-- dump date   	20240506_001404
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NC_011832.1	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001338.1.REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen ZinderREFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802 Genes (coding)                    :: 2,761REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802 Genes (coding)                    :: 2,761 CDSs (with protein)               :: 2,761REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802 Genes (coding)                    :: 2,761 CDSs (with protein)               :: 2,761 Genes (RNA)                       :: 70REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802 Genes (coding)                    :: 2,761 CDSs (with protein)               :: 2,761 Genes (RNA)                       :: 70 rRNAs                             :: 6, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802 Genes (coding)                    :: 2,761 CDSs (with protein)               :: 2,761 Genes (RNA)                       :: 70 rRNAs                             :: 6, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 6, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802 Genes (coding)                    :: 2,761 CDSs (with protein)               :: 2,761 Genes (RNA)                       :: 70 rRNAs                             :: 6, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 6, 3, 3 (5S, 16S, 23S) tRNAs                             :: 56REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802 Genes (coding)                    :: 2,761 CDSs (with protein)               :: 2,761 Genes (RNA)                       :: 70 rRNAs                             :: 6, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 6, 3, 3 (5S, 16S, 23S) tRNAs                             :: 56 ncRNAs                            :: 2REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802 Genes (coding)                    :: 2,761 CDSs (with protein)               :: 2,761 Genes (RNA)                       :: 70 rRNAs                             :: 6, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 6, 3, 3 (5S, 16S, 23S) tRNAs                             :: 56 ncRNAs                            :: 2 Pseudo Genes (total)              :: 41REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802 Genes (coding)                    :: 2,761 CDSs (with protein)               :: 2,761 Genes (RNA)                       :: 70 rRNAs                             :: 6, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 6, 3, 3 (5S, 16S, 23S) tRNAs                             :: 56 ncRNAs                            :: 2 Pseudo Genes (total)              :: 41 CDSs (without protein)            :: 41REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802 Genes (coding)                    :: 2,761 CDSs (with protein)               :: 2,761 Genes (RNA)                       :: 70 rRNAs                             :: 6, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 6, 3, 3 (5S, 16S, 23S) tRNAs                             :: 56 ncRNAs                            :: 2 Pseudo Genes (total)              :: 41 CDSs (without protein)            :: 41 Pseudo Genes (ambiguous residues) :: 0 of 41REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802 Genes (coding)                    :: 2,761 CDSs (with protein)               :: 2,761 Genes (RNA)                       :: 70 rRNAs                             :: 6, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 6, 3, 3 (5S, 16S, 23S) tRNAs                             :: 56 ncRNAs                            :: 2 Pseudo Genes (total)              :: 41 CDSs (without protein)            :: 41 Pseudo Genes (ambiguous residues) :: 0 of 41 Pseudo Genes (frameshifted)       :: 13 of 41REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802 Genes (coding)                    :: 2,761 CDSs (with protein)               :: 2,761 Genes (RNA)                       :: 70 rRNAs                             :: 6, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 6, 3, 3 (5S, 16S, 23S) tRNAs                             :: 56 ncRNAs                            :: 2 Pseudo Genes (total)              :: 41 CDSs (without protein)            :: 41 Pseudo Genes (ambiguous residues) :: 0 of 41 Pseudo Genes (frameshifted)       :: 13 of 41 Pseudo Genes (incomplete)         :: 27 of 41REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802 Genes (coding)                    :: 2,761 CDSs (with protein)               :: 2,761 Genes (RNA)                       :: 70 rRNAs                             :: 6, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 6, 3, 3 (5S, 16S, 23S) tRNAs                             :: 56 ncRNAs                            :: 2 Pseudo Genes (total)              :: 41 CDSs (without protein)            :: 41 Pseudo Genes (ambiguous residues) :: 0 of 41 Pseudo Genes (frameshifted)       :: 13 of 41 Pseudo Genes (incomplete)         :: 27 of 41 Pseudo Genes (internal stop)      :: 15 of 41REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802 Genes (coding)                    :: 2,761 CDSs (with protein)               :: 2,761 Genes (RNA)                       :: 70 rRNAs                             :: 6, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 6, 3, 3 (5S, 16S, 23S) tRNAs                             :: 56 ncRNAs                            :: 2 Pseudo Genes (total)              :: 41 CDSs (without protein)            :: 41 Pseudo Genes (ambiguous residues) :: 0 of 41 Pseudo Genes (frameshifted)       :: 13 of 41 Pseudo Genes (incomplete)         :: 27 of 41 Pseudo Genes (internal stop)      :: 15 of 41 Pseudo Genes (multiple problems)  :: 11 of 41REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802 Genes (coding)                    :: 2,761 CDSs (with protein)               :: 2,761 Genes (RNA)                       :: 70 rRNAs                             :: 6, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 6, 3, 3 (5S, 16S, 23S) tRNAs                             :: 56 ncRNAs                            :: 2 Pseudo Genes (total)              :: 41 CDSs (without protein)            :: 41 Pseudo Genes (ambiguous residues) :: 0 of 41 Pseudo Genes (frameshifted)       :: 13 of 41 Pseudo Genes (incomplete)         :: 27 of 41 Pseudo Genes (internal stop)      :: 15 of 41 Pseudo Genes (multiple problems)  :: 11 of 41 CRISPR Arrays                     :: 1REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802 Genes (coding)                    :: 2,761 CDSs (with protein)               :: 2,761 Genes (RNA)                       :: 70 rRNAs                             :: 6, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 6, 3, 3 (5S, 16S, 23S) tRNAs                             :: 56 ncRNAs                            :: 2 Pseudo Genes (total)              :: 41 CDSs (without protein)            :: 41 Pseudo Genes (ambiguous residues) :: 0 of 41 Pseudo Genes (frameshifted)       :: 13 of 41 Pseudo Genes (incomplete)         :: 27 of 41 Pseudo Genes (internal stop)      :: 15 of 41 Pseudo Genes (multiple problems)  :: 11 of 41 CRISPR Arrays                     :: 1 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001338.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4043133 Source DNA and organism available from Stephen Zinder (shz1@cornell.edu) Contacts: Stephen Zinder (shz1@cornell.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/03/2024 03:35:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,872 CDSs (total)                      :: 2,802 Genes (coding)                    :: 2,761 CDSs (with protein)               :: 2,761 Genes (RNA)                       :: 70 rRNAs                             :: 6, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 6, 3, 3 (5S, 16S, 23S) tRNAs                             :: 56 ncRNAs                            :: 2 Pseudo Genes (total)              :: 41 CDSs (without protein)            :: 41 Pseudo Genes (ambiguous residues) :: 0 of 41 Pseudo Genes (frameshifted)       :: 13 of 41 Pseudo Genes (incomplete)         :: 27 of 41 Pseudo Genes (internal stop)      :: 15 of 41 Pseudo Genes (multiple problems)  :: 11 of 41 CRISPR Arrays                     :: 1 ##Genome-Annotation-Data-END## COMPLETENESS: full length.