-- dump date 20240506_065713 -- class Genbank::Contig -- table contig_comment -- id comment NZ_AP026966.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP026966.1.REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7;REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136xREFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel IIREFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035 CDSs (total) :: 4,934REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035 CDSs (total) :: 4,934 Genes (coding) :: 4,836REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035 CDSs (total) :: 4,934 Genes (coding) :: 4,836 CDSs (with protein) :: 4,836REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035 CDSs (total) :: 4,934 Genes (coding) :: 4,836 CDSs (with protein) :: 4,836 Genes (RNA) :: 101REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035 CDSs (total) :: 4,934 Genes (coding) :: 4,836 CDSs (with protein) :: 4,836 Genes (RNA) :: 101 rRNAs :: 7, 7, 7 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035 CDSs (total) :: 4,934 Genes (coding) :: 4,836 CDSs (with protein) :: 4,836 Genes (RNA) :: 101 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035 CDSs (total) :: 4,934 Genes (coding) :: 4,836 CDSs (with protein) :: 4,836 Genes (RNA) :: 101 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035 CDSs (total) :: 4,934 Genes (coding) :: 4,836 CDSs (with protein) :: 4,836 Genes (RNA) :: 101 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 5REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035 CDSs (total) :: 4,934 Genes (coding) :: 4,836 CDSs (with protein) :: 4,836 Genes (RNA) :: 101 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 5 Pseudo Genes (total) :: 98REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035 CDSs (total) :: 4,934 Genes (coding) :: 4,836 CDSs (with protein) :: 4,836 Genes (RNA) :: 101 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 5 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035 CDSs (total) :: 4,934 Genes (coding) :: 4,836 CDSs (with protein) :: 4,836 Genes (RNA) :: 101 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 5 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035 CDSs (total) :: 4,934 Genes (coding) :: 4,836 CDSs (with protein) :: 4,836 Genes (RNA) :: 101 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 5 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 36 of 98REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035 CDSs (total) :: 4,934 Genes (coding) :: 4,836 CDSs (with protein) :: 4,836 Genes (RNA) :: 101 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 5 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 36 of 98 Pseudo Genes (incomplete) :: 64 of 98REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035 CDSs (total) :: 4,934 Genes (coding) :: 4,836 CDSs (with protein) :: 4,836 Genes (RNA) :: 101 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 5 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 36 of 98 Pseudo Genes (incomplete) :: 64 of 98 Pseudo Genes (internal stop) :: 20 of 98REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035 CDSs (total) :: 4,934 Genes (coding) :: 4,836 CDSs (with protein) :: 4,836 Genes (RNA) :: 101 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 5 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 36 of 98 Pseudo Genes (incomplete) :: 64 of 98 Pseudo Genes (internal stop) :: 20 of 98 Pseudo Genes (multiple problems) :: 18 of 98REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035 CDSs (total) :: 4,934 Genes (coding) :: 4,836 CDSs (with protein) :: 4,836 Genes (RNA) :: 101 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 5 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 36 of 98 Pseudo Genes (incomplete) :: 64 of 98 Pseudo Genes (internal stop) :: 20 of 98 Pseudo Genes (multiple problems) :: 18 of 98 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP026966.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST https://dfast.ddbj.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 4.0; Falcon v. 0.3; Canu v. 0.7; Arrow v. 2.3.3; Plion v. 1.22 Genome Coverage :: 136x Sequencing Technology :: Illumina Hiseq PE150; PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 08/28/2023 05:35:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,035 CDSs (total) :: 4,934 Genes (coding) :: 4,836 CDSs (with protein) :: 4,836 Genes (RNA) :: 101 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 5 Pseudo Genes (total) :: 98 CDSs (without protein) :: 98 Pseudo Genes (ambiguous residues) :: 0 of 98 Pseudo Genes (frameshifted) :: 36 of 98 Pseudo Genes (incomplete) :: 64 of 98 Pseudo Genes (internal stop) :: 20 of 98 Pseudo Genes (multiple problems) :: 18 of 98 ##Genome-Annotation-Data-END## COMPLETENESS: full length.