R identified by match to protein family HMM PF00117; glutamine amidotransferase, class-I complement(1846013..1846747) Listeria monocytogenes serotype 4b str. F2365 2798948 YP_014417.1 CDS LMOf2365_1823 NC_002973.6 1846858 1847088 R identified by similarity to SP:O31738; hypothetical protein complement(1846858..1847088) Listeria monocytogenes serotype 4b str. F2365 2798246 YP_014418.1 CDS rpsP NC_002973.6 1847105 1847377 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(1847105..1847377) Listeria monocytogenes serotype 4b str. F2365 2798074 YP_014419.1 CDS LMOf2365_1825 NC_002973.6 1847480 1849138 R hypothetical protein complement(1847480..1849138) Listeria monocytogenes serotype 4b str. F2365 2798924 YP_014420.1 CDS LMOf2365_1827 NC_002973.6 1852098 1852994 R identified by similarity to SP:Q05918; protein-tyrosine phosphatase complement(1852098..1852994) Listeria monocytogenes serotype 4b str. F2365 2798899 YP_014421.1 CDS ffh NC_002973.6 1853137 1854489 R identified by similarity to SP:P37105; match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein complement(1853137..1854489) Listeria monocytogenes serotype 4b str. F2365 2798900 YP_014422.1 CDS LMOf2365_1829 NC_002973.6 1854502 1854834 R identified by match to protein family HMM PF04297; DNA-binding protein complement(1854502..1854834) Listeria monocytogenes serotype 4b str. F2365 2799850 YP_014423.1 CDS ftsY NC_002973.6 1854947 1855933 R identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; cell division ABC transporter substrate-binding protein FtsY complement(1854947..1855933) Listeria monocytogenes serotype 4b str. F2365 2797568 YP_014424.1 CDS smC NC_002973.6 1855948 1859508 R identified by similarity to SP:P51834; match to protein family HMM PF02463; match to protein family HMM PF02483; match to protein family HMM TIGR01612; chromosome segregation protein SMC complement(1855948..1859508) Listeria monocytogenes serotype 4b str. F2365 2797604 YP_014425.1 CDS rnc NC_002973.6 1859531 1860220 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(1859531..1860220) Listeria monocytogenes serotype 4b str. F2365 2797630 YP_014426.1 CDS LMOf2365_1833 NC_002973.6 1860238 1860330 R hypothetical protein complement(1860238..1860330) Listeria monocytogenes serotype 4b str. F2365 2797631 YP_014427.1 CDS acpP NC_002973.6 1860415 1860648 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(1860415..1860648) Listeria monocytogenes serotype 4b str. F2365 2797506 YP_014428.1 CDS fabG NC_002973.6 1860755 1861498 R identified by similarity to SP:P51831; match to protein family HMM PF00106; match to protein family HMM TIGR01830; 3-oxoacyl-ACP reductase complement(1860755..1861498) Listeria monocytogenes serotype 4b str. F2365 2797958 YP_014429.1 CDS fabD NC_002973.6 1861502 1862443 R identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128; ACP S-malonyltransferase complement(1861502..1862443) Listeria monocytogenes serotype 4b str. F2365 2797742 YP_014430.1 CDS plsX NC_002973.6 1862436 1863449 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase complement(1862436..1863449) Listeria monocytogenes serotype 4b str. F2365 2797788 YP_014431.1 CDS LMOf2365_1838 NC_002973.6 1863470 1864039 R negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria; fatty acid biosynthesis transcriptional regulator complement(1863470..1864039) Listeria monocytogenes serotype 4b str. F2365 2798189 YP_014432.1 CDS recG NC_002973.6 1864221 1866269 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(1864221..1866269) Listeria monocytogenes serotype 4b str. F2365 2798281 YP_014433.1 CDS sdhA NC_002973.6 1866262 1867152 R identified by match to protein family HMM PF03313; match to protein family HMM TIGR00718; L-serine dehydratase, iron-sulfur-dependent subunit alpha complement(1866262..1867152) Listeria monocytogenes serotype 4b str. F2365 2799774 YP_014434.1 CDS sdhB NC_002973.6 1867288 1867950 R identified by match to protein family HMM PF01842; match to protein family HMM PF03315; match to protein family HMM TIGR00719; L-serine dehydratase, iron-sulfur-dependent subunit beta complement(1867288..1867950) Listeria monocytogenes serotype 4b str. F2365 2799802 YP_014435.1 CDS LMOf2365_1842 NC_002973.6 1867990 1869648 R identified by match to protein family HMM PF02734; DAK2 domain-containing protein complement(1867990..1869648) Listeria monocytogenes serotype 4b str. F2365 2799826 YP_014436.1 CDS LMOf2365_1843 NC_002973.6 1869663 1870028 R identified by match to protein family HMM PF03780; hypothetical protein complement(1869663..1870028) Listeria monocytogenes serotype 4b str. F2365 2799775 YP_014437.1 CDS rpmB NC_002973.6 1870327 1870515 D required for 70S ribosome assembly; 50S ribosomal protein L28 1870327..1870515 Listeria monocytogenes serotype 4b str. F2365 2798334 YP_014438.1 CDS LMOf2365_1845 NC_002973.6 1870612 1871256 R identified by match to protein family HMM PF04263; kinase complement(1870612..1871256) Listeria monocytogenes serotype 4b str. F2365 2798550 YP_014439.1 CDS rpe-2 NC_002973.6 1871320 1871976 R catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase complement(1871320..1871976) Listeria monocytogenes serotype 4b str. F2365 2798586 YP_014440.1 CDS LMOf2365_1847 NC_002973.6 1871979 1872854 R EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase complement(1871979..1872854) Listeria monocytogenes serotype 4b str. F2365 2799852 YP_014441.1 CDS LMOf2365_1848 NC_002973.6 1872873 1874840 R identified by match to protein family HMM PF00069; match to protein family HMM PF03793; protein kinase complement(1872873..1874840) Listeria monocytogenes serotype 4b str. F2365 2799853 YP_014442.1 CDS LMOf2365_1849 NC_002973.6 1874837 1875595 R serine/threonine protein phosphatase complement(1874837..1875595) Listeria monocytogenes serotype 4b str. F2365 2799154 YP_014443.1 CDS sun NC_002973.6 1875618 1876952 R identified by match to protein family HMM PF01029; match to protein family HMM PF01189; match to protein family HMM TIGR00563; sun protein complement(1875618..1876952) Listeria monocytogenes serotype 4b str. F2365 2799191 YP_014444.1 CDS fmt NC_002973.6 1876953 1877891 R identified by match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM TIGR00460; methionyl-tRNA formyltransferase complement(1876953..1877891) Listeria monocytogenes serotype 4b str. F2365 2799160 YP_014445.1 CDS priA NC_002973.6 1877905 1880298 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(1877905..1880298) Listeria monocytogenes serotype 4b str. F2365 2799225 YP_014446.1 CDS coaBC NC_002973.6 1880303 1881502 R identified by match to protein family HMM PF02441; match to protein family HMM PF04127; match to protein family HMM TIGR00521; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase complement(1880303..1881502) Listeria monocytogenes serotype 4b str. F2365 2799209 YP_014447.1 CDS rpoZ NC_002973.6 1881657 1881863 R Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(1881657..1881863) Listeria monocytogenes serotype 4b str. F2365 2799054 YP_014448.1 CDS gmk NC_002973.6 1881860 1882477 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(1881860..1882477) Listeria monocytogenes serotype 4b str. F2365 2799067 YP_014449.1 CDS LMOf2365_1856 NC_002973.6 1882496 1883371 R identified by similarity to OMNI:NTL01LI1929; match to protein family HMM PF03755; match to protein family HMM TIGR00255; hypothetical protein complement(1882496..1883371) Listeria monocytogenes serotype 4b str. F2365 2799029 YP_014450.1 CDS LMOf2365_1857 NC_002973.6 1883528 1885240 D identified by similarity to GP:19110786; match to protein family HMM PF05670; match to protein family HMM PF05833; fibronectin/fibrinogen binding protein 1883528..1885240 Listeria monocytogenes serotype 4b str. F2365 2799317 YP_014451.1 CDS LMOf2365_1858 NC_002973.6 1885328 1885927 D identified by similarity to GP:4105359; short chain dehydrogenase 1885328..1885927 Listeria monocytogenes serotype 4b str. F2365 2799864 YP_014452.1 CDS pyrE NC_002973.6 1885967 1886596 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(1885967..1886596) Listeria monocytogenes serotype 4b str. F2365 2799865 YP_014453.1 CDS pyrF NC_002973.6 1886593 1887294 R type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(1886593..1887294) Listeria monocytogenes serotype 4b str. F2365 2799559 YP_014454.1 CDS pyrD NC_002973.6 1887291 1888205 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B complement(1887291..1888205) Listeria monocytogenes serotype 4b str. F2365 2799484 YP_014455.1 CDS pyrDII NC_002973.6 1888202 1888951 R identified by similarity to SP:P25983; match to protein family HMM PF00175; dihydroorotate dehydrogenase, electron transfer subunit complement(1888202..1888951) Listeria monocytogenes serotype 4b str. F2365 2797012 YP_014456.1 CDS carB NC_002973.6 1888989 1892201 R four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit complement(1888989..1892201) Listeria monocytogenes serotype 4b str. F2365 2799448 YP_014457.1 CDS carA NC_002973.6 1892194 1893285 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(1892194..1893285) Listeria monocytogenes serotype 4b str. F2365 2797633 YP_014458.1 CDS pyrC NC_002973.6 1893282 1894562 R catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase complement(1893282..1894562) Listeria monocytogenes serotype 4b str. F2365 2798983 YP_014459.1 CDS pyrB NC_002973.6 1894550 1895461 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit complement(1894550..1895461) Listeria monocytogenes serotype 4b str. F2365 2797280 YP_014460.1 CDS uraA NC_002973.6 1895542 1896828 R identified by similarity to SP:P41006; match to protein family HMM PF00860; match to protein family HMM TIGR00801; uracil permease complement(1895542..1896828) Listeria monocytogenes serotype 4b str. F2365 2798931 YP_014461.1 CDS LMOf2365_1868 NC_002973.6 1896957 1897508 R regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase complement(1896957..1897508) Listeria monocytogenes serotype 4b str. F2365 2797270 YP_014462.1 CDS LMOf2365_1869 NC_002973.6 1897739 1897969 D identified by similarity to OMNI:NTL01LI1942; hypothetical protein 1897739..1897969 Listeria monocytogenes serotype 4b str. F2365 2798245 YP_014463.1 CDS LMOf2365_1870 NC_002973.6 1898057 1898881 D identified by match to protein family HMM PF01740; STAS domain-containing protein 1898057..1898881 Listeria monocytogenes serotype 4b str. F2365 2797385 YP_014464.1 CDS LMOf2365_1871 NC_002973.6 1898899 1899810 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase D complement(1898899..1899810) Listeria monocytogenes serotype 4b str. F2365 2799442 YP_014465.1 CDS lspA NC_002973.6 1899810 1900274 R lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase complement(1899810..1900274) Listeria monocytogenes serotype 4b str. F2365 2799113 YP_014466.1 CDS LMOf2365_1873 NC_002973.6 1900356 1901639 R identified by similarity to OMNI:NTL01BH2033; match to protein family HMM PF00860; hypothetical protein complement(1900356..1901639) Listeria monocytogenes serotype 4b str. F2365 2799096 YP_014467.1 CDS LMOf2365_1874 NC_002973.6 1901813 1903183 D NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; multidrug efflux protein 1901813..1903183 Listeria monocytogenes serotype 4b str. F2365 2799104 YP_014468.1 CDS LMOf2365_1875 NC_002973.6 1903199 1904131 R identified by similarity to SP:P31304; match to protein family HMM PF01297; manganese ABC transporter complement(1903199..1904131) Listeria monocytogenes serotype 4b str. F2365 2799105 YP_014469.1 CDS LMOf2365_1876 NC_002973.6 1904128 1904970 R identified by similarity to SP:Q55282; match to protein family HMM PF00950; manganese ABC transporter permease complement(1904128..1904970) Listeria monocytogenes serotype 4b str. F2365 2799163 YP_014470.1 CDS LMOf2365_1877 NC_002973.6 1904974 1905696 R identified by similarity to SP:Q55281; match to protein family HMM PF00005; manganese ABC transporter ATP-binding protein complement(1904974..1905696) Listeria monocytogenes serotype 4b str. F2365 2799219 YP_014471.1 CDS LMOf2365_1878 NC_002973.6 1905856 1906272 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(1905856..1906272) Listeria monocytogenes serotype 4b str. F2365 2799130 YP_014472.1 CDS LMOf2365_1879 NC_002973.6 1906309 1907715 R identified by match to protein family HMM PF00595; match to protein family HMM PF01471; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxypeptidase complement(1906309..1907715) Listeria monocytogenes serotype 4b str. F2365 2799202 YP_014473.1 CDS LMOf2365_1880 NC_002973.6 1907954 1908160 R identified by match to protein family HMM PF00403; match to protein family HMM TIGR00003; heavy metal-binding protein complement(1907954..1908160) Listeria monocytogenes serotype 4b str. F2365 2799250 YP_014474.1 CDS LMOf2365_1881 NC_002973.6 1908173 1910386 R identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-translocating P-type ATPase complement(1908173..1910386) Listeria monocytogenes serotype 4b str. F2365 2799251 YP_014475.1 CDS LMOf2365_1882 NC_002973.6 1910401 1910694 R identified by similarity to OMNI:NTL01BH0559; match to protein family HMM PF02583; hypothetical protein complement(1910401..1910694) Listeria monocytogenes serotype 4b str. F2365 2797007 YP_014476.1 CDS LMOf2365_1883 NC_002973.6 1910817 1911641 R identified by match to protein family HMM PF02557; D-alanyl-D-alanine carboxypeptidase complement(1910817..1911641) Listeria monocytogenes serotype 4b str. F2365 2799917 YP_014477.1 CDS deoD NC_002973.6 1911699 1912400 R catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase complement(1911699..1912400) Listeria monocytogenes serotype 4b str. F2365 2799503 YP_014478.1 CDS LMOf2365_1885 NC_002973.6 1912412 1912645 R identified by similarity to OMNI:EF1680; hypothetical protein complement(1912412..1912645) Listeria monocytogenes serotype 4b str. F2365 2799902 YP_014479.1 CDS LMOf2365_1886 NC_002973.6 1912708 1913613 R identified by match to protein family HMM PF01408; Gfo/Idh/MocA family oxidoreductase complement(1912708..1913613) Listeria monocytogenes serotype 4b str. F2365 2799884 YP_014480.1 CDS LMOf2365_1887 NC_002973.6 1913696 1914133 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B complement(1913696..1914133) Listeria monocytogenes serotype 4b str. F2365 2798757 YP_014481.1 CDS msrA NC_002973.6 1914140 1914673 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(1914140..1914673) Listeria monocytogenes serotype 4b str. F2365 2798758 YP_014482.1 CDS LMOf2365_1889 NC_002973.6 1914709 1915323 R identified by similarity to OMNI:EF1682; hypothetical protein complement(1914709..1915323) Listeria monocytogenes serotype 4b str. F2365 2798436 YP_014483.1 CDS LMOf2365_1890 NC_002973.6 1915339 1916124 R lipase/acylhydrolase complement(1915339..1916124) Listeria monocytogenes serotype 4b str. F2365 2798302 YP_014484.1 CDS LMOf2365_1892 NC_002973.6 1916139 1916978 R identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; DegV family protein complement(1916139..1916978) Listeria monocytogenes serotype 4b str. F2365 2799812 YP_014485.1 CDS hlY-III NC_002973.6 1917157 1917789 D identified by similarity to SP:P54176; match to protein family HMM PF03006; match to protein family HMM TIGR01065; hemolysin III 1917157..1917789 Listeria monocytogenes serotype 4b str. F2365 2799769 YP_014486.1 CDS LMOf2365_1894 NC_002973.6 1917911 1918528 D identified by similarity to GP:16414480; match to protein family HMM PF00571; hypothetical protein 1917911..1918528 Listeria monocytogenes serotype 4b str. F2365 2798176 YP_014487.1 CDS LMOf2365_1895 NC_002973.6 1918541 1919353 D identified by similarity to SP:P54470; match to protein family HMM PF03618; hypothetical protein 1918541..1919353 Listeria monocytogenes serotype 4b str. F2365 2798163 YP_014488.1 CDS ppdK NC_002973.6 1919372 1922011 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 1919372..1922011 Listeria monocytogenes serotype 4b str. F2365 2797754 YP_014489.1 CDS LMOf2365_1897 NC_002973.6 1922061 1922438 R identified by similarity to OMNI:NTL01LI1969; hypothetical protein complement(1922061..1922438) Listeria monocytogenes serotype 4b str. F2365 2799713 YP_014490.1 CDS LMOf2365_1898 NC_002973.6 1922442 1923425 R identified by similarity to GP:18145220; match to protein family HMM PF06081; hypothetical protein complement(1922442..1923425) Listeria monocytogenes serotype 4b str. F2365 2799714 YP_014491.1 CDS LMOf2365_1899 NC_002973.6 1923519 1924142 R identified by match to protein family HMM PF00597; DedA family protein complement(1923519..1924142) Listeria monocytogenes serotype 4b str. F2365 2799729 YP_014492.1 CDS LMOf2365_1900 NC_002973.6 1924279 1925631 R identified by similarity to SP:P39790; serine protease complement(1924279..1925631) Listeria monocytogenes serotype 4b str. F2365 2797555 YP_014493.1 CDS LMOf2365_1901 NC_002973.6 1925886 1927397 R identified by match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase complement(1925886..1927397) Listeria monocytogenes serotype 4b str. F2365 2797552 YP_014494.1 CDS LMOf2365_1902 NC_002973.6 1927466 1928296 R identified by similarity to GP:16414487; hypothetical protein complement(1927466..1928296) Listeria monocytogenes serotype 4b str. F2365 2798942 YP_014495.1 CDS folA NC_002973.6 1928394 1928876 R identified by match to protein family HMM PF00186; dihydrofolate reductase complement(1928394..1928876) Listeria monocytogenes serotype 4b str. F2365 2798089 YP_014496.1 CDS thyA NC_002973.6 1928892 1929836 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(1928892..1929836) Listeria monocytogenes serotype 4b str. F2365 2798998 YP_014497.1 CDS LMOf2365_1905 NC_002973.6 1929849 1931741 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1929849..1931741) Listeria monocytogenes serotype 4b str. F2365 2797965 YP_014498.1 CDS fhs NC_002973.6 1931861 1933543 R catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase complement(1931861..1933543) Listeria monocytogenes serotype 4b str. F2365 2797966 YP_014499.1 CDS LMOf2365_1907 NC_002973.6 1933701 1934129 R involved in manganese homeostasis; activates the transcription of the mntABCD operon; manganese transport transcriptional regulator complement(1933701..1934129) Listeria monocytogenes serotype 4b str. F2365 2797685 YP_014500.1 CDS LMOf2365_1908 NC_002973.6 1934494 1934694 D identified by similarity to SP:P51777; match to protein family HMM PF00313; cold-shock domain-contain protein 1934494..1934694 Listeria monocytogenes serotype 4b str. F2365 2797841 YP_014501.1 CDS rnhA NC_002973.6 1934818 1935219 D identified by match to protein family HMM PF00075; ribonuclease HI 1934818..1935219 Listeria monocytogenes serotype 4b str. F2365 2797662 YP_014502.1 CDS LMOf2365_1910 NC_002973.6 1935238 1936110 R identified by similarity to SP:P54161; match to protein family HMM PF01367; match to protein family HMM PF02739; 5'-3' exonuclease complement(1935238..1936110) Listeria monocytogenes serotype 4b str. F2365 2797761 YP_014503.1 CDS rpsN NC_002973.6 1936188 1936457 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(1936188..1936457) Listeria monocytogenes serotype 4b str. F2365 2797658 YP_014504.1 CDS LMOf2365_1912 NC_002973.6 1936580 1937638 R identified by similarity to GP:4587115; match to protein family HMM PF00704; chitinase complement(1936580..1937638) Listeria monocytogenes serotype 4b str. F2365 2797697 YP_014505.1 CDS pbuX NC_002973.6 1937830 1939137 R identified by similarity to SP:P42086; match to protein family HMM PF00860; match to protein family HMM TIGR00801; xanthine permease complement(1937830..1939137) Listeria monocytogenes serotype 4b str. F2365 2797653 YP_014506.1 CDS xpt NC_002973.6 1939144 1939722 R Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase complement(1939144..1939722) Listeria monocytogenes serotype 4b str. F2365 2797715 YP_014507.1 CDS LMOf2365_1915 NC_002973.6 1939950 1941473 R identified by similarity to SP:P42663; match to protein family HMM PF02074; thermostable carboxypeptidase complement(1939950..1941473) Listeria monocytogenes serotype 4b str. F2365 2797639 YP_014508.1 CDS LMOf2365_1916 NC_002973.6 1941478 1942626 R identified by similarity to SP:P50840; match to protein family HMM PF01170; hypothetical protein complement(1941478..1942626) Listeria monocytogenes serotype 4b str. F2365 2797640 YP_014509.1 CDS LMOf2365_1916.5 NC_002973.6 1942702 1943037 R identified by similarity to PIR:AG1682; hypothetical protein complement(1942702..1943037) Listeria monocytogenes serotype 4b str. F2365 2797705 YP_014510.1 CDS LMOf2365_1917 NC_002973.6 1943206 1943547 R identified by similarity to OMNI:NTL01LI1989; match to protein family HMM PF05103; hypothetical protein complement(1943206..1943547) Listeria monocytogenes serotype 4b str. F2365 2797863 YP_014511.1 CDS LMOf2365_1918 NC_002973.6 1943679 1944224 R hypothetical protein complement(1943679..1944224) Listeria monocytogenes serotype 4b str. F2365 2797864 YP_014512.1 CDS LMOf2365_1919 NC_002973.6 1944221 1944586 R identified by similarity to SP:P50833; hypothetical protein complement(1944221..1944586) Listeria monocytogenes serotype 4b str. F2365 2798478 YP_014513.1 CDS recU NC_002973.6 1944833 1945438 D functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC; Holliday junction-specific endonuclease 1944833..1945438 Listeria monocytogenes serotype 4b str. F2365 2797902 YP_014514.1 CDS LMOf2365_1921 NC_002973.6 1945470 1947953 D identified by match to protein family HMM PF00041; match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074; penicillin-binding protein 1945470..1947953 Listeria monocytogenes serotype 4b str. F2365 2799789 YP_014515.1 CDS LMOf2365_1922 NC_002973.6 1947996 1948487 R identified by similarity to OMNI:NTL01LI1994; hypothetical protein complement(1947996..1948487) Listeria monocytogenes serotype 4b str. F2365 2798729 YP_014516.1 CDS nth NC_002973.6 1948480 1949139 R identified by similarity to SP:P39788; match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III complement(1948480..1949139) Listeria monocytogenes serotype 4b str. F2365 2798507 YP_014517.1 CDS dnaD NC_002973.6 1949150 1949869 R identified by similarity to SP:P39787; match to protein family HMM PF04271; match to protein family HMM TIGR01446; DNA replication protein DnaD complement(1949150..1949869) Listeria monocytogenes serotype 4b str. F2365 2798581 YP_014518.1 CDS asnC NC_002973.6 1950019 1951311 R catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase complement(1950019..1951311) Listeria monocytogenes serotype 4b str. F2365 2799506 YP_014519.1 CDS LMOf2365_1926 NC_002973.6 1951325 1952506 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(1951325..1952506) Listeria monocytogenes serotype 4b str. F2365 2798780 YP_014520.1 CDS LMOf2365_1927 NC_002973.6 1952529 1953035 R hypothetical protein complement(1952529..1953035) Listeria monocytogenes serotype 4b str. F2365 2799172 YP_014521.1 CDS LMOf2365_1928 NC_002973.6 1953158 1955944 R unwinds DNA; bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon complement(1953158..1955944) Listeria monocytogenes serotype 4b str. F2365 2799173 YP_014522.1 CDS panD NC_002973.6 1956041 1956424 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(1956041..1956424) Listeria monocytogenes serotype 4b str. F2365 2799497 YP_014523.1 CDS panC NC_002973.6 1956428 1957285 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(1956428..1957285) Listeria monocytogenes serotype 4b str. F2365 2799703 YP_014524.1 CDS panB NC_002973.6 1957289 1958122 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(1957289..1958122) Listeria monocytogenes serotype 4b str. F2365 2797832 YP_014525.1 CDS LMOf2365_1932 NC_002973.6 1958289 1958762 R identified by similarity to SP:P37249; bacteriocin transport accessory protein complement(1958289..1958762) Listeria monocytogenes serotype 4b str. F2365 2797837 YP_014526.1 CDS birA NC_002973.6 1958910 1959887 R identified by match to protein family HMM PF02237; match to protein family HMM PF03099; match to protein family HMM TIGR00121; birA bifunctional protein complement(1958910..1959887) Listeria monocytogenes serotype 4b str. F2365 2797811 YP_014527.1 CDS LMOf2365_1934 NC_002973.6 1959877 1961058 R catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity; tRNA CCA-pyrophosphorylase complement(1959877..1961058) Listeria monocytogenes serotype 4b str. F2365 2799628 YP_014528.1 CDS mgsA NC_002973.6 1961073 1961477 R catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase complement(1961073..1961477) Listeria monocytogenes serotype 4b str. F2365 2799655 YP_014529.1 CDS dapB NC_002973.6 1961493 1962284 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(1961493..1962284) Listeria monocytogenes serotype 4b str. F2365 2799510 YP_014530.1 CDS LMOf2365_1937 NC_002973.6 1962281 1962616 R identified by similarity to SP:P42979; match to protein family HMM PF03819; hypothetical protein complement(1962281..1962616) Listeria monocytogenes serotype 4b str. F2365 2799518 YP_014531.1 CDS LMOf2365_1938 NC_002973.6 1962757 1963623 D identified by similarity to OMNI:NTL01LI2010; match to protein family HMM PF02588; YitT family protein 1962757..1963623 Listeria monocytogenes serotype 4b str. F2365 2797027 YP_014532.1 CDS LMOf2365_1939 NC_002973.6 1963613 1964719 R identified by match to protein family HMM PF01266; oxidoreductase, FAD-binding complement(1963613..1964719) Listeria monocytogenes serotype 4b str. F2365 2799550 YP_014533.1 CDS LMOf2365_1940 NC_002973.6 1965039 1966175 D identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 1965039..1966175 Listeria monocytogenes serotype 4b str. F2365 2799551 YP_014534.1 CDS LMOf2365_1941 NC_002973.6 1966201 1967328 D identified by similarity to GP:16411365; match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 1966201..1967328 Listeria monocytogenes serotype 4b str. F2365 2799500 YP_014535.1 CDS LMOf2365_1942 NC_002973.6 1967325 1968329 D hypothetical protein 1967325..1968329 Listeria monocytogenes serotype 4b str. F2365 2799538 YP_014536.1 CDS LMOf2365_1943 NC_002973.6 1968348 1969031 D identified by match to protein family HMM PF00563; EAL domain-containing protein 1968348..1969031 Listeria monocytogenes serotype 4b str. F2365 2799493 YP_014537.1 CDS sfcA NC_002973.6 1969142 1970785 D malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 1969142..1970785 Listeria monocytogenes serotype 4b str. F2365 2799537 YP_014538.1 CDS LMOf2365_1945 NC_002973.6 1970788 1971795 D identified by similarity to GP:16266764; match to protein family HMM PF00144; peptidase 1970788..1971795 Listeria monocytogenes serotype 4b str. F2365 2799069 YP_014539.1 CDS pfl-2 NC_002973.6 1972010 1974307 D identified by similarity to SP:P09373; match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255; formate acetyltransferase 1972010..1974307 Listeria monocytogenes serotype 4b str. F2365 2799278 YP_014540.1 CDS LMOf2365_1947 NC_002973.6 1974355 1975620 R identified by similarity to OMNI:NTL01LI2019; match to protein family HMM PF03486; match to protein family HMM TIGR00275; hypothetical protein complement(1974355..1975620) Listeria monocytogenes serotype 4b str. F2365 2799211 YP_014541.1 CDS LMOf2365_1948 NC_002973.6 1975730 1976413 R identified by match to protein family HMM PF04298; hypothetical protein complement(1975730..1976413) Listeria monocytogenes serotype 4b str. F2365 2799212 YP_014542.1 CDS LMOf2365_1949 NC_002973.6 1976500 1977096 R hypothetical protein complement(1976500..1977096) Listeria monocytogenes serotype 4b str. F2365 2799185 YP_014543.1 CDS LMOf2365_1950 NC_002973.6 1977184 1977729 R hypothetical protein complement(1977184..1977729) Listeria monocytogenes serotype 4b str. F2365 2798766 YP_014544.1 CDS LMOf2365_1951 NC_002973.6 1977765 1979018 R identified by similarity to OMNI:NTL01LI2023; match to protein family HMM PF00515; hypothetical protein complement(1977765..1979018) Listeria monocytogenes serotype 4b str. F2365 2798807 YP_014545.1 CDS aroA NC_002973.6 1979150 1980436 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(1979150..1980436) Listeria monocytogenes serotype 4b str. F2365 2798808 YP_014546.1 CDS tyrA NC_002973.6 1980450 1981553 R catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase complement(1980450..1981553) Listeria monocytogenes serotype 4b str. F2365 2799220 YP_014547.1 CDS hisC NC_002973.6 1981574 1982656 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(1981574..1982656) Listeria monocytogenes serotype 4b str. F2365 2798795 YP_014548.1 CDS aroH NC_002973.6 1982656 1983030 R identified by similarity to SP:P19080; match to protein family HMM TIGR01796; chorismate mutase complement(1982656..1983030) Listeria monocytogenes serotype 4b str. F2365 2798743 YP_014549.1 CDS aroB NC_002973.6 1983027 1984124 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(1983027..1984124) Listeria monocytogenes serotype 4b str. F2365 2798754 YP_014550.1 CDS aroC NC_002973.6 1984127 1985293 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(1984127..1985293) Listeria monocytogenes serotype 4b str. F2365 2798694 YP_014551.1 CDS ndk NC_002973.6 1985497 1985940 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(1985497..1985940) Listeria monocytogenes serotype 4b str. F2365 2798703 YP_014552.1 CDS hepB NC_002973.6 1985959 1986924 R identified by similarity to SP:P55785; match to protein family HMM PF00348; heptaprenyl diphosphate synthase, component II complement(1985959..1986924) Listeria monocytogenes serotype 4b str. F2365 2798719 YP_014553.1 CDS ubiE NC_002973.6 1986935 1987648 R Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase complement(1986935..1987648) Listeria monocytogenes serotype 4b str. F2365 2798670 YP_014554.1 CDS LMOf2365_1961 NC_002973.6 1987671 1988438 R identified by similarity to SP:P31112; heptaprenyl diphosphate synthase component I complement(1987671..1988438) Listeria monocytogenes serotype 4b str. F2365 2798682 YP_014555.1 CDS folE NC_002973.6 1988495 1989064 R involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I complement(1988495..1989064) Listeria monocytogenes serotype 4b str. F2365 2799611 YP_014556.1 CDS hup NC_002973.6 1989300 1989575 R identified by similarity to SP:P02346; match to protein family HMM PF00216; DNA-binding protein HU complement(1989300..1989575) Listeria monocytogenes serotype 4b str. F2365 2798632 YP_014557.1 CDS LMOf2365_1964 NC_002973.6 1989986 1990966 R identified by similarity to SP:Q05918; protein-tyrosine phosphatase complement(1989986..1990966) Listeria monocytogenes serotype 4b str. F2365 2798658 YP_014558.1 CDS gpsA NC_002973.6 1991069 1992085 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(1991069..1992085) Listeria monocytogenes serotype 4b str. F2365 2798659 YP_014559.1 CDS engA NC_002973.6 1992108 1993418 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(1992108..1993418) Listeria monocytogenes serotype 4b str. F2365 2798643 YP_014560.1 CDS rpsA NC_002973.6 1993562 1994707 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(1993562..1994707) Listeria monocytogenes serotype 4b str. F2365 2798609 YP_014561.1 CDS cmk NC_002973.6 1995066 1995740 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(1995066..1995740) Listeria monocytogenes serotype 4b str. F2365 2798598 YP_014562.1 CDS ansA NC_002973.6 1995756 1996718 R identified by similarity to SP:P30363; match to protein family HMM PF00710; L-asparaginase complement(1995756..1996718) Listeria monocytogenes serotype 4b str. F2365 2798402 YP_014563.1 CDS LMOf2365_1970 NC_002973.6 1996799 1997533 R identified by match to protein family HMM PF01476; lysM domain-containing protein complement(1996799..1997533) Listeria monocytogenes serotype 4b str. F2365 2798622 YP_014564.1 CDS LMOf2365_1971 NC_002973.6 1997853 1999256 R identified by similarity to SP:P50729; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR00614; ATP-dependent DNA helicase RecQ complement(1997853..1999256) Listeria monocytogenes serotype 4b str. F2365 2798554 YP_014565.1 CDS LMOf2365_1972 NC_002973.6 1999253 2000260 R identified by similarity to SP:P50728; hypothetical protein complement(1999253..2000260) Listeria monocytogenes serotype 4b str. F2365 2798568 YP_014566.1 CDS LMOf2365_1973 NC_002973.6 2000415 2000639 D identified by similarity to SP:P10245; ferredoxin, 4Fe-4S 2000415..2000639 Listeria monocytogenes serotype 4b str. F2365 2798569 YP_014567.1 CDS LMOf2365_1974 NC_002973.6 2000703 2006714 R identified by match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein complement(2000703..2006714) Listeria monocytogenes serotype 4b str. F2365 2798433 YP_014568.1 CDS LMOf2365_1975 NC_002973.6 2006980 2007591 R identified by similarity to SP:P50726; hypothetical protein complement(2006980..2007591) Listeria monocytogenes serotype 4b str. F2365 2798525 YP_014569.1 CDS LMOf2365_1976 NC_002973.6 2008033 2008551 R identified by match to protein family HMM PF03061; cytosolic long-chain acyl-CoA thioester hydrolase complement(2008033..2008551) Listeria monocytogenes serotype 4b str. F2365 2798413 YP_014570.1 CDS resE NC_002973.6 2008567 2010357 R identified by similarity to SP:P35164; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase ResE complement(2008567..2010357) Listeria monocytogenes serotype 4b str. F2365 2798532 YP_014571.1 CDS resD NC_002973.6 2010458 2011174 R identified by similarity to SP:P35163; match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator ResD complement(2010458..2011174) Listeria monocytogenes serotype 4b str. F2365 2798452 YP_014572.1 CDS rluB NC_002973.6 2011357 2012091 R identified by similarity to SP:P35159; match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase B complement(2011357..2012091) Listeria monocytogenes serotype 4b str. F2365 2798489 YP_014573.1 CDS LMOf2365_1980 NC_002973.6 2012094 2012690 R identified by similarity to GP:16414565; match to protein family HMM PF04079; match to protein family HMM TIGR00281; hypothetical protein complement(2012094..2012690) Listeria monocytogenes serotype 4b str. F2365 2798498 YP_014574.1 CDS scpA NC_002973.6 2012687 2013436 R functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB; segregation and condensation protein A complement(2012687..2013436) Listeria monocytogenes serotype 4b str. F2365 2798441 YP_014575.1 CDS lysA NC_002973.6 2013452 2014762 R identified by similarity to SP:P23630; match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048; diaminopimelate decarboxylase complement(2013452..2014762) Listeria monocytogenes serotype 4b str. F2365 2798442 YP_014576.1 CDS LMOf2365_1983 NC_002973.6 2014943 2015761 R catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase complement(2014943..2015761) Listeria monocytogenes serotype 4b str. F2365 2798468 YP_014577.1 CDS deoB NC_002973.6 2015780 2016964 R catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase complement(2015780..2016964) Listeria monocytogenes serotype 4b str. F2365 2798422 YP_014578.1 CDS xerD NC_002973.6 2016993 2017886 R identified by similarity to SP:P21891; match to protein family HMM PF00589; match to protein family HMM PF02899; integrase/recombinase XerD complement(2016993..2017886) Listeria monocytogenes serotype 4b str. F2365 2798391 YP_014579.1 CDS LMOf2365_1986 NC_002973.6 2018041 2018493 R identified by match to protein family HMM PF01475; FUR family transcriptional regulator complement(2018041..2018493) Listeria monocytogenes serotype 4b str. F2365 2798394 YP_014580.1 CDS LMOf2365_1987 NC_002973.6 2018735 2019757 R identified by similarity to SP:P49937; match to protein family HMM PF01032; iron compound ABC transporter permease complement(2018735..2019757) Listeria monocytogenes serotype 4b str. F2365 2798373 YP_014581.1 CDS LMOf2365_1988 NC_002973.6 2019757 2020782 R identified by similarity to SP:P49936; match to protein family HMM PF01032; iron compound ABC transporter permease complement(2019757..2020782) Listeria monocytogenes serotype 4b str. F2365 2798381 YP_014582.1 CDS LMOf2365_1989 NC_002973.6 2020884 2021825 R identified by similarity to SP:P37580; match to protein family HMM PF01497; iron compound ABC transporter substrate-binding protein complement(2020884..2021825) Listeria monocytogenes serotype 4b str. F2365 2798360 YP_014583.1 CDS LMOf2365_1990 NC_002973.6 2021990 2022814 D identified by similarity to SP:P49938; match to protein family HMM PF00005; iron compound ABC transporter ATP-binding protein 2021990..2022814 Listeria monocytogenes serotype 4b str. F2365 2798361 YP_014584.1 CDS LMOf2365_1991 NC_002973.6 2022804 2023802 D identified by match to protein family HMM PF00070; pyridine nucleotide-disulfide oxidoreductase 2022804..2023802 Listeria monocytogenes serotype 4b str. F2365 2798382 YP_014585.1 CDS LMOf2365_1992 NC_002973.6 2023819 2024439 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2023819..2024439) Listeria monocytogenes serotype 4b str. F2365 2798349 YP_014586.1 CDS LMOf2365_1993 NC_002973.6 2024439 2025254 R ABC transporter permease complement(2024439..2025254) Listeria monocytogenes serotype 4b str. F2365 2798364 YP_014587.1 CDS LMOf2365_1994 NC_002973.6 2025251 2026138 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2025251..2026138) Listeria monocytogenes serotype 4b str. F2365 2797721 YP_014588.1 CDS LMOf2365_1995 NC_002973.6 2026612 2027169 R identified by match to protein family HMM PF00293; MutT/nudix family protein complement(2026612..2027169) Listeria monocytogenes serotype 4b str. F2365 2798370 YP_014589.1 CDS LMOf2365_1996 NC_002973.6 2027443 2028102 D identified by similarity to OMNI:NTL01LI2067; hypothetical protein 2027443..2028102 Listeria monocytogenes serotype 4b str. F2365 2798371 YP_014590.1 CDS LMOf2365_1997 NC_002973.6 2028080 2029279 D identified by similarity to GP:2429345; tellurite resistance protein 2028080..2029279 Listeria monocytogenes serotype 4b str. F2365 2797740 YP_014591.1 CDS LMOf2365_1998 NC_002973.6 2029316 2030386 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(2029316..2030386) Listeria monocytogenes serotype 4b str. F2365 2798339 YP_014592.1 CDS LMOf2365_1999 NC_002973.6 2030495 2031286 R identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase oxidoreductase complement(2030495..2031286) Listeria monocytogenes serotype 4b str. F2365 2798350 YP_014593.1 CDS LMOf2365_2000 NC_002973.6 2031291 2032211 R identified by match to protein family HMM PF00753; metallo-beta-lactamase complement(2031291..2032211) Listeria monocytogenes serotype 4b str. F2365 2798324 YP_014594.1 CDS LMOf2365_2001 NC_002973.6 2032318 2032443 R hypothetical protein complement(2032318..2032443) Listeria monocytogenes serotype 4b str. F2365 2798336 YP_014595.1 CDS zwf NC_002973.6 2032512 2033987 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2032512..2033987 Listeria monocytogenes serotype 4b str. F2365 2798337 YP_014596.1 CDS LMOf2365_2003 NC_002973.6 2034106 2034537 D hypothetical protein 2034106..2034537 Listeria monocytogenes serotype 4b str. F2365 2798327 YP_014597.1 CDS LMOf2365_2004 NC_002973.6 2034689 2035174 R hypothetical protein complement(2034689..2035174) Listeria monocytogenes serotype 4b str. F2365 2799835 YP_014598.1 CDS LMOf2365_2005 NC_002973.6 2035147 2035674 R identified by match to protein family HMM PF00583; acetyltransferase complement(2035147..2035674) Listeria monocytogenes serotype 4b str. F2365 2799848 YP_014599.1 CDS ilvD NC_002973.6 2036365 2038059 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2036365..2038059 Listeria monocytogenes serotype 4b str. F2365 2798319 YP_014600.1 CDS ilvB NC_002973.6 2038077 2039798 D identified by similarity to SP:P37251; match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR00118; acetolactate synthase large subunit 2038077..2039798 Listeria monocytogenes serotype 4b str. F2365 2798284 YP_014601.1 CDS ilvH NC_002973.6 2039799 2040290 D with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 2039799..2040290 Listeria monocytogenes serotype 4b str. F2365 2799827 YP_014602.1 CDS ilvC NC_002973.6 2040389 2041384 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2040389..2041384 Listeria monocytogenes serotype 4b str. F2365 2798202 YP_014603.1 CDS leuA NC_002973.6 2041542 2043080 D catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 2041542..2043080 Listeria monocytogenes serotype 4b str. F2365 2798203 YP_014604.1 CDS leuB NC_002973.6 2043082 2044134 D catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 2043082..2044134 Listeria monocytogenes serotype 4b str. F2365 2798283 YP_014605.1 CDS leuC NC_002973.6 2044136 2045524 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2044136..2045524 Listeria monocytogenes serotype 4b str. F2365 2797908 YP_014606.1 CDS leuD NC_002973.6 2045511 2046092 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 2045511..2046092 Listeria monocytogenes serotype 4b str. F2365 2798230 YP_014607.1 CDS ilvA NC_002973.6 2046111 2047379 D catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase 2046111..2047379 Listeria monocytogenes serotype 4b str. F2365 2797888 YP_014608.1 CDS budA NC_002973.6 2047572 2048291 D identified by match to protein family HMM PF03306; match to protein family HMM TIGR01252; alpha-acetolactate decarboxylase 2047572..2048291 Listeria monocytogenes serotype 4b str. F2365 2797892 YP_014609.1 CDS pyn NC_002973.6 2048328 2049629 R Catalyzes the reversible phosphorolysis of pyrimidines in the nucleotide synthesis salvage pathway; pyrimidine-nucleoside phosphorylase complement(2048328..2049629) Listeria monocytogenes serotype 4b str. F2365 2797898 YP_014610.1 CDS LMOf2365_2017 NC_002973.6 2049760 2050770 R identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator complement(2049760..2050770) Listeria monocytogenes serotype 4b str. F2365 2797876 YP_014611.1 CDS deoC NC_002973.6 2050850 2051521 R catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase complement(2050850..2051521) Listeria monocytogenes serotype 4b str. F2365 2797883 YP_014612.1 CDS deoR NC_002973.6 2051584 2052531 R identified by similarity to SP:P39140; match to protein family HMM PF04198; DeoR family transcriptional regulator complement(2051584..2052531) Listeria monocytogenes serotype 4b str. F2365 2797868 YP_014613.1 CDS LMOf2365_2020 NC_002973.6 2052629 2053045 R identified by match to protein family HMM PF03610; match to protein family HMM TIGR00824; PTS system mannose/fructose/sorbose family transporter subunit IIA complement(2052629..2053045) Listeria monocytogenes serotype 4b str. F2365 2797708 YP_014614.1 CDS LMOf2365_2021 NC_002973.6 2053062 2054057 R identified by similarity to GP:16414620; hypothetical protein complement(2053062..2054057) Listeria monocytogenes serotype 4b str. F2365 2797709 YP_014615.1 CDS LMOf2365_2022 NC_002973.6 2054080 2055135 R identified by similarity to OMNI:NTL01LI2094; match to protein family HMM PF01380; SIS domain-containing protein complement(2054080..2055135) Listeria monocytogenes serotype 4b str. F2365 2797859 YP_014616.1 CDS LMOf2365_2023 NC_002973.6 2055157 2055978 R identified by similarity to SP:P08188; match to protein family HMM PF03613; PTS system mannose/fructose/sorbose family transporter subunit IID complement(2055157..2055978) Listeria monocytogenes serotype 4b str. F2365 2797701 YP_014617.1 CDS LMOf2365_2024 NC_002973.6 2055959 2056777 R identified by similarity to SP:P08187; match to protein family HMM PF03609; PTS system transporter subunit IIC complement(2055959..2056777) Listeria monocytogenes serotype 4b str. F2365 2797644 YP_014618.1 CDS LMOf2365_2025 NC_002973.6 2056800 2057267 R identified by similarity to SP:P37081; match to protein family HMM PF03830; PTS system mannose/fructose/sorbose family transporter subunit IIB complement(2056800..2057267) Listeria monocytogenes serotype 4b str. F2365 2797719 YP_014619.1 CDS LMOf2365_2026 NC_002973.6 2057287 2057988 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(2057287..2057988) Listeria monocytogenes serotype 4b str. F2365 2797647 YP_014620.1 CDS LMOf2365_2027 NC_002973.6 2057990 2058721 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(2057990..2058721) Listeria monocytogenes serotype 4b str. F2365 2797648 YP_014621.1 CDS LMOf2365_2028 NC_002973.6 2058763 2058873 R hypothetical protein complement(2058763..2058873) Listeria monocytogenes serotype 4b str. F2365 2797678 YP_014622.1 CDS LMOf2365_2029 NC_002973.6 2058894 2059889 R identified by match to protein family HMM PF00248; aldo/keto reductase oxidoreductase complement(2058894..2059889) Listeria monocytogenes serotype 4b str. F2365 2797668 YP_014623.1 CDS alsS NC_002973.6 2060006 2061703 R catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase complement(2060006..2061703) Listeria monocytogenes serotype 4b str. F2365 2797800 YP_014624.1 CDS LMOf2365_2031 NC_002973.6 2061898 2063355 R identified by match to protein family HMM PF01547; ABC transporter substrate-binding protein complement(2061898..2063355) Listeria monocytogenes serotype 4b str. F2365 2797793 YP_014625.1 CDS LMOf2365_2032 NC_002973.6 2063375 2064295 R identified by match to protein family HMM PF00528; ABC transporter permease complement(2063375..2064295) Listeria monocytogenes serotype 4b str. F2365 2797728 YP_014626.1 CDS LMOf2365_2033 NC_002973.6 2064365 2065303 R identified by match to protein family HMM PF00528; ABC transporter permease complement(2064365..2065303) Listeria monocytogenes serotype 4b str. F2365 2797767 YP_014627.1 CDS LMOf2365_2034 NC_002973.6 2065407 2066891 R identified by match to protein family HMM PF00072; match to protein family HMM PF00165; DNA-binding response regulator complement(2065407..2066891) Listeria monocytogenes serotype 4b str. F2365 2797768 YP_014628.1 CDS LMOf2365_2035 NC_002973.6 2066891 2068630 R identified by match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(2066891..2068630) Listeria monocytogenes serotype 4b str. F2365 2797759 YP_014629.1 CDS LMOf2365_2036 NC_002973.6 2068687 2069298 R identified by match to protein family HMM PF04854; hypothetical protein complement(2068687..2069298) Listeria monocytogenes serotype 4b str. F2365 2797822 YP_014630.1 CDS LMOf2365_2037 NC_002973.6 2069359 2070663 R hypothetical protein complement(2069359..2070663) Listeria monocytogenes serotype 4b str. F2365 2797818 YP_014631.1 CDS LMOf2365_2038 NC_002973.6 2070667 2073324 R identified by match to protein family HMM PF01074; glycosyl hydrolase complement(2070667..2073324) Listeria monocytogenes serotype 4b str. F2365 2797724 YP_014632.1 CDS LMOf2365_2039 NC_002973.6 2073321 2073578 R hypothetical protein complement(2073321..2073578) Listeria monocytogenes serotype 4b str. F2365 2797846 YP_014633.1 CDS LMOf2365_2040 NC_002973.6 2073579 2076677 D identified by similarity to GP:15128487; match to protein family HMM PF01074; alpha-D-mannosidase 2073579..2076677 Listeria monocytogenes serotype 4b str. F2365 2797847 YP_014634.1 CDS LMOf2365_2041 NC_002973.6 2076746 2076946 R identified by match to protein family HMM PF00313; cold-shock domain-contain protein complement(2076746..2076946) Listeria monocytogenes serotype 4b str. F2365 2797831 YP_014635.1 CDS LMOf2365_2042 NC_002973.6 2077235 2077930 R identified by similarity to OMNI:NTL01LI2112; match to protein family HMM PF01569; PAP2 family protein complement(2077235..2077930) Listeria monocytogenes serotype 4b str. F2365 2797812 YP_014636.1 CDS dapF NC_002973.6 2077944 2078933 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(2077944..2078933) Listeria monocytogenes serotype 4b str. F2365 2797774 YP_014637.1 CDS ileS NC_002973.6 2079045 2081810 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase complement(2079045..2081810) Listeria monocytogenes serotype 4b str. F2365 2797681 YP_014638.1 CDS divIVA NC_002973.6 2082093 2082620 R identified by similarity to OMNI:NTL01BS01543; match to protein family HMM PF05103; cell division protein DivIVA complement(2082093..2082620) Listeria monocytogenes serotype 4b str. F2365 2797689 YP_014639.1 CDS LMOf2365_2046 NC_002973.6 2082716 2083237 R identified by match to protein family HMM PF02829; 3H domain-containing protein complement(2082716..2083237) Listeria monocytogenes serotype 4b str. F2365 2797030 YP_014640.1 CDS LMOf2365_2047 NC_002973.6 2083242 2084348 R identified by similarity to SP:P38033; match to protein family HMM PF00266; carbon-sulfur lyase complement(2083242..2084348) Listeria monocytogenes serotype 4b str. F2365 2799527 YP_014641.1 CDS nadB NC_002973.6 2084480 2085934 D catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 2084480..2085934 Listeria monocytogenes serotype 4b str. F2365 2796993 YP_014642.1 CDS nadC NC_002973.6 2085931 2086776 D catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 2085931..2086776 Listeria monocytogenes serotype 4b str. F2365 2798927 YP_014643.1 CDS nadA NC_002973.6 2086773 2087873 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 2086773..2087873 Listeria monocytogenes serotype 4b str. F2365 2798085 YP_014644.1 CDS LMOf2365_2051 NC_002973.6 2088198 2088464 R identified by similarity to OMNI:NTL01LL0091; IS3 family transposase OrfA complement(2088198..2088464) Listeria monocytogenes serotype 4b str. F2365 2798060 YP_014645.1 CDS LMOf2365_2052 NC_002973.6 2088540 2088845 R identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein complement(2088540..2088845) Listeria monocytogenes serotype 4b str. F2365 2798061 YP_014646.1 CDS LMOf2365_2053 NC_002973.6 2088873 2089358 R hypothetical protein complement(2088873..2089358) Listeria monocytogenes serotype 4b str. F2365 2798059 YP_014647.1 CDS LMOf2365_2054 NC_002973.6 2089378 2089851 R hypothetical protein complement(2089378..2089851) Listeria monocytogenes serotype 4b str. F2365 2797399 YP_014648.1 CDS LMOf2365_2055 NC_002973.6 2089917 2091911 R identified by similarity to GP:6690597; hypothetical protein complement(2089917..2091911) Listeria monocytogenes serotype 4b str. F2365 2797053 YP_014649.1 CDS LMOf2365_2056 NC_002973.6 2092046 2094127 R identified by similarity to GP:6690597; hypothetical protein complement(2092046..2094127) Listeria monocytogenes serotype 4b str. F2365 2799238 YP_014650.1 CDS LMOf2365_2057 NC_002973.6 2094391 2095929 R identified by similarity to OMNI:NTL01LM0455; hypothetical protein complement(2094391..2095929) Listeria monocytogenes serotype 4b str. F2365 2799709 YP_014651.1 CDS LMOf2365_2058 NC_002973.6 2095951 2096730 R identified by similarity to GP:9965182; methyltransferase complement(2095951..2096730) Listeria monocytogenes serotype 4b str. F2365 2799710 YP_014652.1 CDS LMOf2365_2059 NC_002973.6 2096758 2097351 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2096758..2097351) Listeria monocytogenes serotype 4b str. F2365 2798316 YP_014653.1 CDS LMOf2365_2060 NC_002973.6 2098525 2099301 R identified by match to protein family HMM PF01479; S4 domain-containing protein complement(2098525..2099301) Listeria monocytogenes serotype 4b str. F2365 2799062 YP_014654.1 CDS LMOf2365_2061 NC_002973.6 2099426 2099716 R identified by match to protein family HMM PF02325; hypothetical protein complement(2099426..2099716) Listeria monocytogenes serotype 4b str. F2365 2799131 YP_014655.1 CDS LMOf2365_2062 NC_002973.6 2099739 2100197 R identified by similarity to OMNI:NTL01BH2552; match to protein family HMM PF04472; hypothetical protein complement(2099739..2100197) Listeria monocytogenes serotype 4b str. F2365 2798794 YP_014656.1 CDS LMOf2365_2063 NC_002973.6 2100201 2100890 R identified by similarity to OMNI:NTL01LI2124; match to protein family HMM PF01168; match to protein family HMM TIGR00044; hypothetical protein complement(2100201..2100890) Listeria monocytogenes serotype 4b str. F2365 2798590 YP_014657.1 CDS ftsZ NC_002973.6 2101009 2102184 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(2101009..2102184) Listeria monocytogenes serotype 4b str. F2365 2798591 YP_014658.1 CDS ftsA NC_002973.6 2102251 2103531 R identified by similarity to SP:P28264; match to protein family HMM PF02491; match to protein family HMM TIGR01174; cell division protein FtsA complement(2102251..2103531) Listeria monocytogenes serotype 4b str. F2365 2798557 YP_014659.1 CDS LMOf2365_2066 NC_002973.6 2103897 2104709 R identified by match to protein family HMM PF03799; cell division protein FtsQ complement(2103897..2104709) Listeria monocytogenes serotype 4b str. F2365 2799843 YP_014660.1 CDS murG NC_002973.6 2104732 2105823 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(2104732..2105823) Listeria monocytogenes serotype 4b str. F2365 2798292 YP_014661.1 CDS murD NC_002973.6 2105820 2107187 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(2105820..2107187) Listeria monocytogenes serotype 4b str. F2365 2798221 YP_014662.1 CDS mraY NC_002973.6 2107329 2108291 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(2107329..2108291) Listeria monocytogenes serotype 4b str. F2365 2797144 YP_014663.1 CDS murE NC_002973.6 2108350 2109825 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(2108350..2109825) Listeria monocytogenes serotype 4b str. F2365 2797029 YP_014664.1 CDS LMOf2365_2071 NC_002973.6 2110000 2112255 R identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF03793; penicillin-binding protein complement(2110000..2112255) Listeria monocytogenes serotype 4b str. F2365 2799471 YP_014665.1 CDS LMOf2365_2072 NC_002973.6 2112252 2112614 R identified by similarity to SP:Q07867; cell division protein FtsL complement(2112252..2112614) Listeria monocytogenes serotype 4b str. F2365 2799596 YP_014666.1 CDS mraW NC_002973.6 2112631 2113569 R identified by similarity to SP:Q929X6; match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW complement(2112631..2113569) Listeria monocytogenes serotype 4b str. F2365 2798115 YP_014667.1 CDS mraZ NC_002973.6 2113582 2114013 R MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ complement(2113582..2114013) Listeria monocytogenes serotype 4b str. F2365 2798237 YP_014668.1 CDS LMOf2365_2075 NC_002973.6 2114216 2115463 R hypothetical protein complement(2114216..2115463) Listeria monocytogenes serotype 4b str. F2365 2798051 YP_014669.1 CDS LMOf2365_2076 NC_002973.6 2115581 2117395 D identified by match to protein family HMM PF00496; solute-binding family 5 protein 2115581..2117395 Listeria monocytogenes serotype 4b str. F2365 2798300 YP_014670.1 CDS panE NC_002973.6 2117703 2118596 R ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase complement(2117703..2118596) Listeria monocytogenes serotype 4b str. F2365 2798312 YP_014671.1 CDS rpmF NC_002973.6 2118746 2118919 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(2118746..2118919) Listeria monocytogenes serotype 4b str. F2365 2799624 YP_014672.1 CDS LMOf2365_2079 NC_002973.6 2119010 2119546 R identified by similarity to GP:10175205; match to protein family HMM PF02620; hypothetical protein complement(2119010..2119546) Listeria monocytogenes serotype 4b str. F2365 2798040 YP_014673.1 CDS LMOf2365_2080 NC_002973.6 2119676 2120848 D identified by match to protein family HMM PF05636; hypothetical protein 2119676..2120848 Listeria monocytogenes serotype 4b str. F2365 2798041 YP_014674.1 CDS drrC NC_002973.6 2120930 2123170 D identified by similarity to GP:1196907; match to protein family HMM PF00005; daunorubicin resistance protein 2120930..2123170 Listeria monocytogenes serotype 4b str. F2365 2798249 YP_014675.1 CDS LMOf2365_2082 NC_002973.6 2123213 2124253 R identified by similarity to OMNI:NTL01LI2144; hypothetical protein complement(2123213..2124253) Listeria monocytogenes serotype 4b str. F2365 2798981 YP_014676.1 CDS coaD NC_002973.6 2124272 2124754 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(2124272..2124754) Listeria monocytogenes serotype 4b str. F2365 2798760 YP_014677.1 CDS LMOf2365_2084 NC_002973.6 2124757 2125314 R identified by similarity to GP:19714972; match to protein family HMM PF03602; match to protein family HMM TIGR00095; methyltransferase complement(2124757..2125314) Listeria monocytogenes serotype 4b str. F2365 2798663 YP_014678.1 CDS LMOf2365_2085 NC_002973.6 2125411 2125692 R hypothetical protein complement(2125411..2125692) Listeria monocytogenes serotype 4b str. F2365 2798664 YP_014679.1 CDS LMOf2365_2086 NC_002973.6 2125723 2126172 R hypothetical protein complement(2125723..2126172) Listeria monocytogenes serotype 4b str. F2365 2799867 YP_014680.1 CDS LMOf2365_2087 NC_002973.6 2126220 2127263 R identified by match to protein family HMM PF00188; hypothetical protein complement(2126220..2127263) Listeria monocytogenes serotype 4b str. F2365 2799868 YP_014681.1 CDS ctaB NC_002973.6 2127423 2128328 R converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase complement(2127423..2128328) Listeria monocytogenes serotype 4b str. F2365 2798781 YP_014682.1 CDS LMOf2365_2089 NC_002973.6 2128564 2129481 D identified by match to protein family HMM PF02628; cytochrome oxidase assembly protein 2128564..2129481 Listeria monocytogenes serotype 4b str. F2365 2798800 YP_014683.1 CDS LMOf2365_2090 NC_002973.6 2129628 2130332 D identified by match to protein family HMM PF00520; ion transport protein 2129628..2130332 Listeria monocytogenes serotype 4b str. F2365 2799560 YP_014684.1 CDS LMOf2365_2091 NC_002973.6 2130338 2130979 R identified by match to protein family HMM PF03473; MOSC domain-containing protein complement(2130338..2130979) Listeria monocytogenes serotype 4b str. F2365 2799294 YP_014685.1 CDS LMOf2365_2092 NC_002973.6 2130998 2131615 R hypothetical protein complement(2130998..2131615) Listeria monocytogenes serotype 4b str. F2365 2799320 YP_014686.1 CDS LMOf2365_2093 NC_002973.6 2131628 2133253 R identified by similarity to SP:P12376; match to protein family HMM PF04234; match to protein family HMM PF05425; copper resistance domain-containing protein complement(2131628..2133253) Listeria monocytogenes serotype 4b str. F2365 2799511 YP_014687.1 CDS LMOf2365_2094 NC_002973.6 2133393 2133584 D identified by similarity to OMNI:NTL01LI2156; hypothetical protein 2133393..2133584 Listeria monocytogenes serotype 4b str. F2365 2799512 YP_014688.1 CDS mscL NC_002973.6 2133646 2134032 D homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 2133646..2134032 Listeria monocytogenes serotype 4b str. F2365 2799542 YP_014689.1 CDS LMOf2365_2096 NC_002973.6 2134167 2134559 R identified by similarity to OMNI:NTL01LI2158; hypothetical protein complement(2134167..2134559) Listeria monocytogenes serotype 4b str. F2365 2798437 YP_014690.1 CDS LMOf2365_2097 NC_002973.6 2134604 2134813 R identified by similarity to OMNI:NTL01LI2159; hypothetical protein complement(2134604..2134813) Listeria monocytogenes serotype 4b str. F2365 2798570 YP_014691.1 CDS cbH NC_002973.6 2134964 2135941 R identified by similarity to SP:Q06115; match to protein family HMM PF02275; choloylglycine hydrolase complement(2134964..2135941) Listeria monocytogenes serotype 4b str. F2365 2798482 YP_014692.1 CDS groEL NC_002973.6 2136196 2137824 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL complement(2136196..2137824) Listeria monocytogenes serotype 4b str. F2365 2798180 YP_014693.1 CDS groES NC_002973.6 2137858 2138142 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(2137858..2138142) Listeria monocytogenes serotype 4b str. F2365 2798416 YP_014694.1 CDS LMOf2365_2101 NC_002973.6 2138240 2138344 D hypothetical protein 2138240..2138344 Listeria monocytogenes serotype 4b str. F2365 2798354 YP_014695.1 CDS LMOf2365_2102 NC_002973.6 2138377 2139063 D identified by match to protein family HMM PF02517; CAAX amino terminal protease 2138377..2139063 Listeria monocytogenes serotype 4b str. F2365 2798355 YP_014696.1 CDS LMOf2365_2103 NC_002973.6 2139065 2139262 D identified by similarity to OMNI:NTL01LI2163; hypothetical protein 2139065..2139262 Listeria monocytogenes serotype 4b str. F2365 2797492 YP_014697.1 CDS LMOf2365_2104 NC_002973.6 2139296 2139943 R modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex complement(2139296..2139943) Listeria monocytogenes serotype 4b str. F2365 2797743 YP_014698.1 CDS LMOf2365_2105 NC_002973.6 2140253 2142205 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2140253..2142205 Listeria monocytogenes serotype 4b str. F2365 2797496 YP_014699.1 CDS LMOf2365_2106 NC_002973.6 2142230 2143189 D hypothetical protein 2142230..2143189 Listeria monocytogenes serotype 4b str. F2365 2797440 YP_014700.1 CDS LMOf2365_2107 NC_002973.6 2143734 2144756 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease complement(2143734..2144756) Listeria monocytogenes serotype 4b str. F2365 2797482 YP_014701.1 CDS rimI NC_002973.6 2144753 2145208 R identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575; ribosomal-protein-alanine acetyltransferase complement(2144753..2145208) Listeria monocytogenes serotype 4b str. F2365 2797483 YP_014702.1 CDS LMOf2365_2109 NC_002973.6 2145205 2145897 R identified by similarity to OMNI:NTL01LI2169; match to protein family HMM PF00814; hypothetical protein complement(2145205..2145897) Listeria monocytogenes serotype 4b str. F2365 2797466 YP_014703.1 CDS LMOf2365_2110 NC_002973.6 2145894 2146355 R identified by similarity to OMNI:NTL01LI2170; match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein complement(2145894..2146355) Listeria monocytogenes serotype 4b str. F2365 2797220 YP_014704.1 CDS LMOf2365_2111 NC_002973.6 2146460 2147602 R lipoprotein complement(2146460..2147602) Listeria monocytogenes serotype 4b str. F2365 2797261 YP_014705.1 CDS LMOf2365_2112 NC_002973.6 2147739 2148119 R identified by similarity to OMNI:NTL01LI2172; lipoprotein complement(2147739..2148119) Listeria monocytogenes serotype 4b str. F2365 2797249 YP_014706.1 CDS LMOf2365_2113 NC_002973.6 2148214 2148570 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(2148214..2148570) Listeria monocytogenes serotype 4b str. F2365 2797178 YP_014707.1 CDS LMOf2365_2114 NC_002973.6 2148560 2148949 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(2148560..2148949) Listeria monocytogenes serotype 4b str. F2365 2797179 YP_014708.1 CDS LMOf2365_2115 NC_002973.6 2149055 2149681 R identified by similarity to OMNI:NTL01LI2175; hypothetical protein complement(2149055..2149681) Listeria monocytogenes serotype 4b str. F2365 2797199 YP_014709.1 CDS LMOf2365_2117 NC_002973.6 2150838 2152526 R identified by match to protein family HMM PF00746; match to protein family HMM PF05738; match to protein family HMM TIGR01167; cell wall surface anchor family protein complement(2150838..2152526) Listeria monocytogenes serotype 4b str. F2365 2797609 YP_014710.1 CDS LMOf2365_2118 NC_002973.6 2152623 2153894 R identified by match to protein family HMM PF01381; DNA-binding protein complement(2152623..2153894) Listeria monocytogenes serotype 4b str. F2365 2797610 YP_014711.1 CDS LMOf2365_2119 NC_002973.6 2154530 2155861 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(2154530..2155861) Listeria monocytogenes serotype 4b str. F2365 2797572 YP_014712.1 CDS LMOf2365_2120 NC_002973.6 2155871 2156461 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2155871..2156461) Listeria monocytogenes serotype 4b str. F2365 2797581 YP_014713.1 CDS LMOf2365_2121 NC_002973.6 2156572 2157615 R identified by similarity to GP:2853612; lipase complement(2156572..2157615) Listeria monocytogenes serotype 4b str. F2365 2797585 YP_014714.1 CDS argG NC_002973.6 2157848 2159062 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 2157848..2159062 Listeria monocytogenes serotype 4b str. F2365 2797067 YP_014715.1 CDS argH NC_002973.6 2159066 2160436 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2159066..2160436 Listeria monocytogenes serotype 4b str. F2365 2797120 YP_014716.1 CDS LMOf2365_2124 NC_002973.6 2160604 2162127 D identified by similarity to SP:P54417; match to protein family HMM PF02028; match to protein family HMM TIGR00842; glycine betaine transporter 2160604..2162127 Listeria monocytogenes serotype 4b str. F2365 2797127 YP_014717.1 CDS LMOf2365_2125 NC_002973.6 2162171 2162368 R hypothetical protein complement(2162171..2162368) Listeria monocytogenes serotype 4b str. F2365 2797128 YP_014718.1 CDS LMOf2365_2126 NC_002973.6 2162372 2163022 R identified by match to protein family HMM PF00596; hypothetical protein complement(2162372..2163022) Listeria monocytogenes serotype 4b str. F2365 2797135 YP_014719.1 CDS LMOf2365_2127 NC_002973.6 2163024 2163956 R identified by match to protein family HMM PF00294; carbohydrate kinase complement(2163024..2163956) Listeria monocytogenes serotype 4b str. F2365 2797140 YP_014720.1 CDS LMOf2365_2128 NC_002973.6 2163974 2165323 R identified by similarity to SP:P37189; match to protein family HMM PF03611; PTS system galactitol-specific transporter subunit IIC complement(2163974..2165323) Listeria monocytogenes serotype 4b str. F2365 2797148 YP_014721.1 CDS LMOf2365_2129 NC_002973.6 2165351 2165626 R identified by similarity to SP:P37188; match to protein family HMM PF02302; PTS system galactitol-specific enzyme IIB component complement(2165351..2165626) Listeria monocytogenes serotype 4b str. F2365 2797152 YP_014722.1 CDS LMOf2365_2130 NC_002973.6 2165632 2166099 R identified by similarity to SP:P37187; match to protein family HMM PF00359; PTS system galactitol-specific enzyme IIA component complement(2165632..2166099) Listeria monocytogenes serotype 4b str. F2365 2797157 YP_014723.1 CDS LMOf2365_2131 NC_002973.6 2166107 2168113 R identified by similarity to OMNI:NTL01LI2189; match to protein family HMM PF00874; hypothetical protein complement(2166107..2168113) Listeria monocytogenes serotype 4b str. F2365 2797158 YP_014724.1 CDS LMOf2365_2132 NC_002973.6 2168294 2169739 R identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator complement(2168294..2169739) Listeria monocytogenes serotype 4b str. F2365 2797174 YP_014725.1 CDS LMOf2365_2133 NC_002973.6 2169863 2170750 D with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 2169863..2170750 Listeria monocytogenes serotype 4b str. F2365 2797184 YP_014726.1 CDS LMOf2365_2134 NC_002973.6 2170752 2171318 D with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT 2170752..2171318 Listeria monocytogenes serotype 4b str. F2365 2797194 YP_014727.1 CDS eutD NC_002973.6 2171357 2172334 R in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase complement(2171357..2172334) Listeria monocytogenes serotype 4b str. F2365 2797206 YP_014728.1 CDS LMOf2365_2136 NC_002973.6 2172654 2172881 D identified by similarity to GP:19917531; match to protein family HMM PF04023; ferrous iron transport protein A 2172654..2172881 Listeria monocytogenes serotype 4b str. F2365 2797210 YP_014729.1 CDS feoB NC_002973.6 2172878 2174872 D identified by match to protein family HMM PF02421; match to protein family HMM TIGR00231; match to protein family HMM TIGR00437; ferrous iron transport protein B 2172878..2174872 Listeria monocytogenes serotype 4b str. F2365 2797227 YP_014730.1 CDS LMOf2365_2138 NC_002973.6 2174879 2175061 D identified by similarity to GP:16414723; hypothetical protein 2174879..2175061 Listeria monocytogenes serotype 4b str. F2365 2797228 YP_014731.1 CDS LMOf2365_2139 NC_002973.6 2175091 2175945 R identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase complement(2175091..2175945) Listeria monocytogenes serotype 4b str. F2365 2797237 YP_014732.1 CDS LMOf2365_2140 NC_002973.6 2176198 2176959 D identified by match to protein family HMM PF00455; DeoR family transcriptional regulator 2176198..2176959 Listeria monocytogenes serotype 4b str. F2365 2797241 YP_014733.1 CDS nagA-2 NC_002973.6 2176965 2178098 D identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221; N-acetylglucosamine-6-phosphate deacetylase 2176965..2178098 Listeria monocytogenes serotype 4b str. F2365 2797246 YP_014734.1 CDS LMOf2365_2142 NC_002973.6 2178140 2178949 D identified by match to protein family HMM PF00561; alpha/beta fold family hydrolase 2178140..2178949 Listeria monocytogenes serotype 4b str. F2365 2797257 YP_014735.1 CDS manA NC_002973.6 2179055 2180011 R identified by match to protein family HMM PF01238; match to protein family HMM TIGR00218; mannose-6-phosphate isomerase complement(2179055..2180011) Listeria monocytogenes serotype 4b str. F2365 2797433 YP_014736.1 CDS LMOf2365_2144 NC_002973.6 2180091 2180822 R identified by similarity to OMNI:SP1710; match to protein family HMM PF00881; nitroreductase complement(2180091..2180822) Listeria monocytogenes serotype 4b str. F2365 2797447 YP_014737.1 CDS LMOf2365_2145 NC_002973.6 2180945 2181175 D identified by similarity to GP:16414730; DNA-binding protein 2180945..2181175 Listeria monocytogenes serotype 4b str. F2365 2797448 YP_014738.1 CDS LMOf2365_2146 NC_002973.6 2181259 2182014 D identified by similarity to SP:P39645; heme peroxidase 2181259..2182014 Listeria monocytogenes serotype 4b str. F2365 2797453 YP_014739.1 CDS LMOf2365_2147 NC_002973.6 2182210 2182977 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2182210..2182977 Listeria monocytogenes serotype 4b str. F2365 2797459 YP_014740.1 CDS LMOf2365_2148 NC_002973.6 2182964 2184904 D identified by match to protein family HMM PF02687; ABC transporter permease 2182964..2184904 Listeria monocytogenes serotype 4b str. F2365 2797475 YP_014741.1 CDS LMOf2365_2149 NC_002973.6 2184942 2185775 R identified by similarity to GP:16414734; hypothetical protein complement(2184942..2185775) Listeria monocytogenes serotype 4b str. F2365 2797490 YP_014742.1 CDS LMOf2365_2150 NC_002973.6 2185827 2186288 D identified by similarity to OMNI:EF0824; match to protein family HMM PF00583; acetyltransferase 2185827..2186288 Listeria monocytogenes serotype 4b str. F2365 2797504 YP_014743.1 CDS glmM NC_002973.6 2186323 2187675 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(2186323..2187675) Listeria monocytogenes serotype 4b str. F2365 2797505 YP_014744.1 CDS LMOf2365_2152 NC_002973.6 2187925 2189286 R hypothetical protein complement(2187925..2189286) Listeria monocytogenes serotype 4b str. F2365 2797513 YP_014745.1 CDS LMOf2365_2153 NC_002973.6 2189283 2190104 R identified by similarity to OMNI:NTL01LI2211; match to protein family HMM PF02457; match to protein family HMM TIGR00159; hypothetical protein complement(2189283..2190104) Listeria monocytogenes serotype 4b str. F2365 2797517 YP_014746.1 CDS LMOf2365_2155 NC_002973.6 2191682 2193943 R identified by match to protein family HMM PF03632; match to protein family HMM PF03633; match to protein family HMM PF03636; maltose phosphorylase complement(2191682..2193943) Listeria monocytogenes serotype 4b str. F2365 2797526 YP_014747.1 CDS LMOf2365_2156 NC_002973.6 2193959 2194792 R identified by similarity to OMNI:NTL01LI2213; hypothetical protein complement(2193959..2194792) Listeria monocytogenes serotype 4b str. F2365 2797530 YP_014748.1 CDS LMOf2365_2157 NC_002973.6 2194820 2195671 R identified by similarity to SP:Q04699; match to protein family HMM PF00528; maltose/maltodextrin ABC transporter permease complement(2194820..2195671) Listeria monocytogenes serotype 4b str. F2365 2797535 YP_014749.1 CDS LMOf2365_2158 NC_002973.6 2195672 2196979 R identified by similarity to SP:Q04698; match to protein family HMM PF00528; match to protein family HMM PF05154; maltose/maltodextrin ABC transporter permease complement(2195672..2196979) Listeria monocytogenes serotype 4b str. F2365 2797539 YP_014750.1 CDS LMOf2365_2159 NC_002973.6 2197067 2198326 R identified by similarity to SP:P02928; match to protein family HMM PF01547; maltose/maltodextrin ABC transporter maltose/maltodextrin-binding protein complement(2197067..2198326) Listeria monocytogenes serotype 4b str. F2365 2797549 YP_014751.1 CDS nplT NC_002973.6 2198539 2200314 R identified by similarity to SP:P38940; match to protein family HMM PF00128; match to protein family HMM PF02903; neopullulanase complement(2198539..2200314) Listeria monocytogenes serotype 4b str. F2365 2797550 YP_014752.1 CDS LMOf2365_2161 NC_002973.6 2200572 2201207 D identified by match to protein family HMM PF02517; CAAX amino terminal protease 2200572..2201207 Listeria monocytogenes serotype 4b str. F2365 2797557 YP_014753.1 CDS LMOf2365_2162 NC_002973.6 2201243 2202208 R identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator complement(2201243..2202208) Listeria monocytogenes serotype 4b str. F2365 2798615 YP_014754.1 CDS LMOf2365_2163 NC_002973.6 2202347 2202583 R identified by similarity to OMNI:NTL01LI2220; hypothetical protein complement(2202347..2202583) Listeria monocytogenes serotype 4b str. F2365 2797911 YP_014755.1 CDS LMOf2365_2164 NC_002973.6 2203183 2205006 R hypothetical protein complement(2203183..2205006) Listeria monocytogenes serotype 4b str. F2365 2797561 YP_014756.1 CDS LMOf2365_2165 NC_002973.6 2206015 2206704 R identified by similarity to OMNI:NTL01LI2222; hypothetical protein complement(2206015..2206704) Listeria monocytogenes serotype 4b str. F2365 2797944 YP_014757.1 CDS LMOf2365_2166 NC_002973.6 2207183 2207893 D identified by similarity to OMNI:NTL01LI2223; hypothetical protein 2207183..2207893 Listeria monocytogenes serotype 4b str. F2365 2797757 YP_014758.1 CDS LMOf2365_2167 NC_002973.6 2207923 2208822 R identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; hypothetical protein complement(2207923..2208822) Listeria monocytogenes serotype 4b str. F2365 2797745 YP_014759.1 CDS LMOf2365_2168 NC_002973.6 2208839 2209693 R identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; fructose-bisphosphate aldolase complement(2208839..2209693) Listeria monocytogenes serotype 4b str. F2365 2797851 YP_014760.1 CDS LMOf2365_2170 NC_002973.6 2211631 2213088 R identified by match to protein family HMM PF00874; match to protein family HMM TIGR01199; DNA-binding PRD domain-containing protein complement(2211631..2213088) Listeria monocytogenes serotype 4b str. F2365 2798154 YP_014761.1 CDS LMOf2365_2171 NC_002973.6 2213284 2214186 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2213284..2214186 Listeria monocytogenes serotype 4b str. F2365 2798155 YP_014762.1 CDS LMOf2365_2172 NC_002973.6 2214179 2215414 D ABC transporter permease 2214179..2215414 Listeria monocytogenes serotype 4b str. F2365 2798174 YP_014763.1 CDS LMOf2365_2173 NC_002973.6 2215431 2215904 D identified by match to protein family HMM PF00583; acetyltransferase 2215431..2215904 Listeria monocytogenes serotype 4b str. F2365 2798213 YP_014764.1 CDS LMOf2365_2174 NC_002973.6 2216494 2217159 R identified by similarity to OMNI:NTL01LI2233; hypothetical protein complement(2216494..2217159) Listeria monocytogenes serotype 4b str. F2365 2798278 YP_014765.1 CDS LMOf2365_2175 NC_002973.6 2217400 2219115 D mannose-6-phosphate isomerase 2217400..2219115 Listeria monocytogenes serotype 4b str. F2365 2798260 YP_014766.1 CDS LMOf2365_2176 NC_002973.6 2219154 2219888 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(2219154..2219888) Listeria monocytogenes serotype 4b str. F2365 2798274 YP_014767.1 CDS LMOf2365_2177 NC_002973.6 2220003 2221019 R hypothetical protein complement(2220003..2221019) Listeria monocytogenes serotype 4b str. F2365 2799776 YP_014768.1 CDS LMOf2365_2178 NC_002973.6 2221088 2221942 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(2221088..2221942) Listeria monocytogenes serotype 4b str. F2365 2799777 YP_014769.1 CDS LMOf2365_2179 NC_002973.6 2222048 2223055 D identified by match to protein family HMM PF03601; hypothetical protein 2222048..2223055 Listeria monocytogenes serotype 4b str. F2365 2798315 YP_014770.1 CDS LMOf2365_2180 NC_002973.6 2223111 2223752 D hypothetical protein 2223111..2223752 Listeria monocytogenes serotype 4b str. F2365 2798323 YP_014771.1 CDS LMOf2365_2181 NC_002973.6 2223802 2224119 R identified by similarity to OMNI:NTL01LI2238; match to protein family HMM PF03819; hypothetical protein complement(2223802..2224119) Listeria monocytogenes serotype 4b str. F2365 2798345 YP_014772.1 CDS LMOf2365_2182 NC_002973.6 2224318 2224494 D hypothetical protein 2224318..2224494 Listeria monocytogenes serotype 4b str. F2365 2798366 YP_014773.1 CDS LMOf2365_2183 NC_002973.6 2224537 2224836 R identified by similarity to OMNI:EF0964; match to protein family HMM PF03819; hypothetical protein complement(2224537..2224836) Listeria monocytogenes serotype 4b str. F2365 2798377 YP_014774.1 CDS LMOf2365_2184 NC_002973.6 2224943 2225269 R identified by similarity to SP:P80579; thioredoxin complement(2224943..2225269) Listeria monocytogenes serotype 4b str. F2365 2798378 YP_014775.1 CDS LMOf2365_2185 NC_002973.6 2225266 2225703 R An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin complement(2225266..2225703) Listeria monocytogenes serotype 4b str. F2365 2798387 YP_014776.1 CDS nrdF NC_002973.6 2225700 2226749 R B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta complement(2225700..2226749) Listeria monocytogenes serotype 4b str. F2365 2798397 YP_014777.1 CDS nrdA NC_002973.6 2226805 2229096 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(2226805..2229096) Listeria monocytogenes serotype 4b str. F2365 2798407 YP_014778.1 CDS LMOf2365_2188 NC_002973.6 2229632 2229973 D identified by similarity to OMNI:NTL01LI2695; match to protein family HMM TIGR01655; hypothetical protein 2229632..2229973 Listeria monocytogenes serotype 4b str. F2365 2798426 YP_014779.1 CDS LMOf2365_2189 NC_002973.6 2230027 2231928 R identified by match to protein family HMM PF00753; metallo-beta-lactamase complement(2230027..2231928) Listeria monocytogenes serotype 4b str. F2365 2798448 YP_014780.1 CDS LMOf2365_2190 NC_002973.6 2232059 2232244 R identified by similarity to SP:P70964; match to protein family HMM PF05532; hypothetical protein complement(2232059..2232244) Listeria monocytogenes serotype 4b str. F2365 2798458 YP_014781.1 CDS LMOf2365_2191 NC_002973.6 2232338 2233387 R identified by match to protein family HMM PF01408; match to protein family HMM PF02894; Gfo/Idh/MocA family oxidoreductase complement(2232338..2233387) Listeria monocytogenes serotype 4b str. F2365 2798459 YP_014782.1 CDS LMOf2365_2192 NC_002973.6 2233410 2234378 R identified by similarity to OMNI:NTL01LM2151; match to protein family HMM PF01261; hypothetical protein complement(2233410..2234378) Listeria monocytogenes serotype 4b str. F2365 2798472 YP_014783.1 CDS LMOf2365_2193 NC_002973.6 2234381 2235103 R identified by similarity to OMNI:NTL01LI2249; hypothetical protein complement(2234381..2235103) Listeria monocytogenes serotype 4b str. F2365 2798493 YP_014784.1 CDS LMOf2365_2194 NC_002973.6 2235105 2235845 R identified by similarity to OMNI:NTL01LI2250; hypothetical protein complement(2235105..2235845) Listeria monocytogenes serotype 4b str. F2365 2798515 YP_014785.1 CDS LMOf2365_2195 NC_002973.6 2235861 2236937 R identified by similarity to OMNI:SA0196; match to protein family HMM PF01408; match to protein family HMM PF02894; Gfo/Idh/MocA family oxidoreductase complement(2235861..2236937) Listeria monocytogenes serotype 4b str. F2365 2798528 YP_014786.1 CDS LMOf2365_2196 NC_002973.6 2237012 2237890 R identified by match to protein family HMM PF00165; match to protein family HMM PF02311; AraC family transcriptional regulator complement(2237012..2237890) Listeria monocytogenes serotype 4b str. F2365 2798537 YP_014787.1 CDS LMOf2365_2197 NC_002973.6 2237960 2238655 R identified by similarity to OMNI:NTL01LI2253; hypothetical protein complement(2237960..2238655) Listeria monocytogenes serotype 4b str. F2365 2798538 YP_014788.1 CDS LMOf2365_2198 NC_002973.6 2238908 2239579 R identified by similarity to OMNI:NTL01LI2254; match to protein family HMM PF00027; cyclic nucleotide-binding protein complement(2238908..2239579) Listeria monocytogenes serotype 4b str. F2365 2798549 YP_014789.1 CDS LMOf2365_2199 NC_002973.6 2239644 2240261 R identified by match to protein family HMM PF00753; metallo-beta-lactamase complement(2239644..2240261) Listeria monocytogenes serotype 4b str. F2365 2798559 YP_014790.1 CDS LMOf2365_2200 NC_002973.6 2240392 2240781 D identified by similarity to SP:Q60003; match to protein family HMM PF00903; lactoylglutathione lyase 2240392..2240781 Listeria monocytogenes serotype 4b str. F2365 2798588 YP_014791.1 CDS LMOf2365_2201 NC_002973.6 2240804 2240962 D hypothetical protein 2240804..2240962 Listeria monocytogenes serotype 4b str. F2365 2799483 YP_014792.1 CDS LMOf2365_2202 NC_002973.6 2241008 2241937 R identified by similarity to OMNI:SP0419; match to protein family HMM PF03060; enoyl-ACP reductase complement(2241008..2241937) Listeria monocytogenes serotype 4b str. F2365 2799554 YP_014793.1 CDS LMOf2365_2203 NC_002973.6 2241959 2243182 R identified by similarity to GP:1235993; match to protein family HMM PF00083; major facilitator family transporter complement(2241959..2243182) Listeria monocytogenes serotype 4b str. F2365 2799555 YP_014794.1 CDS pct NC_002973.6 2243179 2244762 R identified by similarity to GP:7242549; match to protein family HMM PF01144; propionate CoA-transferase complement(2243179..2244762) Listeria monocytogenes serotype 4b str. F2365 2799333 YP_014795.1 CDS LMOf2365_2205 NC_002973.6 2244992 2246299 R identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199; sigma-54 dependent transcriptional regulator complement(2244992..2246299) Listeria monocytogenes serotype 4b str. F2365 2799307 YP_014796.1 CDS LMOf2365_2206 NC_002973.6 2246465 2247538 R identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase complement(2246465..2247538) Listeria monocytogenes serotype 4b str. F2365 2799283 YP_014797.1 CDS fabG NC_002973.6 2247717 2248478 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(2247717..2248478) Listeria monocytogenes serotype 4b str. F2365 2799282 YP_014798.1 CDS LMOf2365_2208 NC_002973.6 2248662 2249225 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2248662..2249225 Listeria monocytogenes serotype 4b str. F2365 2799255 YP_014799.1 CDS LMOf2365_2209 NC_002973.6 2249331 2249678 D hypothetical protein 2249331..2249678 Listeria monocytogenes serotype 4b str. F2365 2799256 YP_014800.1 CDS LMOf2365_2210 NC_002973.6 2249718 2254307 R identified by match to protein family HMM PF00746; match to protein family HMM PF05737; match to protein family HMM PF05738; match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein complement(2249718..2254307) Listeria monocytogenes serotype 4b str. F2365 2799106 YP_014801.1 CDS LMOf2365_2211 NC_002973.6 2254576 2259669 R identified by match to protein family HMM PF00746; match to protein family HMM PF05737; match to protein family HMM PF05738; match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein complement(2254576..2259669) Listeria monocytogenes serotype 4b str. F2365 2799074 YP_014802.1 CDS LMOf2365_2212 NC_002973.6 2259889 2263344 R identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein complement(2259889..2263344) Listeria monocytogenes serotype 4b str. F2365 2799048 YP_014803.1 CDS LMOf2365_2213 NC_002973.6 2263537 2264013 R identified by similarity to OMNI:NTL01LI2269; match to protein family HMM PF05565; hypothetical protein complement(2263537..2264013) Listeria monocytogenes serotype 4b str. F2365 2799187 YP_014804.1 CDS LMOf2365_2214 NC_002973.6 2264074 2264814 R identified by similarity to GP:16411651; hypothetical protein complement(2264074..2264814) Listeria monocytogenes serotype 4b str. F2365 2799119 YP_014805.1 CDS LMOf2365_2215 NC_002973.6 2264818 2265597 R identified by similarity to SP:P23878; match to protein family HMM PF00005; iron compound ABC transporter ATP-binding protein complement(2264818..2265597) Listeria monocytogenes serotype 4b str. F2365 2799120 YP_014806.1 CDS LMOf2365_2216 NC_002973.6 2265578 2266567 R identified by similarity to SP:P49937; match to protein family HMM PF01032; iron compound ABC transporter permease complement(2265578..2266567) Listeria monocytogenes serotype 4b str. F2365 2798812 YP_014807.1 CDS LMOf2365_2217 NC_002973.6 2266557 2267429 R identified by similarity to SP:P40409; match to protein family HMM PF01497; iron compound ABC transporter substrate-binding protein complement(2266557..2267429) Listeria monocytogenes serotype 4b str. F2365 2798786 YP_014808.1 CDS LMOf2365_2218 NC_002973.6 2267516 2269225 R identified by similarity to OMNI:NTL01LI2274; match to protein family HMM PF05031; hypothetical protein complement(2267516..2269225) Listeria monocytogenes serotype 4b str. F2365 2798772 YP_014809.1 CDS LMOf2365_2219 NC_002973.6 2269238 2269864 R identified by similarity to GP:16414802; match to protein family HMM PF05031; hypothetical protein complement(2269238..2269864) Listeria monocytogenes serotype 4b str. F2365 2798748 YP_014810.1 CDS LMOf2365_2220 NC_002973.6 2270075 2270335 R identified by similarity to OMNI:NTL01LI2276; hypothetical protein complement(2270075..2270335) Listeria monocytogenes serotype 4b str. F2365 2798735 YP_014811.1 CDS pepF NC_002973.6 2270634 2272439 R identified by similarity to SP:P54124; match to protein family HMM PF01432; match to protein family HMM TIGR00181; oligoendopeptidase F complement(2270634..2272439) Listeria monocytogenes serotype 4b str. F2365 2798736 YP_014812.1 CDS LMOf2365_2222 NC_002973.6 2272512 2273597 R identified by similarity to GP:3211759; match to protein family HMM PF06054; CoiA-like family protein complement(2272512..2273597) Listeria monocytogenes serotype 4b str. F2365 2798723 YP_014813.1 CDS LMOf2365_2223 NC_002973.6 2273753 2274406 R enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence; adaptor protein complement(2273753..2274406) Listeria monocytogenes serotype 4b str. F2365 2798697 YP_014814.1 CDS spxA NC_002973.6 2274638 2275033 R the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters; in Bacillus subtilis this protein is a substrate for ClpXP protease; blocks transcription of the competence regulatory gene encoded by the srf operon; regulates a number of genes involved in thiol homeostasis including trxA and trxB; monomeric member of ArsC family of proteins; does not bind DNA; contains a disulfide bond between C10 and C13 which may sense disulfide stress; Spx family transcriptional regulator complement(2274638..2275033) Listeria monocytogenes serotype 4b str. F2365 2798675 YP_014815.1 CDS LMOf2365_2225 NC_002973.6 2275353 2276321 R identified by similarity to SP:P24137; match to protein family HMM PF00005; oligopeptide ABC transporter ATP-binding protein complement(2275353..2276321) Listeria monocytogenes serotype 4b str. F2365 2798652 YP_014816.1 CDS LMOf2365_2226 NC_002973.6 2276318 2277394 R identified by similarity to SP:P24136; match to protein family HMM PF00005; match to protein family HMM TIGR01727; oligopeptide ABC transporter ATP-binding protein complement(2276318..2277394) Listeria monocytogenes serotype 4b str. F2365 2798637 YP_014817.1 CDS LMOf2365_2227 NC_002973.6 2277412 2278446 R identified by similarity to SP:P24139; match to protein family HMM PF00528; oligopeptide ABC transporter permease complement(2277412..2278446) Listeria monocytogenes serotype 4b str. F2365 2798626 YP_014818.1 CDS LMOf2365_2228 NC_002973.6 2278446 2279375 R identified by similarity to SP:P24138; match to protein family HMM PF00528; oligopeptide ABC transporter permease complement(2278446..2279375) Listeria monocytogenes serotype 4b str. F2365 2798627 YP_014819.1 CDS LMOf2365_2229 NC_002973.6 2279654 2281330 R identified by match to protein family HMM PF00496; oligopeptide ABC transporter substrate-binding protein complement(2279654..2281330) Listeria monocytogenes serotype 4b str. F2365 2798603 YP_014820.1 CDS LMOf2365_2230 NC_002973.6 2281954 2282298 D hypothetical protein 2281954..2282298 Listeria monocytogenes serotype 4b str. F2365 2799584 YP_014821.1 CDS trpS NC_002973.6 2282633 2283628 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 2282633..2283628 Listeria monocytogenes serotype 4b str. F2365 2799514 YP_014822.1 CDS LMOf2365_2232 NC_002973.6 2283684 2284100 R identified by match to protein family HMM PF02566; OsmC/Ohr family protein complement(2283684..2284100) Listeria monocytogenes serotype 4b str. F2365 2799531 YP_014823.1 CDS LMOf2365_2233 NC_002973.6 2284084 2284539 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(2284084..2284539) Listeria monocytogenes serotype 4b str. F2365 2799394 YP_014824.1 CDS fabF NC_002973.6 2284658 2285899 R identified by similarity to GP:6118425; match to protein family HMM PF00109; match to protein family HMM PF02801; 3-ketoacyl-ACP synthase complement(2284658..2285899) Listeria monocytogenes serotype 4b str. F2365 2799395 YP_014825.1 CDS fabH NC_002973.6 2286102 2287040 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(2286102..2287040) Listeria monocytogenes serotype 4b str. F2365 2798995 YP_014826.1 CDS LMOf2365_2236 NC_002973.6 2287160 2288263 R identified by match to protein family HMM PF01832; N-acetylmuramoyl-L-alanine amidase complement(2287160..2288263) Listeria monocytogenes serotype 4b str. F2365 2797382 YP_014827.1 CDS LMOf2365_2237 NC_002973.6 2288610 2288798 D hypothetical protein 2288610..2288798 Listeria monocytogenes serotype 4b str. F2365 2798977 YP_014828.1 CDS gpm NC_002973.6 2288888 2289577 R identified by match to protein family HMM PF00300; match to protein family HMM TIGR01258; phosphoglycerate mutase complement(2288888..2289577) Listeria monocytogenes serotype 4b str. F2365 2798936 YP_014829.1 CDS LMOf2365_2239 NC_002973.6 2289668 2292268 R identified by similarity to SP:Q9RA63; match to protein family HMM PF00004; match to protein family HMM PF02861; clpB protein complement(2289668..2292268) Listeria monocytogenes serotype 4b str. F2365 2798880 YP_014830.1 CDS LMOf2365_2240 NC_002973.6 2292416 2293093 R identified by match to protein family HMM PF01027; hypothetical protein complement(2292416..2293093) Listeria monocytogenes serotype 4b str. F2365 2798938 YP_014831.1 CDS LMOf2365_2241 NC_002973.6 2293205 2293975 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD superfamily hydrolase complement(2293205..2293975) Listeria monocytogenes serotype 4b str. F2365 2799013 YP_014832.1 CDS LMOf2365_2242 NC_002973.6 2294039 2294824 R identified by match to protein family HMM PF00583; acetyltransferase complement(2294039..2294824) Listeria monocytogenes serotype 4b str. F2365 2799014 YP_014833.1 CDS LMOf2365_2243 NC_002973.6 2294945 2295289 R identified by similarity to OMNI:NTL01LI2298; hypothetical protein complement(2294945..2295289) Listeria monocytogenes serotype 4b str. F2365 2798079 YP_014834.1 CDS hemH NC_002973.6 2295446 2296375 R protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase complement(2295446..2296375) Listeria monocytogenes serotype 4b str. F2365 2799564 YP_014835.1 CDS hemE NC_002973.6 2296372 2297433 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(2296372..2297433) Listeria monocytogenes serotype 4b str. F2365 2799640 YP_014836.1 CDS LMOf2365_2246 NC_002973.6 2297630 2298133 D identified by similarity to SP:P38049; hypothetical protein 2297630..2298133 Listeria monocytogenes serotype 4b str. F2365 2799092 YP_014837.1 CDS LMOf2365_2247 NC_002973.6 2298172 2299389 R identified by similarity to SP:P55340; match to protein family HMM PF05975; ABC transporter permease complement(2298172..2299389) Listeria monocytogenes serotype 4b str. F2365 2798639 YP_014838.1 CDS LMOf2365_2248 NC_002973.6 2299379 2300131 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2299379..2300131) Listeria monocytogenes serotype 4b str. F2365 2798640 YP_014839.1 CDS LMOf2365_2249 NC_002973.6 2300292 2300714 D identified by similarity to SP:O07513; match to protein family HMM PF01230; HIT family protein 2300292..2300714 Listeria monocytogenes serotype 4b str. F2365 2797553 YP_014840.1 CDS LMOf2365_2250 NC_002973.6 2300744 2301106 D identified by similarity to OMNI:NTL01BS01000; hypothetical protein 2300744..2301106 Listeria monocytogenes serotype 4b str. F2365 2799671 YP_014841.1 CDS LMOf2365_2251 NC_002973.6 2301289 2301828 D identified by similarity to OMNI:NTL01LI2306; hypothetical protein 2301289..2301828 Listeria monocytogenes serotype 4b str. F2365 2799672 YP_014842.1 CDS prsA-2 NC_002973.6 2301945 2302826 D identified by similarity to SP:P24327; match to protein family HMM PF00639; protein export protein 2301945..2302826 Listeria monocytogenes serotype 4b str. F2365 2799631 YP_014843.1 CDS LMOf2365_2253 NC_002973.6 2302867 2303808 R catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates; 3'-5' exoribonuclease YhaM complement(2302867..2303808) Listeria monocytogenes serotype 4b str. F2365 2799632 YP_014844.1 CDS LMOf2365_2254 NC_002973.6 2303853 2306576 R hypothetical protein complement(2303853..2306576) Listeria monocytogenes serotype 4b str. F2365 2797159 YP_014845.1 CDS LMOf2365_2255 NC_002973.6 2306573 2307808 R identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase complement(2306573..2307808) Listeria monocytogenes serotype 4b str. F2365 2797486 YP_014846.1 CDS LMOf2365_2256 NC_002973.6 2307951 2308304 R identified by match to protein family HMM PF06133; hypothetical protein complement(2307951..2308304) Listeria monocytogenes serotype 4b str. F2365 2797487 YP_014847.1 CDS LMOf2365_2257 NC_002973.6 2308386 2309519 R identified by match to protein family HMM PF04286; hypothetical protein complement(2308386..2309519) Listeria monocytogenes serotype 4b str. F2365 2799833 YP_014848.1 CDS fumC NC_002973.6 2309623 2310990 R class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase complement(2309623..2310990) Listeria monocytogenes serotype 4b str. F2365 2799834 YP_014849.1 CDS LMOf2365_2259 NC_002973.6 2311060 2311854 R hypothetical protein complement(2311060..2311854) Listeria monocytogenes serotype 4b str. F2365 2798320 YP_014850.1 CDS LMOf2365_2260 NC_002973.6 2311851 2312756 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2311851..2312756) Listeria monocytogenes serotype 4b str. F2365 2798518 YP_014851.1 CDS LMOf2365_2261 NC_002973.6 2312756 2312953 R hypothetical protein complement(2312756..2312953) Listeria monocytogenes serotype 4b str. F2365 2798519 YP_014852.1 CDS LMOf2365_2262 NC_002973.6 2313063 2315204 R identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074; penicillin-binding protein complement(2313063..2315204) Listeria monocytogenes serotype 4b str. F2365 2799229 YP_014853.1 CDS LMOf2365_2263 NC_002973.6 2315527 2315952 D identified by similarity to SP:P45947; arsenate reductase 2315527..2315952 Listeria monocytogenes serotype 4b str. F2365 2799230 YP_014854.1 CDS LMOf2365_2264 NC_002973.6 2316016 2316885 D identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 2316016..2316885 Listeria monocytogenes serotype 4b str. F2365 2799217 YP_014855.1 CDS LMOf2365_2265 NC_002973.6 2317141 2318445 D identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; hypothetical protein 2317141..2318445 Listeria monocytogenes serotype 4b str. F2365 2799030 YP_014856.1 CDS LMOf2365_2266 NC_002973.6 2318486 2319364 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(2318486..2319364) Listeria monocytogenes serotype 4b str. F2365 2799031 YP_014857.1 CDS LMOf2365_2267 NC_002973.6 2319665 2320519 D identified by similarity to SP:P42419; IolI protein 2319665..2320519 Listeria monocytogenes serotype 4b str. F2365 2799489 YP_014858.1 CDS LMOf2365_2268 NC_002973.6 2320579 2322513 D identified by similarity to SP:P32382; match to protein family HMM PF00070; match to protein family HMM PF00724; NADH oxidase 2320579..2322513 Listeria monocytogenes serotype 4b str. F2365 2799490 YP_014859.1 CDS LMOf2365_2269 NC_002973.6 2322572 2323441 D catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 2322572..2323441 Listeria monocytogenes serotype 4b str. F2365 2799558 YP_014860.1 CDS LMOf2365_2270 NC_002973.6 2323474 2324682 D transporter 2323474..2324682 Listeria monocytogenes serotype 4b str. F2365 2797004 YP_014861.1 CDS LMOf2365_2271 NC_002973.6 2324842 2326032 D identified by match to protein family HMM PF00083; major facilitator family transporter 2324842..2326032 Listeria monocytogenes serotype 4b str. F2365 2797005 YP_014862.1 CDS LMOf2365_2272 NC_002973.6 2326071 2327135 R identified by similarity to OMNI:NTL01LI2325; hypothetical protein complement(2326071..2327135) Listeria monocytogenes serotype 4b str. F2365 2797369 YP_014863.1 CDS LMOf2365_2273 NC_002973.6 2327132 2328010 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2327132..2328010) Listeria monocytogenes serotype 4b str. F2365 2797370 YP_014864.1 CDS LMOf2365_2274 NC_002973.6 2328000 2328395 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(2328000..2328395) Listeria monocytogenes serotype 4b str. F2365 2798088 YP_014865.1 CDS LMOf2365_2276 NC_002973.6 2329106 2329675 D identified by similarity to SP:P19219; match to protein family HMM PF00165; match to protein family HMM PF02805; Ada regulatory protein 2329106..2329675 Listeria monocytogenes serotype 4b str. F2365 2799467 YP_014866.1 CDS LMOf2365_2277 NC_002973.6 2329697 2330566 D identified by match to protein family HMM PF00849; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase D 2329697..2330566 Listeria monocytogenes serotype 4b str. F2365 2798949 YP_014867.1 CDS LMOf2365_2278 NC_002973.6 2330579 2330971 R identified by match to protein family HMM PF00903; glyoxalase complement(2330579..2330971) Listeria monocytogenes serotype 4b str. F2365 2798950 YP_014868.1 CDS LMOf2365_2279 NC_002973.6 2330973 2331629 R hypothetical protein complement(2330973..2331629) Listeria monocytogenes serotype 4b str. F2365 2799176 YP_014869.1 CDS LMOf2365_2280 NC_002973.6 2331626 2332510 R identified by match to protein family HMM PF00248; aldo/keto reductase oxidoreductase complement(2331626..2332510) Listeria monocytogenes serotype 4b str. F2365 2799177 YP_014870.1 CDS LMOf2365_2281 NC_002973.6 2332897 2333517 D identified by match to protein family HMM PF01865; hypothetical protein 2332897..2333517 Listeria monocytogenes serotype 4b str. F2365 2797597 YP_014871.1 CDS LMOf2365_2282 NC_002973.6 2333531 2334529 D identified by match to protein family HMM PF01384; phosphate transporter family protein 2333531..2334529 Listeria monocytogenes serotype 4b str. F2365 2799215 YP_014872.1 CDS LMOf2365_2283 NC_002973.6 2334721 2336181 D identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease 2334721..2336181 Listeria monocytogenes serotype 4b str. F2365 2799216 YP_014873.1 CDS LMOf2365_2284 NC_002973.6 2336174 2336899 D identified by similarity to SP:P27675; match to protein family HMM PF00005; amino acid ABC transporter ATP-binding protein 2336174..2336899 Listeria monocytogenes serotype 4b str. F2365 2799851 YP_014874.1 CDS aspB NC_002973.6 2336972 2338123 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 2336972..2338123 Listeria monocytogenes serotype 4b str. F2365 2797934 YP_014875.1 CDS LMOf2365_2286 NC_002973.6 2338167 2338796 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; HAD superfamily hydrolase complement(2338167..2338796) Listeria monocytogenes serotype 4b str. F2365 2797918 YP_014876.1 CDS LMOf2365_2287 NC_002973.6 2338969 2340261 D identified by match to protein family HMM PF00860; xanthine/uracil permease 2338969..2340261 Listeria monocytogenes serotype 4b str. F2365 2797919 YP_014877.1 CDS LMOf2365_2288 NC_002973.6 2340374 2340640 D identified by similarity to OMNI:NTL01LI2341; hypothetical protein 2340374..2340640 Listeria monocytogenes serotype 4b str. F2365 2797400 YP_014878.1 CDS LMOf2365_2289 NC_002973.6 2340683 2341204 R identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382; PfpI family intracellular peptidase complement(2340683..2341204) Listeria monocytogenes serotype 4b str. F2365 2799629 YP_014879.1 CDS LMOf2365_2290 NC_002973.6 2341368 2341712 R hypothetical protein complement(2341368..2341712) Listeria monocytogenes serotype 4b str. F2365 2799649 YP_014880.1 CDS LMOf2365_2291 NC_002973.6 2341709 2341900 R identified by similarity to OMNI:NTL01LI2343; ribulose-phosphate 3-epimerase complement(2341709..2341900) Listeria monocytogenes serotype 4b str. F2365 2799650 YP_014881.1 CDS LMOf2365_2292 NC_002973.6 2342051 2342401 D identified by similarity to SP:P46319; match to protein family HMM PF02255; PTS system beta-glucoside-specific transporter subunit IIA 2342051..2342401 Listeria monocytogenes serotype 4b str. F2365 2799695 YP_014882.1 CDS LMOf2365_2293 NC_002973.6 2342392 2343267 R identified by match to protein family HMM PF00583; acetyltransferase complement(2342392..2343267) Listeria monocytogenes serotype 4b str. F2365 2797580 YP_014883.1 CDS LMOf2365_2294 NC_002973.6 2343347 2343655 R identified by similarity to OMNI:NTL01LI2346; match to protein family HMM PF01883; hypothetical protein complement(2343347..2343655) Listeria monocytogenes serotype 4b str. F2365 2797605 YP_014884.1 CDS LMOf2365_2295 NC_002973.6 2343720 2344472 R hypothetical protein complement(2343720..2344472) Listeria monocytogenes serotype 4b str. F2365 2797606 YP_014885.1 CDS LMOf2365_2296 NC_002973.6 2344624 2345436 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD family hydrolase 2344624..2345436 Listeria monocytogenes serotype 4b str. F2365 2797608 YP_014886.1 CDS LMOf2365_2297 NC_002973.6 2345514 2346416 R identified by similarity to SP:P39803; match to protein family HMM PF02588; hypothetical protein complement(2345514..2346416) Listeria monocytogenes serotype 4b str. F2365 2797613 YP_014887.1 CDS LMOf2365_2298 NC_002973.6 2346500 2346862 R identified by similarity to OMNI:NTL01LI2350; hypothetical protein complement(2346500..2346862) Listeria monocytogenes serotype 4b str. F2365 2797616 YP_014888.1 CDS LMOf2365_2299 NC_002973.6 2346882 2347730 R identified by match to protein family HMM PF01557; fumarylacetoacetate hydrolase complement(2346882..2347730) Listeria monocytogenes serotype 4b str. F2365 2797617 YP_014889.1 CDS addA NC_002973.6 2347731 2351438 R identified by similarity to SP:P23478; match to protein family HMM PF00580; match to protein family HMM TIGR01612; ATP-dependent nuclease subunit A complement(2347731..2351438) Listeria monocytogenes serotype 4b str. F2365 2797627 YP_014890.1 CDS addB NC_002973.6 2351440 2354913 R identified by similarity to SP:P23477; match to protein family HMM TIGR01612; ATP-dependent nuclease subunit B complement(2351440..2354913) Listeria monocytogenes serotype 4b str. F2365 2797628 YP_014891.1 CDS yhzC NC_002973.6 2355063 2355419 R YhzC protein complement(2355063..2355419) Listeria monocytogenes serotype 4b str. F2365 2797632 YP_014892.1 CDS LMOf2365_2303 NC_002973.6 2355550 2356158 D identified by similarity to SP:P40396; transcriptional regulator 2355550..2356158 Listeria monocytogenes serotype 4b str. F2365 2797071 YP_014893.1 CDS LMOf2365_2304 NC_002973.6 2356213 2356569 R identified by match to protein family HMM PF01381; DNA-binding protein complement(2356213..2356569) Listeria monocytogenes serotype 4b str. F2365 2797532 YP_014894.1 CDS LMOf2365_2305 NC_002973.6 2356666 2358564 R identified by similarity to SP:P23355; match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427; PTS system fructose-specific transporter subunit IIABC complement(2356666..2358564) Listeria monocytogenes serotype 4b str. F2365 2797533 YP_014895.1 CDS fruB NC_002973.6 2358566 2359489 R identified by similarity to SP:O31714; match to protein family HMM PF00294; 1-phosphofructokinase complement(2358566..2359489) Listeria monocytogenes serotype 4b str. F2365 2797536 YP_014896.1 CDS LMOf2365_2307 NC_002973.6 2359486 2360238 R identified by match to protein family HMM PF00455; DeoR family transcriptional regulator complement(2359486..2360238) Listeria monocytogenes serotype 4b str. F2365 2797544 YP_014897.1 CDS LMOf2365_2308 NC_002973.6 2360456 2361781 D identified by similarity to SP:Q56115; match to protein family HMM PF03051; aminopeptidase C 2360456..2361781 Listeria monocytogenes serotype 4b str. F2365 2799716 YP_014898.1 CDS LMOf2365_2309 NC_002973.6 2361778 2362221 R identified by match to protein family HMM PF04463; hypothetical protein complement(2361778..2362221) Listeria monocytogenes serotype 4b str. F2365 2799717 YP_014899.1 CDS LMOf2365_2310 NC_002973.6 2362302 2363213 R identified by match to protein family HMM PF04227; indigoidine synthase A-like protein complement(2362302..2363213) Listeria monocytogenes serotype 4b str. F2365 2799741 YP_014900.1 CDS LMOf2365_2311 NC_002973.6 2363210 2364328 R identified by match to protein family HMM PF00294; carbohydrate kinase complement(2363210..2364328) Listeria monocytogenes serotype 4b str. F2365 2797932 YP_014901.1 CDS rsuA NC_002973.6 2364461 2365162 R identified by similarity to SP:P33918; match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; ribosomal small subunit pseudouridine synthase A complement(2364461..2365162) Listeria monocytogenes serotype 4b str. F2365 2797933 YP_014902.1 CDS LMOf2365_2313 NC_002973.6 2365236 2366558 R identified by similarity to SP:P54950; NtaA/SnaA/SoxA family monooxygenase complement(2365236..2366558) Listeria monocytogenes serotype 4b str. F2365 2797939 YP_014903.1 CDS LMOf2365_2314 NC_002973.6 2366555 2366821 R identified by similarity to SP:P37687; glutaredoxin family protein complement(2366555..2366821) Listeria monocytogenes serotype 4b str. F2365 2797946 YP_014904.1 CDS LMOf2365_2315 NC_002973.6 2366814 2367809 R identified by match to protein family HMM PF00296; luciferase complement(2366814..2367809) Listeria monocytogenes serotype 4b str. F2365 2797769 YP_014905.1 CDS LMOf2365_2316 NC_002973.6 2367806 2368585 R identified by similarity to SP:O34900; match to protein family HMM PF00005; amino acid ABC transporter ATP-binding protein complement(2367806..2368585) Listeria monocytogenes serotype 4b str. F2365 2797770 YP_014906.1 CDS LMOf2365_2317 NC_002973.6 2368582 2369289 R identified by similarity to SP:P54953; match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter permease complement(2368582..2369289) Listeria monocytogenes serotype 4b str. F2365 2799763 YP_014907.1 CDS LMOf2365_2318 NC_002973.6 2369303 2370019 R identified by similarity to SP:P76315; match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter permease complement(2369303..2370019) Listeria monocytogenes serotype 4b str. F2365 2799836 YP_014908.1 CDS LMOf2365_2319 NC_002973.6 2370041 2370850 R identified by match to protein family HMM PF00497; amino acid ABC transporter substrate-binding protein complement(2370041..2370850) Listeria monocytogenes serotype 4b str. F2365 2799840 YP_014909.1 CDS LMOf2365_2320 NC_002973.6 2370867 2371403 R identified by match to protein family HMM PF00583; acetyltransferase complement(2370867..2371403) Listeria monocytogenes serotype 4b str. F2365 2799841 YP_014910.1 CDS LMOf2365_2321 NC_002973.6 2371419 2371964 R identified by similarity to SP:P80644; match to protein family HMM PF03358; FMN reductase, NADPH-dependent complement(2371419..2371964) Listeria monocytogenes serotype 4b str. F2365 2798613 YP_014911.1 CDS LMOf2365_2322 NC_002973.6 2372207 2373106 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 2372207..2373106 Listeria monocytogenes serotype 4b str. F2365 2799233 YP_014912.1 CDS LMOf2365_2323 NC_002973.6 2373132 2375084 R identified by match to protein family HMM PF00999; sodium/hydrogen exchanger family protein complement(2373132..2375084) Listeria monocytogenes serotype 4b str. F2365 2799221 YP_014913.1 CDS LMOf2365_2324 NC_002973.6 2375208 2376806 R identified by similarity to OMNI:NTL01BS02949; hypothetical protein complement(2375208..2376806) Listeria monocytogenes serotype 4b str. F2365 2799222 YP_014914.1 CDS LMOf2365_2325 NC_002973.6 2376810 2378051 R identified by similarity to SP:P21191; transporter complement(2376810..2378051) Listeria monocytogenes serotype 4b str. F2365 2797018 YP_014915.1 CDS LMOf2365_2326 NC_002973.6 2378252 2378863 R identified by similarity to OMNI:NTL01LI2433; hypothetical protein complement(2378252..2378863) Listeria monocytogenes serotype 4b str. F2365 2799501 YP_014916.1 CDS LMOf2365_2327 NC_002973.6 2379053 2379583 R hypothetical protein complement(2379053..2379583) Listeria monocytogenes serotype 4b str. F2365 2798096 YP_014917.1 CDS LMOf2365_2328 NC_002973.6 2379599 2380330 R identified by similarity to SP:O35000; match to protein family HMM PF01182; glucosamine-6-phosphate isomerase complement(2379599..2380330) Listeria monocytogenes serotype 4b str. F2365 2798097 YP_014918.1 CDS LMOf2365_2329 NC_002973.6 2380374 2381219 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; cof family hydrolase complement(2380374..2381219) Listeria monocytogenes serotype 4b str. F2365 2799438 YP_014919.1 CDS LMOf2365_2330 NC_002973.6 2381339 2384122 R hypothetical protein complement(2381339..2384122) Listeria monocytogenes serotype 4b str. F2365 2798057 YP_014920.1 CDS LMOf2365_2331 NC_002973.6 2384156 2384626 R identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; Rrf2 family protein complement(2384156..2384626) Listeria monocytogenes serotype 4b str. F2365 2799003 YP_014921.1 CDS LMOf2365_2332 NC_002973.6 2384738 2384854 D hypothetical protein 2384738..2384854 Listeria monocytogenes serotype 4b str. F2365 2799004 YP_014922.1 CDS LMOf2365_2333 NC_002973.6 2385019 2386542 D identified by match to protein family HMM PF00324; match to protein family HMM TIGR00910; amino acid antiporter 2385019..2386542 Listeria monocytogenes serotype 4b str. F2365 2798239 YP_014923.1 CDS gadB NC_002973.6 2386555 2387949 D identified by similarity to SP:Q928R9; match to protein family HMM PF00282; match to protein family HMM TIGR01788; glutamate decarboxylase 2386555..2387949 Listeria monocytogenes serotype 4b str. F2365 2798935 YP_014924.1 CDS LMOf2365_2335 NC_002973.6 2387958 2389472 R identified by similarity to GP:460083; match to protein family HMM PF07003; RofA family transcriptional regulator complement(2387958..2389472) Listeria monocytogenes serotype 4b str. F2365 2799625 YP_014925.1 CDS LMOf2365_2336 NC_002973.6 2396512 2396604 R hypothetical protein complement(2396512..2396604) Listeria monocytogenes serotype 4b str. F2365 2798044 YP_014926.1 CDS LMOf2365_2337 NC_002973.6 2396689 2397447 R identified by match to protein family HMM PF00455; DeoR family transcriptional regulator complement(2396689..2397447) Listeria monocytogenes serotype 4b str. F2365 2798045 YP_014927.1 CDS pgi NC_002973.6 2397552 2398904 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(2397552..2398904) Listeria monocytogenes serotype 4b str. F2365 2798093 YP_014928.1 CDS LMOf2365_2339 NC_002973.6 2399006 2399413 R identified by match to protein family HMM PF00293; MutT/nudix family protein complement(2399006..2399413) Listeria monocytogenes serotype 4b str. F2365 2798878 YP_014929.1 CDS LMOf2365_2340 NC_002973.6 2399561 2399914 R induced by heat shock, salt stress, oxidative stress, glucose limitation and oxygen limitation; general stress protein 13 complement(2399561..2399914) Listeria monocytogenes serotype 4b str. F2365 2799400 YP_014930.1 CDS LMOf2365_2341 NC_002973.6 2400068 2401234 D identified by match to protein family HMM PF00155; class I aminotransferase 2400068..2401234 Listeria monocytogenes serotype 4b str. F2365 2799401 YP_014931.1 CDS LMOf2365_2342 NC_002973.6 2401373 2402476 D identified by match to protein family HMM PF02687; ABC transporter permease 2401373..2402476 Listeria monocytogenes serotype 4b str. F2365 2799418 YP_014932.1 CDS LMOf2365_2343 NC_002973.6 2402476 2403156 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2402476..2403156 Listeria monocytogenes serotype 4b str. F2365 2798098 YP_014933.1 CDS LMOf2365_2344 NC_002973.6 2403140 2403514 R identified by similarity to SP:Q45399; match to protein family HMM PF02302; PTS system cellobiose-specific transporter subunit IIB complement(2403140..2403514) Listeria monocytogenes serotype 4b str. F2365 2798099 YP_014934.1 CDS LMOf2365_2345 NC_002973.6 2403759 2405120 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase 2403759..2405120 Listeria monocytogenes serotype 4b str. F2365 2797371 YP_014935.1 CDS LMOf2365_2346 NC_002973.6 2405165 2405557 R identified by similarity to GP:16414996; hypothetical protein complement(2405165..2405557) Listeria monocytogenes serotype 4b str. F2365 2799912 YP_014936.1 CDS LMOf2365_2347 NC_002973.6 2405671 2407041 R identified by similarity to GP:13936341; hypothetical protein complement(2405671..2407041) Listeria monocytogenes serotype 4b str. F2365 2799758 YP_014937.1 CDS LMOf2365_2348 NC_002973.6 2407223 2407501 D hypothetical protein 2407223..2407501 Listeria monocytogenes serotype 4b str. F2365 2799759 YP_014938.1 CDS LMOf2365_2349 NC_002973.6 2407526 2408110 R identified by match to protein family HMM PF00160; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(2407526..2408110) Listeria monocytogenes serotype 4b str. F2365 2799724 YP_014939.1 CDS LMOf2365_2350 NC_002973.6 2408342 2409553 D identified by similarity to SP:P25744; match to protein family HMM PF00083; major facilitator family transporter 2408342..2409553 Listeria monocytogenes serotype 4b str. F2365 2797163 YP_014940.1 CDS LMOf2365_2351 NC_002973.6 2409898 2412306 D subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit A 2409898..2412306 Listeria monocytogenes serotype 4b str. F2365 2797164 YP_014941.1 CDS LMOf2365_2352 NC_002973.6 2412293 2412715 D subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in the case of S. meliloti it was proved to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit B 2412293..2412715 Listeria monocytogenes serotype 4b str. F2365 2797081 YP_014942.1 CDS LMOf2365_2353 NC_002973.6 2412715 2413062 D subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 2412715..2413062 Listeria monocytogenes serotype 4b str. F2365 2799635 YP_014943.1 CDS LMOf2365_2354 NC_002973.6 2413052 2414539 D subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D 2413052..2414539 Listeria monocytogenes serotype 4b str. F2365 2799644 YP_014944.1 CDS LMOf2365_2355 NC_002973.6 2414546 2415025 D subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit E 2414546..2415025 Listeria monocytogenes serotype 4b str. F2365 2799645 YP_014945.1 CDS LMOf2365_2356 NC_002973.6 2415022 2415309 D subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit F 2415022..2415309 Listeria monocytogenes serotype 4b str. F2365 2799662 YP_014946.1 CDS LMOf2365_2357 NC_002973.6 2415293 2415886 D subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit G 2415293..2415886 Listeria monocytogenes serotype 4b str. F2365 2799660 YP_014947.1 CDS LMOf2365_2358 NC_002973.6 2415931 2416302 R identified by similarity to GP:18266385; match to protein family HMM PF03061; match to protein family HMM TIGR00369; thioesterase complement(2415931..2416302) Listeria monocytogenes serotype 4b str. F2365 2799661 YP_014948.1 CDS LMOf2365_2359 NC_002973.6 2416430 2416903 D identified by similarity to OMNI:NTL01LI2468; match to protein family HMM PF02681; hypothetical protein 2416430..2416903 Listeria monocytogenes serotype 4b str. F2365 2797602 YP_014949.1 CDS LMOf2365_2360 NC_002973.6 2417015 2418235 D identified by similarity to OMNI:EF3007; hypothetical protein 2417015..2418235 Listeria monocytogenes serotype 4b str. F2365 2797039 YP_014950.1 CDS LMOf2365_2361 NC_002973.6 2418262 2418867 R hypothetical protein complement(2418262..2418867) Listeria monocytogenes serotype 4b str. F2365 2797113 YP_014951.1 CDS LMOf2365_2362 NC_002973.6 2419029 2419847 R identified by similarity to OMNI:NTL01LI2469; hypothetical protein complement(2419029..2419847) Listeria monocytogenes serotype 4b str. F2365 2797114 YP_014952.1 CDS LMOf2365_2363 NC_002973.6 2419932 2421143 R identified by match to protein family HMM PF00070; pyridine nucleotide-disulfide oxidoreductase complement(2419932..2421143) Listeria monocytogenes serotype 4b str. F2365 2797116 YP_014953.1 CDS LMOf2365_2364 NC_002973.6 2421593 2422588 D identified by match to protein family HMM PF00070; pyridine nucleotide-disulfide oxidoreductase 2421593..2422588 Listeria monocytogenes serotype 4b str. F2365 2797165 YP_014954.1 CDS LMOf2365_2365 NC_002973.6 2422676 2423305 D identified by similarity to OMNI:NTL01BH1523; hypothetical protein 2422676..2423305 Listeria monocytogenes serotype 4b str. F2365 2797166 YP_014955.1 CDS LMOf2365_2366 NC_002973.6 2423351 2423584 R identified by similarity to OMNI:NTL01LI2474; hypothetical protein complement(2423351..2423584) Listeria monocytogenes serotype 4b str. F2365 2797171 YP_014956.1 CDS LMOf2365_2367 NC_002973.6 2423606 2423932 R identified by similarity to OMNI:NTL01LI2475; hypothetical protein complement(2423606..2423932) Listeria monocytogenes serotype 4b str. F2365 2797182 YP_014957.1 CDS LMOf2365_2368 NC_002973.6 2424173 2424370 R identified by similarity to OMNI:NTL01LI2476; hypothetical protein complement(2424173..2424370) Listeria monocytogenes serotype 4b str. F2365 2797509 YP_014958.1 CDS LMOf2365_2369 NC_002973.6 2424411 2424530 R hypothetical protein complement(2424411..2424530) Listeria monocytogenes serotype 4b str. F2365 2797510 YP_014959.1 CDS LMOf2365_2370 NC_002973.6 2424856 2427243 D identified by match to protein family HMM PF00560; match to protein family HMM TIGR01167; cell wall surface anchor family protein 2424856..2427243 Listeria monocytogenes serotype 4b str. F2365 2797948 YP_014960.1 CDS LMOf2365_2371 NC_002973.6 2427416 2427652 D identified by similarity to OMNI:NTL01LI2479; match to protein family HMM PF01106; NifU family protein 2427416..2427652 Listeria monocytogenes serotype 4b str. F2365 2797752 YP_014961.1 CDS LMOf2365_2372 NC_002973.6 2427765 2428265 D identified by similarity to SP:O32124; hypothetical protein 2427765..2428265 Listeria monocytogenes serotype 4b str. F2365 2797753 YP_014962.1 CDS LMOf2365_2373 NC_002973.6 2428290 2429600 R identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; hypothetical protein complement(2428290..2429600) Listeria monocytogenes serotype 4b str. F2365 2797758 YP_014963.1 CDS LMOf2365_2374 NC_002973.6 2429636 2430079 R identified by match to protein family HMM PF00583; acetyltransferase complement(2429636..2430079) Listeria monocytogenes serotype 4b str. F2365 2797664 YP_014964.1 CDS LMOf2365_2375 NC_002973.6 2430128 2430895 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01457; match to protein family HMM TIGR01460; HAD family hydrolase complement(2430128..2430895) Listeria monocytogenes serotype 4b str. F2365 2798169 YP_014965.1 CDS LMOf2365_2376 NC_002973.6 2430915 2431190 R identified by similarity to OMNI:NTL01LI2484; match to protein family HMM PF06265; hypothetical protein complement(2430915..2431190) Listeria monocytogenes serotype 4b str. F2365 2798170 YP_014966.1 CDS LMOf2365_2377 NC_002973.6 2431187 2432575 R identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase complement(2431187..2432575) Listeria monocytogenes serotype 4b str. F2365 2799783 YP_014967.1 CDS LMOf2365_2378 NC_002973.6 2432702 2433550 D identified by match to protein family HMM PF01925; hypothetical protein 2432702..2433550 Listeria monocytogenes serotype 4b str. F2365 2799791 YP_014968.1 CDS LMOf2365_2379 NC_002973.6 2433551 2433916 D identified by similarity to OMNI:NTL01LI2487; hypothetical protein 2433551..2433916 Listeria monocytogenes serotype 4b str. F2365 2799792 YP_014969.1 CDS LMOf2365_2380 NC_002973.6 2433949 2434791 R identified by similarity to GP:16415027; match to protein family HMM PF01904; hypothetical protein complement(2433949..2434791) Listeria monocytogenes serotype 4b str. F2365 2799806 YP_014970.1 CDS LMOf2365_2381 NC_002973.6 2434933 2435247 R identified by similarity to GP:12141272; hypothetical protein complement(2434933..2435247) Listeria monocytogenes serotype 4b str. F2365 2798618 YP_014971.1 CDS sufB NC_002973.6 2435382 2436776 R identified by similarity to OMNI:NTL01BH3471; match to protein family HMM PF01458; match to protein family HMM TIGR01980; FeS assembly protein SufB complement(2435382..2436776) Listeria monocytogenes serotype 4b str. F2365 2798709 YP_014972.1 CDS LMOf2365_2383 NC_002973.6 2436799 2437242 R identified by similarity to OMNI:NTL01LI2490; match to protein family HMM PF01592; NifU family protein complement(2436799..2437242) Listeria monocytogenes serotype 4b str. F2365 2798710 YP_014973.1 CDS LMOf2365_2384 NC_002973.6 2437239 2438465 R identified by similarity to SP:Q9K7A0; match to protein family HMM PF00266; match to protein family HMM TIGR01979; SufD subfamily cysteine desulfurase complement(2437239..2438465) Listeria monocytogenes serotype 4b str. F2365 2798721 YP_014974.1 CDS sufD NC_002973.6 2438466 2439755 R identified by similarity to GP:19747525; match to protein family HMM PF01458; match to protein family HMM TIGR01981; FeS assembly protein SufD complement(2438466..2439755) Listeria monocytogenes serotype 4b str. F2365 2798744 YP_014975.1 CDS sufC NC_002973.6 2439786 2440571 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978; SUF system FeS assembly ATPase complement(2439786..2440571) Listeria monocytogenes serotype 4b str. F2365 2799856 YP_014976.1 CDS LMOf2365_2387 NC_002973.6 2440911 2441987 D identified by similarity to OMNI:NTL01LI2494; lipoprotein 2440911..2441987 Listeria monocytogenes serotype 4b str. F2365 2799141 YP_014977.1 CDS LMOf2365_2388 NC_002973.6 2442029 2442859 R identified by match to protein family HMM PF03180; ABC transporter substrate-binding protein complement(2442029..2442859) Listeria monocytogenes serotype 4b str. F2365 2799142 YP_014978.1 CDS LMOf2365_2389 NC_002973.6 2442924 2443598 R identified by match to protein family HMM PF00528; ABC transporter permease complement(2442924..2443598) Listeria monocytogenes serotype 4b str. F2365 2799066 YP_014979.1 CDS LMOf2365_2390 NC_002973.6 2443595 2444617 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2443595..2444617) Listeria monocytogenes serotype 4b str. F2365 2799290 YP_014980.1 CDS LMOf2365_2391 NC_002973.6 2444934 2445122 R hypothetical protein complement(2444934..2445122) Listeria monocytogenes serotype 4b str. F2365 2799291 YP_014981.1 CDS LMOf2365_2392 NC_002973.6 2445201 2446343 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(2445201..2446343) Listeria monocytogenes serotype 4b str. F2365 2799303 YP_014982.1 CDS LMOf2365_2393 NC_002973.6 2446333 2447028 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2446333..2447028) Listeria monocytogenes serotype 4b str. F2365 2799535 YP_014983.1 CDS LMOf2365_2394 NC_002973.6 2447103 2447978 R identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein complement(2447103..2447978) Listeria monocytogenes serotype 4b str. F2365 2799539 YP_014984.1 CDS LMOf2365_2395 NC_002973.6 2448170 2448454 R identified by similarity to SP:P06544; thioredoxin complement(2448170..2448454) Listeria monocytogenes serotype 4b str. F2365 2799540 YP_014985.1 CDS gcvH NC_002973.6 2448539 2448916 R part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H complement(2448539..2448916) Listeria monocytogenes serotype 4b str. F2365 2799475 YP_014986.1 CDS LMOf2365_2397 NC_002973.6 2448957 2449310 R identified by match to protein family HMM PF03960; match to protein family HMM TIGR01617; ArsC family protein complement(2448957..2449310) Listeria monocytogenes serotype 4b str. F2365 2799481 YP_014987.1 CDS LMOf2365_2398 NC_002973.6 2449467 2450642 R identified by match to protein family HMM PF01098; cell cycle protein FtsW complement(2449467..2450642) Listeria monocytogenes serotype 4b str. F2365 2797031 YP_014988.1 CDS LMOf2365_2399 NC_002973.6 2450718 2451887 R identified by match to protein family HMM PF01098; cell cycle protein FtsW complement(2450718..2451887) Listeria monocytogenes serotype 4b str. F2365 2797032 YP_014989.1 CDS LMOf2365_2400 NC_002973.6 2452029 2452820 R identified by similarity to SP:P49938; match to protein family HMM PF00005; iron compound ABC transporter ATP-binding protein complement(2452029..2452820) Listeria monocytogenes serotype 4b str. F2365 2799482 YP_014990.1 CDS LMOf2365_2401 NC_002973.6 2452817 2453827 R identified by similarity to GP:5006425; match to protein family HMM PF01032; iron compound ABC transporter permease complement(2452817..2453827) Listeria monocytogenes serotype 4b str. F2365 2798107 YP_014991.1 CDS LMOf2365_2402 NC_002973.6 2453827 2454798 R identified by similarity to SP:P37580; match to protein family HMM PF01497; iron compound ABC transporter substrate-binding protein complement(2453827..2454798) Listeria monocytogenes serotype 4b str. F2365 2798108 YP_014992.1 CDS LMOf2365_2403 NC_002973.6 2454954 2455118 D identified by similarity to OMNI:NTL01LI2509; hypothetical protein 2454954..2455118 Listeria monocytogenes serotype 4b str. F2365 2798993 YP_014993.1 CDS estA NC_002973.6 2455251 2456009 D identified by similarity to GP:15963430; match to protein family HMM PF00756; tributyrin esterase 2455251..2456009 Listeria monocytogenes serotype 4b str. F2365 2798964 YP_014994.1 CDS gadG NC_002973.6 2456049 2457452 R identified by similarity to SP:Q8Y4K4; match to protein family HMM PF00282; match to protein family HMM TIGR01788; glutamate decarboxylase complement(2456049..2457452) Listeria monocytogenes serotype 4b str. F2365 2798953 YP_014995.1 CDS LMOf2365_2406 NC_002973.6 2457579 2457887 D identified by similarity to OMNI:NTL01LI2512; hypothetical protein 2457579..2457887 Listeria monocytogenes serotype 4b str. F2365 2798966 YP_014996.1 CDS licT NC_002973.6 2457949 2458803 R identified by similarity to SP:P39805; match to protein family HMM PF00874; match to protein family HMM PF03123; transcription antiterminator LicT complement(2457949..2458803) Listeria monocytogenes serotype 4b str. F2365 2798967 YP_014997.1 CDS LMOf2365_2408 NC_002973.6 2458915 2459064 D hypothetical protein 2458915..2459064 Listeria monocytogenes serotype 4b str. F2365 2798064 YP_014998.1 CDS LMOf2365_2409 NC_002973.6 2459071 2459481 D identified by similarity to OMNI:NTL01LI2514; hypothetical protein 2459071..2459481 Listeria monocytogenes serotype 4b str. F2365 2797456 YP_014999.1 CDS LMOf2365_2410 NC_002973.6 2459504 2460016 R identified by similarity to OMNI:NTL01LI2515; hypothetical protein complement(2459504..2460016) Listeria monocytogenes serotype 4b str. F2365 2799657 YP_015000.1 CDS LMOf2365_2411 NC_002973.6 2460140 2460481 D identified by similarity to GP:16415055; match to protein family HMM TIGR01655; hypothetical protein 2460140..2460481 Listeria monocytogenes serotype 4b str. F2365 2799658 YP_015001.1 CDS LMOf2365_2412 NC_002973.6 2460513 2460896 R identified by similarity to OMNI:NTL01LI2517; hypothetical protein complement(2460513..2460896) Listeria monocytogenes serotype 4b str. F2365 2799670 YP_015002.1 CDS LMOf2365_2413 NC_002973.6 2460952 2461848 R identified by similarity to OMNI:NTL01LI2518; hypothetical protein complement(2460952..2461848) Listeria monocytogenes serotype 4b str. F2365 2799692 YP_015003.1 CDS LMOf2365_2414 NC_002973.6 2461893 2462462 R identified by similarity to OMNI:NTL01LI2519; hypothetical protein complement(2461893..2462462) Listeria monocytogenes serotype 4b str. F2365 2799693 YP_015004.1 CDS LMOf2365_2415 NC_002973.6 2462638 2463057 R hypothetical protein complement(2462638..2463057) Listeria monocytogenes serotype 4b str. F2365 2797124 YP_015005.1 CDS LMOf2365_2416 NC_002973.6 2463980 2465041 R identified by match to protein family HMM PF00560; hypothetical protein complement(2463980..2465041) Listeria monocytogenes serotype 4b str. F2365 2798236 YP_015006.1 CDS LMOf2365_2417 NC_002973.6 2465092 2469024 R identified by match to protein family HMM PF01055; match to protein family HMM PF03422; match to protein family HMM TIGR01612; glycosyl hydrolase complement(2465092..2469024) Listeria monocytogenes serotype 4b str. F2365 2798179 YP_015007.1 CDS LMOf2365_2418 NC_002973.6 2469039 2469983 R identified by match to protein family HMM PF00560; hypothetical protein complement(2469039..2469983) Listeria monocytogenes serotype 4b str. F2365 2799780 YP_015008.1 CDS LMOf2365_2419 NC_002973.6 2470044 2473319 R identified by match to protein family HMM PF01055; match to protein family HMM PF03422; match to protein family HMM TIGR01612; glycosyl hydrolase complement(2470044..2473319) Listeria monocytogenes serotype 4b str. F2365 2799781 YP_015009.1 CDS LMOf2365_2420 NC_002973.6 2473702 2474610 D identified by match to protein family HMM PF01381; match to protein family HMM TIGR01716; transcriptional activator 2473702..2474610 Listeria monocytogenes serotype 4b str. F2365 2799821 YP_015010.1 CDS smpB NC_002973.6 2474666 2475130 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(2474666..2475130) Listeria monocytogenes serotype 4b str. F2365 2798824 YP_015011.1 CDS LMOf2365_2422 NC_002973.6 2475146 2477497 R identified by similarity to SP:P21499; match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM TIGR00358; match to protein family HMM TIGR02063; ribonuclease R complement(2475146..2477497) Listeria monocytogenes serotype 4b str. F2365 2798655 YP_015012.1 CDS est-1 NC_002973.6 2477561 2478307 R identified by similarity to SP:Q06174; carboxylesterase complement(2477561..2478307) Listeria monocytogenes serotype 4b str. F2365 2798656 YP_015013.1 CDS secG NC_002973.6 2478605 2478838 R identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG complement(2478605..2478838) Listeria monocytogenes serotype 4b str. F2365 2798353 YP_015014.1 CDS est-2 NC_002973.6 2478928 2479671 R identified by similarity to SP:Q06174; carboxylesterase complement(2478928..2479671) Listeria monocytogenes serotype 4b str. F2365 2798533 YP_015015.1 CDS LMOf2365_2426 NC_002973.6 2479854 2480573 R identified by similarity to OMNI:NTL01LI2530; hypothetical protein complement(2479854..2480573) Listeria monocytogenes serotype 4b str. F2365 2799862 YP_015016.1 CDS LMOf2365_2427 NC_002973.6 2480706 2480873 R identified by similarity to OMNI:NTL01LI2531; hypothetical protein complement(2480706..2480873) Listeria monocytogenes serotype 4b str. F2365 2799552 YP_015017.1 CDS eno NC_002973.6 2480982 2482274 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(2480982..2482274) Listeria monocytogenes serotype 4b str. F2365 2799553 YP_015018.1 CDS gpmA NC_002973.6 2482410 2483942 R catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase complement(2482410..2483942) Listeria monocytogenes serotype 4b str. F2365 2799521 YP_015019.1 CDS tpiA NC_002973.6 2483944 2484699 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(2483944..2484699) Listeria monocytogenes serotype 4b str. F2365 2799556 YP_015020.1 CDS pgk NC_002973.6 2484745 2485935 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(2484745..2485935) Listeria monocytogenes serotype 4b str. F2365 2798090 YP_015021.1 CDS gap NC_002973.6 2486070 2487080 R catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase complement(2486070..2487080) Listeria monocytogenes serotype 4b str. F2365 2798062 YP_015022.1 CDS LMOf2365_2433 NC_002973.6 2487113 2488159 R identified by match to protein family HMM PF04198; transcriptional regulator complement(2487113..2488159) Listeria monocytogenes serotype 4b str. F2365 2798149 YP_015023.1 CDS LMOf2365_2434 NC_002973.6 2488600 2489943 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 complement(2488600..2489943) Listeria monocytogenes serotype 4b str. F2365 2798150 YP_015024.1 CDS LMOf2365_2435 NC_002973.6 2490103 2491029 R identified by match to protein family HMM PF01244; dipeptidase complement(2490103..2491029) Listeria monocytogenes serotype 4b str. F2365 2798101 YP_015025.1 CDS LMOf2365_2437 NC_002973.6 2493351 2493959 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2493351..2493959) Listeria monocytogenes serotype 4b str. F2365 2798038 YP_015026.1 CDS LMOf2365_2438 NC_002973.6 2493976 2494476 R identified by similarity to OMNI:NTL01LI2542; hypothetical protein complement(2493976..2494476) Listeria monocytogenes serotype 4b str. F2365 2797062 YP_015027.1 CDS LMOf2365_2439 NC_002973.6 2494607 2494942 D identified by similarity to OMNI:NTL01LI2543; hypothetical protein 2494607..2494942 Listeria monocytogenes serotype 4b str. F2365 2799517 YP_015028.1 CDS LMOf2365_2440 NC_002973.6 2495190 2496626 R identified by similarity to GP:3308998; match to protein family HMM PF00041; match to protein family HMM PF02839; match to protein family HMM PF03067; chitin-binding protein/carbohydrate-binding protein complement(2495190..2496626) Listeria monocytogenes serotype 4b str. F2365 2799900 YP_015029.1 CDS clpP NC_002973.6 2496783 2497379 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2496783..2497379 Listeria monocytogenes serotype 4b str. F2365 2799536 YP_015030.1 CDS LMOf2365_2442 NC_002973.6 2497428 2498819 R identified by match to protein family HMM PF00324; amino acid permease complement(2497428..2498819) Listeria monocytogenes serotype 4b str. F2365 2799491 YP_015031.1 CDS LMOf2365_2443 NC_002973.6 2499036 2500202 D identified by match to protein family HMM PF00560; hypothetical protein 2499036..2500202 Listeria monocytogenes serotype 4b str. F2365 2799492 YP_015032.1 CDS LMOf2365_2444 NC_002973.6 2500255 2501271 R catalyzes the reduction of alpha, beta-unsaturated aldehydes and ketones; reduces the nitro group nitroester and nitroaromatic compounds; NADPH dehydrogenase NamA complement(2500255..2501271) Listeria monocytogenes serotype 4b str. F2365 2799887 YP_015033.1 CDS LMOf2365_2445 NC_002973.6 2501298 2502269 R identified by similarity to OMNI:NTL01BS03470; match to protein family HMM PF02650; match to protein family HMM TIGR00647; hypothetical protein complement(2501298..2502269) Listeria monocytogenes serotype 4b str. F2365 2799124 YP_015034.1 CDS LMOf2365_2446 NC_002973.6 2502277 2503245 R identified by similarity to SP:Q928C0; match to protein family HMM PF01933; match to protein family HMM TIGR01826; hypothetical protein complement(2502277..2503245) Listeria monocytogenes serotype 4b str. F2365 2799889 YP_015035.1 CDS LMOf2365_2447 NC_002973.6 2503247 2504122 R identified by match to protein family HMM PF03668; hypothetical protein complement(2503247..2504122) Listeria monocytogenes serotype 4b str. F2365 2799890 YP_015036.1 CDS LMOf2365_2448 NC_002973.6 2504230 2505960 R identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01369; phosphoglucomutase/phosphomannomutase complement(2504230..2505960) Listeria monocytogenes serotype 4b str. F2365 2797675 YP_015037.1 CDS mro NC_002973.6 2506002 2507045 R identified by similarity to SP:P05149; match to protein family HMM PF01263; aldose 1-epimerase complement(2506002..2507045) Listeria monocytogenes serotype 4b str. F2365 2798727 YP_015038.1 CDS galE NC_002973.6 2507080 2508063 R identified by match to protein family HMM PF01370; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase complement(2507080..2508063) Listeria monocytogenes serotype 4b str. F2365 2798673 YP_015039.1 CDS trxB NC_002973.6 2508183 2509142 R identified by match to protein family HMM PF00070; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase complement(2508183..2509142) Listeria monocytogenes serotype 4b str. F2365 2798674 YP_015040.1 CDS LMOf2365_2452 NC_002973.6 2509221 2510696 R identified by match to protein family HMM PF00515; hypothetical protein complement(2509221..2510696) Listeria monocytogenes serotype 4b str. F2365 2797191 YP_015041.1 CDS LMOf2365_2453 NC_002973.6 2510781 2511278 R identified by match to protein family HMM PF00132; hexapeptide transferase complement(2510781..2511278) Listeria monocytogenes serotype 4b str. F2365 2797531 YP_015042.1 CDS LMOf2365_2454 NC_002973.6 2511282 2511935 R hydrolyzes pyrophosphate formed during serine-46-phosphorylated HPr dephosphorylation; pyrophosphatase PpaX complement(2511282..2511935) Listeria monocytogenes serotype 4b str. F2365 2797484 YP_015043.1 CDS lgt NC_002973.6 2511979 2512812 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(2511979..2512812) Listeria monocytogenes serotype 4b str. F2365 2797485 YP_015044.1 CDS hprK NC_002973.6 2512898 2513836 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(2512898..2513836) Listeria monocytogenes serotype 4b str. F2365 2797170 YP_015045.1 CDS LMOf2365_2457 NC_002973.6 2514023 2514376 R identified by match to protein family HMM PF04020; hypothetical protein complement(2514023..2514376) Listeria monocytogenes serotype 4b str. F2365 2797121 YP_015046.1 CDS LMOf2365_2458 NC_002973.6 2514385 2514585 R identified by similarity to OMNI:NTL01LI2612; match to protein family HMM PF04024; PspC domain-containing protein, truncated complement(2514385..2514585) Listeria monocytogenes serotype 4b str. F2365 2799688 YP_015047.1 CDS LMOf2365_2459 NC_002973.6 2514609 2515820 R identified by similarity to OMNI:NTL01LI2612; match to protein family HMM PF04024; PspC domain-containing protein complement(2514609..2515820) Listeria monocytogenes serotype 4b str. F2365 2797091 YP_015048.1 CDS LMOf2365_2460 NC_002973.6 2515887 2517149 R identified by similarity to OMNI:NTL01LI2613; hypothetical protein complement(2515887..2517149) Listeria monocytogenes serotype 4b str. F2365 2797092 YP_015049.1 CDS uvrA NC_002973.6 2517358 2520228 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(2517358..2520228) Listeria monocytogenes serotype 4b str. F2365 2799667 YP_015050.1 CDS uvrB NC_002973.6 2520236 2522212 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(2520236..2522212) Listeria monocytogenes serotype 4b str. F2365 2797088 YP_015051.1 CDS LMOf2365_2463 NC_002973.6 2522463 2522702 R identified by similarity to OMNI:NTL01LI2616; hypothetical protein complement(2522463..2522702) Listeria monocytogenes serotype 4b str. F2365 2799637 YP_015052.1 CDS LMOf2365_2464 NC_002973.6 2522723 2523370 R identified by similarity to OMNI:NTL01LI2617; HD domain-containing protein complement(2522723..2523370) Listeria monocytogenes serotype 4b str. F2365 2799638 YP_015053.1 CDS LMOf2365_2465 NC_002973.6 2523392 2523778 R identified by similarity to OMNI:NTL01LI2618; hypothetical protein complement(2523392..2523778) Listeria monocytogenes serotype 4b str. F2365 2797279 YP_015054.1 CDS LMOf2365_2466 NC_002973.6 2523884 2524189 R identified by match to protein family HMM PF01022; ArsR family transcriptional regulator complement(2523884..2524189) Listeria monocytogenes serotype 4b str. F2365 2797273 YP_015055.1 CDS LMOf2365_2467 NC_002973.6 2524457 2525116 R identified by similarity to SP:Q9X4T4; match to protein family HMM PF01895; phosphate transport system protein PhoU complement(2524457..2525116) Listeria monocytogenes serotype 4b str. F2365 2797065 YP_015056.1 CDS LMOf2365_2468 NC_002973.6 2525129 2525908 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein complement(2525129..2525908) Listeria monocytogenes serotype 4b str. F2365 2797066 YP_015057.1 CDS LMOf2365_2469 NC_002973.6 2525923 2526738 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein complement(2525923..2526738) Listeria monocytogenes serotype 4b str. F2365 2797070 YP_015058.1 CDS LMOf2365_2470 NC_002973.6 2526766 2527650 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease complement(2526766..2527650) Listeria monocytogenes serotype 4b str. F2365 2797075 YP_015059.1 CDS LMOf2365_2471 NC_002973.6 2527647 2528597 R identified by similarity to SP:Q58420; match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter permease complement(2527647..2528597) Listeria monocytogenes serotype 4b str. F2365 2797076 YP_015060.1 CDS LMOf2365_2472 NC_002973.6 2528664 2529572 R identified by match to protein family HMM PF01547; phosphate ABC transporter substrate-binding protein complement(2528664..2529572) Listeria monocytogenes serotype 4b str. F2365 2797082 YP_015061.1 CDS LMOf2365_2473 NC_002973.6 2529828 2531603 R identified by similarity to OMNI:NTL01LI2626; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM TIGR00229; histidine kinase complement(2529828..2531603) Listeria monocytogenes serotype 4b str. F2365 2797096 YP_015062.1 CDS phoP NC_002973.6 2531603 2532325 R identified by similarity to SP:P13792; match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator PhoP complement(2531603..2532325) Listeria monocytogenes serotype 4b str. F2365 2797100 YP_015063.1 CDS LMOf2365_2475 NC_002973.6 2532464 2533639 R identified by similarity to OMNI:NTL01LI2628; hypothetical protein complement(2532464..2533639) Listeria monocytogenes serotype 4b str. F2365 2797101 YP_015064.1 CDS cls-2 NC_002973.6 2533667 2535115 R identified by similarity to SP:O66043; match to protein family HMM PF00614; cardiolipin synthetase complement(2533667..2535115) Listeria monocytogenes serotype 4b str. F2365 2798747 YP_015065.1 CDS LMOf2365_2477 NC_002973.6 2535239 2536549 R identified by match to protein family HMM PF01551; M48 family peptidase complement(2535239..2536549) Listeria monocytogenes serotype 4b str. F2365 2797106 YP_015066.1 CDS LMOf2365_2478 NC_002973.6 2536669 2537874 R identified by match to protein family HMM PF00877; NLP/P60 family protein complement(2536669..2537874) Listeria monocytogenes serotype 4b str. F2365 2798707 YP_015067.1 CDS ftsX NC_002973.6 2537950 2538834 R identified by similarity to SP:O34876; match to protein family HMM PF02687; cell division ABC transporter permease FtsX complement(2537950..2538834) Listeria monocytogenes serotype 4b str. F2365 2798708 YP_015068.1 CDS ftsE NC_002973.6 2538824 2539510 R identified by similarity to SP:P10115; match to protein family HMM PF00005; cell division ATP-binding protein FtsE complement(2538824..2539510) Listeria monocytogenes serotype 4b str. F2365 2797107 YP_015069.1 CDS LMOf2365_2481 NC_002973.6 2540017 2540880 R identified by similarity to OMNI:NTL01LI2634; match to protein family HMM PF02588; YitT family protein complement(2540017..2540880) Listeria monocytogenes serotype 4b str. F2365 2797108 YP_015070.1 CDS prfB NC_002973.6 2540886 2541987 R recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 complement(join(2540886..2541914,2541916..2541987)) Listeria monocytogenes serotype 4b str. F2365 2799766 YP_015071.1 CDS secA NC_002973.6 2542072 2544585 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(2542072..2544585) Listeria monocytogenes serotype 4b str. F2365 2797551 YP_015072.1 CDS yfiA NC_002973.6 2544816 2545379 R identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; ribosomal subunit interface protein complement(2544816..2545379) Listeria monocytogenes serotype 4b str. F2365 2797111 YP_015073.1 CDS LMOf2365_2485 NC_002973.6 2545574 2546230 R identified by similarity to SP:P39147; comFC family protein complement(2545574..2546230) Listeria monocytogenes serotype 4b str. F2365 2797112 YP_015074.1 CDS LMOf2365_2486 NC_002973.6 2546223 2547542 R identified by similarity to SP:P39145; match to protein family HMM PF00271; helicase complement(2546223..2547542) Listeria monocytogenes serotype 4b str. F2365 2797436 YP_015075.1 CDS LMOf2365_2487 NC_002973.6 2547738 2548589 R identified by similarity to OMNI:NTL01LI2640; match to protein family HMM PF02645; match to protein family HMM TIGR00762; DegV family protein complement(2547738..2548589) Listeria monocytogenes serotype 4b str. F2365 2797222 YP_015076.1 CDS degU NC_002973.6 2548610 2549296 R identified by similarity to SP:P13800; match to protein family HMM PF00072; match to protein family HMM PF00196; DNA-binding response regulator DegU complement(2548610..2549296) Listeria monocytogenes serotype 4b str. F2365 2797137 YP_015077.1 CDS LMOf2365_2489 NC_002973.6 2549681 2550316 D identified by similarity to OMNI:NTL01LI2642; match to protein family HMM PF01205; match to protein family HMM TIGR00257; hypothetical protein 2549681..2550316 Listeria monocytogenes serotype 4b str. F2365 2797138 YP_015078.1 CDS LMOf2365_2490 NC_002973.6 2550318 2550863 D identified by similarity to OMNI:EF3079; match to protein family HMM PF00583; acetyltransferase 2550318..2550863 Listeria monocytogenes serotype 4b str. F2365 2797146 YP_015079.1 CDS LMOf2365_2491 NC_002973.6 2551039 2552097 D identified by similarity to SP:Q02115; match to protein family HMM PF03816; match to protein family HMM TIGR00350; transcriptional regulator 2551039..2552097 Listeria monocytogenes serotype 4b str. F2365 2797167 YP_015080.1 CDS LMOf2365_2492 NC_002973.6 2552135 2553187 R identified by match to protein family HMM PF00953; glycoside hydrolase complement(2552135..2553187) Listeria monocytogenes serotype 4b str. F2365 2797180 YP_015081.1 CDS LMOf2365_2493 NC_002973.6 2553195 2554319 R identified by similarity to GP:9955592; match to protein family HMM PF01188; match to protein family HMM PF02746; match to protein family HMM TIGR01928; N-acylamino acid racemase complement(2553195..2554319) Listeria monocytogenes serotype 4b str. F2365 2797181 YP_015082.1 CDS LMOf2365_2494 NC_002973.6 2554320 2555054 R identified by similarity to SP:P27620; match to protein family HMM PF03808; match to protein family HMM TIGR00696; teichoic acid biosynthesis protein A complement(2554320..2555054) Listeria monocytogenes serotype 4b str. F2365 2797200 YP_015083.1 CDS LMOf2365_2495 NC_002973.6 2555181 2556014 R identified by similarity to OMNI:NTL01LI2648; match to protein family HMM PF01476; LysM domain-containing protein complement(2555181..2556014) Listeria monocytogenes serotype 4b str. F2365 2797211 YP_015084.1 CDS ssb-2 NC_002973.6 2556405 2556770 R identified by similarity to SP:P37455; match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein complement(2556405..2556770) Listeria monocytogenes serotype 4b str. F2365 2797212 YP_015085.1 CDS fabZ NC_002973.6 2557021 2557455 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(2557021..2557455) Listeria monocytogenes serotype 4b str. F2365 2797230 YP_015086.1 CDS LMOf2365_2498 NC_002973.6 2557478 2558473 R identified by similarity to SP:P39751; match to protein family HMM TIGR00904; rod shape-determining protein MreB complement(2557478..2558473) Listeria monocytogenes serotype 4b str. F2365 2797243 YP_015087.1 CDS murA-1 NC_002973.6 2558636 2559928 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(2558636..2559928) Listeria monocytogenes serotype 4b str. F2365 2797253 YP_015088.1 CDS LMOf2365_2500 NC_002973.6 2560110 2560346 R identified by similarity to OMNI:NTL01LI2653; hypothetical protein complement(2560110..2560346) Listeria monocytogenes serotype 4b str. F2365 2797262 YP_015089.1 CDS atpC NC_002973.6 2560468 2560872 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(2560468..2560872) Listeria monocytogenes serotype 4b str. F2365 2797263 YP_015090.1 CDS atpD-2 NC_002973.6 2560894 2562315 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(2560894..2562315) Listeria monocytogenes serotype 4b str. F2365 2797449 YP_015091.1 CDS atpG NC_002973.6 2562376 2563248 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(2562376..2563248) Listeria monocytogenes serotype 4b str. F2365 2797460 YP_015092.1 CDS atpA-2 NC_002973.6 2563286 2564800 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(2563286..2564800) Listeria monocytogenes serotype 4b str. F2365 2797461 YP_015093.1 CDS atpH NC_002973.6 2564827 2565366 R Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta complement(2564827..2565366) Listeria monocytogenes serotype 4b str. F2365 2797471 YP_015094.1 CDS atpF NC_002973.6 2565363 2565875 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B complement(2565363..2565875) Listeria monocytogenes serotype 4b str. F2365 2797498 YP_015095.1 CDS atpE NC_002973.6 2565963 2566181 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(2565963..2566181) Listeria monocytogenes serotype 4b str. F2365 2797502 YP_015096.1 CDS atpB NC_002973.6 2566253 2566969 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(2566253..2566969) Listeria monocytogenes serotype 4b str. F2365 2797503 YP_015097.1 CDS atpI NC_002973.6 2566976 2567374 R identified by similarity to SP:P37816; match to protein family HMM PF05468; ATP synthase I complement(2566976..2567374) Listeria monocytogenes serotype 4b str. F2365 2797514 YP_015098.1 CDS LMOf2365_2510 NC_002973.6 2568205 2569344 R identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; UDP-N-acetylglucosamine 2-epimerase complement(2568205..2569344) Listeria monocytogenes serotype 4b str. F2365 2797523 YP_015099.1 CDS upp NC_002973.6 2569462 2570091 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(2569462..2570091) Listeria monocytogenes serotype 4b str. F2365 2797540 YP_015100.1 CDS glyA NC_002973.6 2570229 2571470 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(2570229..2571470) Listeria monocytogenes serotype 4b str. F2365 2799723 YP_015101.1 CDS LMOf2365_2513 NC_002973.6 2571606 2572013 R identified by match to protein family HMM PF01451; low molecular weight phosphotyrosine protein phosphatase complement(2571606..2572013) Listeria monocytogenes serotype 4b str. F2365 2799706 YP_015102.1 CDS LMOf2365_2514 NC_002973.6 2572010 2573047 R identified by similarity to OMNI:NTL01LI2667; match to protein family HMM PF01300; match to protein family HMM PF03481; match to protein family HMM TIGR00057; Sua5/YciO/YrdC/YwlC family protein complement(2572010..2573047) Listeria monocytogenes serotype 4b str. F2365 2799707 YP_015103.1 CDS LMOf2365_2515 NC_002973.6 2573348 2574199 R identified by similarity to OMNI:NTL01LI2668; match to protein family HMM TIGR00536; HemK family modification methylase complement(2573348..2574199) Listeria monocytogenes serotype 4b str. F2365 2798224 YP_015104.1 CDS prfA NC_002973.6 2574186 2575262 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(2574186..2575262) Listeria monocytogenes serotype 4b str. F2365 2799795 YP_015105.1 CDS LMOf2365_2517 NC_002973.6 2575285 2575860 R catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase complement(2575285..2575860) Listeria monocytogenes serotype 4b str. F2365 2799800 YP_015106.1 CDS thrB NC_002973.6 2575972 2576838 R catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase complement(2575972..2576838) Listeria monocytogenes serotype 4b str. F2365 2799801 YP_015107.1 CDS thrC NC_002973.6 2576838 2577893 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(2576838..2577893) Listeria monocytogenes serotype 4b str. F2365 2799815 YP_015108.1 CDS hom NC_002973.6 2577896 2579182 R catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase complement(2577896..2579182) Listeria monocytogenes serotype 4b str. F2365 2799844 YP_015109.1 CDS rpmE2 NC_002973.6 2579404 2579649 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(2579404..2579649) Listeria monocytogenes serotype 4b str. F2365 2798513 YP_015110.1 CDS gtcA NC_002973.6 2579751 2580188 R identified by similarity to SP:Q9ZH29; match to protein family HMM PF04138; cell wall teichoic acid glycosylation protein GtcA complement(2579751..2580188) Listeria monocytogenes serotype 4b str. F2365 2798680 YP_015111.1 CDS rho NC_002973.6 2580221 2581492 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(2580221..2581492) Listeria monocytogenes serotype 4b str. F2365 2798686 YP_015112.1 CDS murA-2 NC_002973.6 2581597 2582868 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(2581597..2582868) Listeria monocytogenes serotype 4b str. F2365 2798687 YP_015113.1 CDS LMOf2365_2525 NC_002973.6 2582985 2584058 R identified by similarity to OMNI:NTL01LI2680; match to protein family HMM PF03706; match to protein family HMM TIGR00374; hypothetical protein complement(2582985..2584058) Listeria monocytogenes serotype 4b str. F2365 2798692 YP_015114.1 CDS LMOf2365_2526 NC_002973.6 2584065 2585075 R identified by similarity to OMNI:SP1075; match to protein family HMM PF00534; glycosyl transferase CpoA complement(2584065..2585075) Listeria monocytogenes serotype 4b str. F2365 2798701 YP_015115.1 CDS LMOf2365_2527 NC_002973.6 2585083 2586366 R identified by match to protein family HMM PF00534; glycoside hydrolase complement(2585083..2586366) Listeria monocytogenes serotype 4b str. F2365 2798716 YP_015116.1 CDS LMOf2365_2528 NC_002973.6 2586687 2587541 R identified by similarity to SP:P42420; match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01859; fructose-bisphosphate aldolase complement(2586687..2587541) Listeria monocytogenes serotype 4b str. F2365 2798717 YP_015117.1 CDS LMOf2365_2529 NC_002973.6 2587709 2588629 R similar to YegS from E. coli; lipid kinase complement(2587709..2588629) Listeria monocytogenes serotype 4b str. F2365 2798722 YP_015118.1 CDS LMOf2365_2530 NC_002973.6 2588946 2591258 D identified by match to protein family HMM PF01510; N-acetylmuramoyl-L-alanine amidase 2588946..2591258 Listeria monocytogenes serotype 4b str. F2365 2798734 YP_015119.1 CDS pyrG NC_002973.6 2591311 2592909 R CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(2591311..2592909) Listeria monocytogenes serotype 4b str. F2365 2798740 YP_015120.1 CDS rpoE NC_002973.6 2593274 2593810 R participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; DNA-directed RNA polymerase subunit delta complement(2593274..2593810) Listeria monocytogenes serotype 4b str. F2365 2798741 YP_015121.1 CDS argS NC_002973.6 2594176 2595846 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(2594176..2595846) Listeria monocytogenes serotype 4b str. F2365 2798752 YP_015122.1 CDS LMOf2365_2534 NC_002973.6 2595843 2596277 R identified by similarity to OMNI:SA0662; hypothetical protein complement(2595843..2596277) Listeria monocytogenes serotype 4b str. F2365 2798759 YP_015123.1 CDS LMOf2365_2535 NC_002973.6 2596370 2597023 R identified by similarity to OMNI:NTL01LI2690; match to protein family HMM PF02163; hypothetical protein complement(2596370..2597023) Listeria monocytogenes serotype 4b str. F2365 2798764 YP_015124.1 CDS LMOf2365_2536 NC_002973.6 2597097 2597282 D identified by similarity to SP:Q01468; match to protein family HMM PF01361; match to protein family HMM TIGR00013; 4-oxalocrotonate tautomerase 2597097..2597282 Listeria monocytogenes serotype 4b str. F2365 2798777 YP_015125.1 CDS LMOf2365_2537 NC_002973.6 2597317 2598639 R identified by similarity to GP:16415246; match to protein family HMM PF01966; HD domain-containing protein complement(2597317..2598639) Listeria monocytogenes serotype 4b str. F2365 2798778 YP_015126.1 CDS LMOf2365_2538 NC_002973.6 2598654 2599490 R identified by match to protein family HMM PF03099; biotin/lipoate A/B protein ligase complement(2598654..2599490) Listeria monocytogenes serotype 4b str. F2365 2798785 YP_015127.1 CDS LMOf2365_2539 NC_002973.6 2599600 2599734 R hypothetical protein complement(2599600..2599734) Listeria monocytogenes serotype 4b str. F2365 2798792 YP_015128.1 CDS LMOf2365_2540 NC_002973.6 2599808 2600008 R identified by similarity to OMNI:NTL01LI2694; hypothetical protein complement(2599808..2600008) Listeria monocytogenes serotype 4b str. F2365 2798793 YP_015129.1 CDS LMOf2365_2541 NC_002973.6 2600031 2600354 R identified by similarity to OMNI:NTL01LI2695; match to protein family HMM TIGR01655; hypothetical protein complement(2600031..2600354) Listeria monocytogenes serotype 4b str. F2365 2798799 YP_015130.1 CDS LMOf2365_2542 NC_002973.6 2600508 2602148 R identified by match to protein family HMM PF00496; solute-binding family 5 protein complement(2600508..2602148) Listeria monocytogenes serotype 4b str. F2365 2798805 YP_015131.1 CDS LMOf2365_2543 NC_002973.6 2602304 2602918 R identified by similarity to OMNI:NTL01LI2697; hypothetical protein complement(2602304..2602918) Listeria monocytogenes serotype 4b str. F2365 2798810 YP_015132.1 CDS LMOf2365_2544 NC_002973.6 2602942 2603574 R identified by similarity to SP:P21369; amidase complement(2602942..2603574) Listeria monocytogenes serotype 4b str. F2365 2798811 YP_015133.1 CDS LMOf2365_2545 NC_002973.6 2603575 2604099 R identified by similarity to SP:P45862; match to protein family HMM PF01872; hypothetical protein complement(2603575..2604099) Listeria monocytogenes serotype 4b str. F2365 2799861 YP_015134.1 CDS LMOf2365_2546 NC_002973.6 2604102 2605100 R identified by match to protein family HMM PF00107; zinc-dependent alcohol dehydrogenase complement(2604102..2605100) Listeria monocytogenes serotype 4b str. F2365 2799858 YP_015135.1 CDS LMOf2365_2547 NC_002973.6 2605197 2605469 R identified by similarity to OMNI:NTL01LI2701; hypothetical protein complement(2605197..2605469) Listeria monocytogenes serotype 4b str. F2365 2799859 YP_015136.1 CDS LMOf2365_2548 NC_002973.6 2605518 2606429 R identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein complement(2605518..2606429) Listeria monocytogenes serotype 4b str. F2365 2799886 YP_015137.1 CDS LMOf2365_2549 NC_002973.6 2606807 2607646 R identified by similarity to GP:15023577; match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD-superfamily cof-like hydrolase complement(2606807..2607646) Listeria monocytogenes serotype 4b str. F2365 2799878 YP_015138.1 CDS LMOf2365_2550 NC_002973.6 2607749 2608624 D identified by similarity to GP:16415258; match to protein family HMM PF06028; lipoprotein 2607749..2608624 Listeria monocytogenes serotype 4b str. F2365 2799875 YP_015139.1 CDS LMOf2365_2551 NC_002973.6 2608635 2608928 D identified by similarity to GP:16415259; match to protein family HMM PF02619; match to protein family HMM PF03992; hypothetical protein 2608635..2608928 Listeria monocytogenes serotype 4b str. F2365 2799876 YP_015140.1 CDS LMOf2365_2552 NC_002973.6 2609153 2609821 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2609153..2609821) Listeria monocytogenes serotype 4b str. F2365 2799885 YP_015141.1 CDS LMOf2365_2553 NC_002973.6 2609821 2610909 R identified by match to protein family HMM PF02687; ABC transporter permease complement(2609821..2610909) Listeria monocytogenes serotype 4b str. F2365 2799892 YP_015142.1 CDS LMOf2365_2554 NC_002973.6 2610988 2612367 R identified by similarity to SP:P23545; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(2610988..2612367) Listeria monocytogenes serotype 4b str. F2365 2799893 YP_015143.1 CDS LMOf2365_2555 NC_002973.6 2612364 2613041 R identified by similarity to SP:P13792; match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2612364..2613041) Listeria monocytogenes serotype 4b str. F2365 2799184 YP_015144.1 CDS fdhD NC_002973.6 2613088 2613873 R involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein complement(2613088..2613873) Listeria monocytogenes serotype 4b str. F2365 2799073 YP_015145.1 CDS LMOf2365_2557 NC_002973.6 2613935 2614411 R identified by similarity to SP:O05396; hypothetical protein complement(2613935..2614411) Listeria monocytogenes serotype 4b str. F2365 2799909 YP_015146.1 CDS LMOf2365_2558 NC_002973.6 2614411 2617398 R identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01591; formate dehydrogenase subunit alpha complement(2614411..2617398) Listeria monocytogenes serotype 4b str. F2365 2799910 YP_015147.1 CDS LMOf2365_2559 NC_002973.6 2617896 2618738 D identified by similarity to OMNI:NTL01LI2714; match to protein family HMM PF01887; hypothetical protein 2617896..2618738 Listeria monocytogenes serotype 4b str. F2365 2799911 YP_015148.1 CDS lmrB-2 NC_002973.6 2618788 2620269 R identified by similarity to SP:O35018; match to protein family HMM TIGR00711; lincomycin resistance protein LmrB complement(2618788..2620269) Listeria monocytogenes serotype 4b str. F2365 2799908 YP_015149.1 CDS LMOf2365_2561 NC_002973.6 2620370 2621257 R identified by similarity to SP:O31500; match to protein family HMM PF00440; TetR family transcriptional regulator complement(2620370..2621257) Listeria monocytogenes serotype 4b str. F2365 2799507 YP_015150.1 CDS LMOf2365_2562 NC_002973.6 2626939 2627031 R hypothetical protein complement(2626939..2627031) Listeria monocytogenes serotype 4b str. F2365 2799519 YP_015151.1 CDS LMOf2365_2563 NC_002973.6 2627049 2628077 R identified by similarity to SP:P50863; ATP-binding Mrp/Nbp35 family protein complement(2627049..2628077) Listeria monocytogenes serotype 4b str. F2365 2799520 YP_015152.1 CDS LMOf2365_2564 NC_002973.6 2628346 2629872 D identified by match to protein family HMM PF01832; N-acetylmuramoyl-L-alanine amidase 2628346..2629872 Listeria monocytogenes serotype 4b str. F2365 2799528 YP_015153.1 CDS morA NC_002973.6 2629913 2630764 R identified by similarity to SP:Q02198; match to protein family HMM PF00248; morphine 6-dehydrogenase complement(2629913..2630764) Listeria monocytogenes serotype 4b str. F2365 2799530 YP_015154.1 CDS LMOf2365_2566 NC_002973.6 2630786 2631208 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(2630786..2631208) Listeria monocytogenes serotype 4b str. F2365 2799600 YP_015155.1 CDS LMOf2365_2567 NC_002973.6 2631490 2631729 D hypothetical protein 2631490..2631729 Listeria monocytogenes serotype 4b str. F2365 2799601 YP_015156.1 CDS LMOf2365_2568 NC_002973.6 2631777 2632646 D lipoprotein 2631777..2632646 Listeria monocytogenes serotype 4b str. F2365 2799597 YP_015157.1 CDS rpsI NC_002973.6 2632787 2633179 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(2632787..2633179) Listeria monocytogenes serotype 4b str. F2365 2797016 YP_015158.1 CDS rplM NC_002973.6 2633201 2633638 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(2633201..2633638) Listeria monocytogenes serotype 4b str. F2365 2798086 YP_015159.1 CDS truA NC_002973.6 2633833 2634579 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(2633833..2634579) Listeria monocytogenes serotype 4b str. F2365 2798894 YP_015160.1 CDS LMOf2365_2572 NC_002973.6 2634585 2635382 R identified by match to protein family HMM PF02361; cobalt ABC transporter permease complement(2634585..2635382) Listeria monocytogenes serotype 4b str. F2365 2798895 YP_015161.1 CDS cbiO NC_002973.6 2635385 2636251 R with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene; cobalt transporter ATP-binding subunit complement(2635385..2636251) Listeria monocytogenes serotype 4b str. F2365 2797377 YP_015162.1 CDS cbiO NC_002973.6 2636227 2637066 R with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene; cobalt transporter ATP-binding subunit complement(2636227..2637066) Listeria monocytogenes serotype 4b str. F2365 2798070 YP_015163.1 CDS LMOf2365_2575 NC_002973.6 2637197 2637859 D identified by match to protein family HMM PF02308; MgtC family protein 2637197..2637859 Listeria monocytogenes serotype 4b str. F2365 2797410 YP_015164.1 CDS LMOf2365_2576 NC_002973.6 2637980 2638870 D identified by match to protein family HMM PF03069; acetamidase/formamidase 2637980..2638870 Listeria monocytogenes serotype 4b str. F2365 2797411 YP_015165.1 CDS LMOf2365_2577 NC_002973.6 2638902 2639996 R identified by similarity to OMNI:NTL01LI2735; hypothetical protein complement(2638902..2639996) Listeria monocytogenes serotype 4b str. F2365 2798973 YP_015166.1 CDS rplQ NC_002973.6 2640211 2640618 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(2640211..2640618) Listeria monocytogenes serotype 4b str. F2365 2799397 YP_015167.1 CDS rpoA NC_002973.6 2640635 2641579 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(2640635..2641579) Listeria monocytogenes serotype 4b str. F2365 2799197 YP_015168.1 CDS rpsK NC_002973.6 2641689 2642078 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(2641689..2642078) Listeria monocytogenes serotype 4b str. F2365 2799198 YP_015169.1 CDS rpsM NC_002973.6 2642101 2642466 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(2642101..2642466) Listeria monocytogenes serotype 4b str. F2365 2798724 YP_015170.1 CDS rpmJ NC_002973.6 2642485 2642598 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(2642485..2642598) Listeria monocytogenes serotype 4b str. F2365 2798227 YP_015171.1 CDS infA NC_002973.6 2642702 2642920 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(2642702..2642920) Listeria monocytogenes serotype 4b str. F2365 2797840 YP_015172.1 CDS adk NC_002973.6 2643307 2643954 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(2643307..2643954) Listeria monocytogenes serotype 4b str. F2365 2797109 YP_015173.1 CDS secY NC_002973.6 2644014 2645309 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(2644014..2645309) Listeria monocytogenes serotype 4b str. F2365 2797110 YP_015174.1 CDS rplO NC_002973.6 2645309 2645749 R late assembly protein; 50S ribosomal protein L15 complement(2645309..2645749) Listeria monocytogenes serotype 4b str. F2365 2797272 YP_015175.1 CDS rpmD NC_002973.6 2645805 2645984 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(2645805..2645984) Listeria monocytogenes serotype 4b str. F2365 2797276 YP_015176.1 CDS rpsE NC_002973.6 2646001 2646504 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(2646001..2646504) Listeria monocytogenes serotype 4b str. F2365 2797554 YP_015177.1 CDS rplR NC_002973.6 2646526 2646885 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(2646526..2646885) Listeria monocytogenes serotype 4b str. F2365 2797277 YP_015178.1 CDS rplF NC_002973.6 2646925 2647461 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(2646925..2647461) Listeria monocytogenes serotype 4b str. F2365 2797441 YP_015179.1 CDS rpsH NC_002973.6 2647492 2647890 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(2647492..2647890) Listeria monocytogenes serotype 4b str. F2365 2797442 YP_015180.1 CDS rpsN NC_002973.6 2647921 2648106 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 complement(2647921..2648106) Listeria monocytogenes serotype 4b str. F2365 2797495 YP_015181.1 CDS rplE NC_002973.6 2648138 2648677 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(2648138..2648677) Listeria monocytogenes serotype 4b str. F2365 2797741 YP_015182.1 CDS rplX NC_002973.6 2648704 2649015 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(2648704..2649015) Listeria monocytogenes serotype 4b str. F2365 2797682 YP_015183.1 CDS rplN NC_002973.6 2649053 2649421 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(2649053..2649421) Listeria monocytogenes serotype 4b str. F2365 2798210 YP_015184.1 CDS rpsQ NC_002973.6 2649501 2649764 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(2649501..2649764) Listeria monocytogenes serotype 4b str. F2365 2798211 YP_015185.1 CDS rpmC NC_002973.6 2649791 2649982 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(2649791..2649982) Listeria monocytogenes serotype 4b str. F2365 2799744 YP_015186.1 CDS rplP NC_002973.6 2649972 2650406 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(2649972..2650406) Listeria monocytogenes serotype 4b str. F2365 2798264 YP_015187.1 CDS rpsC NC_002973.6 2650409 2651065 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(2650409..2651065) Listeria monocytogenes serotype 4b str. F2365 2798628 YP_015188.1 CDS rplV NC_002973.6 2651069 2651425 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(2651069..2651425) Listeria monocytogenes serotype 4b str. F2365 2798706 YP_015189.1 CDS rpsS NC_002973.6 2651446 2651724 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(2651446..2651724) Listeria monocytogenes serotype 4b str. F2365 2798774 YP_015190.1 CDS rplB NC_002973.6 2651812 2652645 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(2651812..2652645) Listeria monocytogenes serotype 4b str. F2365 2798775 YP_015191.1 CDS rplW NC_002973.6 2652686 2652970 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(2652686..2652970) Listeria monocytogenes serotype 4b str. F2365 2799866 YP_015192.1 CDS rplD NC_002973.6 2652970 2653593 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(2652970..2653593) Listeria monocytogenes serotype 4b str. F2365 2799108 YP_015193.1 CDS rplC NC_002973.6 2653619 2654248 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(2653619..2654248) Listeria monocytogenes serotype 4b str. F2365 2799502 YP_015194.1 CDS rpsJ NC_002973.6 2654283 2654591 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(2654283..2654591) Listeria monocytogenes serotype 4b str. F2365 2797060 YP_015195.1 CDS LMOf2365_2607 NC_002973.6 2654953 2655753 R identified by match to protein family HMM PF02361; cobalt transport protein complement(2654953..2655753) Listeria monocytogenes serotype 4b str. F2365 2797061 YP_015196.1 CDS LMOf2365_2608 NC_002973.6 2655774 2656733 R catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase complement(2655774..2656733) Listeria monocytogenes serotype 4b str. F2365 2799480 YP_015197.1 CDS LMOf2365_2609 NC_002973.6 2656815 2657897 R identified by similarity to SP:P41780; match to protein family HMM PF02424; thiamine biosynthesis lipoprotein ApbE complement(2656815..2657897) Listeria monocytogenes serotype 4b str. F2365 2798259 YP_015198.1 CDS LMOf2365_2610 NC_002973.6 2658061 2658960 R lipoprotein complement(2658061..2658960) Listeria monocytogenes serotype 4b str. F2365 2799573 YP_015199.1 CDS LMOf2365_2611 NC_002973.6 2659408 2661294 D identified by match to protein family HMM PF00070; pyridine nucleotide-disulfide oxidoreductase 2659408..2661294 Listeria monocytogenes serotype 4b str. F2365 2799574 YP_015200.1 CDS LMOf2365_2612 NC_002973.6 2661470 2661904 D identified by similarity to OMNI:NTL01LI2770; hypothetical protein 2661470..2661904 Listeria monocytogenes serotype 4b str. F2365 2798937 YP_015201.1 CDS LMOf2365_2613 NC_002973.6 2661937 2662479 D identified by similarity to GP:18145889; hypothetical protein 2661937..2662479 Listeria monocytogenes serotype 4b str. F2365 2799005 YP_015202.1 CDS LMOf2365_2614 NC_002973.6 2662501 2663481 D identified by match to protein family HMM PF00348; polyprenyl synthetase 2662501..2663481 Listeria monocytogenes serotype 4b str. F2365 2799006 YP_015203.1 CDS LMOf2365_2615 NC_002973.6 2663571 2664902 D identified by match to protein family HMM PF00149; serine/threonine protein phosphatase 2663571..2664902 Listeria monocytogenes serotype 4b str. F2365 2799618 YP_015204.1 CDS LMOf2365_2616 NC_002973.6 2664949 2665935 R identified by similarity to OMNI:NTL01LI2774; hypothetical protein complement(2664949..2665935) Listeria monocytogenes serotype 4b str. F2365 2799377 YP_015205.1 CDS LMOf2365_2617 NC_002973.6 2666041 2666784 R identified by similarity to GP:8894743; hypothetical protein complement(2666041..2666784) Listeria monocytogenes serotype 4b str. F2365 2799392 YP_015206.1 CDS LMOf2365_2618 NC_002973.6 2666785 2667504 R identified by similarity to OMNI:NTL01LI2777; hypothetical protein complement(2666785..2667504) Listeria monocytogenes serotype 4b str. F2365 2799393 YP_015207.1 CDS LMOf2365_2619 NC_002973.6 2667464 2668213 R identified by match to protein family HMM PF02633; creatinine amidohydrolase complement(2667464..2668213) Listeria monocytogenes serotype 4b str. F2365 2799007 YP_015208.1 CDS LMOf2365_2620 NC_002973.6 2668226 2669218 R identified by match to protein family HMM PF02126; phosphotriesterase complement(2668226..2669218) Listeria monocytogenes serotype 4b str. F2365 2798111 YP_015209.1 CDS ulaA NC_002973.6 2669288 2670586 R membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC complement(2669288..2670586) Listeria monocytogenes serotype 4b str. F2365 2798112 YP_015210.1 CDS LMOf2365_2622 NC_002973.6 2670613 2670885 R identified by similarity to OMNI:NTL01BH0223; match to protein family HMM PF02302; PTS system lactose/cellobiose specific transporter subunit IIB complement(2670613..2670885) Listeria monocytogenes serotype 4b str. F2365 2799469 YP_015211.1 CDS LMOf2365_2623 NC_002973.6 2670888 2671322 R identified by match to protein family HMM PF00359; PTS system IIA component domain-containing protein complement(2670888..2671322) Listeria monocytogenes serotype 4b str. F2365 2799428 YP_015212.1 CDS LMOf2365_2624 NC_002973.6 2671394 2671489 R hypothetical protein complement(2671394..2671489) Listeria monocytogenes serotype 4b str. F2365 2798083 YP_015213.1 CDS LMOf2365_2625 NC_002973.6 2671515 2673581 R identified by match to protein family HMM PF00359; match to protein family HMM PF00874; match to protein family HMM PF02302; PTS system transporter subunit IIA complement(2671515..2673581) Listeria monocytogenes serotype 4b str. F2365 2798084 YP_015214.1 CDS LMOf2365_2626 NC_002973.6 2673736 2674218 R hypothetical protein complement(2673736..2674218) Listeria monocytogenes serotype 4b str. F2365 2799417 YP_015215.1 CDS LMOf2365_2627 NC_002973.6 2674215 2674859 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2674215..2674859) Listeria monocytogenes serotype 4b str. F2365 2798933 YP_015216.1 CDS LMOf2365_2628 NC_002973.6 2674871 2675620 R hypothetical protein complement(2674871..2675620) Listeria monocytogenes serotype 4b str. F2365 2798934 YP_015217.1 CDS LMOf2365_2629 NC_002973.6 2675622 2676320 R hypothetical protein complement(2675622..2676320) Listeria monocytogenes serotype 4b str. F2365 2797401 YP_015218.1 CDS LMOf2365_2630 NC_002973.6 2676307 2677092 R hypothetical protein complement(2676307..2677092) Listeria monocytogenes serotype 4b str. F2365 2797955 YP_015219.1 CDS LMOf2365_2631 NC_002973.6 2677158 2677565 R identified by similarity to GP:528976; hypothetical protein complement(2677158..2677565) Listeria monocytogenes serotype 4b str. F2365 2797591 YP_015220.1 CDS tuf NC_002973.6 2677749 2678936 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(2677749..2678936) Listeria monocytogenes serotype 4b str. F2365 2797592 YP_015221.1 CDS fusA NC_002973.6 2679045 2681132 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(2679045..2681132) Listeria monocytogenes serotype 4b str. F2365 2799673 YP_015222.1 CDS rpsG NC_002973.6 2681198 2681668 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(2681198..2681668) Listeria monocytogenes serotype 4b str. F2365 2799680 YP_015223.1 CDS rpsL NC_002973.6 2681699 2682112 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(2681699..2682112) Listeria monocytogenes serotype 4b str. F2365 2797571 YP_015224.1 CDS dgt NC_002973.6 2682305 2683702 R dGTPase type 3 subfamily, presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(2682305..2683702) Listeria monocytogenes serotype 4b str. F2365 2797586 YP_015225.1 CDS LMOf2365_2637 NC_002973.6 2683718 2684197 R identified by match to protein family HMM PF00583; acetyltransferase complement(2683718..2684197) Listeria monocytogenes serotype 4b str. F2365 2797587 YP_015226.1 CDS LMOf2365_2638 NC_002973.6 2684358 2685827 D identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 2684358..2685827 Listeria monocytogenes serotype 4b str. F2365 2797234 YP_015227.1 CDS rpe-3 NC_002973.6 2685882 2686526 R identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; ribulose-phosphate 3-epimerase complement(2685882..2686526) Listeria monocytogenes serotype 4b str. F2365 2799719 YP_015228.1 CDS tkt-3 NC_002973.6 2686523 2688538 R identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; transketolase complement(2686523..2688538) Listeria monocytogenes serotype 4b str. F2365 2797914 YP_015229.1 CDS LMOf2365_2641 NC_002973.6 2688572 2689246 R identified by match to protein family HMM PF00834; ribulose-phosphate 3-epimerase complement(2688572..2689246) Listeria monocytogenes serotype 4b str. F2365 2797915 YP_015230.1 CDS rpiB-3 NC_002973.6 2689255 2689695 R identified by similarity to SP:P37351; match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120; ribose 5-phosphate isomerase B complement(2689255..2689695) Listeria monocytogenes serotype 4b str. F2365 2797913 YP_015231.1 CDS LMOf2365_2643 NC_002973.6 2689890 2690921 R identified by match to protein family HMM PF00107; zinc-dependent alcohol dehydrogenase complement(2689890..2690921) Listeria monocytogenes serotype 4b str. F2365 2797750 YP_015232.1 CDS LMOf2365_2644 NC_002973.6 2690923 2691975 R identified by match to protein family HMM PF00107; zinc-dependent alcohol dehydrogenase complement(2690923..2691975) Listeria monocytogenes serotype 4b str. F2365 2797791 YP_015233.1 CDS LMOf2365_2645 NC_002973.6 2692012 2693283 R identified by similarity to SP:P37189; match to protein family HMM PF03611; PTS system galactitol-specific transporter subunit IIC complement(2692012..2693283) Listeria monocytogenes serotype 4b str. F2365 2797792 YP_015234.1 CDS LMOf2365_2646 NC_002973.6 2693344 2693625 R identified by similarity to SP:P37188; match to protein family HMM PF02302; PTS system galactitol-specific transporter subunit IIB complement(2693344..2693625) Listeria monocytogenes serotype 4b str. F2365 2797659 YP_015235.1 CDS LMOf2365_2647 NC_002973.6 2693683 2694147 R identified by match to protein family HMM PF00359; PTS system transporter subunit IIA complement(2693683..2694147) Listeria monocytogenes serotype 4b str. F2365 2799816 YP_015236.1 CDS LMOf2365_2648 NC_002973.6 2694181 2696250 R identified by match to protein family HMM PF00359; match to protein family HMM PF00874; PTS system IIA component domain-containing protein complement(2694181..2696250) Listeria monocytogenes serotype 4b str. F2365 2799817 YP_015237.1 CDS LMOf2365_2649 NC_002973.6 2696620 2697432 R hypothetical protein complement(2696620..2697432) Listeria monocytogenes serotype 4b str. F2365 2799753 YP_015238.1 CDS LMOf2365_2650 NC_002973.6 2697506 2697868 R identified by similarity to OMNI:NTL01LI2801; match to protein family HMM PF04237; hypothetical protein complement(2697506..2697868) Listeria monocytogenes serotype 4b str. F2365 2799778 YP_015239.1 CDS LMOf2365_2651 NC_002973.6 2697865 2698233 R identified by match to protein family HMM PF00903; hypothetical protein complement(2697865..2698233) Listeria monocytogenes serotype 4b str. F2365 2799749 YP_015240.1 CDS LMOf2365_2652 NC_002973.6 2698279 2699085 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(2698279..2699085) Listeria monocytogenes serotype 4b str. F2365 2799750 YP_015241.1 CDS LMOf2365_2653 NC_002973.6 2699201 2699671 D identified by match to protein family HMM PF00582; universal stress protein 2699201..2699671 Listeria monocytogenes serotype 4b str. F2365 2798207 YP_015242.1 CDS rpiB-4 NC_002973.6 2699717 2700172 D catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 2699717..2700172 Listeria monocytogenes serotype 4b str. F2365 2798233 YP_015243.1 CDS LMOf2365_2655 NC_002973.6 2700371 2700712 D identified by similarity to GP:10119930; hypothetical protein 2700371..2700712 Listeria monocytogenes serotype 4b str. F2365 2798234 YP_015244.1 CDS LMOf2365_2656 NC_002973.6 2700725 2701981 D identified by match to protein family HMM PF00817; ImpB/MucB/SamB family protein 2700725..2701981 Listeria monocytogenes serotype 4b str. F2365 2798508 YP_015245.1 CDS LMOf2365_2657 NC_002973.6 2701983 2702795 R identified by match to protein family HMM PF00561; alpha/beta fold family hydrolase complement(2701983..2702795) Listeria monocytogenes serotype 4b str. F2365 2798771 YP_015246.1 CDS kdpE NC_002973.6 2702836 2703531 R identified by similarity to SP:P21866; match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator KdpE complement(2702836..2703531) Listeria monocytogenes serotype 4b str. F2365 2799869 YP_015247.1 CDS kdpD NC_002973.6 2703528 2706218 R identified by similarity to SP:P94608; match to protein family HMM PF00512; match to protein family HMM PF00582; match to protein family HMM PF02518; match to protein family HMM PF02702; sensor histidine kinase KdpD complement(2703528..2706218) Listeria monocytogenes serotype 4b str. F2365 2799870 YP_015248.1 CDS kdpC NC_002973.6 2706234 2706806 R identified by match to protein family HMM PF02669; match to protein family HMM TIGR00681; K+-transporting ATPase subunit C complement(2706234..2706806) Listeria monocytogenes serotype 4b str. F2365 2799139 YP_015249.1 CDS kdpB NC_002973.6 2706821 2708866 R One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B complement(2706821..2708866) Listeria monocytogenes serotype 4b str. F2365 2799195 YP_015250.1 CDS kdpA NC_002973.6 2708878 2710563 R catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A complement(2708878..2710563) Listeria monocytogenes serotype 4b str. F2365 2799100 YP_015251.1 CDS LMOf2365_2663 NC_002973.6 2710903 2711208 D identified by similarity to SP:P46318; match to protein family HMM PF02302; PTS system beta-glucoside-specific transporter subunit IIB 2710903..2711208 Listeria monocytogenes serotype 4b str. F2365 2799318 YP_015252.1 CDS LMOf2365_2664 NC_002973.6 2711343 2712650 D identified by similarity to SP:P46317; match to protein family HMM PF02378; match to protein family HMM TIGR00410; PTS system beta-glucoside-specific transporter subunit IIC 2711343..2712650 Listeria monocytogenes serotype 4b str. F2365 2799319 YP_015253.1 CDS LMOf2365_2665 NC_002973.6 2712687 2712989 D identified by similarity to SP:P46319; match to protein family HMM PF02255; PTS system beta-glucoside-specific transporter subunit IIA 2712687..2712989 Listeria monocytogenes serotype 4b str. F2365 2799332 YP_015254.1 CDS LMOf2365_2666 NC_002973.6 2713011 2714132 R identified by match to protein family HMM PF01098; cell cycle protein FtsW complement(2713011..2714132) Listeria monocytogenes serotype 4b str. F2365 2797022 YP_015255.1 CDS LMOf2365_2667 NC_002973.6 2714129 2715244 R identified by match to protein family HMM PF01098; cell cycle protein FtsW complement(2714129..2715244) Listeria monocytogenes serotype 4b str. F2365 2797023 YP_015256.1 CDS LMOf2365_2668 NC_002973.6 2715260 2717830 R identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01524; magnesium-translocating P-type ATPase complement(2715260..2717830) Listeria monocytogenes serotype 4b str. F2365 2798092 YP_015257.1 CDS LMOf2365_2669 NC_002973.6 2718384 2718950 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2718384..2718950) Listeria monocytogenes serotype 4b str. F2365 2798943 YP_015258.1 CDS LMOf2365_2670 NC_002973.6 2719112 2720887 D cell wall hydrolase; muramidase-2 like protein in Enterococcus faecalis; in Enterococcus faecalis a mutant in this gene has no effect on virulence in mouse models; Listeria monocytogenes MurA in involved in general autolysis; contains an N-terminal muramidase domain and C-terminal LysM repeats for cell wall-anchoring; autolysin 2719112..2720887 Listeria monocytogenes serotype 4b str. F2365 2798962 YP_015259.1 CDS LMOf2365_2671 NC_002973.6 2721118 2721447 R identified by similarity to OMNI:NTL01LI2821; match to protein family HMM PF06153; hypothetical protein complement(2721118..2721447) Listeria monocytogenes serotype 4b str. F2365 2798963 YP_015260.1 CDS tmk NC_002973.6 2721556 2722182 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(2721556..2722182) Listeria monocytogenes serotype 4b str. F2365 2799571 YP_015261.1 CDS LMOf2365_2673 NC_002973.6 2722235 2723614 R identified by similarity to SP:P37536; match to protein family HMM PF01276; Orn/Lys/Arg decarboxylase complement(2722235..2723614) Listeria monocytogenes serotype 4b str. F2365 2798876 YP_015262.1 CDS LMOf2365_2674 NC_002973.6 2723798 2724787 D with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 2723798..2724787 Listeria monocytogenes serotype 4b str. F2365 2798877 YP_015263.1 CDS LMOf2365_2675 NC_002973.6 2724809 2725405 D identified by similarity to SP:P45510; match to protein family HMM PF02734; dihydroxyacetone kinase, Dak2 subunit 2724809..2725405 Listeria monocytogenes serotype 4b str. F2365 2798903 YP_015264.1 CDS LMOf2365_2676 NC_002973.6 2725409 2725783 D identified by similarity to OMNI:NTL01LI2826; match to protein family HMM PF03610; PTS system mannnose-specific transporter subunit IIA 2725409..2725783 Listeria monocytogenes serotype 4b str. F2365 2797117 YP_015265.1 CDS LMOf2365_2677 NC_002973.6 2725889 2726740 D identified by match to protein family HMM PF01418; RpiR family phosphosugar-binding transcriptional regulator 2725889..2726740 Listeria monocytogenes serotype 4b str. F2365 2798479 YP_015266.1 CDS LMOf2365_2678 NC_002973.6 2726859 2727698 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; cof family hydrolase 2726859..2727698 Listeria monocytogenes serotype 4b str. F2365 2798480 YP_015267.1 CDS LMOf2365_2679 NC_002973.6 2727725 2728171 R identified by match to protein family HMM PF00293; MutT/nudix family protein complement(2727725..2728171) Listeria monocytogenes serotype 4b str. F2365 2799049 YP_015268.1 CDS LMOf2365_2680 NC_002973.6 2728287 2729129 D identified by match to protein family HMM PF00248; aldo/keto reductase oxidoreductase 2728287..2729129 Listeria monocytogenes serotype 4b str. F2365 2799683 YP_015269.1 CDS LMOf2365_2681 NC_002973.6 2729175 2729420 R identified by similarity to OMNI:NTL01LI2830; hypothetical protein complement(2729175..2729420) Listeria monocytogenes serotype 4b str. F2365 2799684 YP_015270.1 CDS recR NC_002973.6 2729435 2730031 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(2729435..2730031) Listeria monocytogenes serotype 4b str. F2365 2797274 YP_015271.1 CDS LMOf2365_2683 NC_002973.6 2730140 2730457 R identified by similarity to OMNI:NTL01LI2832; match to protein family HMM PF02575; match to protein family HMM TIGR00103; hypothetical protein complement(2730140..2730457) Listeria monocytogenes serotype 4b str. F2365 2797275 YP_015272.1 CDS dnaX NC_002973.6 2730487 2732226 R identified by similarity to SP:P09122; match to protein family HMM PF00004; DNA polymerase III subunits gamma and tau complement(2730487..2732226) Listeria monocytogenes serotype 4b str. F2365 2797588 YP_015273.1 CDS LMOf2365_2685 NC_002973.6 2732475 2732939 R identified by similarity to OMNI:NTL01LI2834; hypothetical protein complement(2732475..2732939) Listeria monocytogenes serotype 4b str. F2365 2797614 YP_015274.1 CDS LMOf2365_2686 NC_002973.6 2732957 2733139 R identified by similarity to OMNI:NTL01LI2835; hypothetical protein complement(2732957..2733139) Listeria monocytogenes serotype 4b str. F2365 2797615 YP_015275.1 CDS LMOf2365_2687 NC_002973.6 2733142 2733363 R identified by similarity to OMNI:NTL01LI2836; hypothetical protein complement(2733142..2733363) Listeria monocytogenes serotype 4b str. F2365 2797937 YP_015276.1 CDS LMOf2365_2688 NC_002973.6 2733498 2734862 R identified by similarity to SP:P17334; match to protein family HMM PF02378; match to protein family HMM TIGR00410; PTS system cellobiose-specific transporter subunit IIC complement(2733498..2734862) Listeria monocytogenes serotype 4b str. F2365 2798330 YP_015277.1 CDS LMOf2365_2689 NC_002973.6 2735303 2735458 D identified by similarity to OMNI:NTL01LI2838; hypothetical protein 2735303..2735458 Listeria monocytogenes serotype 4b str. F2365 2798331 YP_015278.1 CDS LMOf2365_2690 NC_002973.6 2735490 2736131 R identified by similarity to OMNI:NTL01LI2839; hypothetical protein complement(2735490..2736131) Listeria monocytogenes serotype 4b str. F2365 2799768 YP_015279.1 CDS LMOf2365_2691 NC_002973.6 2736674 2736769 R hypothetical protein complement(2736674..2736769) Listeria monocytogenes serotype 4b str. F2365 2799242 YP_015280.1 CDS LMOf2365_2692 NC_002973.6 2736828 2738342 R identified by match to protein family HMM PF00370; match to protein family HMM PF02782; gluconate kinase complement(2736828..2738342) Listeria monocytogenes serotype 4b str. F2365 2799243 YP_015281.1 CDS LMOf2365_2693 NC_002973.6 2738457 2739395 R hypothetical protein complement(2738457..2739395) Listeria monocytogenes serotype 4b str. F2365 2799226 YP_015282.1 CDS LMOf2365_2694 NC_002973.6 2739438 2740385 R identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein complement(2739438..2740385) Listeria monocytogenes serotype 4b str. F2365 2797014 YP_015283.1 CDS cydD NC_002973.6 2740528 2742267 R identified by similarity to SP:P94367; match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(2740528..2742267) Listeria monocytogenes serotype 4b str. F2365 2797015 YP_015284.1 CDS cydC NC_002973.6 2742267 2743991 R identified by similarity to SP:P94366; match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(2742267..2743991) Listeria monocytogenes serotype 4b str. F2365 2799526 YP_015285.1 CDS cydB NC_002973.6 2743991 2745004 R identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203; cytochrome d ubiquinol oxidase, subunit II complement(2743991..2745004) Listeria monocytogenes serotype 4b str. F2365 2799920 YP_015286.1 CDS cydA NC_002973.6 2744991 2746397 R identified by similarity to SP:P94364; match to protein family HMM PF01654; cytochrome d ubiquinol oxidase, subunit I complement(2744991..2746397) Listeria monocytogenes serotype 4b str. F2365 2799513 YP_015287.1 CDS LMOf2365_2699 NC_002973.6 2746779 2747249 R identified by match to protein family HMM PF00383; cytidine/deoxycytidylate deaminase complement(2746779..2747249) Listeria monocytogenes serotype 4b str. F2365 2799269 YP_015288.1 CDS acsA NC_002973.6 2747444 2749021 D identified by similarity to SP:P39062; match to protein family HMM PF00501; acetyl-coenzyme A synthetase 2747444..2749021 Listeria monocytogenes serotype 4b str. F2365 2798919 YP_015289.1 CDS LMOf2365_2701 NC_002973.6 2749153 2749785 R hypothetical protein complement(2749153..2749785) Listeria monocytogenes serotype 4b str. F2365 2798920 YP_015290.1 CDS LMOf2365_2702 NC_002973.6 2749802 2751088 R hypothetical protein complement(2749802..2751088) Listeria monocytogenes serotype 4b str. F2365 2798036 YP_015291.1 CDS LMOf2365_2703 NC_002973.6 2751088 2752053 R identified by similarity to GP:17064986; hypothetical protein complement(2751088..2752053) Listeria monocytogenes serotype 4b str. F2365 2797378 YP_015292.1 CDS LMOf2365_2704 NC_002973.6 2752956 2753186 D hypothetical protein 2752956..2753186 Listeria monocytogenes serotype 4b str. F2365 2797379 YP_015293.1 CDS LMOf2365_2705 NC_002973.6 2753260 2753559 R hypothetical protein complement(2753260..2753559) Listeria monocytogenes serotype 4b str. F2365 2799566 YP_015294.1 CDS LMOf2365_2706 NC_002973.6 2753646 2753801 R hypothetical protein complement(2753646..2753801) Listeria monocytogenes serotype 4b str. F2365 2799567 YP_015295.1 CDS LMOf2365_2707 NC_002973.6 2754033 2754806 R identified by similarity to OMNI:NTL01LI0397; hypothetical protein complement(2754033..2754806) Listeria monocytogenes serotype 4b str. F2365 2798054 YP_015296.1 CDS LMOf2365_2708 NC_002973.6 2754973 2755692 R identified by similarity to SP:O35000; match to protein family HMM PF01182; 6-phosphogluconolactonase complement(2754973..2755692) Listeria monocytogenes serotype 4b str. F2365 2797394 YP_015297.1 CDS LMOf2365_2709 NC_002973.6 2755772 2756506 D identified by similarity to SP:P39075; match to protein family HMM PF00376; multidrug efflux transporter transcriptional regulatory protein 2755772..2756506 Listeria monocytogenes serotype 4b str. F2365 2797395 YP_015298.1 CDS LMOf2365_2710 NC_002973.6 2756560 2757021 D identified by match to protein family HMM PF00583; acetyltransferase 2756560..2757021 Listeria monocytogenes serotype 4b str. F2365 2796994 YP_015299.1 CDS LMOf2365_2711 NC_002973.6 2757041 2757484 R identified by similarity to OMNI:NTL01LI2853; hypothetical protein complement(2757041..2757484) Listeria monocytogenes serotype 4b str. F2365 2797713 YP_015300.1 CDS LMOf2365_2712 NC_002973.6 2757542 2758894 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(2757542..2758894) Listeria monocytogenes serotype 4b str. F2365 2797714 YP_015301.1 CDS LMOf2365_2713 NC_002973.6 2758891 2759340 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(2758891..2759340) Listeria monocytogenes serotype 4b str. F2365 2797693 YP_015302.1 CDS LMOf2365_2714 NC_002973.6 2759510 2760391 D hypothetical protein 2759510..2760391 Listeria monocytogenes serotype 4b str. F2365 2797722 YP_015303.1 CDS LMOf2365_2715 NC_002973.6 2760476 2760931 D identified by match to protein family HMM PF00376; MerR family transcriptional regulator 2760476..2760931 Listeria monocytogenes serotype 4b str. F2365 2797723 YP_015304.1 CDS LMOf2365_2716 NC_002973.6 2760931 2761335 D hypothetical protein 2760931..2761335 Listeria monocytogenes serotype 4b str. F2365 2797122 YP_015305.1 CDS LMOf2365_2717 NC_002973.6 2761378 2761989 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; HAD family hydrolase complement(2761378..2761989) Listeria monocytogenes serotype 4b str. F2365 2799677 YP_015306.1 CDS LMOf2365_2718 NC_002973.6 2762003 2762371 R identified by similarity to OMNI:NTL01LI2860; hypothetical protein complement(2762003..2762371) Listeria monocytogenes serotype 4b str. F2365 2799678 YP_015307.1 CDS LMOf2365_2719 NC_002973.6 2762454 2763206 R phosphosugar-binding protein complement(2762454..2763206) Listeria monocytogenes serotype 4b str. F2365 2797576 YP_015308.1 CDS LMOf2365_2720 NC_002973.6 2763372 2765330 D identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427; PTS system fructose-specific transporter subunit IIABC 2763372..2765330 Listeria monocytogenes serotype 4b str. F2365 2797589 YP_015309.1 CDS LMOf2365_2721 NC_002973.6 2765391 2768039 D identified by match to protein family HMM PF01074; glycosyl hydrolase 2765391..2768039 Listeria monocytogenes serotype 4b str. F2365 2797590 YP_015310.1 CDS LMOf2365_2722 NC_002973.6 2768041 2769723 D identified by similarity to SP:P76041; match to protein family HMM PF00128; sucrose phosphorylase 2768041..2769723 Listeria monocytogenes serotype 4b str. F2365 2797105 YP_015311.1 CDS garK-1 NC_002973.6 2769720 2770853 D identified by similarity to SP:P23524; match to protein family HMM PF02595; match to protein family HMM TIGR00045; glycerate kinase 2769720..2770853 Listeria monocytogenes serotype 4b str. F2365 2797083 YP_015312.1 CDS LMOf2365_2724 NC_002973.6 2770858 2771814 R identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator complement(2770858..2771814) Listeria monocytogenes serotype 4b str. F2365 2797172 YP_015313.1 CDS LMOf2365_2725 NC_002973.6 2771882 2773216 R identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; hypothetical protein complement(2771882..2773216) Listeria monocytogenes serotype 4b str. F2365 2797216 YP_015314.1 CDS LMOf2365_2726 NC_002973.6 2773334 2774023 R Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase complement(2773334..2774023) Listeria monocytogenes serotype 4b str. F2365 2797217 YP_015315.1 CDS LMOf2365_2727 NC_002973.6 2774016 2774306 R identified by similarity to GP:1770137; hypothetical protein complement(2774016..2774306) Listeria monocytogenes serotype 4b str. F2365 2797430 YP_015316.1 CDS LMOf2365_2728 NC_002973.6 2774296 2775504 R identified by match to protein family HMM PF00083; major facilitator family transporter complement(2774296..2775504) Listeria monocytogenes serotype 4b str. F2365 2797431 YP_015317.1 CDS LMOf2365_2729 NC_002973.6 2775621 2775968 R identified by match to protein family HMM PF00018; SH3 domain-containing protein complement(2775621..2775968) Listeria monocytogenes serotype 4b str. F2365 2797462 YP_015318.1 CDS LMOf2365_2730 NC_002973.6 2775987 2776631 R similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase complement(2775987..2776631) Listeria monocytogenes serotype 4b str. F2365 2797463 YP_015319.1 CDS LMOf2365_2731 NC_002973.6 2776772 2777461 R identified by similarity to OMNI:NTL01LI2868; match to protein family HMM PF00027; cyclic nucleotide-binding protein complement(2776772..2777461) Listeria monocytogenes serotype 4b str. F2365 2799731 YP_015320.1 CDS LMOf2365_2732 NC_002973.6 2777791 2779518 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 2777791..2779518 Listeria monocytogenes serotype 4b str. F2365 2799737 YP_015321.1 CDS LMOf2365_2733 NC_002973.6 2779572 2779823 R identified by similarity to OMNI:NTL01LM2735; match to protein family HMM PF04994; hypothetical protein complement(2779572..2779823) Listeria monocytogenes serotype 4b str. F2365 2799738 YP_015322.1 CDS serS NC_002973.6 2779843 2781126 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(2779843..2781126) Listeria monocytogenes serotype 4b str. F2365 2799728 YP_015323.1 CDS LMOf2365_2735 NC_002973.6 2781460 2781879 R identified by similarity to SP:P80238; general stress protein 26 complement(2781460..2781879) Listeria monocytogenes serotype 4b str. F2365 2797921 YP_015324.1 CDS LMOf2365_2736 NC_002973.6 2782009 2782581 D identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566; glutamine amidotransferase 2782009..2782581 Listeria monocytogenes serotype 4b str. F2365 2797922 YP_015325.1 CDS pabB NC_002973.6 2782578 2784284 D identified by match to protein family HMM PF00425; match to protein family HMM TIGR00553; para-aminobenzoate synthase, component I 2782578..2784284 Listeria monocytogenes serotype 4b str. F2365 2797926 YP_015326.1 CDS LMOf2365_2738 NC_002973.6 2784446 2786167 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 2784446..2786167 Listeria monocytogenes serotype 4b str. F2365 2797927 YP_015327.1 CDS LMOf2365_2739 NC_002973.6 2786167 2787939 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 2786167..2787939 Listeria monocytogenes serotype 4b str. F2365 2797928 YP_015328.1 CDS LMOf2365_2740 NC_002973.6 2788119 2789972 D hypothetical protein 2788119..2789972 Listeria monocytogenes serotype 4b str. F2365 2797739 YP_015329.1 CDS LMOf2365_2741 NC_002973.6 2789983 2790930 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 2789983..2790930 Listeria monocytogenes serotype 4b str. F2365 2797772 YP_015330.1 CDS LMOf2365_2742 NC_002973.6 2791011 2792348 R identified by similarity to SP:P08750; match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase complement(2791011..2792348) Listeria monocytogenes serotype 4b str. F2365 2797773 YP_015331.1 CDS LMOf2365_2743 NC_002973.6 2792527 2794194 R identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976; CocE/NonD family hydrolase complement(2792527..2794194) Listeria monocytogenes serotype 4b str. F2365 2797799 YP_015332.1 CDS topB NC_002973.6 2794303 2796456 R decatenates replicating daughter chromosomes; DNA topoisomerase III complement(2794303..2796456) Listeria monocytogenes serotype 4b str. F2365 2797830 YP_015333.1 CDS recQ NC_002973.6 2796480 2798252 R identified by similarity to SP:P15043; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389; ATP-dependent DNA helicase RecQ complement(2796480..2798252) Listeria monocytogenes serotype 4b str. F2365 2797731 YP_015334.1 CDS guaB NC_002973.6 2798413 2799879 R identified by match to protein family HMM PF00478; match to protein family HMM PF00571; match to protein family HMM TIGR01302; inosine-5'-monophosphate dehydrogenase complement(2798413..2799879) Listeria monocytogenes serotype 4b str. F2365 2797732 YP_015335.1 CDS LMOf2365_2747 NC_002973.6 2800064 2800156 D hypothetical protein 2800064..2800156 Listeria monocytogenes serotype 4b str. F2365 2797733 YP_015336.1 CDS LMOf2365_2748 NC_002973.6 2800167 2800697 R identified by match to protein family HMM PF01661; hypothetical protein complement(2800167..2800697) Listeria monocytogenes serotype 4b str. F2365 2797795 YP_015337.1 CDS LMOf2365_2749 NC_002973.6 2800755 2802365 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2800755..2802365) Listeria monocytogenes serotype 4b str. F2365 2797796 YP_015338.1 CDS LMOf2365_2750 NC_002973.6 2802721 2802855 D hypothetical protein 2802721..2802855 Listeria monocytogenes serotype 4b str. F2365 2797786 YP_015339.1 CDS LMOf2365_2751 NC_002973.6 2802883 2804337 D identified by match to protein family HMM PF00232; glycosyl hydrolase 2802883..2804337 Listeria monocytogenes serotype 4b str. F2365 2797787 YP_015340.1 CDS LMOf2365_2752 NC_002973.6 2804381 2804683 D identified by similarity to SP:P17409; match to protein family HMM PF02302; PTS system cellobiose-specific transporter subunit IIB 2804381..2804683 Listeria monocytogenes serotype 4b str. F2365 2797680 YP_015341.1 CDS LMOf2365_2753 NC_002973.6 2804716 2806068 D identified by similarity to SP:P17334; match to protein family HMM PF02378; match to protein family HMM TIGR00410; PTS system cellobiose-specific transporter subunit IIC 2804716..2806068 Listeria monocytogenes serotype 4b str. F2365 2797666 YP_015342.1 CDS LMOf2365_2754 NC_002973.6 2806080 2806964 D identified by match to protein family HMM PF00480; ROK family protein 2806080..2806964 Listeria monocytogenes serotype 4b str. F2365 2797667 YP_015343.1 CDS LMOf2365_2755 NC_002973.6 2806957 2807265 D identified by similarity to SP:P46319; match to protein family HMM PF02255; PTS system transporter subunit IIA 2806957..2807265 Listeria monocytogenes serotype 4b str. F2365 2797646 YP_015344.1 CDS LMOf2365_2756 NC_002973.6 2807305 2808039 R identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family phosphosugar-binding transcriptional regulator complement(2807305..2808039) Listeria monocytogenes serotype 4b str. F2365 2797695 YP_015345.1 CDS LMOf2365_2757 NC_002973.6 2808140 2808802 R identified by similarity to OMNI:NTL01LI2890; hypothetical protein complement(2808140..2808802) Listeria monocytogenes serotype 4b str. F2365 2797696 YP_015346.1 CDS LMOf2365_2758 NC_002973.6 2808873 2810003 R hypothetical protein complement(2808873..2810003) Listeria monocytogenes serotype 4b str. F2365 2797704 YP_015347.1 CDS LMOf2365_2759 NC_002973.6 2810030 2810917 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2810030..2810917) Listeria monocytogenes serotype 4b str. F2365 2797637 YP_015348.1 CDS LMOf2365_2760 NC_002973.6 2811087 2813417 D Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; bifunctional glutamate--cysteine ligase/glutathione synthetase 2811087..2813417 Listeria monocytogenes serotype 4b str. F2365 2797638 YP_015349.1 CDS bglA NC_002973.6 2813457 2814905 R identified by similarity to SP:Q46829; match to protein family HMM PF00232; 6-phospho-beta-glucosidase complement(2813457..2814905) Listeria monocytogenes serotype 4b str. F2365 2797862 YP_015350.1 CDS LMOf2365_2762 NC_002973.6 2814898 2816751 R identified by similarity to SP:P40739; match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830; PTS system beta-glucoside-specific transporter subunit IIABC complement(2814898..2816751) Listeria monocytogenes serotype 4b str. F2365 2797871 YP_015351.1 CDS LMOf2365_2763 NC_002973.6 2816851 2817696 R identified by similarity to SP:P39805; match to protein family HMM PF00874; match to protein family HMM PF03123; BigG family transcription antiterminator complement(2816851..2817696) Listeria monocytogenes serotype 4b str. F2365 2797872 YP_015352.1 CDS LMOf2365_2764 NC_002973.6 2817852 2818055 R hypothetical protein complement(2817852..2818055) Listeria monocytogenes serotype 4b str. F2365 2797879 YP_015353.1 CDS LMOf2365_2765 NC_002973.6 2818052 2818675 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2818052..2818675) Listeria monocytogenes serotype 4b str. F2365 2797886 YP_015354.1 CDS LMOf2365_2766 NC_002973.6 2818668 2820836 R identified by match to protein family HMM TIGR01654; bacteriocin immunity protein complement(2818668..2820836) Listeria monocytogenes serotype 4b str. F2365 2797887 YP_015355.1 CDS LMOf2365_2767 NC_002973.6 2820899 2821294 R identified by similarity to GP:3355782; match to protein family HMM TIGR01653; bacteriocin complement(2820899..2821294) Listeria monocytogenes serotype 4b str. F2365 2797897 YP_015356.1 CDS LMOf2365_2768 NC_002973.6 2821895 2823085 D identified by match to protein family HMM PF00083; match to protein family HMM TIGR00710; Bcr/CflA subfamily drug resistance transporter 2821895..2823085 Listeria monocytogenes serotype 4b str. F2365 2797906 YP_015357.1 CDS LMOf2365_2769 NC_002973.6 2823218 2823727 R identified by similarity to OMNI:NTL01LI2897; hypothetical protein complement(2823218..2823727) Listeria monocytogenes serotype 4b str. F2365 2797907 YP_015358.1 CDS ychF NC_002973.6 2824049 2825149 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(2824049..2825149) Listeria monocytogenes serotype 4b str. F2365 2798301 YP_015359.1 CDS LMOf2365_2771 NC_002973.6 2825300 2825608 R identified by similarity to SP:P46319; match to protein family HMM PF02255; PTS system beta-glucoside-specific transporter subunit IIA complement(2825300..2825608) Listeria monocytogenes serotype 4b str. F2365 2799823 YP_015360.1 CDS bglX-2 NC_002973.6 2825614 2827884 R identified by similarity to SP:P33363; match to protein family HMM PF00933; match to protein family HMM PF01915; beta-glucosidase complement(2825614..2827884) Listeria monocytogenes serotype 4b str. F2365 2799824 YP_015361.1 CDS LMOf2365_2773 NC_002973.6 2827919 2828218 R identified by similarity to SP:P46318; match to protein family HMM PF02302; PTS system beta-glucoside-specific transporter subunit IIB complement(2827919..2828218) Listeria monocytogenes serotype 4b str. F2365 2798303 YP_015362.1 CDS LMOf2365_2774 NC_002973.6 2828233 2829528 R PTS system beta-glucoside-specific transporter subunit IIC complement(2828233..2829528) Listeria monocytogenes serotype 4b str. F2365 2798304 YP_015363.1 CDS LMOf2365_2775 NC_002973.6 2829678 2831594 R identified by match to protein family HMM PF00359; match to protein family HMM PF00874; PRD domain-containing protein complement(2829678..2831594) Listeria monocytogenes serotype 4b str. F2365 2798305 YP_015364.1 CDS kaT NC_002973.6 2831805 2833271 R identified by similarity to SP:P24168; match to protein family HMM PF00199; catalase complement(2831805..2833271) Listeria monocytogenes serotype 4b str. F2365 2798596 YP_015365.1 CDS LMOf2365_2777 NC_002973.6 2833420 2833626 R identified by similarity to OMNI:NTL01LI2901; match to protein family HMM PF06107; hypothetical protein complement(2833420..2833626) Listeria monocytogenes serotype 4b str. F2365 2798455 YP_015366.1 CDS LMOf2365_2778 NC_002973.6 2833630 2834481 R identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; ParB family chromosome partioning protein complement(2833630..2834481) Listeria monocytogenes serotype 4b str. F2365 2798456 YP_015367.1 CDS soj NC_002973.6 2834474 2835235 R identified by similarity to SP:P37522; match to protein family HMM PF00991; sporulation initiation inhibitor protein SOJ complement(2834474..2835235) Listeria monocytogenes serotype 4b str. F2365 2798610 YP_015368.1 CDS LMOf2365_2780 NC_002973.6 2835459 2836217 R identified by match to protein family HMM PF01381; DNA-binding protein complement(2835459..2836217) Listeria monocytogenes serotype 4b str. F2365 2798313 YP_015369.1 CDS LMOf2365_2781 NC_002973.6 2836376 2836675 R lipoprotein complement(2836376..2836675) Listeria monocytogenes serotype 4b str. F2365 2798314 YP_015370.1 CDS LMOf2365_2782 NC_002973.6 2836687 2837541 R identified by similarity to SP:P26497; match to protein family HMM PF02195; match to protein family HMM TIGR00180; ParB family chromosome partioning protein complement(2836687..2837541) Listeria monocytogenes serotype 4b str. F2365 2799863 YP_015371.1 CDS LMOf2365_2783 NC_002973.6 2837713 2838519 R identified by similarity to OMNI:NTL01LI2907; match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family phosphosugar-binding transcriptional regulator complement(2837713..2838519) Listeria monocytogenes serotype 4b str. F2365 2799168 YP_015372.1 CDS LMOf2365_2784 NC_002973.6 2838503 2839408 R identified by match to protein family HMM PF00480; ROK family protein complement(2838503..2839408) Listeria monocytogenes serotype 4b str. F2365 2799169 YP_015373.1 CDS LMOf2365_2785 NC_002973.6 2839433 2839879 R identified by similarity to SP:P32058; match to protein family HMM PF00359; PTS system transporter subunit IIA complement(2839433..2839879) Listeria monocytogenes serotype 4b str. F2365 2799524 YP_015374.1 CDS LMOf2365_2786 NC_002973.6 2839892 2840548 R identified by similarity to GP:16414878; match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD superfamily hydrolase complement(2839892..2840548) Listeria monocytogenes serotype 4b str. F2365 2799579 YP_015375.1 CDS mtlA NC_002973.6 2840611 2842017 R identified by similarity to SP:P50852; match to protein family HMM PF02302; match to protein family HMM PF02378; PTS system mannitol-specific transporter subunit IIBC complement(2840611..2842017) Listeria monocytogenes serotype 4b str. F2365 2799580 YP_015376.1 CDS LMOf2365_2788 NC_002973.6 2842051 2843052 R identified by similarity to OMNI:SA0196; match to protein family HMM PF01408; match to protein family HMM PF02894; Gfo/Idh/MocA family oxidoreductase complement(2842051..2843052) Listeria monocytogenes serotype 4b str. F2365 2799598 YP_015377.1 CDS LMOf2365_2789 NC_002973.6 2843072 2843752 R Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase complement(2843072..2843752) Listeria monocytogenes serotype 4b str. F2365 2799589 YP_015378.1 CDS gidB NC_002973.6 2843969 2844685 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(2843969..2844685) Listeria monocytogenes serotype 4b str. F2365 2799590 YP_015379.1 CDS LMOf2365_2791 NC_002973.6 2844747 2844863 R hypothetical protein complement(2844747..2844863) Listeria monocytogenes serotype 4b str. F2365 2799604 YP_015380.1 CDS LMOf2365_2792 NC_002973.6 2844838 2845104 R hypothetical protein complement(2844838..2845104) Listeria monocytogenes serotype 4b str. F2365 2796988 YP_015381.1 CDS LMOf2365_2793 NC_002973.6 2845106 2845471 R identified by similarity to OMNI:NTL01LI2915; hypothetical protein complement(2845106..2845471) Listeria monocytogenes serotype 4b str. F2365 2796989 YP_015382.1 CDS LMOf2365_2794 NC_002973.6 2845464 2846744 R identified by similarity to OMNI:NTL01LI2916; hypothetical protein complement(2845464..2846744) Listeria monocytogenes serotype 4b str. F2365 2797057 YP_015383.1 CDS LMOf2365_2795 NC_002973.6 2846750 2847136 R identified by similarity to GP:16415478; hypothetical protein complement(2846750..2847136) Listeria monocytogenes serotype 4b str. F2365 2798978 YP_015384.1 CDS LMOf2365_2796 NC_002973.6 2847264 2847650 R identified by similarity to GP:16415479; hypothetical protein complement(2847264..2847650) Listeria monocytogenes serotype 4b str. F2365 2798979 YP_015385.1 CDS LMOf2365_2797 NC_002973.6 2847778 2848155 R identified by similarity to GP:16415480; hypothetical protein complement(2847778..2848155) Listeria monocytogenes serotype 4b str. F2365 2797967 YP_015386.1 CDS LMOf2365_2798 NC_002973.6 2848585 2849565 R hypothetical protein complement(2848585..2849565) Listeria monocytogenes serotype 4b str. F2365 2798944 YP_015387.1 CDS LMOf2365_2799 NC_002973.6 2851210 2852040 D identified by match to protein family HMM PF01381; DNA-binding protein 2851210..2852040 Listeria monocytogenes serotype 4b str. F2365 2798945 YP_015388.1 CDS gidA NC_002973.6 2853048 2854946 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(2853048..2854946) Listeria monocytogenes serotype 4b str. F2365 2798073 YP_015389.1 CDS trmE NC_002973.6 2854971 2856344 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(2854971..2856344) Listeria monocytogenes serotype 4b str. F2365 2798075 YP_015390.1 CDS LMOf2365_2803 NC_002973.6 2856702 2857520 D identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase 2856702..2857520 Listeria monocytogenes serotype 4b str. F2365 2798898 YP_015391.1 CDS LMOf2365_2804 NC_002973.6 2857576 2858283 R identified by similarity to OMNI:NTL01LI2926; hypothetical protein complement(2857576..2858283) Listeria monocytogenes serotype 4b str. F2365 2797416 YP_015392.1 CDS LMOf2365_2805 NC_002973.6 2858307 2858834 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2858307..2858834) Listeria monocytogenes serotype 4b str. F2365 2797417 YP_015393.1 CDS fabG NC_002973.6 2858995 2859726 D catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2858995..2859726 Listeria monocytogenes serotype 4b str. F2365 2799076 YP_015394.1 CDS LMOf2365_2807 NC_002973.6 2859773 2860966 R major facilitator family transporter complement(2859773..2860966) Listeria monocytogenes serotype 4b str. F2365 2799189 YP_015395.1 CDS LMOf2365_2808 NC_002973.6 2861054 2862247 R identified by similarity to SP:P80092; match to protein family HMM PF01546; match to protein family HMM TIGR01891; carboxypeptidase complement(2861054..2862247) Listeria monocytogenes serotype 4b str. F2365 2799190 YP_015396.1 CDS LMOf2365_2809 NC_002973.6 2862263 2863663 R identified by match to protein family HMM PF00083; major facilitator family transporter complement(2862263..2863663) Listeria monocytogenes serotype 4b str. F2365 2798833 YP_015397.1 CDS LMOf2365_2810 NC_002973.6 2863663 2864850 R identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891; M20/M25/M40 family peptidase complement(2863663..2864850) Listeria monocytogenes serotype 4b str. F2365 2798831 YP_015398.1 CDS LMOf2365_2811 NC_002973.6 2865059 2867401 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(2865059..2867401) Listeria monocytogenes serotype 4b str. F2365 2798832 YP_015399.1 CDS LMOf2365_2812 NC_002973.6 2867614 2870364 D identified by match to protein family HMM PF00560; match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 2867614..2870364 Listeria monocytogenes serotype 4b str. F2365 2798152 YP_015400.1 CDS LMOf2365_2813 NC_002973.6 2870409 2870732 R identified by similarity to OMNI:NTL01LI2934; hypothetical protein complement(2870409..2870732) Listeria monocytogenes serotype 4b str. F2365 2798153 YP_015401.1 CDS LMOf2365_2814 NC_002973.6 2870740 2871981 R identified by similarity to GP:18143712; match to protein family HMM PF06245; hypothetical protein complement(2870740..2871981) Listeria monocytogenes serotype 4b str. F2365 2797278 YP_015402.1 CDS LMOf2365_2815 NC_002973.6 2872070 2873281 R identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase complement(2872070..2873281) Listeria monocytogenes serotype 4b str. F2365 2797048 YP_015403.1 CDS serC NC_002973.6 2873250 2874341 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(2873250..2874341) Listeria monocytogenes serotype 4b str. F2365 2797049 YP_015404.1 CDS LMOf2365_2817 NC_002973.6 2874712 2875860 R identified by match to protein family HMM PF00083; major facilitator family transporter complement(2874712..2875860) Listeria monocytogenes serotype 4b str. F2365 2799698 YP_015405.1 CDS LMOf2365_2818 NC_002973.6 2875874 2876296 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(2875874..2876296) Listeria monocytogenes serotype 4b str. F2365 2799701 YP_015406.1 CDS LMOf2365_2819 NC_002973.6 2876399 2876752 R identified by similarity to OMNI:NTL01LI2940; hypothetical protein complement(2876399..2876752) Listeria monocytogenes serotype 4b str. F2365 2799702 YP_015407.1 CDS LMOf2365_2820 NC_002973.6 2876946 2877545 D identified by similarity to OMNI:NTL01LI2941; match to protein family HMM PF00881; hypothetical protein 2876946..2877545 Listeria monocytogenes serotype 4b str. F2365 2797952 YP_015408.1 CDS trx-2 NC_002973.6 2877603 2877923 R identified by match to protein family HMM PF00085; thioredoxin complement(2877603..2877923) Listeria monocytogenes serotype 4b str. F2365 2797746 YP_015409.1 CDS LMOf2365_2822 NC_002973.6 2878046 2878708 R identified by similarity to SP:P71447; match to protein family HMM PF00702; match to protein family HMM TIGR01509; beta-phosphoglucomutase complement(2878046..2878708) Listeria monocytogenes serotype 4b str. F2365 2797747 YP_015410.1 CDS garK-2 NC_002973.6 2878705 2879826 R identified by similarity to SP:P23524; match to protein family HMM PF02595; match to protein family HMM TIGR00045; glycerate kinase complement(2878705..2879826) Listeria monocytogenes serotype 4b str. F2365 2797669 YP_015411.1 CDS LMOf2365_2824 NC_002973.6 2879823 2882000 R identified by match to protein family HMM PF03632; match to protein family HMM PF03633; match to protein family HMM PF03636; glycosyl transferase family protein complement(2879823..2882000) Listeria monocytogenes serotype 4b str. F2365 2797670 YP_015412.1 CDS LMOf2365_2825 NC_002973.6 2881997 2883028 R identified by match to protein family HMM PF01408; match to protein family HMM PF02894; Gfo/Idh/MocA family oxidoreductase complement(2881997..2883028) Listeria monocytogenes serotype 4b str. F2365 2798229 YP_015413.1 CDS ycjR NC_002973.6 2883085 2883879 R identified by similarity to SP:P76044; match to protein family HMM PF01261; YcjR protein complement(2883085..2883879) Listeria monocytogenes serotype 4b str. F2365 2798822 YP_015414.1 CDS LMOf2365_2827 NC_002973.6 2883892 2884944 R identified by match to protein family HMM PF00107; zinc-dependent alcohol dehydrogenase complement(2883892..2884944) Listeria monocytogenes serotype 4b str. F2365 2798823 YP_015415.1 CDS LMOf2365_2828 NC_002973.6 2884963 2885814 R identified by similarity to SP:P77716; match to protein family HMM PF00528; ABC transporter permease complement(2884963..2885814) Listeria monocytogenes serotype 4b str. F2365 2798825 YP_015416.1 CDS LMOf2365_2829 NC_002973.6 2885801 2886682 R identified by similarity to SP:P77653; match to protein family HMM PF00528; ABC transporter permease complement(2885801..2886682) Listeria monocytogenes serotype 4b str. F2365 2798826 YP_015417.1 CDS LMOf2365_2830 NC_002973.6 2886758 2888050 R identified by match to protein family HMM PF01547; ABC transporter substrate-binding protein complement(2886758..2888050) Listeria monocytogenes serotype 4b str. F2365 2798827 YP_015418.1 CDS LMOf2365_2831 NC_002973.6 2888047 2889747 R identified by similarity to SP:P76041; match to protein family HMM PF00128; sucrose phosphorylase complement(2888047..2889747) Listeria monocytogenes serotype 4b str. F2365 2798828 YP_015419.1 CDS LMOf2365_2832 NC_002973.6 2889974 2890999 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 2889974..2890999 Listeria monocytogenes serotype 4b str. F2365 2798829 YP_015420.1 CDS LMOf2365_2833 NC_002973.6 2891136 2893130 R identified by similarity to OMNI:NTL01LI2954; hypothetical protein complement(2891136..2893130) Listeria monocytogenes serotype 4b str. F2365 2798386 YP_015421.1 CDS LMOf2365_2834 NC_002973.6 2893263 2893787 R identified by match to protein family HMM PF00583; acetyltransferase complement(2893263..2893787) Listeria monocytogenes serotype 4b str. F2365 2798495 YP_015422.1 CDS LMOf2365_2835 NC_002973.6 2893962 2895374 D identified by match to protein family HMM PF00083; major facilitator family transporter 2893962..2895374 Listeria monocytogenes serotype 4b str. F2365 2798575 YP_015423.1 CDS LMOf2365_2836 NC_002973.6 2895415 2895729 R identified by similarity to OMNI:NTL01LI2957; hypothetical protein complement(2895415..2895729) Listeria monocytogenes serotype 4b str. F2365 2798576 YP_015424.1 CDS rhaD NC_002973.6 2895742 2896563 R identified by similarity to SP:P32169; match to protein family HMM PF00596; rhamnulose-1-phosphate aldolase complement(2895742..2896563) Listeria monocytogenes serotype 4b str. F2365 2799052 YP_015425.1 CDS rhaA NC_002973.6 2896576 2897838 R catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase complement(2896576..2897838) Listeria monocytogenes serotype 4b str. F2365 2799053 YP_015426.1 CDS rhaB NC_002973.6 2897851 2899302 R identified by similarity to SP:P32171; match to protein family HMM PF00370; rhamnulokinase complement(2897851..2899302) Listeria monocytogenes serotype 4b str. F2365 2797011 YP_015427.1 CDS LMOf2365_2840 NC_002973.6 2899321 2900589 R identified by similarity to SP:P42417; match to protein family HMM PF00083; sugar transporter complement(2899321..2900589) Listeria monocytogenes serotype 4b str. F2365 2798240 YP_015428.1 CDS LMOf2365_2841 NC_002973.6 2900712 2901692 D identified by match to protein family HMM PF00165; match to protein family HMM PF02311; AraC family transcriptional regulator 2900712..2901692 Listeria monocytogenes serotype 4b str. F2365 2798241 YP_015429.1 CDS LMOf2365_2842 NC_002973.6 2901742 2902203 R identified by similarity to OMNI:NTL01LI2963; match to protein family HMM PF06171; hypothetical protein complement(2901742..2902203) Listeria monocytogenes serotype 4b str. F2365 2798956 YP_015430.1 CDS LMOf2365_2843 NC_002973.6 2902258 2902878 R identified by match to protein family HMM PF00013; match to protein family HMM PF01424; RNA-binding protein complement(2902258..2902878) Listeria monocytogenes serotype 4b str. F2365 2798103 YP_015431.1 CDS LMOf2365_2844 NC_002973.6 2902875 2903738 R identified by similarity to SP:Q01625; match to protein family HMM PF02096; SpoJ protein complement(2902875..2903738) Listeria monocytogenes serotype 4b str. F2365 2798104 YP_015432.1 CDS rnpA NC_002973.6 2903779 2904138 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(2903779..2904138) Listeria monocytogenes serotype 4b str. F2365 2798883 YP_015433.1 CDS rpmH NC_002973.6 2904228 2904362 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(2904228..2904362) Listeria monocytogenes serotype 4b str. F2365 2799622 YP_015434.1 CDS LMOf2365_2847 NC_002973.6 2904530 2905000 R identified by similarity to GP:2695687; hypothetical protein complement(2904530..2905000) Listeria monocytogenes serotype 4b str. F2365 2799623 LMOf2365_tRNA-Lys-1 tRNA LMOf2365_tRNA-Lys-1 NC_002973.6 92983 93055 D tRNA-Lys 92983..93055 Listeria monocytogenes serotype 4b str. F2365 2798474 LMOf2365_tRNA-Val-1 tRNA LMOf2365_tRNA-Val-1 NC_002973.6 247662 247734 D tRNA-Val 247662..247734 Listeria monocytogenes serotype 4b str. F2365 2797313 LMOf2365_tRNA-Thr-1 tRNA LMOf2365_tRNA-Thr-1 NC_002973.6 247743 247818 D tRNA-Thr 247743..247818 Listeria monocytogenes serotype 4b str. F2365 2797292 LMOf2365_tRNA-Lys-2 tRNA LMOf2365_tRNA-Lys-2 NC_002973.6 247859 247931 D tRNA-Lys 247859..247931 Listeria monocytogenes serotype 4b str. F2365 2798146 LMOf2365_tRNA-Leu-1 tRNA LMOf2365_tRNA-Leu-1 NC_002973.6 247937 248018 D tRNA-Leu 247937..248018 Listeria monocytogenes serotype 4b str. F2365 2797271 LMOf2365_tRNA-Gly-1 tRNA LMOf2365_tRNA-Gly-1 NC_002973.6 248033 248104 D tRNA-Gly 248033..248104 Listeria monocytogenes serotype 4b str. F2365 2797308 LMOf2365_tRNA-Leu-2 tRNA LMOf2365_tRNA-Leu-2 NC_002973.6 248126 248211 D tRNA-Leu 248126..248211 Listeria monocytogenes serotype 4b str. F2365 2797318 LMOf2365_tRNA-Arg-1 tRNA LMOf2365_tRNA-Arg-1 NC_002973.6 248224 248297 D tRNA-Arg 248224..248297 Listeria monocytogenes serotype 4b str. F2365 2797320 LMOf2365_tRNA-Pro-1 tRNA LMOf2365_tRNA-Pro-1 NC_002973.6 248308 248381 D tRNA-Pro 248308..248381 Listeria monocytogenes serotype 4b str. F2365 2797310 LMOf2365_tRNA-Ala-1 tRNA LMOf2365_tRNA-Ala-1 NC_002973.6 248400 248475 D tRNA-Ala 248400..248475 Listeria monocytogenes serotype 4b str. F2365 2798380 LMOf2365_tRNA-Ser-1 tRNA LMOf2365_tRNA-Ser-1 NC_002973.6 684053 684142 R tRNA-Ser complement(684053..684142) Listeria monocytogenes serotype 4b str. F2365 2799057 LMOf2365_tRNA-Asn-1 tRNA LMOf2365_tRNA-Asn-1 NC_002973.6 936580 936652 D tRNA-Asn 936580..936652 Listeria monocytogenes serotype 4b str. F2365 2798255 LMOf2365_tRNA-Ser-2 tRNA LMOf2365_tRNA-Ser-2 NC_002973.6 936656 936743 D tRNA-Ser 936656..936743 Listeria monocytogenes serotype 4b str. F2365 2796990 LMOf2365_tRNA-Glu-1 tRNA LMOf2365_tRNA-Glu-1 NC_002973.6 940708 940779 D tRNA-Glu 940708..940779 Listeria monocytogenes serotype 4b str. F2365 2797269 LMOf2365_tRNA-Asp-1 tRNA LMOf2365_tRNA-Asp-1 NC_002973.6 940806 940878 D tRNA-Asp 940806..940878 Listeria monocytogenes serotype 4b str. F2365 2799690 LMOf2365_tRNA-Gly-2 tRNA LMOf2365_tRNA-Gly-2 NC_002973.6 972489 972559 D tRNA-Gly 972489..972559 Listeria monocytogenes serotype 4b str. F2365 2798534 LMOf2365_tRNA-Arg-2 tRNA LMOf2365_tRNA-Arg-2 NC_002973.6 1243784 1243857 D tRNA-Arg 1243784..1243857 Listeria monocytogenes serotype 4b str. F2365 2798306 LMOf2365_tRNA-Glu-2 tRNA LMOf2365_tRNA-Glu-2 NC_002973.6 1721829 1721900 R tRNA-Glu complement(1721829..1721900) Listeria monocytogenes serotype 4b str. F2365 2799675 LMOf2365_tRNA-Ser-3 tRNA LMOf2365_tRNA-Ser-3 NC_002973.6 1721906 1721996 R tRNA-Ser complement(1721906..1721996) Listeria monocytogenes serotype 4b str. F2365 2798308 LMOf2365_tRNA-Asn-2 tRNA LMOf2365_tRNA-Asn-2 NC_002973.6 1722031 1722103 R tRNA-Asn complement(1722031..1722103) Listeria monocytogenes serotype 4b str. F2365 2798226 LMOf2365_tRNA-Ile-1 tRNA LMOf2365_tRNA-Ile-1 NC_002973.6 1722110 1722183 R tRNA-Ile complement(1722110..1722183) Listeria monocytogenes serotype 4b str. F2365 2798310 LMOf2365_tRNA-Gly-3 tRNA LMOf2365_tRNA-Gly-3 NC_002973.6 1722209 1722279 R tRNA-Gly complement(1722209..1722279) Listeria monocytogenes serotype 4b str. F2365 2799785 LMOf2365_tRNA-His-1 tRNA LMOf2365_tRNA-His-1 NC_002973.6 1722304 1722376 R tRNA-His complement(1722304..1722376) Listeria monocytogenes serotype 4b str. F2365 2799605 LMOf2365_tRNA-Phe-1 tRNA LMOf2365_tRNA-Phe-1 NC_002973.6 1722405 1722477 R tRNA-Phe complement(1722405..1722477) Listeria monocytogenes serotype 4b str. F2365 2799088 LMOf2365_tRNA-Asp-2 tRNA LMOf2365_tRNA-Asp-2 NC_002973.6 1722482 1722557 R tRNA-Asp complement(1722482..1722557) Listeria monocytogenes serotype 4b str. F2365 2798328 LMOf2365_tRNA-Met-1 tRNA LMOf2365_tRNA-Met-1 NC_002973.6 1722562 1722635 R tRNA-Met complement(1722562..1722635) Listeria monocytogenes serotype 4b str. F2365 2799757 LMOf2365_tRNA-Ser-4 tRNA LMOf2365_tRNA-Ser-4 NC_002973.6 1722678 1722767 R tRNA-Ser complement(1722678..1722767) Listeria monocytogenes serotype 4b str. F2365 2799697 LMOf2365_tRNA-Met-2 tRNA LMOf2365_tRNA-Met-2 NC_002973.6 1722790 1722863 R tRNA-Met complement(1722790..1722863) Listeria monocytogenes serotype 4b str. F2365 2799855 LMOf2365_tRNA-Met-3 tRNA LMOf2365_tRNA-Met-3 NC_002973.6 1722875 1722948 R tRNA-Met complement(1722875..1722948) Listeria monocytogenes serotype 4b str. F2365 2798749 LMOf2365_tRNA-Ala-2 tRNA LMOf2365_tRNA-Ala-2 NC_002973.6 1722991 1723063 R tRNA-Ala complement(1722991..1723063) Listeria monocytogenes serotype 4b str. F2365 2799164 LMOf2365_tRNA-Pro-2 tRNA LMOf2365_tRNA-Pro-2 NC_002973.6 1723086 1723159 R tRNA-Pro complement(1723086..1723159) Listeria monocytogenes serotype 4b str. F2365 2799674 LMOf2365_tRNA-Arg-3 tRNA LMOf2365_tRNA-Arg-3 NC_002973.6 1723170 1723243 R tRNA-Arg complement(1723170..1723243) Listeria monocytogenes serotype 4b str. F2365 2799639 LMOf2365_tRNA-Leu-3 tRNA LMOf2365_tRNA-Leu-3 NC_002973.6 1723256 1723341 R tRNA-Leu complement(1723256..1723341) Listeria monocytogenes serotype 4b str. F2365 2799663 LMOf2365_tRNA-Gly-4 tRNA LMOf2365_tRNA-Gly-4 NC_002973.6 1723363 1723434 R tRNA-Gly complement(1723363..1723434) Listeria monocytogenes serotype 4b str. F2365 2797402 LMOf2365_tRNA-Leu-4 tRNA LMOf2365_tRNA-Leu-4 NC_002973.6 1723449 1723530 R tRNA-Leu complement(1723449..1723530) Listeria monocytogenes serotype 4b str. F2365 2799696 LMOf2365_tRNA-Lys-3 tRNA LMOf2365_tRNA-Lys-3 NC_002973.6 1723536 1723608 R tRNA-Lys complement(1723536..1723608) Listeria monocytogenes serotype 4b str. F2365 2799705 LMOf2365_tRNA-Thr-2 tRNA LMOf2365_tRNA-Thr-2 NC_002973.6 1723649 1723724 R tRNA-Thr complement(1723649..1723724) Listeria monocytogenes serotype 4b str. F2365 2797188 LMOf2365_tRNA-Val-2 tRNA LMOf2365_tRNA-Val-2 NC_002973.6 1723733 1723805 R tRNA-Val complement(1723733..1723805) Listeria monocytogenes serotype 4b str. F2365 2797085 LMOf2365_tRNA-Arg-4 tRNA LMOf2365_tRNA-Arg-4 NC_002973.6 1757038 1757109 D tRNA-Arg 1757038..1757109 Listeria monocytogenes serotype 4b str. F2365 2797519 LMOf2365_tRNA-Leu-5 tRNA LMOf2365_tRNA-Leu-5 NC_002973.6 2150702 2150788 D tRNA-Leu 2150702..2150788 Listeria monocytogenes serotype 4b str. F2365 2797169 LMOf2365_tRNA-Glu-3 tRNA LMOf2365_tRNA-Glu-3 NC_002973.6 2205339 2205410 D tRNA-Glu 2205339..2205410 Listeria monocytogenes serotype 4b str. F2365 2799136 LMOf2365_tRNA-Thr-3 tRNA LMOf2365_tRNA-Thr-3 NC_002973.6 2205568 2205641 D tRNA-Thr 2205568..2205641 Listeria monocytogenes serotype 4b str. F2365 2798503 LMOf2365_tRNA-Tyr-1 tRNA LMOf2365_tRNA-Tyr-1 NC_002973.6 2205651 2205734 D tRNA-Tyr 2205651..2205734 Listeria monocytogenes serotype 4b str. F2365 2797943 LMOf2365_tRNA-Gln-1 tRNA LMOf2365_tRNA-Gln-1 NC_002973.6 2205746 2205820 D tRNA-Gln 2205746..2205820 Listeria monocytogenes serotype 4b str. F2365 2798332 LMOf2365_tRNA-Lys-4 tRNA LMOf2365_tRNA-Lys-4 NC_002973.6 2205827 2205902 D tRNA-Lys 2205827..2205902 Listeria monocytogenes serotype 4b str. F2365 2797816 LMOf2365_tRNA-Leu-6 tRNA LMOf2365_tRNA-Leu-6 NC_002973.6 2389821 2389904 R tRNA-Leu complement(2389821..2389904) Listeria monocytogenes serotype 4b str. F2365 2799626 LMOf2365_tRNA-Cys-1 tRNA LMOf2365_tRNA-Cys-1 NC_002973.6 2389950 2390023 R tRNA-Cys complement(2389950..2390023) Listeria monocytogenes serotype 4b str. F2365 2798908 LMOf2365_tRNA-Gly-5 tRNA LMOf2365_tRNA-Gly-5 NC_002973.6 2390043 2390114 R tRNA-Gly complement(2390043..2390114) Listeria monocytogenes serotype 4b str. F2365 2798909 LMOf2365_tRNA-Gln-2 tRNA LMOf2365_tRNA-Gln-2 NC_002973.6 2390120 2390191 R tRNA-Gln complement(2390120..2390191) Listeria monocytogenes serotype 4b str. F2365 2799244 LMOf2365_tRNA-His-2 tRNA LMOf2365_tRNA-His-2 NC_002973.6 2390221 2390293 R tRNA-His complement(2390221..2390293) Listeria monocytogenes serotype 4b str. F2365 2798343 LMOf2365_tRNA-Trp-1 tRNA LMOf2365_tRNA-Trp-1 NC_002973.6 2390309 2390382 R tRNA-Trp complement(2390309..2390382) Listeria monocytogenes serotype 4b str. F2365 2799722 LMOf2365_tRNA-Tyr-2 tRNA LMOf2365_tRNA-Tyr-2 NC_002973.6 2390390 2390473 R tRNA-Tyr complement(2390390..2390473) Listeria monocytogenes serotype 4b str. F2365 2797476 LMOf2365_tRNA-Phe-2 tRNA LMOf2365_tRNA-Phe-2 NC_002973.6 2390494 2390566 R tRNA-Phe complement(2390494..2390566) Listeria monocytogenes serotype 4b str. F2365 2797515 LMOf2365_tRNA-Asp-3 tRNA LMOf2365_tRNA-Asp-3 NC_002973.6 2390571 2390646 R tRNA-Asp complement(2390571..2390646) Listeria monocytogenes serotype 4b str. F2365 2797823 LMOf2365_tRNA-Met-4 tRNA LMOf2365_tRNA-Met-4 NC_002973.6 2390653 2390726 R tRNA-Met complement(2390653..2390726) Listeria monocytogenes serotype 4b str. F2365 2798157 LMOf2365_tRNA-Val-3 tRNA LMOf2365_tRNA-Val-3 NC_002973.6 2390748 2390823 R tRNA-Val complement(2390748..2390823) Listeria monocytogenes serotype 4b str. F2365 2798290 LMOf2365_tRNA-Glu-4 tRNA LMOf2365_tRNA-Glu-4 NC_002973.6 2390881 2390952 R tRNA-Glu complement(2390881..2390952) Listeria monocytogenes serotype 4b str. F2365 2798545 LMOf2365_tRNA-Ser-5 tRNA LMOf2365_tRNA-Ser-5 NC_002973.6 2390986 2391074 R tRNA-Ser complement(2390986..2391074) Listeria monocytogenes serotype 4b str. F2365 2798732 LMOf2365_tRNA-Asn-3 tRNA LMOf2365_tRNA-Asn-3 NC_002973.6 2391081 2391156 R tRNA-Asn complement(2391081..2391156) Listeria monocytogenes serotype 4b str. F2365 2799175 LMOf2365_tRNA-Ala-3 tRNA LMOf2365_tRNA-Ala-3 NC_002973.6 2394464 2394539 R tRNA-Ala complement(2394464..2394539) Listeria monocytogenes serotype 4b str. F2365 2799488 LMOf2365_tRNA-Ile-2 tRNA LMOf2365_tRNA-Ile-2 NC_002973.6 2394586 2394659 R tRNA-Ile complement(2394586..2394659) Listeria monocytogenes serotype 4b str. F2365 2798890 LMOf2365_tRNA-Arg-5 tRNA LMOf2365_tRNA-Arg-5 NC_002973.6 2494999 2495070 R tRNA-Arg complement(2494999..2495070) Listeria monocytogenes serotype 4b str. F2365 2799608 LMOf2365_tRNA-Thr-4 tRNA LMOf2365_tRNA-Thr-4 NC_002973.6 2621410 2621482 R tRNA-Thr complement(2621410..2621482) Listeria monocytogenes serotype 4b str. F2365 2799508 LMOf2365_tRNA-Asn-4 tRNA LMOf2365_tRNA-Asn-4 NC_002973.6 2621507 2621582 R tRNA-Asn complement(2621507..2621582) Listeria monocytogenes serotype 4b str. F2365 2799549 LMOf2365_tRNA-Ala-4 tRNA LMOf2365_tRNA-Ala-4 NC_002973.6 2624891 2624966 R tRNA-Ala complement(2624891..2624966) Listeria monocytogenes serotype 4b str. F2365 2799477 LMOf2365_tRNA-Ile-3 tRNA LMOf2365_tRNA-Ile-3 NC_002973.6 2625013 2625086 R tRNA-Ile complement(2625013..2625086) Listeria monocytogenes serotype 4b str. F2365 2799479 LMOf2365_tRNA-Val-4 tRNA LMOf2365_tRNA-Val-4 NC_002973.6 2891020 2891092 D tRNA-Val 2891020..2891092 Listeria monocytogenes serotype 4b str. F2365 2798830 LMOf2365_16SA rRNA rrsA NC_002973.6 242736 244246 D 16S ribosomal RNA 242736..244246 Listeria monocytogenes serotype 4b str. F2365 2796995 LMOf2365_23SA rRNA rrlA NC_002973.6 244528 247459 D 23S ribosomal RNA 244528..247459 Listeria monocytogenes serotype 4b str. F2365 2797020 LMOf2365_5SA rRNA rrfA NC_002973.6 247537 247652 D 5S ribosomal RNA 247537..247652 Listeria monocytogenes serotype 4b str. F2365 2797295 LMOf2365_16SB rRNA rrsB NC_002973.6 248755 250265 D 16S ribosomal RNA 248755..250265 Listeria monocytogenes serotype 4b str. F2365 2799008 LMOf2365_23SB rRNA rrlB NC_002973.6 250547 253478 D 23S ribosomal RNA 250547..253478 Listeria monocytogenes serotype 4b str. F2365 2798076 LMOf2365_5SB rRNA rrfB NC_002973.6 253556 253671 D 5S ribosomal RNA 253556..253671 Listeria monocytogenes serotype 4b str. F2365 2797042 LMOf2365_5SC rRNA rrfC NC_002973.6 1723815 1723930 R 5S ribosomal RNA complement(1723815..1723930) Listeria monocytogenes serotype 4b str. F2365 2797126 LMOf2365_23SC rRNA rrlC NC_002973.6 1724008 1726939 R 23S ribosomal RNA complement(1724008..1726939) Listeria monocytogenes serotype 4b str. F2365 2797477 LMOf2365_16SC rRNA rrsC NC_002973.6 1727221 1728731 R 16S ribosomal RNA complement(1727221..1728731) Listeria monocytogenes serotype 4b str. F2365 2797558 LMOf2365_5SD rRNA rrfD NC_002973.6 1828492 1828607 R 5S ribosomal RNA complement(1828492..1828607) Listeria monocytogenes serotype 4b str. F2365 2799838 LMOf2365_23SD rRNA rrlD NC_002973.6 1828685 1831616 R 23S ribosomal RNA complement(1828685..1831616) Listeria monocytogenes serotype 4b str. F2365 2798446 LMOf2365_16SD rRNA rrsD NC_002973.6 1831898 1833408 R 16S ribosomal RNA complement(1831898..1833408) Listeria monocytogenes serotype 4b str. F2365 2798650 LMOf2365_5SE rRNA rrfE NC_002973.6 2391167 2391282 R 5S ribosomal RNA complement(2391167..2391282) Listeria monocytogenes serotype 4b str. F2365 2799204 LMOf2365_23SE rRNA rrlE NC_002973.6 2391360 2394291 R 23S ribosomal RNA complement(2391360..2394291) Listeria monocytogenes serotype 4b str. F2365 2799228 LMOf2365_16SE rRNA rrsE NC_002973.6 2394824 2396334 R 16S ribosomal RNA complement(2394824..2396334) Listeria monocytogenes serotype 4b str. F2365 2799408 LMOf2365_5SF rRNA rrfF NC_002973.6 2621593 2621708 R 5S ribosomal RNA complement(2621593..2621708) Listeria monocytogenes serotype 4b str. F2365 2799472 LMOf2365_23SF rRNA rrlF NC_002973.6 2621787 2624718 R 23S ribosomal RNA complement(2621787..2624718) Listeria monocytogenes serotype 4b str. F2365 2799498 LMOf2365_16SF rRNA rrsF NC_002973.6 2625251 2626761 R 16S ribosomal RNA complement(2625251..2626761) Listeria monocytogenes serotype 4b str. F2365 2799485