-- dump date 20240506_002648 -- class Genbank::Contig -- table contig_comment -- id comment NC_017934.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP003532.1.REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla NesboREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com)REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com)REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNLREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 6 of 16REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 6 of 16 Pseudo Genes (incomplete) :: 8 of 16REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 6 of 16 Pseudo Genes (incomplete) :: 8 of 16 Pseudo Genes (internal stop) :: 3 of 16REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 6 of 16 Pseudo Genes (incomplete) :: 8 of 16 Pseudo Genes (internal stop) :: 3 of 16 Pseudo Genes (multiple problems) :: 1 of 16REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 6 of 16 Pseudo Genes (incomplete) :: 8 of 16 Pseudo Genes (internal stop) :: 3 of 16 Pseudo Genes (multiple problems) :: 1 of 16 CRISPR Arrays :: 7REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 6 of 16 Pseudo Genes (incomplete) :: 8 of 16 Pseudo Genes (internal stop) :: 3 of 16 Pseudo Genes (multiple problems) :: 1 of 16 CRISPR Arrays :: 7 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003532.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 6 of 16 Pseudo Genes (incomplete) :: 8 of 16 Pseudo Genes (internal stop) :: 3 of 16 Pseudo Genes (multiple problems) :: 1 of 16 CRISPR Arrays :: 7 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_017935.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP003533.1.REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla NesboREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com)REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com)REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNLREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 6 of 16REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 6 of 16 Pseudo Genes (incomplete) :: 8 of 16REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 6 of 16 Pseudo Genes (incomplete) :: 8 of 16 Pseudo Genes (internal stop) :: 3 of 16REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 6 of 16 Pseudo Genes (incomplete) :: 8 of 16 Pseudo Genes (internal stop) :: 3 of 16 Pseudo Genes (multiple problems) :: 1 of 16REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 6 of 16 Pseudo Genes (incomplete) :: 8 of 16 Pseudo Genes (internal stop) :: 3 of 16 Pseudo Genes (multiple problems) :: 1 of 16 CRISPR Arrays :: 7REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 6 of 16 Pseudo Genes (incomplete) :: 8 of 16 Pseudo Genes (internal stop) :: 3 of 16 Pseudo Genes (multiple problems) :: 1 of 16 CRISPR Arrays :: 7 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003533.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4088232 Source DNA and Organism available from Camilla Nesbo (camillaln@gmail.com) Contacts: Camilla Nesbo (camillaln@gmail.com) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Mesotoga prima MesG1AG4.2 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 2 ref_biomaterial :: Missing biotic_relationship :: Missing trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi06679 Funding Program :: DOE-CSP 2010 Gene Calling Method :: Prodigal 1.4, GenePRIMP ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/10/2023 09:35:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,684 CDSs (total) :: 2,629 Genes (coding) :: 2,613 CDSs (with protein) :: 2,613 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 16 CDSs (without protein) :: 16 Pseudo Genes (ambiguous residues) :: 0 of 16 Pseudo Genes (frameshifted) :: 6 of 16 Pseudo Genes (incomplete) :: 8 of 16 Pseudo Genes (internal stop) :: 3 of 16 Pseudo Genes (multiple problems) :: 1 of 16 CRISPR Arrays :: 7 ##Genome-Annotation-Data-END## COMPLETENESS: full length.