-- dump date 20140619_144206 -- class Genbank::CDS -- table cds_note -- id note YP_002418899.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_002418900.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. YP_002418901.1 binds the polymerase to DNA and acts as a sliding clamp YP_002418902.1 KEGG: mex:Mext_0003 DNA replication and repair protein RecF; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; SMART: ATPase AAA YP_002418903.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: mpo:Mpop_0005 lysine exporter protein (LysE/YggA) YP_002418904.1 KEGG: mex:Mext_0005 transcription factor YP_002418905.1 KEGG: mex:Mext_0006 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase; HRDC domain protein; DEAD/DEAH box helicase; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases YP_002418906.1 KEGG: mex:Mext_0007 hypothetical protein YP_002418907.1 KEGG: mex:Mext_0008 hypothetical protein YP_002418908.1 KEGG: mex:Mext_0009 RecD/TraA family helicase; TIGRFAM: helicase, RecD/TraA family; SMART: DNA-binding protein; ATPase AAA YP_002418909.1 KEGG: mex:Mext_0010 hypothetical protein YP_002418910.1 KEGG: mex:Mext_0011 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_002418911.1 PFAM: BolA family protein; KEGG: mex:Mext_0012 BolA family protein YP_002418912.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: mex:Mext_0013 glutaredoxin-like protein YP_002418913.1 PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_0014 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002418914.1 PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: mex:Mext_0015 SMP-30/gluconolaconase/LRE domain-containing protein YP_002418915.1 KEGG: mex:Mext_0016 hypothetical protein YP_002418916.1 KEGG: mex:Mext_0017 hypothetical protein YP_002418917.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: mex:Mext_0018 ATPase domain-containing protein YP_002418918.1 KEGG: mex:Mext_0019 non-specific serine/threonine protein kinase; PFAM: Circadian clock protein KaiC central region; KaiA binding; SMART: ATPase AAA YP_002418919.1 KEGG: mex:Mext_0020 hypothetical protein YP_002418920.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_0021 short-chain dehydrogenase/reductase SDR YP_002418921.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_0022 GntR domain-containing protein YP_002418922.1 TIGRFAM: malonate decarboxylase, subunit alpha; KEGG: mex:Mext_0024 malonate decarboxylase, subunit alpha YP_002418923.1 acyl carrier protein of malonate decarboxylase YP_002418924.1 The subunit beta catalyzes the decarboxylation of the malonyl moiety on coenzyme A YP_002418925.1 TIGRFAM: malonate decarboxylase, subunit gamma; PFAM: malonate decarboxylase subunit gamma; KEGG: mex:Mext_0027 malonate decarboxylase, subunit gamma YP_002418926.1 TIGRFAM: holo-ACP synthase, malonate decarboxylase-specific; KEGG: mex:Mext_0028 hypothetical protein YP_002418927.1 KEGG: mex:Mext_0029 triphosphoribosyl-dephospho-CoA synthase MdcB; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; PFAM: triphosphoribosyl-dephospho-CoA protein YP_002418928.1 KEGG: mex:Mext_0030 acyl transferase domain-containing protein YP_002418929.1 KEGG: met:M446_1613 general secretion pathway protein K YP_002418930.1 PFAM: electron transporter SCO1/SenC; KEGG: met:M446_1393 electron transporter SCO1/SenC YP_002418931.1 KEGG: met:M446_1394 hypothetical protein YP_002418932.1 PFAM: ricin B lectin; hypothetical protein; Domain of unknown function DUF1929; KEGG: met:M446_1395 galactose oxidase YP_002418933.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: mpo:Mpop_0070 IstB domain protein ATP-binding protein YP_002418934.1 PFAM: integrase catalytic region; KEGG: mpo:Mpop_0069 integrase catalytic region YP_002418935.1 PFAM: phospholipase D/transphosphatidylase; KEGG: mex:Mext_0106 phospholipase D/transphosphatidylase YP_002418936.1 KEGG: bxe:Bxe_A2619 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002418937.1 KEGG: mex:Mext_0057 hypothetical protein YP_002418938.1 PFAM: peptidase M20; peptidase M42 family protein; KEGG: mex:Mext_0058 peptidase M42 family protein YP_002418939.1 PFAM: transposase mutator type; KEGG: mrd:Mrad2831_2616 transposase mutator type YP_002418940.1 KEGG: mrd:Mrad2831_5711 hypothetical protein YP_002418941.1 KEGG: mex:Mext_3809 hypothetical protein YP_002418942.1 KEGG: mex:Mext_1866 hypothetical protein YP_002418945.1 KEGG: mex:Mext_0782 hypothetical protein YP_002418946.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: response regulator receiver; KEGG: mex:Mext_0783 cyclic nucleotide-binding YP_002418947.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_0075 hypothetical protein YP_002418948.1 KEGG: mex:Mext_0785 hypothetical protein YP_002418949.1 KEGG: mrd:Mrad2831_4387 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002418950.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mrd:Mrad2831_1051 methyltransferase type 11 YP_002418951.1 KEGG: mpo:Mpop_3826 hypothetical protein YP_002418952.1 KEGG: mpo:Mpop_4881 hypothetical protein YP_002418953.1 KEGG: hypothetical protein YP_002418954.1 KEGG: mex:Mext_0117 hypothetical protein YP_002418956.1 PFAM: isochorismatase hydrolase; KEGG: mpo:Mpop_0480 isochorismatase hydrolase YP_002418957.1 KEGG: mex:Mext_0146 hypothetical protein YP_002418958.1 KEGG: mex:Mext_0147 hypothetical protein YP_002418959.1 KEGG: gdi:GDI0123 hypothetical protein YP_002418960.1 PFAM: integrase family protein; KEGG: mex:Mext_0081 integrase family protein YP_002418961.1 KEGG: mex:Mext_0084 hypothetical protein YP_002418962.1 KEGG: mex:Mext_0085 hypothetical protein YP_002418963.1 KEGG: mex:Mext_0168 hypothetical protein YP_002418964.1 KEGG: mex:Mext_0169 hypothetical protein YP_002418965.1 KEGG: mex:Mext_0088 hypothetical protein YP_002418966.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_0170 ROSMUCR transcriptional regulator YP_002418968.1 PFAM: restriction endonuclease; KEGG: xcb:XC_3184 Mrr restriction endonuclease YP_002418969.1 KEGG: nha:Nham_4025 hypothetical protein YP_002418970.1 PFAM: integrase family protein; KEGG: mex:Mext_0101 integrase family protein YP_002418971.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_0102 alpha/beta hydrolase fold YP_002418972.1 KEGG: mex:Mext_0103 hypothetical protein YP_002418973.1 PFAM: homocysteine S-methyltransferase; KEGG: amr:AM1_0903 homocysteine S-methyltransferase YP_002418974.1 PFAM: response regulator receiver; KEGG: met:M446_6212 response regulator receiver protein YP_002418975.1 KEGG: met:M446_6905 insertion sequence transposase protein YP_002418976.1 KEGG: mpo:Mpop_2180 hypothetical protein YP_002418977.1 KEGG: mex:Mext_0493 hypothetical protein YP_002418978.1 KEGG: mex:Mext_0110 hypothetical protein YP_002418979.1 PFAM: UspA domain protein; KEGG: mex:Mext_0489 UspA domain-containing protein YP_002418980.1 KEGG: bxe:Bxe_B2278 hypothetical protein YP_002418981.1 KEGG: mex:Mext_0766 hypothetical protein YP_002418982.1 KEGG: mpo:Mpop_3826 hypothetical protein YP_002418983.1 KEGG: mpo:Mpop_4881 hypothetical protein YP_002418984.1 KEGG: hypothetical protein YP_002418985.1 KEGG: mex:Mext_2419 hypothetical protein YP_002418988.1 PFAM: Hemolysin-type calcium-binding region; Animal haem peroxidase; KEGG: rpe:RPE_1007 heme peroxidase YP_002418989.1 KEGG: mrd:Mrad2831_3884 hypothetical protein YP_002418990.1 KEGG: mpo:Mpop_4259 hypothetical protein YP_002418991.1 PFAM: acyltransferase 3; KEGG: bid:Bind_1595 acyltransferase 3 YP_002418992.1 KEGG: mrd:Mrad2831_6451 hypothetical protein YP_002418993.1 PFAM: peptidase M23; KEGG: swi:Swit_4002 peptidase M23B YP_002418994.1 KEGG: bce:BC4487 superfamily I DNA/RNA helicase YP_002418995.1 PFAM: integrase family protein; KEGG: mex:Mext_0101 integrase family protein YP_002418996.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_002418997.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: mex:Mext_0177 phosphoribosylanthranilate isomerase YP_002418998.1 KEGG: mex:Mext_0178 hypothetical protein YP_002418999.1 TIGRFAM: integration host factor subunit beta; PFAM: histone family protein DNA-binding protein; KEGG: mex:Mext_0179 integration host factor subunit beta YP_002419000.1 TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: mex:Mext_0180 signal peptide peptidase SppA, 36K type YP_002419001.1 KEGG: mex:Mext_0181 hypothetical protein YP_002419002.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_002419003.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: mex:Mext_0183 RNA methyltransferase YP_002419004.1 PFAM: pirin; KEGG: mex:Mext_0185 pirin domain-containing protein YP_002419005.1 TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mex:Mext_0186 potassium efflux system protein YP_002419006.1 PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: mex:Mext_0187 cytochrome C biogenesis protein transmembrane region YP_002419007.1 PFAM: HhH-GPD family protein; KEGG: mex:Mext_0188 HhH-GPD family protein YP_002419008.1 KEGG: mex:Mext_0189 hypothetical protein YP_002419009.1 KEGG: mex:Mext_0190 hypothetical protein YP_002419010.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0191 chemotaxis sensory transducer YP_002419011.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_0192 ABC transporter YP_002419012.1 KEGG: mex:Mext_0193 hypothetical protein YP_002419013.1 KEGG: mex:Mext_0194 hypothetical protein YP_002419014.1 KEGG: mex:Mext_0195 hypothetical protein YP_002419015.1 KEGG: mex:Mext_0196 hypothetical protein YP_002419016.1 KEGG: mex:Mext_0197 hypothetical protein YP_002419017.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_0198 glycosyl transferase group 1 YP_002419018.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_0199 glycosyl transferase group 1 YP_002419019.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: glycosyl transferase group 1; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: mex:Mext_0200 HAD family hydrolase YP_002419020.1 KEGG: mex:Mext_0201 sugar transferase YP_002419021.1 KEGG: mex:Mext_0202 hypothetical protein YP_002419022.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0203 glycosyl transferase YP_002419023.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_0204 glycosyl transferase group 1 YP_002419024.1 KEGG: mex:Mext_0205 hypothetical protein YP_002419025.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mex:Mext_0206 metal-dependent phosphohydrolase YP_002419026.1 PFAM: ABC transporter; KEGG: mex:Mext_0207 ABC transporter related YP_002419027.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: mex:Mext_0208 ThiJ/PfpI domain-containing protein YP_002419028.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_0209 short-chain dehydrogenase/reductase SDR YP_002419029.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_0210 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_002419030.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_0211 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_002419031.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: mex:Mext_0212 C4-dicarboxylate transporter/malic acid transport protein YP_002419032.1 PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_0213 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_002419033.1 PFAM: FAD linked oxidase; KEGG: mex:Mext_0214 FAD linked oxidase domain-containing protein YP_002419034.1 KEGG: mex:Mext_0215 chaperone protein HtpG YP_002419035.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mex:Mext_0216 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002419036.1 PFAM: polysulphide reductase NrfD; KEGG: mex:Mext_0217 polysulphide reductase NrfD YP_002419037.1 KEGG: mex:Mext_0218 hypothetical protein YP_002419038.1 KEGG: mex:Mext_0219 hypothetical protein YP_002419039.1 KEGG: mex:Mext_0220 hypothetical protein YP_002419040.1 KEGG: mex:Mext_0221 hypothetical protein YP_002419041.1 TIGRFAM: cytochrome C oxidase subunit II; PFAM: cytochrome C oxidase subunit II; cytochrome C class I; KEGG: mex:Mext_0222 cytochrome C oxidase subunit II YP_002419042.1 KEGG: mex:Mext_0223 cytochrome C oxidase subunit I; TIGRFAM: cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I YP_002419043.1 PFAM: cytochrome C oxidase subunit III; KEGG: mex:Mext_0224 cytochrome C oxidase subunit III YP_002419044.1 TIGRFAM: caa(3)-type oxidase subunit IV; KEGG: mex:Mext_0225 caa(3)-type oxidase subunit IV YP_002419045.1 KEGG: mex:Mext_0227 hypothetical protein YP_002419046.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_0228 sigma-70 family RNA polymerase sigma factor YP_002419047.1 KEGG: mex:Mext_0229 hypothetical protein YP_002419048.1 PFAM: catalase; KEGG: mex:Mext_0230 catalase domain-containing protein YP_002419049.1 PFAM: cytochrome B561; KEGG: mex:Mext_0231 cytochrome b561 YP_002419051.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions YP_002419052.1 KEGG: mpo:Mpop_0953 hypothetical protein YP_002419053.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase subunit beta; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mex:Mext_0234 K+-transporting ATPase subunit beta YP_002419054.1 one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex YP_002419055.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: mex:Mext_0236 osmosensitive K channel His kinase sensor YP_002419056.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0237 response regulator receiver YP_002419057.1 KEGG: mex:Mext_0238 hypothetical protein YP_002419058.1 KEGG: mex:Mext_0239 TRAP-type uncharacterized transport system periplasmic component-like protein YP_002419059.1 KEGG: mex:Mext_0240 hypothetical protein YP_002419060.1 PFAM: methyltransferase ; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_0241 methyltransferase type 11 YP_002419061.1 PFAM: phosphoglycerate mutase; KEGG: mex:Mext_0242 phosphoglycerate mutase YP_002419062.1 PFAM: myo-inositol-1-phosphate synthase; myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: mex:Mext_0243 myo-inositol-1-phosphate synthase YP_002419063.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_0244 NAD-dependent epimerase/dehydratase YP_002419064.1 KEGG: mex:Mext_0245 hypothetical protein YP_002419065.1 KEGG: mex:Mext_0246 hypothetical protein YP_002419066.1 KEGG: mex:Mext_0247 hypothetical protein YP_002419067.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_0248 glycosyl transferase group 1 YP_002419068.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_0249 radical SAM domain-containing protein YP_002419069.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_0250 NAD-dependent epimerase/dehydratase YP_002419070.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: mex:Mext_0251 NAD-dependent epimerase/dehydratase YP_002419071.1 PFAM: peptidase M16 domain protein; KEGG: mpo:Mpop_2284 peptidase M16 domain protein YP_002419072.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: met:M446_4177 redoxin domain-containing protein YP_002419073.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: sme:SMc01851 amino acid efflux protein YP_002419074.1 TIGRFAM: arginase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: met:M446_1825 arginase YP_002419075.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mpo:Mpop_4647 pyridoxal-5'-phosphate-dependent protein beta subunit YP_002419076.1 PFAM: Secretin/TonB short domain; KEGG: mpo:Mpop_4653 TonB-dependent receptor plug YP_002419077.1 PFAM: FecR protein; KEGG: met:M446_3438 anti-FecI sigma factor, FecR YP_002419078.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: met:M446_3437 ECF subfamily RNA polymerase sigma-24 factor YP_002419079.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_3812 hypothetical protein YP_002419080.1 KEGG: mex:Mext_3813 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002419082.1 PFAM: transglycosylase; KEGG: mex:Mext_3814 transglycosylase YP_002419083.1 KEGG: mex:Mext_3815 hypothetical protein YP_002419084.1 KEGG: mex:Mext_3816 hypothetical protein YP_002419085.1 KEGG: mex:Mext_3817 hypothetical protein YP_002419086.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3801 carbonate dehydratase YP_002419087.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_3802 aldo/keto reductase YP_002419088.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: mex:Mext_3803 diguanylate cyclase YP_002419089.1 PFAM: EAL domain protein; GAF domain protein; KEGG: mex:Mext_3804 EAL domain-containing protein YP_002419090.1 KEGG: mex:Mext_3805 hypothetical protein YP_002419091.1 PFAM: regulatory protein LysR; KEGG: mex:Mext_3806 regulatory protein LysR YP_002419092.1 KEGG: mex:Mext_3807 hypothetical protein YP_002419093.1 KEGG: mex:Mext_3808 hypothetical protein YP_002419094.1 KEGG: mrd:Mrad2831_4845 hypothetical protein YP_002419096.1 KEGG: mex:Mext_3810 hypothetical protein YP_002419097.1 KEGG: mex:Mext_3359 hypothetical protein YP_002419098.1 KEGG: mex:Mext_3360 hypothetical protein YP_002419099.1 KEGG: mex:Mext_3361 hypothetical protein YP_002419100.1 KEGG: mrd:Mrad2831_4908 hypothetical protein YP_002419101.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rpc:RPC_2016 AraC family transcriptional regulator YP_002419102.1 PFAM: type IV pilus assembly PilZ; KEGG: met:M446_4427 type IV pilus assembly PilZ YP_002419103.1 KEGG: mva:Mvan_3112 alpha/beta hydrolase fold YP_002419104.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rpc:RPC_2016 AraC family transcriptional regulator YP_002419105.1 KEGG: mpo:Mpop_1194 conserved hypothetical protein; flagellin C-ter domain YP_002419106.1 KEGG: mag:amb0529 hypothetical protein YP_002419107.1 KEGG: rpt:Rpal_2114 hypothetical protein YP_002419109.1 PFAM: flagellin domain protein; KEGG: met:M446_5135 flagellin domain-containing protein YP_002419110.1 PFAM: integrase family protein; KEGG: rpe:RPE_0558 phage integrase family protein YP_002419111.1 PFAM: integrase family protein; KEGG: mrd:Mrad2831_5749 integrase family protein YP_002419112.1 PFAM: regulatory protein MerR; Prophage CP4-57 regulatory; KEGG: mpo:Mpop_1340 DNA binding domain protein, excisionase family YP_002419113.1 KEGG: mpo:Mpop_5395 hypothetical protein YP_002419116.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: mag:amb1159 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase/FAD synthetase and related enzyme YP_002419117.1 KEGG: mpo:Mpop_2730 hypothetical protein YP_002419118.1 PFAM: helix-turn-helix domain protein; KEGG: nfa:nfa22390 transcriptional regulator YP_002419119.1 KEGG: mrd:Mrad2831_1232 HNH nuclease YP_002419122.1 KEGG: UCP2; uncoupling protein YP_002419124.1 KEGG: met:M446_0951 hypothetical protein YP_002419125.1 PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: gbe:GbCGDNIH1_1593 transcriptional repressor YP_002419126.1 KEGG: ecp:ECP_1147 hypothetical protein YP_002419130.1 KEGG: mrd:Mrad2831_5725 hypothetical protein YP_002419131.1 PFAM: endodeoxyribonuclease RusA; KEGG: mex:Mext_2442 hypothetical protein YP_002419134.1 KEGG: mrd:Mrad2831_5718 hypothetical protein YP_002419135.1 KEGG: sth:STH2761 NrdR family transcriptional regulator YP_002419136.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_2438 ROSMUCR transcriptional regulator YP_002419138.1 KEGG: met:M446_2057 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; MHYT domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002419139.1 KEGG: mrd:Mrad2831_0291 hypothetical protein YP_002419140.1 KEGG: mex:Mext_0103 hypothetical protein YP_002419141.1 KEGG: mrd:Mrad2831_5940 hypothetical protein YP_002419142.1 KEGG: mpo:Mpop_2771 hypothetical protein YP_002419144.1 KEGG: bph:Bphy_1890 hypothetical protein YP_002419145.1 PFAM: terminase GpA; KEGG: ecx:EcHS_A2094 phage terminase large subunit (GpA) YP_002419147.1 TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; KEGG: rso:RSc0857 bacteriophage-like protein YP_002419148.1 PFAM: peptidase S49; KEGG: rsq:Rsph17025_1752 peptidase S49 YP_002419149.1 KEGG: mucin-associated surface protein (MASP) YP_002419150.1 KEGG: rso:RSc0859 bacteriophage-like protein YP_002419151.1 KEGG: rso:RSc0860 bacteriophage-like protein YP_002419153.1 KEGG: nwi:Nwi_0805 hypothetical protein YP_002419154.1 KEGG: nwi:Nwi_0802 hypothetical protein YP_002419155.1 KEGG: nwi:Nwi_0801 hypothetical protein YP_002419156.1 KEGG: nwi:Nwi_0800 hypothetical protein YP_002419157.1 KEGG: nwi:Nwi_0799 hypothetical protein YP_002419158.1 KEGG: nwi:Nwi_0798 hypothetical protein YP_002419159.1 KEGG: nwi:Nwi_0797 phage-related minor tail protein YP_002419160.1 KEGG: mpo:Mpop_2674 hypothetical protein YP_002419161.1 PFAM: Domain of unknown function DUF1833; KEGG: mag:amb0393 hypothetical protein YP_002419162.1 KEGG: mex:Mext_3535 NLP/P60 protein YP_002419163.1 KEGG: mex:Mext_3537 hypothetical protein YP_002419164.1 KEGG: mex:Mext_3534 hypothetical protein YP_002419165.1 KEGG: mrd:Mrad2831_4981 hypothetical protein YP_002419166.1 KEGG: azc:AZC_2161 hypothetical protein YP_002419168.1 KEGG: mpo:Mpop_3138 hypothetical protein YP_002419169.1 PFAM: peptidoglycan-binding protein; KEGG: mex:Mext_4383 peptidoglycan binding domain-containing protein YP_002419170.1 KEGG: mex:Mext_4382 hypothetical protein YP_002419171.1 KEGG: xau:Xaut_3728 hypothetical protein YP_002419173.1 KEGG: mpo:Mpop_3761 hypothetical protein YP_002419174.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mrd:Mrad2831_2428 diguanylate cyclase/phosphodiesterase YP_002419175.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rpc:RPC_1770 cytidine/deoxycytidylate deaminase, zinc-binding region YP_002419178.1 KEGG: mex:Mext_0359 hypothetical protein YP_002419179.1 KEGG: mex:Mext_0360 hypothetical protein YP_002419180.1 PFAM: peptidase S24 and S26 domain protein; KEGG: mex:Mext_0361 peptidase S24/S26 domain-containing protein YP_002419181.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: mex:Mext_3517 DNA-directed DNA polymerase YP_002419182.1 PFAM: nuclease (SNase domain protein); KEGG: mex:Mext_0111 nuclease YP_002419183.1 KEGG: mpo:Mpop_4259 hypothetical protein YP_002419184.1 PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: mex:Mext_0275 recombination factor protein RarA YP_002419185.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: mex:Mext_0276 carboxypeptidase Taq YP_002419186.1 KEGG: mex:Mext_0277 molecular chaperone, HSP70 class YP_002419187.1 KEGG: mex:Mext_0278 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase YP_002419188.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_0280 HAD family hydrolase YP_002419189.1 PFAM: ATP12 ATPase; KEGG: mex:Mext_0281 ATP12 ATPase YP_002419191.1 PFAM: carboxyl transferase; KEGG: mex:Mext_0282 carboxyl transferase YP_002419192.1 KEGG: mex:Mext_0283 hypothetical protein YP_002419193.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_0284 regulatory protein TetR YP_002419194.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_002419195.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_0286 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_002419196.1 KEGG: mex:Mext_0287 hypothetical protein YP_002419197.1 TIGRFAM: crotonyl-CoA reductase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_0288 crotonyl-CoA reductase YP_002419198.1 PFAM: catalase; KEGG: mex:Mext_0289 catalase YP_002419199.1 KEGG: mex:Mext_0290 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein YP_002419200.1 KEGG: mex:Mext_0291 hypothetical protein YP_002419201.1 PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: mex:Mext_0292 short-chain dehydrogenase/reductase SDR YP_002419202.1 SMART: regulatory protein ArsR; KEGG: mex:Mext_0293 regulatory protein ArsR YP_002419203.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002419204.1 KEGG: mex:Mext_0295 hypothetical protein YP_002419205.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D YP_002419206.1 PFAM: peptidase C15 pyroglutamyl peptidase I; KEGG: mex:Mext_0297 peptidase C15 pyroglutamyl peptidase I YP_002419207.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transporters, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins YP_002419208.1 PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: mex:Mext_0299 protein of unknown function DUF900 hydrolase family protein YP_002419209.1 KEGG: mex:Mext_0300 hypothetical protein YP_002419210.1 PFAM: peptidase S15; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: mex:Mext_0301 peptidase S9 prolyl oligopeptidase YP_002419211.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_0302 ErfK/YbiS/YcfS/YnhG family protein YP_002419212.1 KEGG: mex:Mext_0303 hypothetical protein YP_002419213.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: mex:Mext_0304 nuclease SbcCD, D subunit YP_002419214.1 PFAM: SMC domain protein; KEGG: mex:Mext_0305 SMC domain-containing protein YP_002419215.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_0306 major facilitator transporter YP_002419216.1 KEGG: mex:Mext_0307 competence protein F YP_002419217.1 KEGG: mex:Mext_0308 hypothetical protein YP_002419218.1 PFAM: methyltransferase type 11; KEGG: mex:Mext_0309 methyltransferase type 11 YP_002419219.1 PFAM: protein of unknown function DUF427; KEGG: mex:Mext_0310 hypothetical protein YP_002419220.1 KEGG: mex:Mext_0311 hypothetical protein YP_002419221.1 TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: mex:Mext_0312 mutator MutT protein YP_002419222.1 PFAM: protein of unknown function DUF541; KEGG: mex:Mext_0313 hypothetical protein YP_002419223.1 KEGG: mex:Mext_0314 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ YP_002419224.1 KEGG: mex:Mext_0315 sensor histidine kinase YP_002419225.1 PFAM: glutathione peroxidase; KEGG: mex:Mext_0316 glutathione peroxidase YP_002419226.1 KEGG: mrd:Mrad2831_2681 hypothetical protein YP_002419227.1 KEGG: mex:Mext_0317 hypothetical protein YP_002419228.1 KEGG: mex:Mext_0318 hypothetical protein YP_002419229.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain YP_002419230.1 KEGG: mex:Mext_0320 hypothetical protein YP_002419231.1 KEGG: mex:Mext_0321 hypothetical protein YP_002419232.1 PFAM: UvrD/REP helicase; KEGG: mex:Mext_0322 UvrD/REP helicase YP_002419233.1 PFAM: PhoH family protein; KEGG: mex:Mext_0323 PhoH family protein YP_002419234.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: mex:Mext_0324 MIP family channel protein YP_002419235.1 PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: mex:Mext_0325 exonuclease RNase T and DNA polymerase III YP_002419236.1 KEGG: mpo:Mpop_0402 bicupin, oxalate decarboxylase family; TIGRFAM: bicupin, oxalate decarboxylase family; PFAM: Cupin domain protein; cupin YP_002419237.1 PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; KEGG: mex:Mext_0326 (glutamate--ammonia-ligase) adenylyltransferase YP_002419238.1 KEGG: mex:Mext_0327 hypothetical protein YP_002419239.1 KEGG: mpo:Mpop_0404 hypothetical protein YP_002419240.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0328 ATPase domain-containing protein YP_002419241.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0329 response regulator receiver YP_002419242.1 PFAM: OsmC family protein; KEGG: mex:Mext_0330 OsmC family protein YP_002419243.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_0331 ABC transporter YP_002419244.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_0332 binding-protein-dependent transport systems inner membrane component YP_002419245.1 TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: mex:Mext_0334 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein YP_002419246.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein YP_002419247.1 PFAM: GrpE protein; KEGG: mex:Mext_0336 ribulose-phosphate 3-epimerase YP_002419248.1 PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: mex:Mext_0339 prephenate dehydratase YP_002419249.1 KEGG: mex:Mext_0340 3-deoxy-D-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase YP_002419250.1 PFAM: cytochrome C class I; KEGG: mex:Mext_0341 cytochrome c class I YP_002419251.1 PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_0342 extracellular solute-binding protein YP_002419252.1 PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_0343 extracellular solute-binding protein YP_002419253.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_0344 binding-protein-dependent transport systems inner membrane component YP_002419254.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_0345 GCN5-related N-acetyltransferase YP_002419255.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_0346 AMP-dependent synthetase and ligase YP_002419256.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0347 glycosyl transferase YP_002419257.1 KEGG: mpo:Mpop_1057 transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002419258.1 KEGG: mpo:Mpop_1056 hypothetical protein YP_002419259.1 PFAM: CsbD family protein; KEGG: mex:Mext_0364 CsbD family protein YP_002419260.1 KEGG: mex:Mext_0365 hypothetical protein YP_002419261.1 PFAM: CsbD family protein; KEGG: mex:Mext_0366 CsbD family protein YP_002419262.1 KEGG: mex:Mext_0367 CsbD family protein YP_002419263.1 KEGG: mpo:Mpop_1051 hypothetical protein YP_002419264.1 PFAM: protein of unknown function UPF0187; KEGG: mex:Mext_0368 hypothetical protein YP_002419265.1 TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mex:Mext_0369 acetylornithine deacetylase (ArgE) YP_002419266.1 protein associated with Co2+ and Mg2+ efflux YP_002419267.1 KEGG: mex:Mext_0371 hypothetical protein YP_002419268.1 Catalyzes the deamination of dCTP to form dUTP YP_002419269.1 PFAM: formate/nitrite transporter; KEGG: mex:Mext_0373 transporter, YfdC-like protein YP_002419270.1 PFAM: molybdopterin binding domain; KEGG: mex:Mext_0374 molybdopterin binding domain-containing protein YP_002419271.1 PFAM: sugar fermentation stimulation protein; KEGG: mex:Mext_0375 sugar fermentation stimulation protein YP_002419272.1 TIGRFAM: methyltransferase FkbM family; KEGG: mex:Mext_0376 FkbM family methyltransferase YP_002419273.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_0377 alpha/beta hydrolase fold YP_002419274.1 KEGG: mex:Mext_0378 hypothetical protein YP_002419275.1 PFAM: ABC transporter; KEGG: mex:Mext_0379 ABC-2 type transporter YP_002419276.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_0380 ABC transporter YP_002419277.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mex:Mext_0381 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002419278.1 KEGG: mex:Mext_0382 hypothetical protein YP_002419279.1 KEGG: mex:Mext_0383 hypothetical protein YP_002419280.1 KEGG: mex:Mext_0384 hypothetical protein YP_002419281.1 KEGG: mex:Mext_0385 molybdopterin-guanine dinucleotide biosynthesis protein A YP_002419282.1 KEGG: mex:Mext_0386 hypothetical protein YP_002419283.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: mex:Mext_0387 cytoplasmic chaperone TorD family protein YP_002419284.1 TIGRFAM: formate dehydrogenase region TAT target; KEGG: mex:Mext_0388 formate dehydrogenase region TAT target YP_002419285.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mex:Mext_0389 molybdopterin oxidoreductase YP_002419286.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mpo:Mpop_0458 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_002419287.1 TIGRFAM: formate dehydrogenase, subunit gamma; KEGG: mex:Mext_0391 formate dehydrogenase, subunit gamma YP_002419288.1 KEGG: mex:Mext_0392 hypothetical protein YP_002419289.1 KEGG: mex:Mext_0393 hypothetical protein YP_002419290.1 KEGG: mex:Mext_0394 hypothetical protein YP_002419291.1 KEGG: mpo:Mpop_0463 hypothetical protein YP_002419292.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_0395 regulatory protein TetR YP_002419293.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_0396 RND family efflux transporter MFP subunit YP_002419294.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_0397 acriflavin resistance protein YP_002419295.1 KEGG: mex:Mext_0398 hypothetical protein YP_002419296.1 negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons YP_002419297.1 KEGG: mex:Mext_0400 hypothetical protein YP_002419298.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs YP_002419299.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine YP_002419300.1 KEGG: mex:Mext_0403 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: radical SAM protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_002419301.1 KEGG: mex:Mext_0404 extracellular ligand-binding receptor YP_002419302.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_0405 uroporphyrin-III C/tetrapyrrole methyltransferase YP_002419303.1 PFAM: protein of unknown function UPF0102; KEGG: mex:Mext_0406 hypothetical protein YP_002419304.1 PFAM: response regulator receiver; KEGG: mex:Mext_0407 response regulator receiver YP_002419305.1 PFAM: substrate-binding region of ABC-type glycine betaine transporter; KEGG: mex:Mext_0408 substrate-binding region of ABC-type glycine betaine transporter YP_002419306.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_0409 binding-protein-dependent transport systems inner membrane component YP_002419307.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_0410 binding-protein-dependent transport systems inner membrane component YP_002419308.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_0411 ErfK/YbiS/YcfS/YnhG family protein YP_002419309.1 PFAM: Extensin family protein; KEGG: mex:Mext_0412 extensin family protein YP_002419310.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: mex:Mext_0413 peptidyl-dipeptidase DCP YP_002419311.1 PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: mex:Mext_0414 formate--tetrahydrofolate ligase YP_002419312.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mex:Mext_0415 heavy metal transport/detoxification protein YP_002419313.1 PFAM: EAL domain protein; KEGG: mex:Mext_0416 EAL domain-containing protein YP_002419314.1 KEGG: mex:Mext_0417 hypothetical protein YP_002419315.1 KEGG: mex:Mext_0418 chemotaxis protein YP_002419316.1 PFAM: response regulator receiver; KEGG: mpo:Mpop_0489 response regulator receiver protein YP_002419317.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; riboflavin kinase; KEGG: mex:Mext_0420 riboflavin biosynthesis protein RibF YP_002419318.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_0421 glyoxylate reductase YP_002419319.1 PFAM: protein of unknown function DUF1058; KEGG: mex:Mext_0422 hypothetical protein YP_002419320.1 PFAM: ferric-uptake regulator; KEGG: mex:Mext_0423 ferric-uptake regulator YP_002419321.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP YP_002419322.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP YP_002419323.1 KEGG: mpo:Mpop_0496 hypothetical protein YP_002419324.1 KEGG: mex:Mext_0426 short-chain dehydrogenase/reductase SDR YP_002419325.1 KEGG: mex:Mext_0427 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_002419326.1 PFAM: DoxX family protein; KEGG: mex:Mext_0428 DoxX family protein YP_002419327.1 KEGG: mex:Mext_0429 tetratricopeptide TPR_4 protein YP_002419328.1 KEGG: mex:Mext_0430 hypothetical protein YP_002419329.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: mex:Mext_0431 oligopeptidase B YP_002419330.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_0432 ROSMUCR transcriptional regulator YP_002419331.1 KEGG: mex:Mext_0433 hypothetical protein YP_002419332.1 KEGG: mex:Mext_0434 hypothetical protein YP_002419333.1 PFAM: Fe-S metabolism associated SufE; KEGG: mex:Mext_0435 Fe-S metabolism associated SufE YP_002419334.1 KEGG: mex:Mext_0436 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; hypothetical protein; SMART: PAC repeat-containing protein YP_002419335.1 KEGG: mex:Mext_0437 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002419336.1 KEGG: mex:Mext_0438 hypothetical protein YP_002419337.1 KEGG: mex:Mext_0439 hypothetical protein YP_002419338.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_0440 glyoxalase/bleomycin resistance protein/dioxygenase YP_002419339.1 KEGG: mex:Mext_0541 hypothetical protein YP_002419340.1 TIGRFAM: aminopeptidase N; PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: mex:Mext_0542 aminopeptidase N YP_002419341.1 KEGG: mex:Mext_0543 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002419342.1 TIGRFAM: arginase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: mex:Mext_0544 arginase YP_002419343.1 KEGG: mex:Mext_0545 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_002419344.1 KEGG: mex:Mext_0546 hypothetical protein YP_002419345.1 KEGG: mex:Mext_0547 hypothetical protein YP_002419346.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: mex:Mext_0548 CutA1 divalent ion tolerance protein YP_002419347.1 PFAM: ATP-NAD/AcoX kinase; KEGG: mex:Mext_0549 NAD(+) kinase YP_002419348.1 PFAM: protein of unknown function DUF1674; KEGG: mex:Mext_0550 hypothetical protein YP_002419349.1 PFAM: Fmu (Sun) domain protein; methyltransferase small; methyltransferase type 11; KEGG: mex:Mext_0551 Fmu (Sun) domain-containing protein YP_002419350.1 KEGG: mex:Mext_0552 hypothetical protein YP_002419351.1 KEGG: mex:Mext_0553 hypothetical protein YP_002419352.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III; KEGG: mex:Mext_0554 aminotransferase class I and II YP_002419353.1 KEGG: mex:Mext_0555 hypothetical protein YP_002419354.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: mex:Mext_0556 malonyl CoA-acyl carrier protein transacylase YP_002419355.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: mex:Mext_0557 3-oxoacyl-(acyl-carrier-protein) reductase YP_002419356.1 carries the fatty acid chain in fatty acid biosynthesis YP_002419357.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: mex:Mext_0559 3-oxoacyl-(acyl-carrier-protein) synthase 2 YP_002419358.1 PFAM: aminodeoxychorismate lyase; KEGG: mex:Mext_0560 aminodeoxychorismate lyase YP_002419359.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: mex:Mext_0561 HAD family hydrolase YP_002419360.1 PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: mex:Mext_0562 kojibiose phosphorylase YP_002419361.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: mex:Mext_0563 acetate kinase YP_002419362.1 PFAM: secretion protein HlyD; KEGG: mex:Mext_0564 secretion protein HlyD YP_002419363.1 PFAM: ABC transporter; ABC-2 type transporter; SMART: ATPase AAA; KEGG: mex:Mext_0565 ABC transporter YP_002419364.1 PFAM: ABC transporter; KEGG: mex:Mext_0566 ABC-2 type transporter YP_002419365.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: mex:Mext_0567 phosphoketolase YP_002419366.1 PFAM: monooxygenase FAD-binding; KEGG: mex:Mext_0568 monooxygenase FAD-binding YP_002419367.1 KEGG: mrd:Mrad2831_5192 hypothetical protein YP_002419368.1 KEGG: mrd:Mrad2831_4144 hypothetical protein YP_002419370.1 KEGG: mpo:Mpop_0167 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002419371.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mrd:Mrad2831_5233 histidine kinase YP_002419372.1 PFAM: ATP-binding region ATPase domain protein; stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mrd:Mrad2831_5232 anti-sigma regulatory factor, serine/threonine protein kinase YP_002419373.1 PFAM: ATP-binding region ATPase domain protein; KEGG: mrd:Mrad2831_5231 anti-sigma regulatory factor, serine/threonine protein kinase YP_002419374.1 PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: mrd:Mrad2831_5230 anti-sigma-factor antagonist YP_002419375.1 PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: mrd:Mrad2831_5229 anti-sigma-factor antagonist YP_002419376.1 KEGG: mrd:Mrad2831_5546 hypothetical protein YP_002419377.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: mpo:Mpop_3728 signal transduction histidine kinase YP_002419378.1 PFAM: response regulator receiver; KEGG: mpo:Mpop_0095 response regulator receiver protein YP_002419379.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: mpo:Mpop_0171 multi-sensor hybrid histidine kinase YP_002419380.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mpo:Mpop_0175 diguanylate cyclase YP_002419381.1 KEGG: mpo:Mpop_0176 hypothetical protein YP_002419382.1 KEGG: mex:Mext_1918 hypothetical protein YP_002419383.1 PFAM: inorganic pyrophosphatase; KEGG: bid:Bind_2987 inorganic pyrophosphatase YP_002419384.1 KEGG: met:M446_1189 hypothetical protein YP_002419385.1 PFAM: EAL domain protein; KEGG: mex:Mext_3242 EAL domain-containing protein YP_002419386.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; KEGG: mex:Mext_0113 PAS sensor protein YP_002419387.1 PFAM: BLUF domain protein; KEGG: mex:Mext_0114 BLUF domain-containing protein YP_002419388.1 PFAM: response regulator receiver; KEGG: mpo:Mpop_3155 response regulator receiver protein YP_002419389.1 KEGG: mex:Mext_1129 hypothetical protein YP_002419390.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; PAS fold-4 domain protein; KEGG: mpo:Mpop_0141 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) YP_002419391.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: met:M446_0110 alcohol dehydrogenase YP_002419392.1 KEGG: met:M446_0111 hypothetical protein YP_002419393.1 KEGG: met:M446_0112 hypothetical protein YP_002419394.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mfa:Mfla_0397 AraC family transcriptional regulator YP_002419395.1 KEGG: mpo:Mpop_4442 hypothetical protein YP_002419396.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mpo:Mpop_2952 MucR family transcriptional regulator YP_002419397.1 KEGG: mpo:Mpop_3896 hypothetical protein YP_002419398.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mex:Mext_3509 metal-dependent phosphohydrolase YP_002419399.1 KEGG: mpo:Mpop_0149 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002419400.1 PFAM: TadE family protein; KEGG: mrd:Mrad2831_2082 TadE family protein YP_002419401.1 PFAM: TadE family protein; KEGG: mrd:Mrad2831_2083 TadE family protein YP_002419402.1 KEGG: pzu:PHZ_c1612 hypothetical protein YP_002419403.1 PFAM: protein of unknown function DUF159; KEGG: mex:Mext_3586 hypothetical protein YP_002419405.1 KEGG: mex:Mext_1866 hypothetical protein YP_002419407.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: mpo:Mpop_2198 transcriptional regulator, XRE family YP_002419408.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: gka:GK2787 thiol peroxidase (superoxide-inducible protein 8) YP_002419409.1 KEGG: mex:Mext_2100 hypothetical protein YP_002419410.1 TIGRFAM: ferredoxin-type protein, NapH/MauN family; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pde:Pden_4738 ferredoxin-type protein, NapH/MauN family YP_002419411.1 TIGRFAM: MauM/NapG family ferredoxin-type protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pde:Pden_4737 MauM/NapG family ferredoxin-type protein YP_002419412.1 KEGG: mfa:Mfla_0553 hypothetical protein YP_002419413.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: mfa:Mfla_0552 cytochrome-c peroxidase YP_002419414.1 KEGG: pde:Pden_4735 hypothetical protein YP_002419415.1 TIGRFAM: amicyanin; PFAM: blue (type 1) copper domain protein; KEGG: pde:Pden_4734 amicyanin YP_002419416.1 KEGG: pde:Pden_4733 methylamine dehydrogenase light chain; TIGRFAM: methylamine dehydrogenase light chain; PFAM: methylamine dehydrogenase light chain domain protein YP_002419417.1 TIGRFAM: methylamine dehydrogenase accessory protein MauD; PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: pde:Pden_4732 methylamine dehydrogenase accessory protein MauD YP_002419418.1 PFAM: methylamine utilisation MauE; KEGG: pde:Pden_4731 methylamine utilisation MauE YP_002419419.1 KEGG: pde:Pden_4730 methylamine dehydrogenase heavy chain; TIGRFAM: methylamine dehydrogenase heavy chain; PFAM: methylamine dehydrogenase heavy subunit YP_002419420.1 KEGG: pde:Pden_4729 hypothetical protein YP_002419421.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mrd:Mrad2831_5661 TonB-dependent receptor YP_002419422.1 PFAM: PepSY-associated TM helix domain protein; KEGG: mrd:Mrad2831_5663 PepSY-associated TM helix domain-containing protein YP_002419423.1 KEGG: mpo:Mpop_3046 hypothetical protein YP_002419425.1 KEGG: rec:RHECIAT_PA0000344 hypothetical protein YP_002419426.1 KEGG: rec:RHECIAT_PA0000344 hypothetical protein YP_002419427.1 KEGG: mrd:Mrad2831_5316 hypothetical protein YP_002419428.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: mex:Mext_0569 ABC transporter YP_002419429.1 PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_0570 extracellular solute-binding protein YP_002419430.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_0571 binding-protein-dependent transport systems inner membrane component YP_002419431.1 KEGG: mpo:Mpop_0545 hypothetical protein YP_002419432.1 KEGG: mex:Mext_0572 hypothetical protein YP_002419433.1 PFAM: protein of unknown function DUF540; KEGG: mex:Mext_0573 hypothetical protein YP_002419434.1 PFAM: hypothetical protein; Kelch repeat protein; KEGG: mex:Mext_0574 kelch repeat-containing protein YP_002419435.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_0575 amine oxidase YP_002419436.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_0576 cyclic nucleotide-binding YP_002419437.1 PFAM: cupin; KEGG: mex:Mext_0577 cupin 2 domain-containing protein YP_002419438.1 KEGG: mpo:Mpop_0552 hypothetical protein YP_002419439.1 KEGG: mpo:Mpop_0553 hypothetical protein YP_002419440.1 KEGG: mex:Mext_0579 hypothetical protein YP_002419441.1 KEGG: mpo:Mpop_0555 hypothetical protein YP_002419442.1 TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_0581 sulfate ABC transporter periplasmic sulfate-binding protein YP_002419443.1 TIGRFAM: sulfate ABC transporter inner membrane subunit; sulfate ABC transporter inner membrane subunit CysT; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_0582 sulfate ABC transporter inner membrane subunit CysT YP_002419444.1 TIGRFAM: sulfate ABC transporter inner membrane subunit; sulfate ABC transporter inner membrane subunit CysW; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_0583 sulfate ABC transporter inner membrane subunit CysW YP_002419445.1 KEGG: mex:Mext_0584 sulfate ABC transporter ATPase subunit; TIGRFAM: sulfate ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_002419446.1 KEGG: mex:Mext_0585 hypothetical protein YP_002419447.1 KEGG: mex:Mext_0586 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; endonuclease III/Nth YP_002419448.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_002419449.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0588 glycosyl transferase YP_002419450.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0589 glycosyl transferase YP_002419451.1 KEGG: mex:Mext_0590 hypothetical protein YP_002419452.1 PFAM: invasion associated locus B family protein; KEGG: mex:Mext_0591 invasion associated locus B family protein YP_002419453.1 KEGG: mex:Mext_0592 hypothetical protein YP_002419454.1 PFAM: protein of unknown function DUF45; KEGG: mex:Mext_0593 hypothetical protein YP_002419455.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mex:Mext_0594 polyhydroxyalkanoate depolymerase, intracellular YP_002419456.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0595 ATPase domain-containing protein YP_002419457.1 PFAM: response regulator receiver; KEGG: mex:Mext_0596 response regulator receiver YP_002419458.1 KEGG: mex:Mext_0597 hypothetical protein YP_002419459.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: mex:Mext_0598 phosphoribosylformylglycinamidine synthase, PurS YP_002419460.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_002419461.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_002419462.1 PFAM: inositol monophosphatase; KEGG: mex:Mext_0601 inositol-phosphate phosphatase YP_002419463.1 PFAM: thiamine monophosphate synthase; KEGG: mex:Mext_0602 thiamine monophosphate synthase YP_002419464.1 PFAM: thiazole biosynthesis protein; KEGG: mex:Mext_0603 thiazole biosynthesis protein YP_002419465.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: mex:Mext_0604 thiamine biosynthesis protein ThiS YP_002419466.1 TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: mex:Mext_0605 glycine oxidase ThiO YP_002419467.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_0606 adenylyl cyclase class-3/4/guanylyl cyclase YP_002419468.1 KEGG: mex:Mext_0607 hypothetical protein YP_002419469.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_0608 helix-turn-helix domain-containing protein YP_002419470.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_0609 major facilitator transporter YP_002419471.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria YP_002419472.1 synthesizes RNA primers at the replication forks YP_002419473.1 PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: mex:Mext_0612 gluconolactonase YP_002419474.1 PFAM: major royal jelly protein; KEGG: mex:Mext_0613 hypothetical protein YP_002419475.1 KEGG: mex:Mext_0614 GatB/YqeY YP_002419476.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; carbamoyl-phosphate synthase small chain; KEGG: mex:Mext_0615 carbamoyl-phosphate synthase, small subunit YP_002419477.1 KEGG: mex:Mext_0616 hypothetical protein YP_002419478.1 KEGG: mex:Mext_0617 hypothetical protein YP_002419479.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella YP_002419480.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella YP_002419481.1 PFAM: flagellar hook-basal body complex protein FliE; KEGG: mex:Mext_0620 flagellar hook-basal body complex protein FliE YP_002419482.1 makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella YP_002419483.1 TIGRFAM: flagella basal body P-ring formation protein FlgA; KEGG: mex:Mext_0622 FlgA, flagellar basal-body P-ring formation protein YP_002419484.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella YP_002419485.1 KEGG: mex:Mext_0624 hypothetical protein YP_002419486.1 PFAM: flagellar L-ring protein; KEGG: mex:Mext_0625 flagellar L-ring protein YP_002419487.1 PFAM: flagellar basal body-associated protein FliL; KEGG: mex:Mext_0626 flagellar basal body-associated protein FliL YP_002419488.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagellum YP_002419489.1 KEGG: mex:Mext_0628 hypothetical protein YP_002419490.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod YP_002419491.1 KEGG: mex:Mext_0630 hypothetical protein YP_002419492.1 PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_0631 OmpA/MotB domain-containing protein YP_002419493.1 a periplasmic protein that interacts with and stabilizes MotB; in Rhizobium, interactions between MotB and MotC at the periplasmic surface of the motor control the energy flux or the energy coupling that drives flagellar rotation YP_002419494.1 KEGG: mex:Mext_0633 hypothetical protein YP_002419495.1 PFAM: lytic transglycosylase catalytic; KEGG: mex:Mext_0634 lytic transglycosylase catalytic YP_002419496.1 PFAM: transcriptional regulator; KEGG: mex:Mext_0635 transcriptional regulator domain-containing protein YP_002419497.1 KEGG: mex:Mext_0636 hypothetical protein YP_002419498.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella YP_002419499.1 PFAM: flagellar motor switch protein FliG; KEGG: mex:Mext_0638 flagellar motor switch protein FliG YP_002419500.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: mex:Mext_0639 flagellar motor switch protein FliN YP_002419501.1 KEGG: mex:Mext_0640 hypothetical protein YP_002419502.1 KEGG: mex:Mext_0641 hypothetical protein YP_002419503.1 PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: mex:Mext_0642 flagellar motor switch protein FliM YP_002419504.1 KEGG: mex:Mext_0643 chemotaxis MotA protein YP_002419505.1 heat shock protein involved in degradation of misfolded proteins YP_002419506.1 heat shock protein involved in degradation of misfolded proteins YP_002419507.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_0646 hypothetical protein YP_002419508.1 KEGG: mex:Mext_0647 hypothetical protein YP_002419509.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mex:Mext_0648 Rieske (2Fe-2S) domain-containing protein YP_002419510.1 KEGG: mex:Mext_0649 hypothetical protein YP_002419511.1 KEGG: mex:Mext_0650 hypothetical protein YP_002419512.1 KEGG: mex:Mext_0651 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA YP_002419513.1 TIGRFAM: chorismate mutase; PFAM: chorismate mutase; KEGG: mex:Mext_0652 chorismate mutase YP_002419514.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_002419515.1 Essential for efficient processing of 16S rRNA YP_002419516.1 KEGG: mex:Mext_0655 hypothetical protein YP_002419517.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_0656 methyltransferase type 11 YP_002419518.1 KEGG: mex:Mext_0657 hypothetical protein YP_002419519.1 KEGG: mex:Mext_0658 tRNA (guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_002419520.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate YP_002419522.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_002419523.1 PFAM: Domain of unknown function DUF1902; KEGG: mex:Mext_0661 hypothetical protein YP_002419524.1 KEGG: mex:Mext_0662 aIF-2BI family translation initiation factor; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related YP_002419525.1 KEGG: mex:Mext_0663 DNA-binding protein YP_002419526.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mex:Mext_0664 MATE efflux family protein YP_002419527.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_0665 ABC transporter YP_002419528.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mex:Mext_0666 tRNA/rRNA methyltransferase (SpoU) YP_002419529.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0667 chemotaxis sensory transducer YP_002419530.1 PFAM: PspA/IM30 family protein; KEGG: mex:Mext_0668 PspA/IM30 family protein YP_002419531.1 PFAM: protein of unknown function DUF1449; KEGG: mex:Mext_0669 hypothetical protein YP_002419532.1 PFAM: band 7 protein; KEGG: rec:RHECIAT_CH0003358 hypothetical protein YP_002419533.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_0672 TonB-dependent siderophore receptor YP_002419534.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis YP_002419535.1 KEGG: mex:Mext_0674 deoxyribonuclease YP_002419536.1 KEGG: mex:Mext_0675 aspartate aminotransferase YP_002419537.1 PFAM: transcriptional regulator; KEGG: mex:Mext_0676 transcriptional regulator domain-containing protein YP_002419538.1 PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_0678 type IV pilus assembly PilZ YP_002419539.1 KEGG: mex:Mext_0679 hypothetical protein YP_002419540.1 PFAM: protein of unknown function DUF1217; KEGG: mex:Mext_0680 hypothetical protein YP_002419541.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mex:Mext_0681 flagellar basal body rod protein YP_002419542.1 involved in type III protein export during flagellum assembly YP_002419543.1 the hook connects flagellar basal body to the flagellar filament YP_002419544.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook YP_002419545.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella YP_002419546.1 acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella YP_002419547.1 post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella YP_002419548.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella YP_002419549.1 FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum YP_002419550.1 membrane protein involved in the flagellar export apparatus YP_002419551.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium has one thick and several thin flagella; the Bradyrhizobium protein in this cluster are associated with the thin flagella YP_002419552.1 KEGG: mex:Mext_0692 hypothetical protein YP_002419553.1 KEGG: mex:Mext_0693 hypothetical protein YP_002419554.1 KEGG: mex:Mext_0694 hypothetical protein YP_002419555.1 KEGG: mex:Mext_0695 hypothetical protein YP_002419556.1 PFAM: dihydrodipicolinate synthetase; KEGG: mex:Mext_0696 dihydrodipicolinate synthetase YP_002419557.1 KEGG: mex:Mext_0697 hypothetical protein YP_002419558.1 PFAM: protein of unknown function DUF1491; KEGG: mex:Mext_0698 hypothetical protein YP_002419559.1 PFAM: peptidoglycan-binding protein; KEGG: mex:Mext_0699 peptidoglycan binding domain-containing protein YP_002419560.1 KEGG: mex:Mext_0700 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; SMART: PAS domain containing protein YP_002419561.1 KEGG: mex:Mext_0701 hypothetical protein YP_002419562.1 TIGRFAM: cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: mex:Mext_0702 cytochrome d ubiquinol oxidase subunit II YP_002419563.1 KEGG: mpo:Mpop_0676 hypothetical protein YP_002419565.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_0703 major facilitator transporter YP_002419566.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_0704 major facilitator transporter YP_002419567.1 PFAM: helix-turn-helix HxlR type; KEGG: mex:Mext_0705 helix-turn-helix HxlR type YP_002419568.1 KEGG: mex:Mext_0706 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_002419569.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0707 chemotaxis sensory transducer YP_002419570.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile YP_002419571.1 PFAM: protein of unknown function UPF0066; KEGG: mex:Mext_0709 hypothetical protein YP_002419572.1 KEGG: mex:Mext_0710 cellulose biosynthesis protein CelD YP_002419573.1 PFAM: protein of unknown function DUF201; KEGG: mex:Mext_0711 hypothetical protein YP_002419574.1 PFAM: protein of unknown function DUF1810; KEGG: mex:Mext_0712 hypothetical protein YP_002419575.1 PFAM: histone deacetylase superfamily; KEGG: mex:Mext_0713 histone deacetylase superfamily protein YP_002419576.1 KEGG: mex:Mext_0714 ceramide glucosyltransferase YP_002419577.1 KEGG: mex:Mext_0715 chromosome segregation ATPase-like protein YP_002419578.1 KEGG: mex:Mext_0716 hypothetical protein YP_002419579.1 KEGG: mex:Mext_0717 hypothetical protein YP_002419580.1 TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: mex:Mext_0718 ethanolamine transproter YP_002419581.1 PFAM: fatty acid desaturase; KEGG: mex:Mext_0719 fatty acid desaturase YP_002419582.1 PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: mex:Mext_0720 regulatory protein ArsR YP_002419583.1 PFAM: glutamine amidotransferase class-I; KEGG: mex:Mext_0721 glutamine amidotransferase class-I YP_002419584.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_0722 aldo/keto reductase YP_002419585.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator; KEGG: mex:Mext_0723 AraC-like transcriptional regulator YP_002419586.1 KEGG: mex:Mext_0725 DedA family protein YP_002419587.1 PFAM: disulfide bond formation protein DsbB; KEGG: mex:Mext_0726 disulphide bond formation protein DsbB YP_002419588.1 PFAM: ParB-like nuclease; KEGG: mex:Mext_0727 ParB-like nuclease YP_002419589.1 PFAM: acyltransferase 3; KEGG: mex:Mext_0728 acyltransferase 3 YP_002419590.1 PFAM: protein of unknown function DUF55; KEGG: mex:Mext_0729 hypothetical protein YP_002419591.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_002419592.1 KEGG: mex:Mext_0731 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; hypothetical protein; SMART: PAC repeat-containing protein YP_002419593.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_002419594.1 KEGG: mex:Mext_0733 uroporphyrinogen III synthase HEM4 YP_002419595.1 KEGG: mex:Mext_0734 hypothetical protein YP_002419596.1 PFAM: HemY domain protein; KEGG: mex:Mext_0735 HemY domain-containing protein YP_002419597.1 KEGG: mex:Mext_0807 hypothetical protein YP_002419598.1 KEGG: mex:Mext_0808 hypothetical protein YP_002419599.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0809 chemotaxis sensory transducer YP_002419600.1 KEGG: mex:Mext_0810 hypothetical protein YP_002419601.1 PFAM: helicase; KEGG: mex:Mext_0811 helicase domain-containing protein YP_002419602.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: mex:Mext_1007 NADH dehydrogenase YP_002419603.1 KEGG: mex:Mext_1008 hypothetical protein YP_002419604.1 PFAM: proton/sugar symporter LacY; major facilitator superfamily MFS_1; KEGG: mex:Mext_1009 major facilitator transporter YP_002419605.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity YP_002419606.1 KEGG: mex:Mext_1011 hypothetical protein YP_002419607.1 KEGG: mex:Mext_1012 hypothetical protein YP_002419608.1 KEGG: mex:Mext_1013 hypothetical protein YP_002419609.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1014 short-chain dehydrogenase/reductase SDR YP_002419610.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1015 isochorismatase hydrolase YP_002419611.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_1016 alcohol dehydrogenase YP_002419612.1 KEGG: mex:Mext_1017 hypothetical protein YP_002419613.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1018 short-chain dehydrogenase/reductase SDR YP_002419614.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1019 short-chain dehydrogenase/reductase SDR YP_002419615.1 KEGG: mex:Mext_1020 hypothetical protein YP_002419616.1 PFAM: ABC transporter; KEGG: mex:Mext_1021 hypothetical protein YP_002419617.1 KEGG: mex:Mext_1022 hypothetical protein YP_002419618.1 KEGG:. YP_002419619.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: mex:Mext_0813 RNA-binding S1 domain-containing protein YP_002419620.1 KEGG: mex:Mext_0814 hypothetical protein YP_002419621.1 PFAM: ABC transporter; KEGG: mex:Mext_0815 ABC transporter related YP_002419622.1 KEGG: mex:Mext_0816 capsule polysaccharide export protein-like protein YP_002419623.1 KEGG: mex:Mext_0817 hypothetical protein YP_002419624.1 KEGG: mex:Mext_0818 hypothetical protein YP_002419625.1 membrane protein involved in the flagellar export apparatus YP_002419626.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: mex:Mext_0820 chemotaxis sensory transducer YP_002419627.1 KEGG: mpo:Mpop_0742 hypothetical protein YP_002419628.1 KEGG: mex:Mext_0821 hypothetical protein YP_002419629.1 TIGRFAM: flagellar export protein FliJ; KEGG: mex:Mext_0822 flagellar export protein FliJ YP_002419630.1 involved in type III protein export during flagellum assembly YP_002419631.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0824 response regulator receiver YP_002419632.1 KEGG: mex:Mext_0825 hypothetical protein YP_002419633.1 KEGG: mex:Mext_0826 chloramphenicol acetyltransferase YP_002419634.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate YP_002419635.1 PFAM: acetamidase/formamidase; KEGG: mex:Mext_0828 acetamidase/formamidase YP_002419636.1 KEGG: mex:Mext_0829 hypothetical protein YP_002419637.1 KEGG: mex:Mext_0830 hypothetical protein YP_002419638.1 PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: mex:Mext_0831 glycosyl transferase YP_002419639.1 KEGG: mex:Mext_0832 hypothetical protein YP_002419640.1 KEGG: mex:Mext_0833 hypothetical protein YP_002419641.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mex:Mext_0834 hypothetical protein YP_002419642.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_0835 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_002419643.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mex:Mext_0836 molybdopterin dehydrogenase FAD-binding YP_002419644.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_0837 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_002419645.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: mpo:Mpop_0761 CrcB protein YP_002419646.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_0839 hypothetical protein YP_002419647.1 PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: mex:Mext_0840 peptidase M15D VanX D-ala-D-ala dipeptidase YP_002419648.1 KEGG: mex:Mext_0841 hypothetical protein YP_002419649.1 KEGG: mex:Mext_0842 hypothetical protein YP_002419650.1 PFAM: regulatory protein MarR; KEGG: mex:Mext_0844 regulatory protein MarR YP_002419651.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0845 glycosyl transferase YP_002419652.1 TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: nucleotidyl transferase; KEGG: mex:Mext_0846 glucose-1-phosphate cytidylyltransferase YP_002419653.1 TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: mex:Mext_0847 CDP-glucose 4,6-dehydratase YP_002419654.1 PFAM: methyltransferase type 11; methyltransferase type 12; methyltransferase domain protein; C-methyltransferase; KEGG: mex:Mext_0848 C-methyltransferase YP_002419655.1 PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: mex:Mext_0849 dTDP-4-dehydrorhamnose 3,5-epimerase YP_002419656.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mex:Mext_0850 NAD-dependent epimerase/dehydratase YP_002419657.1 PFAM: response regulator receiver; KEGG: mex:Mext_0851 response regulator receiver YP_002419658.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: mex:Mext_0852 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_002419659.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine YP_002419660.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor YP_002419661.1 TIGRFAM: glycine cleavage system protein T; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel; KEGG: mex:Mext_0855 glycine cleavage system protein T YP_002419662.1 KEGG: mex:Mext_0856 hypothetical protein YP_002419663.1 KEGG: mex:Mext_0857 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class V; aminotransferase class I and II YP_002419664.1 PFAM: NLP/P60 protein; KEGG: mex:Mext_0858 NLP/P60 protein YP_002419665.1 KEGG: mex:Mext_0859 hypothetical protein YP_002419666.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_0860 short-chain dehydrogenase/reductase SDR YP_002419667.1 PFAM: MgtC/SapB transporter; KEGG: mex:Mext_0861 MgtC/SapB transporter YP_002419668.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase AAA; KEGG: mex:Mext_0862 ATPase YP_002419669.1 KEGG: mex:Mext_0863 hypothetical protein YP_002419670.1 KEGG: mex:Mext_0864 hypothetical protein YP_002419671.1 PFAM: von Willebrand factor type A; KEGG: mex:Mext_0865 von Willebrand factor type A YP_002419672.1 PFAM: von Willebrand factor type A; KEGG: mex:Mext_0866 von Willebrand factor type A YP_002419673.1 PFAM: hypotheticalprotein; Tetratricopeptide TPR_2 repeat protein; KEGG: mex:Mext_0867 hypotheticalprotein YP_002419674.1 KEGG: mex:Mext_0868 hypothetical protein YP_002419675.1 KEGG: mex:Mext_0869 hypothetical protein YP_002419676.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_0870 hypothetical protein YP_002419677.1 KEGG: mex:Mext_0871 hypothetical protein YP_002419678.1 KEGG: mex:Mext_0872 hypothetical protein YP_002419679.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: methionine sulfoxide reductase B; KEGG: mex:Mext_0873 methionine-R-sulfoxide reductase YP_002419680.1 PFAM: ribonuclease BN; KEGG: mex:Mext_0874 ribonuclease BN YP_002419681.1 KEGG: mex:Mext_0875 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002419682.1 catalyzes the formation of malonyl-CoA from malonate and CoA YP_002419683.1 KEGG: mex:Mext_0877 hypothetical protein YP_002419684.1 PFAM: Collagen triple helix repeat; KEGG: mex:Mext_0878 triple helix repeat-containing collagen YP_002419685.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; KEGG: mex:Mext_0879 hypothetical protein YP_002419686.1 PFAM: integral membrane protein TerC; KEGG: mex:Mext_0880 integral membrane protein TerC YP_002419687.1 KEGG: mex:Mext_0881 hypothetical protein YP_002419688.1 TIGRFAM: intracellular protease PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_0882 PfpI family intracellular peptidase YP_002419689.1 KEGG: mex:Mext_0883 hypothetical protein YP_002419690.1 KEGG: mex:Mext_0884 hypothetical protein YP_002419691.1 KEGG: mex:Mext_0885 hypothetical protein YP_002419692.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_0886 cold-shock protein DNA-binding YP_002419693.1 KEGG: mex:Mext_0887 hypothetical protein YP_002419694.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_0888 hypothetical protein YP_002419695.1 KEGG: mex:Mext_0889 hypothetical protein YP_002419696.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_0890 major facilitator transporter YP_002419697.1 PFAM: protein of unknown function DUF140; KEGG: mex:Mext_0891 hypothetical protein YP_002419698.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_0892 ABC transporter YP_002419699.1 PFAM: hypothetical protein; KEGG: mex:Mext_0893 hypothetical protein YP_002419700.1 PFAM: protein of unknown function DUF330; KEGG: mex:Mext_0894 hypothetical protein YP_002419701.1 PFAM: inositol monophosphatase; KEGG: mex:Mext_0895 inositol monophosphatase YP_002419702.1 KEGG: mex:Mext_0896 hypothetical protein YP_002419703.1 TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: mex:Mext_0897 4-hydroxybenzoate polyprenyl transferase YP_002419704.1 KEGG: mex:Mext_0898 signal peptide YP_002419705.1 PFAM: protein of unknown function DUF558; KEGG: mex:Mext_0899 hypothetical protein YP_002419706.1 PFAM: asparaginase/glutaminase; KEGG: mex:Mext_0900 asparaginase/glutaminase YP_002419707.1 KEGG: mex:Mext_0901 glutamate--cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase YP_002419708.1 KEGG: mex:Mext_0902 hypothetical protein YP_002419709.1 PFAM: SirA family protein; KEGG: mex:Mext_0903 SirA family protein YP_002419710.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_0904 NUDIX hydrolase YP_002419711.1 KEGG: mpo:Mpop_0833 hypothetical protein YP_002419712.1 KEGG: mex:Mext_0905 hypothetical protein YP_002419713.1 KEGG: mex:Mext_0906 hypothetical protein YP_002419714.1 KEGG: mex:Mext_0907 transmembrane signal peptide protein YP_002419715.1 PFAM: protein of unknown function DUF1289; KEGG: mex:Mext_0908 hypothetical protein YP_002419716.1 KEGG: mex:Mext_0909 hypothetical protein YP_002419717.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: mex:Mext_0910 cobalamin 5'-phosphate synthase YP_002419718.1 KEGG: mex:Mext_0911 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_002419719.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0912 ATPase domain-containing protein YP_002419720.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_0913 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_002419721.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_0914 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_002419722.1 KEGG: mex:Mext_0915 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002419723.1 PFAM: amidase; KEGG: mex:Mext_0916 amidase YP_002419724.1 PFAM: Extensin family protein; KEGG: mex:Mext_0917 extensin family protein YP_002419725.1 KEGG: mex:Mext_0918 hypothetical protein YP_002419726.1 PFAM: ribonuclease T2; KEGG: mex:Mext_0919 ribonuclease T2 YP_002419727.1 PFAM: protein of unknown function DUF519; KEGG: mex:Mext_0920 hypothetical protein YP_002419728.1 KEGG: mex:Mext_0921 hypothetical protein YP_002419729.1 KEGG: mex:Mext_0922 hypothetical protein YP_002419730.1 PFAM: FAD linked oxidase; KEGG: mex:Mext_0923 FAD linked oxidase domain-containing protein YP_002419731.1 PFAM: cytochrome C class I; KEGG: mex:Mext_0924 cytochrome c class I YP_002419732.1 PFAM: regulatory protein MarR; KEGG: mex:Mext_0925 regulatory protein MarR YP_002419733.1 KEGG: mex:Mext_0926 hypothetical protein YP_002419734.1 PFAM: protein of unknown function DUF1214; KEGG: mex:Mext_0927 hypothetical protein YP_002419735.1 KEGG: mex:Mext_0928 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_002419736.1 PFAM: protein of unknown function UPF0153; KEGG: mex:Mext_0929 hypothetical protein YP_002419737.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_0930 GCN5-related N-acetyltransferase YP_002419738.1 PFAM: TadE family protein; KEGG: mex:Mext_0931 TadE family protein YP_002419739.1 KEGG: mex:Mext_0932 hypothetical protein YP_002419740.1 KEGG: mex:Mext_0933 hypothetical protein YP_002419741.1 PFAM: AFG1-family ATPase; KEGG: mex:Mext_0934 AFG1 family ATPase YP_002419742.1 TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: mex:Mext_0935 DNA-3-methyladenine glycosylase YP_002419743.1 PFAM: ribonuclease H; KEGG: mex:Mext_0936 ribonuclease H YP_002419744.1 KEGG: mex:Mext_0937 hypothetical protein YP_002419745.1 KEGG: mpo:Mpop_0874 hypothetical protein YP_002419746.1 KEGG: mex:Mext_0938 hypothetical protein YP_002419747.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione YP_002419748.1 KEGG: mpo:Mpop_0877 hypothetical protein YP_002419749.1 PFAM: sodium/hydrogen exchanger; KEGG: mex:Mext_0940 sodium/hydrogen exchanger YP_002419750.1 PFAM: peptidoglycan-binding protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: mex:Mext_0941 N-acetylmuramoyl-L-alanine amidase YP_002419751.1 PFAM: heat shock protein DnaJ domain protein; protein of unknown function DUF1332; KEGG: mex:Mext_0942 heat shock protein DnaJ domain-containing protein YP_002419752.1 KEGG: mpo:Mpop_0881 hypothetical protein YP_002419753.1 KEGG: mpo:Mpop_0883 hypothetical protein YP_002419754.1 KEGG: mpo:Mpop_0884 hypothetical protein YP_002419755.1 PFAM: dihydrouridine synthase; KEGG: mex:Mext_0946 tRNA-dihydrouridine synthase A YP_002419756.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_0947 diguanylate cyclase YP_002419757.1 PFAM: response regulator receiver; KEGG: mex:Mext_0948 response regulator receiver YP_002419758.1 PFAM: BLUF domain protein; KEGG: mex:Mext_0949 BLUF domain-containing protein YP_002419759.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: mex:Mext_0950 hypothetical protein YP_002419760.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: mex:Mext_0951 flagellar hook-associated protein FlgK YP_002419761.1 KEGG: mex:Mext_0952 hypothetical protein YP_002419762.1 KEGG: mex:Mext_0953 hypothetical protein YP_002419763.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: mex:Mext_0954 protein-(glutamine-N5) methyltransferase, release factor-specific YP_002419764.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 YP_002419765.1 KEGG: mex:Mext_0956 hypothetical protein YP_002419766.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: mex:Mext_0957 phosphoenolpyruvate-protein phosphotransferase YP_002419767.1 KEGG: mex:Mext_0958 aspartate kinase; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_002419768.1 KEGG: mex:Mext_0959 ubiquinone biosynthesis O-methyltransferase; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: methyltransferase type 11; methyltransferase type 12 YP_002419769.1 PFAM: PEBP family protein; KEGG: mex:Mext_0960 PEBP family protein YP_002419770.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_0961 alcohol dehydrogenase YP_002419771.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity YP_002419772.1 PFAM: YceI family protein; KEGG: mex:Mext_0963 YceI family protein YP_002419773.1 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_002419774.1 KEGG: mex:Mext_0965 hypothetical protein YP_002419775.1 PFAM: response regulator receiver; KEGG: mpo:Mpop_0906 response regulator receiver protein YP_002419776.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: mex:Mext_0967 diguanylate cyclase YP_002419777.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mex:Mext_0968 rrf2 family transcriptional regulator YP_002419778.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine YP_002419779.1 KEGG: mex:Mext_0970 hypothetical protein YP_002419780.1 KEGG: mex:Mext_0971 hypothetical protein YP_002419781.1 KEGG: mex:Mext_0972 hypothetical protein YP_002419782.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: mex:Mext_0973 cysteine synthase A YP_002419783.1 KEGG: mex:Mext_0974 hypothetical protein YP_002419784.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: mex:Mext_0975 protein of unknown function DUF306 MetA and HslJ YP_002419785.1 KEGG: mex:Mext_0976 hypothetical protein YP_002419786.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_0977 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002419787.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_0978 LysR substrate-binding YP_002419788.1 PFAM: inositol phosphatase/fructose-16-bisphosphatase; KEGG: mex:Mext_0979 inositol phosphatase/fructose-16-bisphosphatase YP_002419789.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: mex:Mext_0980 phosphoribulokinase YP_002419790.1 KEGG: mex:Mext_0981 hypothetical protein YP_002419791.1 PFAM: protein of unknown function DUF28; KEGG: mex:Mext_0982 hypothetical protein YP_002419792.1 KEGG: mex:Mext_0984 beta-lactamase-like protein YP_002419793.1 KEGG: mex:Mext_0985 hypothetical protein YP_002419794.1 KEGG: mex:Mext_0986 hypothetical protein YP_002419795.1 PFAM: polysaccharide biosynthesis protein; KEGG: mex:Mext_0987 polysaccharide biosynthesis protein YP_002419796.1 KEGG: mex:Mext_0988 hypothetical protein YP_002419797.1 KEGG: mex:Mext_0989 OpgC protein YP_002419798.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: mex:Mext_0990 HAD family hydrolase YP_002419799.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: mex:Mext_0991 ribulose-phosphate 3-epimerase YP_002419800.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpo:Mpop_0933 GCN5-related N-acetyltransferase YP_002419801.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: mex:Mext_0993 ornithine decarboxylase YP_002419802.1 TIGRFAM: TonB family protein; KEGG: mex:Mext_0994 TonB family protein YP_002419803.1 TIGRFAM: molybdenum cofactor synthesis protein; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: mex:Mext_0995 molybdenum cofactor biosynthesis protein B YP_002419804.1 TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: mex:Mext_0996 adenylosuccinate lyase YP_002419805.1 PFAM: aminotransferase class IV; KEGG: mex:Mext_0997 aminotransferase class IV YP_002419806.1 KEGG: mex:Mext_0998 hypothetical protein YP_002419807.1 PFAM: adenylosuccinate synthetase; KEGG: mex:Mext_0999 adenylosuccinate synthase YP_002419808.1 KEGG: mex:Mext_1000 hypothetical protein YP_002419809.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters YP_002419810.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_1002 diguanylate cyclase YP_002419811.1 KEGG: mex:Mext_1003 hypothetical protein YP_002419812.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_1004 GCN5-related N-acetyltransferase YP_002419813.1 KEGG: mex:Mext_1005 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase YP_002419814.1 PFAM: integrase family protein; KEGG: nwi:Nwi_0275 phage integrase YP_002419815.1 PFAM: integrase family protein; KEGG: nwi:Nwi_0275 phage integrase YP_002419816.1 KEGG: dsh:Dshi_0989 hypothetical protein YP_002419817.1 PFAM: helix-turn-helix domain protein; KEGG: gbe:GbCGDNIH1_1593 transcriptional repressor YP_002419818.1 KEGG: LOC100075123; similar to splicing coactivator subunit SRm300 YP_002419819.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mrd:Mrad2831_4099 TonB-dependent siderophore receptor YP_002419820.1 PFAM: esterase; KEGG: azc:AZC_3250 esterase YP_002419822.1 KEGG: mpo:Mpop_3836 hypothetical protein YP_002419823.1 PFAM: Resolvase domain; Recombinase; KEGG: mpo:Mpop_3843 resolvase domain YP_002419824.1 PFAM: Resolvase domain; KEGG: mpo:Mpop_3842 resolvase domain YP_002419826.1 KEGG: mrd:Mrad2831_5193 metallophosphoesterase YP_002419827.1 PFAM: helix-turn-helix domain protein; KEGG: pde:Pden_3837 helix-turn-helix domain protein YP_002419828.1 KEGG: mpo:Mpop_3836 hypothetical protein YP_002419829.1 PFAM: peptidase M41; ATPase AAA central domain protein; SMART: ATPase AAA; KEGG: mpo:Mpop_3837 ATPase AAA central domain protein YP_002419830.1 KEGG: mpo:Mpop_3838 hypothetical protein YP_002419832.1 KEGG: art:Arth_0448 hypothetical protein YP_002419833.1 KEGG: mrd:Mrad2831_2532 hypothetical protein YP_002419834.1 TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: met:M446_0182 RND family efflux transporter MFP subunit YP_002419835.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: met:M446_0181 CzcA family heavy metal efflux protein YP_002419836.1 KEGG: mrd:Mrad2831_2535 hypothetical protein YP_002419837.1 PFAM: protein of unknown function DUF305; KEGG: met:M446_0179 hypothetical protein YP_002419838.1 KEGG: mpo:Mpop_0107 hypothetical protein YP_002419839.1 KEGG: mpo:Mpop_4128 hypothetical protein YP_002419840.1 KEGG: met:M446_0177 heavy metal translocating P-type ATPase; TIGRFAM: ATPase P; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein YP_002419841.1 KEGG: mpo:Mpop_0104 hypothetical protein YP_002419842.1 PFAM: protein of unknown function DUF411; KEGG: mpo:Mpop_4113 protein of unknown function DUF411 YP_002419843.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mrd:Mrad2831_4063 TonB-dependent receptor plug YP_002419845.1 KEGG: mpo:Mpop_4115 hypothetical protein YP_002419846.1 PFAM: protein of unknown function DUF156; KEGG: mpo:Mpop_2536 protein of unknown function DUF156 YP_002419847.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mpo:Mpop_2540 heavy metal transport/detoxification protein YP_002419848.1 KEGG: mpo:Mpop_2541 hypothetical protein YP_002419849.1 PFAM: Hemolysin-type calcium-binding region; KEGG: mpo:Mpop_2542 hemolysin-type calcium-binding region YP_002419851.1 KEGG: mpo:Mpop_2553 hypothetical protein YP_002419852.1 PFAM: YHS domain protein; KEGG: mpo:Mpop_2554 heavy metal translocating P-type ATPase YP_002419853.1 PFAM: lytic transglycosylase catalytic; KEGG: mpo:Mpop_2555 lytic transglycosylase catalytic YP_002419854.1 KEGG: mpo:Mpop_2577 hypothetical protein YP_002419855.1 KEGG: mpo:Mpop_2557 conserved hypothetical protein; exported protein YP_002419856.1 PFAM: protein of unknown function DUF411; KEGG: mpo:Mpop_2562 protein of unknown function DUF411 YP_002419857.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mpo:Mpop_2563 heavy metal efflux pump, CzcA family YP_002419858.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mpo:Mpop_2564 efflux transporter RND family, MFP subunit YP_002419859.1 KEGG: mpo:Mpop_2565 hypothetical protein YP_002419860.1 KEGG: mpo:Mpop_2567 hypothetical protein YP_002419861.1 KEGG: mpo:Mpop_2571 hypothetical protein YP_002419862.1 PFAM: protein of unknown function DUF1109; KEGG: mpo:Mpop_2572 protein of unknown function DUF1109 YP_002419863.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_002419865.1 PFAM: protein of unknown function DUF305; KEGG: mpo:Mpop_2575 hypothetical protein YP_002419866.1 KEGG: mpo:Mpop_2557 conserved hypothetical protein; exported protein YP_002419867.1 KEGG: mpo:Mpop_2577 hypothetical protein YP_002419868.1 KEGG: mpo:Mpop_2578 outer membrane efflux protein YP_002419869.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: mpo:Mpop_2579 multicopper oxidase type 3 YP_002419870.1 KEGG: mpo:Mpop_2580 hypothetical protein YP_002419871.1 PFAM: protein of unknown function DUF305; KEGG: mpo:Mpop_2581 hypothetical protein YP_002419872.1 KEGG: mpo:Mpop_2582 cytochrome C family protein YP_002419873.1 KEGG: mpo:Mpop_2584 hypothetical protein YP_002419874.1 KEGG: hip:CGSHiEE_04655 hypothetical protein YP_002419875.1 KEGG: mrd:Mrad2831_6454 hypothetical protein YP_002419876.1 KEGG: rme:Rmet_3038 hypothetical protein YP_002419877.1 PFAM: MOFRL domain protein; KEGG: mpo:Mpop_4659 hydroxypyruvate reductase YP_002419878.1 KEGG: mrd:Mrad2831_3358 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta YP_002419879.1 KEGG: mpo:Mpop_1896 hypothetical protein YP_002419880.1 TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: mex:Mext_3863 arsenical resistance protein ArsH YP_002419881.1 SMART: regulatory protein ArsR; KEGG: mpo:Mpop_4055 ArsR family transcriptional regulator YP_002419882.1 PFAM: protein-tyrosine phosphatase, low molecular weight; KEGG: mpo:Mpop_4054 protein tyrosine phosphatase YP_002419883.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: mpo:Mpop_4053 arsenate reductase YP_002419884.1 TIGRFAM: arsenic resistance protein; PFAM: Bile acid:sodium symporter; KEGG: mpo:Mpop_4052 arsenic resistance protein YP_002419885.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1916 major facilitator transporter YP_002419886.1 KEGG: bra:BRADO0700 hypothetical protein YP_002419887.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: nha:Nham_2657 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_002419888.1 PFAM: transposase IS3/IS911 family protein; KEGG: mpo:Mpop_3816 transposase IS3/IS911 family protein YP_002419889.1 PFAM: integrase catalytic region; KEGG: mpo:Mpop_3817 integrase catalytic region YP_002419890.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_0458 sigma-70 family RNA polymerase sigma factor YP_002419891.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: rpt:Rpal_1106 filamentation induced by cAMP protein Fic YP_002419892.1 KEGG: mrd:Mrad2831_2559 cytochrome C biogenesis protein transmembrane region YP_002419893.1 PFAM: carbohydrate-selective porin OprB; KEGG: nha:Nham_2969 carbohydrate-selective porin OprB YP_002419894.1 KEGG: bvi:Bcep1808_7510 hypothetical protein YP_002419896.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpo:Mpop_4076 transcriptional regulator YP_002419897.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mpo:Mpop_4077 integral membrane sensor signal transduction histidine kinase YP_002419898.1 KEGG: mpo:Mpop_4079 hypothetical protein YP_002419900.1 KEGG: mrd:Mrad2831_1404 hypothetical protein YP_002419901.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mpo:Mpop_4082 efflux transporter RND family, MFP subunit YP_002419902.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mpo:Mpop_4083 heavy metal efflux pump, CzcA family YP_002419903.1 KEGG: mpo:Mpop_4085 hypothetical protein YP_002419904.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mpo:Mpop_4086 cation diffusion facilitator family transporter YP_002419905.1 KEGG: mpo:Mpop_4087 hypothetical protein YP_002419906.1 KEGG: xau:Xaut_0674 hypothetical protein YP_002419908.1 KEGG: mes:Meso_4409 hypothetical protein YP_002419909.1 PFAM: protein of unknown function DUF1526; KEGG: mag:amb1131 hypothetical protein YP_002419911.1 PFAM: integrase catalytic region; KEGG: mpo:Mpop_3817 integrase catalytic region YP_002419912.1 PFAM: transposase IS3/IS911 family protein; KEGG: mpo:Mpop_3816 transposase IS3/IS911 family protein YP_002419913.1 KEGG: mrd:Mrad2831_4774 pentapeptide repeat-containing protein YP_002419914.1 KEGG: mpo:Mpop_3234 integrase family protein YP_002419915.1 KEGG: mpo:Mpop_3233 integrase family protein YP_002419916.1 KEGG: gur:Gura_4266 hypothetical protein YP_002419917.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: acr:Acry_3394 transposase IS116/IS110/IS902 family protein YP_002419918.1 PFAM: integrase catalytic region; KEGG: mrd:Mrad2831_6485 integrase catalytic region YP_002419919.1 KEGG: mrd:Mrad2831_5182 transposase YP_002419920.1 KEGG: mpo:Mpop_4120 cytochrome C biogenesis protein transmembrane region YP_002419921.1 KEGG: mpo:Mpop_4119 protein of unknown function DUF949 YP_002419922.1 TIGRFAM: lipoprotein signal peptidase; KEGG: mpo:Mpop_4118 peptidase A8 signal peptidase II YP_002419923.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mpo:Mpop_4117 ATPase P YP_002419924.1 PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; KEGG: mpo:Mpop_4116 MerR family transcriptional regulator YP_002419925.1 KEGG: mpo:Mpop_4130 copper-translocating P-type ATPase; TIGRFAM: ATPase P; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein YP_002419926.1 PFAM: protein of unknown function DUF305; KEGG: sme:SMa1024 hypothetical protein YP_002419927.1 KEGG: mpo:Mpop_2537 protein of unknown function DUF326 YP_002419928.1 PFAM: protein of unknown function DUF305; KEGG: mpo:Mpop_0108 protein of unknown function DUF305 YP_002419929.1 KEGG: mpo:Mpop_0109 hypothetical protein YP_002419930.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mpo:Mpop_0110 heavy metal efflux pump, CzcA family YP_002419931.1 TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: mpo:Mpop_4125 efflux transporter RND family, MFP subunit YP_002419932.1 KEGG: mpo:Mpop_0112 hypothetical protein YP_002419933.1 KEGG: mrd:Mrad2831_2531 heavy metal transport/detoxification protein YP_002419934.1 KEGG: mpo:Mpop_4114 hypothetical protein YP_002419935.1 PFAM: protein of unknown function DUF411; KEGG: mpo:Mpop_4113 protein of unknown function DUF411 YP_002419936.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mpo:Mpop_4112 heavy metal efflux pump, CzcA family YP_002419937.1 PFAM: transposase IS3/IS911 family protein; KEGG: dde:Dde_2906 Fis family transcriptional regulator YP_002419938.1 PFAM: integrase catalytic region; KEGG: bcj:BCAM1952 transposase YP_002419941.1 KEGG: LOC100030415; hypothetical protein LOC100030415 YP_002419942.1 KEGG: mpo:Mpop_4084 exported protein of unknown function YP_002419944.1 KEGG: mrd:Mrad2831_0880 hypothetical protein YP_002419945.1 PFAM: transposase mutator type; KEGG: mrd:Mrad2831_2616 transposase mutator type YP_002419946.1 PFAM: plasmid maintenance system killer; KEGG: mpo:Mpop_3936 plasmid maintenance system killer YP_002419947.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: mpo:Mpop_3935 plasmid maintenance system antidote protein, XRE family YP_002419949.1 KEGG: rpt:Rpal_3729 hypothetical protein YP_002419951.1 KEGG: mex:Mext_4519 hypothetical protein YP_002419952.1 KEGG: shl:Shal_1751 hypothetical protein YP_002419953.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bra:BRADO4000 OprD regulatory protein YP_002419954.1 PFAM: cupin; KEGG: bbt:BBta_2281 transcriptional regulator YP_002419955.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_6467 major facilitator transporter YP_002419956.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bid:Bind_1760 short-chain dehydrogenase/reductase SDR YP_002419957.1 KEGG: ank:AnaeK_3353 hypothetical protein YP_002419958.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bra:BRADO4000 OprD regulatory protein YP_002419959.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; aldehyde dehydrogenase, conserved site; KEGG: mrd:Mrad2831_4261 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_002419960.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mrd:Mrad2831_4262 molybdopterin dehydrogenase FAD-binding YP_002419961.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mrd:Mrad2831_4263 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_002419962.1 PFAM: cupin; KEGG: bxe:Bxe_B1954 hypothetical protein YP_002419965.1 PFAM: GTPase EngC; KEGG: mex:Mext_1006 GTPase EngC YP_002419966.1 PFAM: peptidase M23; KEGG: mex:Mext_1023 peptidase M23B YP_002419967.1 PFAM: protein of unknown function DUF1311; KEGG: mex:Mext_1024 hypothetical protein YP_002419968.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: mex:Mext_1025 glutamyl-tRNA synthetase class Ic YP_002419969.1 KEGG: mex:Mext_1026 hypothetical protein YP_002419970.1 KEGG: mpo:Mpop_0959 hypothetical protein YP_002419971.1 molecular chaperone YP_002419972.1 KEGG: mex:Mext_1029 hypothetical protein YP_002419973.1 PFAM: gamma-glutamyltranspeptidase; KEGG: mex:Mext_1030 gamma-glutamyltransferase YP_002419974.1 PFAM: Dak kinase; Dak phosphatase; KEGG: mex:Mext_1031 glycerone kinase YP_002419975.1 PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_1032 methyltransferase type 11 YP_002419976.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1033 major facilitator transporter YP_002419977.1 KEGG: mex:Mext_1034 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_002419978.1 KEGG: mex:Mext_1035 CobE protein YP_002419979.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_1036 diguanylate cyclase YP_002419980.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1037 LysR substrate-binding YP_002419981.1 PFAM: hypothetical protein; KEGG: mex:Mext_1038 transmembrane pair domain-containing protein YP_002419982.1 TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_1039 precorrin-4 C11-methyltransferase YP_002419983.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid YP_002419984.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_1041 helix-turn-helix domain-containing protein YP_002419985.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: mex:Mext_1042 antibiotic biosynthesis monooxygenase YP_002419986.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1043 major facilitator transporter YP_002419987.1 TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: mex:Mext_1044 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_002419988.1 KEGG: mex:Mext_1045 Fe2+/Zn2+ uptake regulation protein-like protein YP_002419989.1 KEGG: mpo:Mpop_0976 hypothetical protein YP_002419990.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1046 ABC transporter YP_002419991.1 PFAM: ABC transporter; KEGG: mex:Mext_1047 ABC transporter YP_002419992.1 KEGG: mpo:Mpop_0996 hypothetical protein YP_002419993.1 KEGG: mex:Mext_1048 DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III subunit alpha; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_002419994.1 KEGG: mex:Mext_1049 hypothetical protein YP_002419995.1 PFAM: cation transport protein ChaC; AIG2 family protein; KEGG: mex:Mext_1050 cation transport protein ChaC YP_002419996.1 KEGG: mpo:Mpop_0992 hypothetical protein YP_002419997.1 TIGRFAM: DNA repair protein RecO; PFAM: recombination protein O RecO; KEGG: mex:Mext_1051 DNA repair protein RecO YP_002419998.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_002419999.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_002420000.1 PFAM: extracellular ligand-binding receptor; KEGG: mex:Mext_1054 extracellular ligand-binding receptor YP_002420001.1 PFAM: protein of unknown function DUF182; KEGG: mpo:Mpop_0987 protein of unknown function DUF182 YP_002420002.1 KEGG: mex:Mext_1056 xanthine dehydrogenase accessory factor YP_002420003.1 PFAM: molybdopterin binding domain; KEGG: mex:Mext_1057 molybdopterin binding domain-containing protein YP_002420004.1 KEGG: mex:Mext_1058 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_002420005.1 KEGG: mex:Mext_1059 hypothetical protein YP_002420006.1 PFAM: formyl transferase; KEGG: mex:Mext_1060 formyl transferase domain-containing protein YP_002420007.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1061 short-chain dehydrogenase/reductase SDR YP_002420008.1 KEGG: mex:Mext_1062 hypothetical protein YP_002420009.1 PFAM: Exopolysaccharide synthesis ExoD; KEGG: mpo:Mpop_0979 exopolysaccharide synthesis ExoD YP_002420010.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1064 ABC transporter YP_002420011.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: mex:Mext_1065 LolC/E family lipoprotein releasing system, transmembrane protein YP_002420012.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_002420013.1 PFAM: protein of unknown function DUF1467; KEGG: mex:Mext_1068 hypothetical protein YP_002420014.1 KEGG: mex:Mext_1069 methylmalonyl-CoA epimerase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase YP_002420015.1 PFAM: beta-lactamase; RNA-metabolising metallo-beta-lactamase; KEGG: mex:Mext_1070 beta-lactamase domain-containing protein YP_002420016.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: mex:Mext_1071 biotin--acetyl-CoA-carboxylase ligase YP_002420017.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: mex:Mext_1072 proton-translocating NADH-quinone oxidoreductase, chain N YP_002420018.1 KEGG: mex:Mext_1073 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_002420019.1 KEGG: mex:Mext_1074 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I) YP_002420020.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: mpo:Mpop_1009 NADH-ubiquinone oxidoreductase chain 4L YP_002420021.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: mex:Mext_1076 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_002420022.1 Catalyzes the transfer of electrons from NADH to quinone YP_002420023.1 Catalyzes the transfer of electrons from NADH to quinone YP_002420024.1 Catalyzes the transfer of electrons from NADH to quinone YP_002420025.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase YP_002420026.1 KEGG: mex:Mext_1081 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_002420027.1 KEGG: mex:Mext_1082 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_002420028.1 KEGG: mex:Mext_1083 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_002420029.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_002420030.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: mpo:Mpop_1019 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_002420031.1 PFAM: SCP-like extracellular; KEGG: mex:Mext_1086 SCP-like extracellular YP_002420032.1 TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain protein; KEGG: mex:Mext_1087 pseudoazurin YP_002420033.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain oligomerisation; carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: mex:Mext_1088 carbamoyl-phosphate synthase, large subunit YP_002420034.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus YP_002420035.1 KEGG: mex:Mext_1090 hypothetical protein YP_002420036.1 PFAM: protein of unknown function DUF1022; KEGG: mex:Mext_1091 hypothetical protein YP_002420037.1 KEGG: mex:Mext_1092 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002420038.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1093 LysR substrate-binding YP_002420039.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_002420040.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: mex:Mext_1095 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_002420041.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mex:Mext_1096 acetyl-CoA carboxylase, biotin carboxylase YP_002420042.1 KEGG: mex:Mext_1097 leucyltransferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_002420043.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_1098 regulatory protein TetR YP_002420044.1 KEGG: mex:Mext_1099 hypothetical protein YP_002420045.1 KEGG: mex:Mext_1100 hypothetical protein YP_002420046.1 PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: mex:Mext_1101 NADH:ubiquinone oxidoreductase 17.2 kD subunit YP_002420047.1 Catalyzes the rate-limiting step in dNTP synthesis YP_002420048.1 PFAM: K potassium transporter; KEGG: mpo:Mpop_0308 K potassium transporter YP_002420049.1 KEGG: mex:Mext_1123 hypothetical protein YP_002420050.1 KEGG: mex:Mext_1125 hypothetical protein YP_002420051.1 PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: mex:Mext_1126 platelet-activating factor acetylhydrolase plasma/intracellular isoform II YP_002420052.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_1127 metallophosphoesterase YP_002420053.1 KEGG: mex:Mext_1128 hypothetical protein YP_002420055.1 PFAM: protein of unknown function DUF892; KEGG: mex:Mext_1129 hypothetical protein YP_002420056.1 KEGG: mex:Mext_1130 hypothetical protein YP_002420057.1 PFAM: formate/nitrite transporter; KEGG: mex:Mext_1131 formate/nitrite transporter YP_002420058.1 PFAM: tyrosine protein kinase; aminoglycoside phosphotransferase; protein phosphatase 2C-like; serine/threonine protein kinase-related; SMART: protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: mex:Mext_1132 protein kinase YP_002420059.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1133 cellulose synthase (UDP-forming) YP_002420060.1 KEGG: mex:Mext_1134 hypothetical protein YP_002420061.1 KEGG: mpo:Mpop_3719 hypothetical protein YP_002420062.1 PFAM: PRC-barrel domain protein; KEGG: mex:Mext_1105 PRC-barrel domain-containing protein YP_002420063.1 PFAM: ion transporter; ion transport 2 domain protein; KEGG: mex:Mext_1106 ion transport 2 domain-containing protein YP_002420064.1 KEGG: mex:Mext_1107 hypothetical protein YP_002420065.1 PFAM: protein of unknown function DUF421; KEGG: mex:Mext_1108 hypothetical protein YP_002420066.1 PFAM: endoribonuclease L-PSP; KEGG: mex:Mext_1109 endoribonuclease L-PSP YP_002420067.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mex:Mext_1110 NADH:flavin oxidoreductase/NADH oxidase YP_002420068.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1111 carbonate dehydratase YP_002420069.1 KEGG: mex:Mext_1112 hypothetical protein YP_002420070.1 KEGG: hypothetical protein YP_002420071.1 KEGG: mex:Mext_1113 hypothetical protein YP_002420072.1 KEGG: mxa:MXAN_3681 hypothetical protein YP_002420073.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mrd:Mrad2831_4570 LysR family transcriptional regulator YP_002420074.1 PFAM: NMT1/THI5 like domain protein; KEGG: mrd:Mrad2831_4569 NMT1/THI5-like domain-containing protein YP_002420075.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mrd:Mrad2831_4568 binding-protein-dependent transporters inner membrane component YP_002420076.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mrd:Mrad2831_4567 ABC transporter YP_002420077.1 KEGG: mpo:Mpop_3788 hypothetical protein YP_002420078.1 catalyzes the hydrolysis of allophanate YP_002420079.1 PFAM: ribonuclease BN; KEGG: mex:Mext_1115 ribonuclease BN YP_002420080.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mex:Mext_1116 NAD-dependent epimerase/dehydratase YP_002420081.1 KEGG: mex:Mext_1117 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002420082.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1118 short-chain dehydrogenase/reductase SDR YP_002420083.1 PFAM: protein of unknown function DUF938; KEGG: mex:Mext_1119 hypothetical protein YP_002420084.1 KEGG: mex:Mext_1120 hypothetical protein YP_002420085.1 KEGG: mex:Mext_1135 hypothetical protein YP_002420086.1 KEGG: met:M446_1199 hypothetical protein YP_002420087.1 KEGG: mrd:Mrad2831_0784 adenylate/guanylate cyclase YP_002420088.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_0032 ROSMUCR transcriptional regulator YP_002420089.1 KEGG: mex:Mext_0033 hypothetical protein YP_002420090.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_0034 helix-turn-helix domain-containing protein YP_002420091.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_0035 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_002420092.1 PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: mex:Mext_0036 kojibiose phosphorylase YP_002420093.1 TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain protein; KEGG: mex:Mext_0037 YidE/YbjL duplication YP_002420094.1 PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: mex:Mext_0038 kojibiose phosphorylase YP_002420095.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: mex:Mext_0039 HAD family hydrolase YP_002420096.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: mex:Mext_0040 phosphoketolase YP_002420097.1 KEGG: mex:Mext_0041 hypothetical protein YP_002420098.1 KEGG: mex:Mext_0042 hypothetical protein YP_002420099.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_0043 helix-turn-helix domain-containing protein YP_002420100.1 KEGG: met:M446_1577 hypothetical protein YP_002420101.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_0045 helix-turn-helix domain-containing protein YP_002420102.1 KEGG: mex:Mext_0047 hypothetical protein YP_002420103.1 KEGG: mex:Mext_0048 hypothetical protein YP_002420104.1 PFAM: sulfate transporter/antisigma-factor antagonist STAS; xanthine/uracil/vitamin C permease; sulfate transporter; KEGG: mex:Mext_0049 sulfate transporter YP_002420105.1 KEGG: mex:Mext_0050 hypothetical protein YP_002420106.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_0051 GCN5-related N-acetyltransferase YP_002420107.1 PFAM: phosphate acetyl/butaryl transferase; KEGG: mex:Mext_0052 phosphate butyryltransferase YP_002420108.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: mex:Mext_0053 acetate kinase YP_002420109.1 KEGG: mex:Mext_0054 hypothetical protein YP_002420110.1 PFAM: protein of unknown function DUF344; KEGG: mex:Mext_1138 hypothetical protein YP_002420111.1 TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_1139 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_002420112.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_1140 RND family efflux transporter MFP subunit YP_002420113.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mex:Mext_1142 protein of unknown function DUF395 YeeE/YedE YP_002420114.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mex:Mext_1143 protein of unknown function DUF395 YeeE/YedE YP_002420115.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; E1-E2 ATPase-associated domain protein; KEGG: met:M446_3593 heavy metal translocating P-type ATPase YP_002420116.1 PFAM: regulatory protein ArsR; transcriptional regulator TrmB; KEGG: mex:Mext_1145 regulatory protein ArsR YP_002420117.1 KEGG: mpo:Mpop_4661 nitrate ABC transporter ATPase subunits C and D; TIGRFAM: nitrate ABC transporter ATPases C and D; PFAM: ABC transporter; SMART: ATPase AAA YP_002420118.1 TIGRFAM: nitrate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1147 nitrate ABC transporter inner membrane subunit YP_002420119.1 KEGG: mex:Mext_1148 nitrate-binding ABC transporter substrate-binding protein YP_002420120.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rubredoxin-type Fe(Cys)4 protein; KEGG: mex:Mext_1149 rubredoxin-type Fe(Cys)4 protein YP_002420121.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mex:Mext_1150 acyl-CoA dehydrogenase-like protein YP_002420122.1 PFAM: OsmC family protein; KEGG: mex:Mext_1151 OsmC family protein YP_002420123.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: mex:Mext_1152 sigma-54 factor interaction domain-containing protein YP_002420124.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: mex:Mext_1153 ThiJ/PfpI domain-containing protein YP_002420125.1 PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_1154 ThiJ/PfpI domain-containing protein YP_002420126.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: mex:Mext_1155 SSS family solute/sodium (Na+) symporter YP_002420127.1 PFAM: protein of unknown function DUF485; KEGG: mex:Mext_1156 hypothetical protein YP_002420128.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mex:Mext_1157 nitrilase YP_002420129.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1158 LysR substrate-binding YP_002420130.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_1159 sigma-70 family RNA polymerase sigma factor YP_002420131.1 KEGG: mrd:Mrad2831_2336 hypothetical protein YP_002420132.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_1160 helix-turn-helix domain-containing protein YP_002420133.1 KEGG: mex:Mext_1161 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_002420134.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD; KEGG: mex:Mext_1162 HlyD family type I secretion membrane fusion protein YP_002420135.1 KEGG: mex:Mext_1163 hypothetical protein YP_002420136.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1164 cellulose synthase (UDP-forming) YP_002420137.1 KEGG: mex:Mext_1165 hypothetical protein YP_002420138.1 KEGG: mex:Mext_1166 hypothetical protein YP_002420139.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1167 ABC transporter YP_002420140.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1168 binding-protein-dependent transport systems inner membrane component YP_002420141.1 KEGG: mex:Mext_1169 ABC transporter substrate-binding protein YP_002420142.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_1170 acyl-CoA dehydrogenase domain-containing protein YP_002420143.1 PFAM: monooxygenase; KEGG: mex:Mext_1171 alkanesulfonate monooxygenase YP_002420144.1 TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: mex:Mext_1172 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein YP_002420145.1 PFAM: cupin; KEGG: mex:Mext_1173 cupin 2 domain-containing protein YP_002420146.1 KEGG: mex:Mext_1175 hypothetical protein YP_002420147.1 KEGG: mex:Mext_1176 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein YP_002420148.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_1177 cyclic nucleotide-binding YP_002420149.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mex:Mext_1178 SufS subfamily cysteine desulfurase YP_002420150.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_1181 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002420151.1 KEGG: mex:Mext_1182 porin YP_002420152.1 KEGG: mex:Mext_1183 hypothetical protein YP_002420153.1 PFAM: protein of unknown function DUF1236; KEGG: mex:Mext_1184 hypothetical protein YP_002420155.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_1185 cold-shock protein DNA-binding YP_002420156.1 KEGG: mex:Mext_1186 signal peptide YP_002420157.1 KEGG: mex:Mext_1187 hypothetical protein YP_002420158.1 KEGG: mex:Mext_1188 hypothetical protein YP_002420159.1 KEGG: mex:Mext_1189 ABC-type Co2+ transport system, periplasmic component YP_002420160.1 KEGG: mex:Mext_1190 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002420161.1 PFAM: membrane protein of uknown function UCP014873; KEGG: mex:Mext_1191 hypothetical protein YP_002420162.1 in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever YP_002420163.1 KEGG: mex:Mext_1193 hypothetical protein YP_002420164.1 involved in the assembly of the urease metallocenter; nickel donor YP_002420165.1 PFAM: urease accessory protein UreF; KEGG: mex:Mext_1195 urease accessory protein UreF YP_002420166.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_002420167.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_002420168.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: mex:Mext_1198 urease accessory protein UreG YP_002420169.1 PFAM: urease accessory protein UreD; KEGG: mex:Mext_1199 urease accessory protein UreD YP_002420170.1 TIGRFAM: urea ABC transporter urea binding protein; KEGG: mex:Mext_1200 UreA ABC transporter UreA binding protein YP_002420171.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1202 TonB-dependent siderophore receptor YP_002420172.1 KEGG: mex:Mext_1203 hypothetical protein YP_002420173.1 KEGG: mex:Mext_1204 hypothetical protein YP_002420174.1 PFAM: OsmC family protein; KEGG: mex:Mext_1205 OsmC family protein YP_002420175.1 KEGG: mex:Mext_1206 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002420176.1 catalyzes the formation of oxalyl-CoA from oxalate and formyl-CoA YP_002420177.1 PFAM: phospholipase/carboxylesterase; KEGG: mex:Mext_1208 phospholipase/carboxylesterase YP_002420178.1 catalyzes the formation of formyl-CoA from oxalyl-CoA YP_002420179.1 PFAM: Domain of unknown function DUF1929; KEGG: mex:Mext_1210 galactose oxidase YP_002420180.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1211 major facilitator transporter YP_002420181.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1212 major facilitator transporter YP_002420182.1 PFAM: CBS domain containing protein; KEGG: mex:Mext_1213 CBS domain-containing protein YP_002420183.1 KEGG: mex:Mext_1214 hypothetical protein YP_002420184.1 KEGG: mex:Mext_1215 hypothetical protein YP_002420185.1 KEGG: mex:Mext_1216 hypothetical protein YP_002420186.1 KEGG: mpo:Mpop_1156 hypothetical protein YP_002420187.1 TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mex:Mext_1217 formyl-CoA transferase YP_002420188.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_1218 GntR domain-containing protein YP_002420189.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_1219 cobalamin synthesis protein P47K YP_002420190.1 PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: mex:Mext_1220 serine-type D-Ala-D-Ala carboxypeptidase YP_002420191.1 KEGG: mex:Mext_1221 hypothetical protein YP_002420192.1 KEGG: mex:Mext_1222 hypothetical protein YP_002420193.1 KEGG: mex:Mext_1223 hypothetical protein YP_002420194.1 PFAM: monooxygenase FAD-binding; KEGG: mex:Mext_1224 monooxygenase FAD-binding YP_002420195.1 TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: mex:Mext_1225 queuosine biosynthesis protein QueD YP_002420196.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: mex:Mext_1226 ExsB protein YP_002420197.1 PFAM: LmbE family protein; KEGG: mex:Mext_1227 LmbE family protein YP_002420198.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1228 glycosyl transferase YP_002420199.1 KEGG: mex:Mext_1229 hypothetical protein YP_002420200.1 KEGG: mpo:Mpop_1168 hypothetical protein YP_002420201.1 KEGG: mex:Mext_1230 hypothetical protein YP_002420202.1 KEGG: mex:Mext_1231 hypothetical protein YP_002420203.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1232 glycosyl transferase YP_002420204.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1233 glycosyl transferase group 1 YP_002420205.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: mex:Mext_1234 HPr family phosphocarrier protein YP_002420206.1 PFAM: PTS system fructose subfamily IIA component; KEGG: mex:Mext_1235 PTS system fructose subfamily IIA component YP_002420207.1 KEGG: mex:Mext_1236 HPr kinase YP_002420208.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1237 ATPase domain-containing protein YP_002420209.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpo:Mpop_1179 transcriptional regulator YP_002420210.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_1239 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_002420211.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_002420212.1 TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: mex:Mext_1241 RND family efflux transporter MFP subunit YP_002420213.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_1242 CzcA family heavy metal efflux protein YP_002420214.1 KEGG: mex:Mext_1244 hypothetical protein YP_002420215.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: mex:Mext_1245 glycosyl transferase family protein YP_002420216.1 KEGG: mex:Mext_1247 hypothetical protein YP_002420217.1 PFAM: flagellar FlbT family protein; KEGG: mex:Mext_1248 flagellar FlbT family protein YP_002420218.1 KEGG: mex:Mext_1249 hypothetical protein YP_002420219.1 PFAM: acyltransferase 3; KEGG: mex:Mext_1250 acyltransferase 3 YP_002420220.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mex:Mext_1251 metal-dependent phosphohydrolase YP_002420221.1 KEGG: mex:Mext_1252 hypothetical protein YP_002420222.1 PFAM: protein of unknown function DUF442; KEGG: mex:Mext_1253 hypothetical protein YP_002420223.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential YP_002420224.1 KEGG: mex:Mext_1255 hypothetical protein YP_002420225.1 KEGG: mex:Mext_1256 hypothetical protein YP_002420226.1 PFAM: protein of unknown function DUF849; KEGG: mex:Mext_1257 hypothetical protein YP_002420227.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: mex:Mext_1258 sigma-54 factor interaction domain-containing protein YP_002420228.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1259 ATPase domain-containing protein YP_002420229.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1260 ABC transporter YP_002420230.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1261 binding-protein-dependent transport systems inner membrane component YP_002420231.1 PFAM: extracellular solute-binding protein family 3; KEGG: mex:Mext_1262 NMT1/THI5-like domain-containing protein YP_002420232.1 blocks the formation of polar Z-ring septums YP_002420233.1 KEGG: mex:Mext_1264 hypothetical protein YP_002420234.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: mex:Mext_1265 GTP-binding protein TypA YP_002420235.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; CHASE3 domain protein; KEGG: mex:Mext_1266 chemotaxis sensory transducer YP_002420236.1 blocks the formation of polar Z-ring septums YP_002420237.1 TIGRFAM: septum site-determining protein MinD; PFAM: cobyrinic acid ac-diamide synthase; KEGG: mex:Mext_1268 septum site-determining protein MinD YP_002420238.1 TIGRFAM: cell division topological specificity factor MinE; PFAM: septum formation topological specificity factor MinE; KEGG: mex:Mext_1269 cell division topological specificity factor MinE YP_002420239.1 PFAM: cytochrome P450; KEGG: mex:Mext_1270 cytochrome P450 YP_002420240.1 PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: mex:Mext_1271 SMP-30/gluconolaconase/LRE domain-containing protein YP_002420241.1 PFAM: glycoside hydrolase 15-related; KEGG: mpo:Mpop_1274 glycoside hydrolase 15-related YP_002420242.1 KEGG: mex:Mext_1273 dehydrogenase protein YP_002420243.1 PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_1274 carbohydrate-selective porin OprB YP_002420244.1 PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_1277 extracellular solute-binding protein YP_002420245.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1278 binding-protein-dependent transport systems inner membrane component YP_002420246.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1279 binding-protein-dependent transport systems inner membrane component YP_002420247.1 KEGG: mex:Mext_1280 oligopeptide/dipeptide ABC transporter ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA YP_002420248.1 KEGG: mex:Mext_1281 oligopeptide/dipeptide ABC transporter ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA YP_002420249.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: mex:Mext_1282 methylmalonate-semialdehyde dehydrogenase YP_002420250.1 PFAM: cyclase/dehydrase; carbon monoxide dehydrogenase subunit G; KEGG: mex:Mext_1283 carbon monoxide dehydrogenase subunit G YP_002420251.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1284 ABC transporter YP_002420252.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1285 ABC transporter YP_002420253.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_1286 inner-membrane translocator YP_002420254.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_1287 inner-membrane translocator YP_002420255.1 PFAM: extracellular ligand-binding receptor; KEGG: mex:Mext_1288 extracellular ligand-binding receptor YP_002420256.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_1289 carbon-monoxide dehydrogenase (acceptor) YP_002420257.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_1290 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_002420258.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: mex:Mext_1291 molybdopterin dehydrogenase FAD-binding YP_002420259.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_1292 regulatory protein TetR YP_002420260.1 KEGG: mex:Mext_1293 amidase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20 YP_002420261.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate YP_002420262.1 KEGG: mex:Mext_1297 hypothetical protein YP_002420263.1 PFAM: helicase; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase; SMART: DEAD-like helicases; KEGG: mex:Mext_1298 DEAD/DEAH box helicase domain-containing protein YP_002420264.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mex:Mext_1299 ammonium transporter YP_002420265.1 TIGRFAM: urea transporter; PFAM: Urea transporter; KEGG: mex:Mext_1300 UreA transporter YP_002420266.1 PFAM: urease accessory protein UreD; KEGG: mex:Mext_1301 urease accessory protein UreD YP_002420267.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: mex:Mext_1302 urease accessory protein UreG YP_002420268.1 PFAM: urease accessory protein UreF; KEGG: mex:Mext_1303 urease accessory protein UreF YP_002420269.1 PFAM: urease accessory protein UreE; KEGG: mex:Mext_1304 UreE urease accessory domain-containing protein YP_002420270.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling YP_002420271.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: mex:Mext_1306 CrcB protein YP_002420272.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_002420273.1 KEGG: mex:Mext_1308 urease subunit beta; TIGRFAM: urease, subunit beta; PFAM: urease subunit beta YP_002420274.1 KEGG: mex:Mext_1309 urease subunit gamma; TIGRFAM: urease subunit gamma; PFAM: urease subunit gamma region YP_002420275.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1310 TonB-dependent receptor plug YP_002420276.1 KEGG: mex:Mext_1311 ABC-type Co2+ transport system, periplasmic component YP_002420277.1 KEGG: mex:Mext_1312 hypothetical protein YP_002420278.1 KEGG: mex:Mext_1314 hypothetical protein YP_002420279.1 KEGG: mrd:Mrad2831_1299 hypothetical protein YP_002420280.1 PFAM: protein of unknown function DUF72; KEGG: mrd:Mrad2831_5900 hypothetical protein YP_002420281.1 KEGG: mrd:Mrad2831_4716 hypothetical protein YP_002420282.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: acr:Acry_1146 metal-dependent phosphohydrolase YP_002420283.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bac:BamMC406_5748 transcriptional regulator, AraC family YP_002420284.1 KEGG: met:M446_0536 hypothetical protein YP_002420285.1 KEGG: mrd:Mrad2831_5275 hypothetical protein YP_002420286.1 KEGG: mex:Mext_1890 hypothetical protein YP_002420287.1 PFAM: ATP-binding region ATPase domain protein; KEGG: met:M446_5593 integral membrane sensor signal transduction histidine kinase YP_002420288.1 TIGRFAM: lipoprotein A; PFAM: Rare lipoprotein A; KEGG: mex:Mext_0135 lipoprotein A YP_002420289.1 KEGG: mex:Mext_0134 hypothetical protein YP_002420291.1 KEGG: mpo:Mpop_4885 hypothetical protein YP_002420292.1 PFAM: regulatory protein LuxR; KEGG: met:M446_4636 LuxR family transcriptional regulator YP_002420293.1 PFAM: integrase catalytic region; KEGG: mex:Mext_3531 integrase catalytic region YP_002420294.1 PFAM: transposase IS3/IS911 family protein; KEGG: mex:Mext_3530 transposase IS3/IS911 family protein YP_002420296.1 KEGG: mpo:Mpop_1280 hypothetical protein YP_002420297.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mpo:Mpop_1281 Sel1 domain protein repeat-containing protein YP_002420298.1 KEGG: mpo:Mpop_1282 hypothetical protein YP_002420299.1 KEGG: mpo:Mpop_1283 large subunit of N,N-dimethylformamidase YP_002420300.1 KEGG: mpo:Mpop_1284 hypothetical protein YP_002420301.1 KEGG: mpo:Mpop_1285 UreA ABC transporter ATP-binding protein UrtE; TIGRFAM: urea ABC transporter ATP-binding protein UrtE; PFAM: ABC transporter; SMART: ATPase AAA YP_002420302.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mpo:Mpop_1286 ABC transporter YP_002420303.1 TIGRFAM: urea ABC transporter permease UrtC; PFAM: inner-membrane translocator; KEGG: mpo:Mpop_1287 UreA ABC transporter permease UrtC YP_002420304.1 PFAM: inner-membrane translocator; KEGG: mpo:Mpop_1288 inner-membrane translocator YP_002420305.1 KEGG: mpo:Mpop_1289 substrate-binding component of ABC transporter YP_002420306.1 PFAM: protein of unknown function DUF1486; KEGG: mpo:Mpop_3619 protein of unknown function DUF1486 YP_002420307.1 PFAM: glucose sorbosone dehydrogenase; KEGG: mex:Mext_1315 glucose sorbosone dehydrogenase YP_002420308.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_1316 alpha/beta hydrolase fold YP_002420309.1 KEGG: mex:Mext_1317 hypothetical protein YP_002420310.1 KEGG: mex:Mext_1318 hypothetical protein YP_002420311.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: mex:Mext_1319 hypothetical protein YP_002420312.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1320 hypothetical protein YP_002420313.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_1321 short-chain dehydrogenase/reductase SDR YP_002420314.1 KEGG: mex:Mext_1322 phosphoglycerate mutase 1 family protein; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: phosphoglycerate mutase YP_002420315.1 KEGG: mex:Mext_1323 hypothetical protein YP_002420316.1 KEGG: mex:Mext_1324 hypothetical protein YP_002420317.1 KEGG: mrd:Mrad2831_6030 hypothetical protein YP_002420319.1 KEGG: mex:Mext_1325 hypothetical protein YP_002420320.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1326 short-chain dehydrogenase/reductase SDR YP_002420321.1 KEGG: mrd:Mrad2831_4249 hypothetical protein YP_002420322.1 KEGG: mex:Mext_1327 hypothetical protein YP_002420323.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: mex:Mext_1328 alpha/beta hydrolase domain-containing protein YP_002420324.1 KEGG: mex:Mext_1329 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002420325.1 PFAM: cytochrome P450; KEGG: mex:Mext_1330 cytochrome P450 YP_002420326.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: mex:Mext_1331 diguanylate cyclase YP_002420327.1 PFAM: protein of unknown function DUF1194; KEGG: mex:Mext_1332 hypothetical protein YP_002420328.1 PFAM: ApbE family lipoprotein; KEGG: mex:Mext_1333 ApbE family lipoprotein YP_002420329.1 PFAM: FMN-binding domain protein; KEGG: mex:Mext_1334 FMN-binding domain-containing protein YP_002420330.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mpo:Mpop_4869 40-residue YVTN family beta-propeller repeat protein YP_002420331.1 KEGG: mex:Mext_1336 hypothetical protein YP_002420332.1 KEGG: mex:Mext_1337 cytochrome C550 YP_002420333.1 PFAM: extracellular solute-binding protein family 3; KEGG: mex:Mext_1338 extracellular solute-binding protein YP_002420334.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: pyrrolo-quinoline quinone; KEGG: mex:Mext_1339 methanol/ethanol family PQQ-dependent dehydrogenase YP_002420335.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1340 major facilitator transporter YP_002420336.1 KEGG: mex:Mext_1341 hypothetical protein YP_002420337.1 KEGG: mex:Mext_1342 hypothetical protein YP_002420338.1 KEGG: mex:Mext_1344 hypothetical protein YP_002420339.1 KEGG: mex:Mext_1345 hypothetical protein YP_002420340.1 KEGG: mex:Mext_1346 hypothetical protein YP_002420341.1 KEGG: mex:Mext_1347 hypothetical protein YP_002420342.1 KEGG: mex:Mext_1348 hypothetical protein YP_002420343.1 PFAM: peptidase M48 Ste24p; KEGG: mex:Mext_1349 peptidase M48 Ste24p YP_002420344.1 PFAM: cupin; KEGG: mex:Mext_1351 cupin 2 domain-containing protein YP_002420345.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1352 short-chain dehydrogenase/reductase SDR YP_002420346.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1353 carbonate dehydratase YP_002420347.1 PFAM: protein of unknown function DUF849; KEGG: mex:Mext_1354 hypothetical protein YP_002420348.1 PFAM: UspA domain protein; KEGG: mex:Mext_1355 UspA domain-containing protein YP_002420349.1 PFAM: cytochrome C class I; KEGG: mex:Mext_1356 cytochrome c class I YP_002420350.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_1357 cyclic nucleotide-binding YP_002420351.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1358 ABC transporter YP_002420352.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1359 ABC transporter YP_002420353.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: mex:Mext_1360 cytochrome bd ubiquinol oxidase subunit I YP_002420354.1 KEGG: mex:Mext_1361 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_002420355.1 TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: mex:Mext_1362 cyd operon protein YbgT YP_002420356.1 PFAM: regulatory protein DeoR; KEGG: mex:Mext_1363 regulatory protein DeoR YP_002420357.1 PFAM: amidase; KEGG: mex:Mext_1364 amidase YP_002420358.1 PFAM: response regulator receiver; KEGG: mex:Mext_1365 response regulator receiver YP_002420359.1 KEGG: mex:Mext_1366 hypothetical protein YP_002420360.1 KEGG: mex:Mext_1367 cellulose synthase catalytic subunit (UDP-forming); TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2 YP_002420361.1 PFAM: cellulose synthase subunit B; KEGG: mex:Mext_1368 hypothetical protein YP_002420362.1 PFAM: glycoside hydrolase family 8; KEGG: mex:Mext_1369 cellulase YP_002420363.1 KEGG: mex:Mext_1370 hypothetical protein YP_002420364.1 KEGG: mex:Mext_1371 hypothetical protein YP_002420365.1 KEGG: mpo:Mpop_4257 hypothetical protein YP_002420369.1 KEGG: pfo:Pfl01_5446 hypothetical protein YP_002420370.1 KEGG: mex:Mext_4382 hypothetical protein YP_002420371.1 PFAM: peptidoglycan-binding protein; KEGG: mex:Mext_4383 peptidoglycan binding domain-containing protein YP_002420372.1 KEGG: nar:Saro_2740 PE-PGRS family protein YP_002420375.1 KEGG: mex:Mext_3534 hypothetical protein YP_002420376.1 KEGG: mex:Mext_3535 NLP/P60 protein YP_002420377.1 PFAM: Domain of unknown function DUF1833; KEGG: mag:amb0393 hypothetical protein YP_002420379.1 PFAM: lytic transglycosylase catalytic; KEGG: mpo:Mpop_5452 hypothetical protein YP_002420383.1 KEGG: mlo:mlr8533 hypothetical protein YP_002420384.1 KEGG: bra:BRADO3637 hypothetical protein YP_002420385.1 KEGG: bra:BRADO3636 hypothetical protein YP_002420386.1 KEGG: mlo:mlr8530 hypothetical protein YP_002420387.1 KEGG: mxa:MXAN_1217 hypothetical protein YP_002420391.1 KEGG: ppw:PputW619_1340 hypothetical protein YP_002420392.1 TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: bpm:BURPS1710b_1682 HK97 family phage major capsid protein YP_002420393.1 TIGRFAM: phage prohead protease HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: nar:Saro_0648 prohead peptidase YP_002420394.1 TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: bpm:BURPS1710b_1680 HK97 family phage portal protein YP_002420395.1 PFAM: terminase; KEGG: oan:Oant_0238 phage terminase YP_002420396.1 PFAM: terminase small subunit; KEGG: bpt:Bpet0975 hypothetical protein YP_002420398.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mex:Mext_0765 HNH endonuclease YP_002420399.1 KEGG: aby:ABAYE2688 hypothetical protein YP_002420400.1 KEGG: mex:Mext_3541 hypothetical protein YP_002420402.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mpo:Mpop_2952 MucR family transcriptional regulator YP_002420403.1 KEGG: bxe:Bxe_A3081 hypothetical protein YP_002420406.1 KEGG: mpo:Mpop_1343 hypothetical protein YP_002420407.1 KEGG: mex:Mext_2440 hypothetical protein YP_002420408.1 PFAM: MT-A70 family protein; KEGG: ajs:Ajs_0426 MT-A70 family protein YP_002420409.1 KEGG: met:M446_4099 hypothetical protein YP_002420411.1 PFAM: endodeoxyribonuclease RusA; KEGG: mex:Mext_2442 hypothetical protein YP_002420412.1 KEGG: mpo:Mpop_2872 hypothetical protein YP_002420413.1 KEGG: mrd:Mrad2831_5725 hypothetical protein YP_002420417.1 KEGG: bja:bll5480 chaperone YP_002420418.1 PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: atc:AGR_C_784 hypothetical protein YP_002420420.1 KEGG: mrd:Mrad2831_5731 hypothetical protein YP_002420421.1 KEGG: mex:Mext_1589 hypothetical protein YP_002420426.1 KEGG: mrd:Mrad2831_1232 HNH nuclease YP_002420427.1 PFAM: helix-turn-helix domain protein; KEGG: nfa:nfa22390 transcriptional regulator YP_002420429.1 KEGG: rxy:Rxyl_0105 quinolinate synthetase YP_002420430.1 KEGG: dac:Daci_3228 hypothetical protein YP_002420433.1 KEGG: mucin-associated surface protein (MASP) YP_002420435.1 KEGG: hypothetical protein YP_002420437.1 KEGG: bja:bll8082 hypothetical protein YP_002420438.1 PFAM: integrase family protein; KEGG: mrd:Mrad2831_4162 integrase family protein YP_002420440.1 KEGG: mex:Mext_1375 hypothetical protein YP_002420441.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity YP_002420442.1 PFAM: peptidoglycan-binding protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_1377 peptidoglycan binding domain-containing protein YP_002420443.1 KEGG: mpo:Mpop_1372 hypothetical protein YP_002420444.1 PFAM: protein of unknown function DUF461; nuclear export factor GLE1; KEGG: mex:Mext_1378 hypothetical protein YP_002420445.1 PFAM: protein of unknown function DUF461; KEGG: mex:Mext_1379 hypothetical protein YP_002420446.1 PFAM: electron transporter SCO1/SenC; KEGG: mex:Mext_1380 electron transporter SCO1/SenC YP_002420447.1 KEGG: mex:Mext_1381 hypothetical protein YP_002420448.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1382 TonB-dependent receptor YP_002420449.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: mex:Mext_1383 peptidase C14 caspase catalytic subunit P20 YP_002420450.1 PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_1384 carbohydrate-selective porin OprB YP_002420451.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_1385 GntR domain-containing protein YP_002420452.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: mex:Mext_1386 TRAP dicarboxylate transporter-DctP subunit YP_002420453.1 PFAM: tripartite ATP-independent periplasmic transporter DctQ component; KEGG: mex:Mext_1387 tripartite ATP-independent periplasmic transporter DctQ YP_002420454.1 TIGRFAM: TRAP dicarboxylate transporter DctM subunit; PFAM: TRAP C4-dicarboxylate transporter permease DctM subunit; KEGG: mex:Mext_1388 TRAP dicarboxylate transporter DctM subunit YP_002420455.1 KEGG: mex:Mext_1389 hypothetical protein YP_002420456.1 KEGG: mex:Mext_1390 hypothetical protein YP_002420457.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mex:Mext_1391 pyridoxal-5'-phosphate-dependent protein beta subunit YP_002420458.1 KEGG: mex:Mext_1392 hypothetical protein YP_002420459.1 PFAM: peptidoglycan-binding protein; KEGG: mex:Mext_1393 peptidoglycan binding domain-containing protein YP_002420460.1 PFAM: protein of unknown function DUF606; KEGG: mex:Mext_1394 hypothetical protein YP_002420461.1 PFAM: alpha-2-macroglobulin; alpha-2-macroglobulin 2; KEGG: mex:Mext_1395 alpha-2-macroglobulin domain-containing protein YP_002420462.1 TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: mex:Mext_1396 penicillin-binding protein 1C YP_002420463.1 PFAM: small multidrug resistance protein; KEGG: mex:Mext_1397 small multidrug resistance protein YP_002420464.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_1398 helix-turn-helix domain-containing protein YP_002420465.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: mex:Mext_1399 sortase family protein YP_002420466.1 PFAM: von Willebrand factor type A; Vault protein inter-alpha-trypsin domain protein; SMART: Vault protein inter-alpha-trypsin, metazoa; KEGG: mex:Mext_1400 vault protein inter-alpha-trypsin subunit YP_002420467.1 PFAM: phosphoglycerate mutase; KEGG: mex:Mext_1401 phosphoglycerate mutase YP_002420468.1 KEGG: mex:Mext_1402 hypothetical protein YP_002420469.1 PFAM: high-affinity nickel-transporter; KEGG: mex:Mext_1403 high-affinity nickel-transporter YP_002420470.1 PFAM: protein of unknown function DUF1007; KEGG: mex:Mext_1404 hypothetical protein YP_002420471.1 PFAM: cytochrome C biogenesis protein; KEGG: mex:Mext_1405 cytochrome C biogenesis protein YP_002420472.1 PFAM: cytochrome C assembly protein; KEGG: mex:Mext_1406 cytochrome C assembly protein YP_002420473.1 PFAM: CcmE/CycJ protein; KEGG: mex:Mext_1407 CcmE/CycJ protein YP_002420474.1 TIGRFAM: cytochrome C biogenesis protein CcmI; KEGG: mex:Mext_1408 cytochrome C biogenesis protein CcmI YP_002420475.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: mex:Mext_1409 ATPase domain-containing protein YP_002420476.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_1411 response regulator receiver YP_002420477.1 KEGG: mex:Mext_1412 hypothetical protein YP_002420478.1 KEGG: mex:Mext_1413 hypothetical protein YP_002420479.1 KEGG: mex:Mext_1414 hypothetical protein YP_002420480.1 KEGG: mex:Mext_1415 hypothetical protein YP_002420481.1 PFAM: glycoside hydrolase family 24; KEGG: mex:Mext_1416 glycoside hydrolase family protein YP_002420482.1 KEGG: mex:Mext_1417 hypothetical protein YP_002420483.1 KEGG: mex:Mext_1418 gene transfer agent (GTA) orfg15, like protein YP_002420484.1 TIGRFAM: phage cell wall peptidase, NlpC/P60 family; KEGG: mex:Mext_1419 NlpC/P60 family phage cell wall peptidase YP_002420485.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1420 hypothetical protein YP_002420486.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1421 hypothetical protein YP_002420487.1 KEGG: mex:Mext_1422 gene transfer agent (GTA) orfg11 YP_002420488.1 KEGG: mex:Mext_1423 hypothetical protein YP_002420489.1 KEGG: mex:Mext_1424 gene transfer agent (GTA) orfg10 YP_002420490.1 TIGRFAM: phage major tail protein, TP901-1 family; PFAM: major tail protein TP901-1; KEGG: mex:Mext_1425 TP901-1 family phage major tail protein YP_002420491.1 KEGG: mex:Mext_1426 hypothetical protein YP_002420492.1 TIGRFAM: phage head-tail adaptor; PFAM: head-tail adaptor protein; KEGG: mex:Mext_1427 phage head-tail adaptor YP_002420493.1 KEGG: mex:Mext_1428 phiE125 gp8 family protein YP_002420494.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: mex:Mext_1429 peptidase S1 and S6 chymotrypsin/Hap YP_002420495.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: mex:Mext_1430 peptidase S1 and S6 chymotrypsin/Hap YP_002420496.1 TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: mex:Mext_1431 HK97 family phage major capsid protein YP_002420497.1 TIGRFAM: phage prohead protease HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: mex:Mext_1432 HK97 family phage prohead protease YP_002420498.1 TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: mex:Mext_1433 HK97 family phage portal protein YP_002420499.1 PFAM: protein of unknown function DUF264; KEGG: mex:Mext_1434 hypothetical protein YP_002420500.1 KEGG: mpo:Mpop_1431 hypothetical protein YP_002420501.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_1435 precorrin-3B C17-methyltransferase YP_002420502.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_1436 precorrin-2 C20-methyltransferase YP_002420503.1 PFAM: precorrin-8X methylmutase CbiC/CobH; KEGG: mex:Mext_1437 precorrin-8X methylmutase YP_002420504.1 TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: mex:Mext_1438 precorrin-3B synthase YP_002420505.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism YP_002420506.1 KEGG: mex:Mext_1440 hypothetical protein YP_002420507.1 TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_1441 cobalamin biosynthesis protein CobW YP_002420508.1 PFAM: protein of unknown function DUF1636; KEGG: mex:Mext_1442 hypothetical protein YP_002420509.1 TIGRFAM: cobalt transporter subunit CbtA; PFAM: Cobalt transporter subunit CbtA KEGG: mex:Mext_1443 cobalt transporter subunit CbtA YP_002420510.1 TIGRFAM: cobalt transporter subunit CbtB; PFAM: Cobalt transporter subunit CbtB KEGG: mex:Mext_1444 cobalt transporter subunit CbtB YP_002420511.1 KEGG: mex:Mext_1445 hypothetical protein YP_002420512.1 PFAM: regulatory protein MarR; KEGG: mex:Mext_1446 regulatory protein MarR YP_002420513.1 PFAM: cobalbumin biosynthesis protein; KEGG: mex:Mext_1447 adenosylcobinamide-phosphate guanylyltransferase YP_002420514.1 KEGG: mex:Mext_1448 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_002420515.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle YP_002420516.1 TIGRFAM: formaldehyde-activating enzyme; PFAM: formaldehyde-activating enzyme (Fae); KEGG: mex:Mext_1450 formaldehyde-activating enzyme YP_002420517.1 KEGG: mex:Mext_1451 hypothetical protein YP_002420518.1 KEGG: mex:Mext_1452 hypothetical protein YP_002420519.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_1453 alpha/beta hydrolase fold YP_002420520.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_1454 chemotaxis sensory transducer YP_002420521.1 KEGG: mex:Mext_1455 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002420522.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: psp:PSPPH_1098 hypothetical protein YP_002420523.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cti:RALTA_B2299 transcription regulator, AraC family YP_002420524.1 PFAM: protein of unknown function DUF1355; KEGG: mex:Mext_1456 hypothetical protein YP_002420525.1 TIGRFAM: conserved hypothetical protein; KEGG: mex:Mext_1457 hypothetical protein YP_002420526.1 PFAM: protein of unknown function DUF58; KEGG: mex:Mext_1458 hypothetical protein YP_002420527.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase AAA; KEGG: mex:Mext_1459 ATPase YP_002420528.1 PFAM: thioesterase superfamily protein; KEGG: mex:Mext_1460 thioesterase superfamily protein YP_002420529.1 PFAM: protein of unknown function DUF1285; KEGG: mex:Mext_1461 hypothetical protein YP_002420530.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_1462 NUDIX hydrolase YP_002420531.1 KEGG: mex:Mext_1463 hypothetical protein YP_002420532.1 PFAM: polynucleotide adenylyltransferase region; KEGG: mex:Mext_1464 polynucleotide adenylyltransferase region YP_002420533.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane YP_002420534.1 KEGG: mpo:Mpop_1464 hypothetical protein YP_002420535.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_002420536.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit YP_002420537.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_002420538.1 TIGRFAM: ATP synthase F1 subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: mpo:Mpop_1468 ATP synthase F1 subunit delta YP_002420539.1 PFAM: ferrochelatase; KEGG: mex:Mext_1470 ferrochelatase YP_002420540.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_1471 methyltransferase type 11 YP_002420541.1 PFAM: metallophosphoesterase; 5'-nucleotidase domain protein; KEGG: mex:Mext_1472 5'-nucleotidase YP_002420542.1 PFAM: uracil-DNA glycosylase superfamily; KEGG: mex:Mext_1473 uracil-DNA glycosylase superfamily protein YP_002420543.1 SMART: rhodanese; KEGG: mex:Mext_1474 rhodanese YP_002420544.1 TIGRFAM: chromate transporter chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: mex:Mext_1475 chromate transporter YP_002420545.1 KEGG: mex:Mext_1476 hypothetical protein YP_002420546.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mex:Mext_1477 PpiC-type peptidyl-prolyl cis-trans isomerase YP_002420547.1 TIGRFAM: preprotein translocase, Secsubunit alpha; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: mex:Mext_1478 preprotein translocase, Secsubunit alpha YP_002420548.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_1479 GCN5-related N-acetyltransferase YP_002420549.1 PFAM: beta-lactamase; KEGG: mex:Mext_1480 beta-lactamase YP_002420550.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: mex:Mext_1481 4'-phosphopantetheinyl transferase YP_002420551.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_1482 NUDIX hydrolase YP_002420552.1 TIGRFAM: esterase, PHB depolymerase family; PFAM: esterase PHB depolymerase; KEGG: mex:Mext_1483 PHB depolymerase family esterase YP_002420553.1 KEGG: mex:Mext_1484 CopG family transcriptional regulator YP_002420554.1 KEGG: mex:Mext_1485 DNA polymerase III epsilon subunit; TIGRFAM: DNA polymerase III subunit epsilon; PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease YP_002420555.1 PFAM: protein of unknown function DUF497; KEGG: mex:Mext_1486 hypothetical protein YP_002420556.1 SMART: helix-turn-helix domain protein; KEGG: mex:Mext_1487 helix-turn-helix domain-containing protein YP_002420557.1 KEGG: mex:Mext_1488 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_002420558.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: shikimate/quinate 5-dehydrogenase; shikimate dehydrogenase substrate binding domain protein; KEGG: mex:Mext_1489 shikimate 5-dehydrogenase YP_002420559.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mex:Mext_1490 cation diffusion facilitator family transporter YP_002420560.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: mex:Mext_1491 maf protein YP_002420561.1 KEGG: mex:Mext_1492 capsular polysaccharide biosynthesis protein-like protein YP_002420562.1 PFAM: protein of unknown function DUF299; KEGG: mex:Mext_1493 hypothetical protein YP_002420563.1 KEGG: mex:Mext_1494 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: uroporphyrinogen decarboxylase (URO-D) YP_002420564.1 PFAM: NUDIX hydrolase; KEGG: mpo:Mpop_1495 NUDIX hydrolase YP_002420565.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1495 hypothetical protein YP_002420566.1 KEGG: mex:Mext_1496 hypothetical protein YP_002420567.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors YP_002420568.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine YP_002420569.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_1499 HAD family hydrolase YP_002420570.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_1500 regulatory protein TetR YP_002420571.1 Synthesizes thioester adducts of fatty acids enzymatically to the phosphopantetheine group of acyl carrier protein YP_002420572.1 PFAM: protein of unknown function DUF1044; KEGG: mex:Mext_1502 hypothetical protein YP_002420573.1 KEGG: mex:Mext_1503 DNA-binding protein YP_002420574.1 PFAM: DSBA oxidoreductase; KEGG: mex:Mext_1504 DsbA oxidoreductase YP_002420575.1 PFAM: rubrerythrin; protein of unknown function DUF125 transmembrane; KEGG: mex:Mext_1505 rubrerythrin YP_002420576.1 KEGG: mex:Mext_1506 carbonic anhydrase YP_002420577.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: mex:Mext_1507 molybdopterin biosynthesis MoaE protein YP_002420578.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_1508 hypothetical protein YP_002420579.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate YP_002420580.1 PFAM: von Willebrand factor A; SMART: von Willebrand factor type A; KEGG: mex:Mext_1510 von Willebrand factor A YP_002420581.1 KEGG: mpo:Mpop_1511 hypothetical protein YP_002420582.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: mex:Mext_1512 ATPase YP_002420583.1 KEGG: mpo:Mpop_1513 hypothetical protein YP_002420584.1 PFAM: hypothetical protein; KEGG: mex:Mext_1514 zinc finger SWIM domain-containing protein YP_002420585.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_002420586.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: mex:Mext_1516 addiction module antidote protein YP_002420587.1 PFAM: plasmid stabilization system; KEGG: mex:Mext_1517 plasmid stabilization system protein YP_002420588.1 PFAM: uracil-DNA glycosylase superfamily; KEGG: mex:Mext_1518 uracil-DNA glycosylase superfamily protein YP_002420589.1 KEGG: mex:Mext_1519 hypothetical protein YP_002420590.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase YP_002420591.1 PFAM: protein of unknown function DUF1330; KEGG: mex:Mext_1521 hypothetical protein YP_002420592.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_1522 regulatory protein TetR YP_002420593.1 KEGG: mex:Mext_1523 hypothetical protein YP_002420594.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: mex:Mext_1524 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_002420595.1 KEGG: mex:Mext_1525 NUDIX hydrolase YP_002420596.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_1525 NUDIX hydrolase YP_002420597.1 PFAM: carbonic anhydrase; KEGG: mex:Mext_1526 carbonate dehydratase YP_002420598.1 PFAM: inositol monophosphatase; KEGG: mex:Mext_1527 inositol monophosphatase YP_002420599.1 KEGG: mex:Mext_1528 hypothetical protein YP_002420600.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: mex:Mext_1529 ATPase domain-containing protein YP_002420601.1 PFAM: CheW domain protein; KEGG: mex:Mext_1530 CheW domain-containing protein YP_002420602.1 PFAM: response regulator receiver; KEGG: mex:Mext_1531 response regulator receiver YP_002420603.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: mex:Mext_1532 protein-glutamate methylesterase YP_002420604.1 PFAM: MCP methyltransferase CheR-type; KEGG: mex:Mext_1533 protein-glutamate O-methyltransferase YP_002420605.1 PFAM: allophanate hydrolase subunit 1; KEGG: mex:Mext_1534 allophanate hydrolase subunit 1 YP_002420606.1 KEGG: mex:Mext_1535 UreA amidolyase related protein; TIGRFAM: urea amidolyase related protein; PFAM: allophanate hydrolase subunit 2 YP_002420607.1 KEGG: mex:Mext_1536 UV damage repair endonuclease YP_002420608.1 KEGG: mex:Mext_1537 hypothetical protein YP_002420609.1 PFAM: Hypoxia induced protein conserved region; KEGG: mex:Mext_1538 hypoxia induced protein region YP_002420610.1 KEGG: mex:Mext_1539 hypothetical protein YP_002420611.1 KEGG: mex:Mext_1540 hypothetical protein YP_002420612.1 TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: mex:Mext_1541 ATP--cobalamin adenosyltransferase YP_002420613.1 PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: mex:Mext_1542 electron transfer flavoprotein alpha/beta-subunit YP_002420614.1 PFAM: electron transfer flavoprotein alpha/beta-subunit ; electron transfer flavoprotein subunit alpha; KEGG: mex:Mext_1543 electron transfer flavoprotein subunit alpha YP_002420615.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: mex:Mext_1544 3-hydroxybutyryl-CoA dehydrogenase YP_002420616.1 KEGG: mex:Mext_1545 hypothetical protein YP_002420617.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_1546 PIG3 family NAD(P)H quinone oxidoreductase YP_002420618.1 KEGG: mex:Mext_1547 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_002420619.1 KEGG: mex:Mext_1549 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_002420620.1 PFAM: glycosyl transferase family 20; KEGG: mex:Mext_1550 alpha,alpha-trehalose-phosphate synthase (UDP-forming) YP_002420621.1 KEGG: mex:Mext_1551 hypothetical protein YP_002420622.1 PFAM: protein of unknown function DUF1469; KEGG: mex:Mext_1552 hypothetical protein YP_002420623.1 KEGG: mex:Mext_1553 hypothetical protein YP_002420624.1 KEGG: mex:Mext_1554 hypothetical protein YP_002420625.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_002420626.1 TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: mex:Mext_1556 export-related chaperone CsaA YP_002420627.1 KEGG: mex:Mext_1557 hypothetical protein YP_002420628.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1558 major facilitator transporter YP_002420629.1 TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; KEGG: mex:Mext_1559 protein-export protein SecB YP_002420630.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: mex:Mext_1560 import inner membrane translocase subunit Tim44 YP_002420631.1 PFAM: MltA domain protein; 3D domain protein; KEGG: mex:Mext_1561 MltA domain-containing protein YP_002420632.1 PFAM: Smr protein/MutS2; KEGG: mex:Mext_1562 Smr protein/MutS2 YP_002420633.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_002420634.1 catalyzes the formation of acetate from pyruvate YP_002420635.1 KEGG: mex:Mext_1565 hypothetical protein YP_002420636.1 PFAM: integral membrane protein TerC; KEGG: mex:Mext_1566 integral membrane protein TerC YP_002420637.1 similar to YegS from E. coli YP_002420638.1 KEGG: mex:Mext_1568 hypothetical protein YP_002420639.1 KEGG: mex:Mext_1569 hypothetical protein YP_002420640.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: mex:Mext_1570 acid phosphatase YP_002420641.1 KEGG: mpo:Mpop_1668 hypothetical protein YP_002420642.1 KEGG: mex:Mext_1572 helix-turn-helix domain-containing protein YP_002420643.1 KEGG: mex:Mext_1573 RelE-like cytotoxic translational repressor of toxin-antitoxin stability system YP_002420644.1 KEGG: mex:Mext_1574 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; PFAM: transferase YP_002420645.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_1575 cyclic nucleotide-binding YP_002420646.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_1576 response regulator receiver YP_002420647.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_1577 hypothetical protein YP_002420648.1 PFAM: alanine racemase domain protein; KEGG: mex:Mext_1578 alanine racemase domain-containing protein YP_002420649.1 TIGRFAM: leucyl-tRNA synthetase; KEGG: mex:Mext_1579 leucyl-tRNA synthetase YP_002420650.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE YP_002420651.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; KEGG: mex:Mext_1581 PAS sensor protein YP_002420652.1 KEGG: mex:Mext_1582 hypothetical protein YP_002420653.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_002420654.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: mex:Mext_1584 methyltransferase GidB YP_002420655.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: mex:Mext_1585 cobyrinic acid ac-diamide synthase YP_002420656.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: mex:Mext_1586 ParB-like partition protein YP_002420657.1 required for the assembly and function of the DNAX complex which are required for the assembly of the subunit beta onto primed DNA YP_002420658.1 KEGG: mex:Mext_1588 hypothetical protein YP_002420659.1 KEGG: mex:Mext_1589 hypothetical protein YP_002420660.1 KEGG: mex:Mext_1590 hypothetical protein YP_002420661.1 KEGG: lch:Lcho_2218 hypothetical protein YP_002420662.1 KEGG: rle:pRL70167 hypothetical protein YP_002420663.1 KEGG: mex:Mext_1591 hypothetical protein YP_002420664.1 PFAM: prephenate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mex:Mext_1592 prephenate dehydrogenase YP_002420665.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_002420666.1 KEGG: mex:Mext_1594 hypothetical protein YP_002420667.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1595 TonB-dependent siderophore receptor YP_002420668.1 PFAM: K potassium transporter; KEGG: mex:Mext_1596 K potassium transporter YP_002420669.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_002420670.1 PFAM: patatin; KEGG: mex:Mext_1598 patatin YP_002420671.1 PFAM: regulatory protein ArsR; UbiE/COQ5 methyltransferase; methyltransferase small; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_1599 methyltransferase type 11 YP_002420672.1 KEGG: mex:Mext_1600 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_002420673.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity YP_002420674.1 KEGG: mex:Mext_1602 hypothetical protein YP_002420675.1 KEGG: mex:Mext_1603 acyl-CoA N-acyltransferase related protein YP_002420676.1 PFAM: polysaccharide deacetylase; KEGG: mex:Mext_1604 polysaccharide deacetylase YP_002420677.1 KEGG: mex:Mext_1605 hypothetical protein YP_002420678.1 KEGG: mex:Mext_1606 hypothetical protein YP_002420679.1 PFAM: cytochrome oxidase assembly; KEGG: mex:Mext_1607 cytochrome oxidase assembly YP_002420680.1 PFAM: Hly-III family protein; KEGG: mex:Mext_1608 Hly-III family protein YP_002420681.1 KEGG: mpo:Mpop_1630 hypothetical protein YP_002420682.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_002420683.1 KEGG: mex:Mext_1611 hypothetical protein YP_002420684.1 PFAM: flagellar FlaF family protein; KEGG: mex:Mext_1612 flagellar FlaF family protein YP_002420685.1 KEGG: mex:Mext_1613 hypothetical protein YP_002420686.1 KEGG: mpo:Mpop_1623 hypothetical protein YP_002420687.1 KEGG: mex:Mext_1614 hypothetical protein YP_002420688.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_1615 metallophosphoesterase YP_002420689.1 TIGRFAM: TonB family protein; KEGG: mex:Mext_1616 TonB family protein YP_002420690.1 TIGRFAM: protein TolR; PFAM: biopolymertransporter ExbD/TolR; KEGG: mex:Mext_1617 protein TolR YP_002420691.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mex:Mext_1618 MotA/TolQ/ExbB proton channel YP_002420692.1 KEGG: mex:Mext_1619 hypothetical protein YP_002420693.1 PFAM: heat shock protein Hsp20; KEGG: mex:Mext_1620 heat shock protein HSP20 YP_002420694.1 PFAM: protein of unknown function DUF1150; KEGG: mex:Mext_1621 hypothetical protein YP_002420695.1 KEGG: mex:Mext_1622 hypothetical protein YP_002420696.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1623 glycosyl transferase group 1 YP_002420697.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits YP_002420698.1 PFAM: amylo-alpha-16-glucosidase; KEGG: mex:Mext_1625 amylo-alpha-16-glucosidase YP_002420699.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1626 glycosyl transferase group 1 YP_002420700.1 PFAM: ribosomal protein L35; KEGG: mex:Mext_1627 50S ribosomal protein L35 YP_002420701.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_002420702.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_002420703.1 KEGG: mex:Mext_1630 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase subunit beta YP_002420704.1 PFAM: SEC-C motif domain protein; KEGG: mex:Mext_1631 SecC motif-containing protein YP_002420705.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: mex:Mext_1632 UBA/ThiF-type NAD/FAD binding protein YP_002420706.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica. YP_002420707.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_002420708.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: mex:Mext_1635 methionyl-tRNA formyltransferase YP_002420709.1 KEGG: mex:Mext_1636 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_002420710.1 KEGG: mex:Mext_1637 hypothetical protein YP_002420711.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_002420712.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP YP_002420713.1 TIGRFAM:radical SAM protein; PFAM: radical SAM domain protein; KEGG: mex:Mext_1640 radical SAM protein YP_002420714.1 PFAM: shikimate kinase; 3-dehydroquinate synthase; KEGG: mex:Mext_1641 shikimate kinase, 3-dehydroquinate synthase YP_002420715.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_1642 regulatory protein TetR YP_002420716.1 TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: lactate/malate dehydrogenase; KEGG: mex:Mext_1643 malate dehydrogenase, NAD-dependent YP_002420717.1 KEGG: mex:Mext_1644 succinyl-CoA synthetase, beta subunit; TIGRFAM: succinyl-CoA synthetase subunit beta; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein YP_002420718.1 TIGRFAM: succinyl-CoA synthetase, subunit alpha; PFAM: CoA-binding protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: mex:Mext_1645 succinyl-CoA synthetase, subunit alpha YP_002420719.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_002420720.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: mex:Mext_1647 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_002420721.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide YP_002420722.1 KEGG: mex:Mext_1649 histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002420723.1 KEGG: mex:Mext_1650 hypothetical protein YP_002420724.1 PFAM: sarcosine oxidase subunit gamma; KEGG: mex:Mext_1651 sarcosine oxidase subunit gamma YP_002420725.1 TIGRFAM: sarcosine oxidase subunit alpha family; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: mex:Mext_1652 sarcosine oxidase subunit alpha family protein YP_002420726.1 PFAM: sarcosine oxidase subunit delta heterotetrameric; KEGG: mex:Mext_1653 sarcosine oxidase subunit delta heterotetrameric YP_002420727.1 TIGRFAM: sarcosine oxidase subunit beta family; PFAM: FAD dependent oxidoreductase; KEGG: mex:Mext_1654 sarcosine oxidase subunit beta family protein YP_002420728.1 PFAM: ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_1655 ThiJ/PfpI domain-containing protein YP_002420729.1 PFAM: glutamine amidotransferase class-II; KEGG: mex:Mext_1656 glutamine amidotransferase class-II YP_002420730.1 PFAM: glutamate synthase subunit alpha domain protein; KEGG: mex:Mext_1657 glutamate synthase subunit alpha YP_002420731.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: mex:Mext_1658 ferredoxin-dependent glutamate synthase YP_002420732.1 TIGRFAM: glutamine synthetaseII; PFAM: glutamine synthetase catalytic region; KEGG: mex:Mext_1659 glutamine synthetase, type III YP_002420733.1 KEGG: mex:Mext_1660 hypothetical protein YP_002420734.1 KEGG: mpo:Mpop_0195 hypothetical protein YP_002420738.1 KEGG: mrd:Mrad2831_5308 hypothetical protein YP_002420739.1 KEGG: mrd:Mrad2831_2658 hypothetical protein YP_002420740.1 PFAM: protein of unknown function DUF1311; KEGG: bcm:Bcenmc03_7075 lipoprotein-like protein YP_002420741.1 PFAM: cell wall hydrolase/autolysin; KEGG: mag:amb4081 N-acetylmuramoyl-L-alanine amidase YP_002420742.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: cti:pRALTA_0502 transposase, IS110 family YP_002420743.1 KEGG: bbt:BBta_5464 caspase domain-containing protein YP_002420744.1 KEGG: dsh:Dshi_0899 hypothetical protein YP_002420745.1 KEGG: mlo:mll9170 virulence factor SrfC-like protein YP_002420746.1 PFAM: virulence protein SrfB; KEGG: mlo:mll9171 virulence factor SrfB-like protein YP_002420747.1 KEGG: rde:RD1_1019 hypothetical protein YP_002420748.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: dsh:Dshi_0895 peptidase S1 and S6 chymotrypsin/Hap YP_002420749.1 KEGG: nwi:Nwi_1274 peptidase C14, caspase catalytic subunit P20 YP_002420751.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: Animal peptidoglycan recognition protein PGRP; KEGG: aoe:Clos_0160 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_002420753.1 TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: mrd:Mrad2831_5167 P4 family phage/plasmid primase YP_002420755.1 KEGG: mrd:Mrad2831_5164 hypothetical protein YP_002420756.1 KEGG: mrd:Mrad2831_5192 hypothetical protein YP_002420757.1 PFAM: Hemolysin-type calcium-binding region; Animal haem peroxidase; KEGG: mex:Mext_1662 heme peroxidase YP_002420758.1 KEGG: mex:Mext_1663 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_002420759.1 KEGG: mex:Mext_1664 hemolysin-type calcium-binding region YP_002420760.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD; KEGG: mex:Mext_1665 HlyD family type I secretion membrane fusion protein YP_002420761.1 KEGG: mex:Mext_1666 hypothetical protein YP_002420762.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mex:Mext_1667 ATPase domain-containing protein YP_002420763.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mex:Mext_1668 response regulator receiver YP_002420764.1 KEGG: mex:Mext_1669 esterase/lipase-like protein YP_002420765.1 PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_1670 methyltransferase type 11 YP_002420766.1 PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1671 histidine kinase YP_002420767.1 KEGG: mex:Mext_1672 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; SMART: PAC repeat-containing protein YP_002420768.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; TrkA-N domain protein; NmrA family protein; KEGG: mex:Mext_1673 NmrA family protein YP_002420769.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1674 LysR substrate-binding YP_002420770.1 PFAM: monooxygenase; KEGG: mex:Mext_1675 luciferase family protein YP_002420771.1 PFAM: DoxX family protein; KEGG: mex:Mext_1676 DoxX family protein YP_002420772.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1677 LysR substrate-binding YP_002420773.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1678 isochorismatase hydrolase YP_002420774.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_1679 alcohol dehydrogenase YP_002420775.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1680 LysR substrate-binding YP_002420776.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_1681 glyoxalase/bleomycin resistance protein/dioxygenase YP_002420777.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_1682 ErfK/YbiS/YcfS/YnhG family protein YP_002420778.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1683 LysR substrate-binding YP_002420779.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: mex:Mext_1684 antibiotic biosynthesis monooxygenase YP_002420780.1 PFAM: cupin; KEGG: mex:Mext_1685 cupin 2 domain-containing protein YP_002420781.1 KEGG: mex:Mext_1687 zinc-binding alcohol dehydrogenase family protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein YP_002420782.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_1688 hypothetical protein YP_002420783.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_1689 diguanylate cyclase YP_002420784.1 TIGRFAM: autotransporter-associated beta strand repeat protein; PFAM: amidase; KEGG: mex:Mext_1690 beta strand repeat-containing protein YP_002420785.1 TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: mex:Mext_1691 xanthine permease YP_002420786.1 KEGG: mex:Mext_1692 hypothetical protein YP_002420787.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_002420788.1 KEGG: mex:Mext_1694 hypothetical protein YP_002420789.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1695 isochorismatase hydrolase YP_002420790.1 KEGG: mex:Mext_1696 signal peptide YP_002420791.1 catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway. YP_002420792.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1698 ABC transporter YP_002420793.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_1699 inner-membrane translocator YP_002420794.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_1700 inner-membrane translocator YP_002420795.1 PFAM: basic membrane lipoprotein; KEGG: mex:Mext_1701 basic membrane lipoprotein YP_002420796.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_1702 inner-membrane translocator YP_002420797.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_1703 inner-membrane translocator YP_002420798.1 formamide amidohydrolase; catalyzes the hydrolysis of formamide to formate YP_002420799.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1705 isochorismatase hydrolase YP_002420800.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1706 ABC transporter YP_002420801.1 PFAM: protein of unknown function DUF81; KEGG: mex:Mext_1707 hypothetical protein YP_002420802.1 PFAM: basic membrane lipoprotein; KEGG: mex:Mext_1708 basic membrane lipoprotein YP_002420803.1 KEGG: mex:Mext_1709 hypothetical protein YP_002420804.1 KEGG: mex:Mext_1710 hypothetical protein YP_002420805.1 PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: mex:Mext_1711 peptidase S15 YP_002420806.1 PFAM: creatininase; KEGG: mex:Mext_1712 creatininase YP_002420807.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_1713 AMP-dependent synthetase and ligase YP_002420808.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mex:Mext_1714 NAD(P)H dehydrogenase (quinone) YP_002420809.1 PFAM: FAD linked oxidase; KEGG: mex:Mext_1715 FAD linked oxidase domain-containing protein YP_002420810.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: mex:Mext_1716 2OG-Fe(II) oxygenase YP_002420811.1 PFAM: NMT1/THI5 like domain protein; KEGG: mex:Mext_1717 NMT1/THI5-like domain-containing protein YP_002420812.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mex:Mext_1718 Rieske (2Fe-2S) domain-containing protein YP_002420813.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1719 binding-protein-dependent transport systems inner membrane component YP_002420814.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1720 ABC transporter YP_002420815.1 PFAM: NMT1/THI5 like domain protein; KEGG: mex:Mext_1721 NMT1/THI5-like domain-containing protein YP_002420816.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1722 LysR substrate-binding YP_002420817.1 Catalyzes the deamination of cytosine to uracil and ammonia YP_002420818.1 KEGG: mex:Mext_1724 hypothetical protein YP_002420819.1 KEGG: mex:Mext_1725 hypothetical protein YP_002420820.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1726 LysR substrate-binding YP_002420821.1 TIGRFAM: guanine deaminase; PFAM: amidohydrolase; amidohydrolase; KEGG: mex:Mext_1727 guanine deaminase YP_002420822.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_1728 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_002420823.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mex:Mext_1729 molybdopterin dehydrogenase FAD-binding YP_002420824.1 PFAM: NMT1/THI5 like domain protein; KEGG: mex:Mext_1730 NMT1/THI5-like domain-containing protein YP_002420825.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1731 binding-protein-dependent transport systems inner membrane component YP_002420826.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1732 binding-protein-dependent transport systems inner membrane component YP_002420827.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1733 ABC transporter YP_002420828.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: mex:Mext_1734 flavin reductase domain-containing protein YP_002420829.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_1735 alpha/beta hydrolase fold YP_002420830.1 PFAM: endoribonuclease L-PSP; KEGG: mex:Mext_1736 endoribonuclease L-PSP YP_002420831.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1737 isochorismatase hydrolase YP_002420832.1 PFAM: monooxygenase; KEGG: mex:Mext_1738 luciferase family protein YP_002420833.1 PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: mex:Mext_1739 tetracycline transcriptional regulator YcdC domain-containing protein YP_002420834.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate YP_002420835.1 TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: mex:Mext_1741 hypothetical protein YP_002420836.1 PFAM: protein of unknown function DUF989; KEGG: mex:Mext_1742 hypothetical protein YP_002420837.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1743 carbonate dehydratase YP_002420838.1 KEGG: mex:Mext_1744 urate catabolism protein; TIGRFAM: OHCU decarboxylase; urate catabolism protein; PFAM: polysaccharide deacetylase YP_002420839.1 TIGRFAM: hydroxyisourate hydrolase; PFAM: transthyretin; KEGG: mex:Mext_1745 hydroxyisourate hydrolase YP_002420840.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mpo:Mpop_1232 (2Fe-2S)-binding domain protein YP_002420841.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; molybdopterin dehydrogenase FAD-binding; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mpo:Mpop_1233 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_002420842.1 KEGG: mpo:Mpop_1234 hypothetical protein YP_002420843.1 PFAM: amidohydrolase; amidohydrolase; KEGG: mpo:Mpop_1235 amidohydrolase YP_002420844.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: mpo:Mpop_1236 glucose-methanol-choline oxidoreductase YP_002420845.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: mpo:Mpop_1237 thiamine pyrophosphate protein domain protein TPP-binding YP_002420846.1 KEGG: mpo:Mpop_1238 sulfopyruvate decarboxylase YP_002420847.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpo:Mpop_1239 LysR family transcriptional regulator YP_002420848.1 PFAM: glutathione S-transferase domain; KEGG: mpo:Mpop_1240 glutathione S-transferase domain YP_002420849.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mpo:Mpop_1241 Rieske (2Fe-2S) domain protein YP_002420850.1 KEGG: mpo:Mpop_1242 hypothetical protein YP_002420851.1 PFAM: basic membrane lipoprotein; KEGG: mpo:Mpop_1243 basic membrane lipoprotein YP_002420852.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mpo:Mpop_1244 ABC transporter YP_002420853.1 PFAM: inner-membrane translocator; KEGG: mpo:Mpop_1245 inner-membrane translocator YP_002420854.1 PFAM: inner-membrane translocator; KEGG: mpo:Mpop_1246 inner-membrane translocator YP_002420855.1 PFAM: amidohydrolase; amidohydrolase; KEGG: mpo:Mpop_1247 amidohydrolase YP_002420856.1 KEGG: mpo:Mpop_1248 hypothetical protein YP_002420857.1 PFAM: protein of unknown function DUF808; KEGG: mex:Mext_1746 hypothetical protein YP_002420858.1 PFAM: EAL domain protein; KEGG: mex:Mext_1747 EAL domain-containing protein YP_002420859.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_1748 diguanylate cyclase YP_002420860.1 PFAM: OmpW family protein; KEGG: mex:Mext_1749 OmpW family protein YP_002420861.1 KEGG: mex:Mext_1750 hypothetical protein YP_002420862.1 KEGG: mex:Mext_1751 hypothetical protein YP_002420863.1 KEGG: mex:Mext_1752 hypothetical protein YP_002420864.1 KEGG: mex:Mext_1753 hypothetical protein YP_002420865.1 KEGG: mex:Mext_1754 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_002420866.1 PFAM: aminoglycoside phosphotransferase; KEGG: mex:Mext_1755 aminoglycoside phosphotransferase YP_002420867.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mex:Mext_1756 phospholipid/glycerol acyltransferase YP_002420868.1 PFAM: protein of unknown function DUF497; KEGG: mex:Mext_1757 hypothetical protein YP_002420869.1 KEGG: mex:Mext_1758 hypothetical protein YP_002420870.1 TIGRFAM: methionine biosynthesis protein MetW; PFAM: methionine biosynthesis MetW protein; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_1759 methionine biosynthesis protein MetW YP_002420871.1 KEGG: mex:Mext_1760 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold YP_002420872.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: methionine sulfoxide reductase B; KEGG: mex:Mext_1761 methionine-R-sulfoxide reductase YP_002420873.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A; KEGG: mex:Mext_1762 peptide methionine sulfoxide reductase YP_002420874.1 TIGRFAM: bacterioferritin; PFAM: rubrerythrin; Ferritin Dps family protein; KEGG: mex:Mext_1763 bacterioferritin YP_002420875.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mex:Mext_1764 hypothetical protein YP_002420876.1 PFAM: UspA domain protein; KEGG: mex:Mext_1765 UspA domain-containing protein YP_002420877.1 PFAM: acyltransferase 3; KEGG: mex:Mext_1766 acyltransferase 3 YP_002420878.1 KEGG: mex:Mext_1767 hypothetical protein YP_002420879.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_1768 radical SAM domain-containing protein YP_002420880.1 KEGG: mex:Mext_1769 hypothetical protein YP_002420881.1 KEGG: mex:Mext_1770 hypothetical protein YP_002420882.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif YP_002420883.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_002420884.1 PFAM: thioredoxin domain; KEGG: mex:Mext_1773 thioredoxin domain-containing protein YP_002420885.1 KEGG: mex:Mext_1774 rhodanese YP_002420886.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: mex:Mext_1775 sulphur oxidation protein SoxZ YP_002420887.1 PFAM: beta-lactamase; KEGG: mex:Mext_1776 beta-lactamase domain-containing protein YP_002420888.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_1777 regulatory protein TetR YP_002420889.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_1778 cobalamin synthesis protein P47K YP_002420891.1 KEGG: mex:Mext_1780 hypothetical protein YP_002420892.1 KEGG: mex:Mext_1781 hypothetical protein YP_002420893.1 KEGG: mex:Mext_1782 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002420894.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: mex:Mext_1783 protein of unknown function DUF463 YcjX family protein YP_002420895.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1784 hypothetical protein YP_002420896.1 KEGG: mex:Mext_1785 hypothetical protein YP_002420897.1 PFAM: protein of unknown function DUF1234; KEGG: mex:Mext_1786 hypothetical protein YP_002420898.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mex:Mext_1787 diaminopimelate decarboxylase YP_002420899.1 KEGG: mex:Mext_1788 hypothetical protein YP_002420900.1 KEGG: mex:Mext_1789 hypothetical protein YP_002420901.1 KEGG: mex:Mext_1790 hypothetical protein YP_002420902.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1791 hypothetical protein YP_002420903.1 PFAM: ribonuclease HII/HIII; KEGG: mex:Mext_1792 ribonuclease H YP_002420904.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1793 glycosyl transferase group 1 YP_002420905.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_1794 metallophosphoesterase YP_002420906.1 PFAM: aminotransferase class V; KEGG: mex:Mext_1795 serine--glyoxylate transaminase YP_002420907.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_1796 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_002420908.1 PFAM: methylene-tetrahydromethanopterin dehydrogenase; KEGG: mex:Mext_1797 methylenetetrahydrofolate dehydrogenase (NADP(+)) YP_002420909.1 PFAM: formiminotransferase-cyclodeaminase; KEGG: mex:Mext_1798 formiminotransferase-cyclodeaminase YP_002420910.1 catalyzes the formation of malyl-CoA from malate and CoA YP_002420911.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle YP_002420912.1 PFAM: phosphoenolpyruvate carboxylase; KEGG: mex:Mext_1801 phosphoenolpyruvate carboxylase YP_002420913.1 PFAM: HpcH/HpaI aldolase; KEGG: mex:Mext_1802 citrate (pro-3S)-lyase YP_002420914.1 PFAM: protein of unknown function DUF1003; KEGG: mex:Mext_1803 hypothetical protein YP_002420915.1 PFAM: dienelactone hydrolase; KEGG: mex:Mext_1804 carboxymethylenebutenolidase YP_002420916.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: mpo:Mpop_1757 transcriptional coactivator/pterin dehydratase YP_002420917.1 KEGG: mex:Mext_1806 ABC transporter periplasmic solute-binding protein YP_002420918.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1807 binding-protein-dependent transport systems inner membrane component YP_002420919.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1808 ABC transporter YP_002420920.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: pyrrolo-quinoline quinone; KEGG: mex:Mext_1809 methanol/ethanol family PQQ-dependent dehydrogenase YP_002420921.1 KEGG: mex:Mext_1810 hypothetical protein YP_002420922.1 PFAM: extracellular solute-binding protein family 3; KEGG: mex:Mext_1811 extracellular solute-binding protein YP_002420923.1 KEGG: mex:Mext_1812 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_002420924.1 TIGRFAM: dihydroneopterin aldolase; KEGG: mex:Mext_1813 dihydroneopterin aldolase YP_002420925.1 KEGG: mex:Mext_1814 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_002420926.1 KEGG: mpo:Mpop_1767 hypothetical protein YP_002420927.1 KEGG: mex:Mext_1816 hypothetical protein YP_002420928.1 TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: radical SAM protein; KEGG: mex:Mext_1817 pyrroloquinoline quinone biosynthesis protein PqqE YP_002420929.1 Required in the synthesis of PPQ, but its exact function is unknown YP_002420930.1 possibly involved in transport of pyrroloquinoline quinone transport YP_002420931.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_1821 response regulator receiver YP_002420932.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1822 ATPase domain-containing protein YP_002420933.1 KEGG: mex:Mext_1823 hypothetical protein YP_002420934.1 TIGRFAM: formylmethanofuran dehydrogenase subunit C; PFAM: glutamate synthase subunit alpha domain protein; KEGG: mex:Mext_1824 formylmethanofuran dehydrogenase subunit C YP_002420935.1 catalyzes the transfer of a formyl group from formylmethanofuran to tetrahydromethanopterin tetrahydromethanopterin YP_002420936.1 TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: amidohydrolase; KEGG: mex:Mext_1826 formylmethanofuran dehydrogenase subunit A YP_002420937.1 KEGG: mex:Mext_1827 tungsten-containing formylmethanofuran dehydrogenase, subunit B YP_002420938.1 TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: mex:Mext_1828 beta-ribofuranosylaminobenzene 5'-phosphate synthase YP_002420939.1 PFAM: methylene-tetrahydromethanopterin dehydrogenase; KEGG: mex:Mext_1829 methylene-tetrahydromethanopterin dehydrogenase YP_002420940.1 PFAM: protein of unknown function DUF201; KEGG: mex:Mext_1830 hypothetical protein YP_002420941.1 catalyzes the reversible formation of methenyl-H(4)methanopterin from N(5)-formyl-H(4)methanopterin YP_002420942.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: mex:Mext_1832 alpha-L-glutamate ligase YP_002420943.1 PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: mex:Mext_1833 triphosphoribosyl-dephospho-CoA protein YP_002420944.1 TIGRFAM: formaldehyde-activating enzyme; PFAM: formaldehyde-activating enzyme (Fae); KEGG: mex:Mext_1834 formaldehyde-activating enzyme YP_002420945.1 PFAM: histidine biosynthesis protein; KEGG: mex:Mext_1835 histidine biosynthesis protein YP_002420946.1 TIGRFAM: H4MPT-linked C1 transfer pathway protein; PFAM: hydantoinase/oxoprolinase; KEGG: mex:Mext_1836 H4MPT-linked C1 transfer pathway protein YP_002420947.1 KEGG: mex:Mext_1837 hypothetical protein YP_002420948.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein; KEGG: mex:Mext_1838 YVTN beta-propeller repeat-containing protein YP_002420949.1 KEGG: mex:Mext_1839 signal peptide YP_002420950.1 KEGG: mex:Mext_1840 hypothetical protein YP_002420951.1 PFAM: protein of unknown function DUF447; KEGG: mex:Mext_1841 hypothetical protein YP_002420952.1 PFAM: dihydropteroate synthase DHPS; KEGG: mex:Mext_1842 dihydropteroate synthase DhpS YP_002420953.1 PFAM: aspartate/glutamate/uridylate kinase; KEGG: mex:Mext_1843 aspartate/glutamate/uridylate kinase YP_002420954.1 PFAM: protein of unknown function DUF556; KEGG: mex:Mext_1844 hypothetical protein YP_002420955.1 KEGG: mex:Mext_1845 hypothetical protein YP_002420956.1 KEGG: mex:Mext_1846 hypothetical protein YP_002420957.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mex:Mext_1847 YVTN beta-propeller repeat-containing protein YP_002420958.1 KEGG: mex:Mext_1848 hypothetical protein YP_002420959.1 KEGG: mex:Mext_1849 hypothetical protein YP_002420960.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1850 ABC transporter YP_002420961.1 PFAM: ABC transporter; KEGG: mex:Mext_1851 ABC-2 type transporter YP_002420962.1 KEGG: mex:Mext_1852 hypothetical protein YP_002420963.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1853 TonB-dependent receptor YP_002420964.1 KEGG: mex:Mext_1854 hypothetical protein YP_002420965.1 KEGG: mex:Mext_1855 hypothetical protein YP_002420966.1 KEGG: mex:Mext_1856 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_002420967.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1857 glycosyl transferase group 1 YP_002420968.1 PFAM: polysaccharide export protein; KEGG: mex:Mext_1858 polysaccharide export protein YP_002420969.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: mex:Mext_1859 lipopolysaccharide biosynthesis protein YP_002420970.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1860 hypothetical protein YP_002420971.1 KEGG: mex:Mext_1861 DNA polymerase III subunits gamma and tau; TIGRFAM: DNA polymerase III subunits gamma and tau; PFAM: ATPase AAA central domain protein; SMART: ATPase AAA YP_002420972.1 KEGG: mex:Mext_1862 hypothetical protein YP_002420973.1 KEGG: mex:Mext_1863 hypothetical protein YP_002420974.1 KEGG: mpo:Mpop_1815 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_002420975.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_1924 glutathione S-transferase domain-containing protein YP_002420976.1 PFAM: hypothetical protein; KEGG: mex:Mext_1925 hypothetical protein YP_002420977.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1926 ATPase domain-containing protein YP_002420978.1 KEGG: mex:Mext_1927 hypothetical protein YP_002420979.1 PFAM: cysteine peptidase; KEGG: mex:Mext_1928 cysteine peptidase YP_002420980.1 PFAM: thioesterase superfamily protein; KEGG: mex:Mext_1929 thioesterase superfamily protein YP_002420981.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: mex:Mext_1930 alpha/beta hydrolase domain-containing protein YP_002420982.1 PFAM: sporulation domain protein; lytic transglycosylase catalytic; KEGG: mex:Mext_1931 lytic transglycosylase catalytic YP_002420983.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mex:Mext_1932 molybdopterin oxidoreductase YP_002420984.1 PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1933 ABC transporter related YP_002420985.1 KEGG: mex:Mext_1934 phosphopentomutase; TIGRFAM: phosphopentomutase; PFAM: metalloenzyme domain protein; phosphopentomutase domain protein YP_002420986.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence YP_002420987.1 KEGG: mex:Mext_1936 hypothetical protein YP_002420988.1 PFAM: DNA/RNA non-specific endonuclease; KEGG: mex:Mext_1937 DNA/RNA non-specific endonuclease YP_002420989.1 KEGG: mex:Mext_1938 hypothetical protein YP_002420990.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_002420991.1 TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_1940 hopanoid-associated sugar epimerase YP_002420992.1 TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: mex:Mext_1941 squalene synthase HpnC YP_002420993.1 TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: mex:Mext_1942 squalene synthase HpnD YP_002420994.1 TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; KEGG: mex:Mext_1943 squalene-associated FAD-dependent desaturase YP_002420995.1 KEGG: mex:Mext_1944 squalene-hopene cyclase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: prenyltransferase/squalene oxidase YP_002420996.1 KEGG: mex:Mext_1945 hypothetical protein YP_002420997.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class I and II; aminotransferase class-III; KEGG: mex:Mext_1946 8-amino-7-oxononanoate synthase YP_002420998.1 PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KR domain protein; beta-ketoacyl synthase ; acyl transferase; KEGG: mex:Mext_1947 beta-ketoacyl synthase YP_002420999.1 KEGG: mex:Mext_1948 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_002421000.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1949 glycosyl transferase YP_002421001.1 KEGG: mex:Mext_1950 hypothetical protein YP_002421002.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1951 major facilitator transporter YP_002421003.1 PFAM: ethanolamine ammonia lyase large subunit; KEGG: mex:Mext_1952 ethanolamine ammonia lyase large subunit YP_002421004.1 PFAM: ethanolamine ammonia-lyase light chain; KEGG: mex:Mext_1953 ethanolamine ammonia-lyase YP_002421005.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_002421006.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_1955 Sel1 domain-containing protein YP_002421007.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_1956 exodeoxyribonuclease III Xth YP_002421008.1 KEGG: mex:Mext_1957 hypothetical protein YP_002421009.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_1958 AMP-dependent synthetase and ligase YP_002421010.1 PFAM: protein of unknown function DUF465; KEGG: mex:Mext_1959 hypothetical protein YP_002421011.1 PFAM: protein of unknown function DUF465; KEGG: mex:Mext_1960 hypothetical protein YP_002421012.1 KEGG: mex:Mext_1961 hypothetical protein YP_002421013.1 KEGG: mex:Mext_1962 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_002421014.1 KEGG: mex:Mext_1963 phosphoribosylaminoimidazole carboxylase, ATPase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_002421015.1 PFAM: hypotheticalprotein; Tetratricopeptide TPR_2 repeat protein; SMART: hypothetical protein; KEGG: mex:Mext_1964 hypotheticalprotein YP_002421016.1 PFAM: response regulator receiver; KEGG: mex:Mext_1965 response regulator receiver YP_002421017.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese YP_002421018.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine YP_002421019.1 KEGG: mex:Mext_1968 hypothetical protein YP_002421020.1 KEGG: mex:Mext_1969 hypothetical protein YP_002421021.1 KEGG: mex:Mext_1970 hypothetical protein YP_002421022.1 PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: mex:Mext_1971 Na+ dependent nucleoside transporter YP_002421023.1 KEGG: mex:Mext_1972 hypothetical protein YP_002421025.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1973 glycosyl transferase group 1 YP_002421026.1 KEGG: mex:Mext_1974 DNA topoisomerase I YP_002421027.1 PFAM: chemotaxis sensory transducer; KEGG: mex:Mext_1975 chemotaxis sensory transducer YP_002421028.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: mex:Mext_1976 cytochrome bd ubiquinol oxidase subunit I YP_002421029.1 PFAM: regulatory protein LuxR; KEGG: mex:Mext_1977 regulatory protein LuxR YP_002421030.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: mex:Mext_1978 diguanylate cyclase YP_002421031.1 KEGG: mex:Mext_1979 hypothetical protein YP_002421032.1 KEGG: mex:Mext_1980 hypothetical protein YP_002421033.1 PFAM: iron permease FTR1; KEGG: mex:Mext_1981 iron permease FTR1 YP_002421034.1 PFAM: protein-tyrosine phosphatase, low molecular weight; KEGG: mex:Mext_1982 low molecular weight phosphotyrosine protein phosphatase YP_002421035.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1983 hypothetical protein YP_002421036.1 PFAM: histidinol dehydrogenase; KEGG: mex:Mext_1984 histidinol dehydrogenase YP_002421037.1 KEGG: mex:Mext_1985 hypothetical protein YP_002421038.1 KEGG: mex:Mext_1986 hypothetical protein YP_002421039.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_002421040.1 KEGG: mpo:Mpop_1943 hypothetical protein YP_002421041.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine YP_002421042.1 KEGG: mex:Mext_1990 hypothetical protein YP_002421043.1 KEGG: mex:Mext_1992 hypothetical protein YP_002421044.1 PFAM: PhnA protein; KEGG: mpo:Mpop_1948 PhnA protein YP_002421045.1 PFAM: beta-lactamase; KEGG: mex:Mext_1994 beta-lactamase domain-containing protein YP_002421046.1 PFAM: regulatory protein LuxR; KEGG: mex:Mext_1995 regulatory protein LuxR YP_002421047.1 KEGG: mex:Mext_1996 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II YP_002421048.1 KEGG: mex:Mext_1997 hypothetical protein YP_002421049.1 KEGG: mex:Mext_1998 hypothetical protein YP_002421050.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: mex:Mext_1999 hypothetical protein YP_002421051.1 Essential for recycling GMP and indirectly, cGMP YP_002421052.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: ATPase AAA; KEGG: mex:Mext_2001 ABC transporter related YP_002421053.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2002 ErfK/YbiS/YcfS/YnhG family protein YP_002421054.1 KEGG: mex:Mext_2003 cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase YP_002421055.1 KEGG: mex:Mext_2004 hypothetical protein YP_002421056.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2005 TonB-dependent siderophore receptor YP_002421057.1 KEGG: mex:Mext_2006 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase YP_002421058.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate YP_002421059.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers YP_002421060.1 PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_2010 carbohydrate-selective porin OprB YP_002421061.1 KEGG: mex:Mext_2011 hypothetical protein YP_002421062.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate YP_002421063.1 KEGG: mex:Mext_2013 hypothetical protein YP_002421064.1 PFAM: peptidase M48 Ste24p; KEGG: mex:Mext_2014 peptidase M48 Ste24p YP_002421065.1 KEGG: mex:Mext_2015 hypothetical protein YP_002421066.1 PFAM: protein of unknown function DUF898 transmembrane; KEGG: mex:Mext_2015 hypothetical protein YP_002421067.1 PFAM: protein of unknown function DUF466; KEGG: mex:Mext_2016 hypothetical protein YP_002421068.1 PFAM: carbon starvation protein CstA; KEGG: mex:Mext_2017 carbon starvation protein CstA YP_002421069.1 PFAM: protein of unknown function DUF477; KEGG: mex:Mext_2018 hypothetical protein YP_002421070.1 PFAM: protein of unknown function DUF477; KEGG: mex:Mext_2019 hypothetical protein YP_002421071.1 PFAM: LemA family protein; KEGG: mex:Mext_2020 LemA family protein YP_002421072.1 TIGRFAM: conserved hypothetical protein; PFAM: Selenoprotein W-related; KEGG: mex:Mext_2021 selenoprotein YP_002421073.1 KEGG: mex:Mext_2022 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002421074.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_2023 2,5-didehydrogluconate reductase YP_002421075.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_2024 cyclic nucleotide-binding YP_002421076.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose YP_002421077.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mpo:Mpop_1988 alpha amylase catalytic region YP_002421078.1 KEGG: mex:Mext_2028 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_002421079.1 KEGG: mex:Mext_2030 ferredoxin-NAD reductase component YP_002421080.1 KEGG: mex:Mext_2031 hypothetical protein YP_002421081.1 KEGG: mex:Mext_2032 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein YP_002421082.1 PFAM: glycosyl transferase family 4; KEGG: mex:Mext_2033 glycosyl transferase YP_002421083.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: mex:Mext_2034 NAD-dependent epimerase/dehydratase YP_002421084.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: mex:Mext_2035 NAD(P)H dehydrogenase (quinone) YP_002421085.1 PFAM: helix-turn-helix HxlR type; KEGG: mex:Mext_2036 helix-turn-helix HxlR type YP_002421086.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KR domain protein; KEGG: mex:Mext_2037 polysaccharide biosynthesis protein CapD YP_002421087.1 PFAM: protein of unknown function DUF1206; KEGG: mex:Mext_2038 hypothetical protein YP_002421088.1 KEGG: mex:Mext_2039 hypothetical protein YP_002421089.1 PFAM: protein of unknown function DUF820; KEGG: mex:Mext_2040 hypothetical protein YP_002421090.1 PFAM: homospermidine synthase; KEGG: mex:Mext_2042 homospermidine synthase YP_002421091.1 KEGG: mex:Mext_2043 hypothetical protein YP_002421092.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2044 GCN5-related N-acetyltransferase YP_002421093.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mex:Mext_2045 Orn/DAP/Arg decarboxylase 2 YP_002421094.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan YP_002421095.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2047 GCN5-related N-acetyltransferase YP_002421096.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mex:Mext_2048 NADH:flavin oxidoreductase/NADH oxidase YP_002421097.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: mex:Mext_2049 HAD family hydrolase YP_002421098.1 PFAM: SmpA/OmlA domain protein; KEGG: mex:Mext_2050 SmpA/OmlA domain-containing protein YP_002421099.1 KEGG: mex:Mext_2051 ubiquinol-cytochrome C chaperone YP_002421100.1 KEGG: mex:Mext_2052 hypothetical protein YP_002421101.1 TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: mex:Mext_2053 fatty acid/phospholipid synthesis protein PlsX YP_002421102.1 KEGG: mex:Mext_2054 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_002421103.1 PFAM: histone family protein DNA-binding protein; KEGG: mex:Mext_2055 histone family protein DNA-binding protein YP_002421104.1 PFAM: regulatory protein MerR; KEGG: mex:Mext_2056 regulatory protein MerR YP_002421105.1 KEGG: mex:Mext_2057 hypothetical protein YP_002421106.1 KEGG: mex:Mext_2058 hypothetical protein YP_002421107.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: mex:Mext_2059 serine protein kinase domain-containing protein YP_002421108.1 PFAM: protein of unknown function DUF444; KEGG: mex:Mext_2060 hypothetical protein YP_002421109.1 PFAM: SpoVR family protein; KEGG: mex:Mext_2061 hypothetical protein YP_002421110.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase; KEGG: mex:Mext_2062 phosphoribosylglycinamide formyltransferase YP_002421111.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_002421112.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_2065 hypothetical protein YP_002421113.1 KEGG: mex:Mext_2066 chromosomal replication initiator DnaA YP_002421114.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate YP_002421115.1 PFAM: Ppx/GppA phosphatase; KEGG: mex:Mext_2068 Ppx/GppA phosphatase YP_002421116.1 KEGG: mex:Mext_2069 hypothetical protein YP_002421117.1 PFAM: aminotransferase class I and II; KEGG: mex:Mext_2070 aminotransferase class I and II YP_002421118.1 PFAM: coenzyme A transferase; KEGG: mex:Mext_2071 coenzyme A transferase YP_002421119.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_2072 chemotaxis sensory transducer YP_002421120.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_002421121.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_002421122.1 TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: mex:Mext_2075 uridylate kinase YP_002421123.1 catalyzes the hydrolysis of pyrophosphate to phosphate YP_002421124.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2077 GCN5-related N-acetyltransferase YP_002421125.1 KEGG: mex:Mext_2078 hypothetical protein YP_002421126.1 KEGG: mex:Mext_2079 hypothetical protein YP_002421127.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis YP_002421128.1 TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: mex:Mext_2081 outer membrane protein assembly complex, YaeT protein YP_002421129.1 KEGG: mex:Mext_2082 membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein YP_002421130.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_002421131.1 PFAM: phosphatidate cytidylyltransferase; KEGG: mex:Mext_2084 phosphatidate cytidylyltransferase YP_002421132.1 KEGG: mex:Mext_2085 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_002421133.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_002421134.1 PFAM: CBS domain containing protein; HPP family protein; KEGG: mex:Mext_2087 HPP family protein? YP_002421135.1 KEGG: met:M446_6426 hypothetical protein YP_002421136.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mex:Mext_2088 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_002421137.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_2089 LysR substrate-binding YP_002421138.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_2090 short-chain dehydrogenase/reductase SDR YP_002421139.1 PFAM: transketolase; KEGG: mex:Mext_2091 transketolase domain-containing protein YP_002421140.1 PFAM: transketolase; transketolase domain protein; KEGG: mex:Mext_2092 transketolase YP_002421141.1 TIGRFAM: TRAP dicarboxylate transporter DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: mex:Mext_2093 TRAP dicarboxylate transporter DctP subunit YP_002421142.1 PFAM: tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transporter permease DctM subunit; KEGG: mex:Mext_2094 TRAP C4-dicarboxylate transporter permease DctM subunit YP_002421144.1 KEGG: mex:Mext_2095 hypothetical protein YP_002421145.1 PFAM: Hemolysin-type calcium-binding region; Na-Ca exchanger/integrin-beta4; endonuclease/exonuclease/phosphatase; 5'-nucleotidase domain protein; KEGG: rpb:RPB_0803 5'-nucleotidase YP_002421146.1 PFAM: acyl-CoA thioesterase; KEGG: mex:Mext_2097 acyl-CoA thioesterase II YP_002421147.1 PFAM: nitrogen regulatory protein P-II; KEGG: mex:Mext_2098 nitrogen regulatory protein P-II YP_002421148.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mex:Mext_2099 ammonium transporter YP_002421149.1 KEGG: mex:Mext_2100 hypothetical protein YP_002421150.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: mex:Mext_2101 cell divisionFtsK/SpoIIIE YP_002421151.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2102 TonB-dependent receptor plug YP_002421152.1 KEGG: mex:Mext_2103 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002421153.1 KEGG: mex:Mext_2104 hypothetical protein YP_002421154.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mex:Mext_2105 oxidoreductase alpha (molybdopterin) subunit YP_002421155.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_002421156.1 PFAM: protein of unknown function DUF952; KEGG: mex:Mext_2107 hypothetical protein YP_002421157.1 PFAM: peptidase S24 and S26 domain protein; KEGG: mex:Mext_2108 peptidase S24/S26 domain-containing protein YP_002421158.1 KEGG: mex:Mext_2109 hypothetical protein YP_002421159.1 KEGG: mpo:Mpop_2062 hypothetical protein YP_002421160.1 KEGG: mex:Mext_2111 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein YP_002421161.1 consists of N-terminal helix-turn-helix domain and C-terminal shikimate kinase-like domain which may bind benzoyl-CoA; controls inducible expression of the bzd catabolic operon that is involved in the anaerobic catabolism of benzoate YP_002421162.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: mex:Mext_2113 ATPase domain-containing protein YP_002421163.1 KEGG: mex:Mext_2114 hypothetical protein YP_002421164.1 KEGG: mex:Mext_2115 hypothetical protein YP_002421165.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_2116 response regulator receiver YP_002421166.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_2117 histidine kinase YP_002421167.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_2118 glyoxalase/bleomycin resistance protein/dioxygenase YP_002421168.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_2120 cyclic nucleotide-binding YP_002421169.1 PFAM: PepSY-associated TM helix domain protein; KEGG: mex:Mext_2121 PepSY-associated TM helix domain-containing protein YP_002421170.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2122 TonB-dependent siderophore receptor YP_002421171.1 KEGG: mex:Mext_2123 hypothetical protein YP_002421172.1 PFAM: oxidoreductase molybdopterin binding; KEGG: mex:Mext_2124 oxidoreductase molybdopterin binding YP_002421173.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: mex:Mext_2125 oxidoreductase FAD-binding subunit YP_002421174.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_2126 hypothetical protein YP_002421175.1 KEGG: mpo:Mpop_2084 hypothetical protein YP_002421176.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_002421177.1 KEGG: mex:Mext_2129 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region YP_002421178.1 PFAM: protein of unknown function DUF167; KEGG: mex:Mext_2130 hypothetical protein YP_002421179.1 KEGG: mex:Mext_2131 hypothetical protein YP_002421180.1 PFAM: glycosyl transferase family 28; KEGG: mex:Mext_2132 glycosyl transferase YP_002421181.1 PFAM: creatininase; KEGG: mex:Mext_2133 creatininase YP_002421182.1 KEGG: mex:Mext_2134 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002421183.1 KEGG: mex:Mext_2135 hypothetical protein YP_002421184.1 PFAM: CsbD family protein; KEGG: mex:Mext_2136 CsbD family protein YP_002421185.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_2137 major facilitator transporter YP_002421186.1 PFAM: fumarylacetoacetate hydrolase; KEGG: mex:Mext_2138 fumarylacetoacetate hydrolase YP_002421187.1 KEGG: mex:Mext_2139 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; ketopantoate reductase YP_002421188.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_2140 AMP-dependent synthetase and ligase YP_002421189.1 KEGG: mex:Mext_2141 hypothetical protein YP_002421190.1 KEGG: mex:Mext_2142 hypothetical protein YP_002421191.1 KEGG: mex:Mext_2143 hypothetical protein YP_002421192.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_2144 major facilitator transporter YP_002421193.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_2145 LysR substrate-binding YP_002421194.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: mex:Mext_2146 4-oxalocrotonate tautomerase YP_002421195.1 PFAM: HpcH/HpaI aldolase; KEGG: mex:Mext_2147 citrate (pro-3S)-lyase YP_002421196.1 KEGG: mex:Mext_2148 hypothetical protein YP_002421197.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_2149 HAD family hydrolase YP_002421198.1 KEGG: mex:Mext_2150 hypothetical protein YP_002421199.1 KEGG: mex:Mext_2151 hypothetical protein YP_002421200.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_2152 LysR substrate-binding YP_002421201.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_2153 glyoxalase/bleomycin resistance protein/dioxygenase YP_002421202.1 PFAM: phospholipase/carboxylesterase; KEGG: mex:Mext_2154 phospholipase/carboxylesterase YP_002421203.1 KEGG: mex:Mext_2155 hypothetical protein YP_002421204.1 KEGG: mex:Mext_2156 hypothetical protein YP_002421205.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_002421206.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_002421207.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_002421208.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002421209.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_002421210.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_002421211.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_002421212.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_002421213.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_002421214.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_002421215.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_002421216.1 KEGG: mex:Mext_2168 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; ribosomal protein S3 domain; SMART: KH domain protein YP_002421217.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_002421218.1 PFAM: ribosomal protein L29; KEGG: mpo:Mpop_2131 ribosomal protein L29 YP_002421219.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_002421220.1 PFAM: ATPase AAA; SMART: AAA ATPase; KEGG: mex:Mext_2172 ATPase central domain-containing protein YP_002421221.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_2173 NUDIX hydrolase YP_002421222.1 PFAM: regulatory protein MarR; transcriptional regulator PadR family protein; KEGG: mex:Mext_2174 regulatory protein MarR YP_002421223.1 is a component of the macrolide binding site in the peptidyl transferase center YP_002421224.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_002421225.1 PFAM: beta-lactamase; KEGG: mex:Mext_2177 beta-lactamase domain-containing protein YP_002421226.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_002421227.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_002421228.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_002421229.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: mex:Mext_2181 preprotein translocase, SecY subunit YP_002421230.1 late assembly protein YP_002421231.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_002421232.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_002421233.1 binds 5S rRNA along with protein L5 and L25 YP_002421234.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_002421235.1 PFAM: ribosomal protein S8; KEGG: mex:Mext_2187 ribosomal protein S8 YP_002421236.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif YP_002421237.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_002421238.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_002421239.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_002421240.1 KEGG: mex:Mext_2192 hypothetical protein YP_002421241.1 PFAM: nuclease (SNase domain protein); KEGG: mex:Mext_2193 nuclease YP_002421242.1 KEGG: mex:Mext_2194 hypothetical protein YP_002421243.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_2195 diguanylate cyclase YP_002421244.1 KEGG: mex:Mext_2196 hypothetical protein YP_002421245.1 KEGG: mex:Mext_2197 hypothetical protein YP_002421246.1 KEGG: mex:Mext_2198 hypothetical protein YP_002421247.1 KEGG: mex:Mext_2199 hypothetical protein YP_002421248.1 KEGG: mex:Mext_2200 hypothetical protein YP_002421249.1 KEGG: mex:Mext_2202 hypothetical protein YP_002421250.1 PFAM: monooxygenase FAD-binding; KEGG: mex:Mext_2203 monooxygenase FAD-binding YP_002421251.1 KEGG: mex:Mext_2204 hypothetical protein YP_002421252.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: mex:Mext_2206 methionine aminopeptidase, type I YP_002421253.1 PFAM: DNA repair protein RadC; KEGG: mex:Mext_2207 DNA repair protein RadC YP_002421254.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mex:Mext_2208 hypothetical protein YP_002421255.1 PFAM: protein of unknown function DUF403; KEGG: mex:Mext_2209 hypothetical protein YP_002421256.1 KEGG: mex:Mext_2210 hypothetical protein YP_002421257.1 KEGG: mex:Mext_2211 hypothetical protein YP_002421258.1 KEGG: mpo:Mpop_2169 hypothetical protein YP_002421259.1 KEGG: mex:Mext_2213 hypothetical protein YP_002421260.1 PFAM: transglutaminase; transglutaminase domain protein; KEGG: mex:Mext_2214 transglutaminase domain-containing protein YP_002421261.1 KEGG: mex:Mext_2215 proteasome-type protease YP_002421262.1 PFAM: silent information regulator protein Sir2; KEGG: mex:Mext_2216 silent information regulator protein Sir2 YP_002421263.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: mpo:Mpop_2174 protein of unknown function DUF21 YP_002421264.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_2218 glycosyl transferase YP_002421265.1 KEGG: mex:Mext_2219 hypothetical protein YP_002421266.1 KEGG: mex:Mext_2220 hypothetical protein YP_002421267.1 KEGG: mex:Mext_2221 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_002421268.1 KEGG: mex:Mext_2222 hypothetical protein YP_002421269.1 TIGRFAM: phasin; KEGG: mex:Mext_2223 phasin YP_002421270.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_2224 glycosyl transferase group 1 YP_002421271.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_2225 glycosyl transferase group 1 YP_002421272.1 KEGG: mex:Mext_2226 hypothetical protein YP_002421273.1 KEGG: mex:Mext_2227 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: PAS domain containing protein YP_002421274.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_2228 acyl-CoA dehydrogenase domain-containing protein YP_002421275.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_2229 hypothetical protein YP_002421276.1 PFAM: ribonuclease BN; KEGG: mex:Mext_2230 ribonuclease BN YP_002421277.1 KEGG: mex:Mext_2231 hypothetical protein YP_002421278.1 KEGG: mex:Mext_2232 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_002421279.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_002421280.1 KEGG: mex:Mext_2234 adenylylsulfate reductase, thioredoxin dependent; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase YP_002421281.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: mex:Mext_2235 AsnC/Lrp family regulatory protein YP_002421282.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: mex:Mext_2236 flavodoxin/nitric oxide synthase YP_002421283.1 hemoprotein; NADPH dependent; with the subunit alpha (a flavoprotein) catalyzes the reduction of sulfite to sulfide YP_002421284.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2239 TonB-dependent receptor plug YP_002421285.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_002421286.1 KEGG: mex:Mext_2241 hypothetical protein YP_002421287.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: mex:Mext_2242 helix-turn-helix domain-containing protein YP_002421288.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mex:Mext_2243 single-strand binding protein YP_002421289.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; KEGG: mex:Mext_2244 alcohol dehydrogenase YP_002421290.1 KEGG: mex:Mext_2245 hypothetical protein YP_002421291.1 KEGG: mex:Mext_2246 hypothetical protein YP_002421292.1 KEGG: mex:Mext_2247 hypothetical protein YP_002421293.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mex:Mext_2248 NADH:flavin oxidoreductase/NADH oxidase YP_002421294.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_2249 glutathione S-transferase domain-containing protein YP_002421295.1 KEGG: mex:Mext_2250 hypothetical protein YP_002421296.1 PFAM: thioredoxin domain; KEGG: mex:Mext_2251 thioredoxin domain-containing protein YP_002421297.1 PFAM: peptidase S16; KEGG: mex:Mext_2252 peptidase S16 lon domain-containing protein YP_002421298.1 PFAM: protein of unknown function DUF343; KEGG: mex:Mext_2253 hypothetical protein YP_002421299.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: mex:Mext_2254 import inner membrane translocase subunit Tim44 YP_002421300.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; KEGG: mex:Mext_2255 PAS sensor protein YP_002421301.1 PFAM: cysteine peptidase; KEGG: mex:Mext_2256 cysteine peptidase YP_002421302.1 PFAM: cysteine peptidase; KEGG: mex:Mext_2257 cysteine peptidase YP_002421303.1 PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_2258 type IV pilus assembly PilZ YP_002421304.1 PFAM: protein of unknown function DUF1457; KEGG: mex:Mext_2259 hypothetical protein YP_002421305.1 PFAM: rhomboid family protein; KEGG: mex:Mext_2260 rhomboid family protein YP_002421306.1 KEGG: mex:Mext_2261 hypothetical protein YP_002421307.1 PFAM: CBS domain containing protein; KEGG: mex:Mext_2262 CBS domain-containing protein YP_002421308.1 PFAM: patatin; KEGG: mex:Mext_2263 patatin YP_002421309.1 PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: mex:Mext_2264 phosphoribosyl-AMP cyclohydrolase YP_002421310.1 PFAM: GTP cyclohydrolase I; KEGG: mex:Mext_2265 GTP cyclohydrolase I YP_002421311.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: mex:Mext_2266 NifU domain-containing protein YP_002421312.1 PFAM: protein of unknown function DUF37; KEGG: mex:Mext_2267 hypothetical protein YP_002421313.1 PFAM: protein of unknown function UPF0005; KEGG: mpo:Mpop_2225 protein of unknown function UPF0005 YP_002421314.1 PFAM: protein of unknown function DUF214; KEGG: mex:Mext_2269 hypothetical protein YP_002421315.1 PFAM: ATP-binding region ATPase domain protein; KEGG: mex:Mext_2270 ATPase domain-containing protein YP_002421316.1 involved in the de novo synthesis of pyridoxine (Vitamin B6) YP_002421317.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids YP_002421318.1 KEGG: mex:Mext_2273 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein YP_002421319.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: mex:Mext_2274 ribonuclease III YP_002421320.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: mex:Mext_2275 GTP-binding protein Era YP_002421321.1 PFAM: methyltransferase small; KEGG: mex:Mext_2276 methyltransferase small YP_002421322.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mex:Mext_2277 pseudouridine synthase YP_002421323.1 KEGG: mex:Mext_2278 hypothetical protein YP_002421324.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_2279 Sel1 domain-containing protein YP_002421325.1 KEGG: mex:Mext_2280 hypothetical protein YP_002421326.1 KEGG: mex:Mext_2281 hypothetical protein YP_002421327.1 PFAM: K potassium transporter; KEGG: mex:Mext_2282 K potassium transporter YP_002421328.1 KEGG: mex:Mext_2283 hypothetical protein YP_002421329.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_2284 NUDIX hydrolase YP_002421330.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_2285 chemotaxis sensory transducer YP_002421331.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: mex:Mext_2286 protein of unknown function DUF610 YibQ YP_002421332.1 KEGG: mex:Mext_2287 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41 YP_002421333.1 PFAM: peptidase M23; KEGG: mex:Mext_2288 peptidase M23B YP_002421334.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA YP_002421335.1 PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_2290 general substrate transporter YP_002421336.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_2291 diguanylate cyclase YP_002421337.1 PFAM: DSBA oxidoreductase; KEGG: mex:Mext_2292 DsbA oxidoreductase YP_002421338.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming YP_002421339.1 KEGG: mex:Mext_2295 hypothetical protein YP_002421340.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: mex:Mext_2296 phosphoglycolate phosphatase YP_002421341.1 KEGG: mex:Mext_2297 hypothetical protein YP_002421342.1 KEGG: mex:Mext_2298 ribose 5-phosphate isomerase; TIGRFAM: ribose 5-phosphate isomerase; PFAM: ribose 5-phosphate isomerase YP_002421343.1 KEGG: mex:Mext_2299 hypothetical protein YP_002421344.1 PFAM: O-antigen polymerase; KEGG: mex:Mext_2300 O-antigen polymerase YP_002421345.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: mex:Mext_2301 pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_002421346.1 KEGG: mex:Mext_2302 TRAP-type uncharacterized transport system periplasmic component-like protein YP_002421347.1 KEGG: mex:Mext_2303 hypothetical protein YP_002421348.1 PFAM: OsmC family protein; KEGG: mex:Mext_2304 OsmC family protein YP_002421349.1 KEGG: mex:Mext_2305 radical SAM domain-containing protein YP_002421350.1 PFAM: uracil-DNA glycosylase superfamily; KEGG: mex:Mext_2306 uracil-DNA glycosylase superfamily protein YP_002421351.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_2307 alcohol dehydrogenase YP_002421352.1 KEGG: mex:Mext_2308 hypothetical protein YP_002421353.1 KEGG: mex:Mext_2309 hypothetical protein YP_002421354.1 KEGG: mex:Mext_2310 hypothetical protein YP_002421355.1 PFAM: HpcH/HpaI aldolase; KEGG: mex:Mext_2311 HpcH/HpaI aldolase YP_002421356.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_2312 glutathione S-transferase domain-containing protein YP_002421357.1 KEGG: mex:Mext_2313 hypothetical protein YP_002421358.1 PFAM: catalase; KEGG: mex:Mext_2314 catalase domain-containing protein YP_002421359.1 KEGG: mex:Mext_2315 hypothetical protein YP_002421360.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: mex:Mext_2316 hypothetical protein YP_002421361.1 PFAM: nitroreductase; KEGG: mex:Mext_2317 nitroreductase YP_002421362.1 KEGG: mex:Mext_2318 hypothetical protein YP_002421363.1 KEGG: mex:Mext_2319 hypothetical protein YP_002421364.1 KEGG: mpo:Mpop_2274 hypothetical protein YP_002421365.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: mex:Mext_2320 regulatory protein GntR HTH YP_002421366.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_002421367.1 KEGG: mex:Mext_2322 hypothetical protein YP_002421368.1 PFAM: ROK family protein; KEGG: mex:Mext_2323 ROK family protein YP_002421369.1 PFAM: sodium:dicarboxylate symporter; KEGG: mex:Mext_2324 sodium:dicarboxylate symporter YP_002421370.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme YP_002421371.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_002421372.1 KEGG: mex:Mext_2327 hypothetical protein YP_002421373.1 PFAM: peptidase M16 domain protein; KEGG: mex:Mext_2328 peptidase M16 domain-containing protein YP_002421374.1 PFAM: peptidase M16 domain protein; KEGG: mex:Mext_2329 peptidase M16 domain-containing protein YP_002421375.1 PFAM: YcfA family protein; KEGG: nha:Nham_0566 YcfA-like YP_002421376.1 PFAM: CopG domain protein DNA-binding domain protein; protein of unknown function UPF0150; KEGG: nha:Nham_0567 hypothetical protein YP_002421377.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_2330 glyoxalase/bleomycin resistance protein/dioxygenase YP_002421378.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: mex:Mext_2331 oxidoreductase FAD/NAD(P)-binding subunit YP_002421379.1 TIGRFAM: dethiobiotin synthase; KEGG: mex:Mext_2332 dethiobiotin synthase YP_002421380.1 KEGG: mex:Mext_2333 PRC-barrel YP_002421381.1 PFAM: response regulator receiver; KEGG: mex:Mext_2334 response regulator receiver YP_002421382.1 PFAM: protein of unknown function DUF1275; KEGG: mex:Mext_2335 hypothetical protein YP_002421383.1 SMART: hypothetical protein; KEGG: mex:Mext_2336 WD-40 repeat-containing protein YP_002421384.1 KEGG: mex:Mext_2337 hypothetical protein YP_002421385.1 KEGG: mex:Mext_2338 hypothetical protein YP_002421386.1 KEGG: mex:Mext_2339 hypothetical protein YP_002421387.1 PFAM: protein of unknown function DUF1025; KEGG: mex:Mext_2340 hypothetical protein YP_002421388.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_2341 pyrimidine 5'-nucleotidase YP_002421389.1 TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: mex:Mext_2342 acetylglutamate kinase YP_002421390.1 KEGG: mex:Mext_2343 hypothetical protein YP_002421391.1 PFAM: MOSC domain containing protein; KEGG: mex:Mext_2344 MOSC domain-containing protein YP_002421392.1 PFAM: MOSC domain containing protein; KEGG: mex:Mext_2345 MOSC domain-containing protein YP_002421393.1 KEGG: mex:Mext_2346 ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA; Clp domain protein; ATPase AAA; ATPase AAA; SMART: ATPase AAA YP_002421394.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_2347 metallophosphoesterase YP_002421395.1 PFAM: short chain fatty acid transporter; KEGG: mex:Mext_2348 short chain fatty acid transporter YP_002421396.1 PFAM: protein of unknown function DUF423; KEGG: mex:Mext_2349 hypothetical protein YP_002421397.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential YP_002421398.1 TIGRFAM: YidC translocase/secretase; PFAM: 60 kDa inner membrane insertion protein; KEGG: mex:Mext_2351 60 kDa inner membrane insertion protein YP_002421399.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: mex:Mext_2352 ribonuclease P protein component YP_002421400.1 in Escherichia coli transcription of this gene is enhanced by polyamines YP_002421401.1 PFAM: protein of unknown function DUF1465; KEGG: mex:Mext_2354 hypothetical protein YP_002421402.1 TIGRFAM: ribosomal protein L31; KEGG: mex:Mext_2355 ribosomal protein L31 YP_002421403.1 KEGG: mex:Mext_2356 lipid ABC transporter ATPase/inner membrane protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: ATPase AAA YP_002421404.1 catalyzes the formation of pyruvate from D-cysteine YP_002421405.1 PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_2360 OmpA/MotB domain-containing protein YP_002421406.1 KEGG: mex:Mext_2361 hypothetical protein YP_002421407.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_2362 metallophosphoesterase YP_002421408.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: mex:Mext_2363 5-formyltetrahydrofolate cyclo-ligase YP_002421409.1 PFAM: protein of unknown function DUF710; KEGG: mex:Mext_2364 hypothetical protein YP_002421410.1 KEGG: mex:Mext_2365 hypothetical protein YP_002421411.1 KEGG: mex:Mext_2366 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_002421412.1 KEGG: mex:Mext_2367 hypothetical protein YP_002421413.1 PFAM: phosphoglycerate kinase; KEGG: mex:Mext_2368 phosphoglycerate kinase YP_002421414.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis YP_002421415.1 PFAM: thiamine monophosphate synthase; KEGG: mex:Mext_2370 thiamine monophosphate synthase YP_002421416.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_2371 Sel1 domain-containing protein YP_002421417.1 PFAM: amino acid permease-associated region; KEGG: mex:Mext_2372 amino acid permease-associated region YP_002421418.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: mex:Mext_2373 carbohydrate kinase, YjeF related protein YP_002421419.1 PFAM: nitrogen regulatory protein P-II; KEGG: mrd:Mrad2831_5130 nitrogen regulatory protein P-II YP_002421420.1 catalyzes the formation of glutamate from glutamine YP_002421421.1 PFAM: glutamine synthetase; glutamine synthetase beta-Grasp; KEGG: mex:Mext_2376 glutamate--ammonia ligase YP_002421422.1 TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mex:Mext_2377 glutamine synthetase YP_002421423.1 PFAM: NADPH-dependent FMN reductase; KEGG: mex:Mext_2378 NADPH-dependent FMN reductase YP_002421424.1 KEGG: mex:Mext_2379 hypothetical protein YP_002421425.1 KEGG: mex:Mext_2380 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein YP_002421426.1 PFAM: protein of unknown function DUF983; KEGG: mex:Mext_2381 hypothetical protein YP_002421427.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_2382 NUDIX hydrolase YP_002421428.1 KEGG: mex:Mext_2383 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; type IV pilus assembly PilZ; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002421429.1 KEGG: mex:Mext_2384 hypothetical protein YP_002421430.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; hypothetical protein; KEGG: mex:Mext_2385 hypothetical protein YP_002421431.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_2386 glutathione S-transferase domain-containing protein YP_002421432.1 KEGG: mex:Mext_2387 undecaprenol kinase; TIGRFAM: undecaprenol kinase; PFAM: bacitracin resistance protein BacA YP_002421433.1 PFAM: methylmalonyl-CoA mutase; KEGG: mex:Mext_2388 methylmalonyl-CoA mutase YP_002421434.1 KEGG: mex:Mext_2389 hypothetical protein YP_002421435.1 KEGG: mex:Mext_2390 hypothetical protein YP_002421436.1 KEGG: mex:Mext_2391 hypothetical protein YP_002421437.1 KEGG: mex:Mext_2392 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_002421438.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3691 dTDP-glucose 4,6-dehydratase YP_002421439.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3692 dTDP-4-dehydrorhamnose reductase YP_002421440.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase; KEGG: mex:Mext_2395 glucose-1-phosphate thymidylyltransferase YP_002421441.1 KEGG: mex:Mext_2396 hypothetical protein YP_002421442.1 PFAM: secretion protein HlyD; KEGG: mex:Mext_2397 secretion protein HlyD YP_002421443.1 KEGG: mex:Mext_2412 radical SAM domain-containing protein YP_002421444.1 KEGG: mex:Mext_2413 radical SAM domain-containing protein YP_002421445.1 PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: mex:Mext_2414 multicopper oxidase type 3 YP_002421446.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer YP_002421447.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates YP_002421448.1 binds and unfolds substrates as part of the ClpXP protease YP_002421449.1 KEGG: mex:Mext_2418 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16; ATPase AAA central domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_002421450.1 KEGG: mpo:Mpop_2374 hypothetical protein YP_002421451.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_2461 glycosyl transferase group 1 YP_002421452.1 TIGRFAM: methyltransferase; KEGG: mex:Mext_2462 hypothetical protein YP_002421453.1 PFAM: methyltransferase small; methyltransferase type 12; KEGG: mex:Mext_2463 methyltransferase small YP_002421454.1 PFAM: protein of unknown function YqcI/YcgG; KEGG: mex:Mext_2464 hypothetical protein YP_002421455.1 KEGG: mex:Mext_2465 hypothetical protein YP_002421456.1 TIGRFAM: oligopeptide transporters, OPT superfamily; oligopeptide transporter OPT family; PFAM: oligopeptide transporter OPT superfamily protein; KEGG: mex:Mext_2466 OPT family oligopeptide transporter YP_002421457.1 PFAM: ABC transporter; KEGG: mex:Mext_2467 ABC-2 type transporter YP_002421458.1 KEGG: mex:Mext_2468 hypothetical protein YP_002421459.1 PFAM: ribonuclease BN; KEGG: mex:Mext_2469 ribonuclease BN YP_002421460.1 KEGG: mex:Mext_2470 hypothetical protein YP_002421461.1 KEGG: mex:Mext_2471 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2 YP_002421462.1 PFAM: endonuclease V; KEGG: mex:Mext_2472 deoxyribonuclease V YP_002421463.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_002421464.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_002421465.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_002421466.1 KEGG: mex:Mext_2476 hypothetical protein YP_002421467.1 PFAM: Flp/Fap pilin component; KEGG: mpo:Mpop_2405 Flp/Fap pilin component YP_002421468.1 PFAM: peptidase A24A prepilin type IV; KEGG: mpo:Mpop_2406 peptidase A24A prepilin type IV YP_002421469.1 TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: mex:Mext_2479 Flp pilus assembly protein CpaB YP_002421470.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: mex:Mext_2480 type II and III secretion system protein YP_002421471.1 pilus (Caulobacter type) biogenesis lipoprotein CpaD; TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; PFAM: pilus biogenesis CpaD family protein; KEGG: mex:Mext_2481 pilus biogenesis lipoprotein CpaD YP_002421472.1 KEGG: mex:Mext_2482 pilus assembly protein CpaE YP_002421473.1 PFAM: type II secretion system protein E; KEGG: mex:Mext_2483 type II secretion system protein E YP_002421474.1 PFAM: type II secretion system protein; KEGG: mex:Mext_2484 type II secretion system protein YP_002421475.1 PFAM: type II secretion system protein; KEGG: mex:Mext_2485 type II secretion system protein YP_002421476.1 PFAM: MaoC domain protein dehydratase; KEGG: mex:Mext_2486 dehydratase YP_002421477.1 PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_2487 major facilitator transporter YP_002421478.1 PFAM: OsmC family protein; KEGG: mex:Mext_2488 OsmC family protein YP_002421479.1 PFAM: CoA-binding protein; KEGG: mex:Mext_2489 CoA-binding domain-containing protein YP_002421480.1 PFAM: thioesterase superfamily protein; KEGG: mex:Mext_2490 thioesterase superfamily protein YP_002421481.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_2491 major facilitator transporter YP_002421482.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_2492 diguanylate cyclase YP_002421483.1 PFAM: BA14K family protein; KEGG: mex:Mext_2493 BA14K family protein YP_002421484.1 KEGG: mex:Mext_2494 hypothetical protein YP_002421485.1 PFAM: CsbD family protein; KEGG: mex:Mext_2495 CsbD family protein YP_002421486.1 KEGG: mex:Mext_2496 hypothetical protein YP_002421487.1 PFAM: 3'-5' exonuclease; KEGG: mex:Mext_2497 3'-5' exonuclease YP_002421488.1 PFAM: protein of unknown function DUF1239; KEGG: mex:Mext_2498 hypothetical protein YP_002421489.1 PFAM: OstA family protein; KEGG: mex:Mext_2499 OstA family protein YP_002421490.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_2500 ABC transporter YP_002421491.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: mex:Mext_2501 RNA polymerase sigma-54 factor, RpoN YP_002421492.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: mex:Mext_2502 ribosomal subunit interface protein YP_002421493.1 TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: mex:Mext_2503 PTS IIA-like nitrogen-regulatory protein PtsN YP_002421494.1 KEGG: mex:Mext_2504 hypothetical protein YP_002421495.1 KEGG: mex:Mext_2505 magnesium chelatase ATPase I; TIGRFAM: magnesium chelatase ATPase I; PFAM: magnesium chelatase ChlI subunit; SMART: ATPase AAA YP_002421496.1 catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate YP_002421497.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_002421498.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: mex:Mext_2508 multiple antibiotic resistance (MarC)-related protein YP_002421499.1 PFAM: methyltransferase type 11; KEGG: mpo:Mpop_2437 methyltransferase type 11 YP_002421500.1 KEGG: mex:Mext_2510 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein YP_002421501.1 KEGG: mex:Mext_2511 hypothetical protein YP_002421502.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase; KEGG: mex:Mext_2512 tyrosine recombinase XerD YP_002421503.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_2513 diguanylate cyclase YP_002421504.1 PFAM: glycoside hydrolase; KEGG: mex:Mext_2514 glycoside hydrolase family 3 protein YP_002421505.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_2515 binding-protein-dependent transport systems inner membrane component YP_002421506.1 KEGG: mex:Mext_2516 hypothetical protein YP_002421507.1 PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: mex:Mext_2517 hypothetical protein YP_002421508.1 KEGG: mpo:Mpop_2446 hypothetical protein YP_002421509.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_2519 RND family efflux transporter MFP subunit YP_002421510.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_2520 acriflavin resistance protein YP_002421511.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_2521 acriflavin resistance protein YP_002421512.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mex:Mext_2522 RND efflux system outer membrane lipoprotein YP_002421513.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_002421514.1 KEGG: mpo:Mpop_2452 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_002421515.1 KEGG: mex:Mext_2525 hypothetical protein YP_002421516.1 KEGG: mex:Mext_2526 hypothetical protein YP_002421517.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: mex:Mext_2527 thiamine pyrophosphate binding domain-containing protein YP_002421518.1 PFAM: thiol-disulphide oxidoreductase DCC; KEGG: mex:Mext_2528 thiol-disulphide oxidoreductase DCC YP_002421519.1 PFAM: polyprenyl synthetase; KEGG: mex:Mext_2529 polyprenyl synthetase YP_002421520.1 TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: mex:Mext_2530 monofunctional biosynthetic peptidoglycan transglycosylase YP_002421521.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: mex:Mext_2531 deoxyribodipyrimidine photo-lyase YP_002421522.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: mex:Mext_2532 TRAP dicarboxylate transporter-DctP subunit YP_002421523.1 KEGG: mex:Mext_2533 protein tyrosine phosphatase YP_002421524.1 PFAM: extracellular ligand-binding receptor; KEGG: mex:Mext_2534 extracellular ligand-binding receptor YP_002421525.1 PFAM: polysaccharide export protein; KEGG: mex:Mext_2535 polysaccharide export protein YP_002421526.1 PFAM: sulfatase; KEGG: mex:Mext_2536 sulfatase YP_002421527.1 PFAM: capsule polysaccharide biosynthesis protein; KEGG: mex:Mext_2537 capsule polysaccharide biosynthesis protein YP_002421528.1 PFAM: capsule polysaccharide biosynthesis protein; KEGG: mex:Mext_2538 capsule polysaccharide biosynthesis protein YP_002421529.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_2539 short-chain dehydrogenase/reductase SDR YP_002421530.1 PFAM: formyl transferase; KEGG: mex:Mext_2540 formyl transferase domain-containing protein YP_002421531.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol YP_002421532.1 TIGRFAM: ubiquinol-cytochrome C reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; Ubiquinol-cytochrome C reductase iron-sulfur subunit; KEGG: mex:Mext_2542 ubiquinol-cytochrome C reductase, iron-sulfur subunit YP_002421533.1 PFAM: cytochrome b/b6 domain; KEGG: mex:Mext_2543 cytochrome b/b6 domain-containing protein YP_002421534.1 PFAM: cytochrome C1; KEGG: mex:Mext_2544 cytochrome C1 YP_002421535.1 Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate YP_002421536.1 KEGG: mex:Mext_2546 hypothetical protein YP_002421537.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_2547 metallophosphoesterase YP_002421538.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis YP_002421539.1 KEGG: mex:Mext_2549 hypothetical protein YP_002421540.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_002421541.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: mex:Mext_2551 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_002421542.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_002421543.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: MazG nucleotide pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: mex:Mext_2553 phosphoribosyl-ATP diphosphatase YP_002421544.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis YP_002421545.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_2555 chemotaxis sensory transducer YP_002421546.1 KEGG: mex:Mext_2556 hypothetical protein YP_002421547.1 PFAM: response regulator receiver; KEGG: mex:Mext_2557 response regulator receiver YP_002421548.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2558 ErfK/YbiS/YcfS/YnhG family protein YP_002421549.1 KEGG: mex:Mext_2559 hypothetical protein YP_002421550.1 TIGRFAM: phasin; PFAM: Phasin 2 family protein; KEGG: mex:Mext_2560 phasin YP_002421551.1 KEGG: mex:Mext_2561 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002421552.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_002421553.1 PFAM: protein of unknown function DUF485; KEGG: mex:Mext_2563 hypothetical protein YP_002421554.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: mex:Mext_2564 SSS family solute/sodium (Na+) symporter YP_002421555.1 PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_2565 major facilitator transporter YP_002421556.1 KEGG: mex:Mext_2566 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region YP_002421557.1 PFAM: Heparinase II/III; KEGG: mex:Mext_2567 heparinase II/III family protein YP_002421558.1 PFAM: rhodanese; KEGG: mex:Mext_2568 rhodanese YP_002421559.1 KEGG: mex:Mext_2569 hypothetical protein YP_002421560.1 PFAM: Hemolysin-type calcium-binding region; KEGG: mex:Mext_2570 hemolysin-type calcium-binding region YP_002421561.1 PFAM: helicase; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_2571 DEAD/DEAH box helicase domain-containing protein YP_002421562.1 PFAM: protein of unknown function DUF1508; KEGG: mpo:Mpop_2504 protein of unknown function DUF1508 YP_002421563.1 KEGG: mex:Mext_2573 hypothetical protein YP_002421564.1 KEGG: mpo:Mpop_2506 hypothetical protein YP_002421565.1 PFAM: thioesterase superfamily protein; KEGG: mex:Mext_2575 thioesterase superfamily protein YP_002421566.1 PFAM: beta-lactamase; KEGG: mex:Mext_2576 beta-lactamase domain-containing protein YP_002421567.1 KEGG: mex:Mext_2577 DNA gyrase subunit beta; TIGRFAM: DNA gyrase subunit beta; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; DNA topoisomerase type IIsubunit alpha B region 2 domain protein; SMART: DNA topoisomerase II YP_002421568.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_2578 sigma-70 family RNA polymerase sigma factor YP_002421569.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: mex:Mext_2579 large conductance mechanosensitive channel protein YP_002421570.1 KEGG: mex:Mext_2580 hypothetical protein YP_002421571.1 PFAM: protein of unknown function DUF1236; KEGG: mex:Mext_2581 hypothetical protein YP_002421572.1 PFAM: aminotransferase class I and II; KEGG: mex:Mext_2582 aminotransferase class I and II YP_002421573.1 KEGG: mex:Mext_2583 hypothetical protein YP_002421574.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_2584 ATPase domain-containing protein YP_002421575.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_2585 response regulator receiver YP_002421576.1 PFAM: regulatory protein MarR; KEGG: mex:Mext_2586 regulatory protein MarR YP_002421577.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_002421578.1 KEGG: mex:Mext_2588 hypothetical protein YP_002421579.1 PFAM: Flp/Fap pilin component; KEGG: mpo:Mpop_2617 Flp/Fap pilin component YP_002421580.1 KEGG: mex:Mext_2590 hypothetical protein YP_002421581.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: mex:Mext_2591 multi anti extrusion protein MatE YP_002421582.1 TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mex:Mext_2592 potassium efflux system protein YP_002421583.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_002421584.1 KEGG: mex:Mext_2594 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: aminoglycoside phosphotransferase YP_002421585.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: mex:Mext_2595 redoxin domain-containing protein YP_002421586.1 PFAM: protein of unknown function DUF179; KEGG: mex:Mext_2596 hypothetical protein YP_002421587.1 KEGG: mex:Mext_2597 hypothetical protein YP_002421588.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002421589.1 PFAM: hypothetical protein; KEGG: mex:Mext_2599 helix-turn-helix type 11 domain-containing protein YP_002421590.1 KEGG: mex:Mext_2600 glutathione S-transferase YP_002421591.1 KEGG: mex:Mext_2601 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: ATPase AAA YP_002421592.1 KEGG: mex:Mext_2602 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_002421593.1 TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: mex:Mext_2603 flagellar biosynthetic protein FlhB YP_002421594.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: mex:Mext_2604 flagellar biosynthetic protein FliR YP_002421595.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: mex:Mext_2605 flagellar biosynthetic protein FliQ YP_002421596.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: mex:Mext_2606 flagellar hook-basal body complex subunit FliE YP_002421597.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod YP_002421598.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum YP_002421599.1 KEGG: mex:Mext_2609 hypothetical protein YP_002421600.1 PFAM: FAD dependent oxidoreductase; KEGG: mex:Mext_2610 FAD dependent oxidoreductase YP_002421601.1 PFAM: transglutaminase; KEGG: mex:Mext_2611 transglutaminase domain-containing protein YP_002421602.1 TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome C assembly protein; KEGG: mex:Mext_2612 heme exporter protein CcmC YP_002421603.1 TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD); KEGG: mex:Mext_2613 heme exporter protein CcmD YP_002421604.1 TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; thioredoxin domain; KEGG: mex:Mext_2614 periplasmic protein thiol--disulphide oxidoreductase DsbE YP_002421605.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mex:Mext_2615 hypothetical protein YP_002421606.1 PFAM: protein of unknown function DUF162; KEGG: mex:Mext_2616 hypothetical protein YP_002421607.1 PFAM: protein of unknown function DUF162; KEGG: mex:Mext_2617 hypothetical protein YP_002421608.1 PFAM: transglutaminase; KEGG: mex:Mext_2618 transglutaminase domain-containing protein YP_002421609.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_002421610.1 forms a direct contact with the tRNA during translation YP_002421611.1 KEGG: mex:Mext_2621 hypothetical protein YP_002421612.1 PFAM: TOBE domain protein; KEGG: mex:Mext_2622 TOBE domain-containing protein YP_002421613.1 PFAM: aldose 1-epimerase; KEGG: mex:Mext_2623 aldose 1-epimerase YP_002421614.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_2624 ABC transporter YP_002421615.1 KEGG: mex:Mext_2625 hypothetical protein YP_002421616.1 KEGG: mpo:Mpop_2656 hypothetical protein YP_002421617.1 KEGG: mex:Mext_2626 hypothetical protein YP_002421618.1 PFAM: protein of unknown function DUF329; KEGG: mex:Mext_2627 hypothetical protein YP_002421619.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: mex:Mext_2628 maf protein YP_002421620.1 KEGG: mex:Mext_2629 hypothetical protein YP_002421621.1 KEGG: mex:Mext_2630 hypothetical protein YP_002421622.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2631 TonB-dependent siderophore receptor YP_002421623.1 KEGG: mpo:Mpop_2755 hypothetical protein YP_002421624.1 KEGG: mex:Mext_2632 hypothetical protein YP_002421625.1 KEGG: mex:Mext_2633 hypothetical protein YP_002421626.1 TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: mex:Mext_2634 heme exporter protein CcmB YP_002421627.1 KEGG: mex:Mext_2635 heme exporter protein CcmA; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter; SMART: ATPase AAA YP_002421628.1 KEGG: mex:Mext_2636 hypothetical protein YP_002421629.1 TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: mex:Mext_2637 aconitate hydratase 1 YP_002421631.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: mex:Mext_2638 antibiotic biosynthesis monooxygenase YP_002421632.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: glutathione S-transferase domain; KEGG: mex:Mext_2639 maleylacetoacetate isomerase YP_002421633.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_2640 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002421634.1 PFAM: ethyl tert-butyl ether degradation EthD; KEGG: mex:Mext_2641 ethyl tert-butyl ether degradation EthD YP_002421635.1 KEGG: mex:Mext_2642 hypothetical protein YP_002421636.1 PFAM: chemotaxis sensory transducer; KEGG: mex:Mext_2643 chemotaxis sensory transducer YP_002421637.1 KEGG: mex:Mext_2644 quinolinate synthetase complex, A subunit; TIGRFAM: quinolinate synthetase complex, subunit alpha; PFAM: Quinolinate synthetase A YP_002421638.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: mex:Mext_2645 L-aspartate oxidase YP_002421639.1 KEGG: mex:Mext_2646 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_002421640.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2647 ErfK/YbiS/YcfS/YnhG family protein YP_002421641.1 KEGG: mpo:Mpop_2771 hypothetical protein YP_002421642.1 KEGG: mex:Mext_2648 hypothetical protein YP_002421643.1 PFAM: protein of unknown function DUF971; KEGG: mex:Mext_2649 hypothetical protein YP_002421644.1 KEGG: mex:Mext_2650 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: radical SAM domain protein; molybdenum cofactor synthesis protein; SMART: Elongator protein 3/MiaB/NifB YP_002421645.1 KEGG: mex:Mext_2651 hypothetical protein YP_002421646.1 PFAM: GSCFA domain protein; KEGG: mex:Mext_2652 GSCFA domain-containing protein YP_002421647.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mex:Mext_2653 6-phosphogluconate dehydrogenase NAD-binding YP_002421648.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_002421649.1 KEGG: mex:Mext_2655 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_002421650.1 KEGG: mex:Mext_2656 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_002421651.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: mex:Mext_2657 HflC protein YP_002421652.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: mex:Mext_2658 HflK protein YP_002421653.1 PFAM: dihydrofolate reductase region; KEGG: mex:Mext_2659 dihydrofolate reductase YP_002421654.1 PFAM: thymidylate synthase; KEGG: mex:Mext_2660 thymidylate synthase YP_002421655.1 PFAM: hypothetical protein; KEGG: mex:Mext_2661 abortive infection protein YP_002421656.1 PFAM: protein of unknown function DUF1321; KEGG: mex:Mext_2662 hypothetical protein YP_002421657.1 PFAM: cytochrome P450; KEGG: mex:Mext_2663 cytochrome P450 YP_002421658.1 TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; fumarate hydratase class II; KEGG: mex:Mext_2664 fumarate hydratase, class II YP_002421659.1 KEGG: mex:Mext_2665 hypothetical protein YP_002421660.1 KEGG: mpo:Mpop_2788 hypothetical protein YP_002421661.1 PFAM: protein of unknown function DUF1052; KEGG: mex:Mext_2667 hypothetical protein YP_002421662.1 PFAM: periplasmic binding protein; KEGG: mex:Mext_2668 periplasmic binding protein YP_002421663.1 KEGG: mex:Mext_2669 hypothetical protein YP_002421664.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal YP_002421665.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: mex:Mext_2671 PhzF family phenazine biosynthesis protein YP_002421666.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_2672 NUDIX hydrolase YP_002421667.1 KEGG: mex:Mext_2673 hypothetical protein YP_002421668.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis YP_002421669.1 KEGG: mex:Mext_2675 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_002421670.1 PFAM: protein of unknown function DUF1611; KEGG: mex:Mext_2676 hypothetical protein YP_002421671.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: mex:Mext_2677 mandelate racemase/muconate lactonizing protein YP_002421672.1 PFAM: lytic transglycosylase catalytic; KEGG: mex:Mext_2678 lytic transglycosylase catalytic YP_002421673.1 PFAM: myo-inositol-1-phosphate synthase; myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: mex:Mext_2679 inositol-3-phosphate synthase YP_002421674.1 KEGG: mex:Mext_2680 hypothetical protein YP_002421675.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_2681 methyltransferase type 11 YP_002421676.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: mex:Mext_2682 oxidoreductase domain-containing protein YP_002421677.1 PFAM: protein of unknown function DUF181; KEGG: mex:Mext_2683 hypothetical protein YP_002421678.1 PFAM: xylose isomerase; KEGG: mex:Mext_2684 xylose isomerase domain-containing protein YP_002421679.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_2685 glycosyl transferase group 1 YP_002421680.1 PFAM: LmbE family protein; KEGG: mex:Mext_2686 LmbE family protein YP_002421681.1 PFAM: uracil-DNA glycosylase superfamily; KEGG: mex:Mext_2687 uracil-DNA glycosylase superfamily protein YP_002421682.1 KEGG: mex:Mext_2688 hypothetical protein YP_002421683.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; KEGG: mex:Mext_2689 histidine kinase YP_002421684.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mex:Mext_2690 ATPase P YP_002421685.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; KEGG: mex:Mext_2691 Cu(I)-responsive transcriptional regulator YP_002421686.1 KEGG: mex:Mext_2692 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_002421687.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mpo:Mpop_2816 methyl-accepting chemotaxis sensory transducer YP_002421688.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: mex:Mext_2695 tRNA pseudouridine synthase B YP_002421689.1 PFAM: ribosome-binding factor A; KEGG: mex:Mext_2696 ribosome-binding factor A YP_002421690.1 TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; GTP-binding protein HSR1-related; elongation factor Tu domain 2 protein; translation initiation factor IF-2 domain protein; Initiation factor 2 associated domain protein ; Miro domain protein; KEGG: mex:Mext_2697 translation initiation factor IF-2 YP_002421691.1 PFAM: protein of unknown function DUF448; KEGG: mex:Mext_2698 hypothetical protein YP_002421692.1 KEGG: mex:Mext_2699 transcription termination factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH type 1 domain protein; NusA domain protein; SMART: KH domain protein YP_002421693.1 PFAM: protein of unknown function DUF150; KEGG: mex:Mext_2700 hypothetical protein YP_002421694.1 KEGG: mex:Mext_2701 streptogramin A acetyltransferase YP_002421696.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: semialdehyde dehydrogenase NAD - binding; semialdehyde dehydrogenase dimerisation region; KEGG: mex:Mext_2702 aspartate-semialdehyde dehydrogenase YP_002421697.1 KEGG: mex:Mext_2703 hypothetical protein YP_002421698.1 KEGG: mex:Mext_2704 hypothetical protein YP_002421699.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2705 GCN5-related N-acetyltransferase YP_002421700.1 KEGG: mex:Mext_2706 hypothetical protein YP_002421701.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_2707 cobalamin synthesis protein P47K YP_002421702.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_2708 regulatory protein TetR YP_002421703.1 KEGG: mex:Mext_2709 hypothetical protein YP_002421704.1 KEGG: mex:Mext_2710 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_002421705.1 amylomaltase; acts to release glucose from maltodextrins YP_002421706.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mex:Mext_2712 alpha amylase catalytic region YP_002421707.1 KEGG: mex:Mext_2713 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused maltokinase; PFAM: aminoglycoside phosphotransferase; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_002421708.1 KEGG: mex:Mext_2714 1,4-alpha-glucan branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain YP_002421709.1 PFAM: protein of unknown function UPF0060; KEGG: mex:Mext_2715 hypothetical protein YP_002421710.1 KEGG: mpo:Mpop_2838 hypothetical protein YP_002421711.1 KEGG: mex:Mext_2717 radical SAM domain-containing protein YP_002421712.1 PFAM: endonuclease III FCL domain protein; SMART: HhH-GPD family protein; KEGG: mex:Mext_2718 HhH-GPD family protein YP_002421713.1 PFAM: transcription activator effector binding; KEGG: mex:Mext_2719 transcription activator effector binding YP_002421714.1 PFAM: diaminopimelate epimerase; KEGG: mex:Mext_2720 diaminopimelate epimerase YP_002421715.1 KEGG: mex:Mext_2721 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: radical SAM protein; protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB YP_002421716.1 PFAM: pseudouridine synthase; KEGG: mex:Mext_2722 pseudouridine synthase YP_002421717.1 KEGG: mex:Mext_2723 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA YP_002421718.1 TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; KEGG: mex:Mext_2724 intracellular septation protein A YP_002421719.1 PFAM: hydroxyneurosporene synthase; KEGG: mex:Mext_2725 hydroxyneurosporene synthase YP_002421720.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_2726 phytoene desaturase YP_002421721.1 PFAM: polyprenyl synthetase; KEGG: mex:Mext_2727 polyprenyl synthetase YP_002421722.1 PFAM: O-methyltransferase family 2; methyltransferase type 12; KEGG: mex:Mext_2728 O-methyltransferase family protein YP_002421723.1 TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_2729 chlorophyll synthesis pathway, BchC YP_002421724.1 KEGG: mex:Mext_2730 chlorophyllide reductase iron protein subunit X; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein YP_002421725.1 TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase component 1; KEGG: mex:Mext_2731 chlorophyllide reductase subunit Y YP_002421726.1 TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1; protein of unknown function DUF1197; KEGG: mex:Mext_2732 chlorophyllide reductase subunit Z YP_002421727.1 KEGG: mex:Mext_2733 hypothetical protein YP_002421728.1 PFAM: antenna complex alpha/subunit beta; KEGG: mex:Mext_2734 antenna complex alpha/subunit beta YP_002421729.1 PFAM: antenna complex alpha/subunit beta; KEGG: mex:Mext_2735 antenna complex alpha/subunit beta YP_002421730.1 TIGRFAM: photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; KEGG: mex:Mext_2736 photosynthetic reaction center subunit L YP_002421731.1 TIGRFAM: photosynthetic reaction center, M subunit; PFAM: photosynthetic reaction centre protein; KEGG: mpo:Mpop_2859 photosynthetic reaction center, M subunit YP_002421732.1 KEGG: mex:Mext_2739 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_002421733.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD; KEGG: mex:Mext_2740 HlyD family type I secretion membrane fusion protein YP_002421734.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif YP_002421735.1 PFAM: hypotheticalprotein; Tetratricopeptide TPR_2 repeat protein; SMART: hypothetical protein; KEGG: mex:Mext_2742 hypotheticalprotein YP_002421736.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_2743 alpha/beta hydrolase fold YP_002421737.1 KEGG: mex:Mext_2744 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta YP_002421738.1 KEGG: mex:Mext_2745 porin YP_002421739.1 PFAM: protein of unknown function DUF1036; KEGG: mex:Mext_2746 hypothetical protein YP_002421740.1 PFAM: MOFRL domain protein; KEGG: mex:Mext_2747 hydroxypyruvate reductase YP_002421741.1 PFAM: N-formylglutamate amidohydrolase; KEGG: mex:Mext_2748 N-formylglutamate amidohydrolase YP_002421742.1 PFAM: protein of unknown function DUF1244; KEGG: mex:Mext_2749 hypothetical protein YP_002421743.1 KEGG: mpo:Mpop_2872 hypothetical protein YP_002421744.1 PFAM: protein of unknown function DUF882; peptidase M15A; KEGG: mex:Mext_2751 hypothetical protein YP_002421745.1 PFAM: peptidoglycan-binding protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2752 peptidoglycan binding domain-containing protein YP_002421746.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: mex:Mext_2753 sigma-54 factor interaction domain-containing protein YP_002421747.1 TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase F; KEGG: mex:Mext_2754 PepF/M3 family oligoendopeptidase YP_002421748.1 TIGRFAM: addiction module antidote; PFAM: SpoVT/AbrB domain protein; KEGG: bra:BRADO1193 AbrB family transcriptional regulator YP_002421749.1 TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; KEGG: mpo:Mpop_2879 death-on-curing family protein YP_002421750.1 PFAM: ABC transporter; KEGG: mex:Mext_2757 hypothetical protein YP_002421751.1 KEGG: mex:Mext_2758 hypothetical protein YP_002421752.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: mex:Mext_2759 NAD(P)(+) transhydrogenase (AB-specific) YP_002421753.1 KEGG: mex:Mext_2760 PntAB, NAD(P) transhydrogenase, alpha2 subunit YP_002421754.1 PFAM: NAD(P) transhydrogenase subunit beta; KEGG: mex:Mext_2761 NAD(P)(+) transhydrogenase (AB-specific) YP_002421755.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: mex:Mext_2762 single-stranded-DNA-specific exonuclease RecJ YP_002421756.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_2763 cyclic nucleotide-binding YP_002421757.1 PFAM: HWE histidine kinase; KEGG: mex:Mext_2764 HWE histidine kinase YP_002421758.1 PFAM: surface antigen (D15); KEGG: mex:Mext_2765 surface antigen (D15) YP_002421759.1 PFAM: protein of unknown function DUF490; KEGG: mex:Mext_2766 hypothetical protein YP_002421760.1 KEGG: mpo:Mpop_2890 hypothetical protein YP_002421761.1 KEGG: mex:Mext_2768 hypothetical protein YP_002421762.1 catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide YP_002421763.1 KEGG: mex:Mext_2770 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; ATPase AAA; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; ATPase AAA YP_002421764.1 PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_2771 carbohydrate-selective porin OprB YP_002421765.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: mex:Mext_2772 cytochrome-c peroxidase YP_002421766.1 KEGG: mex:Mext_2773 hypothetical protein YP_002421767.1 KEGG: mex:Mext_2774 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002421768.1 PFAM: manganese containing catalase; KEGG: mex:Mext_2775 catalase YP_002421769.1 PFAM: protein of unknown function DUF892; KEGG: mex:Mext_2776 hypothetical protein YP_002421770.1 KEGG: mex:Mext_2777 hypothetical protein YP_002421771.1 KEGG: mex:Mext_2778 hypothetical protein YP_002421772.1 PFAM: CBS domain containing protein; chloride channel core; KEGG: mex:Mext_2779 chloride channel core YP_002421773.1 KEGG: mex:Mext_2780 hypothetical protein YP_002421774.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis YP_002421775.1 KEGG: mex:Mext_2782 transmembrane protein YP_002421777.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis YP_002421778.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_002421779.1 PFAM: septum formation initiator; KEGG: mex:Mext_2785 septum formation initiator YP_002421780.1 KEGG: mex:Mext_2786 pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; PFAM: dehydrogenase E1 component YP_002421781.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase YP_002421782.1 KEGG: mex:Mext_2788 hypothetical protein YP_002421783.1 KEGG: mex:Mext_2789 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein YP_002421784.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_002421785.1 KEGG: mex:Mext_2791 hypothetical protein YP_002421786.1 KEGG: mex:Mext_2792 hypothetical protein YP_002421787.1 KEGG: mex:Mext_2793 endo-1,4-beta-glucanase YP_002421788.1 KEGG: mex:Mext_2794 hypothetical protein YP_002421789.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2795 ErfK/YbiS/YcfS/YnhG family protein YP_002421790.1 KEGG: mex:Mext_2796 L-sorbosone dehydrogenase YP_002421791.1 KEGG: mex:Mext_2797 hypothetical protein YP_002421792.1 PFAM: cell wall hydrolase SleB; KEGG: mex:Mext_2798 cell wall hydrolase SleB YP_002421793.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_002421794.1 PFAM: cyclase/dehydrase; KEGG: mex:Mext_2800 cyclase/dehydrase YP_002421795.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: mex:Mext_2801 AsnC/Lrp family regulatory protein YP_002421796.1 catalyzes the formation of L-proline from L-ornithine YP_002421797.1 PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: mex:Mext_2803 beta-ketoacyl-acyl-carrier-protein synthase I YP_002421798.1 KEGG: mex:Mext_2804 hypothetical protein YP_002421799.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: mex:Mext_2805 beta-ketoacyl-acyl-carrier-protein synthase I YP_002421800.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_2806 short-chain dehydrogenase/reductase SDR YP_002421801.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mex:Mext_2807 Rieske (2Fe-2S) domain-containing protein YP_002421802.1 KEGG: mex:Mext_2808 hexapeptide transferase family protein YP_002421803.1 PFAM: hypotheticalprotein; Tetratricopeptide TPR_4; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_2809 hypotheticalprotein YP_002421804.1 KEGG: mex:Mext_2810 hypothetical protein YP_002421805.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_2811 ABC transporter YP_002421806.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_2813 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_002421807.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: mex:Mext_2814 molybdopterin dehydrogenase FAD-binding YP_002421808.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_2815 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_002421809.1 PFAM: damage inducible protein CinA; KEGG: mex:Mext_2816 CinA domain-containing protein YP_002421810.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MECDP-synthase; KEGG: mex:Mext_2817 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_002421811.1 TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase; KEGG: mex:Mext_2818 NifR3 family TIM-barrel protein YP_002421812.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: mex:Mext_2819 PAS sensor protein YP_002421813.1 KEGG: mex:Mext_2820 nitrogen regulation protein NR(I); TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_002421814.1 PFAM: helicase; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: mex:Mext_2821 helicase domain-containing protein YP_002421815.1 KEGG: mex:Mext_2822 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002421816.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: mex:Mext_2823 sigma-54 factor interaction domain-containing protein YP_002421817.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: mpo:Mpop_2942 RNA chaperone Hfq YP_002421818.1 TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: mex:Mext_2825 GTP-binding protein HflX YP_002421819.1 PFAM: xanthine/uracil/vitamin C permease; sulfate transporter; KEGG: mex:Mext_2826 sulfate transporter YP_002421820.1 PFAM: carbonic anhydrase; KEGG: mex:Mext_2827 carbonate dehydratase YP_002421821.1 KEGG: mex:Mext_2828 hypothetical protein YP_002421822.1 PFAM: protein of unknown function DUF305; KEGG: mex:Mext_2829 hypothetical protein YP_002421823.1 KEGG: mex:Mext_2830 hypothetical protein YP_002421824.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_2831 acriflavin resistance protein YP_002421825.1 TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: mex:Mext_2832 RND family efflux transporter MFP subunit YP_002421826.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_2834 ROSMUCR transcriptional regulator YP_002421827.1 PFAM: CheW domain protein; KEGG: mex:Mext_2835 CheW domain-containing protein YP_002421828.1 PFAM: MCP methyltransferase CheR-type; KEGG: mex:Mext_2836 protein-glutamate O-methyltransferase YP_002421829.1 PFAM: CheW domain protein; KEGG: mex:Mext_2837 CheW domain-containing protein YP_002421830.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_2838 chemotaxis sensory transducer YP_002421831.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: mex:Mext_2839 response regulator receiver YP_002421832.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: mex:Mext_2840 protein-glutamate methylesterase YP_002421833.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_2841 ATPase domain-containing protein YP_002421834.1 KEGG: mex:Mext_2842 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_002421835.1 PFAM: metallothionein family 14; KEGG: mex:Mext_2843 metallothionein family protein YP_002421836.1 PFAM: hypothetical protein; cytochrome C class I; KEGG: mex:Mext_2844 WD-40 repeat-containing protein YP_002421837.1 PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_2845 molybdopterin binding domain-containing protein YP_002421838.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_2846 molybdenum cofactor synthesis domain-containing protein YP_002421839.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: mex:Mext_2847 molybdopterin-guanine dinucleotide biosynthesis protein B YP_002421840.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_2848 molybdenum cofactor synthesis domain-containing protein YP_002421841.1 PFAM: regulatory protein LysR; KEGG: mex:Mext_2849 regulatory protein LysR YP_002421842.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_2850 binding-protein-dependent transport systems inner membrane component YP_002421843.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_2851 ABC transporter YP_002421844.1 PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_2852 extracellular solute-binding protein YP_002421845.1 KEGG: mex:Mext_2853 hypothetical protein YP_002421846.1 PFAM: PRC-barrel domain protein; KEGG: mex:Mext_2854 PRC-barrel domain-containing protein YP_002421847.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan YP_002421848.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space YP_002421849.1 KEGG: mex:Mext_2857 hypothetical protein YP_002421850.1 PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mex:Mext_2858 cystathionine gamma-synthase YP_002421851.1 PFAM: TspO/MBR family protein; KEGG: mex:Mext_2859 TspO/MBR family protein YP_002421852.1 PFAM: response regulator receiver; KEGG: mex:Mext_2860 response regulator receiver YP_002421853.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: mex:Mext_2861 hypoxanthine phosphoribosyltransferase YP_002421854.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: mex:Mext_2862 zinc finger-domain-containing protein YP_002421855.1 KEGG: mex:Mext_2863 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: ATPase AAA YP_002421856.1 KEGG: mex:Mext_2864 hypothetical protein YP_002421857.1 PFAM: protein of unknown function DUF218; KEGG: mex:Mext_2865 hypothetical protein YP_002421858.1 PFAM: response regulator receiver; KEGG: mex:Mext_2866 response regulator receiver YP_002421859.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis YP_002421860.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_002421861.1 TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; KEGG: mex:Mext_2869 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_002421862.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: mex:Mext_2870 iojap-like protein YP_002421863.1 KEGG: mex:Mext_2871 hypothetical protein YP_002421864.1 KEGG: mex:Mext_2872 transcriptional regulator YP_002421865.1 PFAM: aldose 1-epimerase; KEGG: mex:Mext_2873 aldose 1-epimerase YP_002421866.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: ATPase AAA; KEGG: mex:Mext_2874 ABC transporter related YP_002421867.1 PFAM: periplasmic solute binding protein; KEGG: mex:Mext_2875 periplasmic solute binding protein YP_002421868.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: mpo:Mpop_2999 molybdopterin converting factor, subunit 1 YP_002421869.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mex:Mext_2877 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_002421870.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: mex:Mext_2878 excinuclease ABC, C subunit YP_002421871.1 KEGG: mex:Mext_2879 hypothetical protein YP_002421872.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2880 ErfK/YbiS/YcfS/YnhG family protein YP_002421873.1 KEGG: mex:Mext_2881 periplasmic ligand-binding sensor protein YP_002421874.1 KEGG: mex:Mext_2882 porin YP_002421875.1 PFAM: protein of unknown function DUF152; KEGG: mex:Mext_2883 hypothetical protein YP_002421876.1 PFAM: protein of unknown function DUF185; KEGG: mex:Mext_2884 hypothetical protein YP_002421877.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mex:Mext_2885 prolipoprotein diacylglyceryl transferase YP_002421878.1 PFAM: MgtC/SapB transporter; KEGG: mex:Mext_2886 MgtC/SapB transporter YP_002421879.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate YP_002421880.1 KEGG: mex:Mext_2888 hypothetical protein YP_002421881.1 PFAM: cell wall hydrolase SleB; KEGG: mex:Mext_2889 cell wall hydrolase SleB YP_002421882.1 KEGG: mex:Mext_2890 hypothetical protein YP_002421883.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_002421884.1 KEGG: mex:Mext_2892 hypothetical protein YP_002421885.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2893 ErfK/YbiS/YcfS/YnhG family protein YP_002421886.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_2894 glyoxalase/bleomycin resistance protein/dioxygenase YP_002421887.1 KEGG: mex:Mext_2895 hypothetical protein YP_002421888.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_2896 cyclic nucleotide-binding YP_002421889.1 KEGG: mpo:Mpop_3020 hypothetical protein YP_002421890.1 KEGG: mex:Mext_2898 hypothetical protein YP_002421891.1 PFAM: regulatory protein MarR; transcriptional regulator TrmB; KEGG: mex:Mext_2899 regulatory protein MarR YP_002421892.1 KEGG: mex:Mext_2900 hypothetical protein YP_002421893.1 PFAM: beta-lactamase; KEGG: mex:Mext_2901 beta-lactamase domain-containing protein YP_002421894.1 KEGG: mex:Mext_2902 hypothetical protein YP_002421895.1 PFAM: protein of unknown function DUF1328; KEGG: mex:Mext_2903 hypothetical protein YP_002421896.1 KEGG: mpo:Mpop_3028 hypothetical protein YP_002421897.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media YP_002421898.1 KEGG: mex:Mext_2906 hypothetical protein YP_002421899.1 PFAM: protein of unknown function UPF0153; KEGG: mex:Mext_2907 hypothetical protein YP_002421900.1 PFAM: aminotransferase class-III; KEGG: mex:Mext_2908 aminotransferase class-III YP_002421901.1 KEGG: mex:Mext_2909 hypothetical protein YP_002421902.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_2910 metallophosphoesterase YP_002421903.1 KEGG: mex:Mext_2911 hypothetical protein YP_002421904.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2912 GCN5-related N-acetyltransferase YP_002421905.1 PFAM: HhH-GPD family protein; AlkA domain protein; KEGG: mex:Mext_2913 alcohol dehydrogenase YP_002421906.1 KEGG: mex:Mext_2914 hypothetical protein YP_002421907.1 TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: mex:Mext_2915 ribonuclease D YP_002421908.1 KEGG: mex:Mext_2916 hypothetical protein YP_002421909.1 PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: mex:Mext_2917 serine-type D-Ala-D-Ala carboxypeptidase YP_002421910.1 PFAM: AsmA family protein; KEGG: mex:Mext_2918 AsmA family protein YP_002421911.1 KEGG: mex:Mext_2919 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase subunit alpha; PFAM: coenzyme A transferase YP_002421912.1 KEGG: mex:Mext_2920 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase subunit beta; PFAM: coenzyme A transferase YP_002421913.1 KEGG: mex:Mext_2921 hypothetical protein YP_002421914.1 PFAM: PepSY-associated TM helix domain protein; KEGG: mex:Mext_2923 PepSY-associated TM helix domain-containing protein YP_002421915.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2924 TonB-dependent receptor YP_002421916.1 KEGG: mex:Mext_2925 hypothetical protein YP_002421917.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_2926 ABC transporter YP_002421918.1 PFAM: transporter permease; KEGG: mex:Mext_2927 transporter permease YP_002421919.1 PFAM: periplasmic binding protein; KEGG: mex:Mext_2928 periplasmic binding protein YP_002421920.1 TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: xfn:XfasM23_1253 addiction module killer protein YP_002421921.1 TIGRFAM: addiction module antidote protein; KEGG: mpo:Mpop_4949 transcriptional regulator YP_002421922.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_002421923.1 KEGG: mpo:Mpop_3114 hypothetical protein YP_002421924.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: mex:Mext_2932 phosphoesterase PA-phosphatase related YP_002421925.1 KEGG: mex:Mext_2933 hypothetical protein YP_002421926.1 PFAM: Fmu (Sun) domain protein; KEGG: mex:Mext_2934 Fmu (Sun) domain-containing protein YP_002421927.1 KEGG: mex:Mext_2935 hypothetical protein YP_002421928.1 KEGG: mex:Mext_2936 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_002421929.1 KEGG: mex:Mext_2937 hypothetical protein YP_002421930.1 KEGG: mex:Mext_2938 hypothetical protein YP_002421931.1 KEGG: mpo:Mpop_3121 hypothetical protein YP_002421932.1 KEGG: mex:Mext_2939 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase YP_002421933.1 PFAM: cell cycle protein; KEGG: mex:Mext_2940 cell cycle protein YP_002421934.1 KEGG: mex:Mext_2941 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; glycosyltransferase 28 domain YP_002421935.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_002421936.1 KEGG: mex:Mext_2943 phage-related transcriptional regulator YP_002421937.1 KEGG: mex:Mext_2944 hypothetical protein YP_002421938.1 KEGG: mex:Mext_2945 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein YP_002421939.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_002421940.1 PFAM: cell division protein FtsQ; polypeptide-transport-associated domain protein FtsQ-type; KEGG: mex:Mext_2947 polypeptide-transport-associated domain-containing protein YP_002421941.1 PFAM: cell division protein FtsA; KEGG: mpo:Mpop_3132 cell division protein FtsA YP_002421942.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: mex:Mext_2949 cell division protein FtsZ YP_002421943.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis YP_002421944.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: mex:Mext_2951 lipoprotein YP_002421945.1 KEGG: mex:Mext_2953 hypothetical protein YP_002421946.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: mex:Mext_2954 DNA repair protein RecN YP_002421947.1 KEGG: mpo:Mpop_3139 hypothetical protein YP_002421948.1 PFAM: YiaAB two helix domain protein; KEGG: mex:Mext_2956 YiaAB two helix domain-containing protein YP_002421949.1 PFAM: PspA/IM30 family protein; KEGG: mex:Mext_2957 PspA/IM30 family protein YP_002421950.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mex:Mext_2958 oxidoreductase alpha (molybdopterin) subunit YP_002421951.1 KEGG: mex:Mext_2959 hypothetical protein YP_002421952.1 KEGG: mex:Mext_2960 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: heat shock protein 70 YP_002421953.1 TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: mex:Mext_2961 chaperone protein DnaJ YP_002421954.1 KEGG: mex:Mext_2962 phospholipid N-methyltransferase YP_002421955.1 KEGG: mex:Mext_2963 hypothetical protein YP_002421956.1 KEGG: mex:Mext_2964 thymidine phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; thymidine phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; glycosyl transferase, family 3-like YP_002421957.1 KEGG: mex:Mext_2965 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_002421958.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation YP_002421959.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mex:Mext_2967 cytidine deaminase YP_002421960.1 KEGG: mex:Mext_2968 hypothetical protein YP_002421961.1 KEGG: mex:Mext_2969 tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_002421962.1 PFAM: 3-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: mex:Mext_2970 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein YP_002421963.1 PFAM: protein of unknown function DUF374; KEGG: mex:Mext_2971 hypothetical protein YP_002421964.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_2972 metallophosphoesterase YP_002421965.1 PFAM: response regulator receiver; KEGG: mex:Mext_2973 response regulator receiver YP_002421966.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_2974 cold-shock protein DNA-binding YP_002421967.1 KEGG: mex:Mext_2975 hypothetical protein YP_002421968.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: mex:Mext_2976 leucyl aminopeptidase YP_002421969.1 PFAM: hypotheticalprotein; Tetratricopeptide TPR_4; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_2977 hypotheticalprotein YP_002421970.1 required for 70S ribosome assembly YP_002421971.1 PFAM: hypothetical protein; KEGG: mex:Mext_2979 auxin efflux carrier YP_002421972.1 class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine YP_002421973.1 KEGG: mex:Mext_2981 hypothetical protein YP_002421974.1 TIGRFAM: peptide chain release factor 2; PFAM: class I peptide chain release factor; PCRF domain protein; KEGG: mex:Mext_2982 peptide chain release factor 2 YP_002421975.1 PFAM: peptidase M23; KEGG: mex:Mext_2983 peptidase M23B YP_002421976.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: mex:Mext_2984 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_002421977.1 KEGG: mex:Mext_2985 hypothetical protein YP_002421978.1 PFAM: fatty acid desaturase; KEGG: mex:Mext_2986 fatty acid desaturase YP_002421979.1 KEGG: mex:Mext_2987 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_002421980.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling YP_002421981.1 KEGG: mex:Mext_2989 hypothetical protein YP_002421982.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_002421983.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: mex:Mext_2991 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_002421984.1 PFAM: histone deacetylase superfamily; KEGG: mex:Mext_2993 histone deacetylase superfamily protein YP_002421985.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2994 ErfK/YbiS/YcfS/YnhG family protein YP_002421986.1 KEGG: mex:Mext_2995 hypothetical protein YP_002421987.1 PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: mex:Mext_2996 carbamoyl-phosphate synthase L chain ATP-binding YP_002421988.1 PFAM: AIG2 family protein; KEGG: mex:Mext_2997 AIG2 family protein YP_002421989.1 PFAM: acylphosphatase; KEGG: mex:Mext_2998 acylphosphatase YP_002421990.1 PFAM: protein of unknown function DUF599; KEGG: mex:Mext_2999 hypothetical protein YP_002421991.1 KEGG: mex:Mext_3000 hypothetical protein YP_002421992.1 PFAM: protein of unknown function DUF218; KEGG: mex:Mext_3001 hypothetical protein YP_002421993.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_3002 glutathione S-transferase domain-containing protein YP_002421994.1 KEGG: mex:Mext_3003 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: radical SAM domain protein YP_002421995.1 PFAM: tRNA synthetase class II (D K and N); KEGG: mex:Mext_3004 tRNA synthetase class II (D K and N) YP_002421996.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_002421997.1 PFAM: protein of unknown function DUF1624; KEGG: mex:Mext_3006 hypothetical protein YP_002421998.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_3007 cold-shock protein DNA-binding YP_002421999.1 PFAM: protein of unknown function DUF192; KEGG: mex:Mext_3008 hypothetical protein YP_002422000.1 TIGRFAM: magnesium chelatase accessory protein; PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3010 magnesium chelatase accessory protein YP_002422001.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_3011 phytoene desaturase YP_002422002.1 PFAM: Squalene/phytoene synthase; KEGG: mex:Mext_3012 squalene/phytoene synthase YP_002422003.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: mex:Mext_3013 urease accessory protein UreG YP_002422004.1 PFAM: urease accessory protein UreF; KEGG: mex:Mext_3014 urease accessory protein UreF YP_002422005.1 PFAM: urease accessory protein UreE; KEGG: mex:Mext_3015 UreE urease accessory domain-containing protein YP_002422006.1 PFAM: protein of unknown function DUF29; KEGG: npu:Npun_R4412 hypothetical protein YP_002422007.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_002422008.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mex:Mext_3018 metal-dependent phosphohydrolase YP_002422009.1 KEGG: mex:Mext_3019 urease subunit gamma; TIGRFAM: urease subunit beta; urease subunit gamma; PFAM: urease subunit beta; urease subunit gamma region YP_002422010.1 PFAM: urease accessory protein UreD; KEGG: mex:Mext_3020 urease accessory protein UreD YP_002422011.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: mex:Mext_3021 flavin reductase domain-containing protein YP_002422012.1 KEGG: mex:Mext_3022 hypothetical protein YP_002422013.1 catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway. YP_002422014.1 KEGG: mex:Mext_3025 hypothetical protein YP_002422015.1 KEGG: mex:Mext_3026 hypothetical protein YP_002422016.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3027 NAD-dependent epimerase/dehydratase YP_002422017.1 KEGG: mex:Mext_3028 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_002422018.1 KEGG: mex:Mext_3029 hypothetical protein YP_002422019.1 KEGG: mex:Mext_3030 hypothetical protein YP_002422020.1 KEGG: mex:Mext_3031 hypothetical protein YP_002422021.1 TIGRFAM: threonine dehydratase, biosynthetic; PFAM: threonine dehydratase domain protein; pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: mex:Mext_3032 threonine dehydratase, biosynthetic YP_002422022.1 PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_3033 type IV pilus assembly PilZ YP_002422023.1 PFAM: SlyX family protein; KEGG: mex:Mext_3034 SlyX family protein YP_002422024.1 KEGG: mex:Mext_3035 hypothetical protein YP_002422025.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: mex:Mext_3036 RNA polymerase-binding protein DksA YP_002422026.1 KEGG: mex:Mext_3037 hypothetical protein YP_002422027.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: mex:Mext_3038 membrane bound O-acyl transferase MBOAT family protein YP_002422028.1 KEGG: mex:Mext_3039 hypothetical protein YP_002422029.1 KEGG: mex:Mext_3040 hypothetical protein YP_002422030.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum YP_002422031.1 KEGG: mex:Mext_3042 hypothetical protein YP_002422032.1 KEGG: mex:Mext_3043 hypothetical protein YP_002422033.1 KEGG: mex:Mext_3044 hypothetical protein YP_002422034.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod YP_002422035.1 TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: mex:Mext_3046 flagella basal body P-ring formation protein FlgA YP_002422036.1 TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mex:Mext_3047 flagellar basal-body rod protein FlgG YP_002422037.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum YP_002422038.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring YP_002422039.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum YP_002422040.1 KEGG: mex:Mext_3051 hypothetical protein YP_002422041.1 KEGG: mex:Mext_3052 hypothetical protein YP_002422042.1 PFAM: glutathione peroxidase; KEGG: mex:Mext_3053 peroxiredoxin YP_002422043.1 PFAM: invasion associated locus B family protein; KEGG: mex:Mext_3054 invasion associated locus B family protein YP_002422044.1 TIGRFAM: lytic murein transglycosylase; PFAM: peptidoglycan-binding protein; KEGG: mex:Mext_3055 lytic murein transglycosylase YP_002422045.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mex:Mext_3056 NAD(P)H dehydrogenase (quinone) YP_002422046.1 PFAM: elongation factor G domain protein; elongation factor G domain IV; KEGG: mex:Mext_3057 elongation factor G domain-containing protein YP_002422047.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mex:Mext_3058 glutathione-dependent formaldehyde-activating GFA YP_002422048.1 PFAM: sodium:dicarboxylate symporter; KEGG: mex:Mext_3059 sodium:dicarboxylate symporter YP_002422049.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_3060 ATPase domain-containing protein YP_002422050.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: mex:Mext_3061 sigma-54 factor interaction domain-containing protein YP_002422051.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_3062 diguanylate cyclase YP_002422052.1 KEGG: mex:Mext_3063 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein YP_002422053.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: mex:Mext_3064 glutamyl-tRNA(Gln) amidotransferase subunit beta YP_002422054.1 KEGG: mpo:Mpop_3263 hypothetical protein YP_002422055.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mex:Mext_3065 cation diffusion facilitator family transporter YP_002422056.1 KEGG: mex:Mext_3066 hypothetical protein YP_002422057.1 KEGG: mex:Mext_3067 hypothetical protein YP_002422058.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mex:Mext_3068 monooxygenase FAD-binding YP_002422059.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step YP_002422060.1 PFAM: DNA polymerase beta domain protein region; KEGG: mex:Mext_3070 hypothetical protein YP_002422061.1 KEGG: mex:Mext_3071 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: queuine/other tRNA-ribosyltransferase YP_002422062.1 KEGG: mex:Mext_3072 hypothetical protein YP_002422063.1 KEGG: mex:Mext_3073 hypothetical protein YP_002422064.1 KEGG: mpo:Mpop_1338 hypothetical protein YP_002422065.1 KEGG: mrd:Mrad2831_5181 transposase of insertion sequence YP_002422066.1 KEGG: bpa:BPP2679 hypothetical protein YP_002422067.1 KEGG: xau:Xaut_0987 hypothetical protein YP_002422068.1 PFAM: OmpA/MotB domain protein; KEGG: xau:Xaut_0988 OmpA/MotB domain-containing protein YP_002422069.1 KEGG: xau:Xaut_0989 hypothetical protein YP_002422070.1 KEGG: lpf:lpl1068 hypothetical protein; PFAM: SNF2-related protein; helicase; SMART: DEAD-like helicases YP_002422071.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: rpb:RPB_1590 AAA_5 ATPase YP_002422072.1 PFAM: IQ calmodulin-binding- domain protein; KEGG: rpb:RPB_1591 hypothetical protein YP_002422075.1 PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: rle:pRL110096 hypothetical protein YP_002422076.1 KEGG: gbe:GbCGDNIH1_1519 hypothetical cytosolic protein YP_002422077.1 KEGG: nar:Saro_0264 hypothetical protein YP_002422078.1 KEGG: pap:PSPA7_5334 type II restriction enzyme, methylase subunit YP_002422082.1 KEGG: mpo:Mpop_1362 hypothetical protein YP_002422083.1 KEGG: mpo:Mpop_1363 hypothetical protein YP_002422084.1 KEGG: mpo:Mpop_1364 hypothetical protein YP_002422085.1 KEGG: mpo:Mpop_1365 hypothetical protein YP_002422086.1 PFAM: integrase family protein; KEGG: mex:Mext_3077 integrase family protein YP_002422088.1 KEGG: mex:Mext_0360 hypothetical protein YP_002422089.1 KEGG: mex:Mext_0153 hypothetical protein YP_002422092.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mpo:Mpop_2952 MucR family transcriptional regulator YP_002422095.1 KEGG: mex:Mext_0353 hypothetical protein YP_002422096.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: ccr:CC_0740 sensory box/GGDEF family protein YP_002422097.1 KEGG: met:M446_1053 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002422098.1 KEGG: mex:Mext_0802 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002422099.1 PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: mrd:Mrad2831_5229 anti-sigma-factor antagonist YP_002422100.1 PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: mrd:Mrad2831_5230 anti-sigma-factor antagonist YP_002422101.1 PFAM: ATP-binding region ATPase domain protein; KEGG: mrd:Mrad2831_5231 anti-sigma regulatory factor, serine/threonine protein kinase YP_002422102.1 PFAM: ATP-binding region ATPase domain protein; stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mrd:Mrad2831_5232 anti-sigma regulatory factor, serine/threonine protein kinase YP_002422103.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mrd:Mrad2831_5233 histidine kinase YP_002422104.1 KEGG: mex:Mext_1888 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002422105.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH YP_002422106.1 PFAM: formate C-acetyltransferase glycine radical; KEGG: mpo:Mpop_3748 hypothetical protein YP_002422107.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: scl:sce5286 methyltransferase YP_002422109.1 PFAM: sodium/hydrogen exchanger; KEGG: mrd:Mrad2831_6040 sodium/hydrogen exchanger YP_002422110.1 PFAM: protein of unknown function DUF421; KEGG: pla:Plav_3285 membrane protein-like protein YP_002422111.1 PFAM: sodium/hydrogen exchanger; KEGG: rru:Rru_A1350 sodium/hydrogen exchanger YP_002422112.1 PFAM: integrase family protein; KEGG: mex:Mext_0119 integrase family protein YP_002422113.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: mlo:mlr5983 transposase YP_002422114.1 KEGG: gbe:GbCGDNIH1_1776 hypothetical membrane associated protein YP_002422115.1 KEGG: nwi:Nwi_3091 hypothetical protein YP_002422116.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; KEGG: mex:Mext_0113 PAS sensor protein YP_002422117.1 PFAM: BLUF domain protein; KEGG: mex:Mext_0114 BLUF domain-containing protein YP_002422118.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: met:M446_1292 integral membrane sensor hybrid histidine kinase YP_002422119.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: aav:Aave_4017 alcohol dehydrogenase GroES domain protein YP_002422120.1 KEGG: aav:Aave_4018 hypothetical protein YP_002422122.1 KEGG: mex:Mext_0064 hypothetical protein YP_002422123.1 KEGG: mex:Mext_0063 hypothetical protein YP_002422124.1 KEGG: mex:Mext_0062 isochorismatase hydrolase YP_002422125.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: mrd:Mrad2831_2421 Crp/FNR family transcriptional regulator YP_002422126.1 KEGG: mex:Mext_0076 hypothetical protein YP_002422127.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_0788 cyclic nucleotide-binding YP_002422128.1 KEGG: mex:Mext_0787 hypothetical protein YP_002422129.1 KEGG: mex:Mext_0785 hypothetical protein YP_002422130.1 PFAM: integrase catalytic region; KEGG: mex:Mext_3531 integrase catalytic region YP_002422131.1 KEGG: mex:Mext_4708 hypothetical protein YP_002422132.1 KEGG: mpo:Mpop_3761 hypothetical protein YP_002422133.1 KEGG: mex:Mext_0782 hypothetical protein YP_002422134.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: response regulator receiver; KEGG: mex:Mext_0783 cyclic nucleotide-binding YP_002422135.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_0075 hypothetical protein YP_002422136.1 KEGG: mex:Mext_0785 hypothetical protein YP_002422137.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mrd:Mrad2831_2433 Crp/FNR family transcriptional regulator YP_002422142.1 KEGG: met:M446_6723 prophage CP4-57 regulatory YP_002422144.1 PFAM: integrase family protein; KEGG: rsq:Rsph17025_0112 phage integrase family protein YP_002422145.1 PFAM: tyrosine protein kinase; leucine-rich repeat protein; SMART: serine/threonine protein kinase; leucine-rich repeat-containing protein typical subtype; KEGG: mex:Mext_3080 serine/threonine protein kinase YP_002422146.1 PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: mex:Mext_3081 CHAD domain-containing protein YP_002422147.1 PFAM: adenylate cyclase; KEGG: mex:Mext_3082 adenylate cyclase YP_002422148.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mrd:Mrad2831_2093 ECF subfamily RNA polymerase sigma-24 factor YP_002422149.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: bbr:BB3301 hypothetical protein YP_002422150.1 PFAM: cupin; KEGG: bpt:Bpet3859 Nectarin 1 precursor YP_002422151.1 PFAM: ferredoxin; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_3083 adenylyl cyclase class-3/4/guanylyl cyclase YP_002422152.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3084 alpha/beta hydrolase fold YP_002422153.1 PFAM: major royal jelly protein; KEGG: mpo:Mpop_3279 hypothetical protein YP_002422154.1 KEGG: mex:Mext_3086 catalase YP_002422155.1 KEGG: mpo:Mpop_3280 hypothetical protein YP_002422156.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient YP_002422157.1 KEGG: mex:Mext_3089 hypothetical protein YP_002422158.1 KEGG: mex:Mext_3090 hypothetical protein YP_002422159.1 PFAM: aminotransferase class I and II; KEGG: mex:Mext_3091 aminotransferase YP_002422160.1 KEGG: mex:Mext_3092 hypothetical protein YP_002422161.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; poly-beta-hydroxybutyrate polymerase domain protein; KEGG: mex:Mext_3093 poly(R)-hydroxyalkanoic acid synthase, class I YP_002422162.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mex:Mext_3094 sodium/hydrogen exchanger YP_002422163.1 PFAM: regulatory protein LuxR; KEGG: mex:Mext_3095 regulatory protein LuxR YP_002422164.1 KEGG: mex:Mext_3096 glycyl-tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase subunit beta YP_002422165.1 PFAM: protein of unknown function DUF839; KEGG: mex:Mext_3097 hypothetical protein YP_002422166.1 KEGG: mex:Mext_3098 hypothetical protein YP_002422167.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_002422168.1 KEGG: mex:Mext_3100 hypothetical protein YP_002422169.1 KEGG: mex:Mext_3101 hypothetical protein YP_002422170.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_3102 regulatory protein TetR YP_002422171.1 PFAM: protein of unknown function DUF1348; KEGG: mex:Mext_3103 hypothetical protein YP_002422172.1 PFAM: peptidase S49; KEGG: mex:Mext_3105 peptidase S49 YP_002422173.1 PFAM: methyltransferase small; methyltransferase type 12; KEGG: mex:Mext_3106 methyltransferase small YP_002422174.1 KEGG: mex:Mext_3107 hypothetical protein YP_002422175.1 PFAM: polyprenyl synthetase; KEGG: mex:Mext_3108 polyprenyl synthetase YP_002422176.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis YP_002422177.1 PFAM: porin; KEGG: mex:Mext_3110 porin YP_002422178.1 PFAM: hypotheticalprotein; Tetratricopeptide TPR_2 repeat protein; SMART: hypothetical protein; KEGG: mex:Mext_3111 hypotheticalprotein YP_002422179.1 KEGG: mex:Mext_3112 hypothetical protein YP_002422180.1 KEGG: mex:Mext_3113 hypothetical protein YP_002422181.1 KEGG: mex:Mext_3114 hypothetical protein YP_002422182.1 KEGG: mex:Mext_3115 hypothetical protein YP_002422183.1 KEGG: mex:Mext_3116 Nrd protein YP_002422184.1 PFAM: band 7 protein; KEGG: mex:Mext_3117 band 7 protein YP_002422185.1 KEGG: mex:Mext_3118 cyclic peptide transporter; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter; SMART: ATPase AAA YP_002422186.1 KEGG: mpo:Mpop_3314 hypothetical protein YP_002422187.1 PFAM: PilT protein domain protein; KEGG: mpo:Mpop_3315 PilT protein domain protein YP_002422188.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_002422189.1 KEGG: mex:Mext_3120 hypothetical protein YP_002422190.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mex:Mext_3121 threonine aldolase YP_002422191.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3122 ABC transporter YP_002422192.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3123 major facilitator transporter YP_002422193.1 PFAM: PRC-barrel domain protein; KEGG: mex:Mext_3124 PRC-barrel domain-containing protein YP_002422194.1 KEGG: mex:Mext_3125 hypothetical protein YP_002422195.1 PFAM: PRC-barrel domain protein; KEGG: mex:Mext_3126 PRC-barrel domain-containing protein YP_002422196.1 PFAM: SWIB/MDM2 domain protein; KEGG: mex:Mext_3127 SWIB/MDM2 domain-containing protein YP_002422197.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3128 short-chain dehydrogenase/reductase SDR YP_002422198.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3129 major facilitator transporter YP_002422199.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3130 alpha/beta hydrolase fold YP_002422200.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mex:Mext_3131 6-phosphogluconate dehydrogenase NAD-binding YP_002422201.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_3132 glutathione S-transferase domain-containing protein YP_002422202.1 KEGG: mpo:Mpop_3330 hypothetical protein YP_002422203.1 PFAM: ETC complex I subunit conserved region; KEGG: mex:Mext_3134 ETC complex I subunit region YP_002422204.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mex:Mext_3135 CMP/dCMP deaminase zinc-binding YP_002422205.1 KEGG: mex:Mext_3136 radical SAM domain-containing protein YP_002422206.1 KEGG: mex:Mext_3137 hypothetical protein YP_002422207.1 KEGG: mex:Mext_3138 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_002422209.1 KEGG: mex:Mext_3139 histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002422210.1 KEGG: mex:Mext_3140 hypothetical protein YP_002422211.1 Converts isocitrate to alpha ketoglutarate YP_002422212.1 KEGG: mex:Mext_3142 hypothetical protein YP_002422213.1 PFAM: formaldehyde-activating enzyme (Fae); KEGG: mex:Mext_3143 formaldehyde-activating protein YP_002422214.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: mlo:mlr9262 hypothetical protein YP_002422215.1 PFAM: plasmid stabilization system; KEGG: smd:Smed_6483 addiction module toxin, RelE/StbE family YP_002422216.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mex:Mext_3144 RNA methyltransferase YP_002422217.1 KEGG: mpo:Mpop_3342 hypothetical protein YP_002422218.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_3146 alcohol dehydrogenase YP_002422219.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_3147 chemotaxis sensory transducer YP_002422220.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_3148 hypothetical protein YP_002422221.1 KEGG: mex:Mext_3149 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_002422222.1 PFAM: response regulator receiver; KEGG: mex:Mext_3150 response regulator receiver YP_002422223.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mex:Mext_3151 hypothetical protein YP_002422224.1 KEGG: mex:Mext_3152 hypothetical protein YP_002422225.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: mex:Mext_3153 alpha/beta hydrolase domain-containing protein YP_002422226.1 PFAM: helicase; DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase; SMART: DEAD-like helicases; KEGG: mex:Mext_3154 DEAD/DEAH box helicase domain-containing protein YP_002422227.1 KEGG: mex:Mext_3155 ICC-like phosphoesterase YP_002422228.1 KEGG: mex:Mext_3156 hypothetical protein YP_002422229.1 PFAM: chloride channel core; KEGG: mex:Mext_3157 chloride channel core YP_002422230.1 PFAM: protein of unknown function DUF1328; KEGG: mex:Mext_3158 hypothetical protein YP_002422231.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3159 short-chain dehydrogenase/reductase SDR YP_002422232.1 KEGG: mex:Mext_3160 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_002422233.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: mex:Mext_3161 transcription antitermination factor NusB YP_002422234.1 KEGG: mex:Mext_3162 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_002422235.1 PFAM: UbiA prenyltransferase; KEGG: mex:Mext_3163 hypothetical protein YP_002422236.1 PFAM: GtrA family protein; KEGG: mex:Mext_3164 GtrA family protein YP_002422237.1 KEGG: mex:Mext_3165 hypothetical protein YP_002422238.1 KEGG: mex:Mext_3166 hypothetical protein YP_002422239.1 TIGRFAM: riboflavin synthase, subunit alpha; PFAM: Lumazine-binding protein; KEGG: mex:Mext_3167 riboflavin synthase, alpha subunit YP_002422240.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: mex:Mext_3168 riboflavin biosynthesis protein RibD YP_002422241.1 PFAM: ATP-cone domain protein; KEGG: mex:Mext_3169 ATP-cone domain-containing protein YP_002422242.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mpo:Mpop_3365 transcriptional regulator, BadM/Rrf2 family YP_002422243.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_002422244.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: mex:Mext_3172 H+transporting two-sector ATPase B/B' subunit YP_002422245.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: mex:Mext_3173 H+transporting two-sector ATPase B/B' subunit YP_002422246.1 PFAM: H+transporting two-sector ATPase C subunit; KEGG: mex:Mext_3174 H+transporting two-sector ATPase C subunit YP_002422247.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 YP_002422248.1 KEGG: mex:Mext_3176 hypothetical protein YP_002422249.1 KEGG: mex:Mext_3177 DsbA oxidoreductase YP_002422250.1 PFAM: protein of unknown function DUF721; KEGG: mex:Mext_3178 hypothetical protein YP_002422251.1 KEGG: mex:Mext_3179 hypothetical protein YP_002422252.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; A/G-specific adenine glycosylase MutY; KEGG: mex:Mext_3180 A/G-specific adenine glycosylase YP_002422253.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mex:Mext_3181 DNA methylase N-4/N-6 domain-containing protein YP_002422254.1 TIGRFAM: lipoprotein A; PFAM: Rare lipoprotein A; KEGG: mex:Mext_3182 lipoprotein A YP_002422255.1 KEGG: mex:Mext_3183 hypothetical protein YP_002422256.1 KEGG: mex:Mext_3184 hypothetical protein YP_002422257.1 PFAM: SMC domain protein; ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3185 ABC transporter YP_002422258.1 PFAM: porin; KEGG: mex:Mext_3186 porin YP_002422259.1 KEGG: mex:Mext_3187 hypothetical protein YP_002422260.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_3188 adenylyl cyclase class-3/4/guanylyl cyclase YP_002422261.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: mex:Mext_3189 metal-dependent phosphohydrolase YP_002422262.1 PFAM: lytic transglycosylase catalytic; KEGG: mex:Mext_3190 lytic transglycosylase catalytic YP_002422263.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_002422264.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_002422265.1 PFAM: protein of unknown function DUF88; KEGG: mex:Mext_3193 hypothetical protein YP_002422266.1 TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: mex:Mext_3194 orotate phosphoribosyltransferase YP_002422267.1 KEGG: mex:Mext_3195 hypothetical protein YP_002422268.1 KEGG: mex:Mext_3196 RelA/SpoT family protein; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region YP_002422269.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and subunit alphas YP_002422270.1 PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: mex:Mext_3198 scaffold protein Nfu/NifU YP_002422271.1 PFAM: peptidase M22 glycoprotease; KEGG: mex:Mext_3199 peptidase M22 glycoprotease YP_002422272.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpo:Mpop_3396 GCN5-related N-acetyltransferase YP_002422273.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mex:Mext_3201 phospholipid/glycerol acyltransferase YP_002422274.1 PFAM: MEKHLA domain protein; KEGG: mex:Mext_3202 MEKHLA domain-containing protein YP_002422275.1 PFAM: membrane-flanked domain; KEGG: mex:Mext_3203 hypothetical protein YP_002422276.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_002422277.1 PFAM: PhoH family protein; KEGG: mex:Mext_3205 PhoH family protein YP_002422278.1 PFAM: protein of unknown function UPF0054; KEGG: mex:Mext_3206 hypothetical protein YP_002422279.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: mex:Mext_3207 CBS domain-containing protein YP_002422280.1 transfers the fatty acyl group on membrane lipoproteins YP_002422281.1 PFAM: BA14K family protein; KEGG: mex:Mext_3209 hypothetical protein YP_002422282.1 PFAM: catalase; KEGG: mex:Mext_3210 catalase YP_002422283.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3211 LysR substrate-binding YP_002422284.1 TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase; KEGG: mex:Mext_3212 membrane protein AbrB duplication YP_002422285.1 PFAM: diacylglycerol kinase; KEGG: mex:Mext_3213 diacylglycerol kinase YP_002422286.1 KEGG: mex:Mext_3214 hypothetical protein YP_002422287.1 KEGG: mex:Mext_3215 hypothetical protein YP_002422288.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_3216 metallophosphoesterase YP_002422289.1 KEGG: mex:Mext_3217 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_002422290.1 PFAM: protein of unknown function DUF323; KEGG: mex:Mext_3218 hypothetical protein YP_002422291.1 TIGRFAM: methyltransferase; KEGG: mex:Mext_3219 hypothetical protein YP_002422292.1 KEGG: mex:Mext_3220 hypothetical protein YP_002422293.1 PFAM: protein of unknown function DUF779; KEGG: mex:Mext_3221 hypothetical protein YP_002422294.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mex:Mext_3222 nitrate reductase YP_002422295.1 TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_3223 uroporphyrin-III C-methyltransferase YP_002422296.1 PFAM: electron transporter SCO1/SenC; KEGG: mex:Mext_3224 electron transporter SCO1/SenC YP_002422297.1 KEGG: mex:Mext_3225 glycosyl transferase YP_002422298.1 PFAM: extracellular solute-binding protein family 3; KEGG: mex:Mext_3226 extracellular solute-binding protein YP_002422299.1 KEGG: mex:Mext_3227 hypothetical protein YP_002422300.1 KEGG: mex:Mext_3228 hypothetical protein YP_002422301.1 KEGG: mex:Mext_3229 cobalt chelatase, pCobT subunit; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit; SMART: von Willebrand factor type A YP_002422302.1 KEGG: mex:Mext_3230 cobalt chelatase, pCobS small subunit; TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities AAA_5 YP_002422303.1 PFAM: heat shock protein DnaJ domain protein; KEGG: mex:Mext_3231 heat shock protein DnaJ domain-containing protein YP_002422304.1 PFAM: BolA family protein; KEGG: mex:Mext_3232 BolA family protein YP_002422305.1 PFAM: class I peptide chain release factor; KEGG: mex:Mext_3233 class I peptide chain release factor YP_002422306.1 PFAM: protein of unknown function DUF1275; KEGG: mex:Mext_3234 hypothetical protein YP_002422307.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_3235 methyltransferase type 12 YP_002422308.1 KEGG: mex:Mext_3236 mRNA 3-end processing factor YP_002422309.1 PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: mex:Mext_3237 ATP dependent DNA ligase YP_002422310.1 PFAM: protein of unknown function UPF0047; KEGG: mex:Mext_3238 hypothetical protein YP_002422311.1 PFAM: protein of unknown function DUF606; KEGG: mex:Mext_3239 hypothetical protein YP_002422312.1 PFAM: protein of unknown function UPF0057; KEGG: mex:Mext_3240 hypothetical protein YP_002422313.1 PFAM: enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mex:Mext_3241 3-hydroxyacyl-CoA dehydrogenase NAD-binding YP_002422314.1 PFAM: EAL domain protein; KEGG: mex:Mext_3242 EAL domain-containing protein YP_002422315.1 KEGG: mex:Mext_3243 hypothetical protein YP_002422316.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_002422317.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mex:Mext_3245 acyl-CoA dehydrogenase domain-containing protein YP_002422318.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_3246 Sel1 domain-containing protein YP_002422319.1 KEGG: mex:Mext_3247 hypothetical protein YP_002422320.1 KEGG: mex:Mext_3248 hypothetical protein YP_002422321.1 KEGG: mex:Mext_3249 hypothetical protein YP_002422322.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: mex:Mext_3250 phosphoesterase PA-phosphatase related YP_002422323.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: mex:Mext_3251 oxidoreductase domain-containing protein YP_002422324.1 KEGG: mex:Mext_3252 hypothetical protein YP_002422325.1 PFAM: peptidase M16 domain protein; KEGG: mex:Mext_3253 processing peptidase YP_002422326.1 KEGG: mex:Mext_3254 threonine synthase; TIGRFAM: threonine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_002422327.1 KEGG: mex:Mext_3255 hypothetical protein YP_002422328.1 PFAM: Surfeit locus 1 family protein; KEGG: mex:Mext_3256 surfeit locus 1 family protein YP_002422329.1 PFAM: protein of unknown function DUF983; KEGG: mex:Mext_3257 hypothetical protein YP_002422330.1 PFAM: cytochrome C oxidase subunit III; KEGG: mex:Mext_3258 cytochrome C oxidase subunit III YP_002422331.1 PFAM: cytochrome C oxidase assembly protein CtaG/Cox11; KEGG: mex:Mext_3259 cytochrome C oxidase assembly protein CtaG/Cox11 YP_002422332.1 KEGG: mex:Mext_3260 protein CoxF YP_002422333.1 converts protoheme IX and farnesyl diphosphate to heme O YP_002422334.1 KEGG: mex:Mext_3262 cytochrome C oxidase subunit I; TIGRFAM: cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I YP_002422335.1 KEGG: mex:Mext_3263 cytochrome C oxidase subunit II; TIGRFAM: cytochrome C oxidase subunit II; PFAM: cytochrome C oxidase subunit II; cytochrome C oxidase subunit II transmembrane region YP_002422336.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: mex:Mext_3264 formate dehydrogenase family accessory protein FdhD YP_002422337.1 KEGG: mex:Mext_3265 hypothetical protein YP_002422338.1 PFAM: glutamine amidotransferase class-II; glutamate synthase subunit alpha domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: mex:Mext_3266 glutamate synthase (ferredoxin) YP_002422339.1 glutamate synthase is composed of subunits alpha and beta; subunit beta is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the subunit alpha, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate YP_002422340.1 PFAM: beta-lactamase; KEGG: mex:Mext_3268 beta-lactamase domain-containing protein YP_002422341.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mex:Mext_3269 ATPase domain-containing protein YP_002422342.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_3270 response regulator receiver YP_002422343.1 PFAM: protein of unknown function DUF459; KEGG: mex:Mext_3271 hypothetical protein YP_002422344.1 TIGRFAM: lytic murein transglycosylase; PFAM: peptidoglycan-binding protein; KEGG: mex:Mext_3272 lytic murein transglycosylase YP_002422345.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3273 UDP-glucose 4-epimerase YP_002422346.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; KEGG: mex:Mext_3274 UTP-glucose-1-phosphate uridylyltransferase YP_002422347.1 PFAM: N-formylglutamate amidohydrolase; KEGG: mex:Mext_3275 N-formylglutamate amidohydrolase YP_002422348.1 PFAM: response regulator receiver; KEGG: mpo:Mpop_3474 response regulator receiver protein YP_002422349.1 TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: mex:Mext_3277 glutaredoxin 3 YP_002422350.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mex:Mext_3278 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_002422351.1 PFAM: protein of unknown function DUF1178; KEGG: mex:Mext_3279 hypothetical protein YP_002422352.1 KEGG: mex:Mext_3280 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002422353.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A; KEGG: mex:Mext_3281 peptide methionine sulfoxide reductase YP_002422354.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_3282 hypothetical protein YP_002422355.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm YP_002422356.1 PFAM: PRC-barrel domain protein; KEGG: mex:Mext_3285 PRC-barrel domain-containing protein YP_002422357.1 KEGG: mex:Mext_3286 hypothetical protein YP_002422358.1 PFAM: Na+/H+ antiporter NhaA; KEGG: mex:Mext_3287 Na+/H+ antiporter NhaA YP_002422359.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: mex:Mext_3288 redoxin domain-containing protein YP_002422360.1 TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: mex:Mext_3289 argininosuccinate lyase YP_002422361.1 KEGG: mex:Mext_3290 hypothetical protein YP_002422362.1 KEGG: mex:Mext_3291 hypothetical protein YP_002422363.1 KEGG: mex:Mext_3292 hypothetical protein YP_002422364.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_3293 HAD family hydrolase YP_002422365.1 PFAM: carbamoyltransferase; KEGG: mex:Mext_3294 carbamoyltransferase YP_002422366.1 KEGG: mex:Mext_3295 hypothetical protein YP_002422367.1 KEGG: mex:Mext_3296 haloacid dehalogenase, type II; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_002422368.1 TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: mex:Mext_3297 integral membrane protein MviN YP_002422369.1 PFAM: manganese and iron superoxide dismutase; KEGG: mex:Mext_3298 superoxide dismutase YP_002422370.1 KEGG: mex:Mext_3299 hypothetical protein YP_002422371.1 KEGG: mex:Mext_3300 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002422372.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_3301 glycosyl transferase YP_002422373.1 KEGG: mex:Mext_3302 rhamnosyltransferase YP_002422374.1 PFAM: peptidase M48 Ste24p; KEGG: mex:Mext_3303 peptidase M48 Ste24p YP_002422375.1 KEGG: mex:Mext_3304 hypothetical protein YP_002422376.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_3305 helix-turn-helix domain-containing protein YP_002422377.1 PFAM: S-adenosylmethionine synthetase; KEGG: mex:Mext_3306 methionine adenosyltransferase YP_002422378.1 KEGG: mex:Mext_3307 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase YP_002422379.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity YP_002422380.1 PFAM: oxidoreductase molybdopterin binding; KEGG: mex:Mext_3309 oxidoreductase molybdopterin binding YP_002422381.1 KEGG: mex:Mext_3310 transmembrane b-type cytochrome protein YP_002422382.1 KEGG: mex:Mext_3311 hypothetical protein YP_002422383.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_002422384.1 KEGG: mex:Mext_3313 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase; PFAM: amidohydrolase; amidohydrolase YP_002422385.1 PFAM: protein of unknown function DUF205; KEGG: mex:Mext_3314 hypothetical protein YP_002422386.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: mex:Mext_3315 DNA protecting protein DprA YP_002422388.1 PFAM: lipolytic protein G-D-S-L family; KEGG: mex:Mext_3316 GDSL family lipase YP_002422389.1 KEGG: mex:Mext_3317 hypothetical protein YP_002422390.1 PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_3318 ThiJ/PfpI domain-containing protein YP_002422391.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: mex:Mext_3319 Holliday junction resolvase YqgF YP_002422392.1 KEGG: mex:Mext_3320 hypothetical protein YP_002422393.1 KEGG: mex:Mext_3321 hypothetical protein YP_002422394.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: mex:Mext_3322 glutamyl-tRNA(Gln) amidotransferase subunit C YP_002422395.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_002422396.1 KEGG: mex:Mext_3324 hypothetical protein YP_002422397.1 PFAM: excinuclease ABC C subunit domain protein; KEGG: mpo:Mpop_3525 excinuclease ABC C subunit domain protein YP_002422398.1 TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_3326 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_002422399.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_3327 RND family efflux transporter MFP subunit YP_002422400.1 KEGG: mex:Mext_3328 hypothetical protein YP_002422401.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_3329 ErfK/YbiS/YcfS/YnhG family protein YP_002422402.1 KEGG: mex:Mext_3330 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_002422403.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: mex:Mext_3331 2OG-Fe(II) oxygenase YP_002422405.1 PFAM: Usg family protein; KEGG: mex:Mext_3333 Usg family protein YP_002422406.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: mex:Mext_3334 chaperonin GroEL YP_002422407.1 PFAM: chaperonin Cpn10; KEGG: mex:Mext_3335 chaperonin Cpn10 YP_002422408.1 PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3336 acyl-CoA dehydrogenase type 2 YP_002422409.1 KEGG: mex:Mext_3337 hypothetical protein YP_002422410.1 KEGG: mex:Mext_3338 ABC-type nitrate/sulfonate/bicarbonate transporters periplasmic components-like protein YP_002422411.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: mex:Mext_3339 oxidoreductase molybdopterin binding YP_002422412.1 KEGG: mex:Mext_3340 cytochrome C, class I YP_002422413.1 KEGG: mex:Mext_3341 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: substrate-binding region of ABC-type glycine betaine transporter; SMART: extracellular solute-binding protein family 3 YP_002422414.1 PFAM: monooxygenase; KEGG: mex:Mext_3342 alkanesulfonate monooxygenase YP_002422415.1 TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: mex:Mext_3343 xanthine permease YP_002422416.1 PFAM: DSBA oxidoreductase; KEGG: mex:Mext_3344 DsbA oxidoreductase YP_002422417.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3345 ABC transporter YP_002422418.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3346 binding-protein-dependent transport systems inner membrane component YP_002422419.1 KEGG: mex:Mext_3347 ABC transporter substrate-binding protein YP_002422420.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_3348 cyclic nucleotide-binding YP_002422421.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: mex:Mext_3349 heat domain-containing protein YP_002422422.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mex:Mext_3350 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002422423.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: mex:Mext_3351 oxidoreductase YP_002422424.1 PFAM: protein of unknown function DUF971; KEGG: mex:Mext_3352 hypothetical protein YP_002422425.1 KEGG: mex:Mext_3353 hypothetical protein YP_002422426.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_3354 diguanylate cyclase YP_002422427.1 KEGG: mex:Mext_3355 hypothetical protein YP_002422428.1 aliphatic amidase; catalyzes the hydrolysis of short-chain aliphatic amides to their organic acids and can also transfer the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates YP_002422429.1 PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_3373 carbohydrate-selective porin OprB YP_002422430.1 TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB; KEGG: mex:Mext_3374 FmdB family regulatory protein YP_002422431.1 PFAM: acetamidase/formamidase; KEGG: mex:Mext_3375 formamidase YP_002422432.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3376 hypothetical protein YP_002422433.1 KEGG: mex:Mext_3377 UreA ABC transporter ATP-binding protein UrtE; TIGRFAM: urea ABC transporter ATP-binding protein UrtE; PFAM: ABC transporter; SMART: ATPase AAA YP_002422434.1 TIGRFAM: urea ABC transporter ATP-binding protein UrtD; PFAM: ABC transporter; KEGG: mex:Mext_3378 UreA ABC transporter ATP-binding protein UrtD YP_002422435.1 TIGRFAM: urea ABC transporter permease UrtC; PFAM: inner-membrane translocator; KEGG: mex:Mext_3379 UreA ABC transporter permease UrtC YP_002422436.1 TIGRFAM: urea ABC transporter permease UrtB; PFAM: inner-membrane translocator; KEGG: mex:Mext_3380 UreA ABC transporter permease UrtB YP_002422437.1 TIGRFAM: urea ABC transporter urea binding protein; KEGG: mex:Mext_3381 ABC transporter substrate-binding protein YP_002422438.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_3382 ATPase domain-containing protein YP_002422439.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_3383 response regulator receiver YP_002422440.1 PFAM: invasion associated locus B family protein; KEGG: mex:Mext_3384 invasion associated locus B family protein YP_002422441.1 catalyzes the formation of precorrin 6x from precorrin 5 YP_002422442.1 KEGG: mex:Mext_3386 hypothetical protein YP_002422443.1 KEGG: mex:Mext_3387 hypothetical protein YP_002422444.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: mex:Mext_3388 cobyrinic acid ac-diamide synthase YP_002422445.1 KEGG: mex:Mext_3389 hypothetical protein YP_002422446.1 TIGRFAM: lipoprotein A; PFAM: Rare lipoprotein A; KEGG: mex:Mext_3390 lipoprotein A YP_002422447.1 KEGG: mex:Mext_3391 hypothetical protein YP_002422448.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: mex:Mext_3392 iron-sulfur cluster assembly accessory protein YP_002422449.1 KEGG: mex:Mext_3393 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002422450.1 KEGG: mex:Mext_3394 hypothetical protein YP_002422451.1 PFAM: thioesterase superfamily protein; KEGG: mex:Mext_3395 thioesterase superfamily protein YP_002422452.1 KEGG: mex:Mext_3396 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase YP_002422453.1 PFAM: sporulation domain protein; KEGG: mex:Mext_3397 sporulation domain-containing protein YP_002422454.1 PFAM: glycoside hydrolase; KEGG: mex:Mext_3398 beta-N-acetylhexosaminidase YP_002422455.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_002422456.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: mex:Mext_3400 twin-arginine translocation protein, TatB subunit YP_002422457.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: mex:Mext_3401 sec-independent protein translocase, TatC subunit YP_002422458.1 KEGG: mex:Mext_3402 hypothetical protein YP_002422459.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3403 major facilitator transporter YP_002422460.1 PFAM: NADPH-dependent FMN reductase; KEGG: mex:Mext_3404 NADPH-dependent FMN reductase YP_002422461.1 KEGG: mex:Mext_3405 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: substrate-binding region of ABC-type glycine betaine transporter; SMART: extracellular solute-binding protein family 3 YP_002422462.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3406 binding-protein-dependent transport systems inner membrane component YP_002422463.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3407 ABC transporter YP_002422464.1 PFAM: monooxygenase; KEGG: mex:Mext_3408 alkanesulfonate monooxygenase YP_002422465.1 KEGG: mex:Mext_3409 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: substrate-binding region of ABC-type glycine betaine transporter; SMART: extracellular solute-binding protein family 3 YP_002422466.1 KEGG: mex:Mext_3410 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: substrate-binding region of ABC-type glycine betaine transporter; SMART: extracellular solute-binding protein family 3 YP_002422467.1 KEGG: mex:Mext_3411 pyridine nucleotide-disulfide oxidoreductase family protein YP_002422468.1 KEGG: mex:Mext_3412 hypothetical protein YP_002422469.1 KEGG: mex:Mext_3413 hypothetical protein YP_002422470.1 KEGG: mex:Mext_3414 hypothetical protein YP_002422471.1 PFAM: transglutaminase; transglutaminase domain protein; KEGG: mex:Mext_3415 transglutaminase domain-containing protein YP_002422472.1 PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mex:Mext_3416 hypothetical protein YP_002422473.1 PFAM: transglutaminase; transglutaminase domain protein; KEGG: mex:Mext_3417 transglutaminase domain-containing protein YP_002422474.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_3418 regulatory protein TetR YP_002422475.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3419 short-chain dehydrogenase/reductase SDR YP_002422476.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3420 major facilitator transporter YP_002422477.1 KEGG: mex:Mext_3421 hypothetical protein YP_002422478.1 PFAM: beta-lactamase; KEGG: mex:Mext_3422 beta-lactamase YP_002422479.1 PFAM: aldehyde dehydrogenase; KEGG: mex:Mext_3423 aldehyde dehydrogenase YP_002422480.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_3424 chemotaxis sensory transducer YP_002422481.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mex:Mext_3425 Orn/DAP/Arg decarboxylase 2 YP_002422482.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_3426 AMP-dependent synthetase and ligase YP_002422483.1 KEGG: mex:Mext_3427 hypothetical protein YP_002422484.1 PFAM: DoxX family protein; KEGG: mex:Mext_3428 DoxX family protein YP_002422485.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3429 major facilitator transporter YP_002422486.1 KEGG: mex:Mext_3430 hypothetical protein YP_002422487.1 PFAM: amidohydrolase; KEGG: mex:Mext_3431 adenine deaminase YP_002422488.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: mex:Mext_3432 ribosomal RNA methyltransferase RrmJ/FtsJ YP_002422489.1 PFAM: Ppx/GppA phosphatase; KEGG: mex:Mext_3433 Ppx/GppA phosphatase YP_002422490.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_3434 glycosyl transferase YP_002422491.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mex:Mext_3435 phospholipid/glycerol acyltransferase YP_002422492.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_3436 phytoene desaturase YP_002422493.1 PFAM: glutamine amidotransferase class-I; KEGG: mex:Mext_3437 glutamine amidotransferase class-I YP_002422494.1 PFAM: ABC transporter; KEGG: mex:Mext_3438 ABC-2 type transporter YP_002422495.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3439 ABC transporter YP_002422496.1 KEGG: mex:Mext_3440 hypothetical protein YP_002422497.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_3441 phytoene desaturase YP_002422498.1 KEGG: mex:Mext_3442 hypothetical protein YP_002422499.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mex:Mext_3443 tRNA/rRNA methyltransferase (SpoU) YP_002422500.1 PFAM: MaoC domain protein dehydratase; KEGG: mex:Mext_3444 dehydratase YP_002422501.1 PFAM: cation efflux protein; KEGG: mex:Mext_3445 cation efflux protein YP_002422502.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_3446 metallophosphoesterase YP_002422503.1 KEGG: mex:Mext_3447 hypothetical protein YP_002422504.1 KEGG: mex:Mext_3448 hypothetical protein YP_002422505.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_3449 glutathione S-transferase domain-containing protein YP_002422506.1 KEGG: mex:Mext_3450 hypothetical protein YP_002422507.1 PFAM: amidinotransferase; KEGG: mex:Mext_3451 non-specific serine/threonine protein kinase YP_002422508.1 TIGRFAM: membrane protein; PFAM: conserved hypothetical protein; KEGG: mex:Mext_3452 membrane protein YP_002422509.1 PFAM: toluene tolerance family protein; KEGG: mex:Mext_3453 toluene tolerance family protein YP_002422510.1 TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; KEGG: mex:Mext_3454 glucosyltransferase YP_002422511.1 KEGG: mex:Mext_3455 hopanoid biosynthesis associated radical SAM protein HpnJ; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_002422512.1 TIGRFAM: hopanoid biosynthesis associated protein HpnK; PFAM: YdjC family protein; KEGG: mex:Mext_3456 hopanoid biosynthesis associated protein HpnK YP_002422513.1 KEGG: mex:Mext_3457 hypothetical protein YP_002422514.1 TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: mpo:Mpop_3657 hopanoid biosynthesis associated RND transporter like protein HpnN YP_002422515.1 TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: radical SAM protein; KEGG: mex:Mext_3460 hopanoid biosynthesis associated radical SAM protein HpnH YP_002422516.1 TIGRFAM: hopanoid-associated phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: mex:Mext_3461 hypothetical protein YP_002422517.1 PFAM: polysaccharide export protein; KEGG: mex:Mext_3462 polysaccharide export protein YP_002422518.1 KEGG: mex:Mext_3463 carbohydrate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase YP_002422519.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: mex:Mext_3464 Cof-like hydrolase YP_002422520.1 PFAM: lytic transglycosylase catalytic; KEGG: mex:Mext_3465 lytic transglycosylase catalytic YP_002422521.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_002422522.1 KEGG: mex:Mext_3467 hypothetical protein YP_002422523.1 TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: mex:Mext_3468 polyhydroxyalkanoate synthesis repressor PhaR YP_002422524.1 KEGG: mex:Mext_3469 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase YP_002422525.1 TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3470 acetoacetyl-CoA reductase YP_002422526.1 acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA YP_002422527.1 PFAM: peptidase M29 aminopeptidase II; KEGG: mex:Mext_3472 peptidase M29 aminopeptidase II YP_002422528.1 KEGG: mex:Mext_3473 hypothetical protein YP_002422529.1 PFAM: FAD linked oxidase; KEGG: mex:Mext_3474 FAD linked oxidase domain-containing protein YP_002422530.1 PFAM: fumarylacetoacetate hydrolase; KEGG: mex:Mext_3475 fumarylacetoacetate hydrolase YP_002422531.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_3476 NUDIX hydrolase YP_002422532.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mex:Mext_3477 DegT/DnrJ/EryC1/StrS aminotransferase YP_002422533.1 PFAM: Resolvase domain; KEGG: mex:Mext_3478 resolvase domain-containing protein YP_002422534.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3479 regulatory protein LysR YP_002422535.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_3480 cyclic nucleotide-binding YP_002422536.1 KEGG: mex:Mext_3481 hypothetical protein YP_002422537.1 KEGG: mex:Mext_3482 hypothetical protein YP_002422538.1 KEGG: mex:Mext_3483 hypothetical protein YP_002422539.1 PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3484 acyl-CoA dehydrogenase type 2 YP_002422540.1 PFAM: OsmC family protein; KEGG: mex:Mext_3485 OsmC family protein YP_002422541.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3486 binding-protein-dependent transport systems inner membrane component YP_002422542.1 KEGG: mex:Mext_3487 twin-arginine translocation pathway signal YP_002422543.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3488 ABC transporter YP_002422544.1 PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_3489 carbohydrate-selective porin OprB YP_002422545.1 KEGG: mex:Mext_3490 monooxygenase YP_002422546.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3491 ABC transporter YP_002422547.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_3492 inner-membrane translocator YP_002422548.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_3493 inner-membrane translocator YP_002422549.1 KEGG: mex:Mext_3494 hypothetical protein YP_002422550.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3495 ABC transporter YP_002422551.1 PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3496 acyl-CoA dehydrogenase type 2 YP_002422552.1 PFAM: heat shock protein Hsp20; KEGG: mex:Mext_3498 heat shock protein HSP20 YP_002422553.1 PFAM: UspA domain protein; KEGG: mex:Mext_3500 UspA domain-containing protein YP_002422554.1 KEGG: mex:Mext_3501 hypothetical protein YP_002422555.1 PFAM: transport-associated; KEGG: mex:Mext_3502 transport-associated YP_002422556.1 KEGG: mex:Mext_3503 hypothetical protein YP_002422557.1 PFAM: UspA domain protein; KEGG: mex:Mext_3504 UspA domain-containing protein YP_002422558.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_3505 regulatory protein Crp YP_002422559.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mex:Mext_3506 response regulator receiver YP_002422560.1 KEGG: mex:Mext_3507 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002422561.1 PFAM: UspA domain protein; KEGG: mex:Mext_3508 UspA domain-containing protein YP_002422562.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mex:Mext_3509 metal-dependent phosphohydrolase YP_002422563.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: mex:Mext_3510 ATPase domain-containing protein YP_002422564.1 KEGG: mex:Mext_3511 hypothetical protein YP_002422565.1 PFAM: TadE family protein; KEGG: mex:Mext_3512 TadE family protein YP_002422566.1 PFAM: TadE family protein; KEGG: mex:Mext_3513 TadE family protein YP_002422567.1 KEGG: mpo:Mpop_4259 hypothetical protein YP_002422568.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: gox:GOX1539 acetyltransferase YP_002422569.1 PFAM: adenylylsulfate kinase; KEGG: mrd:Mrad2831_1882 adenylyl-sulfate kinase YP_002422570.1 KEGG: mex:Mext_0808 hypothetical protein YP_002422571.1 KEGG: mex:Mext_0807 hypothetical protein YP_002422572.1 KEGG: mpo:Mpop_3761 hypothetical protein YP_002422573.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4463 ROSMUCR transcriptional regulator YP_002422576.1 KEGG: mex:Mext_4382 hypothetical protein YP_002422577.1 KEGG: mex:Mext_4382 hypothetical protein YP_002422578.1 PFAM: peptidoglycan-binding protein; KEGG: mex:Mext_4383 peptidoglycan binding domain-containing protein YP_002422580.1 KEGG: azc:AZC_2161 hypothetical protein YP_002422581.1 KEGG: mrd:Mrad2831_4981 hypothetical protein YP_002422583.1 KEGG: mpo:Mpop_4259 hypothetical protein YP_002422584.1 KEGG: azc:AZC_0734 hypothetical protein YP_002422585.1 KEGG: mrd:Mrad2831_5645 hypothetical protein YP_002422586.1 KEGG: mpo:Mpop_3765 hypothetical protein YP_002422587.1 KEGG: mpo:Mpop_4256 hypothetical protein YP_002422588.1 PFAM: ABC transporter; KEGG: mpo:Mpop_2382 ABC-2 type transporter YP_002422589.1 KEGG: met:M446_0253 capsular polysaccharide biosynthesis protein-like protein YP_002422591.1 KEGG: mpo:Mpop_4886 hypothetical protein YP_002422592.1 KEGG: mrd:Mrad2831_5670 hypothetical protein YP_002422593.1 KEGG: mrd:Mrad2831_5671 hypothetical protein YP_002422594.1 KEGG: mrd:Mrad2831_5672 hypothetical protein YP_002422595.1 KEGG: eli:ELI_07940 bacteriophage-acquired protein YP_002422596.1 KEGG: mpo:Mpop_4404 capsular polysaccharide biosynthesis protein-like protein YP_002422597.1 PFAM: Rare lipoprotein A; KEGG: cyt:cce_3687 hypothetical protein YP_002422598.1 KEGG: mlo:mll4444 hypothetical protein YP_002422600.1 KEGG: swi:Swit_4452 hypothetical protein YP_002422601.1 KEGG: mca:MCA1228 TolA protein YP_002422604.1 KEGG: nar:Saro_3000 hypothetical protein YP_002422605.1 KEGG: bvi:Bcep1808_1171 hypothetical protein YP_002422606.1 KEGG: mpo:Mpop_2745 hypothetical protein YP_002422608.1 KEGG: met:M446_4072 hypothetical protein YP_002422609.1 PFAM: integrase family protein; KEGG: nha:Nham_3311 phage integrase YP_002422610.1 KEGG: mex:Mext_3583 hypothetical protein YP_002422613.1 KEGG: mpo:Mpop_1569 hypothetical protein YP_002422614.1 KEGG: mex:Mext_3584 hypothetical protein YP_002422615.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_3585 endonuclease/exonuclease/phosphatase YP_002422616.1 PFAM: protein of unknown function DUF159; KEGG: mex:Mext_3586 hypothetical protein YP_002422617.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_3587 ErfK/YbiS/YcfS/YnhG family protein YP_002422618.1 KEGG: mex:Mext_3588 hypothetical protein YP_002422619.1 KEGG: mex:Mext_3589 hypothetical protein YP_002422620.1 KEGG: mex:Mext_3590 hypothetical protein YP_002422621.1 KEGG: mex:Mext_3591 hypothetical protein YP_002422622.1 KEGG: mpo:Mpop_4880 hypothetical protein YP_002422623.1 KEGG: mex:Mext_3592 hypothetical protein YP_002422624.1 KEGG: mex:Mext_3593 hypothetical protein YP_002422625.1 KEGG: mex:Mext_3594 hypothetical protein YP_002422626.1 KEGG: mpo:Mpop_4270 hypothetical protein YP_002422627.1 KEGG: mex:Mext_3595 hypothetical protein YP_002422628.1 transcriptional regulator that represses the manganese transporter MntH when manganese is present YP_002422629.1 TIGRFAM: Mn2+/Fe2+ transporter NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: mex:Mext_3597 Mn2+/Fe2+ transporter YP_002422630.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3598 LysR substrate-binding YP_002422631.1 PFAM: sodium/sulfate symporter; citrate transporter; KEGG: mex:Mext_3599 sodium/sulfate symporter YP_002422632.1 TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: mex:Mext_3600 succinate dehydrogenase, cytochrome b556 subunit YP_002422633.1 TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: mpo:Mpop_4277 succinate dehydrogenase, hydrophobic membrane anchor protein YP_002422634.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_002422635.1 KEGG: mex:Mext_3603 hypothetical protein YP_002422636.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: mex:Mext_3604 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_002422637.1 KEGG: mex:Mext_3605 outer membrane lipoprotein omp19 YP_002422638.1 KEGG: mex:Mext_3606 hypothetical protein YP_002422639.1 KEGG: mex:Mext_3607 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS) YP_002422641.1 PFAM: protein of unknown function DUF606; KEGG: mex:Mext_3609 hypothetical protein YP_002422642.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: mex:Mext_3610 enoyl-CoA hydratase/isomerase YP_002422643.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3611 short-chain dehydrogenase/reductase SDR YP_002422644.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3612 short-chain dehydrogenase/reductase SDR YP_002422645.1 TIGRFAM: magnesium and cobalt transporter CorA; PFAM: Mg+2 transporter protein CorA; KEGG: mex:Mext_3613 magnesium and cobalt transporter CorA YP_002422646.1 PFAM: protein of unknown function DUF892; KEGG: mex:Mext_3614 hypothetical protein YP_002422647.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0667 chemotaxis sensory transducer YP_002422648.1 KEGG: mex:Mext_3617 hypothetical protein YP_002422649.1 KEGG: mex:Mext_3618 hypothetical protein YP_002422650.1 KEGG: mex:Mext_3619 hypothetical protein YP_002422651.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: mex:Mext_3620 4-oxalocrotonate tautomerase YP_002422652.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3621 regulatory protein LysR YP_002422653.1 KEGG: sus:acid_3821 CopG/Arc/MetJ family transcriptional regulator YP_002422654.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; KEGG: mex:Mext_3622 PAS sensor protein YP_002422655.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_3623 regulatory protein TetR YP_002422656.1 KEGG: mex:Mext_3624 hypothetical protein YP_002422657.1 KEGG: mex:Mext_3625 DNA-(apurinic or apyrimidinic site) lyase; PFAM: HhH-GPD family protein; SMART: iron-sulfur cluster loop YP_002422658.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3626 short-chain dehydrogenase/reductase SDR YP_002422659.1 PFAM: beta-Ig-H3/fasciclin; KEGG: mex:Mext_3627 beta-Ig-H3/fasciclin YP_002422660.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3628 alpha/beta hydrolase fold YP_002422661.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mpo:Mpop_3911 glutathione-dependent formaldehyde-activating GFA YP_002422662.1 PFAM: GAF domain protein; KEGG: mex:Mext_3629 GAF domain-containing protein YP_002422663.1 KEGG: mex:Mext_3630 hypothetical protein YP_002422664.1 KEGG: mpo:Mpop_3914 hypothetical protein YP_002422665.1 KEGG: mex:Mext_3632 hypothetical protein YP_002422666.1 TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3633 molybdate ABC transporter inner membrane subunit YP_002422667.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_3634 glutathione S-transferase domain-containing protein YP_002422668.1 KEGG: mex:Mext_3635 molybdate ABC transporter ATPase subunit; TIGRFAM: molybdate ABC transporter ATPase; PFAM: ABC transporter related; TOBE domain protein; SMART: ATPase AAA YP_002422669.1 KEGG: mex:Mext_3637 hypothetical protein YP_002422670.1 KEGG: mex:Mext_3638 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: pyridoxal phosphate biosynthetic protein PdxA YP_002422671.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin YP_002422672.1 KEGG: mex:Mext_3640 hypothetical protein YP_002422673.1 PFAM: glycosyl transferase family 2; chitin synthase; KEGG: mex:Mext_3641 glycosyl transferase YP_002422674.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3642 alpha/beta hydrolase fold YP_002422675.1 PFAM: sulfate transporter/antisigma-factor antagonist STAS; xanthine/uracil/vitamin C permease; sulfate transporter; KEGG: mex:Mext_3643 sulfate transporter YP_002422676.1 PFAM: LrgB family protein; KEGG: mex:Mext_3644 LrgB family protein YP_002422677.1 PFAM: LrgA family protein; KEGG: mex:Mext_3645 LrgA family protein YP_002422678.1 PFAM: protein of unknown function DUF1332; KEGG: mex:Mext_3646 hypothetical protein YP_002422679.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_3647 methyltransferase type 11 YP_002422680.1 PFAM: OstA family protein; organic solvent tolerance protein; KEGG: mex:Mext_3648 organic solvent tolerance protein YP_002422681.1 PFAM: permease YjgP/YjgQ family protein; KEGG: mex:Mext_3649 permease YjgP/YjgQ family protein YP_002422682.1 PFAM: permease YjgP/YjgQ family protein; KEGG: mex:Mext_3650 permease YjgP/YjgQ family protein YP_002422683.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: mex:Mext_3651 leucyl aminopeptidase YP_002422684.1 KEGG: mex:Mext_3652 hypothetical protein YP_002422685.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_3653 AMP-dependent synthetase and ligase YP_002422686.1 PFAM: MscS Mechanosensitive ion channel; KEGG: mex:Mext_3654 MscS mechanosensitive ion channel YP_002422687.1 PFAM: DSBA oxidoreductase; KEGG: mex:Mext_3655 DsbA oxidoreductase YP_002422688.1 KEGG: mex:Mext_3656 metal dependent phophohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002422689.1 PFAM: phosphate-selective porin O and P; KEGG: mex:Mext_3657 phosphate-selective porin O and P YP_002422690.1 PFAM: aminotransferase class I and II; KEGG: mex:Mext_3658 aminotransferase class I and II YP_002422691.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: ribonuclease E and G; KEGG: mex:Mext_3659 ribonuclease YP_002422692.1 KEGG: mex:Mext_3660 hypothetical protein YP_002422693.1 PFAM: cell wall hydrolase/autolysin; KEGG: mex:Mext_3661 N-acetylmuramoyl-L-alanine amidase YP_002422694.1 KEGG: mex:Mext_3662 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_002422695.1 PFAM: monooxygenase; KEGG: mex:Mext_3663 alkanesulfonate monooxygenase YP_002422696.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3664 acyl-CoA dehydrogenase type 2 YP_002422697.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_3665 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_002422698.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mex:Mext_3666 molybdopterin dehydrogenase FAD-binding YP_002422699.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_3667 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_002422700.1 KEGG: mex:Mext_3668 hypothetical protein YP_002422701.1 PFAM: xanthine/uracil/vitamin C permease; KEGG: mex:Mext_3669 xanthine/uracil/vitamin C permease YP_002422702.1 KEGG: mpo:Mpop_3957 hypothetical protein YP_002422703.1 PFAM: monooxygenase; KEGG: mex:Mext_3670 luciferase family protein YP_002422704.1 KEGG: mex:Mext_3671 hypothetical protein YP_002422705.1 KEGG: mpo:Mpop_0104 hypothetical protein YP_002422706.1 KEGG: mex:Mext_3673 DHH superfamily phosphohydrolase YP_002422707.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan YP_002422708.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space YP_002422709.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: atu:Atu5094 ISL3 family transposase YP_002422710.1 KEGG: csc:Csac_0779 GDSL family lipase YP_002422711.1 PFAM: oxidoreductase domain protein; KEGG: scl:sce7613 oxidoreductase YP_002422712.1 PFAM: CBS domain containing protein; nucleotidyl transferase; KEGG: sru:SRU_0607 mannose-1-phosphate guanyltransferase YP_002422713.1 PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: mag:amb0080 sialic acid synthase YP_002422714.1 KEGG: ajs:Ajs_0546 hypothetical protein YP_002422715.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: cvi:CV_4033 N-acetylglucosamine-6-phosphate 2-epimerase/N-acetylglucosamine-6-phosphatase YP_002422716.1 KEGG: mca:MCA2548 hypothetical protein YP_002422717.1 PFAM: polysaccharide deacetylase; KEGG: mgm:Mmc1_0148 polysaccharide deacetylase YP_002422718.1 PFAM: polysaccharide biosynthesis protein CapD; KEGG: bfr:BF1430 nucleoside-diphosphate sugar epimerase YP_002422719.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mag:amb0078 pyridoxal phosphate-dependent enzyme YP_002422721.1 PFAM: oxidoreductase domain protein; KEGG: dau:Daud_0025 oxidoreductase domain protein YP_002422722.1 KEGG: gbe:GbCGDNIH1_2152 glycosyltransferase YP_002422723.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: bja:blr5996 posttranslational modification protein YP_002422725.1 PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_A3797 hypothetical protein YP_002422726.1 KEGG: mlo:mll8033 hypothetical protein YP_002422727.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: oan:Oant_4496 transposase IS116/IS110/IS902 family protein YP_002422728.1 PFAM: integrase catalytic region; KEGG: mex:Mext_3531 integrase catalytic region YP_002422729.1 KEGG: mex:Mext_2439 hypothetical protein YP_002422730.1 KEGG: mex:Mext_2440 hypothetical protein YP_002422731.1 KEGG: mem:Memar_0194 hypothetical protein YP_002422732.1 KEGG: fal:FRAAL1676 modular polyketide synthase YP_002422733.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase; KEGG: mex:Mext_2395 glucose-1-phosphate thymidylyltransferase YP_002422734.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3692 dTDP-4-dehydrorhamnose reductase YP_002422735.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3691 dTDP-glucose 4,6-dehydratase YP_002422736.1 KEGG: mex:Mext_3690 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_002422737.1 PFAM: glycosyl transferase family 2; KEGG: bpy:Bphyt_0883 glycosyl transferase family 2 YP_002422738.1 KEGG: mex:Mext_3718 hypothetical protein YP_002422739.1 KEGG: mrd:Mrad2831_4949 hypothetical protein YP_002422740.1 KEGG: mex:Mext_3719 hypothetical protein YP_002422741.1 KEGG: mex:Mext_3720 hypothetical protein YP_002422742.1 KEGG: mrd:Mrad2831_4166 hypothetical protein YP_002422743.1 catalyzes the hydrolysis of allophanate YP_002422745.1 KEGG: mex:Mext_3722 UreA carboxylase; TIGRFAM: urea amidolyase related protein; urea carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; allophanate hydrolase subunit 2; carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; SMART: allophanate hydrolase subunit 1 YP_002422746.1 TIGRFAM: urea carboxylase-associated protein 1; KEGG: mex:Mext_3723 hypothetical protein YP_002422747.1 TIGRFAM: urea carboxylase-associated protein 2; KEGG: mex:Mext_3724 hypothetical protein YP_002422748.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: mex:Mext_3725 protein of unknown function DUF861 cupin_3 YP_002422749.1 TIGRFAM: glutamine synthetaseII; PFAM: glutamine synthetase catalytic region; KEGG: mex:Mext_3726 glutamine synthetase, type III YP_002422750.1 PFAM: creatininase; KEGG: mex:Mext_3727 creatininase YP_002422751.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3728 ABC transporter YP_002422752.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3729 binding-protein-dependent transport systems inner membrane component YP_002422753.1 KEGG: mex:Mext_3730 ABC transporter substrate-binding protein YP_002422754.1 KEGG: mex:Mext_3731 glycine betaine/L-proline ABC transporter ATPase; TIGRFAM: glycine betaine/L-proline ABC transporter ATPase; PFAM: CBS domain containing protein; ABC transporter related; SMART: ATPase AAA YP_002422755.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3732 binding-protein-dependent transport systems inner membrane component YP_002422756.1 PFAM: substrate-binding region of ABC-type glycine betaine transporter; KEGG: mex:Mext_3733 substrate-binding region of ABC-type glycine betaine transporter YP_002422757.1 KEGG: mex:Mext_3734 signal peptide YP_002422758.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: mex:Mext_3735 helix-turn-helix domain-containing protein YP_002422759.1 TIGRFAM: sarcosine oxidase subunit beta family; PFAM: FAD dependent oxidoreductase; KEGG: mex:Mext_3736 sarcosine oxidase subunit beta family protein YP_002422760.1 TIGRFAM: sarcosine oxidase subunit delta family; PFAM: sarcosine oxidase subunit delta heterotetrameric; KEGG: mex:Mext_3737 sarcosine oxidase subunit delta family protein YP_002422761.1 TIGRFAM: sarcosine oxidase subunit alpha family; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel; KEGG: mex:Mext_3738 sarcosine oxidase subunit alpha family protein YP_002422762.1 PFAM: sarcosine oxidase subunit gamma; KEGG: mex:Mext_3739 sarcosine oxidase subunit gamma YP_002422763.1 KEGG: mex:Mext_3740 L-serine dehydratase; TIGRFAM: L-serine dehydratase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_002422764.1 KEGG: mex:Mext_3741 hypothetical protein YP_002422765.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: mex:Mext_3742 YbaK/prolyl-tRNA synthetase associated region YP_002422766.1 PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: mex:Mext_3743 electron transfer flavoprotein beta-subunit YP_002422767.1 PFAM: electron transfer flavoprotein alpha/beta-subunit ; electron transfer flavoprotein subunit alpha; KEGG: mex:Mext_3744 electron transfer flavoprotein subunit alpha YP_002422768.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mex:Mext_3745 hypothetical protein YP_002422769.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_3746 NADH:flavin oxidoreductase/NADH oxidase YP_002422770.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: mex:Mext_3747 oxidoreductase FAD-binding subunit YP_002422771.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mex:Mext_3748 Rieske (2Fe-2S) domain-containing protein YP_002422772.1 TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: mex:Mext_3749 histidinol-phosphate phosphatase YP_002422773.1 PFAM: choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: mex:Mext_3750 choline/ethanolamine kinase YP_002422774.1 PFAM: aminoglycoside phosphotransferase; KEGG: mex:Mext_3751 aminoglycoside phosphotransferase YP_002422775.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_002422776.1 KEGG: mex:Mext_3753 oligopeptide/dipeptide ABC transporter ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA YP_002422777.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3754 binding-protein-dependent transport systems inner membrane component YP_002422778.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3755 binding-protein-dependent transport systems inner membrane component YP_002422779.1 PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_3756 extracellular solute-binding protein YP_002422780.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: mex:Mext_3757 TonB-dependent siderophore receptor YP_002422781.1 PFAM: FecR protein; KEGG: mex:Mext_3758 FecR protein YP_002422782.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_3759 sigma-70 family RNA polymerase sigma factor YP_002422783.1 PFAM: IucA/IucC family protein; KEGG: mex:Mext_3760 IucA/IucC family protein YP_002422784.1 PFAM: AMP-dependent synthetase and ligase; IucA/IucC family protein; KEGG: mex:Mext_3761 IucA/IucC family protein YP_002422785.1 KEGG: mex:Mext_3762 hypothetical protein YP_002422786.1 PFAM: xylose isomerase; KEGG: mex:Mext_3763 xylose isomerase domain-containing protein YP_002422787.1 KEGG: mex:Mext_3764 hypothetical protein YP_002422788.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_3765 GCN5-related N-acetyltransferase YP_002422789.1 KEGG: mex:Mext_3766 hypothetical protein YP_002422790.1 KEGG: mex:Mext_3768 TetR family transcriptional regulator YP_002422791.1 KEGG: mex:Mext_3769 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_002422792.1 PFAM: protein of unknown function DUF1790; KEGG: mex:Mext_3770 hypothetical protein YP_002422793.1 PFAM: protein of unknown function DUF526; KEGG: mex:Mext_3771 hypothetical protein YP_002422794.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_3772 response regulator receiver YP_002422795.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_3773 ATPase domain-containing protein YP_002422796.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_3774 diguanylate cyclase YP_002422797.1 KEGG: mex:Mext_3775 glutathione-S-transferase protein YP_002422798.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mex:Mext_3776 polyhydroxyalkanoate depolymerase, intracellular YP_002422799.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_002422800.1 PFAM: response regulator receiver; KEGG: mex:Mext_3778 response regulator receiver YP_002422801.1 PFAM: glutamine amidotransferase class-II; KEGG: mex:Mext_3779 glutamine amidotransferase class-II YP_002422802.1 PFAM: protein of unknown function DUF81; KEGG: mex:Mext_3780 hypothetical protein YP_002422803.1 PFAM: MaoC domain protein dehydratase; KEGG: mex:Mext_3781 dehydratase YP_002422804.1 PFAM: protein of unknown function YGGT; KEGG: mex:Mext_3782 protein of unknown function YGGT YP_002422805.1 KEGG: mrd:Mrad2831_0261 GTP diphosphokinase YP_002422807.1 KEGG: mex:Mext_0184 hypothetical protein YP_002422808.1 KEGG: mpo:Mpop_2918 hypothetical protein YP_002422809.1 PFAM: Gp37Gp68 family protein; KEGG: bra:BRADO0295 phage protein GP37/Gp68 YP_002422810.1 KEGG: nha:Nham_0599 hypothetical protein YP_002422811.1 KEGG: mpo:Mpop_2387 hypothetical protein YP_002422812.1 PFAM: ribonuclease H; KEGG: pmy:Pmen_2066 ribonuclease H YP_002422813.1 PFAM: transglycosylase; KEGG: ppu:PP_2287 phage internal core protein YP_002422814.1 KEGG: sme:SMc02328 hypothetical unknown protein YP_002422815.1 KEGG: cti:RALTA_B0264 hypothetical protein YP_002422816.1 KEGG: mrd:Mrad2831_2237 hypothetical protein YP_002422817.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: mrd:Mrad2831_6517 resolvase domain-containing protein YP_002422818.1 KEGG: mpo:Mpop_0095 response regulator receiver protein YP_002422819.1 KEGG: mrd:Mrad2831_1399 lipoprotein YP_002422820.1 PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: mex:Mext_3719 hypothetical protein YP_002422821.1 KEGG: mex:Mext_3720 hypothetical protein YP_002422822.1 KEGG: mex:Mext_3718 hypothetical protein YP_002422823.1 PFAM: integrase family protein; KEGG: mpo:Mpop_2395 integrase family protein YP_002422824.1 PFAM: integrase family protein; KEGG: rsp:RSP_2361 integrase/resolvase recombinase protein phage-related integrase YP_002422825.1 KEGG: shl:Shal_4055 hypothetical protein YP_002422826.1 PFAM: protein of unknown function DUF344; KEGG: mex:Mext_1138 hypothetical protein YP_002422827.1 KEGG: mex:Mext_1135 hypothetical protein YP_002422828.1 PFAM: sulfate transporter/antisigma-factor antagonist STAS; xanthine/uracil/vitamin C permease; sulfate transporter; KEGG: mex:Mext_0049 sulfate transporter YP_002422829.1 KEGG: mex:Mext_4255 hypothetical protein YP_002422830.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: met:M446_0110 alcohol dehydrogenase YP_002422831.1 KEGG: met:M446_0111 hypothetical protein YP_002422832.1 KEGG: met:M446_0112 hypothetical protein YP_002422833.1 KEGG: mex:Mext_4257 hypothetical protein YP_002422834.1 KEGG: mex:Mext_4256 GCN5-related N-acetyltransferase YP_002422835.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_0043 helix-turn-helix domain-containing protein YP_002422836.1 KEGG: mex:Mext_0042 hypothetical protein YP_002422837.1 KEGG: mex:Mext_0123 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002422838.1 KEGG: mmr:Mmar10_0158 hypothetical protein YP_002422839.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3791 short-chain dehydrogenase/reductase SDR YP_002422840.1 KEGG: mex:Mext_3792 hypothetical protein YP_002422841.1 PFAM: regulatory protein MarR; KEGG: mex:Mext_3793 regulatory protein MarR YP_002422842.1 KEGG: mex:Mext_3794 DoxX family protein YP_002422843.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mex:Mext_3795 MATE efflux family protein YP_002422844.1 KEGG: mex:Mext_3796 hypothetical protein YP_002422845.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_3797 regulatory protein TetR YP_002422846.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_3798 acriflavin resistance protein YP_002422847.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_3799 RND family efflux transporter MFP subunit YP_002422848.1 KEGG: azc:AZC_1282 hypothetical protein YP_002422849.1 KEGG: mex:Mext_3818 hypothetical protein YP_002422850.1 TIGRFAM: esterase, PHB depolymerase family; PFAM: esterase PHB depolymerase; KEGG: mex:Mext_3819 PHB depolymerase family esterase YP_002422851.1 PFAM: choloylglycine hydrolase; KEGG: mex:Mext_3821 choloylglycine hydrolase YP_002422852.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3822 alpha/beta hydrolase fold YP_002422853.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3823 LysR substrate-binding YP_002422854.1 KEGG: mpo:Mpop_0679 hypothetical protein YP_002422855.1 PFAM: protein of unknown function DUF1275; KEGG: mex:Mext_3824 hypothetical protein YP_002422856.1 PFAM: helix-turn-helix domain protein; GAF domain protein; KEGG: mex:Mext_3825 GAF domain-containing protein YP_002422857.1 KEGG: mex:Mext_3826 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002422858.1 KEGG: mex:Mext_3827 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_002422859.1 inactive form YP_002422860.1 PFAM: chloride channel core; KEGG: mex:Mext_3829 chloride channel core YP_002422861.1 TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mpo:Mpop_5127 transporter hydrophobe/amphiphile efflux-1 (HAE1) family YP_002422862.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_3832 RND family efflux transporter MFP subunit YP_002422864.1 TIGRFAM: cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: mex:Mext_3833 cytochrome d ubiquinol oxidase subunit II YP_002422865.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: mex:Mext_3834 cytochrome bd ubiquinol oxidase subunit I YP_002422866.1 PFAM: protein of unknown function DUF81; KEGG: mex:Mext_3835 hypothetical protein YP_002422867.1 PFAM: regulatory protein ArsR; KEGG: mex:Mext_3836 regulatory protein ArsR YP_002422868.1 PFAM: beta-lactamase; KEGG: mex:Mext_3837 beta-lactamase domain-containing protein YP_002422869.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: mex:Mext_3838 peroxiredoxin YP_002422870.1 PFAM: protein of unknown function DUF442; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_3839 hypothetical protein YP_002422871.1 KEGG: mex:Mext_3840 tetratricopeptide TPR_4 YP_002422872.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3841 alpha/beta hydrolase fold YP_002422873.1 PFAM: periplasmic binding protein; KEGG: mex:Mext_3842 periplasmic binding protein YP_002422874.1 PFAM: transporter permease; ABC-3 protein; KEGG: mex:Mext_3843 transporter permease YP_002422875.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3844 ABC transporter YP_002422876.1 PFAM: oxidoreductase molybdopterin binding; KEGG: mex:Mext_3845 oxidoreductase molybdopterin binding YP_002422877.1 KEGG: mex:Mext_3846 hypothetical protein YP_002422878.1 PFAM: NodS family protein; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_3847 methyltransferase type 12 YP_002422879.1 PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3848 acyl-CoA dehydrogenase type 2 YP_002422880.1 KEGG: mex:Mext_3849 hypothetical protein YP_002422881.1 KEGG: mex:Mext_3850 hypothetical protein YP_002422882.1 KEGG: mex:Mext_3851 hypothetical protein YP_002422883.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_3852 aldo/keto reductase YP_002422884.1 KEGG: mex:Mext_3853 hypothetical protein YP_002422885.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_3854 isochorismatase hydrolase YP_002422886.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_3855 RND family efflux transporter MFP subunit YP_002422887.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_3856 acriflavin resistance protein YP_002422888.1 KEGG: mex:Mext_3857 hypothetical protein YP_002422889.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mex:Mext_3858 NADP oxidoreductase coenzyme F420-dependent YP_002422890.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_3859 aldo/keto reductase YP_002422891.1 TIGRFAM: methyltransferase; PFAM: protein of unknown function methylase KEGG: mex:Mext_3860 methyltransferase YP_002422892.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mex:Mext_3861 RNA-binding S4 domain-containing protein YP_002422893.1 PFAM: protein of unknown function DUF1328; KEGG: mex:Mext_3862 hypothetical protein YP_002422894.1 TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: mex:Mext_3863 arsenical resistance protein ArsH YP_002422895.1 SMART: regulatory protein ArsR; KEGG: mex:Mext_3864 regulatory protein ArsR YP_002422896.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: mex:Mext_3865 arsenate reductase YP_002422897.1 TIGRFAM: arsenic resistance protein; PFAM: Bile acid:sodium symporter; KEGG: mex:Mext_3866 arsenic resistance protein YP_002422898.1 KEGG: mex:Mext_3867 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002422899.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3868 alpha/beta hydrolase fold YP_002422900.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3869 short-chain dehydrogenase/reductase SDR YP_002422901.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mex:Mext_3870 CMP/dCMP deaminase zinc-binding YP_002422902.1 KEGG: mex:Mext_3871 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase YP_002422903.1 KEGG: mex:Mext_3872 hypothetical protein YP_002422904.1 KEGG: mpo:Mpop_4329 hypothetical protein YP_002422905.1 KEGG: mex:Mext_3873 exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII large subunit; PFAM: exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type YP_002422906.1 KEGG: mex:Mext_3874 hypothetical protein YP_002422907.1 KEGG: mex:Mext_3875 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_002422908.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mex:Mext_3876 transcription elongation factor GreA/GreB domain-containing protein YP_002422909.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_3877 quinone oxidoreductase YP_002422910.1 KEGG: mex:Mext_3878 hypothetical protein YP_002422911.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mex:Mext_3879 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002422912.1 PFAM: transcription factor CarD; KEGG: mex:Mext_3880 transcription factor CarD YP_002422913.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma-32 is responsible for the expression of heat shock promoters; there are paralogs in Rhizobium and Sinorhizobium; the proteins in this cluster act as secondary heat shock sigma factors; the Rhizobium sigma-32 factor may also be involved in exopolysaccharide production YP_002422914.1 KEGG: bpm:BURPS1710b_1763 hypothetical protein YP_002422915.1 PFAM: Resolvase domain; Recombinase; KEGG: nwi:Nwi_3138 resolvase YP_002422916.1 PFAM: protein of unknown function DUF971; KEGG: mrd:Mrad2831_6148 hypothetical protein YP_002422917.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; KEGG: mrd:Mrad2831_6149 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_002422918.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mrd:Mrad2831_6150 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002422919.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: mrd:Mrad2831_6151 heat repeat-containing PBS lyase YP_002422920.1 PFAM: cyclic nucleotide-binding; KEGG: mrd:Mrad2831_6152 Crp/FNR family transcriptional regulator YP_002422921.1 KEGG: mrd:Mrad2831_6153 ABC transporter substrate-binding protein YP_002422922.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mrd:Mrad2831_6154 binding-protein-dependent transporters inner membrane component YP_002422923.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mrd:Mrad2831_6155 ABC transporter YP_002422924.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mrd:Mrad2831_6156 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002422925.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: mpo:Mpop_2286 oxidoreductase FAD/NAD(P)-binding domain protein YP_002422926.1 KEGG: mpo:Mpop_0212 hypothetical protein YP_002422927.1 PFAM: CoA-binding protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: rpe:RPE_3202 succinyl-CoA synthetase, alpha subunit YP_002422928.1 PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; KEGG: rpe:RPE_3203 succinate--CoA ligase (ADP-forming) YP_002422929.1 PFAM: aldehyde dehydrogenase; KEGG: rpe:RPE_3204 hypothetical protein YP_002422930.1 PFAM: major facilitator superfamily MFS_1; KEGG: pde:Pden_1011 major facilitator superfamily MFS_1 YP_002422932.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: cti:RALTA_B1541 choline dehydrogenase, a flavoprotein YP_002422933.1 PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: cti:RALTA_B1542 shikimate and dehydroshikimate transporter (); MFS family transporter YP_002422934.1 PFAM: conserved hypothetical protein; KEGG: mpo:Mpop_0213 hypothetical protein YP_002422935.1 catalyzes the formation of acetyl phosphate and sulfite from 2-sulfoacetaldehyde; is active when grown on taurine as a sole carbon source YP_002422936.1 PFAM: regulatory protein IclR; transcriptional regulator IclR; KEGG: reu:Reut_B3754 regulatory protein, IclR YP_002422937.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: met:M446_6098 acetate kinase YP_002422938.1 KEGG: bpt:Bpet3233 hypothetical protein YP_002422939.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: sme:SMc04049 sulfite oxidase protein YP_002422940.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: jan:Jann_1159 hypothetical protein YP_002422941.1 KEGG: tfu:Tfu_1713 hypothetical protein YP_002422942.1 PFAM: conserved hypothetical protein; KEGG: tle:Tlet_1456 uncharacterized protein UPF0065 YP_002422943.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpb:RPB_2839 LysR family transcriptional regulator YP_002422944.1 PFAM: glycosyl transferase group 1; KEGG: mxa:MXAN_1042 glycosyl transferase, group 1 family protein YP_002422945.1 PFAM: polysaccharide biosynthesis protein; KEGG: psa:PST_2496 hypothetical protein YP_002422946.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: tbd:Tbd_0898 hypothetical protein YP_002422947.1 KEGG: GI23660 gene product from transcript GI23660-RA YP_002422948.1 PFAM: glycoside hydrolase family 5; KEGG: azc:AZC_1128 hypothetical protein YP_002422949.1 PFAM: sugar transferase; KEGG: bid:Bind_1034 undecaprenyl-phosphate glucose phosphotransferase YP_002422951.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: bra:BRADO4751 hypothetical protein YP_002422952.1 PFAM: glycosyl transferase group 1; KEGG: oan:Oant_0391 glycosyl transferase group 1 YP_002422953.1 PFAM: glycosyl transferase group 1; protein of unknown function DUF1972; KEGG: met:M446_1455 polysaccharide export protein YP_002422954.1 PFAM: glycosyl transferase group 1; KEGG: mae:Maeo_0395 glycosyl transferase group 1 YP_002422956.1 KEGG: met:M446_1177 integrase family protein YP_002422957.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine YP_002422958.1 PFAM: Hemolysin-type calcium-binding region; KEGG: mex:Mext_3886 hemolysin-type calcium-binding region YP_002422959.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: mex:Mext_3887 PDZ/DHR/GLGF domain-containing protein YP_002422960.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_3888 sigma-70 family RNA polymerase sigma factor YP_002422961.1 KEGG: mex:Mext_3889 uncharacterized protein-like protein YP_002422962.1 KEGG: mex:Mext_3890 hypothetical protein YP_002422963.1 TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter related; KEGG: mex:Mext_3891 excinuclease ABC subunit A YP_002422964.1 KEGG: mex:Mext_3892 methyl-accepting chemotaxis protein YP_002422965.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; nitrate and nitrite sensing domain protein; KEGG: mex:Mext_3893 nitrate and nitrite sensing domain-containing protein YP_002422966.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_3894 RND family efflux transporter MFP subunit YP_002422967.1 TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_3895 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_002422968.1 KEGG: mex:Mext_3896 hypothetical protein YP_002422969.1 KEGG: mex:Mext_3897 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002422970.1 SMART: regulatory protein Crp; KEGG: mex:Mext_3898 regulatory protein Crp YP_002422971.1 PFAM: glycoside hydrolase family 25; KEGG: mex:Mext_3899 glycoside hydrolase family protein YP_002422972.1 PFAM: protein of unknown function DUF1130; KEGG: mex:Mext_3900 hypothetical protein YP_002422973.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: mex:Mext_3901 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_002422974.1 KEGG: mpo:Mpop_4373 hypothetical protein YP_002422975.1 KEGG: mex:Mext_3902 hypothetical protein YP_002422976.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_3903 alcohol dehydrogenase YP_002422977.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_3904 nicotinamidase YP_002422978.1 PFAM: aminotransferase class IV; KEGG: mex:Mext_3905 aminotransferase class IV YP_002422979.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: mex:Mext_3906 glutamine amidotransferase YP_002422980.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: anthranilate synthase component I domain protein; chorismate binding-like; KEGG: mex:Mext_3907 para-aminobenzoate synthase, subunit I YP_002422981.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit YP_002422982.1 KEGG: mex:Mext_3911 hypothetical protein YP_002422983.1 KEGG: mex:Mext_3912 membrane protein-like protein YP_002422984.1 KEGG: mpo:Mpop_4385 hypothetical protein YP_002422985.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: mex:Mext_3913 MazG family protein YP_002422986.1 PFAM: plasmid encoded RepA protein; KEGG: mex:Mext_3914 plasmid encoded RepA protein YP_002422987.1 KEGG: mex:Mext_3915 hypothetical protein YP_002422988.1 PFAM: patatin; KEGG: mex:Mext_3916 patatin YP_002422989.1 PFAM: HpcH/HpaI aldolase; KEGG: mex:Mext_3917 HpcH/HpaI aldolase YP_002422990.1 TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: mex:Mext_3918 hemimethylated DNA binding protein YP_002422991.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_3919 diguanylate cyclase YP_002422992.1 KEGG: mex:Mext_3920 hypothetical protein YP_002422993.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_3921 RND family efflux transporter MFP subunit YP_002422994.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_3922 acriflavin resistance protein YP_002422995.1 KEGG: mex:Mext_3923 metal dependent phophohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region YP_002422996.1 TIGRFAM: agmatinase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: mex:Mext_3924 agmatinase YP_002422997.1 KEGG: mex:Mext_3925 hypothetical protein YP_002422998.1 KEGG: mex:Mext_3926 hypothetical protein YP_002422999.1 KEGG: mex:Mext_3927 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein YP_002423000.1 TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: aminoglycoside phosphotransferase; ABC transporter; KEGG: mex:Mext_3928 2-polyprenylphenol 6-hydroxylase YP_002423001.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_3929 ubiquinone/menaquinone biosynthesis methyltransferase YP_002423002.1 KEGG: mex:Mext_3930 dihydrofolate reductase YP_002423003.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3931 short-chain dehydrogenase/reductase SDR YP_002423004.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway YP_002423005.1 PFAM: colicin V production protein; KEGG: mex:Mext_3933 colicin V production protein YP_002423006.1 PFAM: beta-lactamase; KEGG: mex:Mext_3934 beta-lactamase domain-containing protein YP_002423007.1 PFAM: electron transporter SCO1/SenC; KEGG: mex:Mext_3935 electron transporter SCO1/SenC YP_002423008.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_002423009.1 KEGG: mex:Mext_3937 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_002423010.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase; KEGG: mex:Mext_3938 replicative DNA helicase YP_002423011.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_002423012.1 KEGG: mex:Mext_3940 hypothetical protein YP_002423013.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_002423014.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_002423015.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_3943 gentamicin 3'-N-acetyltransferase YP_002423016.1 PFAM: protein of unknown function DUF1696; KEGG: mex:Mext_3944 hypothetical protein YP_002423017.1 KEGG: mex:Mext_3945 hypothetical protein YP_002423018.1 KEGG: mex:Mext_3946 hypothetical protein YP_002423019.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_3947 cold-shock protein DNA-binding YP_002423020.1 KEGG: mex:Mext_3948 hypothetical protein YP_002423021.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_002423022.1 KEGG: mex:Mext_3950 hypothetical protein YP_002423023.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_3951 TonB-dependent receptor plug YP_002423024.1 KEGG: mex:Mext_3952 hypothetical protein YP_002423025.1 KEGG: mex:Mext_3953 hypothetical protein YP_002423026.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_3954 GCN5-related N-acetyltransferase YP_002423027.1 PFAM: citrate transporter; KEGG: mex:Mext_3955 citrate transporter YP_002423028.1 involved in the transport of C4-dicarboxylates across the membrane YP_002423029.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3957 NAD-dependent epimerase/dehydratase YP_002423030.1 PFAM: fumarate lyase; delta crystallin domain protein; KEGG: mex:Mext_3958 fumarate lyase YP_002423031.1 KEGG: mex:Mext_3959 hypothetical protein YP_002423032.1 PFAM: porin; KEGG: mex:Mext_3960 porin YP_002423033.1 PFAM: extracellular solute-binding protein family 3; KEGG: mex:Mext_3961 extracellular solute-binding protein YP_002423034.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3962 polar amino acid ABC transporter inner membrane subunit YP_002423035.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3963 polar amino acid ABC transporter inner membrane subunit YP_002423036.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3964 ABC transporter YP_002423037.1 PFAM: protein of unknown function DUF606; KEGG: mex:Mext_3965 hypothetical protein YP_002423038.1 PFAM: Arsenical pump membrane protein; citrate transporter; KEGG: mex:Mext_3966 arsenical pump membrane protein YP_002423039.1 KEGG: mex:Mext_3967 hypothetical protein YP_002423040.1 PFAM: propeptide PepSY amd peptidase M4; KEGG: mex:Mext_3968 peptidase YP_002423041.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_3969 NUDIX hydrolase YP_002423042.1 PFAM: band 7 protein; KEGG: mex:Mext_3970 band 7 protein YP_002423043.1 KEGG: mex:Mext_3971 hypothetical protein YP_002423044.1 TIGRFAM: amino acid adenylation protein; non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; transferase; KEGG: mex:Mext_3972 non-ribosomal peptide synthetase YP_002423045.1 KEGG: cch:Cag_1571 hypothetical protein YP_002423046.1 PFAM: virulence-associated protein D (VapD) conserved region; KEGG: cch:Cag_1570 virulence-associated protein D YP_002423047.1 KEGG: mex:Mext_3975 hypothetical protein YP_002423048.1 PFAM: aminotransferase class V; KEGG: mex:Mext_3976 aminotransferase class V YP_002423049.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: mex:Mext_3977 FeS assembly protein SufB YP_002423050.1 KEGG: mex:Mext_3978 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; SMART: ATPase AAA YP_002423051.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: mex:Mext_3979 FeS assembly protein SufD YP_002423052.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mex:Mext_3980 SufS subfamily cysteine desulfurase YP_002423053.1 TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59; KEGG: mex:Mext_3981 FeS assembly SUF system protein YP_002423054.1 PFAM: protein of unknown function DUF820; KEGG: rpe:RPE_4873 protein of unknown function DUF820 YP_002423055.1 TIGRFAM: FeS assembly scaffold SufA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: mex:Mext_3982 FeS assembly scaffold SufA YP_002423056.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_3983 diguanylate cyclase YP_002423057.1 PFAM: helicase; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_3984 DEAD/DEAH box helicase domain-containing protein YP_002423058.1 KEGG: mex:Mext_3985 hypothetical protein YP_002423059.1 PFAM: porin; KEGG: mex:Mext_3986 porin YP_002423060.1 KEGG: mex:Mext_3987 hypothetical protein YP_002423061.1 KEGG: mex:Mext_3988 hypothetical protein YP_002423062.1 KEGG: mex:Mext_3989 hypothetical protein YP_002423063.1 KEGG: mex:Mext_3990 hypothetical protein YP_002423064.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_3991 HAD family hydrolase YP_002423065.1 KEGG: mex:Mext_3992 hypothetical protein YP_002423066.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3993 ABC transporter YP_002423067.1 PFAM: lipolytic protein G-D-S-L family; KEGG: mex:Mext_3994 GDSL family lipase YP_002423068.1 TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; KEGG: mex:Mext_3995 2'-5' RNA ligase YP_002423069.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: mex:Mext_3996 preprotein translocase, SecE subunit YP_002423070.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: mpo:Mpop_4478 NusG antitermination factor YP_002423071.1 binds directly to 23S ribosomal RNA YP_002423072.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_002423073.1 PFAM: cytochrome P450; KEGG: mex:Mext_4000 cytochrome P450 YP_002423074.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_4001 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002423075.1 KEGG: mex:Mext_4002 ferredoxin protein YP_002423076.1 PFAM: acyltransferase 3; KEGG: mex:Mext_4003 acyltransferase 3 YP_002423077.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4004 glycosyl transferase YP_002423078.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mex:Mext_4005 aspartyl-tRNA synthetase YP_002423079.1 KEGG: mex:Mext_4006 biotin synthase; TIGRFAM: biotin synthase; PFAM: radical SAM protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB YP_002423080.1 KEGG: mex:Mext_4007 hypothetical protein YP_002423081.1 PFAM: fumarylacetoacetate hydrolase; KEGG: mex:Mext_4008 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_002423082.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: mex:Mext_4009 membrane protein involved in aromatic hydrocarbon degradation YP_002423083.1 PFAM: prephenate dehydrogenase; KEGG: mex:Mext_4010 prephenate dehydrogenase YP_002423084.1 KEGG: mex:Mext_4011 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002423085.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_4012 radical SAM domain-containing protein YP_002423086.1 PFAM: phosphate-selective porin O and P; KEGG: mex:Mext_4013 phosphate-selective porin O and P YP_002423087.1 KEGG: mpo:Mpop_4496 hypothetical protein YP_002423088.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_002423089.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_002423090.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; subunit beta is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_002423091.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_002423092.1 PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_4019 extracellular solute-binding protein YP_002423093.1 PFAM: endoribonuclease L-PSP; KEGG: mex:Mext_4020 endoribonuclease L-PSP YP_002423094.1 PFAM: transglycosylase; KEGG: mex:Mext_4021 transglycosylase YP_002423095.1 PFAM: NmrA family protein; KEGG: mex:Mext_4022 NmrA family protein YP_002423096.1 PFAM: helix-turn-helix HxlR type; KEGG: mex:Mext_4023 helix-turn-helix HxlR type YP_002423097.1 KEGG: mex:Mext_4024 hypothetical protein YP_002423098.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_4025 glutathione S-transferase domain-containing protein YP_002423099.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_4026 TonB-dependent siderophore receptor YP_002423100.1 KEGG: mex:Mext_4027 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein YP_002423101.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_002423102.1 PFAM: amino acid permease-associated region; KEGG: mex:Mext_4029 amino acid permease-associated region YP_002423103.1 KEGG: mpo:Mpop_4511 hypothetical protein YP_002423104.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_4030 exodeoxyribonuclease III Xth YP_002423105.1 PFAM: BLUF domain protein; KEGG: mex:Mext_4031 BLUF domain-containing protein YP_002423106.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; hypothetical protein; KEGG: mex:Mext_4032 diguanylate cyclase YP_002423107.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: mex:Mext_4033 outer membrane lipoprotein carrier protein LolA YP_002423108.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase AAA; KEGG: mex:Mext_4034 cell divisionFtsK/SpoIIIE YP_002423109.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers YP_002423110.1 LovR from Caulobacter crescentus is a response regulator part of a two-component signaling system that regulates photosensitive bacterial cell-surface and cell-cell attachment YP_002423111.1 KEGG: mex:Mext_4037 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002423112.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4038 major facilitator transporter YP_002423113.1 KEGG: mex:Mext_4039 hypothetical protein YP_002423114.1 KEGG: mex:Mext_4040 hypothetical protein YP_002423115.1 PFAM: NnrUfamily protein; KEGG: mex:Mext_4041 NnrU family protein YP_002423116.1 KEGG: mex:Mext_4042 hypothetical protein YP_002423117.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_002423118.1 PFAM: protein of unknown function DUF81; KEGG: mex:Mext_4044 hypothetical protein YP_002423119.1 PFAM: glutamate--cysteine ligase; KEGG: mex:Mext_4045 glutamate--cysteine ligase YP_002423120.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_002423121.1 KEGG: mex:Mext_4047 hypothetical protein YP_002423122.1 PFAM: protein of unknown function UPF0074; KEGG: mex:Mext_4048 hypothetical protein YP_002423123.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_4049 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002423124.1 PFAM: beta-lactamase; KEGG: mex:Mext_4050 beta-lactamase YP_002423125.1 KEGG: mex:Mext_4051 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002423126.1 KEGG: mex:Mext_4052 glutathione S-transferase-like protein YP_002423127.1 PFAM: protein of unknown function DUF937; KEGG: mex:Mext_4053 hypothetical protein YP_002423128.1 KEGG: mex:Mext_4054 hypothetical protein YP_002423129.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-subunit beta is inserted between the strands, where it probes for the presence of a lesion YP_002423130.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpo:Mpop_4540 LysR family transcriptional regulator YP_002423131.1 PFAM: DoxX family protein; KEGG: mex:Mext_4059 DoxX family protein YP_002423132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_4060 glyoxalase/bleomycin resistance protein/dioxygenase YP_002423133.1 KEGG: mex:Mext_4061 hypothetical protein YP_002423134.1 KEGG: mex:Mext_4062 hypothetical protein YP_002423135.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate YP_002423136.1 PFAM: ankyrin; KEGG: mex:Mext_4065 ankyrin YP_002423137.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: mex:Mext_4066 glycerol kinase YP_002423138.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_4067 hypothetical protein YP_002423139.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4068 chemotaxis sensory transducer YP_002423140.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: mex:Mext_4069 glycerophosphoryl diester phosphodiesterase YP_002423141.1 PFAM: endoribonuclease L-PSP; KEGG: mex:Mext_4070 endoribonuclease L-PSP YP_002423142.1 PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: mex:Mext_4071 ABC transporter YP_002423143.1 KEGG: mex:Mext_4072 secretion protein HlyD family protein YP_002423144.1 KEGG: mpo:Mpop_4554 hypothetical protein YP_002423145.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_4074 helix-turn-helix domain-containing protein YP_002423146.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mex:Mext_4075 acetylornithine and succinylornithine aminotransferase YP_002423147.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: mex:Mext_4076 ornithine carbamoyltransferase YP_002423148.1 KEGG: mex:Mext_1752 hypothetical protein YP_002423149.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: mex:Mext_4077 activator of HSP90 ATPase 1 family protein YP_002423150.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: mex:Mext_4078 glyoxalase/bleomycin resistance protein/dioxygenase YP_002423151.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4079 short-chain dehydrogenase/reductase SDR YP_002423152.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: mex:Mext_4080 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002423153.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; Phytochrome central region domain protein; PAS fold-2 domain protein; PAS fold domain protein; KEGG: mex:Mext_4081 histidine kinase dimerisation/phosphoacceptor YP_002423154.1 PFAM: Haem oxygenase-like; KEGG: mex:Mext_4082 heme oxygenase YP_002423155.1 KEGG: mex:Mext_4083 hypothetical protein YP_002423156.1 KEGG: mex:Mext_4084 hypothetical protein YP_002423157.1 KEGG: mex:Mext_4085 capsule polysaccharide export protein-like protein YP_002423158.1 KEGG: mex:Mext_4086 hypothetical protein YP_002423159.1 KEGG: mex:Mext_4087 hypothetical protein YP_002423160.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: mex:Mext_4088 sigma-54 factor interaction domain-containing protein YP_002423161.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: mex:Mext_4089 flagellar motor switch protein FliN YP_002423162.1 binds to and inhibits the function of flagella specific ATPase FliI YP_002423163.1 One of three proteins involved in switching the direction of the flagellar rotation YP_002423164.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod YP_002423165.1 PFAM: protein of unknown function DUF1153; KEGG: mex:Mext_4093 hypothetical protein YP_002423166.1 PFAM: flagellar hook capping protein; KEGG: mex:Mext_4094 flagellar hook capping protein YP_002423167.1 PFAM: flagellar hook-length control protein; KEGG: mex:Mext_4095 flagellar hook-length control protein YP_002423168.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_002423169.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_4097 phosphatidylethanolamine N-methyltransferase YP_002423170.1 PFAM: hypothetical protein; KEGG: mex:Mext_4098 hypothetical protein YP_002423171.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: mex:Mext_4099 ATPase domain-containing protein YP_002423172.1 PFAM: carbonic anhydrase; KEGG: mex:Mext_4100 carbonic anhydrase YP_002423173.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4101 EmrB/QacA family drug resistance transporter YP_002423174.1 PFAM: secretion protein HlyD; KEGG: mex:Mext_4102 secretion protein HlyD YP_002423175.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_4103 regulatory protein TetR YP_002423176.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_4104 acyl-CoA dehydrogenase domain-containing protein YP_002423177.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: mex:Mext_4105 SUA5/YciO/YrdC/YwlC family protein YP_002423178.1 KEGG: mex:Mext_4106 hypothetical protein YP_002423179.1 KEGG: mex:Mext_4107 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002423180.1 PFAM: KaiB domain protein; KEGG: mex:Mext_4108 KaiB domain-containing protein YP_002423181.1 PFAM: KaiB domain protein; KEGG: mex:Mext_4109 KaiB domain-containing protein YP_002423182.1 acts as a promotor non-specific transcription repressor YP_002423183.1 KEGG: mex:Mext_4111 hypothetical protein YP_002423184.1 PFAM: response regulator receiver; KEGG: mex:Mext_4112 response regulator receiver YP_002423185.1 PFAM: ATP-binding region ATPase domain protein; KEGG: mex:Mext_4113 ATPase domain-containing protein YP_002423186.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_4114 response regulator receiver YP_002423187.1 KEGG: mex:Mext_4115 hypothetical protein YP_002423188.1 SMART: nuclease (SNase domain protein); KEGG: mex:Mext_4116 nuclease YP_002423189.1 KEGG: mex:Mext_4117 hypothetical protein YP_002423190.1 KEGG: mex:Mext_4118 iron uptake protein YP_002423191.1 KEGG: mex:Mext_4119 PepSY-associated TM helix domain-containing protein YP_002423192.1 KEGG: mex:Mext_4120 iron uptake protein YP_002423193.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_4121 TonB-dependent siderophore receptor YP_002423194.1 KEGG: mex:Mext_4122 hypothetical protein YP_002423195.1 KEGG: mpo:Mpop_4605 hypothetical protein YP_002423196.1 KEGG: mex:Mext_4124 hypothetical protein YP_002423197.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: mex:Mext_4125 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_002423198.1 PFAM: Hemolysin-type calcium-binding region; KEGG: mex:Mext_4126 hemolysin-type calcium-binding region YP_002423199.1 PFAM: Hemolysin-type calcium-binding region; KEGG: mex:Mext_4127 hemolysin-type calcium-binding region YP_002423200.1 KEGG: mex:Mext_4128 hypothetical protein YP_002423201.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: mex:Mext_4129 lipopolysaccharide biosynthesis protein YP_002423202.1 KEGG: mex:Mext_4130 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_002423203.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: mex:Mext_4131 NAD-dependent epimerase/dehydratase YP_002423204.1 KEGG: mex:Mext_4132 WecB/TagA/CpsF family glycosyl transferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF YP_002423205.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_4133 NAD-dependent epimerase/dehydratase YP_002423206.1 PFAM: polysaccharide export protein; KEGG: mex:Mext_4134 polysaccharide export protein YP_002423207.1 KEGG: mex:Mext_4135 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase; Cupin 2 conserved barrel domain protein YP_002423208.1 KEGG: mex:Mext_4136 hypothetical protein YP_002423209.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_4137 response regulator receiver YP_002423210.1 KEGG: mex:Mext_4138 hypothetical protein YP_002423211.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein; KEGG: mex:Mext_4139 YVTN beta-propeller repeat-containing protein YP_002423212.1 KEGG: mex:Mext_4140 MxaD protein YP_002423213.1 SMART: von Willebrand factor type A; KEGG: mex:Mext_4141 von Willebrand factor type A YP_002423214.1 KEGG: mex:Mext_4142 hypothetical protein YP_002423215.1 SMART: von Willebrand factor type A; KEGG: mex:Mext_4143 von Willebrand factor type A YP_002423216.1 KEGG: mex:Mext_4144 MxaA protein YP_002423217.1 KEGG: mex:Mext_4145 hypothetical protein YP_002423218.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase AAA; SMART: AAA ATPase; KEGG: mex:Mext_4146 ATPase YP_002423219.1 PFAM: methanol dehydrogenase subunit beta; KEGG: mex:Mext_4147 methanol dehydrogenase subunit beta YP_002423220.1 PFAM: cytochrome C class I; KEGG: mex:Mext_4148 cytochrome c class I YP_002423221.1 PFAM: extracellular solute-binding protein family 3; KEGG: mex:Mext_4149 extracellular solute-binding protein YP_002423222.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: pyrrolo-quinoline quinone; KEGG: mex:Mext_4150 methanol/ethanol family PQQ-dependent dehydrogenase YP_002423223.1 KEGG: mex:Mext_4151 hypothetical protein YP_002423224.1 KEGG: mex:Mext_4152 hypothetical protein YP_002423225.1 KEGG: mex:Mext_4153 hypothetical protein YP_002423226.1 PFAM: beta-lactamase; KEGG: mex:Mext_4154 beta-lactamase domain-containing protein YP_002423227.1 KEGG: mex:Mext_4155 hypothetical protein YP_002423228.1 KEGG: mpo:Mpop_4638 hypothetical protein YP_002423229.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; nucleotidyl transferase; KEGG: mex:Mext_4156 UDP-N-acetylglucosamine pyrophosphorylase YP_002423230.1 TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: mex:Mext_4157 glucosamine--fructose-6-phosphate aminotransferase, isomerizing YP_002423231.1 PFAM: protein of unknown function DUF336; KEGG: mex:Mext_4158 hypothetical protein YP_002423232.1 PFAM: protein of unknown function DUF502; KEGG: mex:Mext_4159 hypothetical protein YP_002423233.1 KEGG: mex:Mext_4160 hypothetical protein YP_002423234.1 catalyzes branch migration in Holliday junction intermediates YP_002423235.1 PFAM: protein of unknown function DUF339; KEGG: mex:Mext_4162 hypothetical protein YP_002423236.1 KEGG: mex:Mext_4163 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase; SMART: DEAD-like helicases YP_002423237.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_4164 cold-shock protein DNA-binding YP_002423238.1 KEGG: mex:Mext_4165 hypothetical protein YP_002423239.1 KEGG: mex:Mext_4166 hypothetical protein YP_002423240.1 KEGG: mpo:Mpop_4680 hypothetical protein YP_002423241.1 KEGG: mex:Mext_4168 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein YP_002423242.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_4169 ATPase domain-containing protein YP_002423243.1 PFAM: response regulator receiver; KEGG: mex:Mext_4170 response regulator receiver YP_002423244.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_4171 AMP-dependent synthetase and ligase YP_002423245.1 KEGG: mpo:Mpop_4685 hypothetical protein YP_002423246.1 PFAM: glycosyl transferase family 39; KEGG: mex:Mext_4173 glycosyl transferase YP_002423247.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4174 glycosyl transferase YP_002423248.1 PFAM: lipid A biosynthesis domain protein; KEGG: mex:Mext_4175 lipid A biosynthesis domain-containing protein YP_002423249.1 KEGG: mex:Mext_4176 hypothetical protein YP_002423250.1 KEGG: mex:Mext_4177 cyclohexanone monooxygenase YP_002423251.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: mex:Mext_4178 alpha/beta hydrolase domain-containing protein YP_002423252.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4179 short-chain dehydrogenase/reductase SDR YP_002423253.1 PFAM: protein of unknown function UPF0061; KEGG: mex:Mext_4180 hypothetical protein YP_002423254.1 PFAM: protein of unknown function DUF433; KEGG: mpo:Mpop_4945 protein of unknown function DUF433 YP_002423255.1 KEGG: rrs:RoseRS_0674 hypothetical protein YP_002423256.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_4181 hypothetical protein YP_002423257.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: mex:Mext_4182 histidine kinase dimerisation/phosphoacceptor YP_002423258.1 PFAM: lipolytic protein G-D-S-L family; KEGG: mex:Mext_4183 GDSL family lipase YP_002423259.1 KEGG: mex:Mext_4184 hypothetical protein YP_002423260.1 KEGG: mex:Mext_4185 beta-lactamase-like protein YP_002423261.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: mex:Mext_4186 TatD family hydrolase YP_002423262.1 TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); KEGG: mex:Mext_4187 methionyl-tRNA synthetase YP_002423263.1 KEGG: mex:Mext_4188 hypothetical protein YP_002423264.1 KEGG: mex:Mext_4189 hypothetical protein YP_002423265.1 KEGG: mex:Mext_4190 DNA-directed DNA polymerase YP_002423266.1 PFAM: thymidylate kinase; KEGG: mex:Mext_4191 dTMP kinase YP_002423267.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_4192 ornithine carbamoyltransferase YP_002423268.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_4193 binding-protein-dependent transport systems inner membrane component YP_002423269.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: mex:Mext_4194 ABC transporter YP_002423270.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_4195 cyclic nucleotide-binding YP_002423271.1 KEGG: mex:Mext_4197 hypothetical protein YP_002423272.1 KEGG: mex:Mext_4198 hypothetical protein YP_002423273.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4199 major facilitator transporter YP_002423274.1 PFAM: aminotransferase class V; KEGG: mex:Mext_4200 aminotransferase class V YP_002423275.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_4201 regulatory protein GntR HTH YP_002423276.1 KEGG: mex:Mext_4202 hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: xylose isomerase YP_002423277.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_4203 short-chain dehydrogenase/reductase SDR YP_002423278.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase; KEGG: mex:Mext_4204 D-lactate dehydrogenase (cytochrome) YP_002423279.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mex:Mext_4205 polyhydroxyalkanoate depolymerase, intracellular YP_002423280.1 PFAM: aldehyde dehydrogenase; KEGG: mex:Mext_4206 aldehyde dehydrogenase YP_002423281.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: rpc:RPC_0674 lipopolysaccharide biosynthesis YP_002423282.1 PFAM: O-antigen polymerase; KEGG: rsh:Rsph17029_3696 O-antigen polymerase YP_002423283.1 PFAM: surface presentation of antigens (SPOA) protein; KEGG: mex:Mext_4210 surface presentation of antigens (SpoA) protein YP_002423284.1 TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: mex:Mext_4211 lipoate-protein ligase B YP_002423285.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4212 glycosyl transferase YP_002423286.1 PFAM: protein of unknown function DUF606; KEGG: mex:Mext_4213 hypothetical protein YP_002423287.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_4214 hypothetical protein YP_002423288.1 PFAM: response regulator receiver; KEGG: mex:Mext_4215 response regulator receiver YP_002423289.1 PFAM: pentapeptide repeat protein; KEGG: mex:Mext_4216 pentapeptide repeat-containing protein YP_002423290.1 KEGG: mex:Mext_4217 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002423291.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_4219 hypothetical protein YP_002423292.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mex:Mext_4220 response regulator receiver YP_002423293.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_4221 GCN5-related N-acetyltransferase YP_002423294.1 PFAM: protein of unknown function DUF983; KEGG: mex:Mext_4222 hypothetical protein YP_002423295.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: mex:Mext_4223 L-lactate transport YP_002423296.1 PFAM: manganese containing catalase; KEGG: mex:Mext_4224 manganese containing catalase YP_002423297.1 PFAM: Squalene/phytoene synthase; KEGG: mex:Mext_4225 squalene/phytoene synthase YP_002423298.1 PFAM: protein of unknown function DUF498; KEGG: mex:Mext_4226 hypothetical protein YP_002423299.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: mex:Mext_4227 protein-export membrane protein SecF YP_002423300.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: mex:Mext_4228 protein-export membrane protein SecD YP_002423301.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: mex:Mext_4229 preprotein translocase, YajC subunit YP_002423302.1 PFAM: protein of unknown function DUF815; KEGG: mex:Mext_4230 hypothetical protein YP_002423303.1 PFAM: peptidase M23; KEGG: mex:Mext_4231 peptidase M23B YP_002423304.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: mex:Mext_4232 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_002423305.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate YP_002423306.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002423307.1 PFAM: regulatory protein MarR; KEGG: mex:Mext_4235 regulatory protein MarR YP_002423308.1 KEGG: mex:Mext_4236 hypothetical protein YP_002423309.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: mex:Mext_4237 enoyl-CoA hydratase/isomerase YP_002423310.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_002423311.1 KEGG: mex:Mext_4239 hypothetical protein YP_002423312.1 PFAM: RDD domain containing protein; KEGG: mex:Mext_4240 RDD domain-containing protein YP_002423313.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate YP_002423314.1 TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: mex:Mext_4242 addiction module killer protein YP_002423315.1 KEGG: mex:Mext_4243 hypothetical protein YP_002423316.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: mex:Mext_4244 hexapaptide repeat-containing transferase YP_002423317.1 PFAM: protein of unknown function zinc metallopeptidase KEGG: mex:Mext_4245 protein of unknown function zinc metallopeptidase YP_002423318.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: uracil-DNA glycosylase superfamily; KEGG: mex:Mext_4246 phage SPO1 DNA polymerase-related protein YP_002423319.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: mex:Mext_4247 electron-transferring-flavoprotein dehydrogenase YP_002423320.1 PFAM: peptidase S58 DmpA; KEGG: mex:Mext_4248 peptidase S58 DmpA YP_002423321.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_4249 transporter DMT superfamily protein YP_002423322.1 KEGG: mex:Mext_4250 hypothetical protein YP_002423323.1 KEGG: mex:Mext_4251 hypothetical protein YP_002423324.1 TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: mex:Mext_4252 cystathionine beta-lyase YP_002423325.1 PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: met:M446_6753 hypothetical protein YP_002423326.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_4258 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_002423327.1 KEGG: mex:Mext_4259 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002423328.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4260 glycosyl transferase YP_002423329.1 PFAM: cupin; KEGG: mex:Mext_4261 cupin 2 domain-containing protein YP_002423330.1 KEGG: predicted protein YP_002423331.1 KEGG: mex:Mext_4262 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; methyltransferase small; methyltransferase type 11; methyltransferase type 12 YP_002423332.1 PFAM: heat shock protein Hsp20; KEGG: mex:Mext_4263 heat shock protein HSP20 YP_002423333.1 KEGG: mex:Mext_4264 hypothetical protein YP_002423334.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: mex:Mext_4265 DNA mismatch repair protein MutL YP_002423335.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_4266 acyl-CoA dehydrogenase domain-containing protein YP_002423336.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_4267 ABC transporter YP_002423337.1 KEGG: mex:Mext_4268 alpha/beta hydrolase fold YP_002423338.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: mex:Mext_4269 deaminase-reductase domain-containing protein YP_002423339.1 PFAM: OsmC family protein; KEGG: mex:Mext_4270 OsmC family protein YP_002423340.1 PFAM: protein of unknown function DUF336; KEGG: mex:Mext_4271 hypothetical protein YP_002423341.1 PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_4272 extracellular solute-binding protein YP_002423342.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_4273 binding-protein-dependent transport systems inner membrane component YP_002423343.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_4274 binding-protein-dependent transport systems inner membrane component YP_002423344.1 KEGG: mex:Mext_4275 hypothetical protein YP_002423345.1 PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_4276 major facilitator transporter YP_002423346.1 KEGG: mex:Mext_4277 hypothetical protein YP_002423347.1 PFAM: protein of unknown function DUF1013; KEGG: mex:Mext_4278 hypothetical protein YP_002423348.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4279 LysR substrate-binding YP_002423349.1 stationary phase protein that binds TrpR repressor YP_002423350.1 KEGG: mex:Mext_4281 thiol:disulfide interchange protein YP_002423351.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: mex:Mext_4282 DNA mismatch repair protein MutS YP_002423352.1 KEGG: mex:Mext_4283 hypothetical protein YP_002423353.1 KEGG: mex:Mext_4284 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase; helicase-associated domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases YP_002423354.1 KEGG: mex:Mext_4285 hypothetical protein YP_002423355.1 KEGG: mex:Mext_4286 hypothetical protein YP_002423356.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_4287 glyoxalase/bleomycin resistance protein/dioxygenase YP_002423357.1 TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase; KEGG: mex:Mext_4288 tyrosine recombinase XerC YP_002423358.1 KEGG: mpo:Mpop_4806 hypothetical protein YP_002423359.1 PFAM: phosphoglycerate mutase; KEGG: mex:Mext_4289 phosphoglycerate mutase YP_002423360.1 PFAM: protein of unknown function DUF344; KEGG: mex:Mext_4290 hypothetical protein YP_002423361.1 KEGG: mrd:Mrad2831_5526 hypothetical protein YP_002423362.1 PFAM: MOSC domain containing protein; KEGG: mex:Mext_4291 MOSC domain-containing protein YP_002423363.1 KEGG: mex:Mext_4292 enoyl-acyl carrier protein reductase YP_002423364.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: mex:Mext_4293 heat shock protein DnaJ domain-containing protein YP_002423365.1 KEGG: mex:Mext_4294 hypothetical protein YP_002423366.1 KEGG: mex:Mext_4295 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_002423367.1 PFAM: response regulator receiver; KEGG: mex:Mext_4296 response regulator receiver YP_002423368.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_4297 short-chain dehydrogenase/reductase SDR YP_002423369.1 KEGG: mex:Mext_4298 hypothetical protein YP_002423370.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_4299 NUDIX hydrolase YP_002423371.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_4300 hypothetical protein YP_002423372.1 KEGG: mex:Mext_4301 hypothetical protein YP_002423373.1 KEGG: mex:Mext_4302 hypothetical protein YP_002423374.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides YP_002423375.1 TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel; KEGG: mex:Mext_4304 folate-binding protein YgfZ YP_002423376.1 PFAM: methyladenine glycosylase; KEGG: mex:Mext_4305 DNA-3-methyladenine glycosylase I YP_002423377.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: mex:Mext_4306 metal-dependent phosphohydrolase YP_002423378.1 KEGG: mex:Mext_4307 hypothetical protein YP_002423379.1 TIGRFAM: exodeoxyribonuclease VII small subunit; PFAM: exonuclease VII small subunit; KEGG: mex:Mext_4308 exodeoxyribonuclease VII small subunit YP_002423380.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_002423381.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: mex:Mext_4310 superoxide dismutase copper/zinc binding YP_002423382.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: mex:Mext_4311 hemolysin A YP_002423383.1 PFAM: (uracil-5)-methyltransferase; KEGG: mex:Mext_4312 (uracil-5)-methyltransferase YP_002423384.1 KEGG: mex:Mext_4313 capsular polysaccharide biosynthesis protein-like protein YP_002423385.1 KEGG: mex:Mext_4314 hypothetical protein YP_002423386.1 PFAM: protein of unknown function DUF159; KEGG: mex:Mext_4315 hypothetical protein YP_002423387.1 PFAM: protein of unknown function DUF482; KEGG: mex:Mext_4316 hypothetical protein YP_002423388.1 KEGG: mex:Mext_4317 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_002423389.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: mex:Mext_4318 methylated-DNA--protein-cysteine methyltransferase YP_002423390.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mex:Mext_4319 cation diffusion facilitator family transporter YP_002423391.1 PFAM: histidine triad (HIT) protein; KEGG: mex:Mext_4320 histidine triad (HIT) protein YP_002423392.1 PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_4321 type IV pilus assembly PilZ YP_002423393.1 KEGG: mex:Mext_4322 hypothetical protein YP_002423394.1 PFAM: glycoside hydrolase 15-related; KEGG: mex:Mext_4323 glycoside hydrolase 15-related YP_002423395.1 KEGG: mex:Mext_4324 hypothetical protein YP_002423396.1 KEGG: mex:Mext_4325 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_002423397.1 PFAM: sugar isomerase (SIS); KEGG: mex:Mext_4326 glutamine--fructose-6-phosphate transaminase (isomerizing) YP_002423398.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway YP_002423399.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_4328 endonuclease/exonuclease/phosphatase YP_002423400.1 PFAM: asparaginase/glutaminase; KEGG: mex:Mext_4329 asparaginase YP_002423401.1 PFAM: phospholipase D/transphosphatidylase; KEGG: mex:Mext_4330 phospholipase D/transphosphatidylase YP_002423402.1 PFAM: hypothetical protein; KEGG: mex:Mext_4331 hypothetical protein YP_002423403.1 KEGG: mex:Mext_4332 hypothetical protein YP_002423404.1 PFAM: Surfeit locus 1 family protein; KEGG: mex:Mext_4333 surfeit locus 1 family protein YP_002423405.1 TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: mex:Mext_4334 cytochrome o ubiquinol oxidase subunit IV YP_002423406.1 TIGRFAM: cytochrome o ubiquinol oxidase subunit III; PFAM: cytochrome C oxidase subunit III; KEGG: mex:Mext_4335 cytochrome o ubiquinol oxidase subunit III YP_002423407.1 KEGG: mex:Mext_4336 cytochrome o ubiquinol oxidase subunit I; TIGRFAM: cytochrome o ubiquinol oxidase subunit I; PFAM: cytochrome c oxidase subunit I YP_002423408.1 TIGRFAM: ubiquinol oxidase subunit II; PFAM: cytochrome C oxidase subunit II; COX aromatic rich domain protein; KEGG: mex:Mext_4337 ubiquinol oxidase subunit II YP_002423409.1 KEGG: mex:Mext_4338 ABC transporter transmembrane protein YP_002423410.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_4339 acriflavin resistance protein YP_002423411.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_4340 RND family efflux transporter MFP subunit YP_002423412.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_4341 RND family efflux transporter MFP subunit YP_002423413.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_4342 regulatory protein TetR YP_002423414.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_4343 response regulator receiver YP_002423415.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mex:Mext_4344 ATPase domain-containing protein YP_002423416.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_4345 regulatory protein LuxR YP_002423417.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_4346 regulatory protein LuxR YP_002423418.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4347 glycosyl transferase YP_002423419.1 KEGG: mex:Mext_4348 hypothetical protein YP_002423420.1 PFAM: integrase family protein; KEGG: mag:amb4434 integrase YP_002423421.1 PFAM: helix-turn-helix domain protein; KEGG: bja:bsr0038 transcriptional regulator YP_002423422.1 PFAM: beta-lactamase; KEGG: dvl:Dvul_0859 beta-lactamase domain-containing protein YP_002423423.1 KEGG: bja:bll0880 hypothetical protein YP_002423425.1 KEGG: sus:acid_0788 hypothetical protein YP_002423428.1 KEGG: shn:Shewana3_2964 hypothetical protein YP_002423429.1 PFAM: protein of unknown function DUF156; KEGG: mpo:Mpop_1883 protein of unknown function DUF156 YP_002423430.1 PFAM: major facilitator superfamily MFS_1; KEGG: mpo:Mpop_1884 major facilitator superfamily MFS_1 YP_002423431.1 KEGG: mpo:Mpop_1885 DNA polymerase III subunits gamma and tau YP_002423432.1 KEGG: mpo:Mpop_1886 efflux transporter RND family, MFP subunit YP_002423433.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mpo:Mpop_1887 heavy metal efflux pump, CzcA family YP_002423434.1 KEGG: mpo:Mpop_1888 hypothetical protein YP_002423435.1 KEGG: nha:Nham_3588 hypothetical protein YP_002423436.1 KEGG: mex:Mext_1125 hypothetical protein YP_002423437.1 SMART: rhodanese; KEGG: mpo:Mpop_1890 rhodanese domain protein YP_002423438.1 TIGRFAM: chromate transporter chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: mex:Mext_1475 chromate transporter YP_002423439.1 KEGG: mpo:Mpop_1892 hypothetical protein YP_002423440.1 KEGG: mpo:Mpop_1893 hypothetical protein YP_002423441.1 PFAM: protein of unknown function LppY and LpqO; KEGG: mpo:Mpop_1894 protein of unknown function LppY and LpqO YP_002423442.1 KEGG: mpo:Mpop_1895 hypothetical protein YP_002423444.1 KEGG: met:M446_1502 hypothetical protein YP_002423446.1 KEGG: rec:RHECIAT_CH0003310 superfamily I DNA and RNA helicase protein YP_002423451.1 PFAM: domain of unknown function DUF1738; KEGG: mex:Mext_3581 hypothetical protein YP_002423453.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_4349 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_002423454.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4350 LysR substrate-binding YP_002423455.1 KEGG: mex:Mext_4351 hypothetical protein YP_002423456.1 PFAM: protein of unknown function DUF81; KEGG: mex:Mext_4352 hypothetical protein YP_002423457.1 KEGG: mex:Mext_4353 hypothetical protein YP_002423458.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_4354 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_002423459.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate YP_002423460.1 PFAM: integrase family protein; KEGG: dsh:Dshi_0988 integrase family protein YP_002423461.1 KEGG: jan:Jann_2864 hypothetical protein YP_002423464.1 KEGG: rsq:Rsph17025_4201 hypothetical protein YP_002423465.1 KEGG: bvi:Bcep1808_6235 hypothetical protein YP_002423466.1 KEGG: similar to DnaJ (Hsp40) homolog, subfamily B YP_002423468.1 KEGG: ckl:CKL_3898 hypothetical protein YP_002423473.1 KEGG: mex:Mext_4519 hypothetical protein YP_002423474.1 PFAM: intradiol ring-cleavage dioxygenase; KEGG: bbt:BBta_7382 intradiol ring-cleavage dioxygenase YP_002423475.1 KEGG: mrd:Mrad2831_4030 hypothetical protein YP_002423476.1 KEGG: met:M446_4499 hypothetical protein YP_002423477.1 PFAM: adenylylsulfate kinase; KEGG: mrd:Mrad2831_1882 adenylyl-sulfate kinase YP_002423478.1 KEGG: mrd:Mrad2831_1350 GDSL family lipase YP_002423479.1 PFAM: porin; KEGG: mpo:Mpop_0836 porin YP_002423480.1 KEGG: mpo:Mpop_0837 hypothetical protein YP_002423482.1 KEGG: mpo:Mpop_0839 hypothetical protein YP_002423483.1 KEGG: mpo:Mpop_0840 hypothetical protein YP_002423484.1 KEGG: acr:Acry_2758 hypothetical protein YP_002423485.1 TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: mex:Mext_2081 outer membrane protein assembly complex, YaeT protein YP_002423486.1 KEGG: mpo:Mpop_0721 peptidase C14 caspase catalytic subunit P20 YP_002423487.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; KEGG: mex:Mext_0113 PAS sensor protein YP_002423488.1 PFAM: BLUF domain protein; KEGG: mex:Mext_0114 BLUF domain-containing protein YP_002423489.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: met:M446_1292 integral membrane sensor hybrid histidine kinase YP_002423490.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: mpo:Mpop_0141 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) YP_002423491.1 PFAM: integrase family protein; KEGG: mex:Mext_0119 integrase family protein YP_002423492.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: met:M446_6605 methyl-accepting chemotaxis sensory transducer YP_002423493.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_0121 major facilitator transporter YP_002423494.1 KEGG: ote:Oter_3027 integral membrane protein YP_002423495.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_0155 helix-turn-helix domain-containing protein YP_002423496.1 KEGG: mex:Mext_0110 hypothetical protein YP_002423497.1 SMART: response regulator receiver; KEGG: mex:Mext_0109 response regulator receiver YP_002423498.1 KEGG: mex:Mext_0108 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002423499.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mrd:Mrad2831_2714 TonB-dependent receptor YP_002423500.1 KEGG: met:M446_0104 hypothetical protein YP_002423501.1 KEGG: met:M446_0104 hypothetical protein YP_002423502.1 PFAM: glycoside hydrolase family 8; KEGG: met:M446_0105 cellulase YP_002423503.1 PFAM: cellulose synthase subunit B; KEGG: met:M446_0106 hypothetical protein YP_002423504.1 KEGG: met:M446_0107 cellulose synthase catalytic subunit (UDP-forming); TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2 YP_002423505.1 KEGG: met:M446_0108 hypothetical protein YP_002423506.1 PFAM: response regulator receiver; KEGG: met:M446_0109 response regulator receiver protein YP_002423507.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: mlo:mll5961 transposase YP_002423508.1 KEGG: mpo:Mpop_3985 hypothetical protein YP_002423509.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mpo:Mpop_1345 MucR family transcriptional regulator YP_002423510.1 KEGG: mex:Mext_0136 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002423511.1 PFAM: transposase IS3/IS911 family protein; KEGG: mex:Mext_3530 transposase IS3/IS911 family protein YP_002423512.1 PFAM: integrase catalytic region; KEGG: mex:Mext_3531 integrase catalytic region YP_002423513.1 PFAM: protein of unknown function DUF1469; KEGG: met:M446_6820 hypothetical protein YP_002423514.1 KEGG: met:M446_0738 hypothetical protein YP_002423515.1 PFAM: UspA domain protein; KEGG: mex:Mext_0489 UspA domain-containing protein YP_002423516.1 PFAM: chemotaxis sensory transducer; KEGG: mpo:Mpop_3344 methyl-accepting chemotaxis sensory transducer YP_002423517.1 KEGG: mrd:Mrad2831_0060 hypothetical protein YP_002423518.1 KEGG: mrd:Mrad2831_2038 hypothetical protein YP_002423519.1 KEGG: mrd:Mrad2831_4949 hypothetical protein YP_002423520.1 KEGG: mpo:Mpop_2346 hypothetical protein YP_002423521.1 KEGG: bpy:Bphyt_4763 hypothetical protein YP_002423524.1 KEGG: mpo:Mpop_0877 hypothetical protein YP_002423525.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: cak:Caul_5148 AraC family transcriptional regulator YP_002423526.1 KEGG: bpt:Bpet3011 tautomerase YP_002423527.1 PFAM: Hemolysin-type calcium-binding region; Animal haem peroxidase; KEGG: rpe:RPE_1007 heme peroxidase YP_002423528.1 KEGG: mpo:Mpop_4256 hypothetical protein YP_002423529.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_3522 helix-turn-helix domain-containing protein YP_002423531.1 PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_4361 ThiJ/PfpI domain-containing protein YP_002423532.1 PFAM: amidase; KEGG: msm:MSMEG_3970 glutamyl-tRNA(Gln) amidotransferase subunit A YP_002423533.1 PFAM: peptidase membrane zinc metallopeptidase KEGG: mex:Mext_4363 peptidase membrane zinc metallopeptidase YP_002423534.1 PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: mex:Mext_4364 thioredoxin-disulfide reductase YP_002423535.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_4365 helix-turn-helix domain-containing protein YP_002423536.1 KEGG: mex:Mext_4366 hypothetical protein YP_002423537.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_4367 amine oxidase YP_002423538.1 PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_4368 ThiJ/PfpI domain-containing protein YP_002423539.1 KEGG: mex:Mext_4369 hypothetical protein YP_002423540.1 KEGG: mex:Mext_4370 ABC-type nitrate/sulfonate/bicarbonate transporters periplasmic components-like protein YP_002423541.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_4371 binding-protein-dependent transport systems inner membrane component YP_002423542.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_4372 ABC transporter YP_002423543.1 KEGG: mex:Mext_4373 hypothetical protein YP_002423544.1 KEGG: mex:Mext_4374 hypothetical protein YP_002423545.1 TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: mex:Mext_4375 peptide chain release factor 3 YP_002423546.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4376 short-chain dehydrogenase/reductase SDR YP_002423547.1 KEGG: mex:Mext_4390 hypothetical protein YP_002423548.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002423549.1 PFAM: RNA-binding S4 domain protein; KEGG: mex:Mext_4393 RNA-binding S4 domain-containing protein YP_002423550.1 PFAM: helicase; KEGG: mex:Mext_4394 helicase domain-containing protein YP_002423551.1 KEGG: mex:Mext_4395 hypothetical protein YP_002423552.1 KEGG: mex:Mext_4396 hypothetical protein YP_002423553.1 PFAM: Heme NO binding domain protein; KEGG: mex:Mext_4397 heme NO binding domain-containing protein YP_002423554.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_4398 diguanylate cyclase YP_002423555.1 PFAM: glucokinase; KEGG: mex:Mext_4399 glucokinase YP_002423556.1 KEGG: mex:Mext_4400 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase YP_002423557.1 PFAM: protein of unknown function DUF427; KEGG: mex:Mext_4401 hypothetical protein YP_002423558.1 PFAM: beta-lactamase; KEGG: mex:Mext_4402 beta-lactamase YP_002423559.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: mex:Mext_4403 choline/carnitine/betaine transporter YP_002423560.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: mex:Mext_4404 NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_002423561.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mex:Mext_4405 NADH dehydrogenase (quinone) YP_002423562.1 TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; 4Fe-4S ferredoxin iron-sulphur binding, conserved site; KEGG: mex:Mext_4406 formate dehydrogenase, alpha subunit YP_002423563.1 KEGG: mex:Mext_4407 hypothetical protein YP_002423564.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4408 LysR substrate-binding YP_002423565.1 KEGG: mex:Mext_4409 hypothetical protein YP_002423566.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: mex:Mext_4410 GTP-binding protein Obg/CgtA YP_002423567.1 KEGG: mex:Mext_4411 hypothetical protein YP_002423568.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_4412 GCN5-related N-acetyltransferase YP_002423569.1 involved in the peptidyltransferase reaction during translation YP_002423570.1 PFAM: ribosomal protein L21; KEGG: mex:Mext_4414 ribosomal protein L21 YP_002423571.1 PFAM: protein of unknown function DUF853 NPT hydrolase KEGG: mex:Mext_4415 protein of unknown function DUF853 NPT hydrolase YP_002423572.1 KEGG: mex:Mext_4416 hypothetical protein YP_002423573.1 KEGG: mex:Mext_4417 hypothetical protein YP_002423574.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4418 major facilitator transporter YP_002423575.1 KEGG: mpo:Mpop_4928 hypothetical protein YP_002423576.1 KEGG: mex:Mext_4419 hypothetical protein YP_002423577.1 PFAM: patatin; KEGG: mex:Mext_4420 patatin YP_002423578.1 KEGG: mex:Mext_4421 hypothetical protein YP_002423579.1 KEGG: mex:Mext_4422 hypothetical protein YP_002423580.1 KEGG: mex:Mext_4423 hypothetical protein YP_002423581.1 PFAM: diacylglycerol kinase; KEGG: mex:Mext_4424 diacylglycerol kinase YP_002423582.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_4425 metallophosphoesterase YP_002423583.1 PFAM: Na+/solute symporter; KEGG: mex:Mext_4426 Na+/solute symporter YP_002423584.1 KEGG: mex:Mext_4427 hypothetical protein YP_002423585.1 KEGG: mex:Mext_4428 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002423586.1 KEGG: mex:Mext_4429 hypothetical protein YP_002423587.1 PFAM: nucleotidyl transferase; KEGG: mex:Mext_4430 nucleotidyl transferase YP_002423588.1 PFAM: aminoglycoside phosphotransferase; protein of unknown function UPF0079; KEGG: mex:Mext_4431 hypothetical protein YP_002423589.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; SMART: PAS domain containing protein; KEGG: mex:Mext_4432 ATPase domain-containing protein YP_002423590.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_002423591.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_4434 AMP-dependent synthetase and ligase YP_002423592.1 PFAM: nitroreductase; KEGG: mex:Mext_4435 nitroreductase YP_002423593.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: mex:Mext_4436 enoyl-CoA hydratase/isomerase YP_002423594.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_4437 endonuclease/exonuclease/phosphatase YP_002423595.1 PFAM: phospholipase D/transphosphatidylase; KEGG: mex:Mext_4438 phospholipase D/transphosphatidylase YP_002423596.1 TIGRFAM: double-strand break repair protein AddB; KEGG: mex:Mext_4439 double-strand break repair protein AddB YP_002423597.1 TIGRFAM: double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; KEGG: mex:Mext_4440 double-strand break repair helicase AddA YP_002423598.1 PFAM: glucose sorbosone dehydrogenase; KEGG: mex:Mext_4441 glucose sorbosone dehydrogenase YP_002423599.1 TIGRFAM: thioredoxin; PFAM: thioredoxin domain; KEGG: mex:Mext_4442 thioredoxin YP_002423600.1 KEGG: mex:Mext_4443 porin YP_002423601.1 TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; KEGG: mex:Mext_4444 FolC bifunctional protein YP_002423602.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit beta; KEGG: mex:Mext_4445 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_002423603.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_002423604.1 PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; KEGG: mex:Mext_4447 NUDIX hydrolase YP_002423605.1 PFAM: histidine triad (HIT) protein; KEGG: mex:Mext_4448 histidine triad (HIT) protein YP_002423606.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mex:Mext_4449 metal-dependent phosphohydrolase YP_002423607.1 PFAM: helicase; DbpA RNA-binding domain protein; DEAD/DEAH box helicase; SMART: DEAD-like helicases; KEGG: mex:Mext_4450 DEAD/DEAH box helicase domain-containing protein YP_002423608.1 KEGG: mex:Mext_4451 hypothetical protein YP_002423609.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mex:Mext_4452 ATPase domain-containing protein YP_002423610.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_4453 response regulator receiver YP_002423611.1 PFAM: TENA/THI-4 domain protein; KEGG: mex:Mext_4454 TenA/THI-4 domain-containing protein YP_002423612.1 PFAM: amino acid permease-associated region; KEGG: mex:Mext_4455 amino acid permease-associated region YP_002423613.1 PFAM: beta-lactamase; KEGG: mex:Mext_4456 beta-lactamase domain-containing protein YP_002423614.1 KEGG: mex:Mext_4457 hypothetical protein YP_002423615.1 KEGG: mex:Mext_4458 ABC-type multidrug transporter ATPase and permeases-like protein YP_002423616.1 KEGG: mex:Mext_4459 hypothetical protein YP_002423617.1 KEGG: mex:Mext_4460 hypothetical protein YP_002423618.1 PFAM: glutamine amidotransferase class-II; KEGG: mex:Mext_4461 glutamine amidotransferase class-II YP_002423619.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_4462 sigma-70 family RNA polymerase sigma factor YP_002423620.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4463 ROSMUCR transcriptional regulator YP_002423621.1 KEGG: mex:Mext_4464 hypothetical protein YP_002423622.1 KEGG: mex:Mext_4465 hypothetical protein YP_002423623.1 PFAM: ferredoxin; KEGG: mex:Mext_4466 ferredoxin YP_002423624.1 PFAM: Hpt domain protein; KEGG: mex:Mext_4467 Hpt domain-containing protein YP_002423625.1 PFAM: Apolipoprotein A1/A4/E; KEGG: mex:Mext_4468 hypothetical protein YP_002423626.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: mex:Mext_4469 helix-turn-helix domain-containing protein YP_002423627.1 KEGG: mex:Mext_4470 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1 YP_002423628.1 PFAM: thiamine monophosphate synthase; KEGG: mex:Mext_4471 thiamine-phosphate diphosphorylase YP_002423629.1 KEGG: mex:Mext_4472 hypothetical protein YP_002423630.1 KEGG: mex:Mext_4473 hypothetical protein YP_002423631.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4474 ROSMUCR transcriptional regulator YP_002423632.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis YP_002423633.1 KEGG: mex:Mext_4476 hypothetical protein YP_002423634.1 TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_4477 molybdenum ABC transporter periplasmic molybdate-binding protein YP_002423635.1 KEGG: mex:Mext_4478 hypothetical protein YP_002423636.1 KEGG: mpo:Mpop_4992 hypothetical protein YP_002423637.1 PFAM: ribosomal L11 methyltransferase; KEGG: mex:Mext_4479 ribosomal L11 methyltransferase YP_002423638.1 PFAM: creatinase; peptidase M24; KEGG: mex:Mext_4480 peptidase M24 YP_002423639.1 PFAM: protein-tyrosine phosphatase, low molecular weight; KEGG: mex:Mext_4481 low molecular weight phosphotyrosine protein phosphatase YP_002423640.1 PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: mex:Mext_4482 aminoglycoside phosphotransferase YP_002423641.1 PFAM: ABC transporter; SbmABacA family protein; ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_4485 ABC transporter YP_002423642.1 KEGG: mex:Mext_4486 hypothetical protein YP_002423643.1 KEGG: mex:Mext_4487 hypothetical protein YP_002423644.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_4488 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_002423645.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_4489 glutathione S-transferase domain-containing protein YP_002423646.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4490 LysR substrate-binding YP_002423647.1 Catalyzes the reduction of sulfite to sulfide, an essential step in the anaerobic sulfate-respiration pathway YP_002423648.1 ferredoxin-dependent assimilatory nitrite reductase YP_002423649.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: mex:Mext_4493 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002423650.1 KEGG: mex:Mext_4494 nitrate ABC transporter ATPase subunits C and D; TIGRFAM: nitrate ABC transporter ATPases C and D; PFAM: ABC transporter; SMART: ATPase AAA YP_002423651.1 TIGRFAM: nitrate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_4495 nitrate ABC transporter inner membrane subunit YP_002423652.1 KEGG: mex:Mext_4496 twin-arginine translocation pathway signal YP_002423653.1 KEGG: mex:Mext_4497 nitrate transporter YP_002423654.1 PFAM: response regulator receiver; ANTAR domain protein; KEGG: mex:Mext_4498 ANTAR domain-containing protein YP_002423655.1 KEGG: mex:Mext_4499 hypothetical protein YP_002423656.1 PFAM: glycoside hydrolase 15-related; KEGG: mex:Mext_4500 glycoside hydrolase 15-related YP_002423657.1 TIGRFAM: transketolase; PFAM: transketolase domain protein; transketolase; KEGG: mex:Mext_4501 transketolase YP_002423658.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; catalyzes isomerization of glucose 6-phosphate and fructose 6-phosphate YP_002423659.1 PFAM: hypothetical protein; KEGG: mex:Mext_4503 hypothetical protein YP_002423660.1 KEGG: mex:Mext_4504 hypothetical protein YP_002423661.1 KEGG: mex:Mext_4505 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAC repeat-containing protein YP_002423662.1 KEGG: mex:Mext_4506 hypothetical protein YP_002423663.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4507 short-chain dehydrogenase/reductase SDR YP_002423664.1 TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_4508 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_002423665.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_4509 RND family efflux transporter MFP subunit YP_002423666.1 PFAM: rhodanese; KEGG: mex:Mext_4510 rhodanese YP_002423667.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_4511 glycosyl transferase group 1 YP_002423668.1 KEGG: mex:Mext_4512 hypothetical protein YP_002423669.1 PFAM: autoinducer synthesis protein; KEGG: mex:Mext_4513 autoinducer synthesis protein YP_002423670.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: mex:Mext_4514 autoinducer-binding domain-containing protein YP_002423671.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4518 LysR substrate-binding YP_002423672.1 KEGG: mex:Mext_4519 hypothetical protein YP_002423673.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_4520 acriflavin resistance protein YP_002423674.1 KEGG: mex:Mext_4521 hypothetical protein YP_002423675.1 KEGG: mex:Mext_4522 hypothetical protein YP_002423676.1 KEGG: mex:Mext_4523 hypothetical protein YP_002423677.1 PFAM: pyrrolo-quinoline quinone; KEGG: mex:Mext_4524 pyrrolo-quinoline quinone YP_002423678.1 KEGG: mex:Mext_4525 hypothetical protein YP_002423679.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: mex:Mext_4526 histidine kinase dimerisation/phosphoacceptor YP_002423680.1 KEGG: mex:Mext_4527 hypothetical protein YP_002423681.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_4528 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_002423682.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_4529 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_002423683.1 KEGG: mex:Mext_4530 hypothetical protein YP_002423684.1 KEGG: mex:Mext_4531 hypothetical protein YP_002423685.1 KEGG: mex:Mext_4532 hypothetical protein YP_002423686.1 KEGG: mex:Mext_4533 phosphoenolpyruvate carboxylase YP_002423687.1 KEGG: mex:Mext_4534 hypothetical protein YP_002423688.1 KEGG: mex:Mext_4535 hypothetical protein YP_002423689.1 PFAM: saccharopine dehydrogenase; KEGG: mex:Mext_4536 saccharopine dehydrogenase YP_002423690.1 PFAM: protein of unknown function DUF985; KEGG: mex:Mext_4537 hypothetical protein YP_002423691.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: mex:Mext_4538 oxidoreductase domain-containing protein YP_002423692.1 PFAM: protein of unknown function DUF606; KEGG: mex:Mext_4539 hypothetical protein YP_002423693.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4540 LysR substrate-binding YP_002423694.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_4541 alcohol dehydrogenase YP_002423695.1 KEGG: mex:Mext_4542 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002423696.1 PFAM: SH3 type 3 domain protein; KEGG: mex:Mext_4543 SH3 type 3 domain-containing protein YP_002423697.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4544 short-chain dehydrogenase/reductase SDR YP_002423698.1 FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP. YP_002423699.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP YP_002423700.1 PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: mex:Mext_4547 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_002423701.1 Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides YP_002423702.1 KEGG: mex:Mext_4549 hypothetical protein YP_002423703.1 KEGG: mex:Mext_4550 GGDEF family protein YP_002423704.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_4551 hypothetical protein YP_002423705.1 KEGG: mex:Mext_4552 hypothetical protein YP_002423706.1 KEGG: mex:Mext_4553 hypothetical protein YP_002423707.1 PFAM: cupin; KEGG: mex:Mext_4554 cupin 2 domain-containing protein YP_002423708.1 KEGG: mex:Mext_4555 hypothetical protein YP_002423709.1 PFAM: heat shock protein Hsp20; KEGG: mex:Mext_4556 heat shock protein HSP20 YP_002423710.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_4557 alpha/beta hydrolase fold YP_002423711.1 PFAM: Hemolysin-type calcium-binding region; KEGG: mex:Mext_4558 hemolysin-type calcium-binding region YP_002423712.1 TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: mex:Mext_4559 histidinol-phosphate phosphatase YP_002423713.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_4560 hypothetical protein YP_002423714.1 PFAM: LamB/YcsF family protein; KEGG: mex:Mext_4561 LamB/YcsF family protein YP_002423715.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate YP_002423716.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_4563 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_002423717.1 KEGG: mex:Mext_4564 hypothetical protein YP_002423718.1 PFAM: Mrp protein; KEGG: mex:Mext_4565 MRP protein-like protein YP_002423719.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: mex:Mext_4566 molybdopterin-guanine dinucleotide biosynthesis protein A YP_002423720.1 TIGRFAM: DNA gyrase subunit alpha; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: mex:Mext_4567 DNA gyrase subunit alpha YP_002423721.1 KEGG: mex:Mext_4568 porin YP_002423722.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_002423723.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mex:Mext_4570 peptidyl-prolyl cis-trans isomerase cyclophilin type YP_002423724.1 KEGG: mex:Mext_4571 hypothetical protein YP_002423725.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mex:Mext_4572 peptidyl-prolyl cis-trans isomerase cyclophilin type YP_002423726.1 PFAM: response regulator receiver; KEGG: mex:Mext_4573 response regulator receiver YP_002423727.1 KEGG: mex:Mext_4574 hypothetical protein YP_002423728.1 KEGG: mex:Mext_4575 hypothetical protein YP_002423729.1 KEGG: mex:Mext_4576 DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III subunit alpha; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_002423730.1 KEGG: mex:Mext_4577 hypothetical protein YP_002423731.1 PFAM: patatin; KEGG: mex:Mext_4578 patatin YP_002423732.1 PFAM: ion transporter; ion transport 2 domain protein; KEGG: mex:Mext_4579 ion transport 2 domain-containing protein YP_002423734.1 KEGG: mex:Mext_4580 hypothetical protein YP_002423735.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mex:Mext_4581 respiratory-chain NADH dehydrogenase domain-containing protein YP_002423736.1 TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mex:Mext_4582 formate dehydrogenase, subunit alpha YP_002423737.1 PFAM: polysaccharide biosynthesis protein; KEGG: mex:Mext_4583 polysaccharide biosynthesis protein YP_002423738.1 KEGG: mex:Mext_4584 hypothetical protein YP_002423739.1 PFAM: polysaccharide deacetylase; KEGG: mex:Mext_4585 polysaccharide deacetylase YP_002423740.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_4586 glycosyl transferase group 1 YP_002423741.1 KEGG: mex:Mext_4587 hypothetical protein YP_002423742.1 KEGG: mex:Mext_4588 hypothetical protein YP_002423743.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: mex:Mext_4589 lipopolysaccharide biosynthesis protein YP_002423744.1 KEGG: mex:Mext_4590 hypothetical protein YP_002423745.1 KEGG: mex:Mext_4591 hypothetical protein YP_002423746.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4592 short-chain dehydrogenase/reductase SDR YP_002423747.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_4593 AMP-dependent synthetase and ligase YP_002423748.1 KEGG: mex:Mext_4594 acyl carrier protein YP_002423749.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: mex:Mext_4595 alpha/beta hydrolase domain-containing protein YP_002423750.1 KEGG: mex:Mext_4596 hypothetical protein YP_002423751.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_4597 acyl-CoA dehydrogenase domain-containing protein YP_002423752.1 KEGG: mex:Mext_4598 hypothetical protein YP_002423753.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: mex:Mext_4599 flavin reductase domain-containing protein YP_002423754.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: mex:Mext_4600 acetolactate synthase 2 catalytic subunit YP_002423755.1 KEGG: mex:Mext_4601 hypothetical protein YP_002423756.1 PFAM: aminotransferase class IV; KEGG: mex:Mext_4602 aminotransferase YP_002423757.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: mex:Mext_4603 protein of unknown function DUF861 cupin_3 YP_002423758.1 KEGG: mex:Mext_4604 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_002423759.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis YP_002423760.1 activates fatty acids by binding to coenzyme A; may be involved in acyclic terpene utilization YP_002423761.1 KEGG: mex:Mext_4607 hypothetical protein YP_002423762.1 KEGG: mex:Mext_4608 hypothetical protein YP_002423763.1 KEGG: mex:Mext_4609 hypothetical protein YP_002423764.1 KEGG: acr:Acry_1166 triple helix repeat-containing collagen YP_002423765.1 KEGG: acr:Acry_0615 glycosyl transferase, group 1 YP_002423766.1 PFAM: glycosyl transferase family 2; KEGG: met:M446_3495 glycosyl transferase YP_002423767.1 PFAM: radical SAM protein; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_4610 radical SAM domain-containing protein YP_002423768.1 TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: mex:Mext_4611 monovalent cation/proton antiporter, MnhG/PhaG subunit YP_002423769.1 PFAM: multiple resistance and pH regulation protein F; KEGG: mex:Mext_4612 multiple resistance and pH regulation protein F YP_002423770.1 PFAM: cation antiporter; KEGG: mex:Mext_4613 cation antiporter YP_002423771.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone YP_002423772.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_002423773.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+ YP_002423774.1 KEGG: mex:Mext_4617 hypothetical protein YP_002423775.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: mex:Mext_4618 nucleotide sugar dehydrogenase YP_002423776.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_4619 NAD-dependent epimerase/dehydratase YP_002423777.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: mex:Mext_4620 NAD-dependent epimerase/dehydratase YP_002423778.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: mex:Mext_4621 WecB/TagA/CpsF family glycosyl transferase YP_002423779.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_4622 glycosyl transferase group 1 YP_002423780.1 KEGG: mex:Mext_4623 hypothetical protein YP_002423781.1 PFAM: condensation domain protein; phosphopantetheine-binding; KEGG: mex:Mext_4624 aspartate racemase YP_002423782.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: mex:Mext_4625 amino acid adenylation domain-containing protein YP_002423783.1 KEGG: mex:Mext_4626 hypothetical protein YP_002423784.1 PFAM: phosphoglycerate mutase; KEGG: mex:Mext_4627 phosphoglycerate mutase YP_002423785.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_4628 aldo/keto reductase YP_002423786.1 PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: mex:Mext_4631 ATPase central domain-containing protein YP_002423787.1 KEGG: mex:Mext_4632 hypothetical protein YP_002423788.1 KEGG: mex:Mext_4633 hypothetical protein YP_002423789.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mex:Mext_4634 sodium/hydrogen exchanger YP_002423790.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation YP_002423791.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_002423792.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mex:Mext_4637 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase YP_002423793.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mex:Mext_4638 UDP-N-acetylmuramyl-tripeptide synthetase YP_002423794.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: mex:Mext_4639 peptidoglycan glycosyltransferase YP_002423795.1 KEGG: mex:Mext_4640 hypothetical protein YP_002423796.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: mex:Mext_4641 S-adenosyl-methyltransferase MraW YP_002423797.1 KEGG: mex:Mext_4642 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: NAD-dependent DNA ligase YP_002423798.1 KEGG: mex:Mext_4643 hypothetical protein YP_002423799.1 PFAM: protein of unknown function DUF820; KEGG: mex:Mext_4644 hypothetical protein YP_002423800.1 PFAM: PfkB domain protein; KEGG: mex:Mext_4645 ribokinase-like domain-containing protein YP_002423801.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: mex:Mext_4646 peptidylprolyl isomerase FKBP-type YP_002423802.1 KEGG: mex:Mext_4647 hypothetical protein YP_002423803.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mex:Mext_4648 L-carnitine dehydratase/bile acid-inducible protein F YP_002423804.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_002423805.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_4650 regulatory protein GntR HTH YP_002423806.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mex:Mext_4651 aromatic amino acid beta-eliminating lyase/threonine aldolase YP_002423807.1 KEGG: mex:Mext_4652 hypothetical protein YP_002423808.1 PFAM: glutamate--cysteine ligase; KEGG: mex:Mext_4653 glutamate--cysteine ligase YP_002423809.1 KEGG: mex:Mext_4654 hypothetical protein YP_002423810.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: mex:Mext_4655 peptidase S10 serine carboxypeptidase YP_002423811.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: mex:Mext_4656 DNA polymerase III chi subunit HolC YP_002423812.1 KEGG: mex:Mext_4657 hypothetical protein YP_002423813.1 PFAM: glutathionylspermidine synthase; KEGG: mex:Mext_4658 glutathionylspermidine synthase YP_002423814.1 PFAM: protein of unknown function DUF1190; KEGG: mex:Mext_4659 integral membrane protein-like protein YP_002423815.1 PFAM: protein of unknown function DUF350; KEGG: mex:Mext_4660 hypothetical protein YP_002423816.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_002423817.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: mex:Mext_4662 preprotein translocase, SecG subunit YP_002423818.1 KEGG: mex:Mext_4663 hypothetical protein YP_002423819.1 KEGG: mex:Mext_4664 hypothetical protein YP_002423820.1 KEGG: mex:Mext_4665 hypothetical protein YP_002423821.1 PFAM: triosephosphate isomerase; KEGG: mex:Mext_4666 triose-phosphate isomerase YP_002423822.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mex:Mext_4667 PpiC-type peptidyl-prolyl cis-trans isomerase YP_002423823.1 KEGG: mex:Mext_4668 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: anthranilate synthase component I domain protein; chorismate binding-like YP_002423824.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4669 chemotaxis sensory transducer YP_002423825.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: mex:Mext_4670 glutamine amidotransferase YP_002423826.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_002423827.1 PFAM: indole-3-glycerol phosphate synthase; KEGG: mex:Mext_4672 indole-3-glycerol-phosphate synthase YP_002423828.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: mex:Mext_4673 molybdenum cofactor biosynthesis protein C YP_002423829.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_4674 molybdenum cofactor synthesis domain-containing protein YP_002423830.1 KEGG: mpo:Mpop_5215 RelE-like cytotoxic translational repressor of toxin-antitoxin stability system YP_002423831.1 SMART: helix-turn-helix domain protein; KEGG: mpo:Mpop_5216 XRE family transcriptional regulator YP_002423832.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP YP_002423833.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis YP_002423834.1 PFAM: protein of unknown function DUF1009; KEGG: mex:Mext_4677 hypothetical protein YP_002423835.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM YP_002423836.1 PFAM: protein of unknown function DUF188; KEGG: mex:Mext_4679 hypothetical protein YP_002423837.1 KEGG: mex:Mext_4680 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: citrate synthase YP_002423838.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: mex:Mext_4681 glutamyl-tRNA synthetase YP_002423839.1 PFAM: ComEC/Rec2-related protein; KEGG: mex:Mext_4682 ComEC/Rec2-related protein YP_002423840.1 Represses a number of genes involved in the response to DNA damage YP_002423841.1 PFAM: protein of unknown function DUF1236; KEGG: mex:Mext_4684 hypothetical protein YP_002423842.1 PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_4685 general substrate transporter YP_002423843.1 PFAM: protein of unknown function DUF849; KEGG: mex:Mext_4686 hypothetical protein YP_002423844.1 KEGG: mex:Mext_4687 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_002423845.1 KEGG: mex:Mext_4688 hypothetical protein YP_002423846.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_4689 aldo/keto reductase YP_002423847.1 KEGG: mex:Mext_4690 hypothetical protein YP_002423848.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4691 chemotaxis sensory transducer YP_002423849.1 KEGG: mex:Mext_4692 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_002423850.1 KEGG: mex:Mext_4693 hypothetical protein YP_002423851.1 TIGRFAM: valyl-tRNA synthetase; KEGG: mex:Mext_4694 valyl-tRNA synthetase YP_002423852.1 KEGG: mex:Mext_4695 hypothetical protein YP_002423853.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: mex:Mext_4696 TolC family type I secretion outer membrane protein YP_002423854.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: mex:Mext_4697 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_002423855.1 KEGG: mex:Mext_4699 hypothetical protein YP_002423856.1 KEGG: mex:Mext_4701 hypothetical protein YP_002423857.1 KEGG: mex:Mext_3583 hypothetical protein YP_002423858.1 KEGG: mex:Mext_4702 hypothetical protein YP_002423859.1 KEGG: mex:Mext_4703 hypothetical protein YP_002423860.1 KEGG: mex:Mext_4704 hypothetical protein YP_002423861.1 KEGG: mex:Mext_4705 hypothetical protein YP_002423862.1 KEGG: mex:Mext_4706 hypothetical protein YP_002423863.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: hydroxyethylthiazole kinase; protein of unknown function UPF0031; KEGG: mex:Mext_4707 carbohydrate kinase, YjeF related protein YP_002423864.1 KEGG: mex:Mext_4708 hypothetical protein YP_002423865.1 KEGG: mex:Mext_4709 hypothetical protein YP_002423866.1 KEGG: mex:Mext_4710 hypothetical protein YP_002423867.1 KEGG: mpo:Mpop_5249 hypothetical protein YP_002423868.1 KEGG: mex:Mext_4711 hypothetical protein YP_002423869.1 KEGG: mex:Mext_4712 hypothetical protein YP_002423870.1 TIGRFAM: phosphate ABC transporter periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_4713 phosphate ABC transporter periplasmic phosphate-binding protein YP_002423871.1 TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_4714 phosphate ABC transporter inner membrane subunit PstC YP_002423872.1 TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mpo:Mpop_5254 phosphate ABC transporter inner membrane subunit PstA YP_002423873.1 KEGG: mex:Mext_4716 phosphate ABC transporter ATPase subunit; TIGRFAM: phosphate ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_002423874.1 TIGRFAM: phosphate transporter regulatory protein PhoU; PFAM: PhoU family protein; KEGG: mex:Mext_4717 phosphate transporter regulatory protein PhoU YP_002423875.1 TIGRFAM: phosphate regulon transcriptional regulator PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_4718 phosphate regulon transcriptional regulator PhoB YP_002423876.1 PFAM: GcrA cell cycle regulator; KEGG: mex:Mext_4719 GcrA cell cycle regulator YP_002423877.1 PFAM: Domain of unknown function DUF1849; KEGG: mex:Mext_4720 hypothetical protein YP_002423878.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_002423879.1 KEGG: mex:Mext_4722 precorrin-6x reductase; TIGRFAM: precorrin-6x reductase; PFAM: precorrin-6x reductase CbiJ/CobK YP_002423880.1 TIGRFAM: cobyric acid synthase CobQ; PFAM: cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: mex:Mext_4723 cobyric acid synthase CobQ YP_002423881.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: mex:Mext_4724 cobalamin biosynthesis protein CobD YP_002423882.1 TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: mex:Mext_4725 L-threonine-O-3-phosphate decarboxylase YP_002423883.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4726 major facilitator transporter YP_002423884.1 KEGG: mex:Mext_4727 hypothetical protein YP_002423885.1 PFAM: malonyl-CoA decarboxylase; KEGG: mex:Mext_4728 malonyl-CoA decarboxylase YP_002423886.1 PFAM: CsbD family protein; KEGG: mex:Mext_4729 CsbD family protein YP_002423887.1 TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_4730 3-hydroxybutyrate dehydrogenase YP_002423888.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein YP_002423889.1 PFAM: protein of unkown function DUF1796 papain-like cysteine peptidase; KEGG: mex:Mext_4732 hypothetical protein YP_002423890.1 KEGG: mex:Mext_4733 hypothetical protein YP_002423891.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_002423892.1 PFAM: DNA polymerase beta domain protein region; KEGG: mpo:Mpop_5274 hypothetical protein YP_002423893.1 TIGRFAM: lytic murein transglycosylase; PFAM: peptidoglycan-binding protein; KEGG: mex:Mext_4736 lytic murein transglycosylase YP_002423894.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_002423895.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: mex:Mext_4738 2-nitropropane dioxygenase NPD YP_002423896.1 KEGG: mex:Mext_4739 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_002423897.1 KEGG: mex:Mext_4740 phosphatidylserine decarboxylase related protein; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related YP_002423898.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: ATPase AAA; KEGG: mex:Mext_4741 ABC transporter related YP_002423899.1 PFAM: peptidoglycan-binding LysM; KEGG: mex:Mext_4742 peptidoglycan-binding LysM YP_002423900.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_4743 hypothetical protein YP_002423901.1 KEGG: mex:Mext_4744 hypothetical protein YP_002423902.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_002423903.1 KEGG: mex:Mext_4746 hypothetical protein YP_002423904.1 PFAM: CreA family protein; KEGG: mex:Mext_4747 CreA family protein YP_002423905.1 KEGG: mex:Mext_4748 hypothetical protein YP_002423906.1 PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_4749 OmpA/MotB domain-containing protein YP_002423907.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4750 major facilitator transporter YP_002423908.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: mex:Mext_4751 3-demethylubiquinone-9 3-methyltransferase YP_002423909.1 PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_4752 methyltransferase type 11 YP_002423910.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_002423911.1 PFAM: secretion protein HlyD; KEGG: mex:Mext_4754 secretion protein HlyD YP_002423912.1 PFAM: protein of unknown function DUF1656; KEGG: mex:Mext_4755 hypothetical protein YP_002423913.1 PFAM: fusaric acid resistance protein conserved region; KEGG: mex:Mext_4756 fusaric acid resistance protein region YP_002423914.1 KEGG: mex:Mext_4757 hypothetical protein YP_002423915.1 KEGG: mex:Mext_4758 hypothetical protein YP_002423916.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_4759 glutathione S-transferase domain-containing protein YP_002423917.1 TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; hypothetical protein; KEGG: mex:Mext_4760 beta-propeller repeat-containing to-pal system protein TolB YP_002423918.1 TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA; KEGG: mex:Mext_4761 protein TolA YP_002423919.1 PFAM: biopolymertransporter ExbD/TolR; KEGG: mex:Mext_4762 biopolymer transporter ExbD/TolR YP_002423920.1 TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: mex:Mext_4763 protein TolQ YP_002423921.1 PFAM: chemotaxis sensory transducer; KEGG: mex:Mext_4764 chemotaxis sensory transducer YP_002423922.1 TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: mex:Mext_4765 tol-pal system-associated acyl-CoA thioesterase YP_002423923.1 KEGG: mex:Mext_4766 hypothetical protein YP_002423924.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_4767 metallophosphoesterase YP_002423925.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_002423926.1 PFAM: peptidoglycan-binding protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_4769 peptidoglycan binding domain-containing protein YP_002423927.1 PFAM: ferritin; KEGG: mex:Mext_4770 ferritin Dps family protein YP_002423928.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: mex:Mext_4771 GCN5-related N-acetyltransferase YP_002423929.1 PFAM: class II aldolase/adducin family protein; KEGG: mex:Mext_4772 L-fuculose-phosphate aldolase YP_002423930.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4773 ROSMUCR transcriptional regulator YP_002423931.1 PFAM: restriction endonuclease; KEGG: mex:Mext_4774 restriction endonuclease YP_002423932.1 PFAM: PepSY-associated TM helix domain protein; KEGG: mex:Mext_4775 PepSY-associated TM helix domain-containing protein YP_002423933.1 KEGG: mex:Mext_4776 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_002423934.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_4777 adenylyl cyclase class-3/4/guanylyl cyclase YP_002423935.1 KEGG: mex:Mext_4778 hypothetical protein YP_002423936.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: mex:Mext_4779 cobyrinic acid ac-diamide synthase YP_002423937.1 KEGG: mex:Mext_4780 hypothetical protein YP_002423938.1 KEGG: mex:Mext_4781 hypothetical protein YP_002423939.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: mex:Mext_4782 chaperonin GroEL YP_002423940.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_002423941.1 PFAM: Mg+2 transporter protein CorA; KEGG: mex:Mext_4784 Mg+2 transporter protein CorA YP_002423942.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: mex:Mext_4785 multiple antibiotic resistance (MarC)-related protein YP_002423943.1 KEGG: mex:Mext_4786 O-antigen and teichoic acid-like export protein YP_002423944.1 PFAM: FAD linked oxidase; KEGG: mex:Mext_4787 FAD linked oxidase domain-containing protein YP_002423945.1 PFAM: phosphate transporter; KEGG: mex:Mext_4788 phosphate transporter YP_002423946.1 KEGG: mex:Mext_4789 hypothetical protein YP_002423947.1 KEGG: mex:Mext_4790 hypothetical protein YP_002423948.1 KEGG: mex:Mext_4791 hypothetical protein YP_002423949.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane YP_002423950.1 KEGG: mex:Mext_4793 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase; Cupin 2 conserved barrel domain protein YP_002423951.1 MDM; functions in conversion of succinate to propionate YP_002423952.1 KEGG: mex:Mext_4795 hypothetical protein YP_002423953.1 PFAM: protein of unknown function DUF817; KEGG: mex:Mext_4796 hypothetical protein YP_002423954.1 KEGG: mex:Mext_4797 hypothetical protein YP_002423955.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mex:Mext_4798 2-alkenal reductase YP_002423956.1 PFAM: heat shock protein DnaJ domain protein; KEGG: mex:Mext_4799 heat shock protein DnaJ domain-containing protein YP_002423957.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; sporulation domain protein; KEGG: mex:Mext_4800 serine-type D-Ala-D-Ala carboxypeptidase YP_002423958.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: mpo:Mpop_5344 ATP-dependent Clp protease adaptor protein ClpS YP_002423959.1 KEGG: mex:Mext_4802 ATP-dependent Clp protease ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: ATPase AAA; Clp domain protein; ATPase AAA; ATPase AAA-2 domain protein; ATP-dependent Clp protease ATP-binding subunit clpA; SMART: AAA ATPase YP_002423960.1 KEGG: mex:Mext_4803 hypothetical protein YP_002423961.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine YP_002423962.1 TIGRFAM: photosynthetic complex assembly protein 2; KEGG: mex:Mext_4805 hypothetical protein YP_002423963.1 oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis YP_002423964.1 KEGG: mex:Mext_4807 hypothetical protein YP_002423965.1 TIGRFAM: photosynthetic complex assembly protein; KEGG: mex:Mext_4808 hypothetical protein YP_002423966.1 KEGG: mex:Mext_4809 photosynthetic complex assembly protein YP_002423967.1 TIGRFAM: photosynthetic reaction center H subunit; PFAM: Photosynthetic reaction centre H subunit; KEGG: mex:Mext_4810 photosynthetic reaction center subunit H YP_002423968.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: mex:Mext_4811 PucC protein YP_002423969.1 catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine YP_002423970.1 light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production YP_002423971.1 involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; the enzyme from Rhodobacter capsulatus contains an Fe-S cluster; part of a complex with BchI, BchD, and BchH YP_002423972.1 light-independent reduction of protochlorophyllide to form chlorophyllide a YP_002423973.1 light-independent reduction of protochlorophyllide to form chlorophyllide a YP_002423974.1 PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: mex:Mext_4817 2-vinyl bacteriochlorophyllide hydratase YP_002423975.1 KEGG: mex:Mext_4818 cobalamin B12-binding YP_002423976.1 KEGG: mex:Mext_4819 transcriptional regulator PpsR; TIGRFAM: transcriptional regulator PpsR; PFAM: helix-turn-helix Fis-type; PAS fold domain protein; SMART: PAS domain containing protein YP_002423977.1 TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: mex:Mext_4820 bacteriochlorophyll/chlorophyll a synthase YP_002423978.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: mex:Mext_4821 PucC protein YP_002423979.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mex:Mext_4822 geranylgeranyl reductase YP_002423980.1 PFAM: TspO/MBR family protein; KEGG: mex:Mext_4823 TspO/MBR family protein YP_002423981.1 KEGG: mex:Mext_4824 hypothetical protein YP_002423982.1 PFAM: cytochrome C class I; KEGG: mex:Mext_4825 gluconate 2-dehydrogenase (acceptor) YP_002423983.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate YP_002423984.1 TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: mex:Mext_4827 6-phosphogluconolactonase YP_002423985.1 KEGG: mex:Mext_4828 hypothetical protein YP_002423986.1 responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease; Cgt; ChvA; NdvA YP_002423987.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mex:Mext_4830 MotA/TolQ/ExbB proton channel YP_002423988.1 PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_4831 OmpA/MotB domain-containing protein YP_002423989.1 PFAM: SCP-like extracellular; KEGG: mpo:Mpop_5377 SCP-like extracellular YP_002423990.1 PFAM: MscS Mechanosensitive ion channel; KEGG: mex:Mext_4833 MscS mechanosensitive ion channel YP_002423991.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mex:Mext_4834 HNH endonuclease YP_002423992.1 KEGG: mpo:Mpop_5380 hypothetical protein YP_002423993.1 PFAM: porin; KEGG: mpo:Mpop_5381 outer membrane insertion C-terminal signal YP_002423994.1 PFAM: porin opacity type; porin; KEGG: mex:Mext_4836 porin opacity type YP_002423995.1 KEGG: mex:Mext_4837 hypothetical protein YP_002423996.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate YP_002423997.1 PFAM: protein of unknown function DUF81; KEGG: mex:Mext_4839 hypothetical protein YP_002423998.1 KEGG: mex:Mext_4840 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_002423999.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: mex:Mext_4841 tRNA(Ile)-lysidine synthetase YP_002424000.1 TIGRFAM: tol-pal system protein YbgF; KEGG: mex:Mext_4842 tol-pal system protein YbgF YP_002424001.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_4843 peptidoglycan-associated lipoprotein YP_002424002.1 KEGG: mex:Mext_4844 hypothetical protein YP_002424003.1 PFAM: response regulator receiver; KEGG: mex:Mext_4845 response regulator receiver YP_002424004.1 KEGG: mex:Mext_4846 hypothetical protein YP_002424005.1 PFAM: GSCFA domain protein; KEGG: mex:Mext_4847 GSCFA domain-containing protein YP_002424006.1 KEGG: mex:Mext_4848 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase YP_002424007.1 PFAM: integrase family protein; KEGG: mex:Mext_4388 integrase family protein YP_002424008.1 KEGG: met:M446_5543 RecD/TraA family helicase; TIGRFAM: helicase, RecD/TraA family; SMART: DNA-binding protein; ATPase AAA YP_002424016.1 KEGG: mrd:Mrad2831_2006 heat shock protein DnaJ domain-containing protein YP_002424017.1 KEGG: bvi:Bcep1808_6235 hypothetical protein YP_002424018.1 KEGG: rsq:Rsph17025_4201 hypothetical protein YP_002424019.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: rpb:RPB_3655 SAM binding protein YP_002424020.1 KEGG: mrd:Mrad2831_5275 hypothetical protein YP_002424021.1 KEGG: ava:Ava_1781 hypothetical protein YP_002424022.1 PFAM: integrase family protein; KEGG: mex:Mext_4388 integrase family protein YP_002424023.1 KEGG: nha:Nham_3713 hypothetical protein YP_002424024.1 KEGG: mex:Mext_4849 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_002424025.1 PFAM: polysaccharide deacetylase; KEGG: mex:Mext_4850 polysaccharide deacetylase YP_002424026.1 PFAM: inner-membrane translocator; ABC transporter related; SMART: ATPase AAA; KEGG: mex:Mext_4851 ABC transporter YP_002424027.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_4852 inner-membrane translocator YP_002424028.1 PFAM: extracellular ligand-binding receptor; KEGG: mex:Mext_4853 extracellular ligand-binding receptor YP_002424029.1 KEGG: mex:Mext_4854 hypothetical protein YP_002424030.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_4855 GntR domain-containing protein YP_002424031.1 KEGG: mex:Mext_4857 hypothetical protein YP_002424033.1 PFAM: helix-turn-helix domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: mex:Mext_4859 PAS domain-containing protein YP_002424034.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4861 major facilitator transporter YP_002424035.1 PFAM: protein of unknown function DUF892; KEGG: mex:Mext_4862 hypothetical protein YP_002424036.1 PFAM: protein of unknown function UPF0061; KEGG: mex:Mext_4863 hypothetical protein YP_002424037.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: mex:Mext_4864 acetolactate synthase large subunit YP_002424038.1 KEGG: mex:Mext_4865 hypothetical protein YP_002424039.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; acetolactate synthase small subunit; KEGG: mex:Mext_4866 acetolactate synthase, small subunit YP_002424040.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_4867 glutathione S-transferase domain-containing protein YP_002424041.1 KEGG: mex:Mext_4868 asparagine synthase amidotransferase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase family amidotransferase; PFAM: glutamine amidotransferase class-II; asparagine synthase YP_002424042.1 PFAM: glutamine amidotransferase class-II; KEGG: mex:Mext_4869 glutamine amidotransferase class-II YP_002424043.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_4870 sigma-70 family RNA polymerase sigma factor YP_002424044.1 KEGG: mex:Mext_4871 hypothetical protein YP_002424045.1 KEGG: mex:Mext_4872 hypothetical protein YP_002424046.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: mex:Mext_4873 histidine kinase dimerisation/phosphoacceptor YP_002424047.1 PFAM: response regulator receiver; KEGG: mex:Mext_4874 response regulator receiver YP_002424048.1 KEGG: mex:Mext_4875 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; MHYT domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein YP_002424049.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_4876 cyclic nucleotide-binding YP_002424050.1 KEGG: mex:Mext_4877 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; response regulator receiver; GAF domain protein; Sigma-70 region 4 type 2; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002424052.1 KEGG: met:M446_0726 hypothetical protein YP_002424054.1 KEGG: mpo:Mpop_5454 hypothetical protein YP_002424055.1 KEGG: vei:Veis_3747 hypothetical protein YP_002424057.1 KEGG: ypg:YpAngola_0075 hypothetical protein YP_002424058.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: bov:BOV_0279 recombinase YP_002424059.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0141 chemotaxis sensory transducer YP_002424060.1 KEGG: mex:Mext_0140 hypothetical protein YP_002424061.1 KEGG: mpo:Mpop_0307 hypothetical protein YP_002424062.1 KEGG: mpo:Mpop_3310 hypothetical protein YP_002424063.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_0102 alpha/beta hydrolase fold YP_002424064.1 PFAM: integrase catalytic region; KEGG: mpo:Mpop_3817 integrase catalytic region YP_002424065.1 PFAM: transposase IS3/IS911 family protein; KEGG: mpo:Mpop_3816 transposase IS3/IS911 family protein YP_002424066.1 KEGG: mpo:Mpop_4105 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002424067.1 PFAM: AMP-dependent synthetase and ligase; KEGG: azc:AZC_2874 AMP-dependent synthetase YP_002424070.1 KEGG: vei:Veis_3747 hypothetical protein YP_002424071.1 PFAM: integrase family protein; KEGG: ret:RHE_CH00241 recombinase protein, phage integrase family YP_002424072.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mrd:Mrad2831_5257 YVTN beta-propeller repeat-containing protein YP_002424073.1 KEGG: mrd:Mrad2831_4216 sulfite:cytochrome C oxidoreductase subunit B YP_002424074.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: mrd:Mrad2831_4215 oxidoreductase molybdopterin binding YP_002424075.1 KEGG: xau:Xaut_2673 transmembrane anti-sigma factor YP_002424076.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: xau:Xaut_2674 ECF subfamily RNA polymerase sigma-24 factor YP_002424077.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: mpo:Mpop_0054 GntR family transcriptional regulator with aminotransferase domain YP_002424078.1 KEGG: mpo:Mpop_0055 hypothetical protein YP_002424079.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mpo:Mpop_0056 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_002424080.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mpo:Mpop_0057 radical SAM protein YP_002424081.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpo:Mpop_0058 GCN5-related N-acetyltransferase YP_002424082.1 PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: mpo:Mpop_0059 AIR synthase related protein YP_002424083.1 PFAM: glycosyl transferase group 1; KEGG: mpo:Mpop_0061 glycosyl transferase group 1 YP_002424084.1 KEGG: mpo:Mpop_0062 hypothetical protein YP_002424085.1 PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpo:Mpop_0063 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002424086.1 PFAM: cobalamin synthesis CobW domain protein; KEGG: mrd:Mrad2831_0862 cobalamin synthesis protein P47K YP_002424088.1 KEGG: rpt:Rpal_1148 hypothetical protein YP_002424089.1 PFAM: resolvase; Recombinase; KEGG: nha:Nham_3864 recombinase YP_002424090.1 PFAM: resolvase; Recombinase; KEGG: mpo:Mpop_3842 resolvase domain YP_002424091.1 PFAM: chloride channel core; KEGG: met:M446_6166 chloride channel core YP_002424092.1 SMART: TIR protein; KEGG: mex:Mext_1920 TIR protein YP_002424094.1 KEGG: cbk:CLL_A2630 sec-C motif domain protein YP_002424096.1 PFAM: protein of unknown function DUF323; KEGG: sco:SCO0305 hypothetical protein YP_002424097.1 PFAM: UvrD/REP helicase; KEGG: rpa:RPA2215 ATP-dependent exodeoxyribonuclease (subunit A) YP_002424098.1 KEGG: xau:Xaut_2986 hypothetical protein YP_002424099.1 PFAM: helicase; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: rpe:RPE_2448 DEAD/DEAH box helicase YP_002424100.1 KEGG: rpb:RPB_2542 hypothetical protein YP_002424101.1 KEGG: nha:Nham_2000 hypothetical protein YP_002424102.1 KEGG: LOC771139; hypothetical protein LOC771139 YP_002424108.1 KEGG: rle:pRL100078 hypothetical protein YP_002424111.1 PFAM: alpha amylase; SMART: alpha amylase catalytic sub domain; KEGG: mba:Mbar_A1790 alpha-amylase YP_002424112.1 KEGG: rsq:Rsph17025_4384 hypothetical protein YP_002424113.1 KEGG: rsq:Rsph17025_4383 type I restriction-modification system methyltransferase subunit-like protein YP_002424114.1 KEGG: rha:RHA1_ro09119 hypothetical protein YP_002424115.1 KEGG: rfr:Rfer_1067 hypothetical protein YP_002424116.1 PFAM: Domain of unknown function DUF1863; KEGG: pca:Pcar_2917 hypothetical protein YP_002424117.1 SMART: TIR protein; KEGG: nwi:Nwi_0257 hypothetical protein YP_002424118.1 PFAM: protein of unknown function DUF1275; KEGG: mpo:Mpop_2916 protein of unknown function DUF1275 YP_002424119.1 PFAM: integrase; KEGG: mpo:Mpop_2395 integrase YP_002424120.1 PFAM: transposase mutator type; KEGG: nha:Nham_3015 transposase, mutator type YP_002424121.1 PFAM: transposase IS111A/IS1328/IS1533; KEGG: mex:Mext_3686 transposase IS116/IS110/IS902 family protein YP_002424122.1 PFAM: transposase mutator type; KEGG: met:M446_7018 hypothetical protein YP_002424123.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: pyrrolo-quinoline quinone; KEGG: mex:Mext_1809 methanol/ethanol family PQQ-dependent dehydrogenase YP_002424124.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: bbt:BBta_5349 two-component sensor histidine kinase YP_002424125.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpo:Mpop_3468 two component transcriptional regulator, LuxR family YP_002424126.1 PFAM: integrase; KEGG: nwi:Nwi_2918 integrase, catalytic region YP_002424127.1 PFAM: integrase; KEGG: gdi:GDI0980 integrase YP_002424128.1 PFAM: transposase IS3/IS911 family protein; KEGG: sal:Sala_0416 transposase IS3/IS911 YP_002424129.1 PFAM: integrase; transposase IS3/IS911 family protein; KEGG: nwi:Nwi_3112 helix-turn-helix, fis-type YP_002424130.1 PFAM: transposase IS3/IS911 family protein; KEGG: nwi:Nwi_3087 transposase YP_002424131.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ecp:ECP_4551 transposase YP_002424132.1 PFAM: CBS domain containing protein; HPP family protein; KEGG: mex:Mext_2087 HPP family protein? YP_002424134.1 KEGG: mex:Mext_2817 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_002424135.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mlo:mlr2177 hypothetical protein YP_002424136.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: oan:Oant_0300 Glu/Leu/Phe/Val dehydrogenase YP_002424137.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate YP_002424138.1 TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; KEGG: mpo:Mpop_1834 squalene-associated FAD-dependent desaturase YP_002424139.1 PFAM: homospermidine synthase; KEGG: mex:Mext_2042 homospermidine synthase YP_002424140.1 KEGG: mex:Mext_3358 hypothetical protein YP_002424141.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mpo:Mpop_4181 GreA/GreB family elongation factor YP_002424143.1 KEGG: noc:Noc_1918 transcription elongation factor YP_002424144.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mex:Mext_3357 transcription elongation factor GreA/GreB domain-containing protein YP_002424148.1 PFAM: UspA domain protein; KEGG: pla:Plav_3480 UspA domain-containing protein YP_002424149.1 KEGG: mpo:Mpop_3736 sigma 54 modulation protein/ribosomal protein S30EA YP_002424151.1 KEGG: rle:pRL70033 hypothetical protein YP_002424152.1 KEGG: rru:Rru_A0502 hypothetical protein YP_002424153.1 KEGG: gdi:GDI2860 integrase YP_002424154.1 PFAM: transposase IS3/IS911 family protein; KEGG: sal:Sala_0416 transposase IS3/IS911 YP_002424155.1 PFAM: integrase; KEGG: gdi:GDI0980 integrase YP_002424156.1 KEGG: mrd:Mrad2831_6417 resolvase domain-containing protein YP_002424157.1 KEGG: nwi:Nwi_3121 hypothetical protein YP_002424158.1 KEGG: nwi:Nwi_2088 hypothetical protein YP_002424159.1 PFAM: ATPase AAA; SMART: AAA ATPase; KEGG: met:M446_0961 ATPase central domain-containing protein YP_002424160.1 TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: prenyltransferase/squalene oxidase; KEGG: gbe:GbCGDNIH1_2107 squalene--hopene cyclase YP_002424161.1 PFAM: regulatory protein TetR; KEGG: mrd:Mrad2831_0286 TetR family transcriptional regulator YP_002424162.1 PFAM: small multidrug resistance protein; KEGG: hne:HNE_0908 SMR family multidrug efflux pump YP_002424163.1 PFAM: regulatory protein TetR; KEGG: rpd:RPD_3328 regulatory protein, TetR YP_002424164.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mrd:Mrad2831_0285 RND family efflux transporter MFP subunit YP_002424165.1 TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mrd:Mrad2831_0284 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_002424166.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mpo:Mpop_3694 integral membrane sensor signal transduction histidine kinase YP_002424167.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: mpo:Mpop_3695 two component, sigma54 specific, transcriptional regulator, fis family YP_002424168.1 PFAM: major facilitator superfamily MFS_1; KEGG: mpo:Mpop_3696 major facilitator superfamily MFS_1 YP_002424169.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mpo:Mpop_3697 TonB-dependent receptor YP_002424170.1 KEGG: mex:Mext_0768 transposase YP_002424171.1 KEGG: mpo:Mpop_3698 hypothetical protein YP_002424172.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: mpo:Mpop_3699 cytochrome-c peroxidase YP_002424173.1 PFAM: integrase; transposase IS3/IS911 family protein; KEGG: nwi:Nwi_3112 helix-turn-helix, fis-type YP_002424174.1 PFAM: transposase IS3/IS911 family protein; KEGG: nwi:Nwi_3087 transposase YP_002424175.1 KEGG: mrd:Mrad2831_6176 hypothetical protein YP_002424176.1 KEGG: azc:AZC_3125 hypothetical protein YP_002424177.1 KEGG: mpo:Mpop_3704 hypothetical protein YP_002424178.1 KEGG: mpo:Mpop_3705 hypothetical protein YP_002424179.1 TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein LysR; KEGG: mpo:Mpop_3706 ModE family transcriptional regulator YP_002424180.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mpo:Mpop_3707 molybdenum cofactor synthesis domain protein YP_002424181.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: gdi:GDI2530 NADP-dependent alcohol dehydrogenase C YP_002424182.1 TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mpo:Mpop_3709 molybdenum ABC transporter periplasmic molybdate-binding protein YP_002424183.1 TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mpo:Mpop_3710 molybdate ABC transporter inner membrane subunit YP_002424184.1 KEGG: mpo:Mpop_3711 molybdate ABC transporter ATPase subunit; TIGRFAM: molybdate ABC transporter ATPase; PFAM: ABC transporter related; TOBE domain protein; SMART: ATPase AAA YP_002424185.1 PFAM: TOBE domain protein; KEGG: mpo:Mpop_3712 TOBE domain protein YP_002424186.1 PFAM: resolvase; Resolvase helix-turn-helix domain protein; KEGG: mrd:Mrad2831_6417 resolvase domain-containing protein YP_002424187.1 KEGG: mrd:Mrad2831_5044 hypothetical protein YP_002424188.1 PFAM: acetone carboxylase subunit gamma; KEGG: azc:AZC_2921 acetone carboxylase subunit gamma YP_002424189.1 PFAM: hydantoinase B/oxoprolinase; KEGG: azc:AZC_2922 acetone carboxylase subunit alpha YP_002424190.1 PFAM: hydantoinase/oxoprolinase; hydantoinaseoxoprolinase domain protein; KEGG: azc:AZC_2923 acetone carboxylase subunit beta YP_002424191.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: azc:AZC_2924 sigma54 specific transcriptional regulator YP_002424192.1 PFAM: integrase; KEGG: bcj:BCAM1952 transposase YP_002424193.1 PFAM: transposase IS3/IS911 family protein; KEGG: dde:Dde_2906 Fis family transcriptional regulator YP_002424194.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mpo:Mpop_1933 response regulator receiver modulated diguanylate cyclase YP_002424195.1 KEGG: mrd:Mrad2831_6409 hypothetical protein YP_002424196.1 KEGG: mlo:msr9708 hypothetical protein YP_002424197.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mrd:Mrad2831_4324 MucR family transcriptional regulator YP_002424198.1 PFAM: protein of unknown function DUF736; KEGG: pde:Pden_1518 protein of unknown function DUF736 YP_002424199.1 KEGG: rpc:RPC_2516 hypothetical protein YP_002424200.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: rba:RB4967 DeoR family transcriptional regulator YP_002424201.1 PFAM: endoribonuclease L-PSP; KEGG: nfa:nfa26270 endoribonuclease YP_002424202.1 KEGG: syf:Synpcc7942_2103 hypothetical protein YP_002424203.1 PFAM: transposase IS3/IS911 family protein; KEGG: mlo:msr5972 transposase YP_002424204.1 KEGG: mlo:mlr6150 transposase YP_002424205.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ecp:ECP_4551 transposase YP_002424206.1 PFAM: aminoglycoside phosphotransferase; KEGG: mex:Mext_1755 aminoglycoside phosphotransferase YP_002424208.1 PFAM: glycosyl transferase family 28; KEGG: mpo:Mpop_2090 glycosyl transferase family 28 YP_002424209.1 KEGG: mpo:Mpop_2089 hypothetical protein YP_002424210.1 KEGG: mrd:Mrad2831_6474 hypothetical protein YP_002424211.1 KEGG: oan:Oant_4758 hypothetical protein YP_002424212.1 KEGG: mes:Meso_4589 hypothetical protein YP_002424213.1 KEGG: mes:Meso_3818 hypothetical protein YP_002424214.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: xau:Xaut_5007 prevent-host-death family protein YP_002424215.1 KEGG: rle:pRL100319 hypothetical protein YP_002424216.1 KEGG: sal:Sala_2631 hypothetical protein YP_002424217.1 KEGG: mpo:Mpop_1378 hypothetical protein YP_002424218.1 PFAM: PilT protein; KEGG: mpo:Mpop_1379 PilT protein YP_002424219.1 PFAM: protein of unknown function DUF736; KEGG: gdi:GDI2877 hypothetical protein YP_002424220.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rru:Rru_A0755 chemotaxis sensory transducer YP_002424221.1 PFAM: transposase mutator type; KEGG: mpo:Mpop_5445 transposase mutator type YP_002424222.1 PFAM: domain of unknown function DUF1738; KEGG: mrd:Mrad2831_6049 hypothetical protein YP_002424223.1 KEGG: mes:Meso_3816 hypothetical protein YP_002424228.1 SMART: ParB domain protein nuclease; KEGG: rpa:RPA2251 plasmid stabilization protein YP_002424229.1 KEGG: bbt:BBta_7412 hypothetical protein YP_002424230.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mrd:Mrad2831_3868 MucR family transcriptional regulator YP_002424231.1 KEGG: mes:Meso_3828 probably methylase/helicase YP_002424232.1 KEGG: mrd:Mrad2831_6058 hypothetical protein YP_002424233.1 KEGG: mrd:Mrad2831_6059 hypothetical protein YP_002424235.1 KEGG: mrd:Mrad2831_6064 hypothetical protein YP_002424236.1 VirD4 family YP_002424237.1 PFAM: Conjugal transfer TraD family protein; KEGG: mrd:Mrad2831_6101 conjugal transfer protein TraD YP_002424238.1 KEGG: mrd:Mrad2831_6102 hypothetical protein YP_002424239.1 TIGRFAM: Ti-type conjugative transfer relaxase TraA; PFAM: MobA/MobL protein; KEGG: rle:pRL80122 conjugal transfer protein TraA YP_002424240.1 KEGG: gox:GOX2661 hypothetical protein YP_002424243.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: dsy:DSY2769 hypothetical protein YP_002424244.1 KEGG: pau:PA14_12280 apolipoprotein N-acyltransferase YP_002424245.1 KEGG: mrd:Mrad2831_6465 hypothetical protein YP_002424246.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: rpa:RPA2080 zinc-containing dehydrogenase YP_002424247.1 PFAM: phosphoglycerate mutase; KEGG: swi:Swit_5116 phosphoglycerate mutase YP_002424248.1 KEGG: met:M446_6984 hypothetical protein YP_002424250.1 KEGG: mrd:Mrad2831_6465 hypothetical protein YP_002424251.1 KEGG: bvi:Bcep1808_7364 hypothetical protein YP_002424252.1 KEGG: lpf:lpl0498 hypothetical protein YP_002424255.1 KEGG: lpc:LPC_2892 IcmE (DotG) YP_002424256.1 KEGG: bvi:Bcep1808_7368 IcmK-like type IV secretion system protein YP_002424257.1 KEGG: bvi:Bcep1808_7369 hypothetical protein YP_002424259.1 KEGG: acb:A1S_0640 hypothetical protein YP_002424260.1 KEGG: ypi:YpsIP31758_B0118 type IV secretion system protein IcmC/DotIE YP_002424262.1 KEGG: bvi:Bcep1808_7385 DotC protein YP_002424263.1 PFAM: type II secretion system protein E; KEGG: cbd:CBUD_0350 Dot/Icm secretion system ATPase DotB YP_002424264.1 PFAM: protein of unknown function DUF882; peptidase M15A; KEGG: bvi:Bcep1808_7376 hypothetical protein YP_002424266.1 KEGG: bvi:Bcep1808_7328 hypothetical protein YP_002424268.1 PFAM: peptidase M23; KEGG: pvi:Cvib_1676 peptidase M23B YP_002424269.1 KEGG: bvi:Bcep1808_7327 hypothetical protein YP_002424270.1 KEGG: bvi:Bcep1808_7326 hypothetical protein YP_002424271.1 KEGG: bvi:Bcep1808_7325 hypothetical protein YP_002424272.1 KEGG: rme:Rmet_2827 TraY/DotA-like type IV secretion system protein YP_002424274.1 KEGG: bja:bll8291 transposase YP_002424275.1 TIGRFAM: plasmid partitioning protein RepA; PFAM: regulatory protein MerR; cobyrinic acid ac-diamide synthase; KEGG: mrd:Mrad2831_5912 plasmid partitioning protein RepA YP_002424276.1 TIGRFAM: parB-like partition protein; plasmid partitioning protein RepB; PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: mrd:Mrad2831_5913 plasmid partitioning protein RepB YP_002424277.1 PFAM: replication protein C; KEGG: mes:Meso_4192 replication protein C YP_002424278.1 KEGG: rle:pRL70033 hypothetical protein YP_002424279.1 PFAM: integrase; KEGG: bja:bll5000 transposase YP_002424280.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bja:bll4999 transposase YP_002424281.1 KEGG: met:M446_6861 transposase YP_002424282.1 KEGG: mex:Mext_0768 transposase YP_002424283.1 PFAM: resolvase; Resolvase helix-turn-helix domain protein; KEGG: mrd:Mrad2831_6417 resolvase domain-containing protein YP_002424284.1 PFAM: protein of unknown function DUF497; KEGG: cyt:cce_4967 hypothetical protein YP_002424285.1 KEGG: ccr:CC_0488 hypothetical protein YP_002424286.1 KEGG: scl:sce5216 transposase, probable YP_002424287.1 KEGG: mst:Msp_0767 helicase YP_002424288.1 KEGG: pla:Plav_2607 methylase YP_002424290.1 KEGG: mpo:Mpop_3783 hypothetical protein YP_002424291.1 PFAM: major royal jelly protein; KEGG: mrd:Mrad2831_5890 hypothetical protein YP_002424292.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: oan:Oant_4628 transposase IS116/IS110/IS902 family protein YP_002424293.1 PFAM: transposase IS3/IS911 family protein; KEGG: sal:Sala_0416 transposase IS3/IS911 YP_002424294.1 PFAM: integrase; KEGG: gdi:GDI0980 integrase YP_002424295.1 PFAM: PilT protein; KEGG: ccr:CC_0841 hypothetical protein YP_002424296.1 TIGRFAM: AbrB family transcriptional regulator; KEGG: gox:GOX2681 hypothetical protein YP_002424297.1 PFAM: integrase; KEGG: mrd:Mrad2831_6128 integrase YP_002424298.1 TIGRFAM: addiction module antidote protein, HigA family; SMART: helix-turn-helix domain protein; KEGG: rru:Rru_A0006 plasmid maintenance system antidote protein YP_002424299.1 KEGG: ccr:CC_2700 hypothetical protein YP_002424300.1 KEGG: ccr:CC_2701 hypothetical protein YP_002424301.1 PFAM: cyclic nucleotide-binding; KEGG: mrd:Mrad2831_6138 cyclic nucleotide-binding YP_002424302.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rpc:RPC_1792 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_002424303.1 KEGG: rpc:RPC_1793 hypothetical protein YP_002424304.1 KEGG: rpb:RPB_3790 hypothetical protein YP_002424305.1 PFAM: integrase; KEGG: acr:Acry_3593 integrase catalytic subunit YP_002424306.1 PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; KEGG: nha:Nham_2786 IstB-like ATP-binding protein YP_002424307.1 KEGG: gur:Gura_2918 hypothetical protein YP_002424310.1 KEGG: eca:ECA0413 hypothetical protein YP_002424311.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_1266 transposase, IS4 YP_002424312.1 KEGG: met:M446_2802 hypothetical protein YP_002424313.1 KEGG: met:M446_6572 hypothetical protein YP_002424314.1 KEGG: xau:Xaut_1068 hypothetical protein YP_002424315.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: pen:PSEEN4433 subtilisin-like serine protease YP_002424316.1 KEGG: bbt:BBta_7549 hypothetical protein YP_002424317.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_1922 metallophosphoesterase YP_002424318.1 KEGG: mpo:Mpop_2589 hypothetical protein YP_002424319.1 PFAM: peptidase M41; ATPase AAA central domain protein; SMART: ATPase AAA; KEGG: mrd:Mrad2831_4675 ATPase central domain-containing protein YP_002424320.1 KEGG: mpo:Mpop_4063 metallophosphoesterase YP_002424321.1 KEGG: mpo:Mpop_2594 hypothetical protein YP_002424322.1 KEGG: mpo:Mpop_2595 hypothetical protein YP_002424323.1 SMART: hypothetical protein; KEGG: sco:SCO5953 hypothetical protein YP_002424324.1 SMART: hypothetical protein; pyrrolo-quinoline quinone; KEGG: mmi:MMAR_3405 regulatory protein YP_002424325.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mpo:Mpop_3807 TonB-dependent receptor plug YP_002424326.1 PFAM: periplasmic binding protein; KEGG: mpo:Mpop_3806 periplasmic binding protein YP_002424327.1 PFAM: transporter permease; KEGG: mex:Mext_2927 transporter permease YP_002424328.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mrd:Mrad2831_6080 ABC transporter YP_002424329.1 KEGG: mpo:Mpop_3803 hypothetical protein YP_002424330.1 KEGG: mpo:Mpop_3802 hypothetical protein YP_002424331.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mrd:Mrad2831_4063 TonB-dependent receptor plug YP_002424332.1 PFAM: MOFRL domain protein; KEGG: mex:Mext_2747 hydroxypyruvate reductase YP_002424333.1 TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mpo:Mpop_0969 precorrin-4 C11-methyltransferase YP_002424334.1 KEGG: mex:Mext_1035 CobE protein YP_002424335.1 KEGG: mrd:Mrad2831_3121 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_002424336.1 KEGG: mrd:Mrad2831_3120 precorrin-6A reductase; TIGRFAM: precorrin-6x reductase; PFAM: precorrin-6x reductase CbiJ/CobK YP_002424337.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: met:M446_2442 precorrin-3B C17-methyltransferase YP_002424338.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mpo:Mpop_1433 precorrin-2 C20-methyltransferase YP_002424339.1 PFAM: precorrin-8X methylmutase CbiC/CobH; KEGG: mpo:Mpop_1434 precorrin-8X methylmutase YP_002424340.1 KEGG: mrd:Mrad2831_3114 cobalamin biosynthesis protein CobW YP_002424341.1 KEGG: mrd:Mrad2831_1569 hypothetical protein YP_002424342.1 KEGG: reu:Reut_A2713 imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; amidohydrolase YP_002424343.1 TIGRFAM: methyltransferase MtaA/CmuA family; PFAM: uroporphyrinogen decarboxylase (URO-D); methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: mta:Moth_1447 cobalamin B12-binding YP_002424345.1 TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; KEGG: azc:AZC_1492 formyltetrahydrofolate deformylase YP_002424346.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: pde:Pden_2614 methenyltetrahydrofolate cyclohydrolase YP_002424347.1 KEGG: met:M446_0475 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_002424348.1 KEGG: ret:RHE_CH02443 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_002424349.1 KEGG: mpo:Mpop_4062 hypothetical protein YP_002424350.1 KEGG: mpo:Mpop_4063 metallophosphoesterase YP_002424351.1 PFAM: metallophosphoesterase; KEGG: mpo:Mpop_4064 metallophosphoesterase YP_002424352.1 KEGG: mpo:Mpop_4065 hypothetical protein YP_002424353.1 KEGG: mpo:Mpop_2596 transcriptional regulator, XRE family YP_002424354.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mrd:Mrad2831_1242 integral membrane sensor signal transduction histidine kinase YP_002424355.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mrd:Mrad2831_1241 two component transcriptional regulator YP_002424356.1 TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: mrd:Mrad2831_1239 RND family efflux transporter MFP subunit YP_002424357.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mrd:Mrad2831_1238 CzcA family heavy metal efflux protein YP_002424359.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: azo:azo0308 probable phenylacetic acid degradation NADH oxidoreductase PaaE YP_002424360.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: aeh:Mlg_1275 C4-dicarboxylate transporter/malic acid transport protein YP_002424361.1 KEGG: mmi:MMAR_4261 hypothetical protein YP_002424362.1 PFAM: chemotaxis sensory transducer; KEGG: azc:AZC_0666 chemotaxis sensory transducer YP_002424363.1 PFAM: cobalbumin biosynthesis protein; KEGG: mrd:Mrad2831_1469 adenosylcobinamide-phosphate guanylyltransferase YP_002424364.1 KEGG: mrd:Mrad2831_1470 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_002424365.1 TIGRFAM: cobyric acid synthase CobQ; PFAM: cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: mrd:Mrad2831_1471 cobyric acid synthase CobQ YP_002424366.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: mex:Mext_4724 cobalamin biosynthesis protein CobD YP_002424367.1 PFAM: regulatory protein MerR; KEGG: afe:Lferr_2140 MerR family transcriptional regulator YP_002424368.1 PFAM: methylenetetrahydrofolate reductase; KEGG: jan:Jann_1978 metfprotein-like YP_002424369.1 Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. MtrH catalyzes the transfer of the methyl group from methyl-tetrahydromethanopterin to the corrinoid prosthetic group of mtrA YP_002424370.1 KEGG: dsy:DSY1510 hypothetical protein YP_002424371.1 TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; KEGG: met:M446_2454 cobalamin biosynthesis protein CbiD YP_002424372.1 TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: xau:Xaut_5025 aminotransferase class I and II YP_002424373.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pla:Plav_1055 uroporphyrin-III C-methyltransferase YP_002424374.1 TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: smd:Smed_1562 cob(II)yrinic acid a,c-diamide reductase YP_002424375.1 KEGG: mrd:Mrad2831_5261 transmembrane anti-sigma factor YP_002424376.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mrd:Mrad2831_5260 ECF subfamily RNA polymerase sigma-24 factor YP_002424377.1 PFAM: protein of unknown function DUF305; KEGG: mrd:Mrad2831_5258 hypothetical protein YP_002424479.1 KEGG: mpo:Mpop_5430 hypothetical protein YP_002424480.1 KEGG: cak:Caul_4863 hypothetical protein YP_002424481.1 KEGG: mpo:Mpop_3482 hypothetical protein YP_002424482.1 KEGG: mrd:Mrad2831_6451 hypothetical protein YP_002424483.1 KEGG: met:M446_5137 flagellin domain-containing protein YP_002424484.1 KEGG: met:M446_5138 flagellar biosynthesis repressor FlbT YP_002424485.1 KEGG: rec:RHECIAT_CH0001128 hypothetical protein YP_002424486.1 KEGG: mpo:Mpop_5031 hypothetical protein YP_002424487.1 KEGG: mex:Mext_0496 hypothetical protein YP_002424488.1 KEGG: rle:RL2313 hypothetical protein YP_002424490.1 KEGG: bbt:BBta_1498 hypothetical protein YP_002424491.1 KEGG: met:M446_3327 hypothetical protein YP_002424492.1 KEGG: bte:BTH_II2324 1A family penicillin-binding protein YP_002424495.1 KEGG: kpn:KPN_01966 electron transport complex protein RnfC YP_002424496.1 KEGG: mex:Mext_2448 hypothetical protein YP_002424497.1 KEGG: mpo:Mpop_0877 hypothetical protein YP_002424498.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: met:M446_3124 cobyrinic acid ac-diamide synthase YP_002424501.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sru:SRU_1506 tyrosine recombinase XerC YP_002424502.1 KEGG: mpo:Mpop_1194 conserved hypothetical protein; putative flagellin C-ter domain YP_002424503.1 PFAM: flagellar FlbT family protein; KEGG: met:M446_0687 flagellar FlbT family protein YP_002424509.1 KEGG: met:M446_0803 hypothetical protein YP_002424511.1 KEGG: mex:Mext_1871 hypothetical protein YP_002424512.1 KEGG: mrd:Mrad2831_1256 hypothetical protein YP_002424513.1 KEGG: met:M446_0800 hypothetical protein YP_002424514.1 KEGG: mag:amb0657 hypothetical protein