-- dump date 20140619_144201 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 440085000001 SEQ_END SEQ_END NC_011757.1 5777908 5777908 DR NC_011757.1; contig end 5777908..5777908 Methylobacterium extorquens CM4 440085000002 SEQ_END SEQ_END NC_011758.1 380207 380207 DR NC_011758.1; contig end 380207..380207 Methylobacterium extorquens CM4 440085000003 SEQ_END SEQ_END NC_011760.1 22617 22617 DR NC_011760.1; contig end 22617..22617 Methylobacterium extorquens CM4 YP_002418899.1 CDS rpsT NC_011757.1 359 625 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 359..625 Methylobacterium extorquens CM4 7114060 YP_002418900.1 CDS dnaA NC_011757.1 1438 2943 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1438..2943 Methylobacterium extorquens CM4 7114061 YP_002418901.1 CDS Mchl_0003 NC_011757.1 3266 4387 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 3266..4387 Methylobacterium extorquens CM4 7114062 YP_002418902.1 CDS Mchl_0004 NC_011757.1 4428 5585 D KEGG: mex:Mext_0003 DNA replication and repair protein RecF; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; SMART: ATPase AAA; DNA replication and repair protein RecF 4428..5585 Methylobacterium extorquens CM4 7114063 YP_002418903.1 CDS Mchl_0005 NC_011757.1 5593 6204 D PFAM: lysine exporter (LYSE/YGGA); KEGG: mpo:Mpop_0005 lysine exporter protein (LysE/YggA); lysine exporter LysE/YggA 5593..6204 Methylobacterium extorquens CM4 7114064 YP_002418904.1 CDS Mchl_0006 NC_011757.1 6208 6432 R KEGG: mex:Mext_0005 transcription factor; hypothetical protein complement(6208..6432) Methylobacterium extorquens CM4 7114065 YP_002418905.1 CDS Mchl_0007 NC_011757.1 6543 8390 D KEGG: mex:Mext_0006 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase; HRDC domain protein; DEAD/DEAH box helicase; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; ATP-dependent DNA helicase RecQ 6543..8390 Methylobacterium extorquens CM4 7114066 YP_002418906.1 CDS Mchl_0008 NC_011757.1 8448 8786 R KEGG: mex:Mext_0007 hypothetical protein; hypothetical protein complement(8448..8786) Methylobacterium extorquens CM4 7114067 YP_002418907.1 CDS Mchl_0009 NC_011757.1 9102 9788 D KEGG: mex:Mext_0008 hypothetical protein; hypothetical protein 9102..9788 Methylobacterium extorquens CM4 7114068 YP_002418908.1 CDS Mchl_0010 NC_011757.1 9896 12097 D KEGG: mex:Mext_0009 RecD/TraA family helicase; TIGRFAM: helicase, RecD/TraA family; SMART: DNA-binding protein; ATPase AAA; RecD/TraA family helicase 9896..12097 Methylobacterium extorquens CM4 7114069 YP_002418909.1 CDS Mchl_0011 NC_011757.1 12241 13425 D KEGG: mex:Mext_0010 hypothetical protein; hypothetical protein 12241..13425 Methylobacterium extorquens CM4 7114070 YP_002418910.1 CDS Mchl_0012 NC_011757.1 13616 15841 D KEGG: mex:Mext_0011 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; phosphoribosylformylglycinamidine synthase II 13616..15841 Methylobacterium extorquens CM4 7114071 YP_002418911.1 CDS Mchl_0013 NC_011757.1 15868 16104 D PFAM: BolA family protein; KEGG: mex:Mext_0012 BolA family protein; BolA family protein 15868..16104 Methylobacterium extorquens CM4 7114072 YP_002418912.1 CDS Mchl_0014 NC_011757.1 16178 16513 D TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: mex:Mext_0013 glutaredoxin-like protein; glutaredoxin-like protein 16178..16513 Methylobacterium extorquens CM4 7114073 YP_002418913.1 CDS Mchl_0015 NC_011757.1 16586 17488 D PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_0014 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 16586..17488 Methylobacterium extorquens CM4 7114074 YP_002418914.1 CDS Mchl_0016 NC_011757.1 17597 18481 D PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: mex:Mext_0015 SMP-30/gluconolaconase/LRE domain-containing protein; SMP-30/gluconolaconase/LRE domain-containing protein 17597..18481 Methylobacterium extorquens CM4 7114075 YP_002418915.1 CDS Mchl_0017 NC_011757.1 18667 18882 D KEGG: mex:Mext_0016 hypothetical protein; hypothetical protein 18667..18882 Methylobacterium extorquens CM4 7114076 YP_002418916.1 CDS Mchl_0018 NC_011757.1 18910 19746 R KEGG: mex:Mext_0017 hypothetical protein; hypothetical protein complement(18910..19746) Methylobacterium extorquens CM4 7114077 YP_002418917.1 CDS Mchl_0019 NC_011757.1 20115 22160 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: mex:Mext_0018 ATPase domain-containing protein; PAS/PAC sensor hybrid histidine kinase complement(20115..22160) Methylobacterium extorquens CM4 7114078 YP_002418918.1 CDS Mchl_0020 NC_011757.1 22160 23722 R KEGG: mex:Mext_0019 non-specific serine/threonine protein kinase; PFAM: Circadian clock protein KaiC central region; KaiA binding; SMART: ATPase AAA; circadian clock protein KaiC complement(22160..23722) Methylobacterium extorquens CM4 7114079 YP_002418919.1 CDS Mchl_0021 NC_011757.1 24073 25278 D KEGG: mex:Mext_0020 hypothetical protein; hypothetical protein 24073..25278 Methylobacterium extorquens CM4 7114080 YP_002418920.1 CDS Mchl_0022 NC_011757.1 25309 26307 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_0021 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(25309..26307) Methylobacterium extorquens CM4 7114081 YP_002418921.1 CDS Mchl_0023 NC_011757.1 26430 27122 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_0022 GntR domain-containing protein; GntR family transcriptional regulator complement(26430..27122) Methylobacterium extorquens CM4 7114082 YP_002418922.1 CDS Mchl_0025 NC_011757.1 27765 29411 D TIGRFAM: malonate decarboxylase, subunit alpha; KEGG: mex:Mext_0024 malonate decarboxylase, subunit alpha; malonate decarboxylase subunit alpha 27765..29411 Methylobacterium extorquens CM4 7114084 YP_002418923.1 CDS Mchl_0026 NC_011757.1 29419 29727 D acyl carrier protein of malonate decarboxylase; malonate decarboxylase subunit delta 29419..29727 Methylobacterium extorquens CM4 7114085 YP_002418924.1 CDS Mchl_0027 NC_011757.1 29730 30662 D The subunit beta catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta 29730..30662 Methylobacterium extorquens CM4 7114086 YP_002418925.1 CDS Mchl_0028 NC_011757.1 30649 31365 D TIGRFAM: malonate decarboxylase, subunit gamma; PFAM: malonate decarboxylase subunit gamma; KEGG: mex:Mext_0027 malonate decarboxylase, subunit gamma; malonate decarboxylase subunit gamma 30649..31365 Methylobacterium extorquens CM4 7114087 YP_002418926.1 CDS Mchl_0029 NC_011757.1 31358 32017 D TIGRFAM: holo-ACP synthase, malonate decarboxylase-specific; KEGG: mex:Mext_0028 hypothetical protein; holo-ACP synthase, malonate decarboxylase-specific 31358..32017 Methylobacterium extorquens CM4 7114088 YP_002418927.1 CDS Mchl_0030 NC_011757.1 32014 32874 D KEGG: mex:Mext_0029 triphosphoribosyl-dephospho-CoA synthase MdcB; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; PFAM: triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA synthase MdcB 32014..32874 Methylobacterium extorquens CM4 7114089 YP_002418928.1 CDS Mchl_0031 NC_011757.1 32871 33794 D KEGG: mex:Mext_0030 acyl transferase domain-containing protein; acyl transferase domain-containing protein 32871..33794 Methylobacterium extorquens CM4 7114090 YP_002418929.1 CDS Mchl_0033 NC_011757.1 36407 37297 R KEGG: met:M446_1613 general secretion pathway protein K; general secretion pathway protein K complement(36407..37297) Methylobacterium extorquens CM4 7114092 YP_002418930.1 CDS Mchl_0037 NC_011757.1 38737 39381 R PFAM: electron transporter SCO1/SenC; KEGG: met:M446_1393 electron transporter SCO1/SenC; electron transporter SCO1/SenC complement(38737..39381) Methylobacterium extorquens CM4 7114096 YP_002418931.1 CDS Mchl_0038 NC_011757.1 39489 39758 R KEGG: met:M446_1394 hypothetical protein; hypothetical protein complement(39489..39758) Methylobacterium extorquens CM4 7114097 YP_002418932.1 CDS Mchl_0039 NC_011757.1 39881 42883 R PFAM: ricin B lectin; hypothetical protein; Domain of unknown function DUF1929; KEGG: met:M446_1395 galactose oxidase; Galactose oxidase complement(39881..42883) Methylobacterium extorquens CM4 7114098 YP_002418933.1 CDS Mchl_0040 NC_011757.1 43010 43741 R PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: mpo:Mpop_0070 IstB domain protein ATP-binding protein; IstB domain-containing protein ATP-binding protein complement(43010..43741) Methylobacterium extorquens CM4 7114099 YP_002418934.1 CDS Mchl_0041 NC_011757.1 43741 45246 R PFAM: integrase catalytic region; KEGG: mpo:Mpop_0069 integrase catalytic region; integrase catalytic subunit complement(43741..45246) Methylobacterium extorquens CM4 7114100 YP_002418935.1 CDS Mchl_0043 NC_011757.1 45544 47052 R PFAM: phospholipase D/transphosphatidylase; KEGG: mex:Mext_0106 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase complement(45544..47052) Methylobacterium extorquens CM4 7114102 YP_002418936.1 CDS Mchl_0044 NC_011757.1 47937 50369 D KEGG: bxe:Bxe_A2619 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 47937..50369 Methylobacterium extorquens CM4 7114103 YP_002418937.1 CDS Mchl_0047 NC_011757.1 51179 51424 R KEGG: mex:Mext_0057 hypothetical protein; hypothetical protein complement(51179..51424) Methylobacterium extorquens CM4 7114106 YP_002418938.1 CDS Mchl_0048 NC_011757.1 51543 52610 R PFAM: peptidase M20; peptidase M42 family protein; KEGG: mex:Mext_0058 peptidase M42 family protein; peptidase M42 family protein complement(51543..52610) Methylobacterium extorquens CM4 7114107 YP_002418939.1 CDS Mchl_0049 NC_011757.1 53376 54644 R PFAM: transposase mutator type; KEGG: mrd:Mrad2831_2616 transposase mutator type; transposase mutator type complement(53376..54644) Methylobacterium extorquens CM4 7114108 YP_002418940.1 CDS Mchl_0050 NC_011757.1 55017 55289 D KEGG: mrd:Mrad2831_5711 hypothetical protein; hypothetical protein 55017..55289 Methylobacterium extorquens CM4 7114109 YP_002418941.1 CDS Mchl_0052 NC_011757.1 56359 56604 D KEGG: mex:Mext_3809 hypothetical protein; hypothetical protein 56359..56604 Methylobacterium extorquens CM4 7114111 YP_002418942.1 CDS Mchl_0053 NC_011757.1 56766 57083 R KEGG: mex:Mext_1866 hypothetical protein; hypothetical protein complement(56766..57083) Methylobacterium extorquens CM4 7114112 YP_002418943.1 CDS Mchl_0055 NC_011757.1 57564 57809 R hypothetical protein complement(57564..57809) Methylobacterium extorquens CM4 7113897 YP_002418944.1 CDS Mchl_0057 NC_011757.1 58062 58226 R hypothetical protein complement(58062..58226) Methylobacterium extorquens CM4 7113980 YP_002418945.1 CDS Mchl_0059 NC_011757.1 59438 59674 R KEGG: mex:Mext_0782 hypothetical protein; hypothetical protein complement(59438..59674) Methylobacterium extorquens CM4 7113982 YP_002418946.1 CDS Mchl_0060 NC_011757.1 59671 60825 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: response regulator receiver; KEGG: mex:Mext_0783 cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator complement(59671..60825) Methylobacterium extorquens CM4 7113983 YP_002418947.1 CDS Mchl_0061 NC_011757.1 61094 61807 D PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_0075 hypothetical protein; cyclic nucleotide-binding protein 61094..61807 Methylobacterium extorquens CM4 7113984 YP_002418948.1 CDS Mchl_0062 NC_011757.1 61807 62067 D KEGG: mex:Mext_0785 hypothetical protein; hypothetical protein 61807..62067 Methylobacterium extorquens CM4 7113985 YP_002418949.1 CDS Mchl_0063 NC_011757.1 62361 64874 R KEGG: mrd:Mrad2831_4387 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase complement(62361..64874) Methylobacterium extorquens CM4 7113986 YP_002418950.1 CDS Mchl_0064 NC_011757.1 65143 65886 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mrd:Mrad2831_1051 methyltransferase type 11; type 11 methyltransferase complement(65143..65886) Methylobacterium extorquens CM4 7113987 YP_002418951.1 CDS Mchl_0065 NC_011757.1 65962 66474 D KEGG: mpo:Mpop_3826 hypothetical protein; hypothetical protein 65962..66474 Methylobacterium extorquens CM4 7113988 YP_002418952.1 CDS Mchl_0066 NC_011757.1 66523 66729 R KEGG: mpo:Mpop_4881 hypothetical protein; hypothetical protein complement(66523..66729) Methylobacterium extorquens CM4 7113989 YP_002418953.1 CDS Mchl_0067 NC_011757.1 67354 67593 D KEGG: hypothetical protein; hypothetical protein 67354..67593 Methylobacterium extorquens CM4 7113990 YP_002418954.1 CDS Mchl_0068 NC_011757.1 67612 67905 R KEGG: mex:Mext_0117 hypothetical protein; hypothetical protein complement(67612..67905) Methylobacterium extorquens CM4 7113991 YP_002418955.1 CDS Mchl_0069 NC_011757.1 68105 68266 R hypothetical protein complement(68105..68266) Methylobacterium extorquens CM4 7113992 YP_002418956.1 CDS Mchl_0070 NC_011757.1 69036 69449 R PFAM: isochorismatase hydrolase; KEGG: mpo:Mpop_0480 isochorismatase hydrolase; isochorismatase hydrolase complement(69036..69449) Methylobacterium extorquens CM4 7113994 YP_002418957.1 CDS Mchl_0072 NC_011757.1 70657 70860 R KEGG: mex:Mext_0146 hypothetical protein; hypothetical protein complement(70657..70860) Methylobacterium extorquens CM4 7113996 YP_002418958.1 CDS Mchl_0073 NC_011757.1 70992 71453 R KEGG: mex:Mext_0147 hypothetical protein; hypothetical protein complement(70992..71453) Methylobacterium extorquens CM4 7113997 YP_002418959.1 CDS Mchl_0075 NC_011757.1 72890 73093 D KEGG: gdi:GDI0123 hypothetical protein; hypothetical protein 72890..73093 Methylobacterium extorquens CM4 7113999 YP_002418960.1 CDS Mchl_0076 NC_011757.1 73189 73758 D PFAM: integrase family protein; KEGG: mex:Mext_0081 integrase family protein; integrase family protein 73189..73758 Methylobacterium extorquens CM4 7114000 YP_002418961.1 CDS Mchl_0077 NC_011757.1 73800 74081 R KEGG: mex:Mext_0084 hypothetical protein; hypothetical protein complement(73800..74081) Methylobacterium extorquens CM4 7114001 YP_002418962.1 CDS Mchl_0078 NC_011757.1 74139 75338 R KEGG: mex:Mext_0085 hypothetical protein; hypothetical protein complement(74139..75338) Methylobacterium extorquens CM4 7114002 YP_002418963.1 CDS Mchl_0079 NC_011757.1 75406 75591 D KEGG: mex:Mext_0168 hypothetical protein; hypothetical protein 75406..75591 Methylobacterium extorquens CM4 7114003 YP_002418964.1 CDS Mchl_0080 NC_011757.1 75596 76063 D KEGG: mex:Mext_0169 hypothetical protein; hypothetical protein 75596..76063 Methylobacterium extorquens CM4 7114004 YP_002418965.1 CDS Mchl_0081 NC_011757.1 76187 76762 D KEGG: mex:Mext_0088 hypothetical protein; hypothetical protein 76187..76762 Methylobacterium extorquens CM4 7114005 YP_002418966.1 CDS Mchl_0082 NC_011757.1 76824 77417 D PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_0170 ROSMUCR transcriptional regulator; MucR family transcriptional regulator 76824..77417 Methylobacterium extorquens CM4 7114006 YP_002418967.1 CDS Mchl_0083 NC_011757.1 77462 77770 D hypothetical protein 77462..77770 Methylobacterium extorquens CM4 7114007 YP_002418968.1 CDS Mchl_0084 NC_011757.1 77828 78730 R PFAM: restriction endonuclease; KEGG: xcb:XC_3184 Mrr restriction endonuclease; restriction endonuclease complement(77828..78730) Methylobacterium extorquens CM4 7114008 YP_002418969.1 CDS Mchl_0085 NC_011757.1 79024 80214 R KEGG: nha:Nham_4025 hypothetical protein; hypothetical protein complement(79024..80214) Methylobacterium extorquens CM4 7114009 YP_002418970.1 CDS Mchl_0086 NC_011757.1 80614 81936 R PFAM: integrase family protein; KEGG: mex:Mext_0101 integrase family protein; integrase family protein complement(80614..81936) Methylobacterium extorquens CM4 7114010 YP_002418971.1 CDS Mchl_0087 NC_011757.1 82275 83273 R PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_0102 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(82275..83273) Methylobacterium extorquens CM4 7114011 YP_002418972.1 CDS Mchl_0088 NC_011757.1 83582 83803 D KEGG: mex:Mext_0103 hypothetical protein; hypothetical protein 83582..83803 Methylobacterium extorquens CM4 7114012 YP_002418973.1 CDS Mchl_0089 NC_011757.1 84326 85264 R PFAM: homocysteine S-methyltransferase; KEGG: amr:AM1_0903 homocysteine S-methyltransferase; homocysteine S-methyltransferase complement(84326..85264) Methylobacterium extorquens CM4 7114013 YP_002418974.1 CDS Mchl_0091 NC_011757.1 85733 86107 R PFAM: response regulator receiver; KEGG: met:M446_6212 response regulator receiver protein; response regulator receiver protein complement(85733..86107) Methylobacterium extorquens CM4 7114015 YP_002418975.1 CDS Mchl_0093 NC_011757.1 86874 87817 D KEGG: met:M446_6905 insertion sequence transposase protein; transposase join(86874..87215,87215..87817) Methylobacterium extorquens CM4 7114017 YP_002418976.1 CDS Mchl_0094 NC_011757.1 87837 88613 R KEGG: mpo:Mpop_2180 hypothetical protein; hypothetical protein complement(87837..88613) Methylobacterium extorquens CM4 7114018 YP_002418977.1 CDS Mchl_0095 NC_011757.1 88687 89049 R KEGG: mex:Mext_0493 hypothetical protein; hypothetical protein complement(88687..89049) Methylobacterium extorquens CM4 7114019 YP_002418978.1 CDS Mchl_0096 NC_011757.1 89405 89905 D KEGG: mex:Mext_0110 hypothetical protein; hypothetical protein 89405..89905 Methylobacterium extorquens CM4 7114020 YP_002418979.1 CDS Mchl_0097 NC_011757.1 90422 91237 D PFAM: UspA domain protein; KEGG: mex:Mext_0489 UspA domain-containing protein; UspA domain-containing protein 90422..91237 Methylobacterium extorquens CM4 7114021 YP_002418980.1 CDS Mchl_0098 NC_011757.1 91299 91457 R KEGG: bxe:Bxe_B2278 hypothetical protein; hypothetical protein complement(91299..91457) Methylobacterium extorquens CM4 7114022 YP_002418981.1 CDS Mchl_0099 NC_011757.1 91562 91825 R KEGG: mex:Mext_0766 hypothetical protein; hypothetical protein complement(91562..91825) Methylobacterium extorquens CM4 7114023 YP_002418982.1 CDS Mchl_0100 NC_011757.1 92145 92657 D KEGG: mpo:Mpop_3826 hypothetical protein; hypothetical protein 92145..92657 Methylobacterium extorquens CM4 7114024 YP_002418983.1 CDS Mchl_0101 NC_011757.1 92706 92912 R KEGG: mpo:Mpop_4881 hypothetical protein; hypothetical protein complement(92706..92912) Methylobacterium extorquens CM4 7114025 YP_002418984.1 CDS Mchl_0102 NC_011757.1 93537 93776 D KEGG: hypothetical protein; hypothetical protein 93537..93776 Methylobacterium extorquens CM4 7114026 YP_002418985.1 CDS Mchl_0103 NC_011757.1 95019 95285 R KEGG: mex:Mext_2419 hypothetical protein; hypothetical protein complement(95019..95285) Methylobacterium extorquens CM4 7114028 YP_002418986.1 CDS Mchl_0106 NC_011757.1 96287 96439 R hypothetical protein complement(96287..96439) Methylobacterium extorquens CM4 7114031 YP_002418987.1 CDS Mchl_0107 NC_011757.1 96893 97009 D hypothetical protein 96893..97009 Methylobacterium extorquens CM4 7114032 YP_002418988.1 CDS Mchl_0108 NC_011757.1 97281 104309 R PFAM: Hemolysin-type calcium-binding region; Animal haem peroxidase; KEGG: rpe:RPE_1007 heme peroxidase; heme peroxidase complement(97281..104309) Methylobacterium extorquens CM4 7114033 YP_002418989.1 CDS Mchl_0109 NC_011757.1 104722 105057 D KEGG: mrd:Mrad2831_3884 hypothetical protein; hypothetical protein 104722..105057 Methylobacterium extorquens CM4 7114034 YP_002418990.1 CDS Mchl_0110 NC_011757.1 105054 105320 D KEGG: mpo:Mpop_4259 hypothetical protein; hypothetical protein 105054..105320 Methylobacterium extorquens CM4 7114035 YP_002418991.1 CDS Mchl_0113 NC_011757.1 106596 108290 D PFAM: acyltransferase 3; KEGG: bid:Bind_1595 acyltransferase 3; acyltransferase 3 106596..108290 Methylobacterium extorquens CM4 7114038 YP_002418992.1 CDS Mchl_0114 NC_011757.1 108484 108855 D KEGG: mrd:Mrad2831_6451 hypothetical protein; hypothetical protein 108484..108855 Methylobacterium extorquens CM4 7114039 YP_002418993.1 CDS Mchl_0115 NC_011757.1 109025 110029 D PFAM: peptidase M23; KEGG: swi:Swit_4002 peptidase M23B; peptidase M23 109025..110029 Methylobacterium extorquens CM4 7114040 YP_002418994.1 CDS Mchl_0116 NC_011757.1 110042 111049 R KEGG: bce:BC4487 superfamily I DNA/RNA helicase; hypothetical protein complement(110042..111049) Methylobacterium extorquens CM4 7114041 YP_002418995.1 CDS Mchl_0117 NC_011757.1 111214 112536 R PFAM: integrase family protein; KEGG: mex:Mext_0101 integrase family protein; integrase family protein complement(111214..112536) Methylobacterium extorquens CM4 7114042 YP_002418996.1 CDS Mchl_0118 NC_011757.1 112922 114163 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(112922..114163) Methylobacterium extorquens CM4 7114044 YP_002418997.1 CDS Mchl_0119 NC_011757.1 114286 114933 R PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: mex:Mext_0177 phosphoribosylanthranilate isomerase; phosphoribosylanthranilate isomerase complement(114286..114933) Methylobacterium extorquens CM4 7114045 YP_002418998.1 CDS Mchl_0120 NC_011757.1 114950 115318 R KEGG: mex:Mext_0178 hypothetical protein; hypothetical protein complement(114950..115318) Methylobacterium extorquens CM4 7114046 YP_002418999.1 CDS Mchl_0121 NC_011757.1 115544 115852 R TIGRFAM: integration host factor subunit beta; PFAM: histone family protein DNA-binding protein; KEGG: mex:Mext_0179 integration host factor subunit beta; integration host factor subunit beta complement(115544..115852) Methylobacterium extorquens CM4 7114047 YP_002419000.1 CDS Mchl_0122 NC_011757.1 115894 116859 R TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: mex:Mext_0180 signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 36K type complement(115894..116859) Methylobacterium extorquens CM4 7114048 YP_002419001.1 CDS Mchl_0123 NC_011757.1 117120 118445 R KEGG: mex:Mext_0181 hypothetical protein; hypothetical protein complement(117120..118445) Methylobacterium extorquens CM4 7114049 YP_002419002.1 CDS rpsA NC_011757.1 118538 120250 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(118538..120250) Methylobacterium extorquens CM4 7114050 YP_002419003.1 CDS Mchl_0125 NC_011757.1 120665 121471 R TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: mex:Mext_0183 RNA methyltransferase; TrmH family RNA methyltransferase complement(120665..121471) Methylobacterium extorquens CM4 7114051 YP_002419004.1 CDS Mchl_0128 NC_011757.1 123036 123974 D PFAM: pirin; KEGG: mex:Mext_0185 pirin domain-containing protein; pirin 123036..123974 Methylobacterium extorquens CM4 7114055 YP_002419005.1 CDS Mchl_0129 NC_011757.1 124077 125843 D TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mex:Mext_0186 potassium efflux system protein; potassium efflux system protein 124077..125843 Methylobacterium extorquens CM4 7114056 YP_002419006.1 CDS Mchl_0130 NC_011757.1 126023 126742 D PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: mex:Mext_0187 cytochrome C biogenesis protein transmembrane region; cytochrome C biogenesis protein transmembrane region 126023..126742 Methylobacterium extorquens CM4 7114057 YP_002419007.1 CDS Mchl_0131 NC_011757.1 126850 127464 D PFAM: HhH-GPD family protein; KEGG: mex:Mext_0188 HhH-GPD family protein; HhH-GPD family protein 126850..127464 Methylobacterium extorquens CM4 7114058 YP_002419008.1 CDS Mchl_0132 NC_011757.1 127470 127727 R KEGG: mex:Mext_0189 hypothetical protein; hypothetical protein complement(127470..127727) Methylobacterium extorquens CM4 7114059 YP_002419009.1 CDS Mchl_0133 NC_011757.1 128055 128273 D KEGG: mex:Mext_0190 hypothetical protein; hypothetical protein 128055..128273 Methylobacterium extorquens CM4 7117043 YP_002419010.1 CDS Mchl_0134 NC_011757.1 128389 130086 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0191 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(128389..130086) Methylobacterium extorquens CM4 7117617 YP_002419011.1 CDS Mchl_0135 NC_011757.1 130470 132092 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_0192 ABC transporter; ABC transporter 130470..132092 Methylobacterium extorquens CM4 7117618 YP_002419012.1 CDS Mchl_0136 NC_011757.1 132100 132456 R KEGG: mex:Mext_0193 hypothetical protein; hypothetical protein complement(132100..132456) Methylobacterium extorquens CM4 7117619 YP_002419013.1 CDS Mchl_0137 NC_011757.1 132466 132705 R KEGG: mex:Mext_0194 hypothetical protein; hypothetical protein complement(132466..132705) Methylobacterium extorquens CM4 7117620 YP_002419014.1 CDS Mchl_0138 NC_011757.1 132916 133560 R KEGG: mex:Mext_0195 hypothetical protein; hypothetical protein complement(132916..133560) Methylobacterium extorquens CM4 7117621 YP_002419015.1 CDS Mchl_0139 NC_011757.1 133571 134206 R KEGG: mex:Mext_0196 hypothetical protein; hypothetical protein complement(133571..134206) Methylobacterium extorquens CM4 7117622 YP_002419016.1 CDS Mchl_0140 NC_011757.1 134307 135296 D KEGG: mex:Mext_0197 hypothetical protein; hypothetical protein 134307..135296 Methylobacterium extorquens CM4 7117623 YP_002419017.1 CDS Mchl_0141 NC_011757.1 135317 136501 R PFAM: glycosyl transferase group 1; KEGG: mex:Mext_0198 glycosyl transferase group 1; group 1 glycosyl transferase complement(135317..136501) Methylobacterium extorquens CM4 7117624 YP_002419018.1 CDS Mchl_0142 NC_011757.1 136501 137541 R PFAM: glycosyl transferase group 1; KEGG: mex:Mext_0199 glycosyl transferase group 1; group 1 glycosyl transferase complement(136501..137541) Methylobacterium extorquens CM4 7117625 YP_002419019.1 CDS Mchl_0143 NC_011757.1 137599 139653 D TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: glycosyl transferase group 1; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: mex:Mext_0200 HAD family hydrolase; HAD-superfamily hydrolase 137599..139653 Methylobacterium extorquens CM4 7117626 YP_002419020.1 CDS Mchl_0144 NC_011757.1 139711 140565 D KEGG: mex:Mext_0201 sugar transferase; sugar transferase 139711..140565 Methylobacterium extorquens CM4 7117627 YP_002419021.1 CDS Mchl_0145 NC_011757.1 140629 141777 D KEGG: mex:Mext_0202 hypothetical protein; hypothetical protein 140629..141777 Methylobacterium extorquens CM4 7117628 YP_002419022.1 CDS Mchl_0146 NC_011757.1 141827 142768 D PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0203 glycosyl transferase; family 2 glycosyl transferase 141827..142768 Methylobacterium extorquens CM4 7117629 YP_002419023.1 CDS Mchl_0147 NC_011757.1 142765 143820 D PFAM: glycosyl transferase group 1; KEGG: mex:Mext_0204 glycosyl transferase group 1; group 1 glycosyl transferase 142765..143820 Methylobacterium extorquens CM4 7117630 YP_002419024.1 CDS Mchl_0148 NC_011757.1 143865 144533 D KEGG: mex:Mext_0205 hypothetical protein; hypothetical protein 143865..144533 Methylobacterium extorquens CM4 7117631 YP_002419025.1 CDS Mchl_0150 NC_011757.1 145220 146329 D PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mex:Mext_0206 metal-dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase 145220..146329 Methylobacterium extorquens CM4 7117633 YP_002419026.1 CDS Mchl_0151 NC_011757.1 146481 149177 D PFAM: ABC transporter; KEGG: mex:Mext_0207 ABC transporter related; ABC transporter 146481..149177 Methylobacterium extorquens CM4 7117634 YP_002419027.1 CDS Mchl_0152 NC_011757.1 149218 150174 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: mex:Mext_0208 ThiJ/PfpI domain-containing protein; AraC family transcriptional regulator complement(149218..150174) Methylobacterium extorquens CM4 7117635 YP_002419028.1 CDS Mchl_0153 NC_011757.1 150302 151090 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_0209 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 150302..151090 Methylobacterium extorquens CM4 7117636 YP_002419029.1 CDS Mchl_0154 NC_011757.1 151283 151729 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_0210 2Fe-2S iron-sulfur cluster binding domain-containing protein; (2Fe-2S)-binding domain-containing protein 151283..151729 Methylobacterium extorquens CM4 7117637 YP_002419030.1 CDS Mchl_0155 NC_011757.1 151740 153998 D PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_0211 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 151740..153998 Methylobacterium extorquens CM4 7117638 YP_002419031.1 CDS Mchl_0156 NC_011757.1 154009 155016 D PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: mex:Mext_0212 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 154009..155016 Methylobacterium extorquens CM4 7117639 YP_002419032.1 CDS Mchl_0157 NC_011757.1 155248 156498 D PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_0213 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 155248..156498 Methylobacterium extorquens CM4 7117640 YP_002419033.1 CDS Mchl_0158 NC_011757.1 156514 157911 D PFAM: FAD linked oxidase; KEGG: mex:Mext_0214 FAD linked oxidase domain-containing protein; FAD linked oxidase 156514..157911 Methylobacterium extorquens CM4 7117641 YP_002419034.1 CDS Mchl_0159 NC_011757.1 158644 159303 D KEGG: mex:Mext_0215 chaperone protein HtpG; chaperone protein HtpG 158644..159303 Methylobacterium extorquens CM4 7117642 YP_002419035.1 CDS Mchl_0160 NC_011757.1 159291 162101 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mex:Mext_0216 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 159291..162101 Methylobacterium extorquens CM4 7117643 YP_002419036.1 CDS Mchl_0161 NC_011757.1 162098 163468 D PFAM: polysulphide reductase NrfD; KEGG: mex:Mext_0217 polysulphide reductase NrfD; polysulfide reductase NrfD 162098..163468 Methylobacterium extorquens CM4 7117644 YP_002419037.1 CDS Mchl_0162 NC_011757.1 163465 163983 D KEGG: mex:Mext_0218 hypothetical protein; hypothetical protein 163465..163983 Methylobacterium extorquens CM4 7117645 YP_002419038.1 CDS Mchl_0163 NC_011757.1 163980 164507 D KEGG: mex:Mext_0219 hypothetical protein; hypothetical protein 163980..164507 Methylobacterium extorquens CM4 7117646 YP_002419039.1 CDS Mchl_0164 NC_011757.1 164504 165460 D KEGG: mex:Mext_0220 hypothetical protein; hypothetical protein 164504..165460 Methylobacterium extorquens CM4 7117647 YP_002419040.1 CDS Mchl_0165 NC_011757.1 165453 165974 D KEGG: mex:Mext_0221 hypothetical protein; hypothetical protein 165453..165974 Methylobacterium extorquens CM4 7117648 YP_002419041.1 CDS Mchl_0166 NC_011757.1 165974 167062 D TIGRFAM: cytochrome C oxidase subunit II; PFAM: cytochrome C oxidase subunit II; cytochrome C class I; KEGG: mex:Mext_0222 cytochrome C oxidase subunit II; cytochrome C oxidase subunit II 165974..167062 Methylobacterium extorquens CM4 7117649 YP_002419042.1 CDS Mchl_0167 NC_011757.1 167094 168785 D KEGG: mex:Mext_0223 cytochrome C oxidase subunit I; TIGRFAM: cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I; cytochrome C oxidase subunit I 167094..168785 Methylobacterium extorquens CM4 7117650 YP_002419043.1 CDS Mchl_0168 NC_011757.1 168782 169471 D PFAM: cytochrome C oxidase subunit III; KEGG: mex:Mext_0224 cytochrome C oxidase subunit III; cytochrome C oxidase subunit III 168782..169471 Methylobacterium extorquens CM4 7117651 YP_002419044.1 CDS Mchl_0169 NC_011757.1 169468 169770 D TIGRFAM: caa(3)-type oxidase subunit IV; KEGG: mex:Mext_0225 caa(3)-type oxidase subunit IV; caa(3)-type oxidase subunit IV 169468..169770 Methylobacterium extorquens CM4 7117652 YP_002419045.1 CDS Mchl_0171 NC_011757.1 170285 170569 R KEGG: mex:Mext_0227 hypothetical protein; hypothetical protein complement(170285..170569) Methylobacterium extorquens CM4 7117654 YP_002419046.1 CDS Mchl_0172 NC_011757.1 170836 171366 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_0228 sigma-70 family RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 170836..171366 Methylobacterium extorquens CM4 7117655 YP_002419047.1 CDS Mchl_0173 NC_011757.1 171369 172136 D KEGG: mex:Mext_0229 hypothetical protein; transmembrane anti-sigma factor 171369..172136 Methylobacterium extorquens CM4 7117656 YP_002419048.1 CDS Mchl_0174 NC_011757.1 172144 173256 D PFAM: catalase; KEGG: mex:Mext_0230 catalase domain-containing protein; catalase 172144..173256 Methylobacterium extorquens CM4 7117657 YP_002419049.1 CDS Mchl_0175 NC_011757.1 173253 173819 D PFAM: cytochrome B561; KEGG: mex:Mext_0231 cytochrome b561; cytochrome B561 173253..173819 Methylobacterium extorquens CM4 7117658 YP_002419050.1 CDS Mchl_0176 NC_011757.1 173875 174096 D hypothetical protein 173875..174096 Methylobacterium extorquens CM4 7117659 YP_002419051.1 CDS Mchl_0177 NC_011757.1 174417 176132 D catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase A 174417..176132 Methylobacterium extorquens CM4 7117660 YP_002419052.1 CDS Mchl_0178 NC_011757.1 176134 176322 D KEGG: mpo:Mpop_0953 hypothetical protein; hypothetical protein 176134..176322 Methylobacterium extorquens CM4 7117661 YP_002419053.1 CDS Mchl_0179 NC_011757.1 176382 178472 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase subunit beta; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mex:Mext_0234 K+-transporting ATPase subunit beta; K+-transporting ATPase subunit beta 176382..178472 Methylobacterium extorquens CM4 7117662 YP_002419054.1 CDS Mchl_0180 NC_011757.1 178496 179101 D one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase C 178496..179101 Methylobacterium extorquens CM4 7117663 YP_002419055.1 CDS Mchl_0181 NC_011757.1 179112 181829 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: mex:Mext_0236 osmosensitive K channel His kinase sensor; osmosensitive K+ channel signal transduction histidine kinase 179112..181829 Methylobacterium extorquens CM4 7117664 YP_002419056.1 CDS Mchl_0182 NC_011757.1 181826 182572 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0237 response regulator receiver; transcriptional regulator 181826..182572 Methylobacterium extorquens CM4 7117665 YP_002419057.1 CDS Mchl_0183 NC_011757.1 182791 183042 R KEGG: mex:Mext_0238 hypothetical protein; hypothetical protein complement(182791..183042) Methylobacterium extorquens CM4 7117666 YP_002419058.1 CDS Mchl_0184 NC_011757.1 183234 184595 D KEGG: mex:Mext_0239 TRAP-type uncharacterized transport system periplasmic component-like protein; TRAP-type transporter periplasmic component-like protein 183234..184595 Methylobacterium extorquens CM4 7117667 YP_002419059.1 CDS Mchl_0186 NC_011757.1 184900 185838 R KEGG: mex:Mext_0240 hypothetical protein; hypothetical protein complement(184900..185838) Methylobacterium extorquens CM4 7117669 YP_002419060.1 CDS Mchl_0187 NC_011757.1 185835 186623 R PFAM: methyltransferase ; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_0241 methyltransferase type 11; type 11 methyltransferase complement(185835..186623) Methylobacterium extorquens CM4 7117670 YP_002419061.1 CDS Mchl_0188 NC_011757.1 186620 187405 R PFAM: phosphoglycerate mutase; KEGG: mex:Mext_0242 phosphoglycerate mutase; phosphoglycerate mutase complement(186620..187405) Methylobacterium extorquens CM4 7117671 YP_002419062.1 CDS Mchl_0189 NC_011757.1 187402 188499 R PFAM: myo-inositol-1-phosphate synthase; myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: mex:Mext_0243 myo-inositol-1-phosphate synthase; myo-inositol-1-phosphate synthase complement(187402..188499) Methylobacterium extorquens CM4 7117672 YP_002419063.1 CDS Mchl_0190 NC_011757.1 188499 189539 R PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_0244 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(188499..189539) Methylobacterium extorquens CM4 7117673 YP_002419064.1 CDS Mchl_0191 NC_011757.1 189551 190666 R KEGG: mex:Mext_0245 hypothetical protein; hypothetical protein complement(189551..190666) Methylobacterium extorquens CM4 7117674 YP_002419065.1 CDS Mchl_0192 NC_011757.1 190663 191769 R KEGG: mex:Mext_0246 hypothetical protein; hypothetical protein complement(190663..191769) Methylobacterium extorquens CM4 7117675 YP_002419066.1 CDS Mchl_0193 NC_011757.1 191766 192893 R KEGG: mex:Mext_0247 hypothetical protein; hypothetical protein complement(191766..192893) Methylobacterium extorquens CM4 7117676 YP_002419067.1 CDS Mchl_0194 NC_011757.1 192890 193996 R PFAM: glycosyl transferase group 1; KEGG: mex:Mext_0248 glycosyl transferase group 1; group 1 glycosyl transferase complement(192890..193996) Methylobacterium extorquens CM4 7117677 YP_002419068.1 CDS Mchl_0195 NC_011757.1 193987 195282 R PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_0249 radical SAM domain-containing protein; radical SAM protein complement(193987..195282) Methylobacterium extorquens CM4 7117678 YP_002419069.1 CDS Mchl_0196 NC_011757.1 195279 196370 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_0250 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(195279..196370) Methylobacterium extorquens CM4 7117679 YP_002419070.1 CDS Mchl_0197 NC_011757.1 196367 197479 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: mex:Mext_0251 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(196367..197479) Methylobacterium extorquens CM4 7117680 YP_002419071.1 CDS Mchl_0200 NC_011757.1 198940 200178 D PFAM: peptidase M16 domain protein; KEGG: mpo:Mpop_2284 peptidase M16 domain protein; peptidase M16 domain-containing protein 198940..200178 Methylobacterium extorquens CM4 7117683 YP_002419072.1 CDS Mchl_0201 NC_011757.1 200298 201404 D PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: met:M446_4177 redoxin domain-containing protein; redoxin 200298..201404 Methylobacterium extorquens CM4 7117684 YP_002419073.1 CDS Mchl_0202 NC_011757.1 201460 201939 D PFAM: lysine exporter (LYSE/YGGA); KEGG: sme:SMc01851 amino acid efflux protein; lysine exporter LysE/YggA 201460..201939 Methylobacterium extorquens CM4 7117685 YP_002419074.1 CDS Mchl_0203 NC_011757.1 202336 203262 R TIGRFAM: arginase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: met:M446_1825 arginase; arginase complement(202336..203262) Methylobacterium extorquens CM4 7117686 YP_002419075.1 CDS Mchl_0204 NC_011757.1 203265 204458 R PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mpo:Mpop_4647 pyridoxal-5'-phosphate-dependent protein beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta complement(203265..204458) Methylobacterium extorquens CM4 7117687 YP_002419076.1 CDS Mchl_0205 NC_011757.1 204455 204871 R PFAM: Secretin/TonB short domain; KEGG: mpo:Mpop_4653 TonB-dependent receptor plug; Secretin/TonB short domain complement(204455..204871) Methylobacterium extorquens CM4 7117688 YP_002419077.1 CDS Mchl_0206 NC_011757.1 205082 206050 R PFAM: FecR protein; KEGG: met:M446_3438 anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR complement(205082..206050) Methylobacterium extorquens CM4 7117689 YP_002419078.1 CDS Mchl_0207 NC_011757.1 206069 206587 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: met:M446_3437 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit complement(206069..206587) Methylobacterium extorquens CM4 7117690 YP_002419079.1 CDS Mchl_0209 NC_011757.1 207983 209938 R PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_3812 hypothetical protein; hypothetical protein complement(207983..209938) Methylobacterium extorquens CM4 7117692 YP_002419080.1 CDS Mchl_0210 NC_011757.1 210118 211620 D KEGG: mex:Mext_3813 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; LuxR family transcriptional regulator 210118..211620 Methylobacterium extorquens CM4 7117693 YP_002419081.1 CDS Mchl_0211 NC_011757.1 211760 211942 D hypothetical protein 211760..211942 Methylobacterium extorquens CM4 7117694 YP_002419082.1 CDS Mchl_0212 NC_011757.1 212044 212304 D PFAM: transglycosylase; KEGG: mex:Mext_3814 transglycosylase; transglycosylase 212044..212304 Methylobacterium extorquens CM4 7117695 YP_002419083.1 CDS Mchl_0213 NC_011757.1 212353 213327 D KEGG: mex:Mext_3815 hypothetical protein; hypothetical protein 212353..213327 Methylobacterium extorquens CM4 7117696 YP_002419084.1 CDS Mchl_0214 NC_011757.1 213324 213815 D KEGG: mex:Mext_3816 hypothetical protein; hypothetical protein 213324..213815 Methylobacterium extorquens CM4 7117697 YP_002419085.1 CDS Mchl_0215 NC_011757.1 213812 214696 D KEGG: mex:Mext_3817 hypothetical protein; hypothetical protein 213812..214696 Methylobacterium extorquens CM4 7118841 YP_002419086.1 CDS Mchl_0217 NC_011757.1 215428 216336 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3801 carbonate dehydratase; LysR family transcriptional regulator complement(215428..216336) Methylobacterium extorquens CM4 7118844 YP_002419087.1 CDS Mchl_0218 NC_011757.1 216431 217312 D PFAM: aldo/keto reductase; KEGG: mex:Mext_3802 aldo/keto reductase; aldo/keto reductase 216431..217312 Methylobacterium extorquens CM4 7118845 YP_002419088.1 CDS Mchl_0219 NC_011757.1 217739 219208 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: mex:Mext_3803 diguanylate cyclase; PAS/PAC and GAF sensor-containing diguanylate cyclase 217739..219208 Methylobacterium extorquens CM4 7118846 YP_002419089.1 CDS Mchl_0220 NC_011757.1 219563 221359 R PFAM: EAL domain protein; GAF domain protein; KEGG: mex:Mext_3804 EAL domain-containing protein; diguanylate phosphodiesterase complement(219563..221359) Methylobacterium extorquens CM4 7118847 YP_002419090.1 CDS Mchl_0221 NC_011757.1 221756 222064 R KEGG: mex:Mext_3805 hypothetical protein; hypothetical protein complement(221756..222064) Methylobacterium extorquens CM4 7118848 YP_002419091.1 CDS Mchl_0222 NC_011757.1 222275 223318 D PFAM: regulatory protein LysR; KEGG: mex:Mext_3806 regulatory protein LysR; transcriptional regulator of molybdate metabolism, LysR family 222275..223318 Methylobacterium extorquens CM4 7118849 YP_002419092.1 CDS Mchl_0223 NC_011757.1 223857 224921 D KEGG: mex:Mext_3807 hypothetical protein; hypothetical protein 223857..224921 Methylobacterium extorquens CM4 7118850 YP_002419093.1 CDS Mchl_0224 NC_011757.1 224967 226070 D KEGG: mex:Mext_3808 hypothetical protein; hypothetical protein 224967..226070 Methylobacterium extorquens CM4 7118851 YP_002419094.1 CDS Mchl_0225 NC_011757.1 226183 226806 R KEGG: mrd:Mrad2831_4845 hypothetical protein; hypothetical protein complement(226183..226806) Methylobacterium extorquens CM4 7118852 YP_002419095.1 CDS Mchl_0226 NC_011757.1 227015 227473 R hypothetical protein complement(227015..227473) Methylobacterium extorquens CM4 7118853 YP_002419096.1 CDS Mchl_0227 NC_011757.1 227550 227810 R KEGG: mex:Mext_3810 hypothetical protein; hypothetical protein complement(227550..227810) Methylobacterium extorquens CM4 7118854 YP_002419097.1 CDS Mchl_0228 NC_011757.1 227934 228380 R KEGG: mex:Mext_3359 hypothetical protein; hypothetical protein complement(227934..228380) Methylobacterium extorquens CM4 7118855 YP_002419098.1 CDS Mchl_0229 NC_011757.1 228465 228668 R KEGG: mex:Mext_3360 hypothetical protein; hypothetical protein complement(228465..228668) Methylobacterium extorquens CM4 7118856 YP_002419099.1 CDS Mchl_0230 NC_011757.1 228707 229051 R KEGG: mex:Mext_3361 hypothetical protein; hypothetical protein complement(228707..229051) Methylobacterium extorquens CM4 7118857 YP_002419100.1 CDS Mchl_0231 NC_011757.1 229097 229399 R KEGG: mrd:Mrad2831_4908 hypothetical protein; hypothetical protein complement(229097..229399) Methylobacterium extorquens CM4 7118858 YP_002419101.1 CDS Mchl_0234 NC_011757.1 231053 232048 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rpc:RPC_2016 AraC family transcriptional regulator; AraC family transcriptional regulator complement(231053..232048) Methylobacterium extorquens CM4 7118861 YP_002419102.1 CDS Mchl_0235 NC_011757.1 232097 232654 R PFAM: type IV pilus assembly PilZ; KEGG: met:M446_4427 type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(232097..232654) Methylobacterium extorquens CM4 7118862 YP_002419103.1 CDS Mchl_0236 NC_011757.1 232654 233535 R KEGG: mva:Mvan_3112 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(232654..233535) Methylobacterium extorquens CM4 7118863 YP_002419104.1 CDS Mchl_0237 NC_011757.1 233537 234532 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rpc:RPC_2016 AraC family transcriptional regulator; AraC family transcriptional regulator complement(233537..234532) Methylobacterium extorquens CM4 7118864 YP_002419105.1 CDS Mchl_0238 NC_011757.1 234827 236125 D KEGG: mpo:Mpop_1194 conserved hypothetical protein; flagellin C-ter domain; hypothetical protein 234827..236125 Methylobacterium extorquens CM4 7118865 YP_002419106.1 CDS Mchl_0239 NC_011757.1 236306 236659 D KEGG: mag:amb0529 hypothetical protein; hypothetical protein 236306..236659 Methylobacterium extorquens CM4 7118866 YP_002419107.1 CDS Mchl_0240 NC_011757.1 236677 237588 D KEGG: rpt:Rpal_2114 hypothetical protein; hypothetical protein 236677..237588 Methylobacterium extorquens CM4 7118867 YP_002419108.1 CDS Mchl_0241 NC_011757.1 237619 238128 D hypothetical protein 237619..238128 Methylobacterium extorquens CM4 7118868 YP_002419109.1 CDS Mchl_0242 NC_011757.1 238298 240046 D PFAM: flagellin domain protein; KEGG: met:M446_5135 flagellin domain-containing protein; flagellin domain-containing protein 238298..240046 Methylobacterium extorquens CM4 7118869 YP_002419110.1 CDS Mchl_0243 NC_011757.1 240257 241786 R PFAM: integrase family protein; KEGG: rpe:RPE_0558 phage integrase family protein; integrase family protein complement(240257..241786) Methylobacterium extorquens CM4 7118870 YP_002419111.1 CDS Mchl_0244 NC_011757.1 242065 243291 D PFAM: integrase family protein; KEGG: mrd:Mrad2831_5749 integrase family protein; integrase family protein 242065..243291 Methylobacterium extorquens CM4 7118871 YP_002419112.1 CDS Mchl_0245 NC_011757.1 243213 243455 R PFAM: regulatory protein MerR; Prophage CP4-57 regulatory; KEGG: mpo:Mpop_1340 DNA binding domain protein, excisionase family; prophage CP4-57 regulator complement(243213..243455) Methylobacterium extorquens CM4 7118872 YP_002419113.1 CDS Mchl_0246 NC_011757.1 243571 243789 D KEGG: mpo:Mpop_5395 hypothetical protein; hypothetical protein 243571..243789 Methylobacterium extorquens CM4 7118873 YP_002419114.1 CDS Mchl_0247 NC_011757.1 244015 244194 D hypothetical protein 244015..244194 Methylobacterium extorquens CM4 7118874 YP_002419115.1 CDS Mchl_0248 NC_011757.1 244227 244442 R hypothetical protein complement(244227..244442) Methylobacterium extorquens CM4 7118875 YP_002419116.1 CDS Mchl_0249 NC_011757.1 244426 245298 R PFAM: phosphoadenosine phosphosulfate reductase; KEGG: mag:amb1159 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase/FAD synthetase and related enzyme; phosphoadenosine phosphosulfate reductase complement(244426..245298) Methylobacterium extorquens CM4 7118876 YP_002419117.1 CDS Mchl_0250 NC_011757.1 245322 245717 R KEGG: mpo:Mpop_2730 hypothetical protein; hypothetical protein complement(245322..245717) Methylobacterium extorquens CM4 7118877 YP_002419118.1 CDS Mchl_0251 NC_011757.1 245711 246061 R PFAM: helix-turn-helix domain protein; KEGG: nfa:nfa22390 transcriptional regulator; XRE family transcriptional regulator complement(245711..246061) Methylobacterium extorquens CM4 7118878 YP_002419119.1 CDS Mchl_0252 NC_011757.1 246065 246496 R KEGG: mrd:Mrad2831_1232 HNH nuclease; hypothetical protein complement(246065..246496) Methylobacterium extorquens CM4 7118879 YP_002419120.1 CDS Mchl_0253 NC_011757.1 246493 246702 R hypothetical protein complement(246493..246702) Methylobacterium extorquens CM4 7118880 YP_002419121.1 CDS Mchl_0254 NC_011757.1 246699 246995 R hypothetical protein complement(246699..246995) Methylobacterium extorquens CM4 7118881 YP_002419122.1 CDS Mchl_0255 NC_011757.1 246997 247278 R KEGG: UCP2; uncoupling protein; hypothetical protein complement(246997..247278) Methylobacterium extorquens CM4 7118882 YP_002419123.1 CDS Mchl_0256 NC_011757.1 247285 247803 R hypothetical protein complement(247285..247803) Methylobacterium extorquens CM4 7118883 YP_002419124.1 CDS Mchl_0257 NC_011757.1 247870 248310 R KEGG: met:M446_0951 hypothetical protein; hypothetical protein complement(247870..248310) Methylobacterium extorquens CM4 7118884 YP_002419125.1 CDS Mchl_0258 NC_011757.1 248747 249439 R PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: gbe:GbCGDNIH1_1593 transcriptional repressor; phage repressor complement(248747..249439) Methylobacterium extorquens CM4 7118885 YP_002419126.1 CDS Mchl_0259 NC_011757.1 249528 249776 D KEGG: ecp:ECP_1147 hypothetical protein; hypothetical protein 249528..249776 Methylobacterium extorquens CM4 7118886 YP_002419127.1 CDS Mchl_0260 NC_011757.1 249784 249933 D hypothetical protein 249784..249933 Methylobacterium extorquens CM4 7118887 YP_002419128.1 CDS Mchl_0261 NC_011757.1 249972 250244 R hypothetical protein complement(249972..250244) Methylobacterium extorquens CM4 7118888 YP_002419129.1 CDS Mchl_0262 NC_011757.1 250430 250678 R hypothetical protein complement(250430..250678) Methylobacterium extorquens CM4 7118889 YP_002419130.1 CDS Mchl_0263 NC_011757.1 250900 251322 D KEGG: mrd:Mrad2831_5725 hypothetical protein; hypothetical protein 250900..251322 Methylobacterium extorquens CM4 7118890 YP_002419131.1 CDS Mchl_0264 NC_011757.1 251409 251972 D PFAM: endodeoxyribonuclease RusA; KEGG: mex:Mext_2442 hypothetical protein; endodeoxyribonuclease RusA 251409..251972 Methylobacterium extorquens CM4 7118891 YP_002419132.1 CDS Mchl_0265 NC_011757.1 251969 252175 D hypothetical protein 251969..252175 Methylobacterium extorquens CM4 7118892 YP_002419133.1 CDS Mchl_0266 NC_011757.1 252172 252399 D hypothetical protein 252172..252399 Methylobacterium extorquens CM4 7118893 YP_002419134.1 CDS Mchl_0268 NC_011757.1 253192 253950 D KEGG: mrd:Mrad2831_5718 hypothetical protein; hypothetical protein 253192..253950 Methylobacterium extorquens CM4 7118895 YP_002419135.1 CDS Mchl_0269 NC_011757.1 253947 254333 D KEGG: sth:STH2761 NrdR family transcriptional regulator; hypothetical protein 253947..254333 Methylobacterium extorquens CM4 7118896 YP_002419136.1 CDS Mchl_0270 NC_011757.1 254501 254962 D PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_2438 ROSMUCR transcriptional regulator; MucR family transcriptional regulator 254501..254962 Methylobacterium extorquens CM4 7118897 YP_002419137.1 CDS Mchl_0271 NC_011757.1 255070 255783 D hypothetical protein 255070..255783 Methylobacterium extorquens CM4 7118898 YP_002419138.1 CDS Mchl_0272 NC_011757.1 255988 258288 R KEGG: met:M446_2057 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; MHYT domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase complement(255988..258288) Methylobacterium extorquens CM4 7118899 YP_002419139.1 CDS Mchl_0273 NC_011757.1 258518 258781 R KEGG: mrd:Mrad2831_0291 hypothetical protein; hypothetical protein complement(258518..258781) Methylobacterium extorquens CM4 7118900 YP_002419140.1 CDS Mchl_0274 NC_011757.1 258869 259117 D KEGG: mex:Mext_0103 hypothetical protein; hypothetical protein 258869..259117 Methylobacterium extorquens CM4 7118901 YP_002419141.1 CDS Mchl_0275 NC_011757.1 259252 259470 D KEGG: mrd:Mrad2831_5940 hypothetical protein; hypothetical protein 259252..259470 Methylobacterium extorquens CM4 7118902 YP_002419142.1 CDS Mchl_0276 NC_011757.1 259791 259931 R KEGG: mpo:Mpop_2771 hypothetical protein; hypothetical protein complement(259791..259931) Methylobacterium extorquens CM4 7118903 YP_002419143.1 CDS Mchl_0277 NC_011757.1 260015 260167 D hypothetical protein 260015..260167 Methylobacterium extorquens CM4 7118904 YP_002419144.1 CDS Mchl_0278 NC_011757.1 260293 260931 D KEGG: bph:Bphy_1890 hypothetical protein; hypothetical protein 260293..260931 Methylobacterium extorquens CM4 7118905 YP_002419145.1 CDS Mchl_0279 NC_011757.1 260876 262954 D PFAM: terminase GpA; KEGG: ecx:EcHS_A2094 phage terminase large subunit (GpA); terminase GpA 260876..262954 Methylobacterium extorquens CM4 7118906 YP_002419146.1 CDS Mchl_0280 NC_011757.1 262958 263212 D hypothetical protein 262958..263212 Methylobacterium extorquens CM4 7118907 YP_002419147.1 CDS Mchl_0281 NC_011757.1 263215 264834 D TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; KEGG: rso:RSc0857 bacteriophage-like protein; phage portal protein, lambda family 263215..264834 Methylobacterium extorquens CM4 7118908 YP_002419148.1 CDS Mchl_0282 NC_011757.1 264831 265730 D PFAM: peptidase S49; KEGG: rsq:Rsph17025_1752 peptidase S49; peptidase S49 264831..265730 Methylobacterium extorquens CM4 7118909 YP_002419149.1 CDS Mchl_0283 NC_011757.1 265810 266394 D KEGG: mucin-associated surface protein (MASP); hypothetical protein 265810..266394 Methylobacterium extorquens CM4 7118910 YP_002419150.1 CDS Mchl_0284 NC_011757.1 266397 266777 D KEGG: rso:RSc0859 bacteriophage-like protein; bacteriophage-like protein 266397..266777 Methylobacterium extorquens CM4 7118911 YP_002419151.1 CDS Mchl_0285 NC_011757.1 266781 267836 D KEGG: rso:RSc0860 bacteriophage-like protein; bacteriophage-like protein 266781..267836 Methylobacterium extorquens CM4 7118912 YP_002419152.1 CDS Mchl_0286 NC_011757.1 267923 268201 D hypothetical protein 267923..268201 Methylobacterium extorquens CM4 7118913 YP_002419153.1 CDS Mchl_0287 NC_011757.1 268198 268563 D KEGG: nwi:Nwi_0805 hypothetical protein; hypothetical protein 268198..268563 Methylobacterium extorquens CM4 7118914 YP_002419154.1 CDS Mchl_0288 NC_011757.1 268560 269225 D KEGG: nwi:Nwi_0802 hypothetical protein; hypothetical protein 268560..269225 Methylobacterium extorquens CM4 7118915 YP_002419155.1 CDS Mchl_0289 NC_011757.1 269225 269659 D KEGG: nwi:Nwi_0801 hypothetical protein; hypothetical protein 269225..269659 Methylobacterium extorquens CM4 7118916 YP_002419156.1 CDS Mchl_0290 NC_011757.1 269684 270625 D KEGG: nwi:Nwi_0800 hypothetical protein; hypothetical protein 269684..270625 Methylobacterium extorquens CM4 7118917 YP_002419157.1 CDS Mchl_0291 NC_011757.1 270853 271272 D KEGG: nwi:Nwi_0799 hypothetical protein; hypothetical protein 270853..271272 Methylobacterium extorquens CM4 7118918 YP_002419158.1 CDS Mchl_0292 NC_011757.1 271326 271523 D KEGG: nwi:Nwi_0798 hypothetical protein; hypothetical protein 271326..271523 Methylobacterium extorquens CM4 7118919 YP_002419159.1 CDS Mchl_0293 NC_011757.1 271513 275007 D KEGG: nwi:Nwi_0797 phage-related minor tail protein; hypothetical protein 271513..275007 Methylobacterium extorquens CM4 7118920 YP_002419160.1 CDS Mchl_0294 NC_011757.1 275011 275385 D KEGG: mpo:Mpop_2674 hypothetical protein; hypothetical protein 275011..275385 Methylobacterium extorquens CM4 7118921 YP_002419161.1 CDS Mchl_0295 NC_011757.1 275390 275938 D PFAM: Domain of unknown function DUF1833; KEGG: mag:amb0393 hypothetical protein; hypothetical protein 275390..275938 Methylobacterium extorquens CM4 7118922 YP_002419162.1 CDS Mchl_0296 NC_011757.1 275935 276333 D KEGG: mex:Mext_3535 NLP/P60 protein; NLP/P60 protein 275935..276333 Methylobacterium extorquens CM4 7118923 YP_002419163.1 CDS Mchl_0297 NC_011757.1 276361 276723 R KEGG: mex:Mext_3537 hypothetical protein; hypothetical protein complement(276361..276723) Methylobacterium extorquens CM4 7117044 YP_002419164.1 CDS Mchl_0298 NC_011757.1 276953 281665 D KEGG: mex:Mext_3534 hypothetical protein; hypothetical protein 276953..281665 Methylobacterium extorquens CM4 7118596 YP_002419165.1 CDS Mchl_0299 NC_011757.1 281741 283072 D KEGG: mrd:Mrad2831_4981 hypothetical protein; hypothetical protein 281741..283072 Methylobacterium extorquens CM4 7118597 YP_002419166.1 CDS Mchl_0300 NC_011757.1 283072 283656 D KEGG: azc:AZC_2161 hypothetical protein; hypothetical protein 283072..283656 Methylobacterium extorquens CM4 7118598 YP_002419167.1 CDS Mchl_0301 NC_011757.1 283667 283963 D hypothetical protein 283667..283963 Methylobacterium extorquens CM4 7118599 YP_002419168.1 CDS Mchl_0302 NC_011757.1 284057 284413 R KEGG: mpo:Mpop_3138 hypothetical protein; hypothetical protein complement(284057..284413) Methylobacterium extorquens CM4 7118600 YP_002419169.1 CDS Mchl_0303 NC_011757.1 284581 285279 D PFAM: peptidoglycan-binding protein; KEGG: mex:Mext_4383 peptidoglycan binding domain-containing protein; peptidoglycan-binding protein 284581..285279 Methylobacterium extorquens CM4 7118601 YP_002419170.1 CDS Mchl_0304 NC_011757.1 285913 286476 D KEGG: mex:Mext_4382 hypothetical protein; hypothetical protein 285913..286476 Methylobacterium extorquens CM4 7118602 YP_002419171.1 CDS Mchl_0305 NC_011757.1 286490 287014 D KEGG: xau:Xaut_3728 hypothetical protein; hypothetical protein 286490..287014 Methylobacterium extorquens CM4 7118603 YP_002419172.1 CDS Mchl_0306 NC_011757.1 287014 287382 D hypothetical protein 287014..287382 Methylobacterium extorquens CM4 7118604 YP_002419173.1 CDS Mchl_0307 NC_011757.1 287382 287567 D KEGG: mpo:Mpop_3761 hypothetical protein; hypothetical protein 287382..287567 Methylobacterium extorquens CM4 7118605 YP_002419174.1 CDS Mchl_0308 NC_011757.1 287651 289276 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mrd:Mrad2831_2428 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 287651..289276 Methylobacterium extorquens CM4 7118606 YP_002419175.1 CDS Mchl_0309 NC_011757.1 289497 291206 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rpc:RPC_1770 cytidine/deoxycytidylate deaminase, zinc-binding region; zinc-binding CMP/dCMP deaminase complement(289497..291206) Methylobacterium extorquens CM4 7118607 YP_002419176.1 CDS Mchl_0310 NC_011757.1 291310 291483 D hypothetical protein 291310..291483 Methylobacterium extorquens CM4 7118608 YP_002419177.1 CDS Mchl_0311 NC_011757.1 291544 291663 R hypothetical protein complement(291544..291663) Methylobacterium extorquens CM4 7118609 YP_002419178.1 CDS Mchl_0312 NC_011757.1 291676 291918 R KEGG: mex:Mext_0359 hypothetical protein; hypothetical protein complement(291676..291918) Methylobacterium extorquens CM4 7118610 YP_002419179.1 CDS Mchl_0313 NC_011757.1 291921 292175 R KEGG: mex:Mext_0360 hypothetical protein; hypothetical protein complement(291921..292175) Methylobacterium extorquens CM4 7118611 YP_002419180.1 CDS Mchl_0314 NC_011757.1 292315 292770 D PFAM: peptidase S24 and S26 domain protein; KEGG: mex:Mext_0361 peptidase S24/S26 domain-containing protein; peptidase S24 and S26 domain-containing protein 292315..292770 Methylobacterium extorquens CM4 7118612 YP_002419181.1 CDS Mchl_0315 NC_011757.1 292767 294098 D PFAM: UMUC domain protein DNA-repair protein; KEGG: mex:Mext_3517 DNA-directed DNA polymerase; DNA-directed DNA polymerase 292767..294098 Methylobacterium extorquens CM4 7118613 YP_002419182.1 CDS Mchl_0317 NC_011757.1 295697 296380 R PFAM: nuclease (SNase domain protein); KEGG: mex:Mext_0111 nuclease; nuclease complement(295697..296380) Methylobacterium extorquens CM4 7118615 YP_002419183.1 CDS Mchl_0318 NC_011757.1 296675 296941 R KEGG: mpo:Mpop_4259 hypothetical protein; hypothetical protein complement(296675..296941) Methylobacterium extorquens CM4 7118616 YP_002419184.1 CDS Mchl_0319 NC_011757.1 297241 298563 D PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: mex:Mext_0275 recombination factor protein RarA; recombination factor protein RarA 297241..298563 Methylobacterium extorquens CM4 7118618 YP_002419185.1 CDS Mchl_0320 NC_011757.1 298599 300092 D PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: mex:Mext_0276 carboxypeptidase Taq; carboxypeptidase Taq 298599..300092 Methylobacterium extorquens CM4 7118619 YP_002419186.1 CDS Mchl_0321 NC_011757.1 300255 301502 D KEGG: mex:Mext_0277 molecular chaperone, HSP70 class; molecular chaperone, HSP70 class 300255..301502 Methylobacterium extorquens CM4 7118620 YP_002419187.1 CDS Mchl_0322 NC_011757.1 301730 303136 D KEGG: mex:Mext_0278 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; pseudouridine synthase 301730..303136 Methylobacterium extorquens CM4 7118621 YP_002419188.1 CDS Mchl_0323 NC_011757.1 303781 304482 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_0280 HAD family hydrolase; HAD-superfamily hydrolase 303781..304482 Methylobacterium extorquens CM4 7118622 YP_002419189.1 CDS Mchl_0324 NC_011757.1 304543 305346 D PFAM: ATP12 ATPase; KEGG: mex:Mext_0281 ATP12 ATPase; ATP12 ATPase 304543..305346 Methylobacterium extorquens CM4 7118623 YP_002419190.1 CDS Mchl_0325 NC_011757.1 305518 305655 D hypothetical protein 305518..305655 Methylobacterium extorquens CM4 7118624 YP_002419191.1 CDS Mchl_0326 NC_011757.1 305940 307472 D PFAM: carboxyl transferase; KEGG: mex:Mext_0282 carboxyl transferase; carboxyl transferase 305940..307472 Methylobacterium extorquens CM4 7118625 YP_002419192.1 CDS Mchl_0327 NC_011757.1 307534 308088 R KEGG: mex:Mext_0283 hypothetical protein; hypothetical protein complement(307534..308088) Methylobacterium extorquens CM4 7118626 YP_002419193.1 CDS Mchl_0328 NC_011757.1 308525 309172 D PFAM: regulatory protein TetR; KEGG: mex:Mext_0284 regulatory protein TetR; TetR family transcriptional regulator 308525..309172 Methylobacterium extorquens CM4 7118628 YP_002419194.1 CDS Mchl_0329 NC_011757.1 309206 310225 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 309206..310225 Methylobacterium extorquens CM4 7118629 YP_002419195.1 CDS Mchl_0330 NC_011757.1 310393 311046 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_0286 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 310393..311046 Methylobacterium extorquens CM4 7118630 YP_002419196.1 CDS Mchl_0331 NC_011757.1 311158 311982 D KEGG: mex:Mext_0287 hypothetical protein; hypothetical protein 311158..311982 Methylobacterium extorquens CM4 7118631 YP_002419197.1 CDS Mchl_0332 NC_011757.1 312055 313353 R TIGRFAM: crotonyl-CoA reductase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_0288 crotonyl-CoA reductase; crotonyl-CoA reductase complement(312055..313353) Methylobacterium extorquens CM4 7118632 YP_002419198.1 CDS Mchl_0333 NC_011757.1 313534 315006 R PFAM: catalase; KEGG: mex:Mext_0289 catalase; catalase complement(313534..315006) Methylobacterium extorquens CM4 7118633 YP_002419199.1 CDS Mchl_0334 NC_011757.1 315373 317439 D KEGG: mex:Mext_0290 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; methylmalonyl-CoA mutase, large subunit 315373..317439 Methylobacterium extorquens CM4 7118634 YP_002419200.1 CDS Mchl_0335 NC_011757.1 317549 318235 R KEGG: mex:Mext_0291 hypothetical protein; hypothetical protein complement(317549..318235) Methylobacterium extorquens CM4 7118635 YP_002419201.1 CDS Mchl_0336 NC_011757.1 318532 319278 R PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: mex:Mext_0292 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(318532..319278) Methylobacterium extorquens CM4 7118636 YP_002419202.1 CDS Mchl_0337 NC_011757.1 319387 319716 D SMART: regulatory protein ArsR; KEGG: mex:Mext_0293 regulatory protein ArsR; regulatory protein ArsR 319387..319716 Methylobacterium extorquens CM4 7118637 YP_002419203.1 CDS Mchl_0338 NC_011757.1 319868 320929 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 319868..320929 Methylobacterium extorquens CM4 7118638 YP_002419204.1 CDS Mchl_0339 NC_011757.1 321045 321218 R KEGG: mex:Mext_0295 hypothetical protein; hypothetical protein complement(321045..321218) Methylobacterium extorquens CM4 7118639 YP_002419205.1 CDS leuD NC_011757.1 321391 321996 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 321391..321996 Methylobacterium extorquens CM4 7118640 YP_002419206.1 CDS Mchl_0341 NC_011757.1 322004 322621 R PFAM: peptidase C15 pyroglutamyl peptidase I; KEGG: mex:Mext_0297 peptidase C15 pyroglutamyl peptidase I; peptidase C15 pyroglutamyl peptidase I complement(322004..322621) Methylobacterium extorquens CM4 7118641 YP_002419207.1 CDS Mchl_0342 NC_011757.1 322618 323607 R functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transporters, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transporter ATPase complement(322618..323607) Methylobacterium extorquens CM4 7118642 YP_002419208.1 CDS Mchl_0343 NC_011757.1 323754 324788 D PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: mex:Mext_0299 protein of unknown function DUF900 hydrolase family protein; hypothetical protein 323754..324788 Methylobacterium extorquens CM4 7118643 YP_002419209.1 CDS Mchl_0344 NC_011757.1 324974 325321 D KEGG: mex:Mext_0300 hypothetical protein; hypothetical protein 324974..325321 Methylobacterium extorquens CM4 7118644 YP_002419210.1 CDS Mchl_0345 NC_011757.1 325399 327279 R PFAM: peptidase S15; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: mex:Mext_0301 peptidase S9 prolyl oligopeptidase; peptidase S9 prolyl oligopeptidase active site domain-containing protein complement(325399..327279) Methylobacterium extorquens CM4 7118645 YP_002419211.1 CDS Mchl_0346 NC_011757.1 327348 328265 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_0302 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(327348..328265) Methylobacterium extorquens CM4 7118646 YP_002419212.1 CDS Mchl_0347 NC_011757.1 328607 328861 D KEGG: mex:Mext_0303 hypothetical protein; hypothetical protein 328607..328861 Methylobacterium extorquens CM4 7118647 YP_002419213.1 CDS Mchl_0348 NC_011757.1 328993 330240 D TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: mex:Mext_0304 nuclease SbcCD, D subunit; nuclease SbcCD subunit D 328993..330240 Methylobacterium extorquens CM4 7118648 YP_002419214.1 CDS Mchl_0349 NC_011757.1 330252 333998 D PFAM: SMC domain protein; KEGG: mex:Mext_0305 SMC domain-containing protein; SMC domain-containing protein 330252..333998 Methylobacterium extorquens CM4 7118649 YP_002419215.1 CDS Mchl_0350 NC_011757.1 334260 335519 D PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_0306 major facilitator transporter; major facilitator superfamily protein 334260..335519 Methylobacterium extorquens CM4 7118650 YP_002419216.1 CDS Mchl_0351 NC_011757.1 335602 336369 R KEGG: mex:Mext_0307 competence protein F; competence protein F complement(335602..336369) Methylobacterium extorquens CM4 7118651 YP_002419217.1 CDS Mchl_0352 NC_011757.1 336456 336626 R KEGG: mex:Mext_0308 hypothetical protein; hypothetical protein complement(336456..336626) Methylobacterium extorquens CM4 7118652 YP_002419218.1 CDS Mchl_0353 NC_011757.1 336830 337723 D PFAM: methyltransferase type 11; KEGG: mex:Mext_0309 methyltransferase type 11; type 11 methyltransferase 336830..337723 Methylobacterium extorquens CM4 7118653 YP_002419219.1 CDS Mchl_0354 NC_011757.1 337720 338076 D PFAM: protein of unknown function DUF427; KEGG: mex:Mext_0310 hypothetical protein; hypothetical protein 337720..338076 Methylobacterium extorquens CM4 7118654 YP_002419220.1 CDS Mchl_0355 NC_011757.1 338085 339626 R KEGG: mex:Mext_0311 hypothetical protein; hypothetical protein complement(338085..339626) Methylobacterium extorquens CM4 7118655 YP_002419221.1 CDS Mchl_0356 NC_011757.1 339658 340074 R TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: mex:Mext_0312 mutator MutT protein; mutator MutT protein complement(339658..340074) Methylobacterium extorquens CM4 7118656 YP_002419222.1 CDS Mchl_0357 NC_011757.1 340071 340793 R PFAM: protein of unknown function DUF541; KEGG: mex:Mext_0313 hypothetical protein; hypothetical protein complement(340071..340793) Methylobacterium extorquens CM4 7118657 YP_002419223.1 CDS Mchl_0358 NC_011757.1 340790 342034 R KEGG: mex:Mext_0314 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ complement(340790..342034) Methylobacterium extorquens CM4 7118658 YP_002419224.1 CDS Mchl_0359 NC_011757.1 342415 342885 D KEGG: mex:Mext_0315 sensor histidine kinase; sensor histidine kinase 342415..342885 Methylobacterium extorquens CM4 7118659 YP_002419225.1 CDS Mchl_0360 NC_011757.1 342978 343532 D PFAM: glutathione peroxidase; KEGG: mex:Mext_0316 glutathione peroxidase; glutathione peroxidase 342978..343532 Methylobacterium extorquens CM4 7118660 YP_002419226.1 CDS Mchl_0361 NC_011757.1 343549 343815 R KEGG: mrd:Mrad2831_2681 hypothetical protein; hypothetical protein complement(343549..343815) Methylobacterium extorquens CM4 7118661 YP_002419227.1 CDS Mchl_0362 NC_011757.1 343875 344102 D KEGG: mex:Mext_0317 hypothetical protein; hypothetical protein 343875..344102 Methylobacterium extorquens CM4 7118662 YP_002419228.1 CDS Mchl_0363 NC_011757.1 344293 344535 D KEGG: mex:Mext_0318 hypothetical protein; hypothetical protein 344293..344535 Methylobacterium extorquens CM4 7118663 YP_002419229.1 CDS Mchl_0364 NC_011757.1 344542 347649 R proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(344542..347649) Methylobacterium extorquens CM4 7118664 YP_002419230.1 CDS Mchl_0365 NC_011757.1 347737 351264 R KEGG: mex:Mext_0320 hypothetical protein; hypothetical protein complement(347737..351264) Methylobacterium extorquens CM4 7118665 YP_002419231.1 CDS Mchl_0366 NC_011757.1 351425 351676 R KEGG: mex:Mext_0321 hypothetical protein; hypothetical protein complement(351425..351676) Methylobacterium extorquens CM4 7118666 YP_002419232.1 CDS Mchl_0367 NC_011757.1 351792 354179 D PFAM: UvrD/REP helicase; KEGG: mex:Mext_0322 UvrD/REP helicase; UvrD/REP helicase 351792..354179 Methylobacterium extorquens CM4 7118667 YP_002419233.1 CDS Mchl_0368 NC_011757.1 354576 355292 D PFAM: PhoH family protein; KEGG: mex:Mext_0323 PhoH family protein; PhoH family protein 354576..355292 Methylobacterium extorquens CM4 7118668 YP_002419234.1 CDS Mchl_0369 NC_011757.1 355363 356103 R TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: mex:Mext_0324 MIP family channel protein; MIP family channel protein complement(355363..356103) Methylobacterium extorquens CM4 7118669 YP_002419235.1 CDS Mchl_0370 NC_011757.1 356475 357368 R PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: mex:Mext_0325 exonuclease RNase T and DNA polymerase III; exonuclease RNase T and DNA polymerase III complement(356475..357368) Methylobacterium extorquens CM4 7118670 YP_002419236.1 CDS Mchl_0371 NC_011757.1 357519 358733 D KEGG: mpo:Mpop_0402 bicupin, oxalate decarboxylase family; TIGRFAM: bicupin, oxalate decarboxylase family; PFAM: Cupin domain protein; cupin; bicupin, oxalate decarboxylase family 357519..358733 Methylobacterium extorquens CM4 7118671 YP_002419237.1 CDS Mchl_0372 NC_011757.1 358739 361696 R PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; KEGG: mex:Mext_0326 (glutamate--ammonia-ligase) adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase complement(358739..361696) Methylobacterium extorquens CM4 7118672 YP_002419238.1 CDS Mchl_0373 NC_011757.1 361938 362615 R KEGG: mex:Mext_0327 hypothetical protein; hypothetical protein complement(361938..362615) Methylobacterium extorquens CM4 7118673 YP_002419239.1 CDS Mchl_0374 NC_011757.1 363052 363267 D KEGG: mpo:Mpop_0404 hypothetical protein; hypothetical protein 363052..363267 Methylobacterium extorquens CM4 7118674 YP_002419240.1 CDS Mchl_0375 NC_011757.1 363275 364705 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0328 ATPase domain-containing protein; histidine kinase complement(363275..364705) Methylobacterium extorquens CM4 7118675 YP_002419241.1 CDS Mchl_0376 NC_011757.1 364702 365400 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0329 response regulator receiver; transcriptional regulator complement(364702..365400) Methylobacterium extorquens CM4 7118676 YP_002419242.1 CDS Mchl_0377 NC_011757.1 365427 365936 R PFAM: OsmC family protein; KEGG: mex:Mext_0330 OsmC family protein; OsmC family protein complement(365427..365936) Methylobacterium extorquens CM4 7115100 YP_002419243.1 CDS Mchl_0378 NC_011757.1 366012 366791 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_0331 ABC transporter; ABC transporter complement(366012..366791) Methylobacterium extorquens CM4 7116385 YP_002419244.1 CDS Mchl_0379 NC_011757.1 366799 367638 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_0332 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(366799..367638) Methylobacterium extorquens CM4 7116386 YP_002419245.1 CDS Mchl_0381 NC_011757.1 368340 369314 R TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: mex:Mext_0334 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein complement(368340..369314) Methylobacterium extorquens CM4 7116388 YP_002419246.1 CDS Mchl_0382 NC_011757.1 369474 372260 D catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 369474..372260 Methylobacterium extorquens CM4 7116389 YP_002419247.1 CDS Mchl_0383 NC_011757.1 372352 372960 D PFAM: GrpE protein; KEGG: mex:Mext_0336 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 372352..372960 Methylobacterium extorquens CM4 7116390 YP_002419248.1 CDS Mchl_0384 NC_011757.1 373029 373886 R PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: mex:Mext_0339 prephenate dehydratase; prephenate dehydratase complement(373029..373886) Methylobacterium extorquens CM4 7116391 YP_002419249.1 CDS Mchl_0385 NC_011757.1 373903 374646 R KEGG: mex:Mext_0340 3-deoxy-D-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase complement(373903..374646) Methylobacterium extorquens CM4 7116392 YP_002419250.1 CDS Mchl_0386 NC_011757.1 374954 375871 D PFAM: cytochrome C class I; KEGG: mex:Mext_0341 cytochrome c class I; cytochrome C class I 374954..375871 Methylobacterium extorquens CM4 7116393 YP_002419251.1 CDS Mchl_0387 NC_011757.1 376044 377957 D PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_0342 extracellular solute-binding protein; family 5 extracellular solute-binding protein 376044..377957 Methylobacterium extorquens CM4 7116394 YP_002419252.1 CDS Mchl_0388 NC_011757.1 377954 379828 D PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_0343 extracellular solute-binding protein; family 5 extracellular solute-binding protein 377954..379828 Methylobacterium extorquens CM4 7116395 YP_002419253.1 CDS Mchl_0389 NC_011757.1 379838 380935 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_0344 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 379838..380935 Methylobacterium extorquens CM4 7116396 YP_002419254.1 CDS Mchl_0390 NC_011757.1 381004 381507 D PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_0345 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 381004..381507 Methylobacterium extorquens CM4 7116397 YP_002419255.1 CDS Mchl_0391 NC_011757.1 381621 383153 D PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_0346 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 381621..383153 Methylobacterium extorquens CM4 7116398 YP_002419256.1 CDS Mchl_0392 NC_011757.1 383214 383996 D PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0347 glycosyl transferase; family 2 glycosyl transferase 383214..383996 Methylobacterium extorquens CM4 7116399 YP_002419257.1 CDS Mchl_0393 NC_011757.1 384610 386070 D KEGG: mpo:Mpop_1057 transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; LuxR family transcriptional regulator 384610..386070 Methylobacterium extorquens CM4 7116401 YP_002419258.1 CDS Mchl_0394 NC_011757.1 386166 386321 D KEGG: mpo:Mpop_1056 hypothetical protein; hypothetical protein 386166..386321 Methylobacterium extorquens CM4 7116402 YP_002419259.1 CDS Mchl_0395 NC_011757.1 386380 386721 D PFAM: CsbD family protein; KEGG: mex:Mext_0364 CsbD family protein; CsbD family protein 386380..386721 Methylobacterium extorquens CM4 7116403 YP_002419260.1 CDS Mchl_0396 NC_011757.1 386766 387677 D KEGG: mex:Mext_0365 hypothetical protein; hypothetical protein 386766..387677 Methylobacterium extorquens CM4 7116404 YP_002419261.1 CDS Mchl_0397 NC_011757.1 387768 387971 D PFAM: CsbD family protein; KEGG: mex:Mext_0366 CsbD family protein; CsbD family protein 387768..387971 Methylobacterium extorquens CM4 7116405 YP_002419262.1 CDS Mchl_0398 NC_011757.1 388046 388429 D KEGG: mex:Mext_0367 CsbD family protein; CsbD family protein 388046..388429 Methylobacterium extorquens CM4 7116406 YP_002419263.1 CDS Mchl_0399 NC_011757.1 388453 388557 D KEGG: mpo:Mpop_1051 hypothetical protein; hypothetical protein 388453..388557 Methylobacterium extorquens CM4 7116407 YP_002419264.1 CDS Mchl_0400 NC_011757.1 388650 389570 R PFAM: protein of unknown function UPF0187; KEGG: mex:Mext_0368 hypothetical protein; hypothetical protein complement(388650..389570) Methylobacterium extorquens CM4 7116408 YP_002419265.1 CDS Mchl_0401 NC_011757.1 389581 390756 R TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mex:Mext_0369 acetylornithine deacetylase (ArgE); acetylornithine deacetylase ArgE complement(389581..390756) Methylobacterium extorquens CM4 7116409 YP_002419266.1 CDS apaG NC_011757.1 390753 391145 R protein associated with Co2+ and Mg2+ efflux; ApaG protein complement(390753..391145) Methylobacterium extorquens CM4 7116410 YP_002419267.1 CDS Mchl_0403 NC_011757.1 391313 391762 D KEGG: mex:Mext_0371 hypothetical protein; hypothetical protein 391313..391762 Methylobacterium extorquens CM4 7116411 YP_002419268.1 CDS Mchl_0404 NC_011757.1 391759 392877 D Catalyzes the deamination of dCTP to form dUTP; 2'-deoxycytidine 5'-triphosphate deaminase 391759..392877 Methylobacterium extorquens CM4 7116412 YP_002419269.1 CDS Mchl_0405 NC_011757.1 392925 393812 R PFAM: formate/nitrite transporter; KEGG: mex:Mext_0373 transporter, YfdC-like protein; formate/nitrite transporter complement(392925..393812) Methylobacterium extorquens CM4 7116413 YP_002419270.1 CDS Mchl_0406 NC_011757.1 393924 394661 R PFAM: molybdopterin binding domain; KEGG: mex:Mext_0374 molybdopterin binding domain-containing protein; molybdopterin binding domain complement(393924..394661) Methylobacterium extorquens CM4 7116414 YP_002419271.1 CDS Mchl_0407 NC_011757.1 394745 395491 D PFAM: sugar fermentation stimulation protein; KEGG: mex:Mext_0375 sugar fermentation stimulation protein; sugar fermentation stimulation protein 394745..395491 Methylobacterium extorquens CM4 7116415 YP_002419272.1 CDS Mchl_0408 NC_011757.1 395448 396389 R TIGRFAM: methyltransferase FkbM family; KEGG: mex:Mext_0376 FkbM family methyltransferase; FkbM family methyltransferase complement(395448..396389) Methylobacterium extorquens CM4 7116416 YP_002419273.1 CDS Mchl_0409 NC_011757.1 396433 397209 D PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_0377 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 396433..397209 Methylobacterium extorquens CM4 7116417 YP_002419274.1 CDS Mchl_0410 NC_011757.1 397348 397812 D KEGG: mex:Mext_0378 hypothetical protein; hypothetical protein 397348..397812 Methylobacterium extorquens CM4 7116418 YP_002419275.1 CDS Mchl_0411 NC_011757.1 397836 398615 R PFAM: ABC transporter; KEGG: mex:Mext_0379 ABC-2 type transporter; ABC transporter complement(397836..398615) Methylobacterium extorquens CM4 7116419 YP_002419276.1 CDS Mchl_0412 NC_011757.1 398612 399538 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_0380 ABC transporter; ABC transporter complement(398612..399538) Methylobacterium extorquens CM4 7116420 YP_002419277.1 CDS Mchl_0413 NC_011757.1 399859 401856 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mex:Mext_0381 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein complement(399859..401856) Methylobacterium extorquens CM4 7116421 YP_002419278.1 CDS Mchl_0414 NC_011757.1 402039 402797 D KEGG: mex:Mext_0382 hypothetical protein; hypothetical protein 402039..402797 Methylobacterium extorquens CM4 7116422 YP_002419279.1 CDS Mchl_0415 NC_011757.1 402794 403360 D KEGG: mex:Mext_0383 hypothetical protein; hypothetical protein 402794..403360 Methylobacterium extorquens CM4 7116423 YP_002419280.1 CDS Mchl_0416 NC_011757.1 403357 404367 D KEGG: mex:Mext_0384 hypothetical protein; hypothetical protein 403357..404367 Methylobacterium extorquens CM4 7116424 YP_002419281.1 CDS Mchl_0417 NC_011757.1 404376 404894 D KEGG: mex:Mext_0385 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein A 404376..404894 Methylobacterium extorquens CM4 7116425 YP_002419282.1 CDS Mchl_0418 NC_011757.1 404891 405601 D KEGG: mex:Mext_0386 hypothetical protein; hypothetical protein 404891..405601 Methylobacterium extorquens CM4 7116426 YP_002419283.1 CDS Mchl_0419 NC_011757.1 405689 406324 D PFAM: cytoplasmic chaperone TorD family protein; KEGG: mex:Mext_0387 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 405689..406324 Methylobacterium extorquens CM4 7116427 YP_002419284.1 CDS Mchl_0420 NC_011757.1 406401 406646 D TIGRFAM: formate dehydrogenase region TAT target; KEGG: mex:Mext_0388 formate dehydrogenase region TAT target; formate dehydrogenase region TAT target 406401..406646 Methylobacterium extorquens CM4 7116428 YP_002419285.1 CDS Mchl_0421 NC_011757.1 406654 409596 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mex:Mext_0389 molybdopterin oxidoreductase; molybdopterin oxidoreductase 406654..409596 Methylobacterium extorquens CM4 7116429 YP_002419286.1 CDS Mchl_0422 NC_011757.1 409614 410210 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mpo:Mpop_0458 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 409614..410210 Methylobacterium extorquens CM4 7116430 YP_002419287.1 CDS Mchl_0423 NC_011757.1 410279 411316 D TIGRFAM: formate dehydrogenase, subunit gamma; KEGG: mex:Mext_0391 formate dehydrogenase, subunit gamma; formate dehydrogenase subunit gamma 410279..411316 Methylobacterium extorquens CM4 7116431 YP_002419288.1 CDS Mchl_0424 NC_011757.1 411412 411651 D KEGG: mex:Mext_0392 hypothetical protein; hypothetical protein 411412..411651 Methylobacterium extorquens CM4 7116432 YP_002419289.1 CDS Mchl_0425 NC_011757.1 411696 412313 D KEGG: mex:Mext_0393 hypothetical protein; hypothetical protein 411696..412313 Methylobacterium extorquens CM4 7116433 YP_002419290.1 CDS Mchl_0426 NC_011757.1 412351 412944 R KEGG: mex:Mext_0394 hypothetical protein; hypothetical protein complement(412351..412944) Methylobacterium extorquens CM4 7116434 YP_002419291.1 CDS Mchl_0427 NC_011757.1 413264 413578 D KEGG: mpo:Mpop_0463 hypothetical protein; hypothetical protein 413264..413578 Methylobacterium extorquens CM4 7116435 YP_002419292.1 CDS Mchl_0428 NC_011757.1 413575 414210 D PFAM: regulatory protein TetR; KEGG: mex:Mext_0395 regulatory protein TetR; TetR family transcriptional regulator 413575..414210 Methylobacterium extorquens CM4 7116436 YP_002419293.1 CDS Mchl_0429 NC_011757.1 414207 415448 D TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_0396 RND family efflux transporter MFP subunit; efflux transporter RND family MFP subunit 414207..415448 Methylobacterium extorquens CM4 7116437 YP_002419294.1 CDS Mchl_0430 NC_011757.1 415498 418593 D PFAM: acriflavin resistance protein; KEGG: mex:Mext_0397 acriflavin resistance protein; acriflavin resistance protein 415498..418593 Methylobacterium extorquens CM4 7116438 YP_002419295.1 CDS Mchl_0431 NC_011757.1 418831 419109 R KEGG: mex:Mext_0398 hypothetical protein; hypothetical protein complement(418831..419109) Methylobacterium extorquens CM4 7116439 YP_002419296.1 CDS hrcA NC_011757.1 419240 420331 R negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(419240..420331) Methylobacterium extorquens CM4 7116440 YP_002419297.1 CDS Mchl_0433 NC_011757.1 420570 420872 D KEGG: mex:Mext_0400 hypothetical protein; hypothetical protein 420570..420872 Methylobacterium extorquens CM4 7116441 YP_002419298.1 CDS rph NC_011757.1 421037 421750 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 421037..421750 Methylobacterium extorquens CM4 7116442 YP_002419299.1 CDS Mchl_0435 NC_011757.1 421747 422382 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 421747..422382 Methylobacterium extorquens CM4 7116443 YP_002419300.1 CDS Mchl_0436 NC_011757.1 422614 423810 D KEGG: mex:Mext_0403 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: radical SAM protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 422614..423810 Methylobacterium extorquens CM4 7116444 YP_002419301.1 CDS Mchl_0437 NC_011757.1 423815 425020 R KEGG: mex:Mext_0404 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(423815..425020) Methylobacterium extorquens CM4 7116445 YP_002419302.1 CDS Mchl_0438 NC_011757.1 425141 426091 D PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_0405 uroporphyrin-III C/tetrapyrrole methyltransferase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 425141..426091 Methylobacterium extorquens CM4 7116446 YP_002419303.1 CDS Mchl_0439 NC_011757.1 426075 426461 D PFAM: protein of unknown function UPF0102; KEGG: mex:Mext_0406 hypothetical protein; hypothetical protein 426075..426461 Methylobacterium extorquens CM4 7116447 YP_002419304.1 CDS Mchl_0440 NC_011757.1 426491 426883 R PFAM: response regulator receiver; KEGG: mex:Mext_0407 response regulator receiver; response regulator receiver protein complement(426491..426883) Methylobacterium extorquens CM4 7116448 YP_002419305.1 CDS Mchl_0441 NC_011757.1 427176 428087 D PFAM: substrate-binding region of ABC-type glycine betaine transporter; KEGG: mex:Mext_0408 substrate-binding region of ABC-type glycine betaine transporter; glycine betaine ABC transporter substrate-binding protein 427176..428087 Methylobacterium extorquens CM4 7116449 YP_002419306.1 CDS Mchl_0442 NC_011757.1 428084 429226 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_0409 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 428084..429226 Methylobacterium extorquens CM4 7116450 YP_002419307.1 CDS Mchl_0443 NC_011757.1 429223 429951 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_0410 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 429223..429951 Methylobacterium extorquens CM4 7116451 YP_002419308.1 CDS Mchl_0444 NC_011757.1 429958 431067 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_0411 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(429958..431067) Methylobacterium extorquens CM4 7116452 YP_002419309.1 CDS Mchl_0445 NC_011757.1 431174 432091 R PFAM: Extensin family protein; KEGG: mex:Mext_0412 extensin family protein; Extensin family protein complement(431174..432091) Methylobacterium extorquens CM4 7116453 YP_002419310.1 CDS Mchl_0446 NC_011757.1 432290 434389 D PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: mex:Mext_0413 peptidyl-dipeptidase DCP; peptidyl-dipeptidase Dcp 432290..434389 Methylobacterium extorquens CM4 7116454 YP_002419311.1 CDS Mchl_0447 NC_011757.1 434499 436172 R PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: mex:Mext_0414 formate--tetrahydrofolate ligase; formate--tetrahydrofolate ligase complement(434499..436172) Methylobacterium extorquens CM4 7116455 YP_002419312.1 CDS Mchl_0448 NC_011757.1 436414 436635 R PFAM: Heavy metal transport/detoxification protein; KEGG: mex:Mext_0415 heavy metal transport/detoxification protein; Heavy metal transport/detoxification protein complement(436414..436635) Methylobacterium extorquens CM4 7116456 YP_002419313.1 CDS Mchl_0449 NC_011757.1 436922 438400 D PFAM: EAL domain protein; KEGG: mex:Mext_0416 EAL domain-containing protein; diguanylate phosphodiesterase 436922..438400 Methylobacterium extorquens CM4 7116457 YP_002419314.1 CDS Mchl_0450 NC_011757.1 438435 438662 R KEGG: mex:Mext_0417 hypothetical protein; hypothetical protein complement(438435..438662) Methylobacterium extorquens CM4 7116458 YP_002419315.1 CDS Mchl_0451 NC_011757.1 438833 439369 R KEGG: mex:Mext_0418 chemotaxis protein; chemotaxis phosphatase, CheZ complement(438833..439369) Methylobacterium extorquens CM4 7116459 YP_002419316.1 CDS Mchl_0452 NC_011757.1 439553 439936 R PFAM: response regulator receiver; KEGG: mpo:Mpop_0489 response regulator receiver protein; response regulator receiver protein complement(439553..439936) Methylobacterium extorquens CM4 7116460 YP_002419317.1 CDS Mchl_0453 NC_011757.1 440243 441256 D TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; riboflavin kinase; KEGG: mex:Mext_0420 riboflavin biosynthesis protein RibF; riboflavin biosynthesis protein RibF 440243..441256 Methylobacterium extorquens CM4 7116461 YP_002419318.1 CDS Mchl_0454 NC_011757.1 441447 442451 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_0421 glyoxylate reductase; glyoxylate reductase complement(441447..442451) Methylobacterium extorquens CM4 7116462 YP_002419319.1 CDS Mchl_0455 NC_011757.1 442778 443371 D PFAM: protein of unknown function DUF1058; KEGG: mex:Mext_0422 hypothetical protein; hypothetical protein 442778..443371 Methylobacterium extorquens CM4 7116463 YP_002419320.1 CDS Mchl_0456 NC_011757.1 443475 443975 R PFAM: ferric-uptake regulator; KEGG: mex:Mext_0423 ferric-uptake regulator; Fur family ferric uptake regulator complement(443475..443975) Methylobacterium extorquens CM4 7116464 YP_002419321.1 CDS Mchl_0457 NC_011757.1 444252 444791 D catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 444252..444791 Methylobacterium extorquens CM4 7116465 YP_002419322.1 CDS Mchl_0458 NC_011757.1 444951 446177 D FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase I 444951..446177 Methylobacterium extorquens CM4 7114614 YP_002419323.1 CDS Mchl_0459 NC_011757.1 446331 446450 D KEGG: mpo:Mpop_0496 hypothetical protein; hypothetical protein 446331..446450 Methylobacterium extorquens CM4 7114615 YP_002419324.1 CDS Mchl_0460 NC_011757.1 446651 447481 D KEGG: mex:Mext_0426 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 446651..447481 Methylobacterium extorquens CM4 7114616 YP_002419325.1 CDS Mchl_0461 NC_011757.1 447549 448310 D KEGG: mex:Mext_0427 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP 447549..448310 Methylobacterium extorquens CM4 7114617 YP_002419326.1 CDS Mchl_0462 NC_011757.1 448367 448768 D PFAM: DoxX family protein; KEGG: mex:Mext_0428 DoxX family protein; DoxX family protein 448367..448768 Methylobacterium extorquens CM4 7114618 YP_002419327.1 CDS Mchl_0463 NC_011757.1 448772 452098 R KEGG: mex:Mext_0429 tetratricopeptide TPR_4 protein; tetratricopeptide TPR_4 protein complement(448772..452098) Methylobacterium extorquens CM4 7114619 YP_002419328.1 CDS Mchl_0464 NC_011757.1 452238 452669 R KEGG: mex:Mext_0430 hypothetical protein; hypothetical protein complement(452238..452669) Methylobacterium extorquens CM4 7114620 YP_002419329.1 CDS Mchl_0465 NC_011757.1 452823 454970 R PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: mex:Mext_0431 oligopeptidase B; oligopeptidase B complement(452823..454970) Methylobacterium extorquens CM4 7114621 YP_002419330.1 CDS Mchl_0466 NC_011757.1 455399 455836 D PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_0432 ROSMUCR transcriptional regulator; MucR family transcriptional regulator 455399..455836 Methylobacterium extorquens CM4 7114622 YP_002419331.1 CDS Mchl_0467 NC_011757.1 455982 456176 D KEGG: mex:Mext_0433 hypothetical protein; hypothetical protein 455982..456176 Methylobacterium extorquens CM4 7114623 YP_002419332.1 CDS Mchl_0468 NC_011757.1 456295 457137 D KEGG: mex:Mext_0434 hypothetical protein; hypothetical protein 456295..457137 Methylobacterium extorquens CM4 7114624 YP_002419333.1 CDS Mchl_0469 NC_011757.1 457175 457603 R PFAM: Fe-S metabolism associated SufE; KEGG: mex:Mext_0435 Fe-S metabolism associated SufE; Fe-S metabolism associated SufE complement(457175..457603) Methylobacterium extorquens CM4 7114625 YP_002419334.1 CDS Mchl_0470 NC_011757.1 457692 458771 R KEGG: mex:Mext_0436 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; hypothetical protein; SMART: PAC repeat-containing protein; signal transduction histidine kinase complement(457692..458771) Methylobacterium extorquens CM4 7114626 YP_002419335.1 CDS Mchl_0471 NC_011757.1 458924 462601 R KEGG: mex:Mext_0437 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase complement(458924..462601) Methylobacterium extorquens CM4 7114627 YP_002419336.1 CDS Mchl_0472 NC_011757.1 463279 463788 D KEGG: mex:Mext_0438 hypothetical protein; hypothetical protein 463279..463788 Methylobacterium extorquens CM4 7114628 YP_002419337.1 CDS Mchl_0473 NC_011757.1 463904 464068 D KEGG: mex:Mext_0439 hypothetical protein; hypothetical protein 463904..464068 Methylobacterium extorquens CM4 7114629 YP_002419338.1 CDS Mchl_0474 NC_011757.1 464115 464555 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_0440 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(464115..464555) Methylobacterium extorquens CM4 7114630 YP_002419339.1 CDS Mchl_0475 NC_011757.1 464978 465886 D KEGG: mex:Mext_0541 hypothetical protein; hypothetical protein 464978..465886 Methylobacterium extorquens CM4 7114631 YP_002419340.1 CDS pepN NC_011757.1 465965 468601 D TIGRFAM: aminopeptidase N; PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: mex:Mext_0542 aminopeptidase N; aminopeptidase N 465965..468601 Methylobacterium extorquens CM4 7114632 YP_002419341.1 CDS Mchl_0477 NC_011757.1 468787 471147 D KEGG: mex:Mext_0543 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 468787..471147 Methylobacterium extorquens CM4 7114633 YP_002419342.1 CDS Mchl_0479 NC_011757.1 471554 472480 D TIGRFAM: arginase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: mex:Mext_0544 arginase; arginase 471554..472480 Methylobacterium extorquens CM4 7114635 YP_002419343.1 CDS Mchl_0480 NC_011757.1 472516 473994 R KEGG: mex:Mext_0545 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase complement(472516..473994) Methylobacterium extorquens CM4 7114636 YP_002419344.1 CDS Mchl_0481 NC_011757.1 474265 474717 R KEGG: mex:Mext_0546 hypothetical protein; hypothetical protein complement(474265..474717) Methylobacterium extorquens CM4 7114637 YP_002419345.1 CDS Mchl_0482 NC_011757.1 475093 475254 D KEGG: mex:Mext_0547 hypothetical protein; hypothetical protein 475093..475254 Methylobacterium extorquens CM4 7114638 YP_002419346.1 CDS Mchl_0483 NC_011757.1 475334 475657 R PFAM: CutA1 divalent ion tolerance protein; KEGG: mex:Mext_0548 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein complement(475334..475657) Methylobacterium extorquens CM4 7114639 YP_002419347.1 CDS Mchl_0484 NC_011757.1 475763 476533 D PFAM: ATP-NAD/AcoX kinase; KEGG: mex:Mext_0549 NAD(+) kinase; NAD(+) kinase 475763..476533 Methylobacterium extorquens CM4 7114640 YP_002419348.1 CDS Mchl_0485 NC_011757.1 476602 476814 R PFAM: protein of unknown function DUF1674; KEGG: mex:Mext_0550 hypothetical protein; hypothetical protein complement(476602..476814) Methylobacterium extorquens CM4 7114641 YP_002419349.1 CDS Mchl_0486 NC_011757.1 476919 478283 D PFAM: Fmu (Sun) domain protein; methyltransferase small; methyltransferase type 11; KEGG: mex:Mext_0551 Fmu (Sun) domain-containing protein; Fmu (Sun) domain-containing protein 476919..478283 Methylobacterium extorquens CM4 7114642 YP_002419350.1 CDS Mchl_0487 NC_011757.1 478345 478509 R KEGG: mex:Mext_0552 hypothetical protein; hypothetical protein complement(478345..478509) Methylobacterium extorquens CM4 7114643 YP_002419351.1 CDS Mchl_0488 NC_011757.1 478817 479890 D KEGG: mex:Mext_0553 hypothetical protein; hypothetical protein 478817..479890 Methylobacterium extorquens CM4 7114644 YP_002419352.1 CDS Mchl_0489 NC_011757.1 480260 481453 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III; KEGG: mex:Mext_0554 aminotransferase class I and II; class I and II aminotransferase 480260..481453 Methylobacterium extorquens CM4 7114645 YP_002419353.1 CDS Mchl_0490 NC_011757.1 481514 481843 R KEGG: mex:Mext_0555 hypothetical protein; hypothetical protein complement(481514..481843) Methylobacterium extorquens CM4 7114646 YP_002419354.1 CDS Mchl_0491 NC_011757.1 482189 483121 D TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: mex:Mext_0556 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 482189..483121 Methylobacterium extorquens CM4 7114647 YP_002419355.1 CDS Mchl_0492 NC_011757.1 483231 483971 D TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: mex:Mext_0557 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 483231..483971 Methylobacterium extorquens CM4 7114648 YP_002419356.1 CDS acpP NC_011757.1 484235 484471 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 484235..484471 Methylobacterium extorquens CM4 7114649 YP_002419357.1 CDS Mchl_0494 NC_011757.1 484610 485872 D TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: mex:Mext_0559 3-oxoacyl-(acyl-carrier-protein) synthase 2; 3-oxoacyl-(acyl-carrier-protein) synthase 2 484610..485872 Methylobacterium extorquens CM4 7114650 YP_002419358.1 CDS Mchl_0495 NC_011757.1 486135 487538 D PFAM: aminodeoxychorismate lyase; KEGG: mex:Mext_0560 aminodeoxychorismate lyase; aminodeoxychorismate lyase 486135..487538 Methylobacterium extorquens CM4 7114651 YP_002419359.1 CDS Mchl_0496 NC_011757.1 487569 488315 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: mex:Mext_0561 HAD family hydrolase; HAD-superfamily hydrolase complement(487569..488315) Methylobacterium extorquens CM4 7114652 YP_002419360.1 CDS Mchl_0497 NC_011757.1 488299 490686 R PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: mex:Mext_0562 kojibiose phosphorylase; Kojibiose phosphorylase complement(488299..490686) Methylobacterium extorquens CM4 7114653 YP_002419361.1 CDS Mchl_0498 NC_011757.1 491553 492755 D TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: mex:Mext_0563 acetate kinase; acetate kinase 491553..492755 Methylobacterium extorquens CM4 7114654 YP_002419362.1 CDS Mchl_0499 NC_011757.1 492752 493783 D PFAM: secretion protein HlyD; KEGG: mex:Mext_0564 secretion protein HlyD; secretion protein HlyD 492752..493783 Methylobacterium extorquens CM4 7114655 YP_002419363.1 CDS Mchl_0500 NC_011757.1 493791 496529 D PFAM: ABC transporter; ABC-2 type transporter; SMART: ATPase AAA; KEGG: mex:Mext_0565 ABC transporter; ABC transporter 493791..496529 Methylobacterium extorquens CM4 7114656 YP_002419364.1 CDS Mchl_0501 NC_011757.1 496531 497730 D PFAM: ABC transporter; KEGG: mex:Mext_0566 ABC-2 type transporter; ABC transporter 496531..497730 Methylobacterium extorquens CM4 7114657 YP_002419365.1 CDS Mchl_0502 NC_011757.1 497810 500245 D PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: mex:Mext_0567 phosphoketolase; phosphoketolase 497810..500245 Methylobacterium extorquens CM4 7114658 YP_002419366.1 CDS Mchl_0503 NC_011757.1 500369 501499 D PFAM: monooxygenase FAD-binding; KEGG: mex:Mext_0568 monooxygenase FAD-binding; FAD-binding monooxygenase 500369..501499 Methylobacterium extorquens CM4 7114659 YP_002419367.1 CDS Mchl_0504 NC_011757.1 501777 503384 D KEGG: mrd:Mrad2831_5192 hypothetical protein; hypothetical protein 501777..503384 Methylobacterium extorquens CM4 7114660 YP_002419368.1 CDS Mchl_0505 NC_011757.1 503381 503581 R KEGG: mrd:Mrad2831_4144 hypothetical protein; hypothetical protein complement(503381..503581) Methylobacterium extorquens CM4 7114661 YP_002419369.1 CDS Mchl_0506 NC_011757.1 503991 504407 D hypothetical protein 503991..504407 Methylobacterium extorquens CM4 7114662 YP_002419370.1 CDS Mchl_0507 NC_011757.1 504581 505591 D KEGG: mpo:Mpop_0167 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase 504581..505591 Methylobacterium extorquens CM4 7114663 YP_002419371.1 CDS Mchl_0508 NC_011757.1 505666 507564 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mrd:Mrad2831_5233 histidine kinase; histidine kinase complement(505666..507564) Methylobacterium extorquens CM4 7114664 YP_002419372.1 CDS Mchl_0509 NC_011757.1 507561 508562 R PFAM: ATP-binding region ATPase domain protein; stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mrd:Mrad2831_5232 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor, serine/threonine protein kinase complement(507561..508562) Methylobacterium extorquens CM4 7114665 YP_002419373.1 CDS Mchl_0510 NC_011757.1 508565 508969 R PFAM: ATP-binding region ATPase domain protein; KEGG: mrd:Mrad2831_5231 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor, serine/threonine protein kinase complement(508565..508969) Methylobacterium extorquens CM4 7114666 YP_002419374.1 CDS Mchl_0511 NC_011757.1 508950 509351 R PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: mrd:Mrad2831_5230 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(508950..509351) Methylobacterium extorquens CM4 7114667 YP_002419375.1 CDS Mchl_0512 NC_011757.1 509356 510234 R PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: mrd:Mrad2831_5229 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(509356..510234) Methylobacterium extorquens CM4 7114668 YP_002419376.1 CDS Mchl_0514 NC_011757.1 510659 510922 D KEGG: mrd:Mrad2831_5546 hypothetical protein; hypothetical protein 510659..510922 Methylobacterium extorquens CM4 7114670 YP_002419377.1 CDS Mchl_0515 NC_011757.1 510941 512191 R PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: mpo:Mpop_3728 signal transduction histidine kinase; signal transduction histidine kinase complement(510941..512191) Methylobacterium extorquens CM4 7114671 YP_002419378.1 CDS Mchl_0516 NC_011757.1 512580 512954 D PFAM: response regulator receiver; KEGG: mpo:Mpop_0095 response regulator receiver protein; response regulator receiver protein 512580..512954 Methylobacterium extorquens CM4 7114672 YP_002419379.1 CDS Mchl_0517 NC_011757.1 513038 515218 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: mpo:Mpop_0171 multi-sensor hybrid histidine kinase; histidine kinase complement(513038..515218) Methylobacterium extorquens CM4 7114673 YP_002419380.1 CDS Mchl_0518 NC_011757.1 515378 516898 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mpo:Mpop_0175 diguanylate cyclase; diguanylate cyclase complement(515378..516898) Methylobacterium extorquens CM4 7114674 YP_002419381.1 CDS Mchl_0519 NC_011757.1 517132 517377 D KEGG: mpo:Mpop_0176 hypothetical protein; hypothetical protein 517132..517377 Methylobacterium extorquens CM4 7114675 YP_002419382.1 CDS Mchl_0520 NC_011757.1 517559 517858 R KEGG: mex:Mext_1918 hypothetical protein; hypothetical protein complement(517559..517858) Methylobacterium extorquens CM4 7114676 YP_002419383.1 CDS Mchl_0522 NC_011757.1 518933 519484 D PFAM: inorganic pyrophosphatase; KEGG: bid:Bind_2987 inorganic pyrophosphatase; inorganic pyrophosphatase 518933..519484 Methylobacterium extorquens CM4 7114678 YP_002419384.1 CDS Mchl_0523 NC_011757.1 519860 520225 D KEGG: met:M446_1189 hypothetical protein; hypothetical protein 519860..520225 Methylobacterium extorquens CM4 7114679 YP_002419385.1 CDS Mchl_0525 NC_011757.1 521087 521842 D PFAM: EAL domain protein; KEGG: mex:Mext_3242 EAL domain-containing protein; diguanylate phosphodiesterase 521087..521842 Methylobacterium extorquens CM4 7114681 YP_002419386.1 CDS Mchl_0526 NC_011757.1 521953 522426 R TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; KEGG: mex:Mext_0113 PAS sensor protein; PAS/PAC sensor protein complement(521953..522426) Methylobacterium extorquens CM4 7114682 YP_002419387.1 CDS Mchl_0527 NC_011757.1 522650 523102 D PFAM: BLUF domain protein; KEGG: mex:Mext_0114 BLUF domain-containing protein; BLUF domain-containing protein 522650..523102 Methylobacterium extorquens CM4 7114683 YP_002419388.1 CDS Mchl_0528 NC_011757.1 523107 523580 D PFAM: response regulator receiver; KEGG: mpo:Mpop_3155 response regulator receiver protein; response regulator receiver protein 523107..523580 Methylobacterium extorquens CM4 7114684 YP_002419389.1 CDS Mchl_0529 NC_011757.1 523690 523821 R KEGG: mex:Mext_1129 hypothetical protein; hypothetical protein complement(523690..523821) Methylobacterium extorquens CM4 7114685 YP_002419390.1 CDS Mchl_0530 NC_011757.1 523898 526285 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; PAS fold-4 domain protein; KEGG: mpo:Mpop_0141 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PAS/PAC and MHYT sensor-containing diguanylate cyclase/phosphodiesterase 523898..526285 Methylobacterium extorquens CM4 7114686 YP_002419391.1 CDS Mchl_0531 NC_011757.1 526936 528108 D PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: met:M446_0110 alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 526936..528108 Methylobacterium extorquens CM4 7114687 YP_002419392.1 CDS Mchl_0532 NC_011757.1 528180 528785 D KEGG: met:M446_0111 hypothetical protein; hypothetical protein 528180..528785 Methylobacterium extorquens CM4 7114688 YP_002419393.1 CDS Mchl_0533 NC_011757.1 528808 529932 D KEGG: met:M446_0112 hypothetical protein; hypothetical protein 528808..529932 Methylobacterium extorquens CM4 7114689 YP_002419394.1 CDS Mchl_0534 NC_011757.1 530059 530844 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mfa:Mfla_0397 AraC family transcriptional regulator; AraC family transcriptional regulator complement(530059..530844) Methylobacterium extorquens CM4 7114690 YP_002419395.1 CDS Mchl_0535 NC_011757.1 531159 531626 D KEGG: mpo:Mpop_4442 hypothetical protein; hypothetical protein 531159..531626 Methylobacterium extorquens CM4 7114691 YP_002419396.1 CDS Mchl_0536 NC_011757.1 531619 532149 D PFAM: ROSMUCR transcriptional regulator; KEGG: mpo:Mpop_2952 MucR family transcriptional regulator; MucR family transcriptional regulator 531619..532149 Methylobacterium extorquens CM4 7114692 YP_002419397.1 CDS Mchl_0537 NC_011757.1 532426 533868 R KEGG: mpo:Mpop_3896 hypothetical protein; hypothetical protein complement(532426..533868) Methylobacterium extorquens CM4 7114853 YP_002419398.1 CDS Mchl_0538 NC_011757.1 534478 535569 R PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mex:Mext_3509 metal-dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase complement(534478..535569) Methylobacterium extorquens CM4 7114854 YP_002419399.1 CDS Mchl_0540 NC_011757.1 536453 539722 R KEGG: mpo:Mpop_0149 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase complement(536453..539722) Methylobacterium extorquens CM4 7117781 YP_002419400.1 CDS Mchl_0541 NC_011757.1 540461 541036 R PFAM: TadE family protein; KEGG: mrd:Mrad2831_2082 TadE family protein; TadE family protein complement(540461..541036) Methylobacterium extorquens CM4 7117782 YP_002419401.1 CDS Mchl_0542 NC_011757.1 541033 541614 R PFAM: TadE family protein; KEGG: mrd:Mrad2831_2083 TadE family protein; TadE family protein complement(541033..541614) Methylobacterium extorquens CM4 7117783 YP_002419402.1 CDS Mchl_0543 NC_011757.1 541611 543167 R KEGG: pzu:PHZ_c1612 hypothetical protein; hypothetical protein complement(541611..543167) Methylobacterium extorquens CM4 7117784 YP_002419403.1 CDS Mchl_0544 NC_011757.1 544671 545318 D PFAM: protein of unknown function DUF159; KEGG: mex:Mext_3586 hypothetical protein; hypothetical protein 544671..545318 Methylobacterium extorquens CM4 7117785 YP_002419404.1 CDS Mchl_0545 NC_011757.1 545412 545603 R hypothetical protein complement(545412..545603) Methylobacterium extorquens CM4 7117786 YP_002419405.1 CDS Mchl_0546 NC_011757.1 545909 546226 R KEGG: mex:Mext_1866 hypothetical protein; hypothetical protein complement(545909..546226) Methylobacterium extorquens CM4 7117787 YP_002419406.1 CDS Mchl_0548 NC_011757.1 546707 546952 R hypothetical protein complement(546707..546952) Methylobacterium extorquens CM4 7117789 YP_002419407.1 CDS Mchl_0551 NC_011757.1 548476 549072 D PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: mpo:Mpop_2198 transcriptional regulator, XRE family; XRE family transcriptional regulator 548476..549072 Methylobacterium extorquens CM4 7117792 YP_002419408.1 CDS Mchl_0554 NC_011757.1 550690 551229 R PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: gka:GK2787 thiol peroxidase (superoxide-inducible protein 8); redoxin complement(550690..551229) Methylobacterium extorquens CM4 7117795 YP_002419409.1 CDS Mchl_0555 NC_011757.1 552207 553430 R KEGG: mex:Mext_2100 hypothetical protein; hypothetical protein complement(552207..553430) Methylobacterium extorquens CM4 7117796 YP_002419410.1 CDS Mchl_0556 NC_011757.1 553957 554820 R TIGRFAM: ferredoxin-type protein, NapH/MauN family; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pde:Pden_4738 ferredoxin-type protein, NapH/MauN family; ferredoxin-type protein, NapH/MauN family complement(553957..554820) Methylobacterium extorquens CM4 7117797 YP_002419411.1 CDS Mchl_0557 NC_011757.1 554820 555482 R TIGRFAM: MauM/NapG family ferredoxin-type protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pde:Pden_4737 MauM/NapG family ferredoxin-type protein; MauM/NapG family ferredoxin-type protein complement(554820..555482) Methylobacterium extorquens CM4 7117798 YP_002419412.1 CDS Mchl_0558 NC_011757.1 555501 555845 R KEGG: mfa:Mfla_0553 hypothetical protein; hypothetical protein complement(555501..555845) Methylobacterium extorquens CM4 7117799 YP_002419413.1 CDS Mchl_0559 NC_011757.1 555859 556920 R PFAM: Di-haem cytochrome C peroxidase; KEGG: mfa:Mfla_0552 cytochrome-c peroxidase; cytochrome-c peroxidase complement(555859..556920) Methylobacterium extorquens CM4 7117800 YP_002419414.1 CDS Mchl_0560 NC_011757.1 556954 557841 R KEGG: pde:Pden_4735 hypothetical protein; hypothetical protein complement(556954..557841) Methylobacterium extorquens CM4 7117801 YP_002419415.1 CDS Mchl_0561 NC_011757.1 557976 558335 R TIGRFAM: amicyanin; PFAM: blue (type 1) copper domain protein; KEGG: pde:Pden_4734 amicyanin; amicyanin complement(557976..558335) Methylobacterium extorquens CM4 7117802 YP_002419416.1 CDS Mchl_0562 NC_011757.1 558408 558968 R KEGG: pde:Pden_4733 methylamine dehydrogenase light chain; TIGRFAM: methylamine dehydrogenase light chain; PFAM: methylamine dehydrogenase light chain domain protein; methylamine dehydrogenase light chain complement(558408..558968) Methylobacterium extorquens CM4 7117803 YP_002419417.1 CDS Mchl_0563 NC_011757.1 559026 559643 R TIGRFAM: methylamine dehydrogenase accessory protein MauD; PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: pde:Pden_4732 methylamine dehydrogenase accessory protein MauD; methylamine dehydrogenase accessory protein MauD complement(559026..559643) Methylobacterium extorquens CM4 7117804 YP_002419418.1 CDS Mchl_0564 NC_011757.1 559649 560209 R PFAM: methylamine utilisation MauE; KEGG: pde:Pden_4731 methylamine utilisation MauE; methylamine utilisation MauE complement(559649..560209) Methylobacterium extorquens CM4 7117805 YP_002419419.1 CDS Mchl_0565 NC_011757.1 560209 561441 R KEGG: pde:Pden_4730 methylamine dehydrogenase heavy chain; TIGRFAM: methylamine dehydrogenase heavy chain; PFAM: methylamine dehydrogenase heavy subunit; methylamine dehydrogenase heavy chain complement(560209..561441) Methylobacterium extorquens CM4 7117806 YP_002419420.1 CDS Mchl_0566 NC_011757.1 561508 562365 R KEGG: pde:Pden_4729 hypothetical protein; hypothetical protein complement(561508..562365) Methylobacterium extorquens CM4 7117807 YP_002419421.1 CDS Mchl_0571 NC_011757.1 563552 565888 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mrd:Mrad2831_5661 TonB-dependent receptor; TonB-dependent receptor complement(563552..565888) Methylobacterium extorquens CM4 7117812 YP_002419422.1 CDS Mchl_0572 NC_011757.1 565993 567369 R PFAM: PepSY-associated TM helix domain protein; KEGG: mrd:Mrad2831_5663 PepSY-associated TM helix domain-containing protein; PepSY-associated TM helix domain-containing protein complement(565993..567369) Methylobacterium extorquens CM4 7117813 YP_002419423.1 CDS Mchl_0573 NC_011757.1 567410 567778 R KEGG: mpo:Mpop_3046 hypothetical protein; hypothetical protein complement(567410..567778) Methylobacterium extorquens CM4 7117814 YP_002419424.1 CDS Mchl_0574 NC_011757.1 567932 568186 R hypothetical protein complement(567932..568186) Methylobacterium extorquens CM4 7117815 YP_002419425.1 CDS Mchl_0575 NC_011757.1 568574 568705 D KEGG: rec:RHECIAT_PA0000344 hypothetical protein; hypothetical protein 568574..568705 Methylobacterium extorquens CM4 7117816 YP_002419426.1 CDS Mchl_0576 NC_011757.1 568751 569680 D KEGG: rec:RHECIAT_PA0000344 hypothetical protein; hypothetical protein 568751..569680 Methylobacterium extorquens CM4 7117817 YP_002419427.1 CDS Mchl_0577 NC_011757.1 569677 570021 D KEGG: mrd:Mrad2831_5316 hypothetical protein; hypothetical protein 569677..570021 Methylobacterium extorquens CM4 7117818 YP_002419428.1 CDS Mchl_0578 NC_011757.1 570810 571868 D PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: mex:Mext_0569 ABC transporter; ABC transporter 570810..571868 Methylobacterium extorquens CM4 7117820 YP_002419429.1 CDS Mchl_0579 NC_011757.1 571971 572996 D PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_0570 extracellular solute-binding protein; family 1 extracellular solute-binding protein 571971..572996 Methylobacterium extorquens CM4 7117821 YP_002419430.1 CDS Mchl_0580 NC_011757.1 573073 574725 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_0571 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 573073..574725 Methylobacterium extorquens CM4 7117822 YP_002419431.1 CDS Mchl_0581 NC_011757.1 574733 574834 R KEGG: mpo:Mpop_0545 hypothetical protein; hypothetical protein complement(574733..574834) Methylobacterium extorquens CM4 7117823 YP_002419432.1 CDS Mchl_0582 NC_011757.1 575148 575402 R KEGG: mex:Mext_0572 hypothetical protein; hypothetical protein complement(575148..575402) Methylobacterium extorquens CM4 7117824 YP_002419433.1 CDS Mchl_0583 NC_011757.1 575673 576398 R PFAM: protein of unknown function DUF540; KEGG: mex:Mext_0573 hypothetical protein; hypothetical protein complement(575673..576398) Methylobacterium extorquens CM4 7117825 YP_002419434.1 CDS Mchl_0584 NC_011757.1 576558 577523 D PFAM: hypothetical protein; Kelch repeat protein; KEGG: mex:Mext_0574 kelch repeat-containing protein; hypothetical protein 576558..577523 Methylobacterium extorquens CM4 7117826 YP_002419435.1 CDS Mchl_0585 NC_011757.1 577611 578939 D PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_0575 amine oxidase; amine oxidase 577611..578939 Methylobacterium extorquens CM4 7117827 YP_002419436.1 CDS Mchl_0586 NC_011757.1 579048 579683 D PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_0576 cyclic nucleotide-binding; cyclic nucleotide-binding protein 579048..579683 Methylobacterium extorquens CM4 7117828 YP_002419437.1 CDS Mchl_0587 NC_011757.1 579687 580106 R PFAM: cupin; KEGG: mex:Mext_0577 cupin 2 domain-containing protein; cupin complement(579687..580106) Methylobacterium extorquens CM4 7117829 YP_002419438.1 CDS Mchl_0588 NC_011757.1 580314 580517 D KEGG: mpo:Mpop_0552 hypothetical protein; hypothetical protein 580314..580517 Methylobacterium extorquens CM4 7117830 YP_002419439.1 CDS Mchl_0589 NC_011757.1 580677 580790 R KEGG: mpo:Mpop_0553 hypothetical protein; hypothetical protein complement(580677..580790) Methylobacterium extorquens CM4 7117831 YP_002419440.1 CDS Mchl_0590 NC_011757.1 580944 581234 R KEGG: mex:Mext_0579 hypothetical protein; hypothetical protein complement(580944..581234) Methylobacterium extorquens CM4 7117832 YP_002419441.1 CDS Mchl_0591 NC_011757.1 581512 581658 D KEGG: mpo:Mpop_0555 hypothetical protein; hypothetical protein 581512..581658 Methylobacterium extorquens CM4 7117833 YP_002419442.1 CDS Mchl_0592 NC_011757.1 581869 582936 D TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_0581 sulfate ABC transporter periplasmic sulfate-binding protein; sulfate ABC transporter periplasmic sulfate-binding protein 581869..582936 Methylobacterium extorquens CM4 7117834 YP_002419443.1 CDS Mchl_0593 NC_011757.1 582941 583795 D TIGRFAM: sulfate ABC transporter inner membrane subunit; sulfate ABC transporter inner membrane subunit CysT; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_0582 sulfate ABC transporter inner membrane subunit CysT; sulfate ABC transporter inner membrane subunit CysT 582941..583795 Methylobacterium extorquens CM4 7117835 YP_002419444.1 CDS Mchl_0594 NC_011757.1 583788 584690 D TIGRFAM: sulfate ABC transporter inner membrane subunit; sulfate ABC transporter inner membrane subunit CysW; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_0583 sulfate ABC transporter inner membrane subunit CysW; sulfate ABC transporter inner membrane subunit CysW 583788..584690 Methylobacterium extorquens CM4 7117836 YP_002419445.1 CDS Mchl_0595 NC_011757.1 584695 585738 D KEGG: mex:Mext_0584 sulfate ABC transporter ATPase subunit; TIGRFAM: sulfate ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA; sulfate ABC transporter ATPase 584695..585738 Methylobacterium extorquens CM4 7117837 YP_002419446.1 CDS Mchl_0596 NC_011757.1 592203 592724 R KEGG: mex:Mext_0585 hypothetical protein; hypothetical protein complement(592203..592724) Methylobacterium extorquens CM4 7117844 YP_002419447.1 CDS Mchl_0597 NC_011757.1 592856 593557 D KEGG: mex:Mext_0586 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; endonuclease III/Nth; endonuclease III 592856..593557 Methylobacterium extorquens CM4 7117845 YP_002419448.1 CDS Mchl_0598 NC_011757.1 593751 594545 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 593751..594545 Methylobacterium extorquens CM4 7117846 YP_002419449.1 CDS Mchl_0599 NC_011757.1 594552 596207 R PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0588 glycosyl transferase; family 2 glycosyl transferase complement(594552..596207) Methylobacterium extorquens CM4 7117847 YP_002419450.1 CDS Mchl_0600 NC_011757.1 596204 598258 R PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0589 glycosyl transferase; family 2 glycosyl transferase complement(596204..598258) Methylobacterium extorquens CM4 7117848 YP_002419451.1 CDS Mchl_0601 NC_011757.1 598317 598949 R KEGG: mex:Mext_0590 hypothetical protein; hypothetical protein complement(598317..598949) Methylobacterium extorquens CM4 7117849 YP_002419452.1 CDS Mchl_0602 NC_011757.1 599010 599552 R PFAM: invasion associated locus B family protein; KEGG: mex:Mext_0591 invasion associated locus B family protein; invasion associated locus B family protein complement(599010..599552) Methylobacterium extorquens CM4 7117850 YP_002419453.1 CDS Mchl_0603 NC_011757.1 599789 600208 D KEGG: mex:Mext_0592 hypothetical protein; hypothetical protein 599789..600208 Methylobacterium extorquens CM4 7117851 YP_002419454.1 CDS Mchl_0604 NC_011757.1 600296 601021 R PFAM: protein of unknown function DUF45; KEGG: mex:Mext_0593 hypothetical protein; hypothetical protein complement(600296..601021) Methylobacterium extorquens CM4 7117852 YP_002419455.1 CDS Mchl_0605 NC_011757.1 601117 602361 R TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mex:Mext_0594 polyhydroxyalkanoate depolymerase, intracellular; polyhydroxyalkanoate depolymerase, intracellular complement(601117..602361) Methylobacterium extorquens CM4 7117853 YP_002419456.1 CDS Mchl_0606 NC_011757.1 602507 603901 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0595 ATPase domain-containing protein; histidine kinase 602507..603901 Methylobacterium extorquens CM4 7117854 YP_002419457.1 CDS Mchl_0607 NC_011757.1 603938 604540 D PFAM: response regulator receiver; KEGG: mex:Mext_0596 response regulator receiver; response regulator receiver protein 603938..604540 Methylobacterium extorquens CM4 7117855 YP_002419458.1 CDS Mchl_0608 NC_011757.1 604722 604946 D KEGG: mex:Mext_0597 hypothetical protein; hypothetical protein 604722..604946 Methylobacterium extorquens CM4 7117856 YP_002419459.1 CDS Mchl_0609 NC_011757.1 605138 605377 D TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: mex:Mext_0598 phosphoribosylformylglycinamidine synthase, PurS; phosphoribosylformylglycinamidine synthase PurS 605138..605377 Methylobacterium extorquens CM4 7117857 YP_002419460.1 CDS Mchl_0610 NC_011757.1 605377 606057 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 605377..606057 Methylobacterium extorquens CM4 7117858 YP_002419461.1 CDS Mchl_0611 NC_011757.1 606182 606727 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(606182..606727) Methylobacterium extorquens CM4 7117859 YP_002419462.1 CDS Mchl_0612 NC_011757.1 606808 607602 R PFAM: inositol monophosphatase; KEGG: mex:Mext_0601 inositol-phosphate phosphatase; inositol-phosphate phosphatase complement(606808..607602) Methylobacterium extorquens CM4 7117860 YP_002419463.1 CDS Mchl_0613 NC_011757.1 607886 608503 R PFAM: thiamine monophosphate synthase; KEGG: mex:Mext_0602 thiamine monophosphate synthase; thiamine monophosphate synthase complement(607886..608503) Methylobacterium extorquens CM4 7117861 YP_002419464.1 CDS Mchl_0614 NC_011757.1 608510 609331 R PFAM: thiazole biosynthesis protein; KEGG: mex:Mext_0603 thiazole biosynthesis protein; thiazole biosynthesis protein complement(608510..609331) Methylobacterium extorquens CM4 7115430 YP_002419465.1 CDS Mchl_0615 NC_011757.1 609334 609546 R TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: mex:Mext_0604 thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS complement(609334..609546) Methylobacterium extorquens CM4 7115431 YP_002419466.1 CDS Mchl_0616 NC_011757.1 609543 610778 R TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: mex:Mext_0605 glycine oxidase ThiO; glycine oxidase ThiO complement(609543..610778) Methylobacterium extorquens CM4 7115432 YP_002419467.1 CDS Mchl_0617 NC_011757.1 611103 612377 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_0606 adenylyl cyclase class-3/4/guanylyl cyclase; adenylate/guanylate cyclase complement(611103..612377) Methylobacterium extorquens CM4 7115433 YP_002419468.1 CDS Mchl_0618 NC_011757.1 612674 613042 D KEGG: mex:Mext_0607 hypothetical protein; hypothetical protein 612674..613042 Methylobacterium extorquens CM4 7115434 YP_002419469.1 CDS Mchl_0619 NC_011757.1 613334 614338 D SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_0608 helix-turn-helix domain-containing protein; AraC family transcriptional regulator 613334..614338 Methylobacterium extorquens CM4 7115435 YP_002419470.1 CDS Mchl_0620 NC_011757.1 614347 615690 D PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_0609 major facilitator transporter; major facilitator superfamily protein 614347..615690 Methylobacterium extorquens CM4 7115436 YP_002419471.1 CDS Mchl_0621 NC_011757.1 615735 617735 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD complement(615735..617735) Methylobacterium extorquens CM4 7115437 YP_002419472.1 CDS dnaG NC_011757.1 617937 619862 R synthesizes RNA primers at the replication forks; DNA primase complement(617937..619862) Methylobacterium extorquens CM4 7115438 YP_002419473.1 CDS Mchl_0623 NC_011757.1 619997 620983 D PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: mex:Mext_0612 gluconolactonase; gluconolactonase 619997..620983 Methylobacterium extorquens CM4 7115439 YP_002419474.1 CDS Mchl_0624 NC_011757.1 620980 622146 D PFAM: major royal jelly protein; KEGG: mex:Mext_0613 hypothetical protein; hypothetical protein 620980..622146 Methylobacterium extorquens CM4 7115440 YP_002419475.1 CDS Mchl_0625 NC_011757.1 622335 622793 R KEGG: mex:Mext_0614 GatB/YqeY; GatB/YqeY complement(622335..622793) Methylobacterium extorquens CM4 7115441 YP_002419476.1 CDS Mchl_0626 NC_011757.1 622983 624233 D TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; carbamoyl-phosphate synthase small chain; KEGG: mex:Mext_0615 carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase, small subunit 622983..624233 Methylobacterium extorquens CM4 7115442 YP_002419477.1 CDS Mchl_0627 NC_011757.1 624371 624745 D KEGG: mex:Mext_0616 hypothetical protein; hypothetical protein 624371..624745 Methylobacterium extorquens CM4 7115443 YP_002419478.1 CDS Mchl_0628 NC_011757.1 624786 627461 R KEGG: mex:Mext_0617 hypothetical protein; hypothetical protein complement(624786..627461) Methylobacterium extorquens CM4 7115444 YP_002419479.1 CDS flgB NC_011757.1 627619 628008 D with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella; flagellar basal body rod protein FlgB 627619..628008 Methylobacterium extorquens CM4 7115445 YP_002419480.1 CDS flgC NC_011757.1 628005 628421 D with FlgF and B makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod protein FlgC 628005..628421 Methylobacterium extorquens CM4 7115446 YP_002419481.1 CDS Mchl_0631 NC_011757.1 628435 628788 D PFAM: flagellar hook-basal body complex protein FliE; KEGG: mex:Mext_0620 flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex protein FliE 628435..628788 Methylobacterium extorquens CM4 7115447 YP_002419482.1 CDS flgG NC_011757.1 628881 629669 D makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod protein FlgG 628881..629669 Methylobacterium extorquens CM4 7115448 YP_002419483.1 CDS Mchl_0633 NC_011757.1 629735 630229 D TIGRFAM: flagella basal body P-ring formation protein FlgA; KEGG: mex:Mext_0622 FlgA, flagellar basal-body P-ring formation protein; flagella basal body P-ring formation protein FlgA 629735..630229 Methylobacterium extorquens CM4 7115449 YP_002419484.1 CDS flgI NC_011757.1 630226 631353 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar basal body P-ring protein 630226..631353 Methylobacterium extorquens CM4 7115450 YP_002419485.1 CDS Mchl_0635 NC_011757.1 631353 631937 D KEGG: mex:Mext_0624 hypothetical protein; hypothetical protein 631353..631937 Methylobacterium extorquens CM4 7115451 YP_002419486.1 CDS Mchl_0636 NC_011757.1 631937 632644 D PFAM: flagellar L-ring protein; KEGG: mex:Mext_0625 flagellar L-ring protein; flagellar L-ring protein 631937..632644 Methylobacterium extorquens CM4 7115452 YP_002419487.1 CDS Mchl_0637 NC_011757.1 632727 633209 D PFAM: flagellar basal body-associated protein FliL; KEGG: mex:Mext_0626 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 632727..633209 Methylobacterium extorquens CM4 7115453 YP_002419488.1 CDS fliP NC_011757.1 633206 633988 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagellum; flagellar biosynthesis protein FliP 633206..633988 Methylobacterium extorquens CM4 7115454 YP_002419489.1 CDS Mchl_0639 NC_011757.1 634150 634380 R KEGG: mex:Mext_0628 hypothetical protein; hypothetical protein complement(634150..634380) Methylobacterium extorquens CM4 7115455 YP_002419490.1 CDS fliF NC_011757.1 634494 636173 D the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 634494..636173 Methylobacterium extorquens CM4 7115456 YP_002419491.1 CDS Mchl_0641 NC_011757.1 636173 636898 D KEGG: mex:Mext_0630 hypothetical protein; hypothetical protein 636173..636898 Methylobacterium extorquens CM4 7115457 YP_002419492.1 CDS Mchl_0642 NC_011757.1 636900 638288 D PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_0631 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 636900..638288 Methylobacterium extorquens CM4 7115458 YP_002419493.1 CDS Mchl_0643 NC_011757.1 638285 639667 D a periplasmic protein that interacts with and stabilizes MotB; in Rhizobium, interactions between MotB and MotC at the periplasmic surface of the motor control the energy flux or the energy coupling that drives flagellar rotation; chemotaxis protein 638285..639667 Methylobacterium extorquens CM4 7115459 YP_002419494.1 CDS Mchl_0644 NC_011757.1 639707 641524 D KEGG: mex:Mext_0633 hypothetical protein; hypothetical protein 639707..641524 Methylobacterium extorquens CM4 7115460 YP_002419495.1 CDS Mchl_0645 NC_011757.1 641478 642146 D PFAM: lytic transglycosylase catalytic; KEGG: mex:Mext_0634 lytic transglycosylase catalytic; lytic transglycosylase 641478..642146 Methylobacterium extorquens CM4 7115461 YP_002419496.1 CDS Mchl_0646 NC_011757.1 642236 642937 R PFAM: transcriptional regulator; KEGG: mex:Mext_0635 transcriptional regulator domain-containing protein; transcriptional regulator complement(642236..642937) Methylobacterium extorquens CM4 7115462 YP_002419497.1 CDS Mchl_0647 NC_011757.1 643159 643605 R KEGG: mex:Mext_0636 hypothetical protein; hypothetical protein complement(643159..643605) Methylobacterium extorquens CM4 7115463 YP_002419498.1 CDS flhB NC_011757.1 643602 644663 R membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar biosynthesis protein FlhB complement(643602..644663) Methylobacterium extorquens CM4 7115464 YP_002419499.1 CDS Mchl_0649 NC_011757.1 644707 645786 R PFAM: flagellar motor switch protein FliG; KEGG: mex:Mext_0638 flagellar motor switch protein FliG; flagellar motor switch protein FliG complement(644707..645786) Methylobacterium extorquens CM4 7115465 YP_002419500.1 CDS Mchl_0650 NC_011757.1 645809 646135 R TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: mex:Mext_0639 flagellar motor switch protein FliN; flagellar motor switch protein FliN complement(645809..646135) Methylobacterium extorquens CM4 7115466 YP_002419501.1 CDS Mchl_0651 NC_011757.1 646336 646608 D KEGG: mex:Mext_0640 hypothetical protein; hypothetical protein 646336..646608 Methylobacterium extorquens CM4 7115467 YP_002419502.1 CDS Mchl_0652 NC_011757.1 646622 646918 R KEGG: mex:Mext_0641 hypothetical protein; hypothetical protein complement(646622..646918) Methylobacterium extorquens CM4 7115468 YP_002419503.1 CDS Mchl_0653 NC_011757.1 646902 647924 R PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: mex:Mext_0642 flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein complement(646902..647924) Methylobacterium extorquens CM4 7115469 YP_002419504.1 CDS Mchl_0654 NC_011757.1 647939 648814 R KEGG: mex:Mext_0643 chemotaxis MotA protein; chemotaxis MotA protein complement(647939..648814) Methylobacterium extorquens CM4 7115470 YP_002419505.1 CDS Mchl_0655 NC_011757.1 649013 649573 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 649013..649573 Methylobacterium extorquens CM4 7115471 YP_002419506.1 CDS hslU NC_011757.1 649684 650997 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 649684..650997 Methylobacterium extorquens CM4 7115472 YP_002419507.1 CDS Mchl_0657 NC_011757.1 651000 651890 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_0646 hypothetical protein; hypothetical protein 651000..651890 Methylobacterium extorquens CM4 7115473 YP_002419508.1 CDS Mchl_0658 NC_011757.1 651924 652985 R KEGG: mex:Mext_0647 hypothetical protein; hypothetical protein complement(651924..652985) Methylobacterium extorquens CM4 7115474 YP_002419509.1 CDS Mchl_0659 NC_011757.1 653035 654120 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: mex:Mext_0648 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein complement(653035..654120) Methylobacterium extorquens CM4 7115475 YP_002419510.1 CDS Mchl_0660 NC_011757.1 654485 654949 R KEGG: mex:Mext_0649 hypothetical protein; hypothetical protein complement(654485..654949) Methylobacterium extorquens CM4 7115476 YP_002419511.1 CDS Mchl_0661 NC_011757.1 655290 655511 D KEGG: mex:Mext_0650 hypothetical protein; hypothetical protein 655290..655511 Methylobacterium extorquens CM4 7115477 YP_002419512.1 CDS Mchl_0662 NC_011757.1 655530 657092 D KEGG: mex:Mext_0651 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA; signal recognition particle protein 655530..657092 Methylobacterium extorquens CM4 7115478 YP_002419513.1 CDS Mchl_0663 NC_011757.1 657089 657436 D TIGRFAM: chorismate mutase; PFAM: chorismate mutase; KEGG: mex:Mext_0652 chorismate mutase; chorismate mutase 657089..657436 Methylobacterium extorquens CM4 7115479 YP_002419514.1 CDS rpsP NC_011757.1 657436 657798 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 657436..657798 Methylobacterium extorquens CM4 7115480 YP_002419515.1 CDS rimM NC_011757.1 657923 658594 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 657923..658594 Methylobacterium extorquens CM4 7115481 YP_002419516.1 CDS Mchl_0666 NC_011757.1 658602 659396 R KEGG: mex:Mext_0655 hypothetical protein; hypothetical protein complement(658602..659396) Methylobacterium extorquens CM4 7115482 YP_002419517.1 CDS Mchl_0667 NC_011757.1 659465 660196 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_0656 methyltransferase type 11; type 11 methyltransferase complement(659465..660196) Methylobacterium extorquens CM4 7115483 YP_002419518.1 CDS Mchl_0668 NC_011757.1 660306 660623 D KEGG: mex:Mext_0657 hypothetical protein; hypothetical protein 660306..660623 Methylobacterium extorquens CM4 7115484 YP_002419519.1 CDS Mchl_0669 NC_011757.1 660733 661455 D KEGG: mex:Mext_0658 tRNA (guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 660733..661455 Methylobacterium extorquens CM4 7115485 YP_002419520.1 CDS Mchl_0670 NC_011757.1 661629 662804 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 661629..662804 Methylobacterium extorquens CM4 7115486 YP_002419521.1 CDS Mchl_0671 NC_011757.1 662669 662944 R hypothetical protein complement(662669..662944) Methylobacterium extorquens CM4 7115487 YP_002419522.1 CDS Mchl_0672 NC_011757.1 662962 664569 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 662962..664569 Methylobacterium extorquens CM4 7115488 YP_002419523.1 CDS Mchl_0673 NC_011757.1 664694 664897 D PFAM: Domain of unknown function DUF1902; KEGG: mex:Mext_0661 hypothetical protein; hypothetical protein 664694..664897 Methylobacterium extorquens CM4 7115489 YP_002419524.1 CDS Mchl_0674 NC_011757.1 665040 666137 D KEGG: mex:Mext_0662 aIF-2BI family translation initiation factor; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; translation initiation factor, aIF-2BI family 665040..666137 Methylobacterium extorquens CM4 7115490 YP_002419525.1 CDS Mchl_0675 NC_011757.1 666149 666496 R KEGG: mex:Mext_0663 DNA-binding protein; DNA-binding protein complement(666149..666496) Methylobacterium extorquens CM4 7115491 YP_002419526.1 CDS Mchl_0676 NC_011757.1 666562 667980 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mex:Mext_0664 MATE efflux family protein; MATE efflux family protein complement(666562..667980) Methylobacterium extorquens CM4 7115492 YP_002419527.1 CDS Mchl_0677 NC_011757.1 668006 669862 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_0665 ABC transporter; ABC transporter complement(668006..669862) Methylobacterium extorquens CM4 7115493 YP_002419528.1 CDS Mchl_0678 NC_011757.1 669988 670437 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mex:Mext_0666 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 669988..670437 Methylobacterium extorquens CM4 7115494 YP_002419529.1 CDS Mchl_0679 NC_011757.1 670684 672381 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0667 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 670684..672381 Methylobacterium extorquens CM4 7115495 YP_002419530.1 CDS Mchl_0680 NC_011757.1 672644 673783 D PFAM: PspA/IM30 family protein; KEGG: mex:Mext_0668 PspA/IM30 family protein; phage shock protein PspA 672644..673783 Methylobacterium extorquens CM4 7115496 YP_002419531.1 CDS Mchl_0681 NC_011757.1 673780 674448 D PFAM: protein of unknown function DUF1449; KEGG: mex:Mext_0669 hypothetical protein; hypothetical protein 673780..674448 Methylobacterium extorquens CM4 7115497 YP_002419532.1 CDS Mchl_0682 NC_011757.1 674486 676192 D PFAM: band 7 protein; KEGG: rec:RHECIAT_CH0003358 hypothetical protein; band 7 protein 674486..676192 Methylobacterium extorquens CM4 7115498 YP_002419533.1 CDS Mchl_0683 NC_011757.1 676385 678571 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_0672 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 676385..678571 Methylobacterium extorquens CM4 7115499 YP_002419534.1 CDS Mchl_0684 NC_011757.1 678615 679538 D catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 678615..679538 Methylobacterium extorquens CM4 7115500 YP_002419535.1 CDS Mchl_0685 NC_011757.1 679586 680707 D KEGG: mex:Mext_0674 deoxyribonuclease; deoxyribonuclease 679586..680707 Methylobacterium extorquens CM4 7115501 YP_002419536.1 CDS Mchl_0686 NC_011757.1 680858 682135 R KEGG: mex:Mext_0675 aspartate aminotransferase; GntR family transcriptional regulator complement(680858..682135) Methylobacterium extorquens CM4 7115502 YP_002419537.1 CDS Mchl_0687 NC_011757.1 682520 683200 D PFAM: transcriptional regulator; KEGG: mex:Mext_0676 transcriptional regulator domain-containing protein; transcriptional regulator 682520..683200 Methylobacterium extorquens CM4 7115503 YP_002419538.1 CDS Mchl_0689 NC_011757.1 685227 685526 R PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_0678 type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(685227..685526) Methylobacterium extorquens CM4 7115505 YP_002419539.1 CDS Mchl_0690 NC_011757.1 685729 686298 D KEGG: mex:Mext_0679 hypothetical protein; hypothetical protein 685729..686298 Methylobacterium extorquens CM4 7115506 YP_002419540.1 CDS Mchl_0691 NC_011757.1 686471 687724 D PFAM: protein of unknown function DUF1217; KEGG: mex:Mext_0680 hypothetical protein; hypothetical protein 686471..687724 Methylobacterium extorquens CM4 7115507 YP_002419541.1 CDS Mchl_0692 NC_011757.1 687730 688458 D PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mex:Mext_0681 flagellar basal body rod protein; flagellar basal body rod protein 687730..688458 Methylobacterium extorquens CM4 7115508 YP_002419542.1 CDS fliI NC_011757.1 688463 689791 D involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 688463..689791 Methylobacterium extorquens CM4 7115509 YP_002419543.1 CDS flgE NC_011757.1 689874 691085 D the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 689874..691085 Methylobacterium extorquens CM4 7115510 YP_002419544.1 CDS flgK NC_011757.1 691164 692627 D with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 691164..692627 Methylobacterium extorquens CM4 7115511 YP_002419545.1 CDS flgL NC_011757.1 692635 693687 D with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar hook-associated protein FlgL 692635..693687 Methylobacterium extorquens CM4 7118014 YP_002419546.1 CDS flaF NC_011757.1 693728 694078 D acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis regulatory protein FlaF 693728..694078 Methylobacterium extorquens CM4 7116550 YP_002419547.1 CDS flbT NC_011757.1 694089 694610 D post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis repressor FlbT 694089..694610 Methylobacterium extorquens CM4 7116551 YP_002419548.1 CDS flgD NC_011757.1 694617 695033 D acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod modification protein 694617..695033 Methylobacterium extorquens CM4 7116552 YP_002419549.1 CDS fliQ NC_011757.1 695164 695430 D FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar biosynthesis protein FliQ 695164..695430 Methylobacterium extorquens CM4 7116553 YP_002419550.1 CDS flhA NC_011757.1 695761 697842 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 695761..697842 Methylobacterium extorquens CM4 7116554 YP_002419551.1 CDS fliR NC_011757.1 697839 698609 D FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium has one thick and several thin flagella; the Bradyrhizobium protein in this cluster are associated with the thin flagella; flagellar biosynthesis protein FliR 697839..698609 Methylobacterium extorquens CM4 7116555 YP_002419552.1 CDS Mchl_0703 NC_011757.1 698615 699025 D KEGG: mex:Mext_0692 hypothetical protein; hypothetical protein 698615..699025 Methylobacterium extorquens CM4 7116556 YP_002419553.1 CDS Mchl_0704 NC_011757.1 699101 699583 D KEGG: mex:Mext_0693 hypothetical protein; hypothetical protein 699101..699583 Methylobacterium extorquens CM4 7116557 YP_002419554.1 CDS Mchl_0705 NC_011757.1 699589 699921 D KEGG: mex:Mext_0694 hypothetical protein; hypothetical protein 699589..699921 Methylobacterium extorquens CM4 7116558 YP_002419555.1 CDS Mchl_0706 NC_011757.1 699925 700371 D KEGG: mex:Mext_0695 hypothetical protein; hypothetical protein 699925..700371 Methylobacterium extorquens CM4 7116559 YP_002419556.1 CDS Mchl_0707 NC_011757.1 700467 701360 D PFAM: dihydrodipicolinate synthetase; KEGG: mex:Mext_0696 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 700467..701360 Methylobacterium extorquens CM4 7116560 YP_002419557.1 CDS Mchl_0708 NC_011757.1 701462 702448 D KEGG: mex:Mext_0697 hypothetical protein; hypothetical protein 701462..702448 Methylobacterium extorquens CM4 7116561 YP_002419558.1 CDS Mchl_0709 NC_011757.1 702464 702805 R PFAM: protein of unknown function DUF1491; KEGG: mex:Mext_0698 hypothetical protein; hypothetical protein complement(702464..702805) Methylobacterium extorquens CM4 7116562 YP_002419559.1 CDS Mchl_0710 NC_011757.1 702901 703653 R PFAM: peptidoglycan-binding protein; KEGG: mex:Mext_0699 peptidoglycan binding domain-containing protein; peptidoglycan-binding protein complement(702901..703653) Methylobacterium extorquens CM4 7116563 YP_002419560.1 CDS Mchl_0711 NC_011757.1 703697 705637 R KEGG: mex:Mext_0700 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(703697..705637) Methylobacterium extorquens CM4 7116564 YP_002419561.1 CDS Mchl_0712 NC_011757.1 706016 706348 D KEGG: mex:Mext_0701 hypothetical protein; hypothetical protein 706016..706348 Methylobacterium extorquens CM4 7116565 YP_002419562.1 CDS Mchl_0713 NC_011757.1 706499 707542 D TIGRFAM: cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: mex:Mext_0702 cytochrome d ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 706499..707542 Methylobacterium extorquens CM4 7116566 YP_002419563.1 CDS Mchl_0714 NC_011757.1 707539 707637 D KEGG: mpo:Mpop_0676 hypothetical protein; hypothetical protein 707539..707637 Methylobacterium extorquens CM4 7116567 YP_002419564.1 CDS Mchl_0715 NC_011757.1 707651 707776 R hypothetical protein complement(707651..707776) Methylobacterium extorquens CM4 7116568 YP_002419565.1 CDS Mchl_0716 NC_011757.1 707773 709002 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_0703 major facilitator transporter; major facilitator superfamily protein complement(707773..709002) Methylobacterium extorquens CM4 7116569 YP_002419566.1 CDS Mchl_0717 NC_011757.1 709062 710279 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_0704 major facilitator transporter; major facilitator superfamily protein complement(709062..710279) Methylobacterium extorquens CM4 7116570 YP_002419567.1 CDS Mchl_0718 NC_011757.1 710387 710887 D PFAM: helix-turn-helix HxlR type; KEGG: mex:Mext_0705 helix-turn-helix HxlR type; HxlR family transcriptional regulator 710387..710887 Methylobacterium extorquens CM4 7116571 YP_002419568.1 CDS Mchl_0719 NC_011757.1 711138 713630 D KEGG: mex:Mext_0706 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein, 1A family 711138..713630 Methylobacterium extorquens CM4 7116572 YP_002419569.1 CDS Mchl_0720 NC_011757.1 713837 715534 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0707 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 713837..715534 Methylobacterium extorquens CM4 7116573 YP_002419570.1 CDS Mchl_0721 NC_011757.1 715648 717135 R Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase complement(715648..717135) Methylobacterium extorquens CM4 7116574 YP_002419571.1 CDS Mchl_0722 NC_011757.1 717317 717823 D PFAM: protein of unknown function UPF0066; KEGG: mex:Mext_0709 hypothetical protein; hypothetical protein 717317..717823 Methylobacterium extorquens CM4 7116575 YP_002419572.1 CDS Mchl_0723 NC_011757.1 717843 719198 R KEGG: mex:Mext_0710 cellulose biosynthesis protein CelD; cellulose biosynthesis protein CelD complement(717843..719198) Methylobacterium extorquens CM4 7116576 YP_002419573.1 CDS Mchl_0724 NC_011757.1 719362 720432 R PFAM: protein of unknown function DUF201; KEGG: mex:Mext_0711 hypothetical protein; hypothetical protein complement(719362..720432) Methylobacterium extorquens CM4 7116577 YP_002419574.1 CDS Mchl_0725 NC_011757.1 720676 721107 R PFAM: protein of unknown function DUF1810; KEGG: mex:Mext_0712 hypothetical protein; hypothetical protein complement(720676..721107) Methylobacterium extorquens CM4 7116578 YP_002419575.1 CDS Mchl_0726 NC_011757.1 721169 722062 R PFAM: histone deacetylase superfamily; KEGG: mex:Mext_0713 histone deacetylase superfamily protein; histone deacetylase superfamily protein complement(721169..722062) Methylobacterium extorquens CM4 7116579 YP_002419576.1 CDS Mchl_0727 NC_011757.1 722178 723362 D KEGG: mex:Mext_0714 ceramide glucosyltransferase; ceramide glucosyltransferase 722178..723362 Methylobacterium extorquens CM4 7116580 YP_002419577.1 CDS Mchl_0728 NC_011757.1 723864 725411 D KEGG: mex:Mext_0715 chromosome segregation ATPase-like protein; chromosome segregation ATPase-like protein 723864..725411 Methylobacterium extorquens CM4 7116581 YP_002419578.1 CDS Mchl_0729 NC_011757.1 725468 725959 D KEGG: mex:Mext_0716 hypothetical protein; hypothetical protein 725468..725959 Methylobacterium extorquens CM4 7116582 YP_002419579.1 CDS Mchl_0730 NC_011757.1 725977 726483 D KEGG: mex:Mext_0717 hypothetical protein; hypothetical protein 725977..726483 Methylobacterium extorquens CM4 7116583 YP_002419580.1 CDS Mchl_0731 NC_011757.1 726701 728077 D TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: mex:Mext_0718 ethanolamine transproter; ethanolamine transporter 726701..728077 Methylobacterium extorquens CM4 7116584 YP_002419581.1 CDS Mchl_0732 NC_011757.1 728284 729210 R PFAM: fatty acid desaturase; KEGG: mex:Mext_0719 fatty acid desaturase; fatty acid desaturase complement(728284..729210) Methylobacterium extorquens CM4 7116585 YP_002419582.1 CDS Mchl_0733 NC_011757.1 729300 729620 D PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: mex:Mext_0720 regulatory protein ArsR; ArsR family transcriptional regulator 729300..729620 Methylobacterium extorquens CM4 7116586 YP_002419583.1 CDS Mchl_0734 NC_011757.1 730227 730928 D PFAM: glutamine amidotransferase class-I; KEGG: mex:Mext_0721 glutamine amidotransferase class-I; class I glutamine amidotransferase 730227..730928 Methylobacterium extorquens CM4 7116587 YP_002419584.1 CDS Mchl_0735 NC_011757.1 730930 731946 R PFAM: aldo/keto reductase; KEGG: mex:Mext_0722 aldo/keto reductase; aldo/keto reductase complement(730930..731946) Methylobacterium extorquens CM4 7116588 YP_002419585.1 CDS Mchl_0736 NC_011757.1 732095 733006 D PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator; KEGG: mex:Mext_0723 AraC-like transcriptional regulator; AraC family transcriptional regulator 732095..733006 Methylobacterium extorquens CM4 7116589 YP_002419586.1 CDS Mchl_0738 NC_011757.1 734698 735279 D KEGG: mex:Mext_0725 DedA family protein; DedA family protein 734698..735279 Methylobacterium extorquens CM4 7116592 YP_002419587.1 CDS Mchl_0739 NC_011757.1 735276 735800 D PFAM: disulfide bond formation protein DsbB; KEGG: mex:Mext_0726 disulphide bond formation protein DsbB; disulfide bond formation protein DsbB 735276..735800 Methylobacterium extorquens CM4 7116593 YP_002419588.1 CDS Mchl_0740 NC_011757.1 735764 736381 R PFAM: ParB-like nuclease; KEGG: mex:Mext_0727 ParB-like nuclease; ParB-like nuclease complement(735764..736381) Methylobacterium extorquens CM4 7116594 YP_002419589.1 CDS Mchl_0741 NC_011757.1 736764 737954 D PFAM: acyltransferase 3; KEGG: mex:Mext_0728 acyltransferase 3; acyltransferase 3 736764..737954 Methylobacterium extorquens CM4 7116595 YP_002419590.1 CDS Mchl_0742 NC_011757.1 737970 738392 R PFAM: protein of unknown function DUF55; KEGG: mex:Mext_0729 hypothetical protein; hypothetical protein complement(737970..738392) Methylobacterium extorquens CM4 7116596 YP_002419591.1 CDS gpsA NC_011757.1 738494 739507 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(738494..739507) Methylobacterium extorquens CM4 7116597 YP_002419592.1 CDS Mchl_0745 NC_011757.1 740400 741539 D KEGG: mex:Mext_0731 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; hypothetical protein; SMART: PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 740400..741539 Methylobacterium extorquens CM4 7116599 YP_002419593.1 CDS Mchl_0746 NC_011757.1 741556 742599 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease complement(741556..742599) Methylobacterium extorquens CM4 7116600 YP_002419594.1 CDS Mchl_0747 NC_011757.1 742777 743487 D KEGG: mex:Mext_0733 uroporphyrinogen III synthase HEM4; uroporphyrinogen III synthase HEM4 742777..743487 Methylobacterium extorquens CM4 7116601 YP_002419595.1 CDS Mchl_0748 NC_011757.1 743643 745931 D KEGG: mex:Mext_0734 hypothetical protein; hypothetical protein 743643..745931 Methylobacterium extorquens CM4 7116602 YP_002419596.1 CDS Mchl_0749 NC_011757.1 746049 747584 D PFAM: HemY domain protein; KEGG: mex:Mext_0735 HemY domain-containing protein; HemY domain-containing protein 746049..747584 Methylobacterium extorquens CM4 7116603 YP_002419597.1 CDS Mchl_0750 NC_011757.1 748223 748504 D KEGG: mex:Mext_0807 hypothetical protein; hypothetical protein 748223..748504 Methylobacterium extorquens CM4 7116605 YP_002419598.1 CDS Mchl_0751 NC_011757.1 748535 748765 R KEGG: mex:Mext_0808 hypothetical protein; hypothetical protein complement(748535..748765) Methylobacterium extorquens CM4 7116606 YP_002419599.1 CDS Mchl_0752 NC_011757.1 749239 751389 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0809 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 749239..751389 Methylobacterium extorquens CM4 7116607 YP_002419600.1 CDS Mchl_0753 NC_011757.1 751513 752163 D KEGG: mex:Mext_0810 hypothetical protein; hypothetical protein 751513..752163 Methylobacterium extorquens CM4 7116608 YP_002419601.1 CDS Mchl_0754 NC_011757.1 753248 755392 D PFAM: helicase; KEGG: mex:Mext_0811 helicase domain-containing protein; helicase 753248..755392 Methylobacterium extorquens CM4 7116609 YP_002419602.1 CDS Mchl_0755 NC_011757.1 761781 762950 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: mex:Mext_1007 NADH dehydrogenase; NADH dehydrogenase (ubiquinone) complement(761781..762950) Methylobacterium extorquens CM4 7116616 YP_002419603.1 CDS Mchl_0756 NC_011757.1 763202 763870 R KEGG: mex:Mext_1008 hypothetical protein; hypothetical protein complement(763202..763870) Methylobacterium extorquens CM4 7116617 YP_002419604.1 CDS Mchl_0757 NC_011757.1 764113 765282 D PFAM: proton/sugar symporter LacY; major facilitator superfamily MFS_1; KEGG: mex:Mext_1009 major facilitator transporter; major facilitator superfamily protein 764113..765282 Methylobacterium extorquens CM4 7116618 YP_002419605.1 CDS Mchl_0758 NC_011757.1 765366 767543 D binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 765366..767543 Methylobacterium extorquens CM4 7116619 YP_002419606.1 CDS Mchl_0759 NC_011757.1 767628 767990 D KEGG: mex:Mext_1011 hypothetical protein; hypothetical protein 767628..767990 Methylobacterium extorquens CM4 7116620 YP_002419607.1 CDS Mchl_0760 NC_011757.1 768080 768460 R KEGG: mex:Mext_1012 hypothetical protein; hypothetical protein complement(768080..768460) Methylobacterium extorquens CM4 7116621 YP_002419608.1 CDS Mchl_0761 NC_011757.1 768882 769133 R KEGG: mex:Mext_1013 hypothetical protein; hypothetical protein complement(768882..769133) Methylobacterium extorquens CM4 7116622 YP_002419609.1 CDS Mchl_0762 NC_011757.1 769251 770261 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1014 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(769251..770261) Methylobacterium extorquens CM4 7116623 YP_002419610.1 CDS Mchl_0763 NC_011757.1 770407 771018 R PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1015 isochorismatase hydrolase; isochorismatase hydrolase complement(770407..771018) Methylobacterium extorquens CM4 7116624 YP_002419611.1 CDS Mchl_0764 NC_011757.1 771051 772223 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_1016 alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein complement(771051..772223) Methylobacterium extorquens CM4 7116625 YP_002419612.1 CDS Mchl_0765 NC_011757.1 772353 773006 R KEGG: mex:Mext_1017 hypothetical protein; hypothetical protein complement(772353..773006) Methylobacterium extorquens CM4 7116626 YP_002419613.1 CDS Mchl_0766 NC_011757.1 773182 774039 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1018 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 773182..774039 Methylobacterium extorquens CM4 7116627 YP_002419614.1 CDS Mchl_0767 NC_011757.1 774107 775099 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1019 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 774107..775099 Methylobacterium extorquens CM4 7116628 YP_002419615.1 CDS Mchl_0768 NC_011757.1 775182 775361 D KEGG: mex:Mext_1020 hypothetical protein; hypothetical protein 775182..775361 Methylobacterium extorquens CM4 7116629 YP_002419616.1 CDS Mchl_0769 NC_011757.1 775499 777130 R PFAM: ABC transporter; KEGG: mex:Mext_1021 hypothetical protein; ABC transporter complement(775499..777130) Methylobacterium extorquens CM4 7116630 YP_002419617.1 CDS Mchl_0770 NC_011757.1 777291 777770 R KEGG: mex:Mext_1022 hypothetical protein; hypothetical protein complement(777291..777770) Methylobacterium extorquens CM4 7115676 YP_002419618.1 CDS Mchl_0771 NC_011757.1 783659 784378 D KEGG:.; hypothetical protein 783659..784378 Methylobacterium extorquens CM4 7115764 YP_002419619.1 CDS Mchl_0772 NC_011757.1 784861 787176 D PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: mex:Mext_0813 RNA-binding S1 domain-containing protein; RNA binding S1 domain-containing protein 784861..787176 Methylobacterium extorquens CM4 7115765 YP_002419620.1 CDS Mchl_0773 NC_011757.1 787163 787471 R KEGG: mex:Mext_0814 hypothetical protein; hypothetical protein complement(787163..787471) Methylobacterium extorquens CM4 7115766 YP_002419621.1 CDS Mchl_0774 NC_011757.1 788030 788683 D PFAM: ABC transporter; KEGG: mex:Mext_0815 ABC transporter related; ABC transporter 788030..788683 Methylobacterium extorquens CM4 7115767 YP_002419622.1 CDS Mchl_0775 NC_011757.1 788833 790077 D KEGG: mex:Mext_0816 capsule polysaccharide export protein-like protein; capsule polysaccharide export protein-like protein 788833..790077 Methylobacterium extorquens CM4 7115768 YP_002419623.1 CDS Mchl_0776 NC_011757.1 790086 790802 R KEGG: mex:Mext_0817 hypothetical protein; hypothetical protein complement(790086..790802) Methylobacterium extorquens CM4 7115769 YP_002419624.1 CDS Mchl_0777 NC_011757.1 790840 791148 R KEGG: mex:Mext_0818 hypothetical protein; hypothetical protein complement(790840..791148) Methylobacterium extorquens CM4 7115770 YP_002419625.1 CDS flhA NC_011757.1 791349 793490 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 791349..793490 Methylobacterium extorquens CM4 7115771 YP_002419626.1 CDS Mchl_0779 NC_011757.1 793746 795422 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: mex:Mext_0820 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor 793746..795422 Methylobacterium extorquens CM4 7115772 YP_002419627.1 CDS Mchl_0780 NC_011757.1 795574 795714 R KEGG: mpo:Mpop_0742 hypothetical protein; hypothetical protein complement(795574..795714) Methylobacterium extorquens CM4 7115773 YP_002419628.1 CDS Mchl_0781 NC_011757.1 795947 796999 R KEGG: mex:Mext_0821 hypothetical protein; hypothetical protein complement(795947..796999) Methylobacterium extorquens CM4 7115774 YP_002419629.1 CDS Mchl_0782 NC_011757.1 797356 797760 R TIGRFAM: flagellar export protein FliJ; KEGG: mex:Mext_0822 flagellar export protein FliJ; flagellar export protein FliJ complement(797356..797760) Methylobacterium extorquens CM4 7115775 YP_002419630.1 CDS fliI NC_011757.1 797856 799211 R involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase complement(797856..799211) Methylobacterium extorquens CM4 7115776 YP_002419631.1 CDS Mchl_0784 NC_011757.1 799650 800351 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0824 response regulator receiver; transcriptional regulator 799650..800351 Methylobacterium extorquens CM4 7115777 YP_002419632.1 CDS Mchl_0785 NC_011757.1 800428 800679 R KEGG: mex:Mext_0825 hypothetical protein; hypothetical protein complement(800428..800679) Methylobacterium extorquens CM4 7115778 YP_002419633.1 CDS Mchl_0786 NC_011757.1 800713 801339 R KEGG: mex:Mext_0826 chloramphenicol acetyltransferase; chloramphenicol acetyltransferase complement(800713..801339) Methylobacterium extorquens CM4 7115779 YP_002419634.1 CDS Mchl_0787 NC_011757.1 801415 803748 D NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 801415..803748 Methylobacterium extorquens CM4 7115780 YP_002419635.1 CDS Mchl_0788 NC_011757.1 803851 805290 D PFAM: acetamidase/formamidase; KEGG: mex:Mext_0828 acetamidase/formamidase; acetamidase/formamidase 803851..805290 Methylobacterium extorquens CM4 7115781 YP_002419636.1 CDS Mchl_0789 NC_011757.1 805464 805643 R KEGG: mex:Mext_0829 hypothetical protein; hypothetical protein complement(805464..805643) Methylobacterium extorquens CM4 7115782 YP_002419637.1 CDS Mchl_0790 NC_011757.1 805723 806607 R KEGG: mex:Mext_0830 hypothetical protein; hypothetical protein complement(805723..806607) Methylobacterium extorquens CM4 7115783 YP_002419638.1 CDS Mchl_0791 NC_011757.1 806604 808679 R PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: mex:Mext_0831 glycosyl transferase; family 2 glycosyl transferase complement(806604..808679) Methylobacterium extorquens CM4 7115784 YP_002419639.1 CDS Mchl_0792 NC_011757.1 808683 810704 R KEGG: mex:Mext_0832 hypothetical protein; hypothetical protein complement(808683..810704) Methylobacterium extorquens CM4 7115785 YP_002419640.1 CDS Mchl_0793 NC_011757.1 810704 811393 R KEGG: mex:Mext_0833 hypothetical protein; hypothetical protein complement(810704..811393) Methylobacterium extorquens CM4 7115786 YP_002419641.1 CDS Mchl_0794 NC_011757.1 811589 812974 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mex:Mext_0834 hypothetical protein; hypothetical protein complement(811589..812974) Methylobacterium extorquens CM4 7115787 YP_002419642.1 CDS Mchl_0795 NC_011757.1 813263 813787 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_0835 2Fe-2S iron-sulfur cluster binding domain-containing protein; (2Fe-2S)-binding domain-containing protein 813263..813787 Methylobacterium extorquens CM4 7115788 YP_002419643.1 CDS Mchl_0796 NC_011757.1 813784 814800 D PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mex:Mext_0836 molybdopterin dehydrogenase FAD-binding; FAD-binding molybdopterin dehydrogenase 813784..814800 Methylobacterium extorquens CM4 7115789 YP_002419644.1 CDS Mchl_0797 NC_011757.1 814810 817071 D PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_0837 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 814810..817071 Methylobacterium extorquens CM4 7115790 YP_002419645.1 CDS Mchl_0798 NC_011757.1 817348 817716 D TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: mpo:Mpop_0761 CrcB protein; CrcB protein 817348..817716 Methylobacterium extorquens CM4 7115791 YP_002419646.1 CDS Mchl_0799 NC_011757.1 817728 818165 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_0839 hypothetical protein; hypothetical protein 817728..818165 Methylobacterium extorquens CM4 7115792 YP_002419647.1 CDS Mchl_0800 NC_011757.1 818165 818827 D PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: mex:Mext_0840 peptidase M15D VanX D-ala-D-ala dipeptidase; peptidase M15D vanX D-ala-D-ala dipeptidase 818165..818827 Methylobacterium extorquens CM4 7115793 YP_002419648.1 CDS Mchl_0801 NC_011757.1 818996 819271 D KEGG: mex:Mext_0841 hypothetical protein; hypothetical protein 818996..819271 Methylobacterium extorquens CM4 7115794 YP_002419649.1 CDS Mchl_0802 NC_011757.1 819268 819594 D KEGG: mex:Mext_0842 hypothetical protein; hypothetical protein 819268..819594 Methylobacterium extorquens CM4 7115795 YP_002419650.1 CDS Mchl_0803 NC_011757.1 819712 820353 R PFAM: regulatory protein MarR; KEGG: mex:Mext_0844 regulatory protein MarR; MarR family transcriptional regulator complement(819712..820353) Methylobacterium extorquens CM4 7115796 YP_002419651.1 CDS Mchl_0804 NC_011757.1 820600 822777 D PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0845 glycosyl transferase; family 2 glycosyl transferase 820600..822777 Methylobacterium extorquens CM4 7115797 YP_002419652.1 CDS Mchl_0805 NC_011757.1 822809 823576 D TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: nucleotidyl transferase; KEGG: mex:Mext_0846 glucose-1-phosphate cytidylyltransferase; glucose-1-phosphate cytidylyltransferase 822809..823576 Methylobacterium extorquens CM4 7115798 YP_002419653.1 CDS Mchl_0806 NC_011757.1 823576 824670 D TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: mex:Mext_0847 CDP-glucose 4,6-dehydratase; CDP-glucose 4,6-dehydratase 823576..824670 Methylobacterium extorquens CM4 7115799 YP_002419654.1 CDS Mchl_0807 NC_011757.1 824667 825896 D PFAM: methyltransferase type 11; methyltransferase type 12; methyltransferase domain protein; C-methyltransferase; KEGG: mex:Mext_0848 C-methyltransferase; C-methyltransferase 824667..825896 Methylobacterium extorquens CM4 7115800 YP_002419655.1 CDS Mchl_0808 NC_011757.1 826081 826614 D PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: mex:Mext_0849 dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase 826081..826614 Methylobacterium extorquens CM4 7115801 YP_002419656.1 CDS Mchl_0809 NC_011757.1 826611 827651 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: mex:Mext_0850 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 826611..827651 Methylobacterium extorquens CM4 7115802 YP_002419657.1 CDS Mchl_0810 NC_011757.1 827626 828024 R PFAM: response regulator receiver; KEGG: mex:Mext_0851 response regulator receiver; response regulator receiver protein complement(827626..828024) Methylobacterium extorquens CM4 7115803 YP_002419658.1 CDS Mchl_0811 NC_011757.1 828276 829526 R TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: mex:Mext_0852 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(828276..829526) Methylobacterium extorquens CM4 7115804 YP_002419659.1 CDS Mchl_0812 NC_011757.1 829722 832568 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase complement(829722..832568) Methylobacterium extorquens CM4 7115805 YP_002419660.1 CDS Mchl_0813 NC_011757.1 832742 833104 R part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H complement(832742..833104) Methylobacterium extorquens CM4 7115806 YP_002419661.1 CDS Mchl_0814 NC_011757.1 833131 834309 R TIGRFAM: glycine cleavage system protein T; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel; KEGG: mex:Mext_0855 glycine cleavage system protein T; glycine cleavage system protein T complement(833131..834309) Methylobacterium extorquens CM4 7115807 YP_002419662.1 CDS Mchl_0815 NC_011757.1 834618 834848 R KEGG: mex:Mext_0856 hypothetical protein; hypothetical protein complement(834618..834848) Methylobacterium extorquens CM4 7115808 YP_002419663.1 CDS Mchl_0816 NC_011757.1 834955 836106 D KEGG: mex:Mext_0857 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class V; aminotransferase class I and II; 8-amino-7-oxononanoate synthase 834955..836106 Methylobacterium extorquens CM4 7115809 YP_002419664.1 CDS Mchl_0817 NC_011757.1 836113 836973 R PFAM: NLP/P60 protein; KEGG: mex:Mext_0858 NLP/P60 protein; NLP/P60 protein complement(836113..836973) Methylobacterium extorquens CM4 7115810 YP_002419665.1 CDS Mchl_0818 NC_011757.1 837286 837657 D KEGG: mex:Mext_0859 hypothetical protein; hypothetical protein 837286..837657 Methylobacterium extorquens CM4 7115811 YP_002419666.1 CDS Mchl_0819 NC_011757.1 837718 838404 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_0860 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(837718..838404) Methylobacterium extorquens CM4 7115812 YP_002419667.1 CDS Mchl_0820 NC_011757.1 838467 839183 R PFAM: MgtC/SapB transporter; KEGG: mex:Mext_0861 MgtC/SapB transporter; MgtC/SapB transporter complement(838467..839183) Methylobacterium extorquens CM4 7115813 YP_002419668.1 CDS Mchl_0821 NC_011757.1 839475 840467 D PFAM: ATPase associated with various cellular activities AAA_3; ATPase AAA; KEGG: mex:Mext_0862 ATPase; ATPase AAA 839475..840467 Methylobacterium extorquens CM4 7115814 YP_002419669.1 CDS Mchl_0822 NC_011757.1 840473 841402 D KEGG: mex:Mext_0863 hypothetical protein; hypothetical protein 840473..841402 Methylobacterium extorquens CM4 7115815 YP_002419670.1 CDS Mchl_0824 NC_011757.1 841577 842038 D KEGG: mex:Mext_0864 hypothetical protein; hypothetical protein 841577..842038 Methylobacterium extorquens CM4 7115817 YP_002419671.1 CDS Mchl_0825 NC_011757.1 842044 843063 D PFAM: von Willebrand factor type A; KEGG: mex:Mext_0865 von Willebrand factor type A; von Willebrand factor type A 842044..843063 Methylobacterium extorquens CM4 7115818 YP_002419672.1 CDS Mchl_0826 NC_011757.1 843075 843998 D PFAM: von Willebrand factor type A; KEGG: mex:Mext_0866 von Willebrand factor type A; von Willebrand factor type A 843075..843998 Methylobacterium extorquens CM4 7115819 YP_002419673.1 CDS Mchl_0827 NC_011757.1 843998 844936 D PFAM: hypotheticalprotein; Tetratricopeptide TPR_2 repeat protein; KEGG: mex:Mext_0867 hypotheticalprotein; hypothetical protein 843998..844936 Methylobacterium extorquens CM4 7115820 YP_002419674.1 CDS Mchl_0828 NC_011757.1 844936 846252 D KEGG: mex:Mext_0868 hypothetical protein; hypothetical protein 844936..846252 Methylobacterium extorquens CM4 7115821 YP_002419675.1 CDS Mchl_0829 NC_011757.1 846340 847434 D KEGG: mex:Mext_0869 hypothetical protein; hypothetical protein 846340..847434 Methylobacterium extorquens CM4 7115822 YP_002419676.1 CDS Mchl_0830 NC_011757.1 847526 848527 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_0870 hypothetical protein; hypothetical protein 847526..848527 Methylobacterium extorquens CM4 7115823 YP_002419677.1 CDS Mchl_0831 NC_011757.1 848538 848828 R KEGG: mex:Mext_0871 hypothetical protein; hypothetical protein complement(848538..848828) Methylobacterium extorquens CM4 7115824 YP_002419678.1 CDS Mchl_0832 NC_011757.1 849097 850152 R KEGG: mex:Mext_0872 hypothetical protein; hypothetical protein complement(849097..850152) Methylobacterium extorquens CM4 7115825 YP_002419679.1 CDS Mchl_0833 NC_011757.1 850398 850814 R TIGRFAM: methionine-R-sulfoxide reductase; PFAM: methionine sulfoxide reductase B; KEGG: mex:Mext_0873 methionine-R-sulfoxide reductase; methionine-R-sulfoxide reductase complement(850398..850814) Methylobacterium extorquens CM4 7115826 YP_002419680.1 CDS Mchl_0834 NC_011757.1 850918 852084 R PFAM: ribonuclease BN; KEGG: mex:Mext_0874 ribonuclease BN; ribonuclease BN complement(850918..852084) Methylobacterium extorquens CM4 7115827 YP_002419681.1 CDS Mchl_0835 NC_011757.1 852217 853683 R KEGG: mex:Mext_0875 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase complement(852217..853683) Methylobacterium extorquens CM4 7115828 YP_002419682.1 CDS Mchl_0836 NC_011757.1 853888 855420 R catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase complement(853888..855420) Methylobacterium extorquens CM4 7115829 YP_002419683.1 CDS Mchl_0837 NC_011757.1 855564 856004 R KEGG: mex:Mext_0877 hypothetical protein; hypothetical protein complement(855564..856004) Methylobacterium extorquens CM4 7115830 YP_002419684.1 CDS Mchl_0838 NC_011757.1 856345 857238 D PFAM: Collagen triple helix repeat; KEGG: mex:Mext_0878 triple helix repeat-containing collagen; collagen 856345..857238 Methylobacterium extorquens CM4 7115831 YP_002419685.1 CDS Mchl_0839 NC_011757.1 857251 858474 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; KEGG: mex:Mext_0879 hypothetical protein; hypothetical protein complement(857251..858474) Methylobacterium extorquens CM4 7115832 YP_002419686.1 CDS Mchl_0840 NC_011757.1 858789 859814 D PFAM: integral membrane protein TerC; KEGG: mex:Mext_0880 integral membrane protein TerC; integral membrane protein TerC 858789..859814 Methylobacterium extorquens CM4 7115833 YP_002419687.1 CDS Mchl_0841 NC_011757.1 859956 860258 D KEGG: mex:Mext_0881 hypothetical protein; hypothetical protein 859956..860258 Methylobacterium extorquens CM4 7115834 YP_002419688.1 CDS Mchl_0842 NC_011757.1 860335 860913 R TIGRFAM: intracellular protease PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_0882 PfpI family intracellular peptidase; intracellular protease PfpI family complement(860335..860913) Methylobacterium extorquens CM4 7115835 YP_002419689.1 CDS Mchl_0843 NC_011757.1 861097 861318 D KEGG: mex:Mext_0883 hypothetical protein; hypothetical protein 861097..861318 Methylobacterium extorquens CM4 7115836 YP_002419690.1 CDS Mchl_0844 NC_011757.1 861494 861928 D KEGG: mex:Mext_0884 hypothetical protein; hypothetical protein 861494..861928 Methylobacterium extorquens CM4 7115837 YP_002419691.1 CDS Mchl_0845 NC_011757.1 861987 862376 R KEGG: mex:Mext_0885 hypothetical protein; hypothetical protein complement(861987..862376) Methylobacterium extorquens CM4 7115838 YP_002419692.1 CDS Mchl_0846 NC_011757.1 862722 862931 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_0886 cold-shock protein DNA-binding; cold-shock DNA-binding domain-containing protein 862722..862931 Methylobacterium extorquens CM4 7115842 YP_002419693.1 CDS Mchl_0847 NC_011757.1 863139 863366 D KEGG: mex:Mext_0887 hypothetical protein; hypothetical protein 863139..863366 Methylobacterium extorquens CM4 7115924 YP_002419694.1 CDS Mchl_0848 NC_011757.1 863536 863976 R PFAM: conserved hypothetical protein; KEGG: mex:Mext_0888 hypothetical protein; hypothetical protein complement(863536..863976) Methylobacterium extorquens CM4 7115925 YP_002419695.1 CDS Mchl_0849 NC_011757.1 864080 865279 R KEGG: mex:Mext_0889 hypothetical protein; hypothetical protein complement(864080..865279) Methylobacterium extorquens CM4 7115926 YP_002419696.1 CDS Mchl_0850 NC_011757.1 865448 866653 D PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_0890 major facilitator transporter; major facilitator superfamily protein 865448..866653 Methylobacterium extorquens CM4 7115927 YP_002419697.1 CDS Mchl_0851 NC_011757.1 866899 868044 D PFAM: protein of unknown function DUF140; KEGG: mex:Mext_0891 hypothetical protein; hypothetical protein 866899..868044 Methylobacterium extorquens CM4 7115928 YP_002419698.1 CDS Mchl_0852 NC_011757.1 868079 868915 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_0892 ABC transporter; ABC transporter 868079..868915 Methylobacterium extorquens CM4 7115929 YP_002419699.1 CDS Mchl_0853 NC_011757.1 868987 870069 D PFAM: hypothetical protein; KEGG: mex:Mext_0893 hypothetical protein; hypothetical protein 868987..870069 Methylobacterium extorquens CM4 7115930 YP_002419700.1 CDS Mchl_0854 NC_011757.1 870190 870813 D PFAM: protein of unknown function DUF330; KEGG: mex:Mext_0894 hypothetical protein; hypothetical protein 870190..870813 Methylobacterium extorquens CM4 7115931 YP_002419701.1 CDS Mchl_0855 NC_011757.1 870857 871675 R PFAM: inositol monophosphatase; KEGG: mex:Mext_0895 inositol monophosphatase; inositol monophosphatase complement(870857..871675) Methylobacterium extorquens CM4 7115932 YP_002419702.1 CDS Mchl_0856 NC_011757.1 872040 872540 D KEGG: mex:Mext_0896 hypothetical protein; hypothetical protein 872040..872540 Methylobacterium extorquens CM4 7115933 YP_002419703.1 CDS Mchl_0857 NC_011757.1 872893 873843 R TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: mex:Mext_0897 4-hydroxybenzoate polyprenyl transferase; 4-hydroxybenzoate polyprenyl transferase complement(872893..873843) Methylobacterium extorquens CM4 7115934 YP_002419704.1 CDS Mchl_0858 NC_011757.1 873880 874482 R KEGG: mex:Mext_0898 signal peptide; signal peptide complement(873880..874482) Methylobacterium extorquens CM4 7115935 YP_002419705.1 CDS Mchl_0859 NC_011757.1 874790 875542 D PFAM: protein of unknown function DUF558; KEGG: mex:Mext_0899 hypothetical protein; hypothetical protein 874790..875542 Methylobacterium extorquens CM4 7115936 YP_002419706.1 CDS Mchl_0860 NC_011757.1 875572 876555 D PFAM: asparaginase/glutaminase; KEGG: mex:Mext_0900 asparaginase/glutaminase; asparaginase/glutaminase 875572..876555 Methylobacterium extorquens CM4 7115937 YP_002419707.1 CDS Mchl_0861 NC_011757.1 876742 878112 D KEGG: mex:Mext_0901 glutamate--cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase; glutamate/cysteine ligase 876742..878112 Methylobacterium extorquens CM4 7115938 YP_002419708.1 CDS Mchl_0862 NC_011757.1 878224 878634 D KEGG: mex:Mext_0902 hypothetical protein; hypothetical protein 878224..878634 Methylobacterium extorquens CM4 7115939 YP_002419709.1 CDS Mchl_0863 NC_011757.1 878714 878980 D PFAM: SirA family protein; KEGG: mex:Mext_0903 SirA family protein; SirA family protein 878714..878980 Methylobacterium extorquens CM4 7115940 YP_002419710.1 CDS Mchl_0864 NC_011757.1 879020 879586 D PFAM: NUDIX hydrolase; KEGG: mex:Mext_0904 NUDIX hydrolase; NUDIX hydrolase 879020..879586 Methylobacterium extorquens CM4 7115941 YP_002419711.1 CDS Mchl_0865 NC_011757.1 879684 879818 D KEGG: mpo:Mpop_0833 hypothetical protein; hypothetical protein 879684..879818 Methylobacterium extorquens CM4 7115942 YP_002419712.1 CDS Mchl_0866 NC_011757.1 880043 880441 D KEGG: mex:Mext_0905 hypothetical protein; hypothetical protein 880043..880441 Methylobacterium extorquens CM4 7115943 YP_002419713.1 CDS Mchl_0867 NC_011757.1 880592 881032 R KEGG: mex:Mext_0906 hypothetical protein; hypothetical protein complement(880592..881032) Methylobacterium extorquens CM4 7115944 YP_002419714.1 CDS Mchl_0868 NC_011757.1 881278 881970 R KEGG: mex:Mext_0907 transmembrane signal peptide protein; transmembrane signal peptide protein complement(881278..881970) Methylobacterium extorquens CM4 7115945 YP_002419715.1 CDS Mchl_0869 NC_011757.1 881967 882179 R PFAM: protein of unknown function DUF1289; KEGG: mex:Mext_0908 hypothetical protein; hypothetical protein complement(881967..882179) Methylobacterium extorquens CM4 7115946 YP_002419716.1 CDS Mchl_0870 NC_011757.1 882440 883117 R KEGG: mex:Mext_0909 hypothetical protein; hypothetical protein complement(882440..883117) Methylobacterium extorquens CM4 7115947 YP_002419717.1 CDS Mchl_0871 NC_011757.1 883132 883959 R TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: mex:Mext_0910 cobalamin 5'-phosphate synthase; cobalamin 5'-phosphate synthase complement(883132..883959) Methylobacterium extorquens CM4 7115948 YP_002419718.1 CDS Mchl_0872 NC_011757.1 884127 885164 D KEGG: mex:Mext_0911 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase 884127..885164 Methylobacterium extorquens CM4 7115949 YP_002419719.1 CDS Mchl_0873 NC_011757.1 885171 886712 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0912 ATPase domain-containing protein; histidine kinase complement(885171..886712) Methylobacterium extorquens CM4 7115950 YP_002419720.1 CDS Mchl_0874 NC_011757.1 887055 887510 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_0913 2Fe-2S iron-sulfur cluster binding domain-containing protein; (2Fe-2S)-binding domain-containing protein 887055..887510 Methylobacterium extorquens CM4 7115951 YP_002419721.1 CDS Mchl_0875 NC_011757.1 887546 889741 D PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_0914 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 887546..889741 Methylobacterium extorquens CM4 7115952 YP_002419722.1 CDS Mchl_0876 NC_011757.1 889922 893320 D KEGG: mex:Mext_0915 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase 889922..893320 Methylobacterium extorquens CM4 7115953 YP_002419723.1 CDS Mchl_0877 NC_011757.1 893409 894644 R PFAM: amidase; KEGG: mex:Mext_0916 amidase; amidase complement(893409..894644) Methylobacterium extorquens CM4 7115954 YP_002419724.1 CDS Mchl_0878 NC_011757.1 894758 895747 D PFAM: Extensin family protein; KEGG: mex:Mext_0917 extensin family protein; Extensin family protein 894758..895747 Methylobacterium extorquens CM4 7115955 YP_002419725.1 CDS Mchl_0879 NC_011757.1 895928 896395 D KEGG: mex:Mext_0918 hypothetical protein; hypothetical protein 895928..896395 Methylobacterium extorquens CM4 7115956 YP_002419726.1 CDS Mchl_0880 NC_011757.1 896495 897169 D PFAM: ribonuclease T2; KEGG: mex:Mext_0919 ribonuclease T2; ribonuclease T2 896495..897169 Methylobacterium extorquens CM4 7115957 YP_002419727.1 CDS Mchl_0881 NC_011757.1 897223 898071 D PFAM: protein of unknown function DUF519; KEGG: mex:Mext_0920 hypothetical protein; hypothetical protein 897223..898071 Methylobacterium extorquens CM4 7115958 YP_002419728.1 CDS Mchl_0882 NC_011757.1 898088 898357 R KEGG: mex:Mext_0921 hypothetical protein; hypothetical protein complement(898088..898357) Methylobacterium extorquens CM4 7115959 YP_002419729.1 CDS Mchl_0883 NC_011757.1 898372 898605 R KEGG: mex:Mext_0922 hypothetical protein; hypothetical protein complement(898372..898605) Methylobacterium extorquens CM4 7115960 YP_002419730.1 CDS Mchl_0884 NC_011757.1 898708 900141 R PFAM: FAD linked oxidase; KEGG: mex:Mext_0923 FAD linked oxidase domain-containing protein; FAD linked oxidase complement(898708..900141) Methylobacterium extorquens CM4 7115961 YP_002419731.1 CDS Mchl_0885 NC_011757.1 900457 900819 D PFAM: cytochrome C class I; KEGG: mex:Mext_0924 cytochrome c class I; cytochrome C class I 900457..900819 Methylobacterium extorquens CM4 7115962 YP_002419732.1 CDS Mchl_0886 NC_011757.1 900916 901401 R PFAM: regulatory protein MarR; KEGG: mex:Mext_0925 regulatory protein MarR; MarR family transcriptional regulator complement(900916..901401) Methylobacterium extorquens CM4 7115963 YP_002419733.1 CDS Mchl_0887 NC_011757.1 901947 902552 R KEGG: mex:Mext_0926 hypothetical protein; hypothetical protein complement(901947..902552) Methylobacterium extorquens CM4 7115964 YP_002419734.1 CDS Mchl_0888 NC_011757.1 902549 903280 R PFAM: protein of unknown function DUF1214; KEGG: mex:Mext_0927 hypothetical protein; hypothetical protein complement(902549..903280) Methylobacterium extorquens CM4 7115965 YP_002419735.1 CDS Mchl_0889 NC_011757.1 903291 905588 R KEGG: mex:Mext_0928 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein, 1A family complement(903291..905588) Methylobacterium extorquens CM4 7115966 YP_002419736.1 CDS Mchl_0890 NC_011757.1 905899 906363 D PFAM: protein of unknown function UPF0153; KEGG: mex:Mext_0929 hypothetical protein; hypothetical protein 905899..906363 Methylobacterium extorquens CM4 7115967 YP_002419737.1 CDS Mchl_0891 NC_011757.1 906373 907029 R PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_0930 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(906373..907029) Methylobacterium extorquens CM4 7115968 YP_002419738.1 CDS Mchl_0892 NC_011757.1 907307 907858 D PFAM: TadE family protein; KEGG: mex:Mext_0931 TadE family protein; TadE family protein 907307..907858 Methylobacterium extorquens CM4 7115969 YP_002419739.1 CDS Mchl_0893 NC_011757.1 907858 908691 D KEGG: mex:Mext_0932 hypothetical protein; hypothetical protein 907858..908691 Methylobacterium extorquens CM4 7115970 YP_002419740.1 CDS Mchl_0894 NC_011757.1 908676 910109 D KEGG: mex:Mext_0933 hypothetical protein; hypothetical protein 908676..910109 Methylobacterium extorquens CM4 7115971 YP_002419741.1 CDS Mchl_0895 NC_011757.1 910368 911582 D PFAM: AFG1-family ATPase; KEGG: mex:Mext_0934 AFG1 family ATPase; AFG1-family ATPase 910368..911582 Methylobacterium extorquens CM4 7115972 YP_002419742.1 CDS Mchl_0896 NC_011757.1 911579 912205 R TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: mex:Mext_0935 DNA-3-methyladenine glycosylase; DNA-3-methyladenine glycosylase complement(911579..912205) Methylobacterium extorquens CM4 7115973 YP_002419743.1 CDS Mchl_0897 NC_011757.1 912278 912964 R PFAM: ribonuclease H; KEGG: mex:Mext_0936 ribonuclease H; ribonuclease H complement(912278..912964) Methylobacterium extorquens CM4 7115974 YP_002419744.1 CDS Mchl_0898 NC_011757.1 913017 913802 R KEGG: mex:Mext_0937 hypothetical protein; hypothetical protein complement(913017..913802) Methylobacterium extorquens CM4 7115975 YP_002419745.1 CDS Mchl_0899 NC_011757.1 913799 914050 R KEGG: mpo:Mpop_0874 hypothetical protein; hypothetical protein complement(913799..914050) Methylobacterium extorquens CM4 7115976 YP_002419746.1 CDS Mchl_0900 NC_011757.1 914515 914823 D KEGG: mex:Mext_0938 hypothetical protein; hypothetical protein 914515..914823 Methylobacterium extorquens CM4 7115977 YP_002419747.1 CDS Mchl_0901 NC_011757.1 915124 916086 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 915124..916086 Methylobacterium extorquens CM4 7115978 YP_002419748.1 CDS Mchl_0902 NC_011757.1 916145 916300 R KEGG: mpo:Mpop_0877 hypothetical protein; hypothetical protein complement(916145..916300) Methylobacterium extorquens CM4 7115979 YP_002419749.1 CDS Mchl_0903 NC_011757.1 916958 918535 R PFAM: sodium/hydrogen exchanger; KEGG: mex:Mext_0940 sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(916958..918535) Methylobacterium extorquens CM4 7115980 YP_002419750.1 CDS Mchl_0904 NC_011757.1 918633 919385 R PFAM: peptidoglycan-binding protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: mex:Mext_0941 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD complement(918633..919385) Methylobacterium extorquens CM4 7115981 YP_002419751.1 CDS Mchl_0905 NC_011757.1 919382 920107 R PFAM: heat shock protein DnaJ domain protein; protein of unknown function DUF1332; KEGG: mex:Mext_0942 heat shock protein DnaJ domain-containing protein; hypothetical protein complement(919382..920107) Methylobacterium extorquens CM4 7115982 YP_002419752.1 CDS Mchl_0906 NC_011757.1 920309 921400 R KEGG: mpo:Mpop_0881 hypothetical protein; hypothetical protein complement(920309..921400) Methylobacterium extorquens CM4 7115983 YP_002419753.1 CDS Mchl_0907 NC_011757.1 921531 921683 D KEGG: mpo:Mpop_0883 hypothetical protein; hypothetical protein 921531..921683 Methylobacterium extorquens CM4 7115984 YP_002419754.1 CDS Mchl_0908 NC_011757.1 922010 922210 D KEGG: mpo:Mpop_0884 hypothetical protein; hypothetical protein 922010..922210 Methylobacterium extorquens CM4 7115985 YP_002419755.1 CDS Mchl_0909 NC_011757.1 922584 923606 D PFAM: dihydrouridine synthase; KEGG: mex:Mext_0946 tRNA-dihydrouridine synthase A; tRNA-dihydrouridine synthase A 922584..923606 Methylobacterium extorquens CM4 7115986 YP_002419756.1 CDS Mchl_0910 NC_011757.1 923646 925790 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_0947 diguanylate cyclase; diguanylate cyclase/phosphodiesterase complement(923646..925790) Methylobacterium extorquens CM4 7115987 YP_002419757.1 CDS Mchl_0911 NC_011757.1 926119 926571 R PFAM: response regulator receiver; KEGG: mex:Mext_0948 response regulator receiver; response regulator receiver protein complement(926119..926571) Methylobacterium extorquens CM4 7115988 YP_002419758.1 CDS Mchl_0912 NC_011757.1 926633 927100 R PFAM: BLUF domain protein; KEGG: mex:Mext_0949 BLUF domain-containing protein; BLUF domain-containing protein complement(926633..927100) Methylobacterium extorquens CM4 7115989 YP_002419759.1 CDS Mchl_0913 NC_011757.1 927334 928716 D PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: mex:Mext_0950 hypothetical protein; hypothetical protein 927334..928716 Methylobacterium extorquens CM4 7115990 YP_002419760.1 CDS Mchl_0914 NC_011757.1 928743 930641 D TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: mex:Mext_0951 flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 928743..930641 Methylobacterium extorquens CM4 7115991 YP_002419761.1 CDS Mchl_0915 NC_011757.1 930656 932449 D KEGG: mex:Mext_0952 hypothetical protein; hypothetical protein 930656..932449 Methylobacterium extorquens CM4 7115992 YP_002419762.1 CDS Mchl_0916 NC_011757.1 932549 933844 R KEGG: mex:Mext_0953 hypothetical protein; hypothetical protein complement(932549..933844) Methylobacterium extorquens CM4 7115993 YP_002419763.1 CDS Mchl_0917 NC_011757.1 934393 935283 R TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: mex:Mext_0954 protein-(glutamine-N5) methyltransferase, release factor-specific; HemK family modification methylase complement(934393..935283) Methylobacterium extorquens CM4 7115994 YP_002419764.1 CDS prfA NC_011757.1 935298 936383 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(935298..936383) Methylobacterium extorquens CM4 7115995 YP_002419765.1 CDS Mchl_0919 NC_011757.1 936578 937237 R KEGG: mex:Mext_0956 hypothetical protein; hypothetical protein complement(936578..937237) Methylobacterium extorquens CM4 7115996 YP_002419766.1 CDS Mchl_0920 NC_011757.1 937283 939544 R TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: mex:Mext_0957 phosphoenolpyruvate-protein phosphotransferase; PTSINtr with GAF domain, PtsP complement(937283..939544) Methylobacterium extorquens CM4 7115997 YP_002419767.1 CDS Mchl_0921 NC_011757.1 939616 940851 R KEGG: mex:Mext_0958 aspartate kinase; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase complement(939616..940851) Methylobacterium extorquens CM4 7115998 YP_002419768.1 CDS Mchl_0922 NC_011757.1 941219 941956 D KEGG: mex:Mext_0959 ubiquinone biosynthesis O-methyltransferase; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: methyltransferase type 11; methyltransferase type 12; ubiquinone biosynthesis O-methyltransferase 941219..941956 Methylobacterium extorquens CM4 7115999 YP_002419769.1 CDS Mchl_0923 NC_011757.1 942032 942604 D PFAM: PEBP family protein; KEGG: mex:Mext_0960 PEBP family protein; PEBP family protein 942032..942604 Methylobacterium extorquens CM4 7116000 YP_002419770.1 CDS Mchl_0924 NC_011757.1 942741 943721 D PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_0961 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 942741..943721 Methylobacterium extorquens CM4 7116001 YP_002419771.1 CDS ruvC NC_011757.1 943946 944515 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(943946..944515) Methylobacterium extorquens CM4 7116003 YP_002419772.1 CDS Mchl_0927 NC_011757.1 944605 945246 R PFAM: YceI family protein; KEGG: mex:Mext_0963 YceI family protein; YceI family protein complement(944605..945246) Methylobacterium extorquens CM4 7116004 YP_002419773.1 CDS ruvA NC_011757.1 945333 945959 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 945333..945959 Methylobacterium extorquens CM4 7114695 YP_002419774.1 CDS Mchl_0929 NC_011757.1 945976 946272 R KEGG: mex:Mext_0965 hypothetical protein; hypothetical protein complement(945976..946272) Methylobacterium extorquens CM4 7114696 YP_002419775.1 CDS Mchl_0930 NC_011757.1 946350 946730 D PFAM: response regulator receiver; KEGG: mpo:Mpop_0906 response regulator receiver protein; response regulator receiver protein 946350..946730 Methylobacterium extorquens CM4 7114697 YP_002419776.1 CDS Mchl_0931 NC_011757.1 946786 948159 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: mex:Mext_0967 diguanylate cyclase; response regulator receiver modulated diguanylate cyclase 946786..948159 Methylobacterium extorquens CM4 7114698 YP_002419777.1 CDS Mchl_0932 NC_011757.1 948177 948650 R TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mex:Mext_0968 rrf2 family transcriptional regulator; BadM/Rrf2 family transcriptional regulator complement(948177..948650) Methylobacterium extorquens CM4 7114699 YP_002419778.1 CDS Mchl_0933 NC_011757.1 948745 949989 D flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 948745..949989 Methylobacterium extorquens CM4 7114700 YP_002419779.1 CDS Mchl_0934 NC_011757.1 950017 950181 R KEGG: mex:Mext_0970 hypothetical protein; hypothetical protein complement(950017..950181) Methylobacterium extorquens CM4 7114701 YP_002419780.1 CDS Mchl_0935 NC_011757.1 950273 950599 R KEGG: mex:Mext_0971 hypothetical protein; hypothetical protein complement(950273..950599) Methylobacterium extorquens CM4 7114702 YP_002419781.1 CDS Mchl_0936 NC_011757.1 950589 950993 R KEGG: mex:Mext_0972 hypothetical protein; hypothetical protein complement(950589..950993) Methylobacterium extorquens CM4 7114703 YP_002419782.1 CDS Mchl_0937 NC_011757.1 951085 952065 R TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: mex:Mext_0973 cysteine synthase A; cysteine synthase A complement(951085..952065) Methylobacterium extorquens CM4 7114704 YP_002419783.1 CDS Mchl_0938 NC_011757.1 952422 952598 R KEGG: mex:Mext_0974 hypothetical protein; hypothetical protein complement(952422..952598) Methylobacterium extorquens CM4 7114705 YP_002419784.1 CDS Mchl_0939 NC_011757.1 952777 953280 R PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: mex:Mext_0975 protein of unknown function DUF306 MetA and HslJ; hypothetical protein complement(952777..953280) Methylobacterium extorquens CM4 7114706 YP_002419785.1 CDS Mchl_0940 NC_011757.1 953737 954015 D KEGG: mex:Mext_0976 hypothetical protein; hypothetical protein 953737..954015 Methylobacterium extorquens CM4 7114707 YP_002419786.1 CDS Mchl_0941 NC_011757.1 954025 955266 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_0977 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(954025..955266) Methylobacterium extorquens CM4 7114708 YP_002419787.1 CDS Mchl_0942 NC_011757.1 955263 956252 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_0978 LysR substrate-binding; LysR family transcriptional regulator complement(955263..956252) Methylobacterium extorquens CM4 7114709 YP_002419788.1 CDS Mchl_0943 NC_011757.1 956461 957507 D PFAM: inositol phosphatase/fructose-16-bisphosphatase; KEGG: mex:Mext_0979 inositol phosphatase/fructose-16-bisphosphatase; inositol phosphatase/fructose-16-bisphosphatase 956461..957507 Methylobacterium extorquens CM4 7114710 YP_002419789.1 CDS Mchl_0944 NC_011757.1 957655 958515 D PFAM: phosphoribulokinase/uridine kinase; KEGG: mex:Mext_0980 phosphoribulokinase; phosphoribulokinase 957655..958515 Methylobacterium extorquens CM4 7114711 YP_002419790.1 CDS Mchl_0945 NC_011757.1 958587 959546 R KEGG: mex:Mext_0981 hypothetical protein; hypothetical protein complement(958587..959546) Methylobacterium extorquens CM4 7114712 YP_002419791.1 CDS Mchl_0946 NC_011757.1 959660 960406 R PFAM: protein of unknown function DUF28; KEGG: mex:Mext_0982 hypothetical protein; hypothetical protein complement(959660..960406) Methylobacterium extorquens CM4 7114713 YP_002419792.1 CDS Mchl_0947 NC_011757.1 960894 961706 R KEGG: mex:Mext_0984 beta-lactamase-like protein; beta-lactamase-like protein complement(960894..961706) Methylobacterium extorquens CM4 7114714 YP_002419793.1 CDS Mchl_0948 NC_011757.1 962138 962452 D KEGG: mex:Mext_0985 hypothetical protein; hypothetical protein 962138..962452 Methylobacterium extorquens CM4 7114715 YP_002419794.1 CDS Mchl_0949 NC_011757.1 962476 963618 R KEGG: mex:Mext_0986 hypothetical protein; hypothetical protein complement(962476..963618) Methylobacterium extorquens CM4 7114716 YP_002419795.1 CDS Mchl_0950 NC_011757.1 963618 964994 R PFAM: polysaccharide biosynthesis protein; KEGG: mex:Mext_0987 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(963618..964994) Methylobacterium extorquens CM4 7114717 YP_002419796.1 CDS Mchl_0951 NC_011757.1 965113 966096 R KEGG: mex:Mext_0988 hypothetical protein; hypothetical protein complement(965113..966096) Methylobacterium extorquens CM4 7114718 YP_002419797.1 CDS Mchl_0952 NC_011757.1 966015 967154 R KEGG: mex:Mext_0989 OpgC protein; OpgC protein complement(966015..967154) Methylobacterium extorquens CM4 7114719 YP_002419798.1 CDS Mchl_0953 NC_011757.1 967344 968105 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: mex:Mext_0990 HAD family hydrolase; HAD-superfamily hydrolase complement(967344..968105) Methylobacterium extorquens CM4 7114720 YP_002419799.1 CDS Mchl_0954 NC_011757.1 968099 968782 R PFAM: ribulose-phosphate 3-epimerase; KEGG: mex:Mext_0991 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(968099..968782) Methylobacterium extorquens CM4 7114721 YP_002419800.1 CDS Mchl_0955 NC_011757.1 968972 969586 R PFAM: GCN5-related N-acetyltransferase; KEGG: mpo:Mpop_0933 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(968972..969586) Methylobacterium extorquens CM4 7114722 YP_002419801.1 CDS Mchl_0956 NC_011757.1 969586 971931 R PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: mex:Mext_0993 ornithine decarboxylase; ornithine decarboxylase complement(969586..971931) Methylobacterium extorquens CM4 7114723 YP_002419802.1 CDS Mchl_0957 NC_011757.1 972016 972336 R TIGRFAM: TonB family protein; KEGG: mex:Mext_0994 TonB family protein; TonB family protein complement(972016..972336) Methylobacterium extorquens CM4 7114724 YP_002419803.1 CDS Mchl_0958 NC_011757.1 972646 973203 R TIGRFAM: molybdenum cofactor synthesis protein; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: mex:Mext_0995 molybdenum cofactor biosynthesis protein B; molybdenum cofactor biosynthesis protein B complement(972646..973203) Methylobacterium extorquens CM4 7114725 YP_002419804.1 CDS Mchl_0959 NC_011757.1 973366 974673 D TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: mex:Mext_0996 adenylosuccinate lyase; adenylosuccinate lyase 973366..974673 Methylobacterium extorquens CM4 7114726 YP_002419805.1 CDS Mchl_0960 NC_011757.1 974731 975588 D PFAM: aminotransferase class IV; KEGG: mex:Mext_0997 aminotransferase class IV; class IV aminotransferase 974731..975588 Methylobacterium extorquens CM4 7114727 YP_002419806.1 CDS Mchl_0961 NC_011757.1 975661 975978 D KEGG: mex:Mext_0998 hypothetical protein; hypothetical protein 975661..975978 Methylobacterium extorquens CM4 7114728 YP_002419807.1 CDS Mchl_0962 NC_011757.1 976166 977458 D PFAM: adenylosuccinate synthetase; KEGG: mex:Mext_0999 adenylosuccinate synthase; adenylosuccinate synthase 976166..977458 Methylobacterium extorquens CM4 7114729 YP_002419808.1 CDS Mchl_0963 NC_011757.1 977500 978981 D KEGG: mex:Mext_1000 hypothetical protein; hypothetical protein 977500..978981 Methylobacterium extorquens CM4 7114730 YP_002419809.1 CDS Mchl_0964 NC_011757.1 979137 980030 R binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 complement(979137..980030) Methylobacterium extorquens CM4 7114731 YP_002419810.1 CDS Mchl_0965 NC_011757.1 980295 982301 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_1002 diguanylate cyclase; diguanylate cyclase/phosphodiesterase complement(980295..982301) Methylobacterium extorquens CM4 7114732 YP_002419811.1 CDS Mchl_0966 NC_011757.1 982736 983002 D KEGG: mex:Mext_1003 hypothetical protein; hypothetical protein 982736..983002 Methylobacterium extorquens CM4 7114733 YP_002419812.1 CDS Mchl_0967 NC_011757.1 983039 983488 R PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_1004 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(983039..983488) Methylobacterium extorquens CM4 7114734 YP_002419813.1 CDS Mchl_0968 NC_011757.1 983704 984735 R KEGG: mex:Mext_1005 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; pseudouridine synthase complement(983704..984735) Methylobacterium extorquens CM4 7114735 YP_002419814.1 CDS Mchl_0969 NC_011757.1 984732 986012 R PFAM: integrase family protein; KEGG: nwi:Nwi_0275 phage integrase; integrase family protein complement(984732..986012) Methylobacterium extorquens CM4 7114736 YP_002419815.1 CDS Mchl_0970 NC_011757.1 986560 987663 R PFAM: integrase family protein; KEGG: nwi:Nwi_0275 phage integrase; integrase family protein complement(986560..987663) Methylobacterium extorquens CM4 7114738 YP_002419816.1 CDS Mchl_0971 NC_011757.1 987654 987893 R KEGG: dsh:Dshi_0989 hypothetical protein; hypothetical protein complement(987654..987893) Methylobacterium extorquens CM4 7114739 YP_002419817.1 CDS Mchl_0972 NC_011757.1 988282 988968 R PFAM: helix-turn-helix domain protein; KEGG: gbe:GbCGDNIH1_1593 transcriptional repressor; XRE family transcriptional regulator complement(988282..988968) Methylobacterium extorquens CM4 7114740 YP_002419818.1 CDS Mchl_0973 NC_011757.1 988994 989695 R KEGG: LOC100075123; similar to splicing coactivator subunit SRm300; hypothetical protein complement(988994..989695) Methylobacterium extorquens CM4 7114741 YP_002419819.1 CDS Mchl_0974 NC_011757.1 989790 992003 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mrd:Mrad2831_4099 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(989790..992003) Methylobacterium extorquens CM4 7114742 YP_002419820.1 CDS Mchl_0975 NC_011757.1 992294 993259 D PFAM: esterase; KEGG: azc:AZC_3250 esterase; esterase 992294..993259 Methylobacterium extorquens CM4 7114743 YP_002419821.1 CDS Mchl_0976 NC_011757.1 994164 994613 D hypothetical protein 994164..994613 Methylobacterium extorquens CM4 7114744 YP_002419822.1 CDS Mchl_0977 NC_011757.1 994821 995648 D KEGG: mpo:Mpop_3836 hypothetical protein; hypothetical protein 994821..995648 Methylobacterium extorquens CM4 7114745 YP_002419823.1 CDS Mchl_0979 NC_011757.1 998569 1000605 D PFAM: Resolvase domain; Recombinase; KEGG: mpo:Mpop_3843 resolvase domain; Resolvase domain 998569..1000605 Methylobacterium extorquens CM4 7114747 YP_002419824.1 CDS Mchl_0980 NC_011757.1 1001033 1003156 D PFAM: Resolvase domain; KEGG: mpo:Mpop_3842 resolvase domain; Resolvase domain 1001033..1003156 Methylobacterium extorquens CM4 7114748 YP_002419825.1 CDS Mchl_0981 NC_011757.1 1003882 1004619 D hypothetical protein 1003882..1004619 Methylobacterium extorquens CM4 7114749 YP_002419826.1 CDS Mchl_0982 NC_011757.1 1004656 1005159 R KEGG: mrd:Mrad2831_5193 metallophosphoesterase; metallophosphoesterase complement(1004656..1005159) Methylobacterium extorquens CM4 7114750 YP_002419827.1 CDS Mchl_0983 NC_011757.1 1005311 1005553 D PFAM: helix-turn-helix domain protein; KEGG: pde:Pden_3837 helix-turn-helix domain protein; XRE family transcriptional regulator 1005311..1005553 Methylobacterium extorquens CM4 7114751 YP_002419828.1 CDS Mchl_0984 NC_011757.1 1006388 1007266 D KEGG: mpo:Mpop_3836 hypothetical protein; hypothetical protein 1006388..1007266 Methylobacterium extorquens CM4 7114752 YP_002419829.1 CDS Mchl_0985 NC_011757.1 1007263 1009314 D PFAM: peptidase M41; ATPase AAA central domain protein; SMART: ATPase AAA; KEGG: mpo:Mpop_3837 ATPase AAA central domain protein; ATPase AAA 1007263..1009314 Methylobacterium extorquens CM4 7114753 YP_002419830.1 CDS Mchl_0986 NC_011757.1 1009452 1009814 D KEGG: mpo:Mpop_3838 hypothetical protein; hypothetical protein 1009452..1009814 Methylobacterium extorquens CM4 7114754 YP_002419831.1 CDS Mchl_0990 NC_011757.1 1010977 1011327 R hypothetical protein complement(1010977..1011327) Methylobacterium extorquens CM4 7114758 YP_002419832.1 CDS Mchl_0991 NC_011757.1 1011978 1012403 R KEGG: art:Arth_0448 hypothetical protein; hypothetical protein complement(1011978..1012403) Methylobacterium extorquens CM4 7114759 YP_002419833.1 CDS Mchl_0993 NC_011757.1 1013224 1013691 D KEGG: mrd:Mrad2831_2532 hypothetical protein; hypothetical protein 1013224..1013691 Methylobacterium extorquens CM4 7114761 YP_002419834.1 CDS Mchl_0994 NC_011757.1 1013778 1015529 D TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: met:M446_0182 RND family efflux transporter MFP subunit; efflux transporter RND family MFP subunit 1013778..1015529 Methylobacterium extorquens CM4 7114762 YP_002419835.1 CDS Mchl_0995 NC_011757.1 1015542 1018688 D TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: met:M446_0181 CzcA family heavy metal efflux protein; CzcA family heavy metal efflux pump 1015542..1018688 Methylobacterium extorquens CM4 7114763 YP_002419836.1 CDS Mchl_0996 NC_011757.1 1018722 1019087 D KEGG: mrd:Mrad2831_2535 hypothetical protein; hypothetical protein 1018722..1019087 Methylobacterium extorquens CM4 7114764 YP_002419837.1 CDS Mchl_0997 NC_011757.1 1019110 1019556 D PFAM: protein of unknown function DUF305; KEGG: met:M446_0179 hypothetical protein; hypothetical protein 1019110..1019556 Methylobacterium extorquens CM4 7114765 YP_002419838.1 CDS Mchl_0998 NC_011757.1 1019748 1020080 D KEGG: mpo:Mpop_0107 hypothetical protein; hypothetical protein 1019748..1020080 Methylobacterium extorquens CM4 7114766 YP_002419839.1 CDS Mchl_0999 NC_011757.1 1020104 1020337 D KEGG: mpo:Mpop_4128 hypothetical protein; hypothetical protein 1020104..1020337 Methylobacterium extorquens CM4 7114767 YP_002419840.1 CDS Mchl_1000 NC_011757.1 1020503 1022932 D KEGG: met:M446_0177 heavy metal translocating P-type ATPase; TIGRFAM: ATPase P; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein; ATPase P 1020503..1022932 Methylobacterium extorquens CM4 7114768 YP_002419841.1 CDS Mchl_1001 NC_011757.1 1023006 1023167 D KEGG: mpo:Mpop_0104 hypothetical protein; hypothetical protein 1023006..1023167 Methylobacterium extorquens CM4 7114769 YP_002419842.1 CDS Mchl_1002 NC_011757.1 1023243 1023719 D PFAM: protein of unknown function DUF411; KEGG: mpo:Mpop_4113 protein of unknown function DUF411; hypothetical protein 1023243..1023719 Methylobacterium extorquens CM4 7114770 YP_002419843.1 CDS Mchl_1004 NC_011757.1 1025638 1027707 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mrd:Mrad2831_4063 TonB-dependent receptor plug; TonB-dependent receptor plug 1025638..1027707 Methylobacterium extorquens CM4 7114772 YP_002419844.1 CDS Mchl_1005 NC_011757.1 1027609 1027851 R hypothetical protein complement(1027609..1027851) Methylobacterium extorquens CM4 7114773 YP_002419845.1 CDS Mchl_1006 NC_011757.1 1028378 1028593 R KEGG: mpo:Mpop_4115 hypothetical protein; hypothetical protein complement(1028378..1028593) Methylobacterium extorquens CM4 7114774 YP_002419846.1 CDS Mchl_1007 NC_011757.1 1029161 1029463 R PFAM: protein of unknown function DUF156; KEGG: mpo:Mpop_2536 protein of unknown function DUF156; hypothetical protein complement(1029161..1029463) Methylobacterium extorquens CM4 7114775 YP_002419847.1 CDS Mchl_1008 NC_011757.1 1029858 1030121 D PFAM: Heavy metal transport/detoxification protein; KEGG: mpo:Mpop_2540 heavy metal transport/detoxification protein; Heavy metal transport/detoxification protein 1029858..1030121 Methylobacterium extorquens CM4 7114776 YP_002419848.1 CDS Mchl_1009 NC_011757.1 1030420 1031712 D KEGG: mpo:Mpop_2541 hypothetical protein; hypothetical protein 1030420..1031712 Methylobacterium extorquens CM4 7118512 YP_002419849.1 CDS Mchl_1010 NC_011757.1 1032163 1033620 D PFAM: Hemolysin-type calcium-binding region; KEGG: mpo:Mpop_2542 hemolysin-type calcium-binding region; hemolysin-type calcium-binding region 1032163..1033620 Methylobacterium extorquens CM4 7118513 YP_002419850.1 CDS Mchl_1011 NC_011757.1 1033613 1033870 R hypothetical protein complement(1033613..1033870) Methylobacterium extorquens CM4 7118514 YP_002419851.1 CDS Mchl_1012 NC_011757.1 1033921 1034805 R KEGG: mpo:Mpop_2553 hypothetical protein; hypothetical protein complement(1033921..1034805) Methylobacterium extorquens CM4 7118515 YP_002419852.1 CDS Mchl_1013 NC_011757.1 1034898 1035746 R PFAM: YHS domain protein; KEGG: mpo:Mpop_2554 heavy metal translocating P-type ATPase; YHS domain-containing protein complement(1034898..1035746) Methylobacterium extorquens CM4 7118516 YP_002419853.1 CDS Mchl_1014 NC_011757.1 1035834 1036586 R PFAM: lytic transglycosylase catalytic; KEGG: mpo:Mpop_2555 lytic transglycosylase catalytic; lytic transglycosylase complement(1035834..1036586) Methylobacterium extorquens CM4 7118517 YP_002419854.1 CDS Mchl_1015 NC_011757.1 1036725 1037129 R KEGG: mpo:Mpop_2577 hypothetical protein; hypothetical protein complement(1036725..1037129) Methylobacterium extorquens CM4 7118518 YP_002419855.1 CDS Mchl_1016 NC_011757.1 1037210 1037662 R KEGG: mpo:Mpop_2557 conserved hypothetical protein; exported protein; hypothetical protein complement(1037210..1037662) Methylobacterium extorquens CM4 7118519 YP_002419856.1 CDS Mchl_1018 NC_011757.1 1038324 1038794 R PFAM: protein of unknown function DUF411; KEGG: mpo:Mpop_2562 protein of unknown function DUF411; hypothetical protein complement(1038324..1038794) Methylobacterium extorquens CM4 7118521 YP_002419857.1 CDS Mchl_1019 NC_011757.1 1038850 1042014 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mpo:Mpop_2563 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux pump complement(1038850..1042014) Methylobacterium extorquens CM4 7118522 YP_002419858.1 CDS Mchl_1020 NC_011757.1 1042011 1043537 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mpo:Mpop_2564 efflux transporter RND family, MFP subunit; efflux transporter RND family MFP subunit complement(1042011..1043537) Methylobacterium extorquens CM4 7118523 YP_002419859.1 CDS Mchl_1021 NC_011757.1 1043537 1044085 R KEGG: mpo:Mpop_2565 hypothetical protein; hypothetical protein complement(1043537..1044085) Methylobacterium extorquens CM4 7118524 YP_002419860.1 CDS Mchl_1022 NC_011757.1 1044868 1045152 R KEGG: mpo:Mpop_2567 hypothetical protein; hypothetical protein complement(1044868..1045152) Methylobacterium extorquens CM4 7118525 YP_002419861.1 CDS Mchl_1023 NC_011757.1 1046011 1046283 D KEGG: mpo:Mpop_2571 hypothetical protein; hypothetical protein 1046011..1046283 Methylobacterium extorquens CM4 7118526 YP_002419862.1 CDS Mchl_1024 NC_011757.1 1046328 1046978 R PFAM: protein of unknown function DUF1109; KEGG: mpo:Mpop_2572 protein of unknown function DUF1109; hypothetical protein complement(1046328..1046978) Methylobacterium extorquens CM4 7118527 YP_002419863.1 CDS Mchl_1025 NC_011757.1 1046975 1047529 R Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor complement(1046975..1047529) Methylobacterium extorquens CM4 7118528 YP_002419864.1 CDS Mchl_1026 NC_011757.1 1047998 1048213 R hypothetical protein complement(1047998..1048213) Methylobacterium extorquens CM4 7118529 YP_002419865.1 CDS Mchl_1027 NC_011757.1 1048542 1048913 D PFAM: protein of unknown function DUF305; KEGG: mpo:Mpop_2575 hypothetical protein; hypothetical protein 1048542..1048913 Methylobacterium extorquens CM4 7118530 YP_002419866.1 CDS Mchl_1028 NC_011757.1 1050202 1050654 D KEGG: mpo:Mpop_2557 conserved hypothetical protein; exported protein; hypothetical protein 1050202..1050654 Methylobacterium extorquens CM4 7118531 YP_002419867.1 CDS Mchl_1029 NC_011757.1 1050735 1051139 D KEGG: mpo:Mpop_2577 hypothetical protein; hypothetical protein 1050735..1051139 Methylobacterium extorquens CM4 7118532 YP_002419868.1 CDS Mchl_1030 NC_011757.1 1051139 1052746 D KEGG: mpo:Mpop_2578 outer membrane efflux protein; outer membrane efflux protein 1051139..1052746 Methylobacterium extorquens CM4 7118533 YP_002419869.1 CDS Mchl_1031 NC_011757.1 1052779 1054200 D PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: mpo:Mpop_2579 multicopper oxidase type 3; multicopper oxidase type 3 1052779..1054200 Methylobacterium extorquens CM4 7118534 YP_002419870.1 CDS Mchl_1032 NC_011757.1 1054375 1054659 D KEGG: mpo:Mpop_2580 hypothetical protein; hypothetical protein 1054375..1054659 Methylobacterium extorquens CM4 7118535 YP_002419871.1 CDS Mchl_1033 NC_011757.1 1054731 1055435 D PFAM: protein of unknown function DUF305; KEGG: mpo:Mpop_2581 hypothetical protein; hypothetical protein 1054731..1055435 Methylobacterium extorquens CM4 7118536 YP_002419872.1 CDS Mchl_1034 NC_011757.1 1055541 1056179 D KEGG: mpo:Mpop_2582 cytochrome C family protein; cytochrome C family protein 1055541..1056179 Methylobacterium extorquens CM4 7118537 YP_002419873.1 CDS Mchl_1035 NC_011757.1 1056313 1056693 D KEGG: mpo:Mpop_2584 hypothetical protein; hypothetical protein 1056313..1056693 Methylobacterium extorquens CM4 7118538 YP_002419874.1 CDS Mchl_1037 NC_011757.1 1057056 1057343 D KEGG: hip:CGSHiEE_04655 hypothetical protein; hypothetical protein 1057056..1057343 Methylobacterium extorquens CM4 7118540 YP_002419875.1 CDS Mchl_1040 NC_011757.1 1058436 1059101 D KEGG: mrd:Mrad2831_6454 hypothetical protein; hypothetical protein 1058436..1059101 Methylobacterium extorquens CM4 7118543 YP_002419876.1 CDS Mchl_1041 NC_011757.1 1059302 1059658 D KEGG: rme:Rmet_3038 hypothetical protein; hypothetical protein 1059302..1059658 Methylobacterium extorquens CM4 7118544 YP_002419877.1 CDS Mchl_1042 NC_011757.1 1059655 1060446 D PFAM: MOFRL domain protein; KEGG: mpo:Mpop_4659 hydroxypyruvate reductase; hydroxypyruvate reductase 1059655..1060446 Methylobacterium extorquens CM4 7118545 YP_002419878.1 CDS Mchl_1043 NC_011757.1 1060471 1061898 D KEGG: mrd:Mrad2831_3358 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta; pyruvate kinase 1060471..1061898 Methylobacterium extorquens CM4 7118546 YP_002419879.1 CDS Mchl_1044 NC_011757.1 1062349 1062561 D KEGG: mpo:Mpop_1896 hypothetical protein; hypothetical protein 1062349..1062561 Methylobacterium extorquens CM4 7118547 YP_002419880.1 CDS Mchl_1045 NC_011757.1 1062609 1063355 R TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: mex:Mext_3863 arsenical resistance protein ArsH; arsenical resistance protein ArsH complement(1062609..1063355) Methylobacterium extorquens CM4 7118548 YP_002419881.1 CDS Mchl_1046 NC_011757.1 1063406 1063765 D SMART: regulatory protein ArsR; KEGG: mpo:Mpop_4055 ArsR family transcriptional regulator; ArsR family transcriptional regulator 1063406..1063765 Methylobacterium extorquens CM4 7118549 YP_002419882.1 CDS Mchl_1047 NC_011757.1 1063758 1064285 D PFAM: protein-tyrosine phosphatase, low molecular weight; KEGG: mpo:Mpop_4054 protein tyrosine phosphatase; protein-tyrosine phosphatase, low molecular weight 1063758..1064285 Methylobacterium extorquens CM4 7118550 YP_002419883.1 CDS Mchl_1048 NC_011757.1 1064285 1064710 D TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: mpo:Mpop_4053 arsenate reductase; arsenate reductase 1064285..1064710 Methylobacterium extorquens CM4 7118551 YP_002419884.1 CDS Mchl_1049 NC_011757.1 1064720 1065787 D TIGRFAM: arsenic resistance protein; PFAM: Bile acid:sodium symporter; KEGG: mpo:Mpop_4052 arsenic resistance protein; arsenic resistance protein 1064720..1065787 Methylobacterium extorquens CM4 7118552 YP_002419885.1 CDS Mchl_1050 NC_011757.1 1065777 1066952 D PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1916 major facilitator transporter; major facilitator superfamily protein 1065777..1066952 Methylobacterium extorquens CM4 7118553 YP_002419886.1 CDS Mchl_1051 NC_011757.1 1067140 1067412 D KEGG: bra:BRADO0700 hypothetical protein; hypothetical protein 1067140..1067412 Methylobacterium extorquens CM4 7118554 YP_002419887.1 CDS Mchl_1052 NC_011757.1 1067543 1070701 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: nha:Nham_2657 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 1067543..1070701 Methylobacterium extorquens CM4 7118555 YP_002419888.1 CDS Mchl_1054 NC_011757.1 1071109 1071384 D PFAM: transposase IS3/IS911 family protein; KEGG: mpo:Mpop_3816 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1071109..1071384 Methylobacterium extorquens CM4 7118557 YP_002419889.1 CDS Mchl_1055 NC_011757.1 1071423 1072292 D PFAM: integrase catalytic region; KEGG: mpo:Mpop_3817 integrase catalytic region; integrase catalytic subunit 1071423..1072292 Methylobacterium extorquens CM4 7118558 YP_002419890.1 CDS Mchl_1057 NC_011757.1 1072449 1073129 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_0458 sigma-70 family RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit complement(1072449..1073129) Methylobacterium extorquens CM4 7118560 YP_002419891.1 CDS Mchl_1058 NC_011757.1 1073610 1075199 R PFAM: filamentation induced by cAMP protein Fic; KEGG: rpt:Rpal_1106 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein Fic complement(1073610..1075199) Methylobacterium extorquens CM4 7118561 YP_002419892.1 CDS Mchl_1062 NC_011757.1 1076428 1076736 D KEGG: mrd:Mrad2831_2559 cytochrome C biogenesis protein transmembrane region; cytochrome C biogenesis protein transmembrane region 1076428..1076736 Methylobacterium extorquens CM4 7118565 YP_002419893.1 CDS Mchl_1063 NC_011757.1 1078294 1079715 R PFAM: carbohydrate-selective porin OprB; KEGG: nha:Nham_2969 carbohydrate-selective porin OprB; carbohydrate-selective porin OprB complement(1078294..1079715) Methylobacterium extorquens CM4 7118566 YP_002419894.1 CDS Mchl_1064 NC_011757.1 1080386 1080964 D KEGG: bvi:Bcep1808_7510 hypothetical protein; hypothetical protein 1080386..1080964 Methylobacterium extorquens CM4 7118567 YP_002419895.1 CDS Mchl_1065 NC_011757.1 1080874 1081683 R hypothetical protein complement(1080874..1081683) Methylobacterium extorquens CM4 7118568 YP_002419896.1 CDS Mchl_1066 NC_011757.1 1082245 1082979 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpo:Mpop_4076 transcriptional regulator; transcriptional regulator 1082245..1082979 Methylobacterium extorquens CM4 7118569 YP_002419897.1 CDS Mchl_1067 NC_011757.1 1082976 1084310 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mpo:Mpop_4077 integral membrane sensor signal transduction histidine kinase; histidine kinase 1082976..1084310 Methylobacterium extorquens CM4 7118570 YP_002419898.1 CDS Mchl_1068 NC_011757.1 1084407 1084661 D KEGG: mpo:Mpop_4079 hypothetical protein; hypothetical protein 1084407..1084661 Methylobacterium extorquens CM4 7118571 YP_002419899.1 CDS Mchl_1069 NC_011757.1 1085224 1085415 D hypothetical protein 1085224..1085415 Methylobacterium extorquens CM4 7118572 YP_002419900.1 CDS Mchl_1070 NC_011757.1 1085760 1086131 D KEGG: mrd:Mrad2831_1404 hypothetical protein; hypothetical protein 1085760..1086131 Methylobacterium extorquens CM4 7118573 YP_002419901.1 CDS Mchl_1071 NC_011757.1 1086256 1087620 D TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mpo:Mpop_4082 efflux transporter RND family, MFP subunit; efflux transporter RND family MFP subunit 1086256..1087620 Methylobacterium extorquens CM4 7118574 YP_002419902.1 CDS Mchl_1072 NC_011757.1 1087632 1090880 D TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mpo:Mpop_4083 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux pump 1087632..1090880 Methylobacterium extorquens CM4 7118575 YP_002419903.1 CDS Mchl_1073 NC_011757.1 1090886 1091440 D KEGG: mpo:Mpop_4085 hypothetical protein; hypothetical protein 1090886..1091440 Methylobacterium extorquens CM4 7118576 YP_002419904.1 CDS Mchl_1074 NC_011757.1 1091486 1092403 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mpo:Mpop_4086 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 1091486..1092403 Methylobacterium extorquens CM4 7118577 YP_002419905.1 CDS Mchl_1075 NC_011757.1 1092416 1092586 D KEGG: mpo:Mpop_4087 hypothetical protein; hypothetical protein 1092416..1092586 Methylobacterium extorquens CM4 7118578 YP_002419906.1 CDS Mchl_1076 NC_011757.1 1092909 1093163 D KEGG: xau:Xaut_0674 hypothetical protein; hypothetical protein 1092909..1093163 Methylobacterium extorquens CM4 7118579 YP_002419907.1 CDS Mchl_1077 NC_011757.1 1093402 1093542 D hypothetical protein 1093402..1093542 Methylobacterium extorquens CM4 7118580 YP_002419908.1 CDS Mchl_1078 NC_011757.1 1093539 1095083 R KEGG: mes:Meso_4409 hypothetical protein; hypothetical protein complement(1093539..1095083) Methylobacterium extorquens CM4 7118581 YP_002419909.1 CDS Mchl_1079 NC_011757.1 1095286 1096026 R PFAM: protein of unknown function DUF1526; KEGG: mag:amb1131 hypothetical protein; hypothetical protein complement(1095286..1096026) Methylobacterium extorquens CM4 7118582 YP_002419910.1 CDS Mchl_1080 NC_011757.1 1096596 1096802 R hypothetical protein complement(1096596..1096802) Methylobacterium extorquens CM4 7118583 YP_002419911.1 CDS Mchl_1082 NC_011757.1 1097275 1098144 R PFAM: integrase catalytic region; KEGG: mpo:Mpop_3817 integrase catalytic region; integrase catalytic subunit complement(1097275..1098144) Methylobacterium extorquens CM4 7118585 YP_002419912.1 CDS Mchl_1083 NC_011757.1 1098183 1098458 R PFAM: transposase IS3/IS911 family protein; KEGG: mpo:Mpop_3816 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(1098183..1098458) Methylobacterium extorquens CM4 7118586 YP_002419913.1 CDS Mchl_1084 NC_011757.1 1098507 1098647 R KEGG: mrd:Mrad2831_4774 pentapeptide repeat-containing protein; pentapeptide repeat-containing protein complement(1098507..1098647) Methylobacterium extorquens CM4 7118587 YP_002419914.1 CDS Mchl_1085 NC_011757.1 1099221 1099511 D KEGG: mpo:Mpop_3234 integrase family protein; integrase family protein 1099221..1099511 Methylobacterium extorquens CM4 7118588 YP_002419915.1 CDS Mchl_1086 NC_011757.1 1099508 1100062 D KEGG: mpo:Mpop_3233 integrase family protein; hypothetical protein 1099508..1100062 Methylobacterium extorquens CM4 7118589 YP_002419916.1 CDS Mchl_1087 NC_011757.1 1100964 1101317 R KEGG: gur:Gura_4266 hypothetical protein; hypothetical protein complement(1100964..1101317) Methylobacterium extorquens CM4 7118590 YP_002419917.1 CDS Mchl_1088 NC_011757.1 1101432 1102391 R PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: acr:Acry_3394 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein complement(1101432..1102391) Methylobacterium extorquens CM4 7118591 YP_002419918.1 CDS Mchl_1089 NC_011757.1 1102478 1103338 D PFAM: integrase catalytic region; KEGG: mrd:Mrad2831_6485 integrase catalytic region; integrase catalytic subunit 1102478..1103338 Methylobacterium extorquens CM4 7118592 YP_002419919.1 CDS Mchl_1090 NC_011757.1 1103497 1104458 D KEGG: mrd:Mrad2831_5182 transposase; transposase join(1103497..1103838,1103838..1104458) Methylobacterium extorquens CM4 7118593 YP_002419920.1 CDS Mchl_1093 NC_011757.1 1105389 1105577 R KEGG: mpo:Mpop_4120 cytochrome C biogenesis protein transmembrane region; cytochrome C biogenesis protein transmembrane region complement(1105389..1105577) Methylobacterium extorquens CM4 7117210 YP_002419921.1 CDS Mchl_1094 NC_011757.1 1105718 1106791 R KEGG: mpo:Mpop_4119 protein of unknown function DUF949; hypothetical protein complement(1105718..1106791) Methylobacterium extorquens CM4 7117211 YP_002419922.1 CDS Mchl_1095 NC_011757.1 1106880 1107398 R TIGRFAM: lipoprotein signal peptidase; KEGG: mpo:Mpop_4118 peptidase A8 signal peptidase II; lipoprotein signal peptidase complement(1106880..1107398) Methylobacterium extorquens CM4 7117212 YP_002419923.1 CDS Mchl_1096 NC_011757.1 1107398 1109593 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mpo:Mpop_4117 ATPase P; ATPase P complement(1107398..1109593) Methylobacterium extorquens CM4 7117213 YP_002419924.1 CDS Mchl_1097 NC_011757.1 1109694 1110095 D PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; KEGG: mpo:Mpop_4116 MerR family transcriptional regulator; MerR family transcriptional regulator 1109694..1110095 Methylobacterium extorquens CM4 7117214 YP_002419925.1 CDS Mchl_1098 NC_011757.1 1110772 1113192 R KEGG: mpo:Mpop_4130 copper-translocating P-type ATPase; TIGRFAM: ATPase P; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein; copper-translocating P-type ATPase complement(1110772..1113192) Methylobacterium extorquens CM4 7117215 YP_002419926.1 CDS Mchl_1099 NC_011757.1 1113260 1113742 R PFAM: protein of unknown function DUF305; KEGG: sme:SMa1024 hypothetical protein; hypothetical protein complement(1113260..1113742) Methylobacterium extorquens CM4 7117216 YP_002419927.1 CDS Mchl_1100 NC_011757.1 1113797 1114129 R KEGG: mpo:Mpop_2537 protein of unknown function DUF326; hypothetical protein complement(1113797..1114129) Methylobacterium extorquens CM4 7117217 YP_002419928.1 CDS Mchl_1101 NC_011757.1 1114309 1114707 R PFAM: protein of unknown function DUF305; KEGG: mpo:Mpop_0108 protein of unknown function DUF305; hypothetical protein complement(1114309..1114707) Methylobacterium extorquens CM4 7117218 YP_002419929.1 CDS Mchl_1102 NC_011757.1 1114734 1115099 R KEGG: mpo:Mpop_0109 hypothetical protein; hypothetical protein complement(1114734..1115099) Methylobacterium extorquens CM4 7117219 YP_002419930.1 CDS Mchl_1103 NC_011757.1 1115119 1118268 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mpo:Mpop_0110 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux pump complement(1115119..1118268) Methylobacterium extorquens CM4 7117220 YP_002419931.1 CDS Mchl_1104 NC_011757.1 1118282 1120021 R TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: mpo:Mpop_4125 efflux transporter RND family, MFP subunit; efflux transporter RND family MFP subunit complement(1118282..1120021) Methylobacterium extorquens CM4 7117221 YP_002419932.1 CDS Mchl_1105 NC_011757.1 1120107 1120577 R KEGG: mpo:Mpop_0112 hypothetical protein; hypothetical protein complement(1120107..1120577) Methylobacterium extorquens CM4 7117222 YP_002419933.1 CDS Mchl_1106 NC_011757.1 1120669 1120881 R KEGG: mrd:Mrad2831_2531 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein complement(1120669..1120881) Methylobacterium extorquens CM4 7117223 YP_002419934.1 CDS Mchl_1107 NC_011757.1 1121262 1122002 D KEGG: mpo:Mpop_4114 hypothetical protein; hypothetical protein 1121262..1122002 Methylobacterium extorquens CM4 7117224 YP_002419935.1 CDS Mchl_1108 NC_011757.1 1122016 1122492 R PFAM: protein of unknown function DUF411; KEGG: mpo:Mpop_4113 protein of unknown function DUF411; hypothetical protein complement(1122016..1122492) Methylobacterium extorquens CM4 7117225 YP_002419936.1 CDS Mchl_1109 NC_011757.1 1122512 1125685 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mpo:Mpop_4112 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux pump complement(1122512..1125685) Methylobacterium extorquens CM4 7117226 YP_002419937.1 CDS Mchl_1111 NC_011757.1 1126106 1126372 D PFAM: transposase IS3/IS911 family protein; KEGG: dde:Dde_2906 Fis family transcriptional regulator; transposase IS3/IS911 family protein 1126106..1126372 Methylobacterium extorquens CM4 7117228 YP_002419938.1 CDS Mchl_1112 NC_011757.1 1126423 1127205 D PFAM: integrase catalytic region; KEGG: bcj:BCAM1952 transposase; integrase catalytic subunit 1126423..1127205 Methylobacterium extorquens CM4 7117229 YP_002419939.1 CDS Mchl_1113 NC_011757.1 1128136 1128330 D hypothetical protein 1128136..1128330 Methylobacterium extorquens CM4 7117230 YP_002419940.1 CDS Mchl_1114 NC_011757.1 1128387 1128608 R hypothetical protein complement(1128387..1128608) Methylobacterium extorquens CM4 7117231 YP_002419941.1 CDS Mchl_1115 NC_011757.1 1129021 1129425 D KEGG: LOC100030415; hypothetical protein LOC100030415; hypothetical protein 1129021..1129425 Methylobacterium extorquens CM4 7117232 YP_002419942.1 CDS Mchl_1118 NC_011757.1 1129995 1130426 R KEGG: mpo:Mpop_4084 exported protein of unknown function; hypothetical protein complement(1129995..1130426) Methylobacterium extorquens CM4 7117235 YP_002419943.1 CDS Mchl_1120 NC_011757.1 1132102 1132305 D hypothetical protein 1132102..1132305 Methylobacterium extorquens CM4 7117237 YP_002419944.1 CDS Mchl_1121 NC_011757.1 1132225 1132494 R KEGG: mrd:Mrad2831_0880 hypothetical protein; hypothetical protein complement(1132225..1132494) Methylobacterium extorquens CM4 7117238 YP_002419945.1 CDS Mchl_1122 NC_011757.1 1132650 1133918 R PFAM: transposase mutator type; KEGG: mrd:Mrad2831_2616 transposase mutator type; transposase mutator type complement(1132650..1133918) Methylobacterium extorquens CM4 7117239 YP_002419946.1 CDS Mchl_1124 NC_011757.1 1135126 1135407 D PFAM: plasmid maintenance system killer; KEGG: mpo:Mpop_3936 plasmid maintenance system killer; plasmid maintenance system killer 1135126..1135407 Methylobacterium extorquens CM4 7117241 YP_002419947.1 CDS Mchl_1125 NC_011757.1 1135480 1135839 D TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: mpo:Mpop_3935 plasmid maintenance system antidote protein, XRE family; XRE family transcriptional regulator 1135480..1135839 Methylobacterium extorquens CM4 7117242 YP_002419948.1 CDS Mchl_1126 NC_011757.1 1135843 1136205 D hypothetical protein 1135843..1136205 Methylobacterium extorquens CM4 7117243 YP_002419949.1 CDS Mchl_1127 NC_011757.1 1136234 1137166 D KEGG: rpt:Rpal_3729 hypothetical protein; hypothetical protein 1136234..1137166 Methylobacterium extorquens CM4 7117244 YP_002419950.1 CDS Mchl_1128 NC_011757.1 1137229 1137741 R hypothetical protein complement(1137229..1137741) Methylobacterium extorquens CM4 7117245 YP_002419951.1 CDS Mchl_1129 NC_011757.1 1138139 1138387 R KEGG: mex:Mext_4519 hypothetical protein; hypothetical protein complement(1138139..1138387) Methylobacterium extorquens CM4 7117246 YP_002419952.1 CDS Mchl_1132 NC_011757.1 1138976 1139269 D KEGG: shl:Shal_1751 hypothetical protein; hypothetical protein 1138976..1139269 Methylobacterium extorquens CM4 7117249 YP_002419953.1 CDS Mchl_1134 NC_011757.1 1139989 1140882 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bra:BRADO4000 OprD regulatory protein; LysR family transcriptional regulator complement(1139989..1140882) Methylobacterium extorquens CM4 7117251 YP_002419954.1 CDS Mchl_1135 NC_011757.1 1141015 1141410 D PFAM: cupin; KEGG: bbt:BBta_2281 transcriptional regulator; cupin 1141015..1141410 Methylobacterium extorquens CM4 7117252 YP_002419955.1 CDS Mchl_1136 NC_011757.1 1141508 1142734 D PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_6467 major facilitator transporter; major facilitator superfamily protein 1141508..1142734 Methylobacterium extorquens CM4 7117253 YP_002419956.1 CDS Mchl_1137 NC_011757.1 1142806 1143573 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bid:Bind_1760 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1142806..1143573 Methylobacterium extorquens CM4 7117254 YP_002419957.1 CDS Mchl_1138 NC_011757.1 1143585 1144088 D KEGG: ank:AnaeK_3353 hypothetical protein; hypothetical protein 1143585..1144088 Methylobacterium extorquens CM4 7117255 YP_002419958.1 CDS Mchl_1142 NC_011757.1 1146608 1147501 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bra:BRADO4000 OprD regulatory protein; LysR family transcriptional regulator complement(1146608..1147501) Methylobacterium extorquens CM4 7117259 YP_002419959.1 CDS Mchl_1143 NC_011757.1 1147749 1148384 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; aldehyde dehydrogenase, conserved site; KEGG: mrd:Mrad2831_4261 2Fe-2S iron-sulfur cluster binding domain-containing protein; (2Fe-2S)-binding domain-containing protein 1147749..1148384 Methylobacterium extorquens CM4 7117260 YP_002419960.1 CDS Mchl_1144 NC_011757.1 1148381 1149331 D PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mrd:Mrad2831_4262 molybdopterin dehydrogenase FAD-binding; FAD-binding molybdopterin dehydrogenase 1148381..1149331 Methylobacterium extorquens CM4 7117261 YP_002419961.1 CDS Mchl_1145 NC_011757.1 1149335 1151554 D PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mrd:Mrad2831_4263 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 1149335..1151554 Methylobacterium extorquens CM4 7117262 YP_002419962.1 CDS Mchl_1146 NC_011757.1 1151564 1152058 D PFAM: cupin; KEGG: bxe:Bxe_B1954 hypothetical protein; cupin 1151564..1152058 Methylobacterium extorquens CM4 7117263 YP_002419963.1 CDS Mchl_1147 NC_011757.1 1152113 1152289 D hypothetical protein 1152113..1152289 Methylobacterium extorquens CM4 7117264 YP_002419964.1 CDS Mchl_1148 NC_011757.1 1152326 1152820 R hypothetical protein complement(1152326..1152820) Methylobacterium extorquens CM4 7117265 YP_002419965.1 CDS Mchl_1149 NC_011757.1 1153975 1155009 D PFAM: GTPase EngC; KEGG: mex:Mext_1006 GTPase EngC; GTPase EngC 1153975..1155009 Methylobacterium extorquens CM4 7117266 YP_002419966.1 CDS Mchl_1150 NC_011757.1 1161631 1163724 D PFAM: peptidase M23; KEGG: mex:Mext_1023 peptidase M23B; peptidase M23 1161631..1163724 Methylobacterium extorquens CM4 7117273 YP_002419967.1 CDS Mchl_1151 NC_011757.1 1163747 1164259 R PFAM: protein of unknown function DUF1311; KEGG: mex:Mext_1024 hypothetical protein; hypothetical protein complement(1163747..1164259) Methylobacterium extorquens CM4 7117274 YP_002419968.1 CDS Mchl_1152 NC_011757.1 1164326 1165216 R PFAM: glutamyl-tRNA synthetase class Ic; KEGG: mex:Mext_1025 glutamyl-tRNA synthetase class Ic; glutamyl-tRNA synthetase class Ic complement(1164326..1165216) Methylobacterium extorquens CM4 7117275 YP_002419969.1 CDS Mchl_1153 NC_011757.1 1165249 1165548 R KEGG: mex:Mext_1026 hypothetical protein; hypothetical protein complement(1165249..1165548) Methylobacterium extorquens CM4 7117276 YP_002419970.1 CDS Mchl_1154 NC_011757.1 1165772 1165990 D KEGG: mpo:Mpop_0959 hypothetical protein; hypothetical protein 1165772..1165990 Methylobacterium extorquens CM4 7117277 YP_002419971.1 CDS Mchl_1155 NC_011757.1 1166013 1167893 R molecular chaperone; heat shock protein 90 complement(1166013..1167893) Methylobacterium extorquens CM4 7117278 YP_002419972.1 CDS Mchl_1156 NC_011757.1 1168048 1168362 R KEGG: mex:Mext_1029 hypothetical protein; hypothetical protein complement(1168048..1168362) Methylobacterium extorquens CM4 7117279 YP_002419973.1 CDS Mchl_1157 NC_011757.1 1168678 1170273 D PFAM: gamma-glutamyltranspeptidase; KEGG: mex:Mext_1030 gamma-glutamyltransferase; gamma-glutamyltransferase 1168678..1170273 Methylobacterium extorquens CM4 7117280 YP_002419974.1 CDS Mchl_1158 NC_011757.1 1170376 1172013 D PFAM: Dak kinase; Dak phosphatase; KEGG: mex:Mext_1031 glycerone kinase; glycerone kinase 1170376..1172013 Methylobacterium extorquens CM4 7117281 YP_002419975.1 CDS Mchl_1159 NC_011757.1 1172022 1172870 D PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_1032 methyltransferase type 11; type 11 methyltransferase 1172022..1172870 Methylobacterium extorquens CM4 7117282 YP_002419976.1 CDS Mchl_1160 NC_011757.1 1172926 1174218 D PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1033 major facilitator transporter; major facilitator superfamily protein 1172926..1174218 Methylobacterium extorquens CM4 7117283 YP_002419977.1 CDS Mchl_1161 NC_011757.1 1174337 1175572 D KEGG: mex:Mext_1034 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subunit CbiE 1174337..1175572 Methylobacterium extorquens CM4 7117284 YP_002419978.1 CDS Mchl_1162 NC_011757.1 1175551 1175976 D KEGG: mex:Mext_1035 CobE protein; CobE protein 1175551..1175976 Methylobacterium extorquens CM4 7117285 YP_002419979.1 CDS Mchl_1163 NC_011757.1 1176064 1177155 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_1036 diguanylate cyclase; diguanylate cyclase 1176064..1177155 Methylobacterium extorquens CM4 7117286 YP_002419980.1 CDS Mchl_1164 NC_011757.1 1177217 1178125 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1037 LysR substrate-binding; LysR family transcriptional regulator complement(1177217..1178125) Methylobacterium extorquens CM4 7117287 YP_002419981.1 CDS Mchl_1165 NC_011757.1 1178235 1178678 D PFAM: hypothetical protein; KEGG: mex:Mext_1038 transmembrane pair domain-containing protein; hypothetical protein 1178235..1178678 Methylobacterium extorquens CM4 7117288 YP_002419982.1 CDS Mchl_1166 NC_011757.1 1178759 1179559 D TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_1039 precorrin-4 C11-methyltransferase; precorrin-4 C11-methyltransferase 1178759..1179559 Methylobacterium extorquens CM4 7117289 YP_002419983.1 CDS Mchl_1167 NC_011757.1 1179556 1180881 D responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 1179556..1180881 Methylobacterium extorquens CM4 7114694 YP_002419984.1 CDS Mchl_1168 NC_011757.1 1181147 1181575 R PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_1041 helix-turn-helix domain-containing protein; XRE family transcriptional regulator complement(1181147..1181575) Methylobacterium extorquens CM4 7117862 YP_002419985.1 CDS Mchl_1169 NC_011757.1 1182026 1182361 D PFAM: antibiotic biosynthesis monooxygenase; KEGG: mex:Mext_1042 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 1182026..1182361 Methylobacterium extorquens CM4 7117863 YP_002419986.1 CDS Mchl_1170 NC_011757.1 1182489 1183736 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1043 major facilitator transporter; major facilitator superfamily protein complement(1182489..1183736) Methylobacterium extorquens CM4 7117864 YP_002419987.1 CDS Mchl_1171 NC_011757.1 1184167 1185672 D TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: mex:Mext_1044 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 1184167..1185672 Methylobacterium extorquens CM4 7117865 YP_002419988.1 CDS Mchl_1172 NC_011757.1 1185676 1186269 R KEGG: mex:Mext_1045 Fe2+/Zn2+ uptake regulation protein-like protein; Fe2+/Zn2+ uptake regulation protein-like protein complement(1185676..1186269) Methylobacterium extorquens CM4 7117866 YP_002419989.1 CDS Mchl_1173 NC_011757.1 1186489 1186620 D KEGG: mpo:Mpop_0976 hypothetical protein; hypothetical protein 1186489..1186620 Methylobacterium extorquens CM4 7117867 YP_002419990.1 CDS Mchl_1174 NC_011757.1 1186617 1187516 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1046 ABC transporter; ABC transporter 1186617..1187516 Methylobacterium extorquens CM4 7117868 YP_002419991.1 CDS Mchl_1175 NC_011757.1 1187513 1188400 D PFAM: ABC transporter; KEGG: mex:Mext_1047 ABC transporter; ABC transporter 1187513..1188400 Methylobacterium extorquens CM4 7117869 YP_002419992.1 CDS Mchl_1176 NC_011757.1 1188646 1188750 D KEGG: mpo:Mpop_0996 hypothetical protein; hypothetical protein 1188646..1188750 Methylobacterium extorquens CM4 7117870 YP_002419993.1 CDS Mchl_1177 NC_011757.1 1188956 1192477 D KEGG: mex:Mext_1048 DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III subunit alpha; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 1188956..1192477 Methylobacterium extorquens CM4 7117871 YP_002419994.1 CDS Mchl_1178 NC_011757.1 1192799 1193584 D KEGG: mex:Mext_1049 hypothetical protein; hypothetical protein 1192799..1193584 Methylobacterium extorquens CM4 7117872 YP_002419995.1 CDS Mchl_1179 NC_011757.1 1193699 1194394 R PFAM: cation transport protein ChaC; AIG2 family protein; KEGG: mex:Mext_1050 cation transport protein ChaC; cation transport protein ChaC complement(1193699..1194394) Methylobacterium extorquens CM4 7117873 YP_002419996.1 CDS Mchl_1180 NC_011757.1 1194648 1195040 R KEGG: mpo:Mpop_0992 hypothetical protein; hypothetical protein complement(1194648..1195040) Methylobacterium extorquens CM4 7117874 YP_002419997.1 CDS Mchl_1181 NC_011757.1 1195169 1195909 D TIGRFAM: DNA repair protein RecO; PFAM: recombination protein O RecO; KEGG: mex:Mext_1051 DNA repair protein RecO; DNA repair protein RecO 1195169..1195909 Methylobacterium extorquens CM4 7117875 YP_002419998.1 CDS Mchl_1182 NC_011757.1 1196031 1198277 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1196031..1198277 Methylobacterium extorquens CM4 7117876 YP_002419999.1 CDS infA NC_011757.1 1198354 1198629 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(1198354..1198629) Methylobacterium extorquens CM4 7117877 YP_002420000.1 CDS Mchl_1184 NC_011757.1 1198947 1200059 R PFAM: extracellular ligand-binding receptor; KEGG: mex:Mext_1054 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(1198947..1200059) Methylobacterium extorquens CM4 7117878 YP_002420001.1 CDS Mchl_1185 NC_011757.1 1200229 1200552 D PFAM: protein of unknown function DUF182; KEGG: mpo:Mpop_0987 protein of unknown function DUF182; hypothetical protein 1200229..1200552 Methylobacterium extorquens CM4 7117879 YP_002420002.1 CDS Mchl_1186 NC_011757.1 1200619 1201347 D KEGG: mex:Mext_1056 xanthine dehydrogenase accessory factor; xanthine dehydrogenase accessory factor 1200619..1201347 Methylobacterium extorquens CM4 7117880 YP_002420003.1 CDS Mchl_1187 NC_011757.1 1201352 1202362 D PFAM: molybdopterin binding domain; KEGG: mex:Mext_1057 molybdopterin binding domain-containing protein; molybdopterin binding domain 1201352..1202362 Methylobacterium extorquens CM4 7117881 YP_002420004.1 CDS Mchl_1188 NC_011757.1 1202349 1202942 D KEGG: mex:Mext_1058 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1202349..1202942 Methylobacterium extorquens CM4 7117882 YP_002420005.1 CDS Mchl_1189 NC_011757.1 1202950 1203111 R KEGG: mex:Mext_1059 hypothetical protein; hypothetical protein complement(1202950..1203111) Methylobacterium extorquens CM4 7117883 YP_002420006.1 CDS Mchl_1190 NC_011757.1 1203316 1204182 R PFAM: formyl transferase; KEGG: mex:Mext_1060 formyl transferase domain-containing protein; formyl transferase complement(1203316..1204182) Methylobacterium extorquens CM4 7117884 YP_002420007.1 CDS Mchl_1191 NC_011757.1 1204347 1205081 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1061 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1204347..1205081 Methylobacterium extorquens CM4 7117885 YP_002420008.1 CDS Mchl_1192 NC_011757.1 1205140 1205901 R KEGG: mex:Mext_1062 hypothetical protein; hypothetical protein complement(1205140..1205901) Methylobacterium extorquens CM4 7117886 YP_002420009.1 CDS Mchl_1193 NC_011757.1 1206153 1206785 D PFAM: Exopolysaccharide synthesis ExoD; KEGG: mpo:Mpop_0979 exopolysaccharide synthesis ExoD; Exopolysaccharide synthesis ExoD 1206153..1206785 Methylobacterium extorquens CM4 7117887 YP_002420010.1 CDS Mchl_1194 NC_011757.1 1206990 1207700 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1064 ABC transporter; ABC transporter complement(1206990..1207700) Methylobacterium extorquens CM4 7117888 YP_002420011.1 CDS Mchl_1195 NC_011757.1 1207716 1209035 R TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: mex:Mext_1065 LolC/E family lipoprotein releasing system, transmembrane protein; lipoprotein releasing system, transmembrane protein, LolC/E family complement(1207716..1209035) Methylobacterium extorquens CM4 7117889 YP_002420012.1 CDS Mchl_1196 NC_011757.1 1209048 1210373 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(1209048..1210373) Methylobacterium extorquens CM4 7117890 YP_002420013.1 CDS Mchl_1197 NC_011757.1 1210849 1211190 R PFAM: protein of unknown function DUF1467; KEGG: mex:Mext_1068 hypothetical protein; hypothetical protein complement(1210849..1211190) Methylobacterium extorquens CM4 7117891 YP_002420014.1 CDS Mchl_1198 NC_011757.1 1211256 1211660 R KEGG: mex:Mext_1069 methylmalonyl-CoA epimerase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; methylmalonyl-CoA epimerase complement(1211256..1211660) Methylobacterium extorquens CM4 7117892 YP_002420015.1 CDS Mchl_1199 NC_011757.1 1211811 1213484 R PFAM: beta-lactamase; RNA-metabolising metallo-beta-lactamase; KEGG: mex:Mext_1070 beta-lactamase domain-containing protein; beta-lactamase complement(1211811..1213484) Methylobacterium extorquens CM4 7117893 YP_002420016.1 CDS Mchl_1200 NC_011757.1 1213504 1214343 R TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: mex:Mext_1071 biotin--acetyl-CoA-carboxylase ligase; biotin/acetyl-CoA-carboxylase ligase complement(1213504..1214343) Methylobacterium extorquens CM4 7117894 YP_002420017.1 CDS Mchl_1201 NC_011757.1 1214349 1215788 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: mex:Mext_1072 proton-translocating NADH-quinone oxidoreductase, chain N; proton-translocating NADH-quinone oxidoreductase subunit N complement(1214349..1215788) Methylobacterium extorquens CM4 7117895 YP_002420018.1 CDS Mchl_1202 NC_011757.1 1215785 1217368 R KEGG: mex:Mext_1073 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M complement(1215785..1217368) Methylobacterium extorquens CM4 7117896 YP_002420019.1 CDS Mchl_1203 NC_011757.1 1217368 1219479 R KEGG: mex:Mext_1074 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L complement(1217368..1219479) Methylobacterium extorquens CM4 7117897 YP_002420020.1 CDS Mchl_1204 NC_011757.1 1219538 1219843 R PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: mpo:Mpop_1009 NADH-ubiquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase chain 4L complement(1219538..1219843) Methylobacterium extorquens CM4 7117898 YP_002420021.1 CDS Mchl_1205 NC_011757.1 1219849 1220469 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: mex:Mext_1076 NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 complement(1219849..1220469) Methylobacterium extorquens CM4 7117899 YP_002420022.1 CDS Mchl_1206 NC_011757.1 1220679 1221167 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I complement(1220679..1221167) Methylobacterium extorquens CM4 7117900 YP_002420023.1 CDS Mchl_1207 NC_011757.1 1221252 1222274 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H complement(1221252..1222274) Methylobacterium extorquens CM4 7117901 YP_002420024.1 CDS Mchl_1208 NC_011757.1 1222287 1224353 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G complement(1222287..1224353) Methylobacterium extorquens CM4 7117902 YP_002420025.1 CDS Mchl_1209 NC_011757.1 1224388 1225689 R part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F complement(1224388..1225689) Methylobacterium extorquens CM4 7117903 YP_002420026.1 CDS Mchl_1210 NC_011757.1 1225700 1226938 R KEGG: mex:Mext_1081 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH-quinone oxidoreductase subunit E complement(1225700..1226938) Methylobacterium extorquens CM4 7117904 YP_002420027.1 CDS Mchl_1211 NC_011757.1 1226957 1228147 R KEGG: mex:Mext_1082 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase I subunit D complement(1226957..1228147) Methylobacterium extorquens CM4 7117905 YP_002420028.1 CDS Mchl_1212 NC_011757.1 1228159 1228818 R KEGG: mex:Mext_1083 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH (or F420H2) dehydrogenase subunit C complement(1228159..1228818) Methylobacterium extorquens CM4 7117906 YP_002420029.1 CDS Mchl_1213 NC_011757.1 1228830 1229417 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(1228830..1229417) Methylobacterium extorquens CM4 7117907 YP_002420030.1 CDS Mchl_1214 NC_011757.1 1229470 1229835 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: mpo:Mpop_1019 NADH-ubiquinone/plastoquinone oxidoreductase chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 complement(1229470..1229835) Methylobacterium extorquens CM4 7117908 YP_002420031.1 CDS Mchl_1215 NC_011757.1 1230667 1231155 D PFAM: SCP-like extracellular; KEGG: mex:Mext_1086 SCP-like extracellular; SCP-like extracellular 1230667..1231155 Methylobacterium extorquens CM4 7117910 YP_002420032.1 CDS Mchl_1216 NC_011757.1 1231201 1231641 R TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain protein; KEGG: mex:Mext_1087 pseudoazurin; pseudoazurin complement(1231201..1231641) Methylobacterium extorquens CM4 7117911 YP_002420033.1 CDS Mchl_1217 NC_011757.1 1231937 1235410 D TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain oligomerisation; carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: mex:Mext_1088 carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase, large subunit 1231937..1235410 Methylobacterium extorquens CM4 7117912 YP_002420034.1 CDS greA NC_011757.1 1235541 1236023 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1235541..1236023 Methylobacterium extorquens CM4 7117913 YP_002420035.1 CDS Mchl_1219 NC_011757.1 1236029 1236529 D KEGG: mex:Mext_1090 hypothetical protein; hypothetical protein 1236029..1236529 Methylobacterium extorquens CM4 7117914 YP_002420036.1 CDS Mchl_1220 NC_011757.1 1236540 1237664 D PFAM: protein of unknown function DUF1022; KEGG: mex:Mext_1091 hypothetical protein; hypothetical protein 1236540..1237664 Methylobacterium extorquens CM4 7117915 YP_002420037.1 CDS Mchl_1221 NC_011757.1 1237815 1238789 D KEGG: mex:Mext_1092 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 1237815..1238789 Methylobacterium extorquens CM4 7117916 YP_002420038.1 CDS Mchl_1222 NC_011757.1 1239130 1240020 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1093 LysR substrate-binding; LysR family transcriptional regulator 1239130..1240020 Methylobacterium extorquens CM4 7117917 YP_002420039.1 CDS Mchl_1223 NC_011757.1 1240137 1240592 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 1240137..1240592 Methylobacterium extorquens CM4 7117918 YP_002420040.1 CDS Mchl_1224 NC_011757.1 1240611 1241081 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: mex:Mext_1095 acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1240611..1241081 Methylobacterium extorquens CM4 7117919 YP_002420041.1 CDS Mchl_1225 NC_011757.1 1241092 1242459 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mex:Mext_1096 acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase 1241092..1242459 Methylobacterium extorquens CM4 7117920 YP_002420042.1 CDS Mchl_1226 NC_011757.1 1242544 1243218 D KEGG: mex:Mext_1097 leucyltransferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase 1242544..1243218 Methylobacterium extorquens CM4 7117921 YP_002420043.1 CDS Mchl_1227 NC_011757.1 1243285 1243905 R PFAM: regulatory protein TetR; KEGG: mex:Mext_1098 regulatory protein TetR; TetR family transcriptional regulator complement(1243285..1243905) Methylobacterium extorquens CM4 7117922 YP_002420044.1 CDS Mchl_1228 NC_011757.1 1243953 1244432 D KEGG: mex:Mext_1099 hypothetical protein; hypothetical protein 1243953..1244432 Methylobacterium extorquens CM4 7117923 YP_002420045.1 CDS Mchl_1229 NC_011757.1 1244532 1245191 R KEGG: mex:Mext_1100 hypothetical protein; hypothetical protein complement(1244532..1245191) Methylobacterium extorquens CM4 7117924 YP_002420046.1 CDS Mchl_1230 NC_011757.1 1245369 1245785 R PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: mex:Mext_1101 NADH:ubiquinone oxidoreductase 17.2 kD subunit; NADH:ubiquinone oxidoreductase 17.2 kD subunit complement(1245369..1245785) Methylobacterium extorquens CM4 7117925 YP_002420047.1 CDS Mchl_1231 NC_011757.1 1246305 1250036 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1246305..1250036 Methylobacterium extorquens CM4 7117926 YP_002420048.1 CDS Mchl_1232 NC_011757.1 1250690 1252600 D PFAM: K potassium transporter; KEGG: mpo:Mpop_0308 K potassium transporter; K potassium transporter 1250690..1252600 Methylobacterium extorquens CM4 7117927 YP_002420049.1 CDS Mchl_1233 NC_011757.1 1252659 1253195 R KEGG: mex:Mext_1123 hypothetical protein; hypothetical protein complement(1252659..1253195) Methylobacterium extorquens CM4 7117928 YP_002420050.1 CDS Mchl_1235 NC_011757.1 1253486 1254478 R KEGG: mex:Mext_1125 hypothetical protein; hypothetical protein complement(1253486..1254478) Methylobacterium extorquens CM4 7117930 YP_002420051.1 CDS Mchl_1237 NC_011757.1 1255275 1256327 D PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: mex:Mext_1126 platelet-activating factor acetylhydrolase plasma/intracellular isoform II; Platelet-activating factor acetylhydrolase plasma/intracellular isoform II 1255275..1256327 Methylobacterium extorquens CM4 7117932 YP_002420052.1 CDS Mchl_1238 NC_011757.1 1256363 1257496 D PFAM: metallophosphoesterase; KEGG: mex:Mext_1127 metallophosphoesterase; metallophosphoesterase 1256363..1257496 Methylobacterium extorquens CM4 7117933 YP_002420053.1 CDS Mchl_1239 NC_011757.1 1257898 1258257 R KEGG: mex:Mext_1128 hypothetical protein; hypothetical protein complement(1257898..1258257) Methylobacterium extorquens CM4 7117934 YP_002420054.1 CDS Mchl_1240 NC_011757.1 1258465 1258695 D hypothetical protein 1258465..1258695 Methylobacterium extorquens CM4 7117935 YP_002420055.1 CDS Mchl_1241 NC_011757.1 1259059 1259556 R PFAM: protein of unknown function DUF892; KEGG: mex:Mext_1129 hypothetical protein; hypothetical protein complement(1259059..1259556) Methylobacterium extorquens CM4 7117936 YP_002420056.1 CDS Mchl_1242 NC_011757.1 1259898 1261382 R KEGG: mex:Mext_1130 hypothetical protein; hypothetical protein complement(1259898..1261382) Methylobacterium extorquens CM4 7117937 YP_002420057.1 CDS Mchl_1243 NC_011757.1 1261849 1262688 D PFAM: formate/nitrite transporter; KEGG: mex:Mext_1131 formate/nitrite transporter; formate/nitrite transporter 1261849..1262688 Methylobacterium extorquens CM4 7117938 YP_002420058.1 CDS Mchl_1244 NC_011757.1 1262756 1264471 D PFAM: tyrosine protein kinase; aminoglycoside phosphotransferase; protein phosphatase 2C-like; serine/threonine protein kinase-related; SMART: protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: mex:Mext_1132 protein kinase; serine/threonine protein kinase 1262756..1264471 Methylobacterium extorquens CM4 7117939 YP_002420059.1 CDS Mchl_1245 NC_011757.1 1265355 1267373 R PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1133 cellulose synthase (UDP-forming); cellulose synthase complement(1265355..1267373) Methylobacterium extorquens CM4 7117940 YP_002420060.1 CDS Mchl_1246 NC_011757.1 1267355 1268590 R KEGG: mex:Mext_1134 hypothetical protein; hypothetical protein complement(1267355..1268590) Methylobacterium extorquens CM4 7117941 YP_002420061.1 CDS Mchl_1247 NC_011757.1 1268965 1269171 D KEGG: mpo:Mpop_3719 hypothetical protein; hypothetical protein 1268965..1269171 Methylobacterium extorquens CM4 7117942 YP_002420062.1 CDS Mchl_1248 NC_011757.1 1269528 1269893 R PFAM: PRC-barrel domain protein; KEGG: mex:Mext_1105 PRC-barrel domain-containing protein; PRC-barrel domain-containing protein complement(1269528..1269893) Methylobacterium extorquens CM4 7115429 YP_002420063.1 CDS Mchl_1249 NC_011757.1 1271105 1271854 D PFAM: ion transporter; ion transport 2 domain protein; KEGG: mex:Mext_1106 ion transport 2 domain-containing protein; ion transport 2 domain-containing protein 1271105..1271854 Methylobacterium extorquens CM4 7115512 YP_002420064.1 CDS Mchl_1250 NC_011757.1 1271937 1272794 R KEGG: mex:Mext_1107 hypothetical protein; hypothetical protein complement(1271937..1272794) Methylobacterium extorquens CM4 7115513 YP_002420065.1 CDS Mchl_1251 NC_011757.1 1272906 1273433 D PFAM: protein of unknown function DUF421; KEGG: mex:Mext_1108 hypothetical protein; hypothetical protein 1272906..1273433 Methylobacterium extorquens CM4 7115514 YP_002420066.1 CDS Mchl_1252 NC_011757.1 1273796 1274182 R PFAM: endoribonuclease L-PSP; KEGG: mex:Mext_1109 endoribonuclease L-PSP; endoribonuclease L-PSP complement(1273796..1274182) Methylobacterium extorquens CM4 7115515 YP_002420067.1 CDS Mchl_1253 NC_011757.1 1274281 1275381 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mex:Mext_1110 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase/NADH oxidase complement(1274281..1275381) Methylobacterium extorquens CM4 7115516 YP_002420068.1 CDS Mchl_1254 NC_011757.1 1275487 1276410 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1111 carbonate dehydratase; LysR family transcriptional regulator 1275487..1276410 Methylobacterium extorquens CM4 7115517 YP_002420069.1 CDS Mchl_1255 NC_011757.1 1276709 1277272 D KEGG: mex:Mext_1112 hypothetical protein; hypothetical protein 1276709..1277272 Methylobacterium extorquens CM4 7115518 YP_002420070.1 CDS Mchl_1256 NC_011757.1 1277409 1278011 D KEGG: hypothetical protein; hypothetical protein 1277409..1278011 Methylobacterium extorquens CM4 7115519 YP_002420071.1 CDS Mchl_1257 NC_011757.1 1278134 1278616 D KEGG: mex:Mext_1113 hypothetical protein; hypothetical protein 1278134..1278616 Methylobacterium extorquens CM4 7115520 YP_002420072.1 CDS Mchl_1258 NC_011757.1 1278646 1278744 R KEGG: mxa:MXAN_3681 hypothetical protein; hypothetical protein complement(1278646..1278744) Methylobacterium extorquens CM4 7115521 YP_002420073.1 CDS Mchl_1259 NC_011757.1 1279567 1280469 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mrd:Mrad2831_4570 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1279567..1280469) Methylobacterium extorquens CM4 7115522 YP_002420074.1 CDS Mchl_1260 NC_011757.1 1280587 1281543 D PFAM: NMT1/THI5 like domain protein; KEGG: mrd:Mrad2831_4569 NMT1/THI5-like domain-containing protein; NMT1/THI5 like domain-containing protein 1280587..1281543 Methylobacterium extorquens CM4 7115523 YP_002420075.1 CDS Mchl_1261 NC_011757.1 1281540 1282421 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mrd:Mrad2831_4568 binding-protein-dependent transporters inner membrane component; binding-protein-dependent transporters inner membrane component 1281540..1282421 Methylobacterium extorquens CM4 7115524 YP_002420076.1 CDS Mchl_1262 NC_011757.1 1282414 1283193 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mrd:Mrad2831_4567 ABC transporter; ABC transporter 1282414..1283193 Methylobacterium extorquens CM4 7115525 YP_002420077.1 CDS Mchl_1263 NC_011757.1 1283193 1284023 D KEGG: mpo:Mpop_3788 hypothetical protein; hypothetical protein 1283193..1284023 Methylobacterium extorquens CM4 7115526 YP_002420078.1 CDS Mchl_1264 NC_011757.1 1284020 1285897 D catalyzes the hydrolysis of allophanate; allophanate hydrolase 1284020..1285897 Methylobacterium extorquens CM4 7115527 YP_002420079.1 CDS Mchl_1265 NC_011757.1 1286156 1287199 R PFAM: ribonuclease BN; KEGG: mex:Mext_1115 ribonuclease BN; ribonuclease BN complement(1286156..1287199) Methylobacterium extorquens CM4 7115528 YP_002420080.1 CDS Mchl_1266 NC_011757.1 1287410 1288462 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: mex:Mext_1116 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1287410..1288462 Methylobacterium extorquens CM4 7115529 YP_002420081.1 CDS Mchl_1267 NC_011757.1 1288637 1290139 R KEGG: mex:Mext_1117 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase complement(1288637..1290139) Methylobacterium extorquens CM4 7115530 YP_002420082.1 CDS Mchl_1268 NC_011757.1 1290443 1291171 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1118 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1290443..1291171) Methylobacterium extorquens CM4 7115531 YP_002420083.1 CDS Mchl_1269 NC_011757.1 1291168 1291803 R PFAM: protein of unknown function DUF938; KEGG: mex:Mext_1119 hypothetical protein; hypothetical protein complement(1291168..1291803) Methylobacterium extorquens CM4 7115532 YP_002420084.1 CDS Mchl_1270 NC_011757.1 1292076 1292729 R KEGG: mex:Mext_1120 hypothetical protein; hypothetical protein complement(1292076..1292729) Methylobacterium extorquens CM4 7115533 YP_002420085.1 CDS Mchl_1272 NC_011757.1 1293941 1294306 D KEGG: mex:Mext_1135 hypothetical protein; hypothetical protein 1293941..1294306 Methylobacterium extorquens CM4 7115535 YP_002420086.1 CDS Mchl_1273 NC_011757.1 1294436 1295317 D KEGG: met:M446_1199 hypothetical protein; hypothetical protein 1294436..1295317 Methylobacterium extorquens CM4 7115536 YP_002420087.1 CDS Mchl_1274 NC_011757.1 1295544 1296590 R KEGG: mrd:Mrad2831_0784 adenylate/guanylate cyclase; adenylate/guanylate cyclase complement(1295544..1296590) Methylobacterium extorquens CM4 7115537 YP_002420088.1 CDS Mchl_1275 NC_011757.1 1296985 1297425 R PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_0032 ROSMUCR transcriptional regulator; MucR family transcriptional regulator complement(1296985..1297425) Methylobacterium extorquens CM4 7115538 YP_002420089.1 CDS Mchl_1276 NC_011757.1 1297784 1298164 R KEGG: mex:Mext_0033 hypothetical protein; hypothetical protein complement(1297784..1298164) Methylobacterium extorquens CM4 7115539 YP_002420090.1 CDS Mchl_1277 NC_011757.1 1298341 1299441 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_0034 helix-turn-helix domain-containing protein; AraC family transcriptional regulator 1298341..1299441 Methylobacterium extorquens CM4 7115540 YP_002420091.1 CDS Mchl_1278 NC_011757.1 1300026 1301033 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_0035 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 1300026..1301033 Methylobacterium extorquens CM4 7115541 YP_002420092.1 CDS Mchl_1279 NC_011757.1 1301037 1303409 D PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: mex:Mext_0036 kojibiose phosphorylase; Kojibiose phosphorylase 1301037..1303409 Methylobacterium extorquens CM4 7115542 YP_002420093.1 CDS Mchl_1280 NC_011757.1 1303572 1305167 D TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain protein; KEGG: mex:Mext_0037 YidE/YbjL duplication; hypothetical protein 1303572..1305167 Methylobacterium extorquens CM4 7115543 YP_002420094.1 CDS Mchl_1281 NC_011757.1 1305462 1307747 R PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: mex:Mext_0038 kojibiose phosphorylase; Kojibiose phosphorylase complement(1305462..1307747) Methylobacterium extorquens CM4 7115544 YP_002420095.1 CDS Mchl_1282 NC_011757.1 1307740 1308468 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: mex:Mext_0039 HAD family hydrolase; HAD-superfamily hydrolase complement(1307740..1308468) Methylobacterium extorquens CM4 7115545 YP_002420096.1 CDS Mchl_1283 NC_011757.1 1308499 1310934 R PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: mex:Mext_0040 phosphoketolase; phosphoketolase complement(1308499..1310934) Methylobacterium extorquens CM4 7115546 YP_002420097.1 CDS Mchl_1284 NC_011757.1 1311076 1311543 R KEGG: mex:Mext_0041 hypothetical protein; hypothetical protein complement(1311076..1311543) Methylobacterium extorquens CM4 7115547 YP_002420098.1 CDS Mchl_1285 NC_011757.1 1311738 1311971 R KEGG: mex:Mext_0042 hypothetical protein; hypothetical protein complement(1311738..1311971) Methylobacterium extorquens CM4 7115548 YP_002420099.1 CDS Mchl_1286 NC_011757.1 1312230 1313312 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_0043 helix-turn-helix domain-containing protein; AraC family transcriptional regulator complement(1312230..1313312) Methylobacterium extorquens CM4 7115549 YP_002420100.1 CDS Mchl_1287 NC_011757.1 1313856 1314284 R KEGG: met:M446_1577 hypothetical protein; hypothetical protein complement(1313856..1314284) Methylobacterium extorquens CM4 7115550 YP_002420101.1 CDS Mchl_1288 NC_011757.1 1314305 1315426 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_0045 helix-turn-helix domain-containing protein; AraC family transcriptional regulator complement(1314305..1315426) Methylobacterium extorquens CM4 7115551 YP_002420102.1 CDS Mchl_1289 NC_011757.1 1316189 1316620 D KEGG: mex:Mext_0047 hypothetical protein; hypothetical protein 1316189..1316620 Methylobacterium extorquens CM4 7115552 YP_002420103.1 CDS Mchl_1290 NC_011757.1 1316859 1317362 D KEGG: mex:Mext_0048 hypothetical protein; hypothetical protein 1316859..1317362 Methylobacterium extorquens CM4 7115553 YP_002420104.1 CDS Mchl_1291 NC_011757.1 1317566 1319236 R PFAM: sulfate transporter/antisigma-factor antagonist STAS; xanthine/uracil/vitamin C permease; sulfate transporter; KEGG: mex:Mext_0049 sulfate transporter; sulfate transporter complement(1317566..1319236) Methylobacterium extorquens CM4 7115554 YP_002420105.1 CDS Mchl_1292 NC_011757.1 1319750 1320175 D KEGG: mex:Mext_0050 hypothetical protein; hypothetical protein 1319750..1320175 Methylobacterium extorquens CM4 7115555 YP_002420106.1 CDS Mchl_1293 NC_011757.1 1320356 1320877 R PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_0051 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(1320356..1320877) Methylobacterium extorquens CM4 7115556 YP_002420107.1 CDS Mchl_1294 NC_011757.1 1321310 1322284 D PFAM: phosphate acetyl/butaryl transferase; KEGG: mex:Mext_0052 phosphate butyryltransferase; phosphate acetyltransferase 1321310..1322284 Methylobacterium extorquens CM4 7115557 YP_002420108.1 CDS Mchl_1295 NC_011757.1 1322288 1323496 D TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: mex:Mext_0053 acetate kinase; acetate kinase 1322288..1323496 Methylobacterium extorquens CM4 7115558 YP_002420109.1 CDS Mchl_1296 NC_011757.1 1323513 1324007 D KEGG: mex:Mext_0054 hypothetical protein; hypothetical protein 1323513..1324007 Methylobacterium extorquens CM4 7115559 YP_002420110.1 CDS Mchl_1297 NC_011757.1 1324382 1325224 R PFAM: protein of unknown function DUF344; KEGG: mex:Mext_1138 hypothetical protein; hypothetical protein complement(1324382..1325224) Methylobacterium extorquens CM4 7115560 YP_002420111.1 CDS Mchl_1298 NC_011757.1 1325266 1328457 R TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_1139 hydrophobe/amphiphile efflux-1 (HAE1) family protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(1325266..1328457) Methylobacterium extorquens CM4 7115561 YP_002420112.1 CDS Mchl_1299 NC_011757.1 1328463 1329587 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_1140 RND family efflux transporter MFP subunit; efflux transporter RND family MFP subunit complement(1328463..1329587) Methylobacterium extorquens CM4 7115562 YP_002420113.1 CDS Mchl_1301 NC_011757.1 1330046 1330495 R PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mex:Mext_1142 protein of unknown function DUF395 YeeE/YedE; hypothetical protein complement(1330046..1330495) Methylobacterium extorquens CM4 7115564 YP_002420114.1 CDS Mchl_1302 NC_011757.1 1330499 1330924 R PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mex:Mext_1143 protein of unknown function DUF395 YeeE/YedE; hypothetical protein complement(1330499..1330924) Methylobacterium extorquens CM4 7115565 YP_002420115.1 CDS Mchl_1303 NC_011757.1 1331347 1333287 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; E1-E2 ATPase-associated domain protein; KEGG: met:M446_3593 heavy metal translocating P-type ATPase; ATPase P 1331347..1333287 Methylobacterium extorquens CM4 7115566 YP_002420116.1 CDS Mchl_1304 NC_011757.1 1333395 1333733 R PFAM: regulatory protein ArsR; transcriptional regulator TrmB; KEGG: mex:Mext_1145 regulatory protein ArsR; TrmB family transcriptional regulator complement(1333395..1333733) Methylobacterium extorquens CM4 7115567 YP_002420117.1 CDS Mchl_1305 NC_011757.1 1334149 1335129 R KEGG: mpo:Mpop_4661 nitrate ABC transporter ATPase subunits C and D; TIGRFAM: nitrate ABC transporter ATPases C and D; PFAM: ABC transporter; SMART: ATPase AAA; nitrate ABC transporter ATPases C and D complement(1334149..1335129) Methylobacterium extorquens CM4 7115568 YP_002420118.1 CDS Mchl_1306 NC_011757.1 1335138 1335977 R TIGRFAM: nitrate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1147 nitrate ABC transporter inner membrane subunit; nitrate ABC transporter inner membrane subunit complement(1335138..1335977) Methylobacterium extorquens CM4 7115569 YP_002420119.1 CDS Mchl_1307 NC_011757.1 1335982 1337343 R KEGG: mex:Mext_1148 nitrate-binding ABC transporter substrate-binding protein; nitrate-binding ABC transporter substrate-binding protein complement(1335982..1337343) Methylobacterium extorquens CM4 7115570 YP_002420120.1 CDS Mchl_1308 NC_011757.1 1337509 1338843 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rubredoxin-type Fe(Cys)4 protein; KEGG: mex:Mext_1149 rubredoxin-type Fe(Cys)4 protein; Rubredoxin-type Fe(Cys)4 protein complement(1337509..1338843) Methylobacterium extorquens CM4 7115571 YP_002420121.1 CDS Mchl_1309 NC_011757.1 1338840 1340033 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mex:Mext_1150 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(1338840..1340033) Methylobacterium extorquens CM4 7115572 YP_002420122.1 CDS Mchl_1310 NC_011757.1 1340094 1340645 R PFAM: OsmC family protein; KEGG: mex:Mext_1151 OsmC family protein; OsmC family protein complement(1340094..1340645) Methylobacterium extorquens CM4 7115573 YP_002420123.1 CDS Mchl_1311 NC_011757.1 1340858 1342474 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: mex:Mext_1152 sigma-54 factor interaction domain-containing protein; Fis family transcriptional regulator complement(1340858..1342474) Methylobacterium extorquens CM4 7115574 YP_002420124.1 CDS Mchl_1312 NC_011757.1 1342832 1343848 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: mex:Mext_1153 ThiJ/PfpI domain-containing protein; AraC family transcriptional regulator complement(1342832..1343848) Methylobacterium extorquens CM4 7115575 YP_002420125.1 CDS Mchl_1313 NC_011757.1 1343899 1344603 D PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_1154 ThiJ/PfpI domain-containing protein; ThiJ/PfpI domain-containing protein 1343899..1344603 Methylobacterium extorquens CM4 7115576 YP_002420126.1 CDS Mchl_1314 NC_011757.1 1344678 1346246 R TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: mex:Mext_1155 SSS family solute/sodium (Na+) symporter; SSS sodium solute transporter superfamily protein complement(1344678..1346246) Methylobacterium extorquens CM4 7115577 YP_002420127.1 CDS Mchl_1315 NC_011757.1 1346257 1346553 R PFAM: protein of unknown function DUF485; KEGG: mex:Mext_1156 hypothetical protein; hypothetical protein complement(1346257..1346553) Methylobacterium extorquens CM4 7115578 YP_002420128.1 CDS Mchl_1316 NC_011757.1 1346662 1347771 R PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mex:Mext_1157 nitrilase; nitrilase complement(1346662..1347771) Methylobacterium extorquens CM4 7115579 YP_002420129.1 CDS Mchl_1317 NC_011757.1 1347874 1348770 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1158 LysR substrate-binding; LysR family transcriptional regulator complement(1347874..1348770) Methylobacterium extorquens CM4 7115580 YP_002420130.1 CDS Mchl_1318 NC_011757.1 1349427 1350140 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_1159 sigma-70 family RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 1349427..1350140 Methylobacterium extorquens CM4 7115581 YP_002420131.1 CDS Mchl_1319 NC_011757.1 1350355 1350564 D KEGG: mrd:Mrad2831_2336 hypothetical protein; hypothetical protein 1350355..1350564 Methylobacterium extorquens CM4 7115582 YP_002420132.1 CDS Mchl_1320 NC_011757.1 1350626 1350922 R PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_1160 helix-turn-helix domain-containing protein; XRE family transcriptional regulator complement(1350626..1350922) Methylobacterium extorquens CM4 7115583 YP_002420133.1 CDS Mchl_1321 NC_011757.1 1351282 1353045 D KEGG: mex:Mext_1161 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: ATPase AAA; type I secretion system ATPase 1351282..1353045 Methylobacterium extorquens CM4 7115584 YP_002420134.1 CDS Mchl_1322 NC_011757.1 1353055 1354431 D TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD; KEGG: mex:Mext_1162 HlyD family type I secretion membrane fusion protein; HlyD family type I secretion membrane fusion protein 1353055..1354431 Methylobacterium extorquens CM4 7115585 YP_002420135.1 CDS Mchl_1323 NC_011757.1 1354510 1358916 D KEGG: mex:Mext_1163 hypothetical protein; hypothetical protein 1354510..1358916 Methylobacterium extorquens CM4 7115586 YP_002420136.1 CDS Mchl_1324 NC_011757.1 1359067 1361025 R PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1164 cellulose synthase (UDP-forming); cellulose synthase complement(1359067..1361025) Methylobacterium extorquens CM4 7115587 YP_002420137.1 CDS Mchl_1325 NC_011757.1 1361022 1362197 R KEGG: mex:Mext_1165 hypothetical protein; hypothetical protein complement(1361022..1362197) Methylobacterium extorquens CM4 7115588 YP_002420138.1 CDS Mchl_1326 NC_011757.1 1362233 1363987 R KEGG: mex:Mext_1166 hypothetical protein; hypothetical protein complement(1362233..1363987) Methylobacterium extorquens CM4 7115589 YP_002420139.1 CDS Mchl_1327 NC_011757.1 1365143 1365943 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1167 ABC transporter; ABC transporter complement(1365143..1365943) Methylobacterium extorquens CM4 7115590 YP_002420140.1 CDS Mchl_1328 NC_011757.1 1365937 1366935 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1168 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(1365937..1366935) Methylobacterium extorquens CM4 7115591 YP_002420141.1 CDS Mchl_1329 NC_011757.1 1366945 1368030 R KEGG: mex:Mext_1169 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein complement(1366945..1368030) Methylobacterium extorquens CM4 7115592 YP_002420142.1 CDS Mchl_1330 NC_011757.1 1368570 1369715 D PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_1170 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain-containing protein 1368570..1369715 Methylobacterium extorquens CM4 7113652 YP_002420143.1 CDS Mchl_1331 NC_011757.1 1369734 1370831 D PFAM: monooxygenase; KEGG: mex:Mext_1171 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 1369734..1370831 Methylobacterium extorquens CM4 7116304 YP_002420144.1 CDS Mchl_1332 NC_011757.1 1370831 1371772 D TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: mex:Mext_1172 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein 1370831..1371772 Methylobacterium extorquens CM4 7116305 YP_002420145.1 CDS Mchl_1333 NC_011757.1 1371799 1372341 D PFAM: cupin; KEGG: mex:Mext_1173 cupin 2 domain-containing protein; cupin 1371799..1372341 Methylobacterium extorquens CM4 7116306 YP_002420146.1 CDS Mchl_1335 NC_011757.1 1373072 1373275 D KEGG: mex:Mext_1175 hypothetical protein; hypothetical protein 1373072..1373275 Methylobacterium extorquens CM4 7116308 YP_002420147.1 CDS Mchl_1336 NC_011757.1 1373361 1374206 D KEGG: mex:Mext_1176 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein; serine O-acetyltransferase 1373361..1374206 Methylobacterium extorquens CM4 7116309 YP_002420148.1 CDS Mchl_1337 NC_011757.1 1374627 1376018 D PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_1177 cyclic nucleotide-binding; cyclic nucleotide-binding protein 1374627..1376018 Methylobacterium extorquens CM4 7116310 YP_002420149.1 CDS Mchl_1338 NC_011757.1 1376005 1378029 D TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mex:Mext_1178 SufS subfamily cysteine desulfurase; SufS subfamily cysteine desulfurase 1376005..1378029 Methylobacterium extorquens CM4 7116311 YP_002420150.1 CDS Mchl_1339 NC_011757.1 1378567 1379544 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_1181 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1378567..1379544 Methylobacterium extorquens CM4 7116312 YP_002420151.1 CDS Mchl_1340 NC_011757.1 1379763 1380632 D KEGG: mex:Mext_1182 porin; porin 1379763..1380632 Methylobacterium extorquens CM4 7116313 YP_002420152.1 CDS Mchl_1341 NC_011757.1 1381022 1381273 D KEGG: mex:Mext_1183 hypothetical protein; hypothetical protein 1381022..1381273 Methylobacterium extorquens CM4 7116314 YP_002420153.1 CDS Mchl_1342 NC_011757.1 1381285 1381698 D PFAM: protein of unknown function DUF1236; KEGG: mex:Mext_1184 hypothetical protein; hypothetical protein 1381285..1381698 Methylobacterium extorquens CM4 7116315 YP_002420154.1 CDS Mchl_1343 NC_011757.1 1381968 1382189 R hypothetical protein complement(1381968..1382189) Methylobacterium extorquens CM4 7116316 YP_002420155.1 CDS Mchl_1345 NC_011757.1 1383040 1383249 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_1185 cold-shock protein DNA-binding; cold-shock DNA-binding domain-containing protein 1383040..1383249 Methylobacterium extorquens CM4 7116318 YP_002420156.1 CDS Mchl_1346 NC_011757.1 1383457 1383702 D KEGG: mex:Mext_1186 signal peptide; signal peptide 1383457..1383702 Methylobacterium extorquens CM4 7116319 YP_002420157.1 CDS Mchl_1347 NC_011757.1 1383926 1384294 R KEGG: mex:Mext_1187 hypothetical protein; hypothetical protein complement(1383926..1384294) Methylobacterium extorquens CM4 7116320 YP_002420158.1 CDS Mchl_1348 NC_011757.1 1384613 1386571 D KEGG: mex:Mext_1188 hypothetical protein; hypothetical protein 1384613..1386571 Methylobacterium extorquens CM4 7116321 YP_002420159.1 CDS Mchl_1349 NC_011757.1 1386743 1387474 R KEGG: mex:Mext_1189 ABC-type Co2+ transport system, periplasmic component; cobalt ABC transporter periplasmic protein complement(1386743..1387474) Methylobacterium extorquens CM4 7116322 YP_002420160.1 CDS Mchl_1350 NC_011757.1 1387885 1390935 R KEGG: mex:Mext_1190 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase complement(1387885..1390935) Methylobacterium extorquens CM4 7116323 YP_002420161.1 CDS Mchl_1351 NC_011757.1 1391117 1391725 R PFAM: membrane protein of uknown function UCP014873; KEGG: mex:Mext_1191 hypothetical protein; membrane protein complement(1391117..1391725) Methylobacterium extorquens CM4 7116324 YP_002420162.1 CDS Mchl_1352 NC_011757.1 1392229 1394196 D in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen 1392229..1394196 Methylobacterium extorquens CM4 7116325 YP_002420163.1 CDS Mchl_1353 NC_011757.1 1394495 1395538 D KEGG: mex:Mext_1193 hypothetical protein; hypothetical protein 1394495..1395538 Methylobacterium extorquens CM4 7116326 YP_002420164.1 CDS ureE NC_011757.1 1395822 1396286 D involved in the assembly of the urease metallocenter; nickel donor; urease accessory protein UreE 1395822..1396286 Methylobacterium extorquens CM4 7116327 YP_002420165.1 CDS Mchl_1355 NC_011757.1 1396291 1396971 D PFAM: urease accessory protein UreF; KEGG: mex:Mext_1195 urease accessory protein UreF; urease accessory protein UreF 1396291..1396971 Methylobacterium extorquens CM4 7116328 YP_002420166.1 CDS Mchl_1356 NC_011757.1 1396985 1397680 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; bifunctional urease subunit gamma/beta 1396985..1397680 Methylobacterium extorquens CM4 7116329 YP_002420167.1 CDS ureC NC_011757.1 1397696 1399408 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 1397696..1399408 Methylobacterium extorquens CM4 7116330 YP_002420168.1 CDS Mchl_1358 NC_011757.1 1399405 1400049 D TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: mex:Mext_1198 urease accessory protein UreG; urease accessory protein UreG 1399405..1400049 Methylobacterium extorquens CM4 7116331 YP_002420169.1 CDS Mchl_1359 NC_011757.1 1400049 1400933 D PFAM: urease accessory protein UreD; KEGG: mex:Mext_1199 urease accessory protein UreD; urease accessory protein UreD 1400049..1400933 Methylobacterium extorquens CM4 7116332 YP_002420170.1 CDS Mchl_1360 NC_011757.1 1401123 1402364 D TIGRFAM: urea ABC transporter urea binding protein; KEGG: mex:Mext_1200 UreA ABC transporter UreA binding protein; urea ABC transporter urea binding protein 1401123..1402364 Methylobacterium extorquens CM4 7116333 YP_002420171.1 CDS Mchl_1362 NC_011757.1 1403576 1405774 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1202 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(1403576..1405774) Methylobacterium extorquens CM4 7116335 YP_002420172.1 CDS Mchl_1363 NC_011757.1 1406524 1407714 D KEGG: mex:Mext_1203 hypothetical protein; hypothetical protein 1406524..1407714 Methylobacterium extorquens CM4 7116336 YP_002420173.1 CDS Mchl_1364 NC_011757.1 1407838 1408206 R KEGG: mex:Mext_1204 hypothetical protein; hypothetical protein complement(1407838..1408206) Methylobacterium extorquens CM4 7116337 YP_002420174.1 CDS Mchl_1365 NC_011757.1 1408239 1408682 R PFAM: OsmC family protein; KEGG: mex:Mext_1205 OsmC family protein; OsmC family protein complement(1408239..1408682) Methylobacterium extorquens CM4 7116338 YP_002420175.1 CDS Mchl_1366 NC_011757.1 1408949 1409398 D KEGG: mex:Mext_1206 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor protein 1408949..1409398 Methylobacterium extorquens CM4 7116339 YP_002420176.1 CDS Mchl_1367 NC_011757.1 1409499 1410749 D catalyzes the formation of oxalyl-CoA from oxalate and formyl-CoA; formyl-coenzyme A transferase 1409499..1410749 Methylobacterium extorquens CM4 7116340 YP_002420177.1 CDS Mchl_1368 NC_011757.1 1410989 1411708 R PFAM: phospholipase/carboxylesterase; KEGG: mex:Mext_1208 phospholipase/carboxylesterase; phospholipase/carboxylesterase complement(1410989..1411708) Methylobacterium extorquens CM4 7116341 YP_002420178.1 CDS Mchl_1369 NC_011757.1 1411974 1413725 R catalyzes the formation of formyl-CoA from oxalyl-CoA; oxalyl-CoA decarboxylase complement(1411974..1413725) Methylobacterium extorquens CM4 7116342 YP_002420179.1 CDS Mchl_1370 NC_011757.1 1414201 1416546 R PFAM: Domain of unknown function DUF1929; KEGG: mex:Mext_1210 galactose oxidase; Galactose oxidase complement(1414201..1416546) Methylobacterium extorquens CM4 7116343 YP_002420180.1 CDS Mchl_1371 NC_011757.1 1416844 1418169 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1211 major facilitator transporter; major facilitator superfamily protein complement(1416844..1418169) Methylobacterium extorquens CM4 7116344 YP_002420181.1 CDS Mchl_1372 NC_011757.1 1418434 1419744 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1212 major facilitator transporter; major facilitator superfamily protein complement(1418434..1419744) Methylobacterium extorquens CM4 7116345 YP_002420182.1 CDS Mchl_1373 NC_011757.1 1420285 1420725 D PFAM: CBS domain containing protein; KEGG: mex:Mext_1213 CBS domain-containing protein; signal transduction protein with CBS domains 1420285..1420725 Methylobacterium extorquens CM4 7116346 YP_002420183.1 CDS Mchl_1374 NC_011757.1 1420880 1421173 D KEGG: mex:Mext_1214 hypothetical protein; hypothetical protein 1420880..1421173 Methylobacterium extorquens CM4 7116347 YP_002420184.1 CDS Mchl_1375 NC_011757.1 1421196 1423052 D KEGG: mex:Mext_1215 hypothetical protein; hypothetical protein 1421196..1423052 Methylobacterium extorquens CM4 7116348 YP_002420185.1 CDS Mchl_1376 NC_011757.1 1423272 1423439 D KEGG: mex:Mext_1216 hypothetical protein; hypothetical protein 1423272..1423439 Methylobacterium extorquens CM4 7116349 YP_002420186.1 CDS Mchl_1377 NC_011757.1 1423421 1423645 R KEGG: mpo:Mpop_1156 hypothetical protein; hypothetical protein complement(1423421..1423645) Methylobacterium extorquens CM4 7116350 YP_002420187.1 CDS Mchl_1378 NC_011757.1 1423787 1425076 R TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mex:Mext_1217 formyl-CoA transferase; formyl-CoA transferase complement(1423787..1425076) Methylobacterium extorquens CM4 7116351 YP_002420188.1 CDS Mchl_1379 NC_011757.1 1425497 1426180 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_1218 GntR domain-containing protein; GntR family transcriptional regulator 1425497..1426180 Methylobacterium extorquens CM4 7116352 YP_002420189.1 CDS Mchl_1380 NC_011757.1 1426310 1427410 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_1219 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K complement(1426310..1427410) Methylobacterium extorquens CM4 7116353 YP_002420190.1 CDS Mchl_1381 NC_011757.1 1427542 1429032 R PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: mex:Mext_1220 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase complement(1427542..1429032) Methylobacterium extorquens CM4 7116354 YP_002420191.1 CDS Mchl_1382 NC_011757.1 1429304 1429942 D KEGG: mex:Mext_1221 hypothetical protein; hypothetical protein 1429304..1429942 Methylobacterium extorquens CM4 7116355 YP_002420192.1 CDS Mchl_1383 NC_011757.1 1430106 1430543 D KEGG: mex:Mext_1222 hypothetical protein; hypothetical protein 1430106..1430543 Methylobacterium extorquens CM4 7116356 YP_002420193.1 CDS Mchl_1384 NC_011757.1 1430636 1430920 D KEGG: mex:Mext_1223 hypothetical protein; hypothetical protein 1430636..1430920 Methylobacterium extorquens CM4 7116357 YP_002420194.1 CDS Mchl_1385 NC_011757.1 1431014 1432255 R PFAM: monooxygenase FAD-binding; KEGG: mex:Mext_1224 monooxygenase FAD-binding; FAD-binding monooxygenase complement(1431014..1432255) Methylobacterium extorquens CM4 7116358 YP_002420195.1 CDS Mchl_1386 NC_011757.1 1433088 1433444 D TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: mex:Mext_1225 queuosine biosynthesis protein QueD; queuosine biosynthesis protein QueD 1433088..1433444 Methylobacterium extorquens CM4 7116359 YP_002420196.1 CDS Mchl_1387 NC_011757.1 1433447 1434178 D TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: mex:Mext_1226 ExsB protein; exsB protein 1433447..1434178 Methylobacterium extorquens CM4 7116360 YP_002420197.1 CDS Mchl_1388 NC_011757.1 1434189 1434926 D PFAM: LmbE family protein; KEGG: mex:Mext_1227 LmbE family protein; LmbE family protein 1434189..1434926 Methylobacterium extorquens CM4 7116361 YP_002420198.1 CDS Mchl_1389 NC_011757.1 1435017 1435868 D PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1228 glycosyl transferase; family 2 glycosyl transferase 1435017..1435868 Methylobacterium extorquens CM4 7116362 YP_002420199.1 CDS Mchl_1390 NC_011757.1 1436262 1436444 D KEGG: mex:Mext_1229 hypothetical protein; hypothetical protein 1436262..1436444 Methylobacterium extorquens CM4 7116363 YP_002420200.1 CDS Mchl_1391 NC_011757.1 1436445 1436672 D KEGG: mpo:Mpop_1168 hypothetical protein; hypothetical protein 1436445..1436672 Methylobacterium extorquens CM4 7116364 YP_002420201.1 CDS Mchl_1392 NC_011757.1 1436735 1437028 D KEGG: mex:Mext_1230 hypothetical protein; hypothetical protein 1436735..1437028 Methylobacterium extorquens CM4 7116365 YP_002420202.1 CDS Mchl_1393 NC_011757.1 1437176 1438225 R KEGG: mex:Mext_1231 hypothetical protein; hypothetical protein complement(1437176..1438225) Methylobacterium extorquens CM4 7116366 YP_002420203.1 CDS Mchl_1394 NC_011757.1 1438286 1439374 R PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1232 glycosyl transferase; family 2 glycosyl transferase complement(1438286..1439374) Methylobacterium extorquens CM4 7116367 YP_002420204.1 CDS Mchl_1395 NC_011757.1 1439379 1440479 R PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1233 glycosyl transferase group 1; group 1 glycosyl transferase complement(1439379..1440479) Methylobacterium extorquens CM4 7116368 YP_002420205.1 CDS Mchl_1396 NC_011757.1 1440988 1441311 R TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: mex:Mext_1234 HPr family phosphocarrier protein; phosphocarrier, HPr family complement(1440988..1441311) Methylobacterium extorquens CM4 7116369 YP_002420206.1 CDS Mchl_1397 NC_011757.1 1441443 1441844 R PFAM: PTS system fructose subfamily IIA component; KEGG: mex:Mext_1235 PTS system fructose subfamily IIA component; PTS system fructose subfamily IIA component complement(1441443..1441844) Methylobacterium extorquens CM4 7116370 YP_002420207.1 CDS Mchl_1398 NC_011757.1 1441970 1442509 R KEGG: mex:Mext_1236 HPr kinase; HPr kinase complement(1441970..1442509) Methylobacterium extorquens CM4 7116371 YP_002420208.1 CDS Mchl_1399 NC_011757.1 1442506 1444356 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1237 ATPase domain-containing protein; histidine kinase complement(1442506..1444356) Methylobacterium extorquens CM4 7116372 YP_002420209.1 CDS Mchl_1400 NC_011757.1 1444385 1445098 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpo:Mpop_1179 transcriptional regulator; transcriptional regulator complement(1444385..1445098) Methylobacterium extorquens CM4 7116373 YP_002420210.1 CDS Mchl_1401 NC_011757.1 1445497 1446312 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_1239 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1445497..1446312 Methylobacterium extorquens CM4 7116374 YP_002420211.1 CDS Mchl_1402 NC_011757.1 1446473 1448278 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1446473..1448278 Methylobacterium extorquens CM4 7116375 YP_002420212.1 CDS Mchl_1403 NC_011757.1 1448718 1449971 D TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: mex:Mext_1241 RND family efflux transporter MFP subunit; efflux transporter RND family MFP subunit 1448718..1449971 Methylobacterium extorquens CM4 7116376 YP_002420213.1 CDS Mchl_1404 NC_011757.1 1450063 1453233 D TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_1242 CzcA family heavy metal efflux protein; CzcA family heavy metal efflux pump 1450063..1453233 Methylobacterium extorquens CM4 7116377 YP_002420214.1 CDS Mchl_1406 NC_011757.1 1453688 1454761 R KEGG: mex:Mext_1244 hypothetical protein; hypothetical protein complement(1453688..1454761) Methylobacterium extorquens CM4 7116379 YP_002420215.1 CDS Mchl_1407 NC_011757.1 1454809 1457862 R PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: mex:Mext_1245 glycosyl transferase family protein; glycosyl transferase family protein complement(1454809..1457862) Methylobacterium extorquens CM4 7116380 YP_002420216.1 CDS Mchl_1408 NC_011757.1 1458080 1459279 R KEGG: mex:Mext_1247 hypothetical protein; hypothetical protein complement(1458080..1459279) Methylobacterium extorquens CM4 7116381 YP_002420217.1 CDS Mchl_1409 NC_011757.1 1459483 1459899 D PFAM: flagellar FlbT family protein; KEGG: mex:Mext_1248 flagellar FlbT family protein; flagellar FlbT family protein 1459483..1459899 Methylobacterium extorquens CM4 7116382 YP_002420218.1 CDS Mchl_1410 NC_011757.1 1459998 1460213 R KEGG: mex:Mext_1249 hypothetical protein; hypothetical protein complement(1459998..1460213) Methylobacterium extorquens CM4 7116383 YP_002420219.1 CDS Mchl_1411 NC_011757.1 1460308 1461471 R PFAM: acyltransferase 3; KEGG: mex:Mext_1250 acyltransferase 3; acyltransferase 3 complement(1460308..1461471) Methylobacterium extorquens CM4 7116384 YP_002420220.1 CDS Mchl_1412 NC_011757.1 1461775 1463160 D PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mex:Mext_1251 metal-dependent phosphohydrolase; metal dependent phosphohydrolase 1461775..1463160 Methylobacterium extorquens CM4 7116548 YP_002420221.1 CDS Mchl_1413 NC_011757.1 1463274 1463651 R KEGG: mex:Mext_1252 hypothetical protein; hypothetical protein complement(1463274..1463651) Methylobacterium extorquens CM4 7116631 YP_002420222.1 CDS Mchl_1414 NC_011757.1 1463828 1464256 D PFAM: protein of unknown function DUF442; KEGG: mex:Mext_1253 hypothetical protein; hypothetical protein 1463828..1464256 Methylobacterium extorquens CM4 7116632 YP_002420223.1 CDS Mchl_1415 NC_011757.1 1464375 1465127 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential; methionine aminopeptidase complement(1464375..1465127) Methylobacterium extorquens CM4 7116633 YP_002420224.1 CDS Mchl_1416 NC_011757.1 1465736 1466395 D KEGG: mex:Mext_1255 hypothetical protein; hypothetical protein 1465736..1466395 Methylobacterium extorquens CM4 7116634 YP_002420225.1 CDS Mchl_1417 NC_011757.1 1466430 1467347 R KEGG: mex:Mext_1256 hypothetical protein; hypothetical protein complement(1466430..1467347) Methylobacterium extorquens CM4 7116635 YP_002420226.1 CDS Mchl_1418 NC_011757.1 1467722 1468579 R PFAM: protein of unknown function DUF849; KEGG: mex:Mext_1257 hypothetical protein; hypothetical protein complement(1467722..1468579) Methylobacterium extorquens CM4 7116636 YP_002420227.1 CDS Mchl_1419 NC_011757.1 1468579 1469934 R PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: mex:Mext_1258 sigma-54 factor interaction domain-containing protein; Fis family transcriptional regulator complement(1468579..1469934) Methylobacterium extorquens CM4 7116637 YP_002420228.1 CDS Mchl_1420 NC_011757.1 1469924 1471789 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1259 ATPase domain-containing protein; histidine kinase complement(1469924..1471789) Methylobacterium extorquens CM4 7116638 YP_002420229.1 CDS Mchl_1421 NC_011757.1 1472053 1472934 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1260 ABC transporter; ABC transporter complement(1472053..1472934) Methylobacterium extorquens CM4 7116639 YP_002420230.1 CDS Mchl_1422 NC_011757.1 1472943 1473764 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1261 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(1472943..1473764) Methylobacterium extorquens CM4 7116640 YP_002420231.1 CDS Mchl_1423 NC_011757.1 1473777 1474757 R PFAM: extracellular solute-binding protein family 3; KEGG: mex:Mext_1262 NMT1/THI5-like domain-containing protein; family 3 extracellular solute-binding protein complement(1473777..1474757) Methylobacterium extorquens CM4 7116641 YP_002420232.1 CDS minC NC_011757.1 1475020 1475748 R blocks the formation of polar Z-ring septums; septum formation inhibitor complement(1475020..1475748) Methylobacterium extorquens CM4 7116642 YP_002420233.1 CDS Mchl_1425 NC_011757.1 1475875 1477164 R KEGG: mex:Mext_1264 hypothetical protein; hypothetical protein complement(1475875..1477164) Methylobacterium extorquens CM4 7116643 YP_002420234.1 CDS Mchl_1426 NC_011757.1 1477482 1479308 D TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: mex:Mext_1265 GTP-binding protein TypA; GTP-binding protein TypA 1477482..1479308 Methylobacterium extorquens CM4 7116644 YP_002420235.1 CDS Mchl_1427 NC_011757.1 1479451 1481139 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; CHASE3 domain protein; KEGG: mex:Mext_1266 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1479451..1481139) Methylobacterium extorquens CM4 7116645 YP_002420236.1 CDS minC NC_011757.1 1481559 1482197 D blocks the formation of polar Z-ring septums; septum formation inhibitor 1481559..1482197 Methylobacterium extorquens CM4 7116646 YP_002420237.1 CDS Mchl_1429 NC_011757.1 1482210 1483025 D TIGRFAM: septum site-determining protein MinD; PFAM: cobyrinic acid ac-diamide synthase; KEGG: mex:Mext_1268 septum site-determining protein MinD; septum site-determining protein MinD 1482210..1483025 Methylobacterium extorquens CM4 7116647 YP_002420238.1 CDS Mchl_1430 NC_011757.1 1483022 1483309 D TIGRFAM: cell division topological specificity factor MinE; PFAM: septum formation topological specificity factor MinE; KEGG: mex:Mext_1269 cell division topological specificity factor MinE; cell division topological specificity factor MinE 1483022..1483309 Methylobacterium extorquens CM4 7116648 YP_002420239.1 CDS Mchl_1432 NC_011757.1 1483594 1484973 R PFAM: cytochrome P450; KEGG: mex:Mext_1270 cytochrome P450; cytochrome P450 complement(1483594..1484973) Methylobacterium extorquens CM4 7116650 YP_002420240.1 CDS Mchl_1433 NC_011757.1 1485230 1486123 D PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: mex:Mext_1271 SMP-30/gluconolaconase/LRE domain-containing protein; SMP-30/gluconolaconase/LRE domain-containing protein 1485230..1486123 Methylobacterium extorquens CM4 7116651 YP_002420241.1 CDS Mchl_1434 NC_011757.1 1486282 1488132 D PFAM: glycoside hydrolase 15-related; KEGG: mpo:Mpop_1274 glycoside hydrolase 15-related; glycoside hydrolase 15-like protein 1486282..1488132 Methylobacterium extorquens CM4 7116652 YP_002420242.1 CDS Mchl_1435 NC_011757.1 1488141 1489103 D KEGG: mex:Mext_1273 dehydrogenase protein; dehydrogenase protein 1488141..1489103 Methylobacterium extorquens CM4 7116653 YP_002420243.1 CDS Mchl_1436 NC_011757.1 1490128 1491573 D PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_1274 carbohydrate-selective porin OprB; carbohydrate-selective porin OprB 1490128..1491573 Methylobacterium extorquens CM4 7116654 YP_002420244.1 CDS Mchl_1439 NC_011757.1 1492672 1494294 D PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_1277 extracellular solute-binding protein; family 5 extracellular solute-binding protein 1492672..1494294 Methylobacterium extorquens CM4 7116657 YP_002420245.1 CDS Mchl_1440 NC_011757.1 1494453 1495406 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1278 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 1494453..1495406 Methylobacterium extorquens CM4 7116658 YP_002420246.1 CDS Mchl_1441 NC_011757.1 1495423 1496358 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1279 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 1495423..1496358 Methylobacterium extorquens CM4 7116659 YP_002420247.1 CDS Mchl_1442 NC_011757.1 1496355 1497410 D KEGG: mex:Mext_1280 oligopeptide/dipeptide ABC transporter ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA; oligopeptide/dipeptide ABC transporter ATPase 1496355..1497410 Methylobacterium extorquens CM4 7116660 YP_002420248.1 CDS Mchl_1443 NC_011757.1 1497407 1498441 D KEGG: mex:Mext_1281 oligopeptide/dipeptide ABC transporter ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA; oligopeptide/dipeptide ABC transporter ATPase 1497407..1498441 Methylobacterium extorquens CM4 7116661 YP_002420249.1 CDS Mchl_1444 NC_011757.1 1498802 1500301 R TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: mex:Mext_1282 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase complement(1498802..1500301) Methylobacterium extorquens CM4 7116662 YP_002420250.1 CDS Mchl_1445 NC_011757.1 1500367 1500843 R PFAM: cyclase/dehydrase; carbon monoxide dehydrogenase subunit G; KEGG: mex:Mext_1283 carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G complement(1500367..1500843) Methylobacterium extorquens CM4 7116663 YP_002420251.1 CDS Mchl_1446 NC_011757.1 1500873 1501577 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1284 ABC transporter; ABC transporter complement(1500873..1501577) Methylobacterium extorquens CM4 7116664 YP_002420252.1 CDS Mchl_1447 NC_011757.1 1501570 1502340 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1285 ABC transporter; ABC transporter complement(1501570..1502340) Methylobacterium extorquens CM4 7116665 YP_002420253.1 CDS Mchl_1448 NC_011757.1 1502337 1503350 R PFAM: inner-membrane translocator; KEGG: mex:Mext_1286 inner-membrane translocator; inner-membrane translocator complement(1502337..1503350) Methylobacterium extorquens CM4 7116666 YP_002420254.1 CDS Mchl_1449 NC_011757.1 1503362 1504252 R PFAM: inner-membrane translocator; KEGG: mex:Mext_1287 inner-membrane translocator; inner-membrane translocator complement(1503362..1504252) Methylobacterium extorquens CM4 7116667 YP_002420255.1 CDS Mchl_1450 NC_011757.1 1504270 1505517 R PFAM: extracellular ligand-binding receptor; KEGG: mex:Mext_1288 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(1504270..1505517) Methylobacterium extorquens CM4 7116668 YP_002420256.1 CDS Mchl_1451 NC_011757.1 1505584 1507962 R PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_1289 carbon-monoxide dehydrogenase (acceptor); carbon-monoxide dehydrogenase (acceptor) complement(1505584..1507962) Methylobacterium extorquens CM4 7116669 YP_002420257.1 CDS Mchl_1452 NC_011757.1 1507959 1508462 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_1290 2Fe-2S iron-sulfur cluster binding domain-containing protein; (2Fe-2S)-binding domain-containing protein complement(1507959..1508462) Methylobacterium extorquens CM4 7116670 YP_002420258.1 CDS Mchl_1453 NC_011757.1 1508459 1509337 R PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: mex:Mext_1291 molybdopterin dehydrogenase FAD-binding; FAD-binding molybdopterin dehydrogenase complement(1508459..1509337) Methylobacterium extorquens CM4 7116671 YP_002420259.1 CDS Mchl_1454 NC_011757.1 1509466 1510161 D PFAM: regulatory protein TetR; KEGG: mex:Mext_1292 regulatory protein TetR; TetR family transcriptional regulator 1509466..1510161 Methylobacterium extorquens CM4 7116672 YP_002420260.1 CDS Mchl_1455 NC_011757.1 1510903 1512195 D KEGG: mex:Mext_1293 amidase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; hydantoinase/carbamoylase family amidase 1510903..1512195 Methylobacterium extorquens CM4 7116673 YP_002420261.1 CDS Mchl_1456 NC_011757.1 1512546 1513883 D catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 1512546..1513883 Methylobacterium extorquens CM4 7116674 YP_002420262.1 CDS Mchl_1459 NC_011757.1 1515268 1515576 R KEGG: mex:Mext_1297 hypothetical protein; hypothetical protein complement(1515268..1515576) Methylobacterium extorquens CM4 7116677 YP_002420263.1 CDS Mchl_1460 NC_011757.1 1515850 1519185 R PFAM: helicase; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase; SMART: DEAD-like helicases; KEGG: mex:Mext_1298 DEAD/DEAH box helicase domain-containing protein; DEAD/DEAH box helicase complement(1515850..1519185) Methylobacterium extorquens CM4 7116678 YP_002420264.1 CDS Mchl_1461 NC_011757.1 1519464 1520702 R TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mex:Mext_1299 ammonium transporter; ammonium transporter complement(1519464..1520702) Methylobacterium extorquens CM4 7116679 YP_002420265.1 CDS Mchl_1462 NC_011757.1 1520796 1521809 R TIGRFAM: urea transporter; PFAM: Urea transporter; KEGG: mex:Mext_1300 UreA transporter; urea transporter complement(1520796..1521809) Methylobacterium extorquens CM4 7116680 YP_002420266.1 CDS Mchl_1463 NC_011757.1 1521825 1522760 R PFAM: urease accessory protein UreD; KEGG: mex:Mext_1301 urease accessory protein UreD; urease accessory protein UreD complement(1521825..1522760) Methylobacterium extorquens CM4 7116681 YP_002420267.1 CDS Mchl_1464 NC_011757.1 1522765 1523412 R TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: mex:Mext_1302 urease accessory protein UreG; urease accessory protein UreG complement(1522765..1523412) Methylobacterium extorquens CM4 7116682 YP_002420268.1 CDS Mchl_1465 NC_011757.1 1523433 1524155 R PFAM: urease accessory protein UreF; KEGG: mex:Mext_1303 urease accessory protein UreF; urease accessory protein UreF complement(1523433..1524155) Methylobacterium extorquens CM4 7116683 YP_002420269.1 CDS Mchl_1466 NC_011757.1 1524155 1524808 R PFAM: urease accessory protein UreE; KEGG: mex:Mext_1304 UreE urease accessory domain-containing protein; urease accessory protein UreE complement(1524155..1524808) Methylobacterium extorquens CM4 7116684 YP_002420270.1 CDS ccrB NC_011757.1 1524832 1525215 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(1524832..1525215) Methylobacterium extorquens CM4 7116685 YP_002420271.1 CDS Mchl_1468 NC_011757.1 1525225 1525608 R TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: mex:Mext_1306 CrcB protein; CrcB protein complement(1525225..1525608) Methylobacterium extorquens CM4 7116686 YP_002420272.1 CDS ureC NC_011757.1 1525670 1527388 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(1525670..1527388) Methylobacterium extorquens CM4 7116687 YP_002420273.1 CDS Mchl_1470 NC_011757.1 1527425 1527835 R KEGG: mex:Mext_1308 urease subunit beta; TIGRFAM: urease, subunit beta; PFAM: urease subunit beta; urease subunit beta complement(1527425..1527835) Methylobacterium extorquens CM4 7116688 YP_002420274.1 CDS Mchl_1471 NC_011757.1 1527860 1528162 R KEGG: mex:Mext_1309 urease subunit gamma; TIGRFAM: urease subunit gamma; PFAM: urease subunit gamma region; urease subunit gamma complement(1527860..1528162) Methylobacterium extorquens CM4 7116689 YP_002420275.1 CDS Mchl_1472 NC_011757.1 1528802 1530916 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1310 TonB-dependent receptor plug; TonB-dependent receptor plug 1528802..1530916 Methylobacterium extorquens CM4 7116690 YP_002420276.1 CDS Mchl_1473 NC_011757.1 1530913 1531644 D KEGG: mex:Mext_1311 ABC-type Co2+ transport system, periplasmic component; cobalt ABC transporter periplasmic protein 1530913..1531644 Methylobacterium extorquens CM4 7116691 YP_002420277.1 CDS Mchl_1474 NC_011757.1 1532047 1532658 D KEGG: mex:Mext_1312 hypothetical protein; hypothetical protein 1532047..1532658 Methylobacterium extorquens CM4 7116692 YP_002420278.1 CDS Mchl_1476 NC_011757.1 1533213 1533554 D KEGG: mex:Mext_1314 hypothetical protein; hypothetical protein 1533213..1533554 Methylobacterium extorquens CM4 7116694 YP_002420279.1 CDS Mchl_1477 NC_011757.1 1534172 1534600 D KEGG: mrd:Mrad2831_1299 hypothetical protein; hypothetical protein 1534172..1534600 Methylobacterium extorquens CM4 7116696 YP_002420280.1 CDS Mchl_1478 NC_011757.1 1534720 1535475 R PFAM: protein of unknown function DUF72; KEGG: mrd:Mrad2831_5900 hypothetical protein; hypothetical protein complement(1534720..1535475) Methylobacterium extorquens CM4 7116697 YP_002420281.1 CDS Mchl_1479 NC_011757.1 1536319 1537098 R KEGG: mrd:Mrad2831_4716 hypothetical protein; hypothetical protein complement(1536319..1537098) Methylobacterium extorquens CM4 7116698 YP_002420282.1 CDS Mchl_1480 NC_011757.1 1537285 1537962 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: acr:Acry_1146 metal-dependent phosphohydrolase; metal dependent phosphohydrolase complement(1537285..1537962) Methylobacterium extorquens CM4 7116699 YP_002420283.1 CDS Mchl_1481 NC_011757.1 1538081 1539046 D PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bac:BamMC406_5748 transcriptional regulator, AraC family; AraC family transcriptional regulator 1538081..1539046 Methylobacterium extorquens CM4 7116700 YP_002420284.1 CDS Mchl_1482 NC_011757.1 1539122 1539964 R KEGG: met:M446_0536 hypothetical protein; hypothetical protein complement(1539122..1539964) Methylobacterium extorquens CM4 7116701 YP_002420285.1 CDS Mchl_1484 NC_011757.1 1540615 1541013 R KEGG: mrd:Mrad2831_5275 hypothetical protein; hypothetical protein complement(1540615..1541013) Methylobacterium extorquens CM4 7116703 YP_002420286.1 CDS Mchl_1485 NC_011757.1 1541405 1541671 R KEGG: mex:Mext_1890 hypothetical protein; hypothetical protein complement(1541405..1541671) Methylobacterium extorquens CM4 7116704 YP_002420287.1 CDS Mchl_1486 NC_011757.1 1542105 1543526 R PFAM: ATP-binding region ATPase domain protein; KEGG: met:M446_5593 integral membrane sensor signal transduction histidine kinase; histidine kinase complement(1542105..1543526) Methylobacterium extorquens CM4 7116705 YP_002420288.1 CDS Mchl_1489 NC_011757.1 1545996 1546364 D TIGRFAM: lipoprotein A; PFAM: Rare lipoprotein A; KEGG: mex:Mext_0135 lipoprotein A; lipoprotein A 1545996..1546364 Methylobacterium extorquens CM4 7116708 YP_002420289.1 CDS Mchl_1490 NC_011757.1 1546494 1547261 D KEGG: mex:Mext_0134 hypothetical protein; hypothetical protein 1546494..1547261 Methylobacterium extorquens CM4 7116709 YP_002420290.1 CDS Mchl_1491 NC_011757.1 1547365 1548060 D hypothetical protein 1547365..1548060 Methylobacterium extorquens CM4 7116710 YP_002420291.1 CDS Mchl_1492 NC_011757.1 1548057 1548338 D KEGG: mpo:Mpop_4885 hypothetical protein; hypothetical protein 1548057..1548338 Methylobacterium extorquens CM4 7116711 YP_002420292.1 CDS Mchl_1493 NC_011757.1 1548446 1549558 R PFAM: regulatory protein LuxR; KEGG: met:M446_4636 LuxR family transcriptional regulator; LuxR family transcriptional regulator complement(1548446..1549558) Methylobacterium extorquens CM4 7115101 YP_002420293.1 CDS Mchl_1494 NC_011757.1 1549916 1550752 R PFAM: integrase catalytic region; KEGG: mex:Mext_3531 integrase catalytic region; integrase catalytic subunit complement(1549916..1550752) Methylobacterium extorquens CM4 7115104 YP_002420294.1 CDS Mchl_1495 NC_011757.1 1550776 1551057 R PFAM: transposase IS3/IS911 family protein; KEGG: mex:Mext_3530 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(1550776..1551057) Methylobacterium extorquens CM4 7115105 YP_002420295.1 CDS Mchl_1496 NC_011757.1 1551116 1551277 R hypothetical protein complement(1551116..1551277) Methylobacterium extorquens CM4 7115106 YP_002420296.1 CDS Mchl_1497 NC_011757.1 1551309 1551614 R KEGG: mpo:Mpop_1280 hypothetical protein; hypothetical protein complement(1551309..1551614) Methylobacterium extorquens CM4 7115107 YP_002420297.1 CDS Mchl_1498 NC_011757.1 1551625 1552302 R PFAM: Sel1 domain protein repeat-containing protein; KEGG: mpo:Mpop_1281 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein complement(1551625..1552302) Methylobacterium extorquens CM4 7115108 YP_002420298.1 CDS Mchl_1499 NC_011757.1 1552320 1553408 R KEGG: mpo:Mpop_1282 hypothetical protein; hypothetical protein complement(1552320..1553408) Methylobacterium extorquens CM4 7115109 YP_002420299.1 CDS Mchl_1500 NC_011757.1 1553557 1555989 R KEGG: mpo:Mpop_1283 large subunit of N,N-dimethylformamidase; large subunit of N,N-dimethylformamidase complement(1553557..1555989) Methylobacterium extorquens CM4 7115110 YP_002420300.1 CDS Mchl_1501 NC_011757.1 1556112 1556552 R KEGG: mpo:Mpop_1284 hypothetical protein; hypothetical protein complement(1556112..1556552) Methylobacterium extorquens CM4 7115111 YP_002420301.1 CDS Mchl_1502 NC_011757.1 1556922 1557620 R KEGG: mpo:Mpop_1285 UreA ABC transporter ATP-binding protein UrtE; TIGRFAM: urea ABC transporter ATP-binding protein UrtE; PFAM: ABC transporter; SMART: ATPase AAA; urea ABC transporter ATP-binding protein UrtE complement(1556922..1557620) Methylobacterium extorquens CM4 7115112 YP_002420302.1 CDS Mchl_1503 NC_011757.1 1557623 1558363 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mpo:Mpop_1286 ABC transporter; ABC transporter complement(1557623..1558363) Methylobacterium extorquens CM4 7115113 YP_002420303.1 CDS Mchl_1504 NC_011757.1 1558379 1559500 R TIGRFAM: urea ABC transporter permease UrtC; PFAM: inner-membrane translocator; KEGG: mpo:Mpop_1287 UreA ABC transporter permease UrtC; urea ABC transporter permease UrtC complement(1558379..1559500) Methylobacterium extorquens CM4 7115114 YP_002420304.1 CDS Mchl_1505 NC_011757.1 1559550 1560434 R PFAM: inner-membrane translocator; KEGG: mpo:Mpop_1288 inner-membrane translocator; inner-membrane translocator complement(1559550..1560434) Methylobacterium extorquens CM4 7115115 YP_002420305.1 CDS Mchl_1506 NC_011757.1 1560502 1561812 R KEGG: mpo:Mpop_1289 substrate-binding component of ABC transporter; ABC transporter substrate-binding protein complement(1560502..1561812) Methylobacterium extorquens CM4 7115116 YP_002420306.1 CDS Mchl_1509 NC_011757.1 1562910 1563326 D PFAM: protein of unknown function DUF1486; KEGG: mpo:Mpop_3619 protein of unknown function DUF1486; hypothetical protein 1562910..1563326 Methylobacterium extorquens CM4 7115119 YP_002420307.1 CDS Mchl_1511 NC_011757.1 1564448 1565572 D PFAM: glucose sorbosone dehydrogenase; KEGG: mex:Mext_1315 glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase 1564448..1565572 Methylobacterium extorquens CM4 7115121 YP_002420308.1 CDS Mchl_1512 NC_011757.1 1565606 1566541 R PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_1316 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(1565606..1566541) Methylobacterium extorquens CM4 7115122 YP_002420309.1 CDS Mchl_1513 NC_011757.1 1566934 1567140 R KEGG: mex:Mext_1317 hypothetical protein; hypothetical protein complement(1566934..1567140) Methylobacterium extorquens CM4 7115123 YP_002420310.1 CDS Mchl_1514 NC_011757.1 1567621 1568286 D KEGG: mex:Mext_1318 hypothetical protein; hypothetical protein 1567621..1568286 Methylobacterium extorquens CM4 7115124 YP_002420311.1 CDS Mchl_1515 NC_011757.1 1568303 1569808 D PFAM: protein of unknown function DUF112 transmembrane; KEGG: mex:Mext_1319 hypothetical protein; hypothetical protein 1568303..1569808 Methylobacterium extorquens CM4 7115125 YP_002420312.1 CDS Mchl_1516 NC_011757.1 1569874 1570845 D PFAM: conserved hypothetical protein; KEGG: mex:Mext_1320 hypothetical protein; hypothetical protein 1569874..1570845 Methylobacterium extorquens CM4 7115126 YP_002420313.1 CDS Mchl_1517 NC_011757.1 1571230 1571970 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_1321 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1571230..1571970 Methylobacterium extorquens CM4 7115127 YP_002420314.1 CDS Mchl_1520 NC_011757.1 1573090 1573728 R KEGG: mex:Mext_1322 phosphoglycerate mutase 1 family protein; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: phosphoglycerate mutase; phosphoglycerate mutase 1 family complement(1573090..1573728) Methylobacterium extorquens CM4 7115130 YP_002420315.1 CDS Mchl_1521 NC_011757.1 1574000 1574467 D KEGG: mex:Mext_1323 hypothetical protein; hypothetical protein 1574000..1574467 Methylobacterium extorquens CM4 7115131 YP_002420316.1 CDS Mchl_1522 NC_011757.1 1574691 1574876 R KEGG: mex:Mext_1324 hypothetical protein; hypothetical protein complement(1574691..1574876) Methylobacterium extorquens CM4 7115132 YP_002420317.1 CDS Mchl_1523 NC_011757.1 1575131 1575349 D KEGG: mrd:Mrad2831_6030 hypothetical protein; hypothetical protein 1575131..1575349 Methylobacterium extorquens CM4 7115133 YP_002420318.1 CDS Mchl_1524 NC_011757.1 1575365 1575544 D hypothetical protein 1575365..1575544 Methylobacterium extorquens CM4 7115134 YP_002420319.1 CDS Mchl_1525 NC_011757.1 1575896 1576438 D KEGG: mex:Mext_1325 hypothetical protein; hypothetical protein 1575896..1576438 Methylobacterium extorquens CM4 7115135 YP_002420320.1 CDS Mchl_1526 NC_011757.1 1576551 1577315 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1326 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1576551..1577315 Methylobacterium extorquens CM4 7115136 YP_002420321.1 CDS Mchl_1527 NC_011757.1 1577401 1577580 D KEGG: mrd:Mrad2831_4249 hypothetical protein; hypothetical protein 1577401..1577580 Methylobacterium extorquens CM4 7115137 YP_002420322.1 CDS Mchl_1528 NC_011757.1 1577638 1577880 D KEGG: mex:Mext_1327 hypothetical protein; hypothetical protein 1577638..1577880 Methylobacterium extorquens CM4 7115138 YP_002420323.1 CDS Mchl_1529 NC_011757.1 1577967 1578857 R PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: mex:Mext_1328 alpha/beta hydrolase domain-containing protein; alpha/beta hydrolase fold-3 domain-containing protein complement(1577967..1578857) Methylobacterium extorquens CM4 7115139 YP_002420324.1 CDS Mchl_1530 NC_011757.1 1579657 1583151 R KEGG: mex:Mext_1329 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase complement(1579657..1583151) Methylobacterium extorquens CM4 7115140 YP_002420325.1 CDS Mchl_1531 NC_011757.1 1583676 1585091 D PFAM: cytochrome P450; KEGG: mex:Mext_1330 cytochrome P450; cytochrome P450 1583676..1585091 Methylobacterium extorquens CM4 7115141 YP_002420326.1 CDS Mchl_1532 NC_011757.1 1585081 1587516 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: mex:Mext_1331 diguanylate cyclase; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1585081..1587516 Methylobacterium extorquens CM4 7115142 YP_002420327.1 CDS Mchl_1533 NC_011757.1 1587688 1588518 R PFAM: protein of unknown function DUF1194; KEGG: mex:Mext_1332 hypothetical protein; hypothetical protein complement(1587688..1588518) Methylobacterium extorquens CM4 7115143 YP_002420328.1 CDS Mchl_1534 NC_011757.1 1588531 1589511 R PFAM: ApbE family lipoprotein; KEGG: mex:Mext_1333 ApbE family lipoprotein; ApbE family lipoprotein complement(1588531..1589511) Methylobacterium extorquens CM4 7115144 YP_002420329.1 CDS Mchl_1535 NC_011757.1 1589516 1591630 R PFAM: FMN-binding domain protein; KEGG: mex:Mext_1334 FMN-binding domain-containing protein; FMN-binding domain-containing protein complement(1589516..1591630) Methylobacterium extorquens CM4 7115145 YP_002420330.1 CDS Mchl_1536 NC_011757.1 1591627 1592715 R TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mpo:Mpop_4869 40-residue YVTN family beta-propeller repeat protein; 40-residue YVTN family beta-propeller repeat-containing protein complement(1591627..1592715) Methylobacterium extorquens CM4 7115146 YP_002420331.1 CDS Mchl_1537 NC_011757.1 1592688 1593914 R KEGG: mex:Mext_1336 hypothetical protein; hypothetical protein complement(1592688..1593914) Methylobacterium extorquens CM4 7115147 YP_002420332.1 CDS Mchl_1538 NC_011757.1 1594076 1594498 D KEGG: mex:Mext_1337 cytochrome C550; cytochrome C550 1594076..1594498 Methylobacterium extorquens CM4 7115148 YP_002420333.1 CDS Mchl_1539 NC_011757.1 1594513 1595382 D PFAM: extracellular solute-binding protein family 3; KEGG: mex:Mext_1338 extracellular solute-binding protein; family 3 extracellular solute-binding protein 1594513..1595382 Methylobacterium extorquens CM4 7115149 YP_002420334.1 CDS Mchl_1540 NC_011757.1 1595682 1597445 D TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: pyrrolo-quinoline quinone; KEGG: mex:Mext_1339 methanol/ethanol family PQQ-dependent dehydrogenase; methanol/ethanol family PQQ-dependent dehydrogenase 1595682..1597445 Methylobacterium extorquens CM4 7115150 YP_002420335.1 CDS Mchl_1542 NC_011757.1 1597767 1599263 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1340 major facilitator transporter; major facilitator superfamily protein complement(1597767..1599263) Methylobacterium extorquens CM4 7115152 YP_002420336.1 CDS Mchl_1543 NC_011757.1 1599733 1599975 D KEGG: mex:Mext_1341 hypothetical protein; hypothetical protein 1599733..1599975 Methylobacterium extorquens CM4 7115153 YP_002420337.1 CDS Mchl_1544 NC_011757.1 1600030 1600710 R KEGG: mex:Mext_1342 hypothetical protein; hypothetical protein complement(1600030..1600710) Methylobacterium extorquens CM4 7115154 YP_002420338.1 CDS Mchl_1545 NC_011757.1 1600772 1600948 R KEGG: mex:Mext_1344 hypothetical protein; hypothetical protein complement(1600772..1600948) Methylobacterium extorquens CM4 7115155 YP_002420339.1 CDS Mchl_1546 NC_011757.1 1600945 1601445 R KEGG: mex:Mext_1345 hypothetical protein; hypothetical protein complement(1600945..1601445) Methylobacterium extorquens CM4 7115156 YP_002420340.1 CDS Mchl_1547 NC_011757.1 1601510 1602277 R KEGG: mex:Mext_1346 hypothetical protein; hypothetical protein complement(1601510..1602277) Methylobacterium extorquens CM4 7115157 YP_002420341.1 CDS Mchl_1548 NC_011757.1 1602340 1602666 D KEGG: mex:Mext_1347 hypothetical protein; hypothetical protein 1602340..1602666 Methylobacterium extorquens CM4 7115158 YP_002420342.1 CDS Mchl_1549 NC_011757.1 1602685 1603194 R KEGG: mex:Mext_1348 hypothetical protein; hypothetical protein complement(1602685..1603194) Methylobacterium extorquens CM4 7115159 YP_002420343.1 CDS Mchl_1550 NC_011757.1 1603191 1605308 R PFAM: peptidase M48 Ste24p; KEGG: mex:Mext_1349 peptidase M48 Ste24p; peptidase M48 Ste24p complement(1603191..1605308) Methylobacterium extorquens CM4 7115160 YP_002420344.1 CDS Mchl_1551 NC_011757.1 1606330 1606728 R PFAM: cupin; KEGG: mex:Mext_1351 cupin 2 domain-containing protein; cupin complement(1606330..1606728) Methylobacterium extorquens CM4 7115161 YP_002420345.1 CDS Mchl_1552 NC_011757.1 1606762 1607508 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1352 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1606762..1607508) Methylobacterium extorquens CM4 7115162 YP_002420346.1 CDS Mchl_1553 NC_011757.1 1607628 1608542 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1353 carbonate dehydratase; LysR family transcriptional regulator complement(1607628..1608542) Methylobacterium extorquens CM4 7115163 YP_002420347.1 CDS Mchl_1554 NC_011757.1 1608715 1609551 R PFAM: protein of unknown function DUF849; KEGG: mex:Mext_1354 hypothetical protein; hypothetical protein complement(1608715..1609551) Methylobacterium extorquens CM4 7115164 YP_002420348.1 CDS Mchl_1555 NC_011757.1 1609720 1610532 D PFAM: UspA domain protein; KEGG: mex:Mext_1355 UspA domain-containing protein; UspA domain-containing protein 1609720..1610532 Methylobacterium extorquens CM4 7115165 YP_002420349.1 CDS Mchl_1556 NC_011757.1 1610532 1610858 D PFAM: cytochrome C class I; KEGG: mex:Mext_1356 cytochrome c class I; cytochrome C class I 1610532..1610858 Methylobacterium extorquens CM4 7115166 YP_002420350.1 CDS Mchl_1557 NC_011757.1 1610934 1611686 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_1357 cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator complement(1610934..1611686) Methylobacterium extorquens CM4 7115167 YP_002420351.1 CDS Mchl_1558 NC_011757.1 1612081 1613706 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1358 ABC transporter; ABC transporter complement(1612081..1613706) Methylobacterium extorquens CM4 7115168 YP_002420352.1 CDS Mchl_1559 NC_011757.1 1613706 1615349 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1359 ABC transporter; ABC transporter complement(1613706..1615349) Methylobacterium extorquens CM4 7115169 YP_002420353.1 CDS Mchl_1560 NC_011757.1 1615449 1617038 D PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: mex:Mext_1360 cytochrome bd ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I 1615449..1617038 Methylobacterium extorquens CM4 7115170 YP_002420354.1 CDS Mchl_1561 NC_011757.1 1617100 1618254 D KEGG: mex:Mext_1361 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 1617100..1618254 Methylobacterium extorquens CM4 7115171 YP_002420355.1 CDS Mchl_1562 NC_011757.1 1618324 1618455 D TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: mex:Mext_1362 cyd operon protein YbgT; cyd operon protein YbgT 1618324..1618455 Methylobacterium extorquens CM4 7115172 YP_002420356.1 CDS Mchl_1563 NC_011757.1 1618492 1619244 R PFAM: regulatory protein DeoR; KEGG: mex:Mext_1363 regulatory protein DeoR; DeoR family transcriptional regulator complement(1618492..1619244) Methylobacterium extorquens CM4 7115173 YP_002420357.1 CDS Mchl_1564 NC_011757.1 1619395 1620978 R PFAM: amidase; KEGG: mex:Mext_1364 amidase; amidase complement(1619395..1620978) Methylobacterium extorquens CM4 7115174 YP_002420358.1 CDS Mchl_1565 NC_011757.1 1621497 1623923 D PFAM: response regulator receiver; KEGG: mex:Mext_1365 response regulator receiver; response regulator receiver protein 1621497..1623923 Methylobacterium extorquens CM4 7115175 YP_002420359.1 CDS Mchl_1566 NC_011757.1 1624056 1624868 D KEGG: mex:Mext_1366 hypothetical protein; hypothetical protein 1624056..1624868 Methylobacterium extorquens CM4 7115176 YP_002420360.1 CDS Mchl_1567 NC_011757.1 1625197 1627701 D KEGG: mex:Mext_1367 cellulose synthase catalytic subunit (UDP-forming); TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; cellulose synthase catalytic subunit 1625197..1627701 Methylobacterium extorquens CM4 7115177 YP_002420361.1 CDS Mchl_1568 NC_011757.1 1627698 1630340 D PFAM: cellulose synthase subunit B; KEGG: mex:Mext_1368 hypothetical protein; cellulose synthase subunit B 1627698..1630340 Methylobacterium extorquens CM4 7115178 YP_002420362.1 CDS Mchl_1569 NC_011757.1 1630340 1631629 D PFAM: glycoside hydrolase family 8; KEGG: mex:Mext_1369 cellulase; cellulase 1630340..1631629 Methylobacterium extorquens CM4 7115179 YP_002420363.1 CDS Mchl_1570 NC_011757.1 1631713 1633677 D KEGG: mex:Mext_1370 hypothetical protein; hypothetical protein 1631713..1633677 Methylobacterium extorquens CM4 7115180 YP_002420364.1 CDS Mchl_1571 NC_011757.1 1633674 1634687 D KEGG: mex:Mext_1371 hypothetical protein; hypothetical protein 1633674..1634687 Methylobacterium extorquens CM4 7115181 YP_002420365.1 CDS Mchl_1573 NC_011757.1 1642058 1642321 D KEGG: mpo:Mpop_4257 hypothetical protein; hypothetical protein 1642058..1642321 Methylobacterium extorquens CM4 7118762 YP_002420366.1 CDS Mchl_1574 NC_011757.1 1642414 1642650 D hypothetical protein 1642414..1642650 Methylobacterium extorquens CM4 7118763 YP_002420367.1 CDS Mchl_1575 NC_011757.1 1642729 1643310 R hypothetical protein complement(1642729..1643310) Methylobacterium extorquens CM4 7118764 YP_002420368.1 CDS Mchl_1576 NC_011757.1 1643307 1643606 R hypothetical protein complement(1643307..1643606) Methylobacterium extorquens CM4 7118765 YP_002420369.1 CDS Mchl_1577 NC_011757.1 1643621 1644049 R KEGG: pfo:Pfl01_5446 hypothetical protein; hypothetical protein complement(1643621..1644049) Methylobacterium extorquens CM4 7118766 YP_002420370.1 CDS Mchl_1578 NC_011757.1 1644064 1644627 R KEGG: mex:Mext_4382 hypothetical protein; hypothetical protein complement(1644064..1644627) Methylobacterium extorquens CM4 7118767 YP_002420371.1 CDS Mchl_1579 NC_011757.1 1644816 1645514 R PFAM: peptidoglycan-binding protein; KEGG: mex:Mext_4383 peptidoglycan binding domain-containing protein; peptidoglycan-binding protein complement(1644816..1645514) Methylobacterium extorquens CM4 7118768 YP_002420372.1 CDS Mchl_1580 NC_011757.1 1645999 1649217 R KEGG: nar:Saro_2740 PE-PGRS family protein; hypothetical protein complement(1645999..1649217) Methylobacterium extorquens CM4 7118769 YP_002420373.1 CDS Mchl_1581 NC_011757.1 1649333 1649605 R hypothetical protein complement(1649333..1649605) Methylobacterium extorquens CM4 7118770 YP_002420374.1 CDS Mchl_1582 NC_011757.1 1649602 1649913 R hypothetical protein complement(1649602..1649913) Methylobacterium extorquens CM4 7118771 YP_002420375.1 CDS Mchl_1583 NC_011757.1 1649925 1653914 R KEGG: mex:Mext_3534 hypothetical protein; hypothetical protein complement(1649925..1653914) Methylobacterium extorquens CM4 7118772 YP_002420376.1 CDS Mchl_1584 NC_011757.1 1654533 1654931 R KEGG: mex:Mext_3535 NLP/P60 protein; NLP/P60 protein complement(1654533..1654931) Methylobacterium extorquens CM4 7118773 YP_002420377.1 CDS Mchl_1585 NC_011757.1 1654928 1655476 R PFAM: Domain of unknown function DUF1833; KEGG: mag:amb0393 hypothetical protein; hypothetical protein complement(1654928..1655476) Methylobacterium extorquens CM4 7118774 YP_002420378.1 CDS Mchl_1586 NC_011757.1 1655481 1655858 R hypothetical protein complement(1655481..1655858) Methylobacterium extorquens CM4 7118775 YP_002420379.1 CDS Mchl_1587 NC_011757.1 1655862 1659719 R PFAM: lytic transglycosylase catalytic; KEGG: mpo:Mpop_5452 hypothetical protein; lytic transglycosylase complement(1655862..1659719) Methylobacterium extorquens CM4 7118776 YP_002420380.1 CDS Mchl_1588 NC_011757.1 1659726 1659986 R hypothetical protein complement(1659726..1659986) Methylobacterium extorquens CM4 7118777 YP_002420381.1 CDS Mchl_1589 NC_011757.1 1660061 1660486 R hypothetical protein complement(1660061..1660486) Methylobacterium extorquens CM4 7118778 YP_002420382.1 CDS Mchl_1590 NC_011757.1 1660483 1660677 R hypothetical protein complement(1660483..1660677) Methylobacterium extorquens CM4 7118779 YP_002420383.1 CDS Mchl_1591 NC_011757.1 1660674 1661606 R KEGG: mlo:mlr8533 hypothetical protein; hypothetical protein complement(1660674..1661606) Methylobacterium extorquens CM4 7118780 YP_002420384.1 CDS Mchl_1592 NC_011757.1 1661645 1662055 R KEGG: bra:BRADO3637 hypothetical protein; hypothetical protein complement(1661645..1662055) Methylobacterium extorquens CM4 7118781 YP_002420385.1 CDS Mchl_1593 NC_011757.1 1662057 1662740 R KEGG: bra:BRADO3636 hypothetical protein; hypothetical protein complement(1662057..1662740) Methylobacterium extorquens CM4 7118782 YP_002420386.1 CDS Mchl_1594 NC_011757.1 1662740 1663066 R KEGG: mlo:mlr8530 hypothetical protein; hypothetical protein complement(1662740..1663066) Methylobacterium extorquens CM4 7118783 YP_002420387.1 CDS Mchl_1595 NC_011757.1 1663063 1663743 R KEGG: mxa:MXAN_1217 hypothetical protein; hypothetical protein complement(1663063..1663743) Methylobacterium extorquens CM4 7118784 YP_002420388.1 CDS Mchl_1596 NC_011757.1 1663740 1663925 R hypothetical protein complement(1663740..1663925) Methylobacterium extorquens CM4 7118785 YP_002420389.1 CDS Mchl_1597 NC_011757.1 1664063 1664383 R hypothetical protein complement(1664063..1664383) Methylobacterium extorquens CM4 7118786 YP_002420390.1 CDS Mchl_1598 NC_011757.1 1664576 1665082 R hypothetical protein complement(1664576..1665082) Methylobacterium extorquens CM4 7118787 YP_002420391.1 CDS Mchl_1599 NC_011757.1 1665088 1665348 R KEGG: ppw:PputW619_1340 hypothetical protein; hypothetical protein complement(1665088..1665348) Methylobacterium extorquens CM4 7118788 YP_002420392.1 CDS Mchl_1600 NC_011757.1 1665412 1666713 R TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: bpm:BURPS1710b_1682 HK97 family phage major capsid protein; phage major capsid protein, HK97 family complement(1665412..1666713) Methylobacterium extorquens CM4 7118789 YP_002420393.1 CDS Mchl_1601 NC_011757.1 1666725 1667447 R TIGRFAM: phage prohead protease HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: nar:Saro_0648 prohead peptidase; phage prohead protease HK97 family complement(1666725..1667447) Methylobacterium extorquens CM4 7118790 YP_002420394.1 CDS Mchl_1602 NC_011757.1 1667450 1668754 R TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: bpm:BURPS1710b_1680 HK97 family phage portal protein; phage portal protein, HK97 family complement(1667450..1668754) Methylobacterium extorquens CM4 7118791 YP_002420395.1 CDS Mchl_1603 NC_011757.1 1668774 1670447 R PFAM: terminase; KEGG: oan:Oant_0238 phage terminase; terminase complement(1668774..1670447) Methylobacterium extorquens CM4 7118792 YP_002420396.1 CDS Mchl_1604 NC_011757.1 1670764 1671345 R PFAM: terminase small subunit; KEGG: bpt:Bpet0975 hypothetical protein; terminase small subunit complement(1670764..1671345) Methylobacterium extorquens CM4 7118793 YP_002420397.1 CDS Mchl_1605 NC_011757.1 1671548 1671916 D hypothetical protein 1671548..1671916 Methylobacterium extorquens CM4 7118794 YP_002420398.1 CDS Mchl_1606 NC_011757.1 1671911 1672237 R PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mex:Mext_0765 HNH endonuclease; HNH endonuclease complement(1671911..1672237) Methylobacterium extorquens CM4 7118795 YP_002420399.1 CDS Mchl_1607 NC_011757.1 1672344 1672985 D KEGG: aby:ABAYE2688 hypothetical protein; hypothetical protein 1672344..1672985 Methylobacterium extorquens CM4 7118796 YP_002420400.1 CDS Mchl_1608 NC_011757.1 1673413 1673646 D KEGG: mex:Mext_3541 hypothetical protein; hypothetical protein 1673413..1673646 Methylobacterium extorquens CM4 7118797 YP_002420401.1 CDS Mchl_1609 NC_011757.1 1673827 1674543 R hypothetical protein complement(1673827..1674543) Methylobacterium extorquens CM4 7118798 YP_002420402.1 CDS Mchl_1610 NC_011757.1 1674666 1675103 R PFAM: ROSMUCR transcriptional regulator; KEGG: mpo:Mpop_2952 MucR family transcriptional regulator; MucR family transcriptional regulator complement(1674666..1675103) Methylobacterium extorquens CM4 7118799 YP_002420403.1 CDS Mchl_1611 NC_011757.1 1675151 1675420 R KEGG: bxe:Bxe_A3081 hypothetical protein; hypothetical protein complement(1675151..1675420) Methylobacterium extorquens CM4 7118800 YP_002420404.1 CDS Mchl_1612 NC_011757.1 1675417 1675626 R hypothetical protein complement(1675417..1675626) Methylobacterium extorquens CM4 7118801 YP_002420405.1 CDS Mchl_1613 NC_011757.1 1675626 1675976 R hypothetical protein complement(1675626..1675976) Methylobacterium extorquens CM4 7118802 YP_002420406.1 CDS Mchl_1614 NC_011757.1 1675973 1676746 R KEGG: mpo:Mpop_1343 hypothetical protein; hypothetical protein complement(1675973..1676746) Methylobacterium extorquens CM4 7118803 YP_002420407.1 CDS Mchl_1615 NC_011757.1 1676804 1677562 R KEGG: mex:Mext_2440 hypothetical protein; hypothetical protein complement(1676804..1677562) Methylobacterium extorquens CM4 7118804 YP_002420408.1 CDS Mchl_1616 NC_011757.1 1678232 1678858 R PFAM: MT-A70 family protein; KEGG: ajs:Ajs_0426 MT-A70 family protein; MT-A70 family protein complement(1678232..1678858) Methylobacterium extorquens CM4 7118805 YP_002420409.1 CDS Mchl_1617 NC_011757.1 1678837 1679049 R KEGG: met:M446_4099 hypothetical protein; hypothetical protein complement(1678837..1679049) Methylobacterium extorquens CM4 7118806 YP_002420410.1 CDS Mchl_1618 NC_011757.1 1679042 1679245 R hypothetical protein complement(1679042..1679245) Methylobacterium extorquens CM4 7118807 YP_002420411.1 CDS Mchl_1619 NC_011757.1 1679242 1679799 R PFAM: endodeoxyribonuclease RusA; KEGG: mex:Mext_2442 hypothetical protein; endodeoxyribonuclease RusA complement(1679242..1679799) Methylobacterium extorquens CM4 7118808 YP_002420412.1 CDS Mchl_1620 NC_011757.1 1679805 1680074 R KEGG: mpo:Mpop_2872 hypothetical protein; hypothetical protein complement(1679805..1680074) Methylobacterium extorquens CM4 7118809 YP_002420413.1 CDS Mchl_1621 NC_011757.1 1680187 1680609 R KEGG: mrd:Mrad2831_5725 hypothetical protein; hypothetical protein complement(1680187..1680609) Methylobacterium extorquens CM4 7118810 YP_002420414.1 CDS Mchl_1622 NC_011757.1 1680885 1681133 D hypothetical protein 1680885..1681133 Methylobacterium extorquens CM4 7118811 YP_002420415.1 CDS Mchl_1623 NC_011757.1 1681234 1681722 R hypothetical protein complement(1681234..1681722) Methylobacterium extorquens CM4 7118812 YP_002420416.1 CDS Mchl_1624 NC_011757.1 1681719 1681871 R hypothetical protein complement(1681719..1681871) Methylobacterium extorquens CM4 7118813 YP_002420417.1 CDS Mchl_1625 NC_011757.1 1681868 1682101 R KEGG: bja:bll5480 chaperone; chaperone complement(1681868..1682101) Methylobacterium extorquens CM4 7118814 YP_002420418.1 CDS Mchl_1626 NC_011757.1 1682198 1682932 D PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: atc:AGR_C_784 hypothetical protein; phage repressor 1682198..1682932 Methylobacterium extorquens CM4 7118815 YP_002420419.1 CDS Mchl_1627 NC_011757.1 1682934 1683242 D hypothetical protein 1682934..1683242 Methylobacterium extorquens CM4 7118816 YP_002420420.1 CDS Mchl_1628 NC_011757.1 1683708 1683965 R KEGG: mrd:Mrad2831_5731 hypothetical protein; hypothetical protein complement(1683708..1683965) Methylobacterium extorquens CM4 7118817 YP_002420421.1 CDS Mchl_1629 NC_011757.1 1684411 1684872 D KEGG: mex:Mext_1589 hypothetical protein; hypothetical protein 1684411..1684872 Methylobacterium extorquens CM4 7118818 YP_002420422.1 CDS Mchl_1630 NC_011757.1 1684937 1685443 D hypothetical protein 1684937..1685443 Methylobacterium extorquens CM4 7118819 YP_002420423.1 CDS Mchl_1631 NC_011757.1 1685450 1685731 D hypothetical protein 1685450..1685731 Methylobacterium extorquens CM4 7118820 YP_002420424.1 CDS Mchl_1632 NC_011757.1 1685731 1686021 D hypothetical protein 1685731..1686021 Methylobacterium extorquens CM4 7118821 YP_002420425.1 CDS Mchl_1633 NC_011757.1 1686018 1686227 D hypothetical protein 1686018..1686227 Methylobacterium extorquens CM4 7118822 YP_002420426.1 CDS Mchl_1634 NC_011757.1 1686224 1686655 D KEGG: mrd:Mrad2831_1232 HNH nuclease; hypothetical protein 1686224..1686655 Methylobacterium extorquens CM4 7118823 YP_002420427.1 CDS Mchl_1635 NC_011757.1 1686659 1687009 D PFAM: helix-turn-helix domain protein; KEGG: nfa:nfa22390 transcriptional regulator; XRE family transcriptional regulator 1686659..1687009 Methylobacterium extorquens CM4 7118824 YP_002420428.1 CDS Mchl_1636 NC_011757.1 1687003 1687398 D hypothetical protein 1687003..1687398 Methylobacterium extorquens CM4 7118825 YP_002420429.1 CDS Mchl_1637 NC_011757.1 1688402 1688716 D KEGG: rxy:Rxyl_0105 quinolinate synthetase; hypothetical protein 1688402..1688716 Methylobacterium extorquens CM4 7118826 YP_002420430.1 CDS Mchl_1638 NC_011757.1 1688713 1689237 D KEGG: dac:Daci_3228 hypothetical protein; hypothetical protein 1688713..1689237 Methylobacterium extorquens CM4 7118827 YP_002420431.1 CDS Mchl_1639 NC_011757.1 1689234 1690466 D hypothetical protein 1689234..1690466 Methylobacterium extorquens CM4 7118828 YP_002420432.1 CDS Mchl_1640 NC_011757.1 1690468 1690716 D hypothetical protein 1690468..1690716 Methylobacterium extorquens CM4 7118829 YP_002420433.1 CDS Mchl_1641 NC_011757.1 1690713 1691324 D KEGG: mucin-associated surface protein (MASP); hypothetical protein 1690713..1691324 Methylobacterium extorquens CM4 7118830 YP_002420434.1 CDS Mchl_1642 NC_011757.1 1691325 1691660 D hypothetical protein 1691325..1691660 Methylobacterium extorquens CM4 7118831 YP_002420435.1 CDS Mchl_1643 NC_011757.1 1691653 1692015 D KEGG: hypothetical protein; hypothetical protein 1691653..1692015 Methylobacterium extorquens CM4 7118832 YP_002420436.1 CDS Mchl_1644 NC_011757.1 1692008 1692283 D hypothetical protein 1692008..1692283 Methylobacterium extorquens CM4 7118833 YP_002420437.1 CDS Mchl_1645 NC_011757.1 1692280 1692621 D KEGG: bja:bll8082 hypothetical protein; hypothetical protein 1692280..1692621 Methylobacterium extorquens CM4 7118834 YP_002420438.1 CDS Mchl_1646 NC_011757.1 1692687 1693679 D PFAM: integrase family protein; KEGG: mrd:Mrad2831_4162 integrase family protein; integrase family protein 1692687..1693679 Methylobacterium extorquens CM4 7118835 YP_002420439.1 CDS Mchl_1648 NC_011757.1 1694938 1695207 D hypothetical protein 1694938..1695207 Methylobacterium extorquens CM4 7118837 YP_002420440.1 CDS Mchl_1649 NC_011757.1 1695539 1696309 R KEGG: mex:Mext_1375 hypothetical protein; transmembrane anti-sigma factor complement(1695539..1696309) Methylobacterium extorquens CM4 7118838 YP_002420441.1 CDS Mchl_1650 NC_011757.1 1696395 1696958 R Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; RNA polymerase sigma factor complement(1696395..1696958) Methylobacterium extorquens CM4 7116794 YP_002420442.1 CDS Mchl_1651 NC_011757.1 1697196 1698500 R PFAM: peptidoglycan-binding protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_1377 peptidoglycan binding domain-containing protein; ErfK/YbiS/YcfS/YnhG family protein complement(1697196..1698500) Methylobacterium extorquens CM4 7116796 YP_002420443.1 CDS Mchl_1652 NC_011757.1 1698785 1699198 D KEGG: mpo:Mpop_1372 hypothetical protein; hypothetical protein 1698785..1699198 Methylobacterium extorquens CM4 7116797 YP_002420444.1 CDS Mchl_1653 NC_011757.1 1699248 1700321 D PFAM: protein of unknown function DUF461; nuclear export factor GLE1; KEGG: mex:Mext_1378 hypothetical protein; hypothetical protein 1699248..1700321 Methylobacterium extorquens CM4 7116798 YP_002420445.1 CDS Mchl_1654 NC_011757.1 1700437 1700961 D PFAM: protein of unknown function DUF461; KEGG: mex:Mext_1379 hypothetical protein; hypothetical protein 1700437..1700961 Methylobacterium extorquens CM4 7116799 YP_002420446.1 CDS Mchl_1655 NC_011757.1 1700951 1701598 D PFAM: electron transporter SCO1/SenC; KEGG: mex:Mext_1380 electron transporter SCO1/SenC; electron transporter SCO1/SenC 1700951..1701598 Methylobacterium extorquens CM4 7116800 YP_002420447.1 CDS Mchl_1656 NC_011757.1 1701741 1702097 D KEGG: mex:Mext_1381 hypothetical protein; hypothetical protein 1701741..1702097 Methylobacterium extorquens CM4 7116801 YP_002420448.1 CDS Mchl_1657 NC_011757.1 1702140 1704287 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1382 TonB-dependent receptor; TonB-dependent receptor 1702140..1704287 Methylobacterium extorquens CM4 7116802 YP_002420449.1 CDS Mchl_1658 NC_011757.1 1704532 1706379 D PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: mex:Mext_1383 peptidase C14 caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 1704532..1706379 Methylobacterium extorquens CM4 7116803 YP_002420450.1 CDS Mchl_1659 NC_011757.1 1706530 1708002 R PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_1384 carbohydrate-selective porin OprB; carbohydrate-selective porin OprB complement(1706530..1708002) Methylobacterium extorquens CM4 7116804 YP_002420451.1 CDS Mchl_1660 NC_011757.1 1708107 1708778 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_1385 GntR domain-containing protein; GntR family transcriptional regulator complement(1708107..1708778) Methylobacterium extorquens CM4 7116805 YP_002420452.1 CDS Mchl_1661 NC_011757.1 1708942 1709964 D PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: mex:Mext_1386 TRAP dicarboxylate transporter-DctP subunit; TRAP dicarboxylate transporter subunit DctP 1708942..1709964 Methylobacterium extorquens CM4 7116806 YP_002420453.1 CDS Mchl_1662 NC_011757.1 1709961 1710686 D PFAM: tripartite ATP-independent periplasmic transporter DctQ component; KEGG: mex:Mext_1387 tripartite ATP-independent periplasmic transporter DctQ; tripartite ATP-independent periplasmic transporter DctQ component 1709961..1710686 Methylobacterium extorquens CM4 7116807 YP_002420454.1 CDS Mchl_1663 NC_011757.1 1710683 1712035 D TIGRFAM: TRAP dicarboxylate transporter DctM subunit; PFAM: TRAP C4-dicarboxylate transporter permease DctM subunit; KEGG: mex:Mext_1388 TRAP dicarboxylate transporter DctM subunit; TRAP dicarboxylate transporter subunit DctM 1710683..1712035 Methylobacterium extorquens CM4 7116808 YP_002420455.1 CDS Mchl_1664 NC_011757.1 1712203 1712400 D KEGG: mex:Mext_1389 hypothetical protein; hypothetical protein 1712203..1712400 Methylobacterium extorquens CM4 7116809 YP_002420456.1 CDS Mchl_1665 NC_011757.1 1713193 1713426 D KEGG: mex:Mext_1390 hypothetical protein; hypothetical protein 1713193..1713426 Methylobacterium extorquens CM4 7116810 YP_002420457.1 CDS Mchl_1666 NC_011757.1 1713494 1714540 D PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mex:Mext_1391 pyridoxal-5'-phosphate-dependent protein beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta 1713494..1714540 Methylobacterium extorquens CM4 7116811 YP_002420458.1 CDS Mchl_1667 NC_011757.1 1714653 1714808 D KEGG: mex:Mext_1392 hypothetical protein; hypothetical protein 1714653..1714808 Methylobacterium extorquens CM4 7116812 YP_002420459.1 CDS Mchl_1668 NC_011757.1 1714824 1716326 R PFAM: peptidoglycan-binding protein; KEGG: mex:Mext_1393 peptidoglycan binding domain-containing protein; peptidoglycan-binding protein complement(1714824..1716326) Methylobacterium extorquens CM4 7116813 YP_002420460.1 CDS Mchl_1669 NC_011757.1 1716404 1716940 D PFAM: protein of unknown function DUF606; KEGG: mex:Mext_1394 hypothetical protein; hypothetical protein 1716404..1716940 Methylobacterium extorquens CM4 7116814 YP_002420461.1 CDS Mchl_1670 NC_011757.1 1717053 1722371 D PFAM: alpha-2-macroglobulin; alpha-2-macroglobulin 2; KEGG: mex:Mext_1395 alpha-2-macroglobulin domain-containing protein; alpha-2-macroglobulin 1717053..1722371 Methylobacterium extorquens CM4 7116815 YP_002420462.1 CDS Mchl_1671 NC_011757.1 1722376 1724577 D TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: mex:Mext_1396 penicillin-binding protein 1C; penicillin-binding protein 1C 1722376..1724577 Methylobacterium extorquens CM4 7116816 YP_002420463.1 CDS Mchl_1672 NC_011757.1 1724715 1725035 D PFAM: small multidrug resistance protein; KEGG: mex:Mext_1397 small multidrug resistance protein; small multidrug resistance protein 1724715..1725035 Methylobacterium extorquens CM4 7116817 YP_002420464.1 CDS Mchl_1673 NC_011757.1 1725040 1725840 R PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_1398 helix-turn-helix domain-containing protein; helix-turn-helix domain-containing protein complement(1725040..1725840) Methylobacterium extorquens CM4 7116818 YP_002420465.1 CDS Mchl_1674 NC_011757.1 1725892 1726515 R TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: mex:Mext_1399 sortase family protein; sortase family protein complement(1725892..1726515) Methylobacterium extorquens CM4 7116819 YP_002420466.1 CDS Mchl_1675 NC_011757.1 1726512 1728728 R PFAM: von Willebrand factor type A; Vault protein inter-alpha-trypsin domain protein; SMART: Vault protein inter-alpha-trypsin, metazoa; KEGG: mex:Mext_1400 vault protein inter-alpha-trypsin subunit; Vault protein inter-alpha-trypsin domain-containing protein complement(1726512..1728728) Methylobacterium extorquens CM4 7116820 YP_002420467.1 CDS Mchl_1676 NC_011757.1 1728973 1729584 D PFAM: phosphoglycerate mutase; KEGG: mex:Mext_1401 phosphoglycerate mutase; phosphoglycerate mutase 1728973..1729584 Methylobacterium extorquens CM4 7116821 YP_002420468.1 CDS Mchl_1677 NC_011757.1 1729672 1730484 R KEGG: mex:Mext_1402 hypothetical protein; hypothetical protein complement(1729672..1730484) Methylobacterium extorquens CM4 7116822 YP_002420469.1 CDS Mchl_1678 NC_011757.1 1730523 1731536 R PFAM: high-affinity nickel-transporter; KEGG: mex:Mext_1403 high-affinity nickel-transporter; high-affinity nickel-transporter complement(1730523..1731536) Methylobacterium extorquens CM4 7116823 YP_002420470.1 CDS Mchl_1679 NC_011757.1 1731527 1732204 R PFAM: protein of unknown function DUF1007; KEGG: mex:Mext_1404 hypothetical protein; hypothetical protein complement(1731527..1732204) Methylobacterium extorquens CM4 7116824 YP_002420471.1 CDS Mchl_1680 NC_011757.1 1732319 1732780 R PFAM: cytochrome C biogenesis protein; KEGG: mex:Mext_1405 cytochrome C biogenesis protein; cytochrome C biogenesis protein complement(1732319..1732780) Methylobacterium extorquens CM4 7116825 YP_002420472.1 CDS Mchl_1681 NC_011757.1 1732777 1734777 R PFAM: cytochrome C assembly protein; KEGG: mex:Mext_1406 cytochrome C assembly protein; cytochrome C assembly protein complement(1732777..1734777) Methylobacterium extorquens CM4 7116826 YP_002420473.1 CDS Mchl_1682 NC_011757.1 1734824 1735345 R PFAM: CcmE/CycJ protein; KEGG: mex:Mext_1407 CcmE/CycJ protein; CcmE/CycJ protein complement(1734824..1735345) Methylobacterium extorquens CM4 7116827 YP_002420474.1 CDS Mchl_1683 NC_011757.1 1735508 1737079 R TIGRFAM: cytochrome C biogenesis protein CcmI; KEGG: mex:Mext_1408 cytochrome C biogenesis protein CcmI; cytochrome C biogenesis protein CcmI complement(1735508..1737079) Methylobacterium extorquens CM4 7116828 YP_002420475.1 CDS Mchl_1684 NC_011757.1 1737226 1738641 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: mex:Mext_1409 ATPase domain-containing protein; histidine kinase complement(1737226..1738641) Methylobacterium extorquens CM4 7116829 YP_002420476.1 CDS Mchl_1685 NC_011757.1 1739028 1739705 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_1411 response regulator receiver; transcriptional regulator complement(1739028..1739705) Methylobacterium extorquens CM4 7116830 YP_002420477.1 CDS Mchl_1686 NC_011757.1 1739744 1740283 R KEGG: mex:Mext_1412 hypothetical protein; hypothetical protein complement(1739744..1740283) Methylobacterium extorquens CM4 7116831 YP_002420478.1 CDS Mchl_1687 NC_011757.1 1740297 1740545 R KEGG: mex:Mext_1413 hypothetical protein; hypothetical protein complement(1740297..1740545) Methylobacterium extorquens CM4 7116832 YP_002420479.1 CDS Mchl_1688 NC_011757.1 1740568 1740921 R KEGG: mex:Mext_1414 hypothetical protein; hypothetical protein complement(1740568..1740921) Methylobacterium extorquens CM4 7116833 YP_002420480.1 CDS Mchl_1689 NC_011757.1 1740971 1741573 R KEGG: mex:Mext_1415 hypothetical protein; hypothetical protein complement(1740971..1741573) Methylobacterium extorquens CM4 7116834 YP_002420481.1 CDS Mchl_1690 NC_011757.1 1741607 1742170 R PFAM: glycoside hydrolase family 24; KEGG: mex:Mext_1416 glycoside hydrolase family protein; glycoside hydrolase family protein complement(1741607..1742170) Methylobacterium extorquens CM4 7116835 YP_002420482.1 CDS Mchl_1691 NC_011757.1 1742289 1743371 R KEGG: mex:Mext_1417 hypothetical protein; hypothetical protein complement(1742289..1743371) Methylobacterium extorquens CM4 7116836 YP_002420483.1 CDS Mchl_1692 NC_011757.1 1743396 1747304 R KEGG: mex:Mext_1418 gene transfer agent (GTA) orfg15, like protein; gene transfer agent (GTA) orfg15,-like protein complement(1743396..1747304) Methylobacterium extorquens CM4 7116837 YP_002420484.1 CDS Mchl_1693 NC_011757.1 1747344 1747808 R TIGRFAM: phage cell wall peptidase, NlpC/P60 family; KEGG: mex:Mext_1419 NlpC/P60 family phage cell wall peptidase; phage cell wall peptidase, NlpC/P60 family complement(1747344..1747808) Methylobacterium extorquens CM4 7116838 YP_002420485.1 CDS Mchl_1694 NC_011757.1 1747816 1748709 R PFAM: conserved hypothetical protein; KEGG: mex:Mext_1420 hypothetical protein; hypothetical protein complement(1747816..1748709) Methylobacterium extorquens CM4 7116839 YP_002420486.1 CDS Mchl_1695 NC_011757.1 1748720 1749361 R PFAM: conserved hypothetical protein; KEGG: mex:Mext_1421 hypothetical protein; hypothetical protein complement(1748720..1749361) Methylobacterium extorquens CM4 7116840 YP_002420487.1 CDS Mchl_1696 NC_011757.1 1749373 1749999 R KEGG: mex:Mext_1422 gene transfer agent (GTA) orfg11; gene transfer agent (GTA) orfg11 complement(1749373..1749999) Methylobacterium extorquens CM4 7116841 YP_002420488.1 CDS Mchl_1697 NC_011757.1 1749999 1750229 R KEGG: mex:Mext_1423 hypothetical protein; hypothetical protein complement(1749999..1750229) Methylobacterium extorquens CM4 7116842 YP_002420489.1 CDS Mchl_1698 NC_011757.1 1750226 1750558 R KEGG: mex:Mext_1424 gene transfer agent (GTA) orfg10; gene transfer agent (GTA) orfg10 complement(1750226..1750558) Methylobacterium extorquens CM4 7116843 YP_002420490.1 CDS Mchl_1699 NC_011757.1 1750555 1750965 R TIGRFAM: phage major tail protein, TP901-1 family; PFAM: major tail protein TP901-1; KEGG: mex:Mext_1425 TP901-1 family phage major tail protein; phage major tail protein, TP901-1 family complement(1750555..1750965) Methylobacterium extorquens CM4 7116844 YP_002420491.1 CDS Mchl_1700 NC_011757.1 1750995 1751411 R KEGG: mex:Mext_1426 hypothetical protein; hypothetical protein complement(1750995..1751411) Methylobacterium extorquens CM4 7116845 YP_002420492.1 CDS Mchl_1701 NC_011757.1 1751411 1751752 R TIGRFAM: phage head-tail adaptor; PFAM: head-tail adaptor protein; KEGG: mex:Mext_1427 phage head-tail adaptor; phage head-tail adaptor complement(1751411..1751752) Methylobacterium extorquens CM4 7116846 YP_002420493.1 CDS Mchl_1702 NC_011757.1 1751775 1752350 R KEGG: mex:Mext_1428 phiE125 gp8 family protein; phiE125 gp8 family protein complement(1751775..1752350) Methylobacterium extorquens CM4 7116847 YP_002420494.1 CDS Mchl_1703 NC_011757.1 1752384 1753139 D PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: mex:Mext_1429 peptidase S1 and S6 chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap 1752384..1753139 Methylobacterium extorquens CM4 7116848 YP_002420495.1 CDS Mchl_1704 NC_011757.1 1753287 1754135 D PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: mex:Mext_1430 peptidase S1 and S6 chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap 1753287..1754135 Methylobacterium extorquens CM4 7116849 YP_002420496.1 CDS Mchl_1705 NC_011757.1 1754142 1755407 R TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: mex:Mext_1431 HK97 family phage major capsid protein; phage major capsid protein, HK97 family complement(1754142..1755407) Methylobacterium extorquens CM4 7116850 YP_002420497.1 CDS Mchl_1706 NC_011757.1 1755440 1755910 R TIGRFAM: phage prohead protease HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: mex:Mext_1432 HK97 family phage prohead protease; phage prohead protease HK97 family complement(1755440..1755910) Methylobacterium extorquens CM4 7116851 YP_002420498.1 CDS Mchl_1707 NC_011757.1 1755968 1757140 R TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: mex:Mext_1433 HK97 family phage portal protein; phage portal protein, HK97 family complement(1755968..1757140) Methylobacterium extorquens CM4 7116852 YP_002420499.1 CDS Mchl_1708 NC_011757.1 1757187 1758452 R PFAM: protein of unknown function DUF264; KEGG: mex:Mext_1434 hypothetical protein; hypothetical protein complement(1757187..1758452) Methylobacterium extorquens CM4 7116853 YP_002420500.1 CDS Mchl_1709 NC_011757.1 1758415 1758843 R KEGG: mpo:Mpop_1431 hypothetical protein; hypothetical protein complement(1758415..1758843) Methylobacterium extorquens CM4 7116854 YP_002420501.1 CDS Mchl_1710 NC_011757.1 1759269 1760030 R TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_1435 precorrin-3B C17-methyltransferase; precorrin-3B C17-methyltransferase complement(1759269..1760030) Methylobacterium extorquens CM4 7116855 YP_002420502.1 CDS Mchl_1711 NC_011757.1 1760027 1760824 R TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_1436 precorrin-2 C20-methyltransferase; precorrin-2 C20-methyltransferase complement(1760027..1760824) Methylobacterium extorquens CM4 7116856 YP_002420503.1 CDS Mchl_1712 NC_011757.1 1760824 1761456 R PFAM: precorrin-8X methylmutase CbiC/CobH; KEGG: mex:Mext_1437 precorrin-8X methylmutase; precorrin-8X methylmutase complement(1760824..1761456) Methylobacterium extorquens CM4 7116857 YP_002420504.1 CDS Mchl_1713 NC_011757.1 1761463 1762749 R TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: mex:Mext_1438 precorrin-3B synthase; precorrin-3B synthase complement(1761463..1762749) Methylobacterium extorquens CM4 7116858 YP_002420505.1 CDS cobN NC_011757.1 1762746 1766177 R with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN complement(1762746..1766177) Methylobacterium extorquens CM4 7116859 YP_002420506.1 CDS Mchl_1715 NC_011757.1 1766191 1767087 R KEGG: mex:Mext_1440 hypothetical protein; hypothetical protein complement(1766191..1767087) Methylobacterium extorquens CM4 7116860 YP_002420507.1 CDS Mchl_1716 NC_011757.1 1767084 1768118 R TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_1441 cobalamin biosynthesis protein CobW; cobalamin biosynthesis protein CobW complement(1767084..1768118) Methylobacterium extorquens CM4 7116861 YP_002420508.1 CDS Mchl_1717 NC_011757.1 1768115 1768579 R PFAM: protein of unknown function DUF1636; KEGG: mex:Mext_1442 hypothetical protein; hypothetical protein complement(1768115..1768579) Methylobacterium extorquens CM4 7116862 YP_002420509.1 CDS Mchl_1718 NC_011757.1 1768566 1769333 R TIGRFAM: cobalt transporter subunit CbtA; PFAM: Cobalt transporter subunit CbtA KEGG: mex:Mext_1443 cobalt transporter subunit CbtA; cobalt transporter subunit CbtA complement(1768566..1769333) Methylobacterium extorquens CM4 7116863 YP_002420510.1 CDS Mchl_1719 NC_011757.1 1769364 1769546 R TIGRFAM: cobalt transporter subunit CbtB; PFAM: Cobalt transporter subunit CbtB KEGG: mex:Mext_1444 cobalt transporter subunit CbtB; cobalt transporter subunit CbtB complement(1769364..1769546) Methylobacterium extorquens CM4 7116864 YP_002420511.1 CDS Mchl_1720 NC_011757.1 1769831 1770253 R KEGG: mex:Mext_1445 hypothetical protein; hypothetical protein complement(1769831..1770253) Methylobacterium extorquens CM4 7116865 YP_002420512.1 CDS Mchl_1721 NC_011757.1 1770240 1770731 R PFAM: regulatory protein MarR; KEGG: mex:Mext_1446 regulatory protein MarR; MarR family transcriptional regulator complement(1770240..1770731) Methylobacterium extorquens CM4 7116866 YP_002420513.1 CDS Mchl_1722 NC_011757.1 1770813 1771343 D PFAM: cobalbumin biosynthesis protein; KEGG: mex:Mext_1447 adenosylcobinamide-phosphate guanylyltransferase; adenosylcobinamide-phosphate guanylyltransferase 1770813..1771343 Methylobacterium extorquens CM4 7116867 YP_002420514.1 CDS Mchl_1723 NC_011757.1 1771343 1771945 D KEGG: mex:Mext_1448 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 1771343..1771945 Methylobacterium extorquens CM4 7116868 YP_002420515.1 CDS fumC NC_011757.1 1772512 1774053 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1772512..1774053 Methylobacterium extorquens CM4 7116869 YP_002420516.1 CDS Mchl_1725 NC_011757.1 1774168 1774707 R TIGRFAM: formaldehyde-activating enzyme; PFAM: formaldehyde-activating enzyme (Fae); KEGG: mex:Mext_1450 formaldehyde-activating enzyme; formaldehyde-activating enzyme complement(1774168..1774707) Methylobacterium extorquens CM4 7116870 YP_002420517.1 CDS Mchl_1726 NC_011757.1 1774888 1775169 D KEGG: mex:Mext_1451 hypothetical protein; hypothetical protein 1774888..1775169 Methylobacterium extorquens CM4 7116871 YP_002420518.1 CDS Mchl_1727 NC_011757.1 1775193 1775639 R KEGG: mex:Mext_1452 hypothetical protein; hypothetical protein complement(1775193..1775639) Methylobacterium extorquens CM4 7116872 YP_002420519.1 CDS Mchl_1728 NC_011757.1 1775860 1776744 D PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_1453 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1775860..1776744 Methylobacterium extorquens CM4 7116873 YP_002420520.1 CDS Mchl_1729 NC_011757.1 1777040 1779121 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_1454 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1777040..1779121 Methylobacterium extorquens CM4 7116874 YP_002420521.1 CDS Mchl_1730 NC_011757.1 1779156 1782467 R KEGG: mex:Mext_1455 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase complement(1779156..1782467) Methylobacterium extorquens CM4 7116875 YP_002420522.1 CDS Mchl_1731 NC_011757.1 1782590 1783492 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: psp:PSPPH_1098 hypothetical protein; hypothetical protein complement(1782590..1783492) Methylobacterium extorquens CM4 7116876 YP_002420523.1 CDS Mchl_1732 NC_011757.1 1783663 1784529 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cti:RALTA_B2299 transcription regulator, AraC family; AraC family transcriptional regulator 1783663..1784529 Methylobacterium extorquens CM4 7114364 YP_002420524.1 CDS Mchl_1733 NC_011757.1 1784585 1786675 R PFAM: protein of unknown function DUF1355; KEGG: mex:Mext_1456 hypothetical protein; hypothetical protein complement(1784585..1786675) Methylobacterium extorquens CM4 7114528 YP_002420525.1 CDS Mchl_1734 NC_011757.1 1786866 1789703 R TIGRFAM: conserved hypothetical protein; KEGG: mex:Mext_1457 hypothetical protein; hypothetical protein complement(1786866..1789703) Methylobacterium extorquens CM4 7114529 YP_002420526.1 CDS Mchl_1735 NC_011757.1 1789717 1790631 R PFAM: protein of unknown function DUF58; KEGG: mex:Mext_1458 hypothetical protein; hypothetical protein complement(1789717..1790631) Methylobacterium extorquens CM4 7114530 YP_002420527.1 CDS Mchl_1736 NC_011757.1 1790643 1791653 R PFAM: ATPase associated with various cellular activities AAA_3; ATPase AAA; KEGG: mex:Mext_1459 ATPase; ATPase AAA complement(1790643..1791653) Methylobacterium extorquens CM4 7114531 YP_002420528.1 CDS Mchl_1737 NC_011757.1 1791850 1792284 D PFAM: thioesterase superfamily protein; KEGG: mex:Mext_1460 thioesterase superfamily protein; thioesterase 1791850..1792284 Methylobacterium extorquens CM4 7114532 YP_002420529.1 CDS Mchl_1738 NC_011757.1 1792281 1792862 D PFAM: protein of unknown function DUF1285; KEGG: mex:Mext_1461 hypothetical protein; hypothetical protein 1792281..1792862 Methylobacterium extorquens CM4 7114533 YP_002420530.1 CDS Mchl_1739 NC_011757.1 1792859 1793542 D PFAM: NUDIX hydrolase; KEGG: mex:Mext_1462 NUDIX hydrolase; NUDIX hydrolase 1792859..1793542 Methylobacterium extorquens CM4 7114534 YP_002420531.1 CDS Mchl_1740 NC_011757.1 1793611 1793868 D KEGG: mex:Mext_1463 hypothetical protein; hypothetical protein 1793611..1793868 Methylobacterium extorquens CM4 7114535 YP_002420532.1 CDS Mchl_1741 NC_011757.1 1793865 1795151 D PFAM: polynucleotide adenylyltransferase region; KEGG: mex:Mext_1464 polynucleotide adenylyltransferase region; polynucleotide adenylyltransferase region 1793865..1795151 Methylobacterium extorquens CM4 7114536 YP_002420533.1 CDS atpC NC_011757.1 1795249 1795650 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(1795249..1795650) Methylobacterium extorquens CM4 7114537 YP_002420534.1 CDS Mchl_1743 NC_011757.1 1795677 1795928 R KEGG: mpo:Mpop_1464 hypothetical protein; hypothetical protein complement(1795677..1795928) Methylobacterium extorquens CM4 7114538 YP_002420535.1 CDS Mchl_1744 NC_011757.1 1795950 1797407 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(1795950..1797407) Methylobacterium extorquens CM4 7114539 YP_002420536.1 CDS Mchl_1745 NC_011757.1 1797432 1798322 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(1797432..1798322) Methylobacterium extorquens CM4 7114540 YP_002420537.1 CDS Mchl_1746 NC_011757.1 1798490 1800019 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(1798490..1800019) Methylobacterium extorquens CM4 7114541 YP_002420538.1 CDS Mchl_1747 NC_011757.1 1800094 1800663 R TIGRFAM: ATP synthase F1 subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: mpo:Mpop_1468 ATP synthase F1 subunit delta; ATP synthase F1 subunit delta complement(1800094..1800663) Methylobacterium extorquens CM4 7114542 YP_002420539.1 CDS Mchl_1748 NC_011757.1 1800932 1802002 R PFAM: ferrochelatase; KEGG: mex:Mext_1470 ferrochelatase; ferrochelatase complement(1800932..1802002) Methylobacterium extorquens CM4 7114543 YP_002420540.1 CDS Mchl_1749 NC_011757.1 1802194 1803165 D PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_1471 methyltransferase type 11; type 11 methyltransferase 1802194..1803165 Methylobacterium extorquens CM4 7114544 YP_002420541.1 CDS Mchl_1750 NC_011757.1 1803173 1804675 D PFAM: metallophosphoesterase; 5'-nucleotidase domain protein; KEGG: mex:Mext_1472 5'-nucleotidase; 5'-nucleotidase 1803173..1804675 Methylobacterium extorquens CM4 7114545 YP_002420542.1 CDS Mchl_1751 NC_011757.1 1804843 1805547 D PFAM: uracil-DNA glycosylase superfamily; KEGG: mex:Mext_1473 uracil-DNA glycosylase superfamily protein; uracil-DNA glycosylase superfamily protein 1804843..1805547 Methylobacterium extorquens CM4 7114546 YP_002420543.1 CDS Mchl_1752 NC_011757.1 1805790 1806620 D SMART: rhodanese; KEGG: mex:Mext_1474 rhodanese; rhodanese 1805790..1806620 Methylobacterium extorquens CM4 7114547 YP_002420544.1 CDS Mchl_1753 NC_011757.1 1806623 1808026 D TIGRFAM: chromate transporter chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: mex:Mext_1475 chromate transporter; chromate ion transporter (CHR) family chromate transporter 1806623..1808026 Methylobacterium extorquens CM4 7114548 YP_002420545.1 CDS Mchl_1754 NC_011757.1 1808170 1808367 R KEGG: mex:Mext_1476 hypothetical protein; hypothetical protein complement(1808170..1808367) Methylobacterium extorquens CM4 7114549 YP_002420546.1 CDS Mchl_1755 NC_011757.1 1808501 1809403 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mex:Mext_1477 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(1808501..1809403) Methylobacterium extorquens CM4 7114550 YP_002420547.1 CDS Mchl_1756 NC_011757.1 1809878 1812790 D TIGRFAM: preprotein translocase, Secsubunit alpha; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: mex:Mext_1478 preprotein translocase, Secsubunit alpha; preprotein translocase subunit SecA 1809878..1812790 Methylobacterium extorquens CM4 7114551 YP_002420548.1 CDS Mchl_1757 NC_011757.1 1812798 1813208 D PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_1479 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 1812798..1813208 Methylobacterium extorquens CM4 7114552 YP_002420549.1 CDS ampC NC_011757.1 1813213 1814376 R PFAM: beta-lactamase; KEGG: mex:Mext_1480 beta-lactamase; beta-lactamase complement(1813213..1814376) Methylobacterium extorquens CM4 7114553 YP_002420550.1 CDS Mchl_1759 NC_011757.1 1814500 1815414 D PFAM: 4'-phosphopantetheinyl transferase; KEGG: mex:Mext_1481 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 1814500..1815414 Methylobacterium extorquens CM4 7114554 YP_002420551.1 CDS Mchl_1760 NC_011757.1 1815411 1815866 D PFAM: NUDIX hydrolase; KEGG: mex:Mext_1482 NUDIX hydrolase; NUDIX hydrolase 1815411..1815866 Methylobacterium extorquens CM4 7114555 YP_002420552.1 CDS Mchl_1761 NC_011757.1 1815901 1817169 R TIGRFAM: esterase, PHB depolymerase family; PFAM: esterase PHB depolymerase; KEGG: mex:Mext_1483 PHB depolymerase family esterase; esterase, PHB depolymerase family complement(1815901..1817169) Methylobacterium extorquens CM4 7114556 YP_002420553.1 CDS Mchl_1762 NC_011757.1 1817243 1817692 R KEGG: mex:Mext_1484 CopG family transcriptional regulator; CopG family transcriptional regulator complement(1817243..1817692) Methylobacterium extorquens CM4 7114557 YP_002420554.1 CDS Mchl_1763 NC_011757.1 1817899 1818609 R KEGG: mex:Mext_1485 DNA polymerase III epsilon subunit; TIGRFAM: DNA polymerase III subunit epsilon; PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; DNA polymerase III subunit epsilon complement(1817899..1818609) Methylobacterium extorquens CM4 7114558 YP_002420555.1 CDS Mchl_1764 NC_011757.1 1818732 1819016 D PFAM: protein of unknown function DUF497; KEGG: mex:Mext_1486 hypothetical protein; hypothetical protein 1818732..1819016 Methylobacterium extorquens CM4 7114559 YP_002420556.1 CDS Mchl_1765 NC_011757.1 1819000 1819335 D SMART: helix-turn-helix domain protein; KEGG: mex:Mext_1487 helix-turn-helix domain-containing protein; XRE family transcriptional regulator 1819000..1819335 Methylobacterium extorquens CM4 7114560 YP_002420557.1 CDS Mchl_1766 NC_011757.1 1819307 1819960 R KEGG: mex:Mext_1488 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase complement(1819307..1819960) Methylobacterium extorquens CM4 7114561 YP_002420558.1 CDS Mchl_1767 NC_011757.1 1819957 1820823 R TIGRFAM: shikimate 5-dehydrogenase; PFAM: shikimate/quinate 5-dehydrogenase; shikimate dehydrogenase substrate binding domain protein; KEGG: mex:Mext_1489 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase complement(1819957..1820823) Methylobacterium extorquens CM4 7114562 YP_002420559.1 CDS Mchl_1768 NC_011757.1 1820823 1821842 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mex:Mext_1490 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter complement(1820823..1821842) Methylobacterium extorquens CM4 7114563 YP_002420560.1 CDS Mchl_1769 NC_011757.1 1821857 1822471 R TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: mex:Mext_1491 maf protein; maf protein complement(1821857..1822471) Methylobacterium extorquens CM4 7114564 YP_002420561.1 CDS Mchl_1770 NC_011757.1 1822488 1823624 R KEGG: mex:Mext_1492 capsular polysaccharide biosynthesis protein-like protein; capsular polysaccharide biosynthesis protein-like protein complement(1822488..1823624) Methylobacterium extorquens CM4 7114565 YP_002420562.1 CDS Mchl_1771 NC_011757.1 1823636 1824466 R PFAM: protein of unknown function DUF299; KEGG: mex:Mext_1493 hypothetical protein; hypothetical protein complement(1823636..1824466) Methylobacterium extorquens CM4 7114566 YP_002420563.1 CDS Mchl_1772 NC_011757.1 1825214 1826296 D KEGG: mex:Mext_1494 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 1825214..1826296 Methylobacterium extorquens CM4 7114567 YP_002420564.1 CDS Mchl_1773 NC_011757.1 1826293 1826742 D PFAM: NUDIX hydrolase; KEGG: mpo:Mpop_1495 NUDIX hydrolase; NUDIX hydrolase 1826293..1826742 Methylobacterium extorquens CM4 7114568 YP_002420565.1 CDS Mchl_1774 NC_011757.1 1826735 1827175 D PFAM: conserved hypothetical protein; KEGG: mex:Mext_1495 hypothetical protein; hypothetical protein 1826735..1827175 Methylobacterium extorquens CM4 7114569 YP_002420566.1 CDS Mchl_1775 NC_011757.1 1827261 1827602 D KEGG: mex:Mext_1496 hypothetical protein; hypothetical protein 1827261..1827602 Methylobacterium extorquens CM4 7114570 YP_002420567.1 CDS hisG NC_011757.1 1827751 1828728 R long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase complement(1827751..1828728) Methylobacterium extorquens CM4 7114571 YP_002420568.1 CDS hisZ NC_011757.1 1828725 1829888 R May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit complement(1828725..1829888) Methylobacterium extorquens CM4 7114572 YP_002420569.1 CDS Mchl_1778 NC_011757.1 1830034 1830921 R TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_1499 HAD family hydrolase; HAD-superfamily hydrolase complement(1830034..1830921) Methylobacterium extorquens CM4 7114573 YP_002420570.1 CDS Mchl_1779 NC_011757.1 1831042 1831668 R PFAM: regulatory protein TetR; KEGG: mex:Mext_1500 regulatory protein TetR; regulatory protein TetR complement(1831042..1831668) Methylobacterium extorquens CM4 7114574 YP_002420571.1 CDS Mchl_1780 NC_011757.1 1831860 1835276 D Synthesizes thioester adducts of fatty acids enzymatically to the phosphopantetheine group of acyl carrier protein; acylglycerophosphoethanolamine acyltransferase 1831860..1835276 Methylobacterium extorquens CM4 7114575 YP_002420572.1 CDS Mchl_1781 NC_011757.1 1835421 1835822 D PFAM: protein of unknown function DUF1044; KEGG: mex:Mext_1502 hypothetical protein; hypothetical protein 1835421..1835822 Methylobacterium extorquens CM4 7114576 YP_002420573.1 CDS Mchl_1782 NC_011757.1 1835806 1836129 D KEGG: mex:Mext_1503 DNA-binding protein; XRE family transcriptional regulator 1835806..1836129 Methylobacterium extorquens CM4 7114577 YP_002420574.1 CDS Mchl_1783 NC_011757.1 1836276 1836962 D PFAM: DSBA oxidoreductase; KEGG: mex:Mext_1504 DsbA oxidoreductase; DSBA oxidoreductase 1836276..1836962 Methylobacterium extorquens CM4 7114578 YP_002420575.1 CDS Mchl_1784 NC_011757.1 1836984 1837976 R PFAM: rubrerythrin; protein of unknown function DUF125 transmembrane; KEGG: mex:Mext_1505 rubrerythrin; rubrerythrin complement(1836984..1837976) Methylobacterium extorquens CM4 7114579 YP_002420576.1 CDS Mchl_1785 NC_011757.1 1838025 1839047 R KEGG: mex:Mext_1506 carbonic anhydrase; carbonic anhydrase complement(1838025..1839047) Methylobacterium extorquens CM4 7114580 YP_002420577.1 CDS Mchl_1786 NC_011757.1 1839207 1839659 D PFAM: molybdopterin biosynthesis MoaE protein; KEGG: mex:Mext_1507 molybdopterin biosynthesis MoaE protein; molybdopterin biosynthesis MoaE protein 1839207..1839659 Methylobacterium extorquens CM4 7114581 YP_002420578.1 CDS Mchl_1787 NC_011757.1 1839751 1840929 D PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_1508 hypothetical protein; hypothetical protein 1839751..1840929 Methylobacterium extorquens CM4 7114582 YP_002420579.1 CDS Mchl_1788 NC_011757.1 1840980 1842632 R malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase complement(1840980..1842632) Methylobacterium extorquens CM4 7114583 YP_002420580.1 CDS Mchl_1789 NC_011757.1 1842965 1844128 R PFAM: von Willebrand factor A; SMART: von Willebrand factor type A; KEGG: mex:Mext_1510 von Willebrand factor A; von Willebrand factor A complement(1842965..1844128) Methylobacterium extorquens CM4 7114584 YP_002420581.1 CDS Mchl_1790 NC_011757.1 1844125 1846446 R KEGG: mpo:Mpop_1511 hypothetical protein; hypothetical protein complement(1844125..1846446) Methylobacterium extorquens CM4 7114585 YP_002420582.1 CDS Mchl_1791 NC_011757.1 1846455 1847555 R PFAM: ATPase associated with various cellular activities AAA_5; KEGG: mex:Mext_1512 ATPase; ATPase AAA complement(1846455..1847555) Methylobacterium extorquens CM4 7114586 YP_002420583.1 CDS Mchl_1792 NC_011757.1 1847552 1849135 R KEGG: mpo:Mpop_1513 hypothetical protein; hypothetical protein complement(1847552..1849135) Methylobacterium extorquens CM4 7114587 YP_002420584.1 CDS Mchl_1793 NC_011757.1 1849135 1850502 R PFAM: hypothetical protein; KEGG: mex:Mext_1514 zinc finger SWIM domain-containing protein; hypothetical protein complement(1849135..1850502) Methylobacterium extorquens CM4 7114588 YP_002420585.1 CDS Mchl_1794 NC_011757.1 1850698 1852188 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(1850698..1852188) Methylobacterium extorquens CM4 7114589 YP_002420586.1 CDS Mchl_1795 NC_011757.1 1852334 1852582 D TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: mex:Mext_1516 addiction module antidote protein; CopG/Arc/MetJ family addiction module antidote protein 1852334..1852582 Methylobacterium extorquens CM4 7114590 YP_002420587.1 CDS Mchl_1796 NC_011757.1 1852579 1852869 D PFAM: plasmid stabilization system; KEGG: mex:Mext_1517 plasmid stabilization system protein; plasmid stabilization system 1852579..1852869 Methylobacterium extorquens CM4 7114591 YP_002420588.1 CDS Mchl_1797 NC_011757.1 1852927 1853589 D PFAM: uracil-DNA glycosylase superfamily; KEGG: mex:Mext_1518 uracil-DNA glycosylase superfamily protein; uracil-DNA glycosylase superfamily protein 1852927..1853589 Methylobacterium extorquens CM4 7114592 YP_002420589.1 CDS Mchl_1798 NC_011757.1 1853597 1855123 R KEGG: mex:Mext_1519 hypothetical protein; hypothetical protein complement(1853597..1855123) Methylobacterium extorquens CM4 7114593 YP_002420590.1 CDS Mchl_1799 NC_011757.1 1855448 1856146 D type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 1855448..1856146 Methylobacterium extorquens CM4 7114594 YP_002420591.1 CDS Mchl_1800 NC_011757.1 1856149 1856493 D PFAM: protein of unknown function DUF1330; KEGG: mex:Mext_1521 hypothetical protein; hypothetical protein 1856149..1856493 Methylobacterium extorquens CM4 7114595 YP_002420592.1 CDS Mchl_1801 NC_011757.1 1856513 1857136 R PFAM: regulatory protein TetR; KEGG: mex:Mext_1522 regulatory protein TetR; TetR family transcriptional regulator complement(1856513..1857136) Methylobacterium extorquens CM4 7114596 YP_002420593.1 CDS Mchl_1802 NC_011757.1 1857359 1857559 R KEGG: mex:Mext_1523 hypothetical protein; hypothetical protein complement(1857359..1857559) Methylobacterium extorquens CM4 7114597 YP_002420594.1 CDS Mchl_1803 NC_011757.1 1857762 1858268 R TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: mex:Mext_1524 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut complement(1857762..1858268) Methylobacterium extorquens CM4 7114598 YP_002420595.1 CDS Mchl_1804 NC_011757.1 1858365 1859147 D KEGG: mex:Mext_1525 NUDIX hydrolase; NUDIX hydrolase 1858365..1859147 Methylobacterium extorquens CM4 7114599 YP_002420596.1 CDS Mchl_1805 NC_011757.1 1859153 1859677 D PFAM: NUDIX hydrolase; KEGG: mex:Mext_1525 NUDIX hydrolase; NUDIX hydrolase 1859153..1859677 Methylobacterium extorquens CM4 7114600 YP_002420597.1 CDS Mchl_1806 NC_011757.1 1859904 1860590 D PFAM: carbonic anhydrase; KEGG: mex:Mext_1526 carbonate dehydratase; carbonate dehydratase 1859904..1860590 Methylobacterium extorquens CM4 7114601 YP_002420598.1 CDS Mchl_1807 NC_011757.1 1860808 1861731 R PFAM: inositol monophosphatase; KEGG: mex:Mext_1527 inositol monophosphatase; inositol monophosphatase complement(1860808..1861731) Methylobacterium extorquens CM4 7114602 YP_002420599.1 CDS Mchl_1808 NC_011757.1 1862086 1862826 D KEGG: mex:Mext_1528 hypothetical protein; hypothetical protein 1862086..1862826 Methylobacterium extorquens CM4 7114603 YP_002420600.1 CDS Mchl_1809 NC_011757.1 1863004 1865754 D PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: mex:Mext_1529 ATPase domain-containing protein; CheA signal transduction histidine kinase 1863004..1865754 Methylobacterium extorquens CM4 7114604 YP_002420601.1 CDS Mchl_1810 NC_011757.1 1865787 1866266 D PFAM: CheW domain protein; KEGG: mex:Mext_1530 CheW domain-containing protein; CheW protein 1865787..1866266 Methylobacterium extorquens CM4 7114605 YP_002420602.1 CDS Mchl_1811 NC_011757.1 1866287 1866709 D PFAM: response regulator receiver; KEGG: mex:Mext_1531 response regulator receiver; response regulator receiver protein 1866287..1866709 Methylobacterium extorquens CM4 7114606 YP_002420603.1 CDS Mchl_1812 NC_011757.1 1866776 1867924 D PFAM: CheB methylesterase; response regulator receiver; KEGG: mex:Mext_1532 protein-glutamate methylesterase; response regulator receiver modulated CheB methylesterase 1866776..1867924 Methylobacterium extorquens CM4 7114607 YP_002420604.1 CDS Mchl_1813 NC_011757.1 1867924 1868781 D PFAM: MCP methyltransferase CheR-type; KEGG: mex:Mext_1533 protein-glutamate O-methyltransferase; CheR-typeMCP methyltransferase 1867924..1868781 Methylobacterium extorquens CM4 7114608 YP_002420605.1 CDS Mchl_1814 NC_011757.1 1868828 1869553 D PFAM: allophanate hydrolase subunit 1; KEGG: mex:Mext_1534 allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 1868828..1869553 Methylobacterium extorquens CM4 7113542 YP_002420606.1 CDS Mchl_1815 NC_011757.1 1869550 1870569 D KEGG: mex:Mext_1535 UreA amidolyase related protein; TIGRFAM: urea amidolyase related protein; PFAM: allophanate hydrolase subunit 2; urea amidolyase-like protein 1869550..1870569 Methylobacterium extorquens CM4 7113543 YP_002420607.1 CDS Mchl_1816 NC_011757.1 1870616 1871710 D KEGG: mex:Mext_1536 UV damage repair endonuclease; UV damage repair endonuclease 1870616..1871710 Methylobacterium extorquens CM4 7113544 YP_002420608.1 CDS Mchl_1817 NC_011757.1 1871831 1874563 D KEGG: mex:Mext_1537 hypothetical protein; hypothetical protein 1871831..1874563 Methylobacterium extorquens CM4 7113545 YP_002420609.1 CDS Mchl_1818 NC_011757.1 1874633 1874818 D PFAM: Hypoxia induced protein conserved region; KEGG: mex:Mext_1538 hypoxia induced protein region; Hypoxia induced protein conserved region 1874633..1874818 Methylobacterium extorquens CM4 7113546 YP_002420610.1 CDS Mchl_1819 NC_011757.1 1874851 1875354 R KEGG: mex:Mext_1539 hypothetical protein; hypothetical protein complement(1874851..1875354) Methylobacterium extorquens CM4 7113547 YP_002420611.1 CDS Mchl_1820 NC_011757.1 1875606 1876244 D KEGG: mex:Mext_1540 hypothetical protein; hypothetical protein 1875606..1876244 Methylobacterium extorquens CM4 7113548 YP_002420612.1 CDS Mchl_1821 NC_011757.1 1876365 1876937 D TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: mex:Mext_1541 ATP--cobalamin adenosyltransferase; ATP/cobalamin adenosyltransferase 1876365..1876937 Methylobacterium extorquens CM4 7113549 YP_002420613.1 CDS Mchl_1822 NC_011757.1 1877100 1877849 D PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: mex:Mext_1542 electron transfer flavoprotein alpha/beta-subunit; electron transfer flavoprotein alpha/beta-subunit 1877100..1877849 Methylobacterium extorquens CM4 7113550 YP_002420614.1 CDS Mchl_1823 NC_011757.1 1877930 1878883 D PFAM: electron transfer flavoprotein alpha/beta-subunit ; electron transfer flavoprotein subunit alpha; KEGG: mex:Mext_1543 electron transfer flavoprotein subunit alpha; electron transfer flavoprotein subunit alpha 1877930..1878883 Methylobacterium extorquens CM4 7113551 YP_002420615.1 CDS Mchl_1824 NC_011757.1 1879042 1879923 D PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: mex:Mext_1544 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase 1879042..1879923 Methylobacterium extorquens CM4 7113552 YP_002420616.1 CDS Mchl_1825 NC_011757.1 1880005 1880283 R KEGG: mex:Mext_1545 hypothetical protein; hypothetical protein complement(1880005..1880283) Methylobacterium extorquens CM4 7113553 YP_002420617.1 CDS Mchl_1826 NC_011757.1 1880475 1881485 R TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_1546 PIG3 family NAD(P)H quinone oxidoreductase; NAD(P)H quinone oxidoreductase, PIG3 family complement(1880475..1881485) Methylobacterium extorquens CM4 7113554 YP_002420618.1 CDS Mchl_1827 NC_011757.1 1881630 1882280 R KEGG: mex:Mext_1547 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; uracil phosphoribosyltransferase complement(1881630..1882280) Methylobacterium extorquens CM4 7113555 YP_002420619.1 CDS Mchl_1828 NC_011757.1 1882377 1884470 R KEGG: mex:Mext_1549 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX complement(1882377..1884470) Methylobacterium extorquens CM4 7113556 YP_002420620.1 CDS Mchl_1829 NC_011757.1 1884553 1885977 R PFAM: glycosyl transferase family 20; KEGG: mex:Mext_1550 alpha,alpha-trehalose-phosphate synthase (UDP-forming); alpha,alpha-trehalose-phosphate synthase complement(1884553..1885977) Methylobacterium extorquens CM4 7113557 YP_002420621.1 CDS Mchl_1830 NC_011757.1 1886508 1886987 D KEGG: mex:Mext_1551 hypothetical protein; hypothetical protein 1886508..1886987 Methylobacterium extorquens CM4 7113558 YP_002420622.1 CDS Mchl_1831 NC_011757.1 1886999 1887406 D PFAM: protein of unknown function DUF1469; KEGG: mex:Mext_1552 hypothetical protein; hypothetical protein 1886999..1887406 Methylobacterium extorquens CM4 7113559 YP_002420623.1 CDS Mchl_1832 NC_011757.1 1887403 1887789 D KEGG: mex:Mext_1553 hypothetical protein; hypothetical protein 1887403..1887789 Methylobacterium extorquens CM4 7113560 YP_002420624.1 CDS Mchl_1833 NC_011757.1 1887854 1888690 D KEGG: mex:Mext_1554 hypothetical protein; hypothetical protein 1887854..1888690 Methylobacterium extorquens CM4 7113561 YP_002420625.1 CDS hisS NC_011757.1 1888770 1890281 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(1888770..1890281) Methylobacterium extorquens CM4 7113562 YP_002420626.1 CDS Mchl_1835 NC_011757.1 1890365 1890736 R TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: mex:Mext_1556 export-related chaperone CsaA; export-related chaperone CsaA complement(1890365..1890736) Methylobacterium extorquens CM4 7113563 YP_002420627.1 CDS Mchl_1836 NC_011757.1 1890832 1891350 R KEGG: mex:Mext_1557 hypothetical protein; hypothetical protein complement(1890832..1891350) Methylobacterium extorquens CM4 7113564 YP_002420628.1 CDS Mchl_1837 NC_011757.1 1891417 1892670 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1558 major facilitator transporter; major facilitator superfamily protein complement(1891417..1892670) Methylobacterium extorquens CM4 7113565 YP_002420629.1 CDS Mchl_1838 NC_011757.1 1892961 1893467 R TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; KEGG: mex:Mext_1559 protein-export protein SecB; protein-export protein SecB complement(1892961..1893467) Methylobacterium extorquens CM4 7113566 YP_002420630.1 CDS Mchl_1839 NC_011757.1 1893929 1894648 D PFAM: import inner membrane translocase subunit Tim44; KEGG: mex:Mext_1560 import inner membrane translocase subunit Tim44; import inner membrane translocase subunit Tim44 1893929..1894648 Methylobacterium extorquens CM4 7113567 YP_002420631.1 CDS Mchl_1840 NC_011757.1 1894661 1895917 D PFAM: MltA domain protein; 3D domain protein; KEGG: mex:Mext_1561 MltA domain-containing protein; MltA domain-containing protein 1894661..1895917 Methylobacterium extorquens CM4 7113568 YP_002420632.1 CDS Mchl_1841 NC_011757.1 1895914 1896699 D PFAM: Smr protein/MutS2; KEGG: mex:Mext_1562 Smr protein/MutS2; Smr protein/MutS2 1895914..1896699 Methylobacterium extorquens CM4 7113569 YP_002420633.1 CDS rho NC_011757.1 1896952 1898295 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 1896952..1898295 Methylobacterium extorquens CM4 7113570 YP_002420634.1 CDS Mchl_1843 NC_011757.1 1898569 1900302 D catalyzes the formation of acetate from pyruvate; pyruvate dehydrogenase 1898569..1900302 Methylobacterium extorquens CM4 7113571 YP_002420635.1 CDS Mchl_1844 NC_011757.1 1900415 1901335 R KEGG: mex:Mext_1565 hypothetical protein; hypothetical protein complement(1900415..1901335) Methylobacterium extorquens CM4 7113572 YP_002420636.1 CDS Mchl_1845 NC_011757.1 1901641 1902387 R PFAM: integral membrane protein TerC; KEGG: mex:Mext_1566 integral membrane protein TerC; integral membrane protein TerC complement(1901641..1902387) Methylobacterium extorquens CM4 7113573 YP_002420637.1 CDS Mchl_1846 NC_011757.1 1902404 1903333 R similar to YegS from E. coli; lipid kinase complement(1902404..1903333) Methylobacterium extorquens CM4 7113574 YP_002420638.1 CDS Mchl_1847 NC_011757.1 1903911 1904726 D KEGG: mex:Mext_1568 hypothetical protein; hypothetical protein 1903911..1904726 Methylobacterium extorquens CM4 7113575 YP_002420639.1 CDS Mchl_1848 NC_011757.1 1905037 1906347 D KEGG: mex:Mext_1569 hypothetical protein; hypothetical protein 1905037..1906347 Methylobacterium extorquens CM4 7113576 YP_002420640.1 CDS Mchl_1849 NC_011757.1 1906378 1907256 R PFAM: phosphoesterase PA-phosphatase related; KEGG: mex:Mext_1570 acid phosphatase; acid phosphatase complement(1906378..1907256) Methylobacterium extorquens CM4 7113577 YP_002420641.1 CDS Mchl_1850 NC_011757.1 1907423 1908301 R KEGG: mpo:Mpop_1668 hypothetical protein; hypothetical protein complement(1907423..1908301) Methylobacterium extorquens CM4 7113578 YP_002420642.1 CDS Mchl_1851 NC_011757.1 1908310 1908606 R KEGG: mex:Mext_1572 helix-turn-helix domain-containing protein; XRE family transcriptional regulator complement(1908310..1908606) Methylobacterium extorquens CM4 7113579 YP_002420643.1 CDS Mchl_1852 NC_011757.1 1908637 1909017 R KEGG: mex:Mext_1573 RelE-like cytotoxic translational repressor of toxin-antitoxin stability system; RelE-like cytotoxic translational repressor of toxin-antitoxin stability system complement(1908637..1909017) Methylobacterium extorquens CM4 7113580 YP_002420644.1 CDS Mchl_1853 NC_011757.1 1909074 1909916 R KEGG: mex:Mext_1574 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; PFAM: transferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase complement(1909074..1909916) Methylobacterium extorquens CM4 7113581 YP_002420645.1 CDS Mchl_1854 NC_011757.1 1910079 1910546 R PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_1575 cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(1910079..1910546) Methylobacterium extorquens CM4 7113582 YP_002420646.1 CDS Mchl_1855 NC_011757.1 1910733 1911419 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_1576 response regulator receiver; transcriptional regulator complement(1910733..1911419) Methylobacterium extorquens CM4 7113583 YP_002420647.1 CDS Mchl_1856 NC_011757.1 1911710 1912303 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_1577 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1911710..1912303 Methylobacterium extorquens CM4 7113584 YP_002420648.1 CDS Mchl_1857 NC_011757.1 1912343 1913086 R PFAM: alanine racemase domain protein; KEGG: mex:Mext_1578 alanine racemase domain-containing protein; alanine racemase domain-containing protein complement(1912343..1913086) Methylobacterium extorquens CM4 7113585 YP_002420649.1 CDS Mchl_1858 NC_011757.1 1913395 1916022 D TIGRFAM: leucyl-tRNA synthetase; KEGG: mex:Mext_1579 leucyl-tRNA synthetase; leucyl-tRNA synthetase 1913395..1916022 Methylobacterium extorquens CM4 7113586 YP_002420650.1 CDS trmE NC_011757.1 1916113 1917447 D in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 1916113..1917447 Methylobacterium extorquens CM4 7113587 YP_002420651.1 CDS Mchl_1860 NC_011757.1 1917461 1918483 R TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; KEGG: mex:Mext_1581 PAS sensor protein; PAS sensor protein complement(1917461..1918483) Methylobacterium extorquens CM4 7113588 YP_002420652.1 CDS Mchl_1861 NC_011757.1 1918836 1919117 D KEGG: mex:Mext_1582 hypothetical protein; hypothetical protein 1918836..1919117 Methylobacterium extorquens CM4 7113589 YP_002420653.1 CDS Mchl_1862 NC_011757.1 1919291 1921165 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 1919291..1921165 Methylobacterium extorquens CM4 7113590 YP_002420654.1 CDS Mchl_1863 NC_011757.1 1921200 1921835 D TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: mex:Mext_1584 methyltransferase GidB; methyltransferase GidB 1921200..1921835 Methylobacterium extorquens CM4 7113591 YP_002420655.1 CDS Mchl_1864 NC_011757.1 1921832 1922692 D PFAM: cobyrinic acid ac-diamide synthase; KEGG: mex:Mext_1585 cobyrinic acid ac-diamide synthase; cobyrinic acid ac-diamide synthase 1921832..1922692 Methylobacterium extorquens CM4 7113592 YP_002420656.1 CDS Mchl_1865 NC_011757.1 1922726 1923622 D TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: mex:Mext_1586 ParB-like partition protein; parB-like partition protein 1922726..1923622 Methylobacterium extorquens CM4 7113593 YP_002420657.1 CDS holA NC_011757.1 1923764 1924795 R required for the assembly and function of the DNAX complex which are required for the assembly of the subunit beta onto primed DNA; DNA polymerase III subunit delta complement(1923764..1924795) Methylobacterium extorquens CM4 7113594 YP_002420658.1 CDS Mchl_1867 NC_011757.1 1924806 1925372 R KEGG: mex:Mext_1588 hypothetical protein; hypothetical protein complement(1924806..1925372) Methylobacterium extorquens CM4 7113595 YP_002420659.1 CDS Mchl_1868 NC_011757.1 1925758 1926102 D KEGG: mex:Mext_1589 hypothetical protein; hypothetical protein 1925758..1926102 Methylobacterium extorquens CM4 7113596 YP_002420660.1 CDS Mchl_1869 NC_011757.1 1926237 1927340 D KEGG: mex:Mext_1590 hypothetical protein; hypothetical protein 1926237..1927340 Methylobacterium extorquens CM4 7113597 YP_002420661.1 CDS Mchl_1870 NC_011757.1 1927393 1927689 D KEGG: lch:Lcho_2218 hypothetical protein; hypothetical protein 1927393..1927689 Methylobacterium extorquens CM4 7113598 YP_002420662.1 CDS Mchl_1871 NC_011757.1 1927676 1928035 D KEGG: rle:pRL70167 hypothetical protein; hypothetical protein 1927676..1928035 Methylobacterium extorquens CM4 7113599 YP_002420663.1 CDS Mchl_1872 NC_011757.1 1928072 1929016 R KEGG: mex:Mext_1591 hypothetical protein; hypothetical protein complement(1928072..1929016) Methylobacterium extorquens CM4 7113600 YP_002420664.1 CDS Mchl_1873 NC_011757.1 1929034 1929972 R PFAM: prephenate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mex:Mext_1592 prephenate dehydrogenase; prephenate dehydrogenase complement(1929034..1929972) Methylobacterium extorquens CM4 7113601 YP_002420665.1 CDS Mchl_1874 NC_011757.1 1929969 1931087 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(1929969..1931087) Methylobacterium extorquens CM4 7113602 YP_002420666.1 CDS Mchl_1875 NC_011757.1 1931201 1931698 R KEGG: mex:Mext_1594 hypothetical protein; hypothetical protein complement(1931201..1931698) Methylobacterium extorquens CM4 7113603 YP_002420667.1 CDS Mchl_1876 NC_011757.1 1931845 1934079 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1595 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(1931845..1934079) Methylobacterium extorquens CM4 7113604 YP_002420668.1 CDS Mchl_1877 NC_011757.1 1934351 1936357 R PFAM: K potassium transporter; KEGG: mex:Mext_1596 K potassium transporter; K potassium transporter complement(1934351..1936357) Methylobacterium extorquens CM4 7113605 YP_002420669.1 CDS ispG NC_011757.1 1936676 1938004 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(1936676..1938004) Methylobacterium extorquens CM4 7113606 YP_002420670.1 CDS Mchl_1879 NC_011757.1 1938336 1939580 D PFAM: patatin; KEGG: mex:Mext_1598 patatin; patatin 1938336..1939580 Methylobacterium extorquens CM4 7113607 YP_002420671.1 CDS Mchl_1880 NC_011757.1 1939672 1940736 D PFAM: regulatory protein ArsR; UbiE/COQ5 methyltransferase; methyltransferase small; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_1599 methyltransferase type 11; ArsR family transcriptional regulator 1939672..1940736 Methylobacterium extorquens CM4 7113608 YP_002420672.1 CDS Mchl_1881 NC_011757.1 1940836 1941768 D KEGG: mex:Mext_1600 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 1940836..1941768 Methylobacterium extorquens CM4 7113609 YP_002420673.1 CDS metH NC_011757.1 1941968 1945720 D one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 1941968..1945720 Methylobacterium extorquens CM4 7113610 YP_002420674.1 CDS Mchl_1883 NC_011757.1 1945864 1946079 D KEGG: mex:Mext_1602 hypothetical protein; hypothetical protein 1945864..1946079 Methylobacterium extorquens CM4 7113611 YP_002420675.1 CDS Mchl_1884 NC_011757.1 1946173 1947375 R KEGG: mex:Mext_1603 acyl-CoA N-acyltransferase related protein; acyl-CoA N-acyltransferase-like protein complement(1946173..1947375) Methylobacterium extorquens CM4 7113612 YP_002420676.1 CDS Mchl_1885 NC_011757.1 1947582 1948634 D PFAM: polysaccharide deacetylase; KEGG: mex:Mext_1604 polysaccharide deacetylase; polysaccharide deacetylase 1947582..1948634 Methylobacterium extorquens CM4 7113613 YP_002420677.1 CDS Mchl_1886 NC_011757.1 1948647 1949084 R KEGG: mex:Mext_1605 hypothetical protein; hypothetical protein complement(1948647..1949084) Methylobacterium extorquens CM4 7113614 YP_002420678.1 CDS Mchl_1887 NC_011757.1 1949220 1949426 R KEGG: mex:Mext_1606 hypothetical protein; hypothetical protein complement(1949220..1949426) Methylobacterium extorquens CM4 7113615 YP_002420679.1 CDS Mchl_1888 NC_011757.1 1949756 1950904 D PFAM: cytochrome oxidase assembly; KEGG: mex:Mext_1607 cytochrome oxidase assembly; cytochrome oxidase assembly 1949756..1950904 Methylobacterium extorquens CM4 7113616 YP_002420680.1 CDS Mchl_1889 NC_011757.1 1951205 1951885 D PFAM: Hly-III family protein; KEGG: mex:Mext_1608 Hly-III family protein; Hly-III family protein 1951205..1951885 Methylobacterium extorquens CM4 7113617 YP_002420681.1 CDS Mchl_1890 NC_011757.1 1952007 1952270 R KEGG: mpo:Mpop_1630 hypothetical protein; hypothetical protein complement(1952007..1952270) Methylobacterium extorquens CM4 7113618 YP_002420682.1 CDS Mchl_1891 NC_011757.1 1952708 1954600 D required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 1952708..1954600 Methylobacterium extorquens CM4 7113619 YP_002420683.1 CDS Mchl_1892 NC_011757.1 1954817 1955164 D KEGG: mex:Mext_1611 hypothetical protein; hypothetical protein 1954817..1955164 Methylobacterium extorquens CM4 7113620 YP_002420684.1 CDS Mchl_1893 NC_011757.1 1955341 1955715 R PFAM: flagellar FlaF family protein; KEGG: mex:Mext_1612 flagellar FlaF family protein; flagellar FlaF family protein complement(1955341..1955715) Methylobacterium extorquens CM4 7113621 YP_002420685.1 CDS Mchl_1894 NC_011757.1 1955863 1956132 D KEGG: mex:Mext_1613 hypothetical protein; hypothetical protein 1955863..1956132 Methylobacterium extorquens CM4 7113622 YP_002420686.1 CDS Mchl_1895 NC_011757.1 1956257 1956397 R KEGG: mpo:Mpop_1623 hypothetical protein; hypothetical protein complement(1956257..1956397) Methylobacterium extorquens CM4 7113623 YP_002420687.1 CDS Mchl_1896 NC_011757.1 1956582 1956908 R KEGG: mex:Mext_1614 hypothetical protein; hypothetical protein complement(1956582..1956908) Methylobacterium extorquens CM4 7116549 YP_002420688.1 CDS Mchl_1897 NC_011757.1 1957144 1957713 R PFAM: metallophosphoesterase; KEGG: mex:Mext_1615 metallophosphoesterase; metallophosphoesterase complement(1957144..1957713) Methylobacterium extorquens CM4 7116712 YP_002420689.1 CDS Mchl_1898 NC_011757.1 1957771 1958871 R TIGRFAM: TonB family protein; KEGG: mex:Mext_1616 TonB family protein; TonB family protein complement(1957771..1958871) Methylobacterium extorquens CM4 7116713 YP_002420690.1 CDS Mchl_1899 NC_011757.1 1958912 1959373 R TIGRFAM: protein TolR; PFAM: biopolymertransporter ExbD/TolR; KEGG: mex:Mext_1617 protein TolR; protein TolR complement(1958912..1959373) Methylobacterium extorquens CM4 7116714 YP_002420691.1 CDS Mchl_1900 NC_011757.1 1959458 1960159 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: mex:Mext_1618 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(1959458..1960159) Methylobacterium extorquens CM4 7116715 YP_002420692.1 CDS Mchl_1901 NC_011757.1 1960231 1960713 R KEGG: mex:Mext_1619 hypothetical protein; hypothetical protein complement(1960231..1960713) Methylobacterium extorquens CM4 7116716 YP_002420693.1 CDS Mchl_1902 NC_011757.1 1961282 1961713 D PFAM: heat shock protein Hsp20; KEGG: mex:Mext_1620 heat shock protein HSP20; heat shock protein Hsp20 1961282..1961713 Methylobacterium extorquens CM4 7116717 YP_002420694.1 CDS Mchl_1903 NC_011757.1 1961887 1962168 D PFAM: protein of unknown function DUF1150; KEGG: mex:Mext_1621 hypothetical protein; hypothetical protein 1961887..1962168 Methylobacterium extorquens CM4 7116718 YP_002420695.1 CDS Mchl_1904 NC_011757.1 1962200 1963051 R KEGG: mex:Mext_1622 hypothetical protein; hypothetical protein complement(1962200..1963051) Methylobacterium extorquens CM4 7116719 YP_002420696.1 CDS Mchl_1905 NC_011757.1 1963111 1964340 D PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1623 glycosyl transferase group 1; group 1 glycosyl transferase 1963111..1964340 Methylobacterium extorquens CM4 7116720 YP_002420697.1 CDS infC NC_011757.1 1964517 1965038 D IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 1964517..1965038 Methylobacterium extorquens CM4 7116721 YP_002420698.1 CDS Mchl_1907 NC_011757.1 1965230 1967566 R PFAM: amylo-alpha-16-glucosidase; KEGG: mex:Mext_1625 amylo-alpha-16-glucosidase; amylo-alpha-16-glucosidase complement(1965230..1967566) Methylobacterium extorquens CM4 7116722 YP_002420699.1 CDS Mchl_1908 NC_011757.1 1967725 1968858 R PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1626 glycosyl transferase group 1; group 1 glycosyl transferase complement(1967725..1968858) Methylobacterium extorquens CM4 7116723 YP_002420700.1 CDS rpmI NC_011757.1 1969313 1969516 D PFAM: ribosomal protein L35; KEGG: mex:Mext_1627 50S ribosomal protein L35; 50S ribosomal protein L35 1969313..1969516 Methylobacterium extorquens CM4 7116724 YP_002420701.1 CDS rplT NC_011757.1 1969569 1969934 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1969569..1969934 Methylobacterium extorquens CM4 7116725 YP_002420702.1 CDS pheS NC_011757.1 1970118 1971197 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1970118..1971197 Methylobacterium extorquens CM4 7116726 YP_002420703.1 CDS Mchl_1912 NC_011757.1 1971262 1973814 D KEGG: mex:Mext_1630 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase subunit beta; phenylalanyl-tRNA synthetase subunit beta 1971262..1973814 Methylobacterium extorquens CM4 7116727 YP_002420704.1 CDS Mchl_1913 NC_011757.1 1973840 1974715 D PFAM: SEC-C motif domain protein; KEGG: mex:Mext_1631 SecC motif-containing protein; SEC-C motif domain-containing protein 1973840..1974715 Methylobacterium extorquens CM4 7116728 YP_002420705.1 CDS Mchl_1914 NC_011757.1 1974663 1975490 R PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: mex:Mext_1632 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein complement(1974663..1975490) Methylobacterium extorquens CM4 7116729 YP_002420706.1 CDS Mchl_1915 NC_011757.1 1975756 1976922 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 1975756..1976922 Methylobacterium extorquens CM4 7116730 YP_002420707.1 CDS truA NC_011757.1 1976977 1977729 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(1976977..1977729) Methylobacterium extorquens CM4 7116731 YP_002420708.1 CDS Mchl_1917 NC_011757.1 1977743 1978672 R TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: mex:Mext_1635 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(1977743..1978672) Methylobacterium extorquens CM4 7116732 YP_002420709.1 CDS Mchl_1918 NC_011757.1 1978683 1979198 R KEGG: mex:Mext_1636 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase complement(1978683..1979198) Methylobacterium extorquens CM4 7116733 YP_002420710.1 CDS Mchl_1919 NC_011757.1 1979477 1980757 R KEGG: mex:Mext_1637 hypothetical protein; hypothetical protein complement(1979477..1980757) Methylobacterium extorquens CM4 7116734 YP_002420711.1 CDS recR NC_011757.1 1980878 1981483 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(1980878..1981483) Methylobacterium extorquens CM4 7116735 YP_002420712.1 CDS Mchl_1921 NC_011757.1 1981811 1983430 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 1981811..1983430 Methylobacterium extorquens CM4 7116736 YP_002420713.1 CDS Mchl_1922 NC_011757.1 1983476 1984753 R TIGRFAM:radical SAM protein; PFAM: radical SAM domain protein; KEGG: mex:Mext_1640 radical SAM protein; radical SAM enzyme, Cfr family complement(1983476..1984753) Methylobacterium extorquens CM4 7116737 YP_002420714.1 CDS Mchl_1923 NC_011757.1 1984870 1986609 R PFAM: shikimate kinase; 3-dehydroquinate synthase; KEGG: mex:Mext_1641 shikimate kinase, 3-dehydroquinate synthase; shikimate kinase., 3-dehydroquinate synthase complement(1984870..1986609) Methylobacterium extorquens CM4 7116738 YP_002420715.1 CDS Mchl_1924 NC_011757.1 1986861 1987592 D PFAM: regulatory protein TetR; KEGG: mex:Mext_1642 regulatory protein TetR; TetR family transcriptional regulator 1986861..1987592 Methylobacterium extorquens CM4 7116739 YP_002420716.1 CDS Mchl_1925 NC_011757.1 1987943 1988905 D TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: lactate/malate dehydrogenase; KEGG: mex:Mext_1643 malate dehydrogenase, NAD-dependent; malate dehydrogenase, NAD-dependent 1987943..1988905 Methylobacterium extorquens CM4 7116740 YP_002420717.1 CDS Mchl_1926 NC_011757.1 1988983 1990179 D KEGG: mex:Mext_1644 succinyl-CoA synthetase, beta subunit; TIGRFAM: succinyl-CoA synthetase subunit beta; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; succinyl-CoA synthetase subunit beta 1988983..1990179 Methylobacterium extorquens CM4 7116741 YP_002420718.1 CDS Mchl_1927 NC_011757.1 1990188 1991075 D TIGRFAM: succinyl-CoA synthetase, subunit alpha; PFAM: CoA-binding protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: mex:Mext_1645 succinyl-CoA synthetase, subunit alpha; succinyl-CoA synthetase subunit alpha 1990188..1991075 Methylobacterium extorquens CM4 7116742 YP_002420719.1 CDS sucA NC_011757.1 1991300 1994290 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1991300..1994290 Methylobacterium extorquens CM4 7116743 YP_002420720.1 CDS Mchl_1929 NC_011757.1 1994374 1995702 D TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: mex:Mext_1647 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 1994374..1995702 Methylobacterium extorquens CM4 7116744 YP_002420721.1 CDS Mchl_1930 NC_011757.1 1995991 1997394 D Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1995991..1997394 Methylobacterium extorquens CM4 7116745 YP_002420722.1 CDS Mchl_1931 NC_011757.1 1997594 1999219 D KEGG: mex:Mext_1649 histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; histidine kinase 1997594..1999219 Methylobacterium extorquens CM4 7116746 YP_002420723.1 CDS Mchl_1932 NC_011757.1 1999279 1999899 D KEGG: mex:Mext_1650 hypothetical protein; hypothetical protein 1999279..1999899 Methylobacterium extorquens CM4 7116747 YP_002420724.1 CDS Mchl_1933 NC_011757.1 1999881 2000510 R PFAM: sarcosine oxidase subunit gamma; KEGG: mex:Mext_1651 sarcosine oxidase subunit gamma; sarcosine oxidase subunit gamma complement(1999881..2000510) Methylobacterium extorquens CM4 7116748 YP_002420725.1 CDS Mchl_1934 NC_011757.1 2000503 2003529 R TIGRFAM: sarcosine oxidase subunit alpha family; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: mex:Mext_1652 sarcosine oxidase subunit alpha family protein; sarcosine oxidase subunit alpha family complement(2000503..2003529) Methylobacterium extorquens CM4 7116749 YP_002420726.1 CDS Mchl_1935 NC_011757.1 2003526 2003813 R PFAM: sarcosine oxidase subunit delta heterotetrameric; KEGG: mex:Mext_1653 sarcosine oxidase subunit delta heterotetrameric; sarcosine oxidase subunit delta heterotetrameric complement(2003526..2003813) Methylobacterium extorquens CM4 7116750 YP_002420727.1 CDS Mchl_1936 NC_011757.1 2003931 2005181 R TIGRFAM: sarcosine oxidase subunit beta family; PFAM: FAD dependent oxidoreductase; KEGG: mex:Mext_1654 sarcosine oxidase subunit beta family protein; sarcosine oxidase subunit beta family complement(2003931..2005181) Methylobacterium extorquens CM4 7116751 YP_002420728.1 CDS Mchl_1937 NC_011757.1 2005382 2006377 D PFAM: ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_1655 ThiJ/PfpI domain-containing protein; AraC family transcriptional regulator 2005382..2006377 Methylobacterium extorquens CM4 7116752 YP_002420729.1 CDS Mchl_1938 NC_011757.1 2006857 2007792 D PFAM: glutamine amidotransferase class-II; KEGG: mex:Mext_1656 glutamine amidotransferase class-II; class II glutamine amidotransferase 2006857..2007792 Methylobacterium extorquens CM4 7116753 YP_002420730.1 CDS Mchl_1939 NC_011757.1 2007792 2008481 D PFAM: glutamate synthase subunit alpha domain protein; KEGG: mex:Mext_1657 glutamate synthase subunit alpha; glutamate synthase subunit alpha domain-containing protein 2007792..2008481 Methylobacterium extorquens CM4 7116754 YP_002420731.1 CDS Mchl_1940 NC_011757.1 2008481 2009824 D PFAM: ferredoxin-dependent glutamate synthase; KEGG: mex:Mext_1658 ferredoxin-dependent glutamate synthase; ferredoxin-dependent glutamate synthase 2008481..2009824 Methylobacterium extorquens CM4 7116755 YP_002420732.1 CDS Mchl_1941 NC_011757.1 2009914 2011212 D TIGRFAM: glutamine synthetaseII; PFAM: glutamine synthetase catalytic region; KEGG: mex:Mext_1659 glutamine synthetase, type III; glutamine synthetaseII 2009914..2011212 Methylobacterium extorquens CM4 7116756 YP_002420733.1 CDS Mchl_1942 NC_011757.1 2011400 2011906 D KEGG: mex:Mext_1660 hypothetical protein; hypothetical protein 2011400..2011906 Methylobacterium extorquens CM4 7116757 YP_002420734.1 CDS Mchl_1943 NC_011757.1 2012362 2012655 D KEGG: mpo:Mpop_0195 hypothetical protein; hypothetical protein 2012362..2012655 Methylobacterium extorquens CM4 7116759 YP_002420735.1 CDS Mchl_1944 NC_011757.1 2012853 2013158 R hypothetical protein complement(2012853..2013158) Methylobacterium extorquens CM4 7116760 YP_002420736.1 CDS Mchl_1945 NC_011757.1 2013328 2013522 R hypothetical protein complement(2013328..2013522) Methylobacterium extorquens CM4 7116761 YP_002420737.1 CDS Mchl_1946 NC_011757.1 2013515 2013883 R hypothetical protein complement(2013515..2013883) Methylobacterium extorquens CM4 7116762 YP_002420738.1 CDS Mchl_1947 NC_011757.1 2013886 2014266 R KEGG: mrd:Mrad2831_5308 hypothetical protein; hypothetical protein complement(2013886..2014266) Methylobacterium extorquens CM4 7116763 YP_002420739.1 CDS Mchl_1948 NC_011757.1 2014554 2015195 D KEGG: mrd:Mrad2831_2658 hypothetical protein; hypothetical protein 2014554..2015195 Methylobacterium extorquens CM4 7116764 YP_002420740.1 CDS Mchl_1949 NC_011757.1 2015338 2016729 R PFAM: protein of unknown function DUF1311; KEGG: bcm:Bcenmc03_7075 lipoprotein-like protein; hypothetical protein complement(2015338..2016729) Methylobacterium extorquens CM4 7116765 YP_002420741.1 CDS Mchl_1950 NC_011757.1 2016907 2017629 D PFAM: cell wall hydrolase/autolysin; KEGG: mag:amb4081 N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin 2016907..2017629 Methylobacterium extorquens CM4 7116766 YP_002420742.1 CDS Mchl_1953 NC_011757.1 2019313 2020449 D PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: cti:pRALTA_0502 transposase, IS110 family; transposase IS116/IS110/IS902 family protein 2019313..2020449 Methylobacterium extorquens CM4 7116769 YP_002420743.1 CDS Mchl_1961 NC_011757.1 2028070 2029578 R KEGG: bbt:BBta_5464 caspase domain-containing protein; hypothetical protein complement(2028070..2029578) Methylobacterium extorquens CM4 7116777 YP_002420744.1 CDS Mchl_1962 NC_011757.1 2029581 2030624 R KEGG: dsh:Dshi_0899 hypothetical protein; hypothetical protein complement(2029581..2030624) Methylobacterium extorquens CM4 7116778 YP_002420745.1 CDS Mchl_1963 NC_011757.1 2030631 2033219 R KEGG: mlo:mll9170 virulence factor SrfC-like protein; virulence factor SrfC-like protein complement(2030631..2033219) Methylobacterium extorquens CM4 7116779 YP_002420746.1 CDS Mchl_1964 NC_011757.1 2033242 2036370 R PFAM: virulence protein SrfB; KEGG: mlo:mll9171 virulence factor SrfB-like protein; virulence protein SrfB complement(2033242..2036370) Methylobacterium extorquens CM4 7116780 YP_002420747.1 CDS Mchl_1965 NC_011757.1 2036378 2037838 R KEGG: rde:RD1_1019 hypothetical protein; hypothetical protein complement(2036378..2037838) Methylobacterium extorquens CM4 7116781 YP_002420748.1 CDS Mchl_1966 NC_011757.1 2037851 2039587 R PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: dsh:Dshi_0895 peptidase S1 and S6 chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap complement(2037851..2039587) Methylobacterium extorquens CM4 7116782 YP_002420749.1 CDS Mchl_1967 NC_011757.1 2039939 2041219 R KEGG: nwi:Nwi_1274 peptidase C14, caspase catalytic subunit P20; hypothetical protein complement(2039939..2041219) Methylobacterium extorquens CM4 7116783 YP_002420750.1 CDS Mchl_1971 NC_011757.1 2043229 2044653 D hypothetical protein 2043229..2044653 Methylobacterium extorquens CM4 7116787 YP_002420751.1 CDS Mchl_1972 NC_011757.1 2044658 2045320 D PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: Animal peptidoglycan recognition protein PGRP; KEGG: aoe:Clos_0160 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; N-acetylmuramoyl-L-alanine amidase family 2 2044658..2045320 Methylobacterium extorquens CM4 7116788 YP_002420752.1 CDS Mchl_1973 NC_011757.1 2046403 2046642 D hypothetical protein 2046403..2046642 Methylobacterium extorquens CM4 7116789 YP_002420753.1 CDS Mchl_1974 NC_011757.1 2046753 2048210 R TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: mrd:Mrad2831_5167 P4 family phage/plasmid primase; hypothetical protein complement(2046753..2048210) Methylobacterium extorquens CM4 7116790 YP_002420754.1 CDS Mchl_1975 NC_011757.1 2048222 2048497 R hypothetical protein complement(2048222..2048497) Methylobacterium extorquens CM4 7116791 YP_002420755.1 CDS Mchl_1976 NC_011757.1 2048494 2048709 R KEGG: mrd:Mrad2831_5164 hypothetical protein; hypothetical protein complement(2048494..2048709) Methylobacterium extorquens CM4 7116792 YP_002420756.1 CDS Mchl_1977 NC_011757.1 2048905 2050428 R KEGG: mrd:Mrad2831_5192 hypothetical protein; hypothetical protein complement(2048905..2050428) Methylobacterium extorquens CM4 7116795 YP_002420757.1 CDS Mchl_1979 NC_011757.1 2051560 2062323 D PFAM: Hemolysin-type calcium-binding region; Animal haem peroxidase; KEGG: mex:Mext_1662 heme peroxidase; heme peroxidase 2051560..2062323 Methylobacterium extorquens CM4 7118679 YP_002420758.1 CDS Mchl_1980 NC_011757.1 2062384 2064150 D KEGG: mex:Mext_1663 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: ATPase AAA; type I secretion system ATPase 2062384..2064150 Methylobacterium extorquens CM4 7118680 YP_002420759.1 CDS Mchl_1981 NC_011757.1 2064147 2066351 D KEGG: mex:Mext_1664 hemolysin-type calcium-binding region; hemolysin-type calcium-binding region 2064147..2066351 Methylobacterium extorquens CM4 7118681 YP_002420760.1 CDS Mchl_1982 NC_011757.1 2066373 2067719 D TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD; KEGG: mex:Mext_1665 HlyD family type I secretion membrane fusion protein; HlyD family type I secretion membrane fusion protein 2066373..2067719 Methylobacterium extorquens CM4 7118682 YP_002420761.1 CDS Mchl_1983 NC_011757.1 2067891 2068430 D KEGG: mex:Mext_1666 hypothetical protein; transcriptional regulator 2067891..2068430 Methylobacterium extorquens CM4 7118683 YP_002420762.1 CDS Mchl_1984 NC_011757.1 2068480 2069601 D PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mex:Mext_1667 ATPase domain-containing protein; histidine kinase 2068480..2069601 Methylobacterium extorquens CM4 7118684 YP_002420763.1 CDS Mchl_1985 NC_011757.1 2069594 2070262 D PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mex:Mext_1668 response regulator receiver; LuxR family transcriptional regulator 2069594..2070262 Methylobacterium extorquens CM4 7118685 YP_002420764.1 CDS Mchl_1987 NC_011757.1 2070434 2071501 R KEGG: mex:Mext_1669 esterase/lipase-like protein; esterase/lipase-like protein complement(2070434..2071501) Methylobacterium extorquens CM4 7118687 YP_002420765.1 CDS Mchl_1988 NC_011757.1 2071601 2072410 R PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_1670 methyltransferase type 11; type 11 methyltransferase complement(2071601..2072410) Methylobacterium extorquens CM4 7118688 YP_002420766.1 CDS Mchl_1989 NC_011757.1 2073066 2078879 D PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1671 histidine kinase; GAF sensor hybrid histidine kinase 2073066..2078879 Methylobacterium extorquens CM4 7118689 YP_002420767.1 CDS Mchl_1990 NC_011757.1 2078876 2080963 D KEGG: mex:Mext_1672 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; SMART: PAC repeat-containing protein; multi-sensor hybrid histidine kinase 2078876..2080963 Methylobacterium extorquens CM4 7118690 YP_002420768.1 CDS Mchl_1991 NC_011757.1 2081234 2082106 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; TrkA-N domain protein; NmrA family protein; KEGG: mex:Mext_1673 NmrA family protein; NmrA family protein complement(2081234..2082106) Methylobacterium extorquens CM4 7118691 YP_002420769.1 CDS Mchl_1992 NC_011757.1 2082210 2083103 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1674 LysR substrate-binding; LysR family transcriptional regulator 2082210..2083103 Methylobacterium extorquens CM4 7118692 YP_002420770.1 CDS Mchl_1993 NC_011757.1 2083227 2084273 R PFAM: monooxygenase; KEGG: mex:Mext_1675 luciferase family protein; monooxygenase complement(2083227..2084273) Methylobacterium extorquens CM4 7118693 YP_002420771.1 CDS Mchl_1995 NC_011757.1 2084730 2085128 R PFAM: DoxX family protein; KEGG: mex:Mext_1676 DoxX family protein; DoxX family protein complement(2084730..2085128) Methylobacterium extorquens CM4 7118695 YP_002420772.1 CDS Mchl_1996 NC_011757.1 2085254 2086144 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1677 LysR substrate-binding; LysR family transcriptional regulator 2085254..2086144 Methylobacterium extorquens CM4 7118696 YP_002420773.1 CDS Mchl_1997 NC_011757.1 2086635 2087288 R PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1678 isochorismatase hydrolase; isochorismatase hydrolase complement(2086635..2087288) Methylobacterium extorquens CM4 7118697 YP_002420774.1 CDS Mchl_1998 NC_011757.1 2087391 2088347 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_1679 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein complement(2087391..2088347) Methylobacterium extorquens CM4 7118698 YP_002420775.1 CDS Mchl_1999 NC_011757.1 2088443 2089381 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1680 LysR substrate-binding; LysR family transcriptional regulator 2088443..2089381 Methylobacterium extorquens CM4 7118699 YP_002420776.1 CDS Mchl_2000 NC_011757.1 2089967 2090341 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_1681 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2089967..2090341) Methylobacterium extorquens CM4 7118700 YP_002420777.1 CDS Mchl_2001 NC_011757.1 2091050 2091844 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_1682 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 2091050..2091844 Methylobacterium extorquens CM4 7118701 YP_002420778.1 CDS Mchl_2002 NC_011757.1 2091907 2092785 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1683 LysR substrate-binding; LysR family transcriptional regulator 2091907..2092785 Methylobacterium extorquens CM4 7118702 YP_002420779.1 CDS Mchl_2003 NC_011757.1 2092869 2093165 D PFAM: antibiotic biosynthesis monooxygenase; KEGG: mex:Mext_1684 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 2092869..2093165 Methylobacterium extorquens CM4 7118703 YP_002420780.1 CDS Mchl_2004 NC_011757.1 2093238 2093663 R PFAM: cupin; KEGG: mex:Mext_1685 cupin 2 domain-containing protein; cupin complement(2093238..2093663) Methylobacterium extorquens CM4 7118704 YP_002420781.1 CDS Mchl_2006 NC_011757.1 2094116 2095132 R KEGG: mex:Mext_1687 zinc-binding alcohol dehydrogenase family protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; zinc-binding alcohol dehydrogenase family protein complement(2094116..2095132) Methylobacterium extorquens CM4 7118706 YP_002420782.1 CDS Mchl_2007 NC_011757.1 2095160 2096071 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_1688 hypothetical protein; hypothetical protein complement(2095160..2096071) Methylobacterium extorquens CM4 7118707 YP_002420783.1 CDS Mchl_2008 NC_011757.1 2096733 2098457 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_1689 diguanylate cyclase; diguanylate cyclase 2096733..2098457 Methylobacterium extorquens CM4 7118708 YP_002420784.1 CDS Mchl_2009 NC_011757.1 2099497 2104917 R TIGRFAM: autotransporter-associated beta strand repeat protein; PFAM: amidase; KEGG: mex:Mext_1690 beta strand repeat-containing protein; autotransporter-associated beta strand repeat-containing protein complement(2099497..2104917) Methylobacterium extorquens CM4 7118709 YP_002420785.1 CDS Mchl_2010 NC_011757.1 2105563 2106963 D TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: mex:Mext_1691 xanthine permease; xanthine permease 2105563..2106963 Methylobacterium extorquens CM4 7118710 YP_002420786.1 CDS Mchl_2011 NC_011757.1 2107090 2107497 R KEGG: mex:Mext_1692 hypothetical protein; hypothetical protein complement(2107090..2107497) Methylobacterium extorquens CM4 7118711 YP_002420787.1 CDS Mchl_2012 NC_011757.1 2107494 2108909 R catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase complement(2107494..2108909) Methylobacterium extorquens CM4 7118712 YP_002420788.1 CDS Mchl_2013 NC_011757.1 2108906 2109109 R KEGG: mex:Mext_1694 hypothetical protein; hypothetical protein complement(2108906..2109109) Methylobacterium extorquens CM4 7118713 YP_002420789.1 CDS Mchl_2014 NC_011757.1 2109212 2109892 R PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1695 isochorismatase hydrolase; isochorismatase hydrolase complement(2109212..2109892) Methylobacterium extorquens CM4 7118714 YP_002420790.1 CDS Mchl_2015 NC_011757.1 2110398 2111393 D KEGG: mex:Mext_1696 signal peptide; signal peptide 2110398..2111393 Methylobacterium extorquens CM4 7118715 YP_002420791.1 CDS Mchl_2016 NC_011757.1 2111419 2112783 D catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase 2111419..2112783 Methylobacterium extorquens CM4 7118716 YP_002420792.1 CDS Mchl_2017 NC_011757.1 2112783 2114387 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1698 ABC transporter; ABC transporter 2112783..2114387 Methylobacterium extorquens CM4 7118717 YP_002420793.1 CDS Mchl_2018 NC_011757.1 2114449 2115540 D PFAM: inner-membrane translocator; KEGG: mex:Mext_1699 inner-membrane translocator; inner-membrane translocator 2114449..2115540 Methylobacterium extorquens CM4 7118718 YP_002420794.1 CDS Mchl_2019 NC_011757.1 2115537 2116463 D PFAM: inner-membrane translocator; KEGG: mex:Mext_1700 inner-membrane translocator; inner-membrane translocator 2115537..2116463 Methylobacterium extorquens CM4 7118719 YP_002420795.1 CDS Mchl_2020 NC_011757.1 2116662 2117768 D PFAM: basic membrane lipoprotein; KEGG: mex:Mext_1701 basic membrane lipoprotein; basic membrane lipoprotein 2116662..2117768 Methylobacterium extorquens CM4 7118720 YP_002420796.1 CDS Mchl_2021 NC_011757.1 2117942 2119099 D PFAM: inner-membrane translocator; KEGG: mex:Mext_1702 inner-membrane translocator; inner-membrane translocator 2117942..2119099 Methylobacterium extorquens CM4 7118721 YP_002420797.1 CDS Mchl_2022 NC_011757.1 2119122 2120042 D PFAM: inner-membrane translocator; KEGG: mex:Mext_1703 inner-membrane translocator; inner-membrane translocator 2119122..2120042 Methylobacterium extorquens CM4 7118722 YP_002420798.1 CDS amiF NC_011757.1 2120052 2121080 D formamide amidohydrolase; catalyzes the hydrolysis of formamide to formate; formamidase 2120052..2121080 Methylobacterium extorquens CM4 7118723 YP_002420799.1 CDS Mchl_2024 NC_011757.1 2121077 2121796 D PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1705 isochorismatase hydrolase; isochorismatase hydrolase 2121077..2121796 Methylobacterium extorquens CM4 7118724 YP_002420800.1 CDS Mchl_2025 NC_011757.1 2121804 2123366 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1706 ABC transporter; ABC transporter 2121804..2123366 Methylobacterium extorquens CM4 7118725 YP_002420801.1 CDS Mchl_2026 NC_011757.1 2123682 2124494 R PFAM: protein of unknown function DUF81; KEGG: mex:Mext_1707 hypothetical protein; hypothetical protein complement(2123682..2124494) Methylobacterium extorquens CM4 7118726 YP_002420802.1 CDS Mchl_2027 NC_011757.1 2124622 2125902 D PFAM: basic membrane lipoprotein; KEGG: mex:Mext_1708 basic membrane lipoprotein; basic membrane lipoprotein 2124622..2125902 Methylobacterium extorquens CM4 7118727 YP_002420803.1 CDS Mchl_2028 NC_011757.1 2125979 2126260 R KEGG: mex:Mext_1709 hypothetical protein; hypothetical protein complement(2125979..2126260) Methylobacterium extorquens CM4 7118728 YP_002420804.1 CDS Mchl_2029 NC_011757.1 2126332 2126538 R KEGG: mex:Mext_1710 hypothetical protein; hypothetical protein complement(2126332..2126538) Methylobacterium extorquens CM4 7118729 YP_002420805.1 CDS Mchl_2030 NC_011757.1 2126627 2128270 R PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: mex:Mext_1711 peptidase S15; peptidase S15 complement(2126627..2128270) Methylobacterium extorquens CM4 7118730 YP_002420806.1 CDS Mchl_2031 NC_011757.1 2128260 2129078 R PFAM: creatininase; KEGG: mex:Mext_1712 creatininase; creatininase complement(2128260..2129078) Methylobacterium extorquens CM4 7118731 YP_002420807.1 CDS Mchl_2032 NC_011757.1 2129078 2130637 R PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_1713 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(2129078..2130637) Methylobacterium extorquens CM4 7118732 YP_002420808.1 CDS Mchl_2033 NC_011757.1 2130677 2131264 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mex:Mext_1714 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) complement(2130677..2131264) Methylobacterium extorquens CM4 7118733 YP_002420809.1 CDS Mchl_2034 NC_011757.1 2131261 2132649 R PFAM: FAD linked oxidase; KEGG: mex:Mext_1715 FAD linked oxidase domain-containing protein; FAD linked oxidase complement(2131261..2132649) Methylobacterium extorquens CM4 7118734 YP_002420810.1 CDS Mchl_2035 NC_011757.1 2132651 2133622 R PFAM: 2OG-Fe(II) oxygenase; KEGG: mex:Mext_1716 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase complement(2132651..2133622) Methylobacterium extorquens CM4 7118735 YP_002420811.1 CDS Mchl_2036 NC_011757.1 2133635 2134603 R PFAM: NMT1/THI5 like domain protein; KEGG: mex:Mext_1717 NMT1/THI5-like domain-containing protein; NMT1/THI5 like domain-containing protein complement(2133635..2134603) Methylobacterium extorquens CM4 7118736 YP_002420812.1 CDS Mchl_2037 NC_011757.1 2134603 2135676 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: mex:Mext_1718 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein complement(2134603..2135676) Methylobacterium extorquens CM4 7118737 YP_002420813.1 CDS Mchl_2038 NC_011757.1 2135743 2136537 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1719 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(2135743..2136537) Methylobacterium extorquens CM4 7118738 YP_002420814.1 CDS Mchl_2039 NC_011757.1 2136534 2137454 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1720 ABC transporter; ABC transporter complement(2136534..2137454) Methylobacterium extorquens CM4 7118739 YP_002420815.1 CDS Mchl_2040 NC_011757.1 2137463 2138449 R PFAM: NMT1/THI5 like domain protein; KEGG: mex:Mext_1721 NMT1/THI5-like domain-containing protein; NMT1/THI5 like domain-containing protein complement(2137463..2138449) Methylobacterium extorquens CM4 7118740 YP_002420816.1 CDS Mchl_2041 NC_011757.1 2138776 2139681 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1722 LysR substrate-binding; LysR family transcriptional regulator 2138776..2139681 Methylobacterium extorquens CM4 7118741 YP_002420817.1 CDS Mchl_2042 NC_011757.1 2139760 2141127 D Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase-like protein 2139760..2141127 Methylobacterium extorquens CM4 7118742 YP_002420818.1 CDS Mchl_2043 NC_011757.1 2141422 2141670 D KEGG: mex:Mext_1724 hypothetical protein; hypothetical protein 2141422..2141670 Methylobacterium extorquens CM4 7118743 YP_002420819.1 CDS Mchl_2044 NC_011757.1 2141939 2142169 D KEGG: mex:Mext_1725 hypothetical protein; hypothetical protein 2141939..2142169 Methylobacterium extorquens CM4 7118744 YP_002420820.1 CDS Mchl_2045 NC_011757.1 2142349 2143272 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1726 LysR substrate-binding; LysR family transcriptional regulator 2142349..2143272 Methylobacterium extorquens CM4 7118745 YP_002420821.1 CDS Mchl_2046 NC_011757.1 2143300 2144658 R TIGRFAM: guanine deaminase; PFAM: amidohydrolase; amidohydrolase; KEGG: mex:Mext_1727 guanine deaminase; guanine deaminase complement(2143300..2144658) Methylobacterium extorquens CM4 7118746 YP_002420822.1 CDS Mchl_2047 NC_011757.1 2144655 2147435 R PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_1728 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase complement(2144655..2147435) Methylobacterium extorquens CM4 7118747 YP_002420823.1 CDS Mchl_2048 NC_011757.1 2147432 2148247 R PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mex:Mext_1729 molybdopterin dehydrogenase FAD-binding; FAD-binding molybdopterin dehydrogenase complement(2147432..2148247) Methylobacterium extorquens CM4 7118748 YP_002420824.1 CDS Mchl_2049 NC_011757.1 2148572 2149576 R PFAM: NMT1/THI5 like domain protein; KEGG: mex:Mext_1730 NMT1/THI5-like domain-containing protein; NMT1/THI5 like domain-containing protein complement(2148572..2149576) Methylobacterium extorquens CM4 7118749 YP_002420825.1 CDS Mchl_2050 NC_011757.1 2149664 2150629 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1731 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(2149664..2150629) Methylobacterium extorquens CM4 7118750 YP_002420826.1 CDS Mchl_2051 NC_011757.1 2150626 2151543 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1732 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(2150626..2151543) Methylobacterium extorquens CM4 7118751 YP_002420827.1 CDS Mchl_2052 NC_011757.1 2151533 2152387 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1733 ABC transporter; ABC transporter complement(2151533..2152387) Methylobacterium extorquens CM4 7118752 YP_002420828.1 CDS Mchl_2053 NC_011757.1 2152586 2153191 R PFAM: flavin reductase domain protein FMN-binding; KEGG: mex:Mext_1734 flavin reductase domain-containing protein; flavin reductase domain-containing FMN-binding protein complement(2152586..2153191) Methylobacterium extorquens CM4 7118753 YP_002420829.1 CDS Mchl_2054 NC_011757.1 2153222 2154004 R PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_1735 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(2153222..2154004) Methylobacterium extorquens CM4 7118754 YP_002420830.1 CDS Mchl_2055 NC_011757.1 2154009 2154401 R PFAM: endoribonuclease L-PSP; KEGG: mex:Mext_1736 endoribonuclease L-PSP; endoribonuclease L-PSP complement(2154009..2154401) Methylobacterium extorquens CM4 7118755 YP_002420831.1 CDS Mchl_2056 NC_011757.1 2154414 2155160 R PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1737 isochorismatase hydrolase; isochorismatase hydrolase complement(2154414..2155160) Methylobacterium extorquens CM4 7118756 YP_002420832.1 CDS Mchl_2057 NC_011757.1 2155160 2156290 R PFAM: monooxygenase; KEGG: mex:Mext_1738 luciferase family protein; monooxygenase complement(2155160..2156290) Methylobacterium extorquens CM4 7118757 YP_002420833.1 CDS Mchl_2058 NC_011757.1 2156505 2157146 R PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: mex:Mext_1739 tetracycline transcriptional regulator YcdC domain-containing protein; TetR family transcriptional regulator complement(2156505..2157146) Methylobacterium extorquens CM4 7115839 YP_002420834.1 CDS Mchl_2059 NC_011757.1 2157274 2157771 R catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase complement(2157274..2157771) Methylobacterium extorquens CM4 7115843 YP_002420835.1 CDS Mchl_2060 NC_011757.1 2157768 2158607 R TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: mex:Mext_1741 hypothetical protein; hypothetical protein complement(2157768..2158607) Methylobacterium extorquens CM4 7115844 YP_002420836.1 CDS Mchl_2061 NC_011757.1 2158726 2159976 R PFAM: protein of unknown function DUF989; KEGG: mex:Mext_1742 hypothetical protein; hypothetical protein complement(2158726..2159976) Methylobacterium extorquens CM4 7115845 YP_002420837.1 CDS Mchl_2062 NC_011757.1 2160111 2161043 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1743 carbonate dehydratase; LysR family transcriptional regulator 2160111..2161043 Methylobacterium extorquens CM4 7115846 YP_002420838.1 CDS Mchl_2063 NC_011757.1 2161076 2162488 R KEGG: mex:Mext_1744 urate catabolism protein; TIGRFAM: OHCU decarboxylase; urate catabolism protein; PFAM: polysaccharide deacetylase; urate catabolism protein complement(2161076..2162488) Methylobacterium extorquens CM4 7115847 YP_002420839.1 CDS Mchl_2064 NC_011757.1 2162725 2163117 D TIGRFAM: hydroxyisourate hydrolase; PFAM: transthyretin; KEGG: mex:Mext_1745 hydroxyisourate hydrolase; hydroxyisourate hydrolase 2162725..2163117 Methylobacterium extorquens CM4 7115848 YP_002420840.1 CDS Mchl_2065 NC_011757.1 2163102 2163614 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mpo:Mpop_1232 (2Fe-2S)-binding domain protein; (2Fe-2S)-binding domain-containing protein complement(2163102..2163614) Methylobacterium extorquens CM4 7115849 YP_002420841.1 CDS Mchl_2066 NC_011757.1 2163611 2166799 R PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; molybdopterin dehydrogenase FAD-binding; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mpo:Mpop_1233 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase complement(2163611..2166799) Methylobacterium extorquens CM4 7115850 YP_002420842.1 CDS Mchl_2067 NC_011757.1 2166852 2167712 R KEGG: mpo:Mpop_1234 hypothetical protein; hypothetical protein complement(2166852..2167712) Methylobacterium extorquens CM4 7115851 YP_002420843.1 CDS Mchl_2068 NC_011757.1 2167726 2169108 R PFAM: amidohydrolase; amidohydrolase; KEGG: mpo:Mpop_1235 amidohydrolase; amidohydrolase complement(2167726..2169108) Methylobacterium extorquens CM4 7115852 YP_002420844.1 CDS Mchl_2069 NC_011757.1 2169116 2170672 R PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: mpo:Mpop_1236 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase complement(2169116..2170672) Methylobacterium extorquens CM4 7115853 YP_002420845.1 CDS Mchl_2070 NC_011757.1 2170779 2171420 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: mpo:Mpop_1237 thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate TPP binding domain-containing protein complement(2170779..2171420) Methylobacterium extorquens CM4 7115854 YP_002420846.1 CDS Mchl_2071 NC_011757.1 2171417 2171917 R KEGG: mpo:Mpop_1238 sulfopyruvate decarboxylase; sulfopyruvate decarboxylase complement(2171417..2171917) Methylobacterium extorquens CM4 7115855 YP_002420847.1 CDS Mchl_2072 NC_011757.1 2172027 2172944 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpo:Mpop_1239 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2172027..2172944) Methylobacterium extorquens CM4 7115856 YP_002420848.1 CDS Mchl_2073 NC_011757.1 2172963 2173604 R PFAM: glutathione S-transferase domain; KEGG: mpo:Mpop_1240 glutathione S-transferase domain; glutathione S-transferase domain-containing protein complement(2172963..2173604) Methylobacterium extorquens CM4 7115857 YP_002420849.1 CDS Mchl_2074 NC_011757.1 2173601 2174254 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: mpo:Mpop_1241 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein complement(2173601..2174254) Methylobacterium extorquens CM4 7115858 YP_002420850.1 CDS Mchl_2075 NC_011757.1 2174247 2174528 R KEGG: mpo:Mpop_1242 hypothetical protein; hypothetical protein complement(2174247..2174528) Methylobacterium extorquens CM4 7115859 YP_002420851.1 CDS Mchl_2076 NC_011757.1 2174889 2176004 D PFAM: basic membrane lipoprotein; KEGG: mpo:Mpop_1243 basic membrane lipoprotein; basic membrane lipoprotein 2174889..2176004 Methylobacterium extorquens CM4 7115860 YP_002420852.1 CDS Mchl_2077 NC_011757.1 2176004 2177593 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mpo:Mpop_1244 ABC transporter; ABC transporter 2176004..2177593 Methylobacterium extorquens CM4 7115861 YP_002420853.1 CDS Mchl_2078 NC_011757.1 2177590 2178642 D PFAM: inner-membrane translocator; KEGG: mpo:Mpop_1245 inner-membrane translocator; inner-membrane translocator 2177590..2178642 Methylobacterium extorquens CM4 7115862 YP_002420854.1 CDS Mchl_2079 NC_011757.1 2178669 2179604 D PFAM: inner-membrane translocator; KEGG: mpo:Mpop_1246 inner-membrane translocator; inner-membrane translocator 2178669..2179604 Methylobacterium extorquens CM4 7115863 YP_002420855.1 CDS Mchl_2080 NC_011757.1 2179619 2181013 D PFAM: amidohydrolase; amidohydrolase; KEGG: mpo:Mpop_1247 amidohydrolase; amidohydrolase 2179619..2181013 Methylobacterium extorquens CM4 7115864 YP_002420856.1 CDS Mchl_2081 NC_011757.1 2181059 2181895 D KEGG: mpo:Mpop_1248 hypothetical protein; hypothetical protein 2181059..2181895 Methylobacterium extorquens CM4 7115865 YP_002420857.1 CDS Mchl_2082 NC_011757.1 2182377 2183369 D PFAM: protein of unknown function DUF808; KEGG: mex:Mext_1746 hypothetical protein; hypothetical protein 2182377..2183369 Methylobacterium extorquens CM4 7115866 YP_002420858.1 CDS Mchl_2083 NC_011757.1 2183618 2184748 D PFAM: EAL domain protein; KEGG: mex:Mext_1747 EAL domain-containing protein; diguanylate phosphodiesterase 2183618..2184748 Methylobacterium extorquens CM4 7115867 YP_002420859.1 CDS Mchl_2084 NC_011757.1 2184764 2186017 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_1748 diguanylate cyclase; diguanylate cyclase 2184764..2186017 Methylobacterium extorquens CM4 7115868 YP_002420860.1 CDS Mchl_2085 NC_011757.1 2186244 2186924 D PFAM: OmpW family protein; KEGG: mex:Mext_1749 OmpW family protein; OmpW family protein 2186244..2186924 Methylobacterium extorquens CM4 7115869 YP_002420861.1 CDS Mchl_2086 NC_011757.1 2187202 2187564 R KEGG: mex:Mext_1750 hypothetical protein; hypothetical protein complement(2187202..2187564) Methylobacterium extorquens CM4 7115870 YP_002420862.1 CDS Mchl_2087 NC_011757.1 2187706 2187897 D KEGG: mex:Mext_1751 hypothetical protein; hypothetical protein 2187706..2187897 Methylobacterium extorquens CM4 7115871 YP_002420863.1 CDS Mchl_2088 NC_011757.1 2188308 2188604 D KEGG: mex:Mext_1752 hypothetical protein; hypothetical protein 2188308..2188604 Methylobacterium extorquens CM4 7115872 YP_002420864.1 CDS Mchl_2089 NC_011757.1 2188855 2189136 D KEGG: mex:Mext_1753 hypothetical protein; hypothetical protein 2188855..2189136 Methylobacterium extorquens CM4 7115873 YP_002420865.1 CDS Mchl_2090 NC_011757.1 2189281 2191101 D KEGG: mex:Mext_1754 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 2189281..2191101 Methylobacterium extorquens CM4 7115874 YP_002420866.1 CDS Mchl_2091 NC_011757.1 2191098 2192024 R PFAM: aminoglycoside phosphotransferase; KEGG: mex:Mext_1755 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(2191098..2192024) Methylobacterium extorquens CM4 7115875 YP_002420867.1 CDS Mchl_2092 NC_011757.1 2192455 2193246 D PFAM: phospholipid/glycerol acyltransferase; KEGG: mex:Mext_1756 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 2192455..2193246 Methylobacterium extorquens CM4 7115876 YP_002420868.1 CDS Mchl_2093 NC_011757.1 2193336 2193620 D PFAM: protein of unknown function DUF497; KEGG: mex:Mext_1757 hypothetical protein; hypothetical protein 2193336..2193620 Methylobacterium extorquens CM4 7115877 YP_002420869.1 CDS Mchl_2094 NC_011757.1 2193574 2193903 D KEGG: mex:Mext_1758 hypothetical protein; hypothetical protein 2193574..2193903 Methylobacterium extorquens CM4 7115878 YP_002420870.1 CDS Mchl_2095 NC_011757.1 2193961 2194650 R TIGRFAM: methionine biosynthesis protein MetW; PFAM: methionine biosynthesis MetW protein; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_1759 methionine biosynthesis protein MetW; methionine biosynthesis protein MetW complement(2193961..2194650) Methylobacterium extorquens CM4 7115879 YP_002420871.1 CDS Mchl_2096 NC_011757.1 2194657 2195874 R KEGG: mex:Mext_1760 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; homoserine O-acetyltransferase complement(2194657..2195874) Methylobacterium extorquens CM4 7115880 YP_002420872.1 CDS Mchl_2097 NC_011757.1 2196279 2196782 D TIGRFAM: methionine-R-sulfoxide reductase; PFAM: methionine sulfoxide reductase B; KEGG: mex:Mext_1761 methionine-R-sulfoxide reductase; methionine-R-sulfoxide reductase 2196279..2196782 Methylobacterium extorquens CM4 7115881 YP_002420873.1 CDS Mchl_2098 NC_011757.1 2196874 2197596 D TIGRFAM: peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A; KEGG: mex:Mext_1762 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase 2196874..2197596 Methylobacterium extorquens CM4 7115882 YP_002420874.1 CDS Mchl_2099 NC_011757.1 2197642 2198139 R TIGRFAM: bacterioferritin; PFAM: rubrerythrin; Ferritin Dps family protein; KEGG: mex:Mext_1763 bacterioferritin; bacterioferritin complement(2197642..2198139) Methylobacterium extorquens CM4 7115883 YP_002420875.1 CDS Mchl_2100 NC_011757.1 2198180 2198470 R PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mex:Mext_1764 hypothetical protein; BFD domain-containing protein (2Fe-2S)-binding domain-containing protein complement(2198180..2198470) Methylobacterium extorquens CM4 7115884 YP_002420876.1 CDS Mchl_2101 NC_011757.1 2198812 2199675 R PFAM: UspA domain protein; KEGG: mex:Mext_1765 UspA domain-containing protein; UspA domain-containing protein complement(2198812..2199675) Methylobacterium extorquens CM4 7115885 YP_002420877.1 CDS Mchl_2102 NC_011757.1 2199789 2200937 R PFAM: acyltransferase 3; KEGG: mex:Mext_1766 acyltransferase 3; acyltransferase 3 complement(2199789..2200937) Methylobacterium extorquens CM4 7115886 YP_002420878.1 CDS Mchl_2103 NC_011757.1 2201060 2201770 D KEGG: mex:Mext_1767 hypothetical protein; hypothetical protein 2201060..2201770 Methylobacterium extorquens CM4 7115887 YP_002420879.1 CDS Mchl_2104 NC_011757.1 2202031 2203173 R PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_1768 radical SAM domain-containing protein; radical SAM protein complement(2202031..2203173) Methylobacterium extorquens CM4 7115888 YP_002420880.1 CDS Mchl_2105 NC_011757.1 2203335 2203856 D KEGG: mex:Mext_1769 hypothetical protein; hypothetical protein 2203335..2203856 Methylobacterium extorquens CM4 7115889 YP_002420881.1 CDS Mchl_2106 NC_011757.1 2203931 2204113 R KEGG: mex:Mext_1770 hypothetical protein; hypothetical protein complement(2203931..2204113) Methylobacterium extorquens CM4 7115890 YP_002420882.1 CDS rpmG NC_011757.1 2204356 2204523 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(2204356..2204523) Methylobacterium extorquens CM4 7115891 YP_002420883.1 CDS panB NC_011757.1 2204677 2205501 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(2204677..2205501) Methylobacterium extorquens CM4 7115892 YP_002420884.1 CDS Mchl_2109 NC_011757.1 2205928 2206323 R PFAM: thioredoxin domain; KEGG: mex:Mext_1773 thioredoxin domain-containing protein; thioredoxin domain complement(2205928..2206323) Methylobacterium extorquens CM4 7115893 YP_002420885.1 CDS Mchl_2110 NC_011757.1 2206354 2206941 R KEGG: mex:Mext_1774 rhodanese; rhodanese complement(2206354..2206941) Methylobacterium extorquens CM4 7115894 YP_002420886.1 CDS Mchl_2111 NC_011757.1 2206959 2207774 R PFAM: Sulphur oxidation protein SoxZ; KEGG: mex:Mext_1775 sulphur oxidation protein SoxZ; sulfur oxidation protein SoxZ complement(2206959..2207774) Methylobacterium extorquens CM4 7115895 YP_002420887.1 CDS Mchl_2112 NC_011757.1 2207816 2208748 R PFAM: beta-lactamase; KEGG: mex:Mext_1776 beta-lactamase domain-containing protein; beta-lactamase complement(2207816..2208748) Methylobacterium extorquens CM4 7115896 YP_002420888.1 CDS Mchl_2113 NC_011757.1 2208934 2209518 D PFAM: regulatory protein TetR; KEGG: mex:Mext_1777 regulatory protein TetR; TetR family transcriptional regulator 2208934..2209518 Methylobacterium extorquens CM4 7115897 YP_002420889.1 CDS Mchl_2114 NC_011757.1 2209618 2210604 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_1778 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K 2209618..2210604 Methylobacterium extorquens CM4 7115898 YP_002420890.1 CDS Mchl_2115 NC_011757.1 2210832 2210933 R hypothetical protein complement(2210832..2210933) Methylobacterium extorquens CM4 7115899 YP_002420891.1 CDS Mchl_2116 NC_011757.1 2211057 2211308 R KEGG: mex:Mext_1780 hypothetical protein; hypothetical protein complement(2211057..2211308) Methylobacterium extorquens CM4 7115900 YP_002420892.1 CDS Mchl_2117 NC_011757.1 2211886 2213322 D KEGG: mex:Mext_1781 hypothetical protein; hypothetical protein 2211886..2213322 Methylobacterium extorquens CM4 7115901 YP_002420893.1 CDS Mchl_2118 NC_011757.1 2213319 2216696 D KEGG: mex:Mext_1782 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 2213319..2216696 Methylobacterium extorquens CM4 7115902 YP_002420894.1 CDS Mchl_2119 NC_011757.1 2216797 2218245 D PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: mex:Mext_1783 protein of unknown function DUF463 YcjX family protein; hypothetical protein 2216797..2218245 Methylobacterium extorquens CM4 7115903 YP_002420895.1 CDS Mchl_2120 NC_011757.1 2218242 2219264 D PFAM: conserved hypothetical protein; KEGG: mex:Mext_1784 hypothetical protein; hypothetical protein 2218242..2219264 Methylobacterium extorquens CM4 7115904 YP_002420896.1 CDS Mchl_2121 NC_011757.1 2219383 2219769 R KEGG: mex:Mext_1785 hypothetical protein; hypothetical protein complement(2219383..2219769) Methylobacterium extorquens CM4 7115905 YP_002420897.1 CDS Mchl_2122 NC_011757.1 2219978 2220529 R PFAM: protein of unknown function DUF1234; KEGG: mex:Mext_1786 hypothetical protein; hypothetical protein complement(2219978..2220529) Methylobacterium extorquens CM4 7115906 YP_002420898.1 CDS Mchl_2123 NC_011757.1 2220600 2221868 R TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mex:Mext_1787 diaminopimelate decarboxylase; diaminopimelate decarboxylase complement(2220600..2221868) Methylobacterium extorquens CM4 7115907 YP_002420899.1 CDS Mchl_2124 NC_011757.1 2222068 2222418 R KEGG: mex:Mext_1788 hypothetical protein; hypothetical protein complement(2222068..2222418) Methylobacterium extorquens CM4 7115908 YP_002420900.1 CDS Mchl_2125 NC_011757.1 2222571 2222849 R KEGG: mex:Mext_1789 hypothetical protein; hypothetical protein complement(2222571..2222849) Methylobacterium extorquens CM4 7115909 YP_002420901.1 CDS Mchl_2126 NC_011757.1 2223040 2223762 R KEGG: mex:Mext_1790 hypothetical protein; hypothetical protein complement(2223040..2223762) Methylobacterium extorquens CM4 7115910 YP_002420902.1 CDS Mchl_2127 NC_011757.1 2223987 2224604 R PFAM: conserved hypothetical protein; KEGG: mex:Mext_1791 hypothetical protein; hypothetical protein complement(2223987..2224604) Methylobacterium extorquens CM4 7115911 YP_002420903.1 CDS Mchl_2128 NC_011757.1 2224959 2225609 R PFAM: ribonuclease HII/HIII; KEGG: mex:Mext_1792 ribonuclease H; ribonuclease H complement(2224959..2225609) Methylobacterium extorquens CM4 7115912 YP_002420904.1 CDS Mchl_2129 NC_011757.1 2225737 2226813 R PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1793 glycosyl transferase group 1; group 1 glycosyl transferase complement(2225737..2226813) Methylobacterium extorquens CM4 7115913 YP_002420905.1 CDS Mchl_2130 NC_011757.1 2226934 2227746 R PFAM: metallophosphoesterase; KEGG: mex:Mext_1794 metallophosphoesterase; metallophosphoesterase complement(2226934..2227746) Methylobacterium extorquens CM4 7115914 YP_002420906.1 CDS Mchl_2131 NC_011757.1 2228409 2229617 D PFAM: aminotransferase class V; KEGG: mex:Mext_1795 serine--glyoxylate transaminase; class V aminotransferase 2228409..2229617 Methylobacterium extorquens CM4 7115915 YP_002420907.1 CDS Mchl_2132 NC_011757.1 2229898 2230842 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_1796 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 2229898..2230842 Methylobacterium extorquens CM4 7115916 YP_002420908.1 CDS Mchl_2133 NC_011757.1 2230986 2231852 D PFAM: methylene-tetrahydromethanopterin dehydrogenase; KEGG: mex:Mext_1797 methylenetetrahydrofolate dehydrogenase (NADP(+)); methylenetetrahydrofolate dehydrogenase (NADP(+)) 2230986..2231852 Methylobacterium extorquens CM4 7115917 YP_002420909.1 CDS Mchl_2134 NC_011757.1 2231946 2232572 D PFAM: formiminotransferase-cyclodeaminase; KEGG: mex:Mext_1798 formiminotransferase-cyclodeaminase; formiminotransferase-cyclodeaminase 2231946..2232572 Methylobacterium extorquens CM4 7115918 YP_002420910.1 CDS Mchl_2135 NC_011757.1 2233122 2234294 D catalyzes the formation of malyl-CoA from malate and CoA; malate--CoA ligase subunit beta 2233122..2234294 Methylobacterium extorquens CM4 7115919 YP_002420911.1 CDS Mchl_2136 NC_011757.1 2234317 2235207 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 2234317..2235207 Methylobacterium extorquens CM4 7115920 YP_002420912.1 CDS Mchl_2137 NC_011757.1 2235492 2238260 D PFAM: phosphoenolpyruvate carboxylase; KEGG: mex:Mext_1801 phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 2235492..2238260 Methylobacterium extorquens CM4 7115921 YP_002420913.1 CDS Mchl_2138 NC_011757.1 2238448 2239422 D PFAM: HpcH/HpaI aldolase; KEGG: mex:Mext_1802 citrate (pro-3S)-lyase; citrate (pro-3S)-lyase 2238448..2239422 Methylobacterium extorquens CM4 7115922 YP_002420914.1 CDS Mchl_2139 NC_011757.1 2239493 2240059 R PFAM: protein of unknown function DUF1003; KEGG: mex:Mext_1803 hypothetical protein; hypothetical protein complement(2239493..2240059) Methylobacterium extorquens CM4 7115923 YP_002420915.1 CDS Mchl_2140 NC_011757.1 2240355 2241230 D PFAM: dienelactone hydrolase; KEGG: mex:Mext_1804 carboxymethylenebutenolidase; carboxymethylenebutenolidase 2240355..2241230 Methylobacterium extorquens CM4 7116005 YP_002420916.1 CDS Mchl_2141 NC_011757.1 2241238 2241615 R PFAM: transcriptional coactivator/pterin dehydratase; KEGG: mpo:Mpop_1757 transcriptional coactivator/pterin dehydratase; transcriptional coactivator/pterin dehydratase complement(2241238..2241615) Methylobacterium extorquens CM4 7116087 YP_002420917.1 CDS Mchl_2142 NC_011757.1 2241842 2242837 D KEGG: mex:Mext_1806 ABC transporter periplasmic solute-binding protein; ABC transporter periplasmic protein 2241842..2242837 Methylobacterium extorquens CM4 7116088 YP_002420918.1 CDS Mchl_2143 NC_011757.1 2242877 2243611 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_1807 binding-protein-dependent transport systems inner membrane component; ABC transporter inner membrane protein 2242877..2243611 Methylobacterium extorquens CM4 7116089 YP_002420919.1 CDS Mchl_2144 NC_011757.1 2243592 2244365 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1808 ABC transporter; ABC transporter 2243592..2244365 Methylobacterium extorquens CM4 7116090 YP_002420920.1 CDS Mchl_2145 NC_011757.1 2245072 2246877 D TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: pyrrolo-quinoline quinone; KEGG: mex:Mext_1809 methanol/ethanol family PQQ-dependent dehydrogenase; methanol/ethanol family PQQ-dependent dehydrogenase 2245072..2246877 Methylobacterium extorquens CM4 7116091 YP_002420921.1 CDS Mchl_2146 NC_011757.1 2247023 2247622 D KEGG: mex:Mext_1810 hypothetical protein; hypothetical protein 2247023..2247622 Methylobacterium extorquens CM4 7116092 YP_002420922.1 CDS Mchl_2147 NC_011757.1 2247622 2248476 D PFAM: extracellular solute-binding protein family 3; KEGG: mex:Mext_1811 extracellular solute-binding protein; family 3 extracellular solute-binding protein 2247622..2248476 Methylobacterium extorquens CM4 7116093 YP_002420923.1 CDS Mchl_2148 NC_011757.1 2248582 2249058 R KEGG: mex:Mext_1812 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(2248582..2249058) Methylobacterium extorquens CM4 7116094 YP_002420924.1 CDS Mchl_2149 NC_011757.1 2249055 2249447 R TIGRFAM: dihydroneopterin aldolase; KEGG: mex:Mext_1813 dihydroneopterin aldolase; dihydroneopterin aldolase complement(2249055..2249447) Methylobacterium extorquens CM4 7116095 YP_002420925.1 CDS Mchl_2150 NC_011757.1 2249440 2250309 R KEGG: mex:Mext_1814 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase complement(2249440..2250309) Methylobacterium extorquens CM4 7116096 YP_002420926.1 CDS Mchl_2151 NC_011757.1 2250404 2250769 R KEGG: mpo:Mpop_1767 hypothetical protein; hypothetical protein complement(2250404..2250769) Methylobacterium extorquens CM4 7116097 YP_002420927.1 CDS Mchl_2152 NC_011757.1 2250750 2251484 R KEGG: mex:Mext_1816 hypothetical protein; hypothetical protein complement(2250750..2251484) Methylobacterium extorquens CM4 7116098 YP_002420928.1 CDS Mchl_2153 NC_011757.1 2251481 2252635 R TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: radical SAM protein; KEGG: mex:Mext_1817 pyrroloquinoline quinone biosynthesis protein PqqE; pyrroloquinoline quinone biosynthesis protein PqqE complement(2251481..2252635) Methylobacterium extorquens CM4 7116099 YP_002420929.1 CDS Mchl_2154 NC_011757.1 2252632 2253750 R Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC complement(2252632..2253750) Methylobacterium extorquens CM4 7116100 YP_002420930.1 CDS Mchl_2155 NC_011757.1 2253917 2254816 R possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB complement(2253917..2254816) Methylobacterium extorquens CM4 7116101 YP_002420931.1 CDS Mchl_2156 NC_011757.1 2255289 2255996 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_1821 response regulator receiver; transcriptional regulator complement(2255289..2255996) Methylobacterium extorquens CM4 7116102 YP_002420932.1 CDS Mchl_2157 NC_011757.1 2255993 2257630 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1822 ATPase domain-containing protein; histidine kinase complement(2255993..2257630) Methylobacterium extorquens CM4 7116103 YP_002420933.1 CDS Mchl_2158 NC_011757.1 2257739 2257945 R KEGG: mex:Mext_1823 hypothetical protein; hypothetical protein complement(2257739..2257945) Methylobacterium extorquens CM4 7116104 YP_002420934.1 CDS Mchl_2159 NC_011757.1 2258093 2258890 R TIGRFAM: formylmethanofuran dehydrogenase subunit C; PFAM: glutamate synthase subunit alpha domain protein; KEGG: mex:Mext_1824 formylmethanofuran dehydrogenase subunit C; formylmethanofuran dehydrogenase subunit C complement(2258093..2258890) Methylobacterium extorquens CM4 7116105 YP_002420935.1 CDS Mchl_2160 NC_011757.1 2258887 2259822 R catalyzes the transfer of a formyl group from formylmethanofuran to tetrahydromethanopterin tetrahydromethanopterin; formylmethanofuran--tetrahydromethanopterin formyltransferase complement(2258887..2259822) Methylobacterium extorquens CM4 7116106 YP_002420936.1 CDS Mchl_2161 NC_011757.1 2259848 2261494 R TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: amidohydrolase; KEGG: mex:Mext_1826 formylmethanofuran dehydrogenase subunit A; formylmethanofuran dehydrogenase subunit A complement(2259848..2261494) Methylobacterium extorquens CM4 7116107 YP_002420937.1 CDS Mchl_2162 NC_011757.1 2261488 2262576 R KEGG: mex:Mext_1827 tungsten-containing formylmethanofuran dehydrogenase, subunit B; tungsten-containing formylmethanofuran dehydrogenase subunit B complement(2261488..2262576) Methylobacterium extorquens CM4 7116108 YP_002420938.1 CDS Mchl_2163 NC_011757.1 2262981 2264003 D TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: mex:Mext_1828 beta-ribofuranosylaminobenzene 5'-phosphate synthase; beta-ribofuranosylaminobenzene 5'-phosphate synthase family 2262981..2264003 Methylobacterium extorquens CM4 7116109 YP_002420939.1 CDS Mchl_2164 NC_011757.1 2264114 2265007 D PFAM: methylene-tetrahydromethanopterin dehydrogenase; KEGG: mex:Mext_1829 methylene-tetrahydromethanopterin dehydrogenase; methylene-tetrahydromethanopterin dehydrogenase 2264114..2265007 Methylobacterium extorquens CM4 7116110 YP_002420940.1 CDS Mchl_2165 NC_011757.1 2265004 2266242 D PFAM: protein of unknown function DUF201; KEGG: mex:Mext_1830 hypothetical protein; hypothetical protein 2265004..2266242 Methylobacterium extorquens CM4 7116111 YP_002420941.1 CDS Mchl_2166 NC_011757.1 2266172 2267143 D catalyzes the reversible formation of methenyl-H(4)methanopterin from N(5)-formyl-H(4)methanopterin; N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase 2266172..2267143 Methylobacterium extorquens CM4 7116112 YP_002420942.1 CDS Mchl_2167 NC_011757.1 2267421 2268335 D TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: mex:Mext_1832 alpha-L-glutamate ligase; alpha-L-glutamate ligase, RimK family 2267421..2268335 Methylobacterium extorquens CM4 7116113 YP_002420943.1 CDS Mchl_2168 NC_011757.1 2268332 2269201 D PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: mex:Mext_1833 triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA protein 2268332..2269201 Methylobacterium extorquens CM4 7116114 YP_002420944.1 CDS Mchl_2169 NC_011757.1 2269459 2269971 D TIGRFAM: formaldehyde-activating enzyme; PFAM: formaldehyde-activating enzyme (Fae); KEGG: mex:Mext_1834 formaldehyde-activating enzyme; formaldehyde-activating enzyme 2269459..2269971 Methylobacterium extorquens CM4 7116115 YP_002420945.1 CDS Mchl_2170 NC_011757.1 2270111 2270806 R PFAM: histidine biosynthesis protein; KEGG: mex:Mext_1835 histidine biosynthesis protein; histidine biosynthesis protein complement(2270111..2270806) Methylobacterium extorquens CM4 7116116 YP_002420946.1 CDS Mchl_2171 NC_011757.1 2270810 2271844 D TIGRFAM: H4MPT-linked C1 transfer pathway protein; PFAM: hydantoinase/oxoprolinase; KEGG: mex:Mext_1836 H4MPT-linked C1 transfer pathway protein; H4MPT-linked C1 transfer pathway protein 2270810..2271844 Methylobacterium extorquens CM4 7116117 YP_002420947.1 CDS Mchl_2172 NC_011757.1 2271897 2272097 D KEGG: mex:Mext_1837 hypothetical protein; hypothetical protein 2271897..2272097 Methylobacterium extorquens CM4 7116118 YP_002420948.1 CDS Mchl_2173 NC_011757.1 2272100 2273200 R TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein; KEGG: mex:Mext_1838 YVTN beta-propeller repeat-containing protein; 40-residue YVTN family beta-propeller repeat-containing protein complement(2272100..2273200) Methylobacterium extorquens CM4 7116119 YP_002420949.1 CDS Mchl_2174 NC_011757.1 2273226 2273756 R KEGG: mex:Mext_1839 signal peptide; signal peptide complement(2273226..2273756) Methylobacterium extorquens CM4 7116120 YP_002420950.1 CDS Mchl_2175 NC_011757.1 2273823 2274356 R KEGG: mex:Mext_1840 hypothetical protein; hypothetical protein complement(2273823..2274356) Methylobacterium extorquens CM4 7116121 YP_002420951.1 CDS Mchl_2176 NC_011757.1 2274398 2274994 R PFAM: protein of unknown function DUF447; KEGG: mex:Mext_1841 hypothetical protein; hypothetical protein complement(2274398..2274994) Methylobacterium extorquens CM4 7116122 YP_002420952.1 CDS Mchl_2177 NC_011757.1 2275052 2276626 R PFAM: dihydropteroate synthase DHPS; KEGG: mex:Mext_1842 dihydropteroate synthase DhpS; dihydropteroate synthase DHPS complement(2275052..2276626) Methylobacterium extorquens CM4 7116123 YP_002420953.1 CDS Mchl_2178 NC_011757.1 2276623 2277237 R PFAM: aspartate/glutamate/uridylate kinase; KEGG: mex:Mext_1843 aspartate/glutamate/uridylate kinase; aspartate/glutamate/uridylate kinase complement(2276623..2277237) Methylobacterium extorquens CM4 7116124 YP_002420954.1 CDS Mchl_2179 NC_011757.1 2277243 2277953 R PFAM: protein of unknown function DUF556; KEGG: mex:Mext_1844 hypothetical protein; hypothetical protein complement(2277243..2277953) Methylobacterium extorquens CM4 7116125 YP_002420955.1 CDS Mchl_2180 NC_011757.1 2277999 2278532 R KEGG: mex:Mext_1845 hypothetical protein; hypothetical protein complement(2277999..2278532) Methylobacterium extorquens CM4 7116126 YP_002420956.1 CDS Mchl_2181 NC_011757.1 2278765 2280033 D KEGG: mex:Mext_1846 hypothetical protein; hypothetical protein 2278765..2280033 Methylobacterium extorquens CM4 7116127 YP_002420957.1 CDS Mchl_2182 NC_011757.1 2280200 2281186 D TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mex:Mext_1847 YVTN beta-propeller repeat-containing protein; 40-residue YVTN family beta-propeller repeat-containing protein 2280200..2281186 Methylobacterium extorquens CM4 7116128 YP_002420958.1 CDS Mchl_2183 NC_011757.1 2281279 2281713 D KEGG: mex:Mext_1848 hypothetical protein; hypothetical protein 2281279..2281713 Methylobacterium extorquens CM4 7116129 YP_002420959.1 CDS Mchl_2184 NC_011757.1 2281726 2282004 D KEGG: mex:Mext_1849 hypothetical protein; hypothetical protein 2281726..2282004 Methylobacterium extorquens CM4 7116130 YP_002420960.1 CDS Mchl_2185 NC_011757.1 2282001 2282750 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1850 ABC transporter; ABC transporter 2282001..2282750 Methylobacterium extorquens CM4 7116131 YP_002420961.1 CDS Mchl_2186 NC_011757.1 2282747 2283640 D PFAM: ABC transporter; KEGG: mex:Mext_1851 ABC-2 type transporter; ABC transporter 2282747..2283640 Methylobacterium extorquens CM4 7116132 YP_002420962.1 CDS Mchl_2187 NC_011757.1 2283651 2284280 D KEGG: mex:Mext_1852 hypothetical protein; hypothetical protein 2283651..2284280 Methylobacterium extorquens CM4 7116133 YP_002420963.1 CDS Mchl_2188 NC_011757.1 2284817 2287342 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1853 TonB-dependent receptor; TonB-dependent receptor 2284817..2287342 Methylobacterium extorquens CM4 7116134 YP_002420964.1 CDS Mchl_2189 NC_011757.1 2287660 2288061 D KEGG: mex:Mext_1854 hypothetical protein; signal transduction protein with EFhand domain 2287660..2288061 Methylobacterium extorquens CM4 7116135 YP_002420965.1 CDS Mchl_2190 NC_011757.1 2288264 2288623 D KEGG: mex:Mext_1855 hypothetical protein; hypothetical protein 2288264..2288623 Methylobacterium extorquens CM4 7116136 YP_002420966.1 CDS Mchl_2191 NC_011757.1 2288727 2290283 R KEGG: mex:Mext_1856 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase complement(2288727..2290283) Methylobacterium extorquens CM4 7116137 YP_002420967.1 CDS Mchl_2192 NC_011757.1 2290415 2291674 R PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1857 glycosyl transferase group 1; group 1 glycosyl transferase complement(2290415..2291674) Methylobacterium extorquens CM4 7116138 YP_002420968.1 CDS Mchl_2193 NC_011757.1 2291847 2292425 R PFAM: polysaccharide export protein; KEGG: mex:Mext_1858 polysaccharide export protein; polysaccharide export protein complement(2291847..2292425) Methylobacterium extorquens CM4 7116139 YP_002420969.1 CDS Mchl_2194 NC_011757.1 2292647 2295061 D PFAM: lipopolysaccharide biosynthesis protein; KEGG: mex:Mext_1859 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 2292647..2295061 Methylobacterium extorquens CM4 7116140 YP_002420970.1 CDS Mchl_2195 NC_011757.1 2295616 2295939 R PFAM: conserved hypothetical protein; KEGG: mex:Mext_1860 hypothetical protein; hypothetical protein complement(2295616..2295939) Methylobacterium extorquens CM4 7116141 YP_002420971.1 CDS Mchl_2196 NC_011757.1 2296030 2297910 R KEGG: mex:Mext_1861 DNA polymerase III subunits gamma and tau; TIGRFAM: DNA polymerase III subunits gamma and tau; PFAM: ATPase AAA central domain protein; SMART: ATPase AAA; DNA polymerase III subunits gamma and tau complement(2296030..2297910) Methylobacterium extorquens CM4 7116142 YP_002420972.1 CDS Mchl_2197 NC_011757.1 2298167 2298655 D KEGG: mex:Mext_1862 hypothetical protein; hypothetical protein 2298167..2298655 Methylobacterium extorquens CM4 7116144 YP_002420973.1 CDS Mchl_2198 NC_011757.1 2298690 2298950 R KEGG: mex:Mext_1863 hypothetical protein; hypothetical protein complement(2298690..2298950) Methylobacterium extorquens CM4 7116145 YP_002420974.1 CDS Mchl_2199 NC_011757.1 2299100 2300638 D KEGG: mpo:Mpop_1815 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; Mg chelatase subunit ChlI 2299100..2300638 Methylobacterium extorquens CM4 7116146 YP_002420975.1 CDS Mchl_2200 NC_011757.1 2300937 2301545 D PFAM: glutathione S-transferase domain; KEGG: mex:Mext_1924 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein 2300937..2301545 Methylobacterium extorquens CM4 7116147 YP_002420976.1 CDS Mchl_2201 NC_011757.1 2301722 2302918 D PFAM: hypothetical protein; KEGG: mex:Mext_1925 hypothetical protein; hypothetical protein 2301722..2302918 Methylobacterium extorquens CM4 7116148 YP_002420977.1 CDS Mchl_2202 NC_011757.1 2302950 2304293 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1926 ATPase domain-containing protein; histidine kinase 2302950..2304293 Methylobacterium extorquens CM4 7116149 YP_002420978.1 CDS Mchl_2203 NC_011757.1 2304316 2304639 R KEGG: mex:Mext_1927 hypothetical protein; hypothetical protein complement(2304316..2304639) Methylobacterium extorquens CM4 7116150 YP_002420979.1 CDS Mchl_2204 NC_011757.1 2304952 2305620 R PFAM: cysteine peptidase; KEGG: mex:Mext_1928 cysteine peptidase; cysteine peptidase complement(2304952..2305620) Methylobacterium extorquens CM4 7116151 YP_002420980.1 CDS Mchl_2205 NC_011757.1 2305864 2306283 D PFAM: thioesterase superfamily protein; KEGG: mex:Mext_1929 thioesterase superfamily protein; thioesterase superfamily protein 2305864..2306283 Methylobacterium extorquens CM4 7116152 YP_002420981.1 CDS Mchl_2206 NC_011757.1 2306319 2307224 R PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: mex:Mext_1930 alpha/beta hydrolase domain-containing protein; alpha/beta hydrolase fold-3 domain-containing protein complement(2306319..2307224) Methylobacterium extorquens CM4 7116153 YP_002420982.1 CDS Mchl_2207 NC_011757.1 2307288 2308274 R PFAM: sporulation domain protein; lytic transglycosylase catalytic; KEGG: mex:Mext_1931 lytic transglycosylase catalytic; lytic transglycosylase complement(2307288..2308274) Methylobacterium extorquens CM4 7116154 YP_002420983.1 CDS Mchl_2208 NC_011757.1 2308441 2310621 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mex:Mext_1932 molybdopterin oxidoreductase; molybdopterin oxidoreductase 2308441..2310621 Methylobacterium extorquens CM4 7116155 YP_002420984.1 CDS Mchl_2209 NC_011757.1 2310728 2312356 D PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1933 ABC transporter related; ABC transporter 2310728..2312356 Methylobacterium extorquens CM4 7116156 YP_002420985.1 CDS Mchl_2210 NC_011757.1 2312360 2313577 D KEGG: mex:Mext_1934 phosphopentomutase; TIGRFAM: phosphopentomutase; PFAM: metalloenzyme domain protein; phosphopentomutase domain protein; phosphopentomutase 2312360..2313577 Methylobacterium extorquens CM4 7116157 YP_002420986.1 CDS Mchl_2211 NC_011757.1 2313866 2315518 R ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein complement(2313866..2315518) Methylobacterium extorquens CM4 7116158 YP_002420987.1 CDS Mchl_2212 NC_011757.1 2315754 2316032 R KEGG: mex:Mext_1936 hypothetical protein; hypothetical protein complement(2315754..2316032) Methylobacterium extorquens CM4 7116159 YP_002420988.1 CDS Mchl_2213 NC_011757.1 2316043 2316918 R PFAM: DNA/RNA non-specific endonuclease; KEGG: mex:Mext_1937 DNA/RNA non-specific endonuclease; DNA/RNA non-specific endonuclease complement(2316043..2316918) Methylobacterium extorquens CM4 7116160 YP_002420989.1 CDS Mchl_2214 NC_011757.1 2316926 2317180 R KEGG: mex:Mext_1938 hypothetical protein; hypothetical protein complement(2316926..2317180) Methylobacterium extorquens CM4 7116161 YP_002420990.1 CDS Mchl_2215 NC_011757.1 2317504 2319486 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2317504..2319486 Methylobacterium extorquens CM4 7116162 YP_002420991.1 CDS Mchl_2216 NC_011757.1 2319695 2320720 D TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_1940 hopanoid-associated sugar epimerase; hopanoid-associated sugar epimerase 2319695..2320720 Methylobacterium extorquens CM4 7116163 YP_002420992.1 CDS Mchl_2217 NC_011757.1 2320717 2321616 D TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: mex:Mext_1941 squalene synthase HpnC; squalene synthase HpnC 2320717..2321616 Methylobacterium extorquens CM4 7116164 YP_002420993.1 CDS Mchl_2218 NC_011757.1 2321613 2322464 D TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: mex:Mext_1942 squalene synthase HpnD; squalene synthase HpnD 2321613..2322464 Methylobacterium extorquens CM4 7116165 YP_002420994.1 CDS Mchl_2219 NC_011757.1 2322464 2323765 D TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; KEGG: mex:Mext_1943 squalene-associated FAD-dependent desaturase; squalene-associated FAD-dependent desaturase 2322464..2323765 Methylobacterium extorquens CM4 7116166 YP_002420995.1 CDS Mchl_2220 NC_011757.1 2323810 2325813 D KEGG: mex:Mext_1944 squalene-hopene cyclase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: prenyltransferase/squalene oxidase; squalene-hopene cyclase 2323810..2325813 Methylobacterium extorquens CM4 7116167 YP_002420996.1 CDS Mchl_2221 NC_011757.1 2325939 2326607 D KEGG: mex:Mext_1945 hypothetical protein; hypothetical protein 2325939..2326607 Methylobacterium extorquens CM4 7114693 YP_002420997.1 CDS Mchl_2222 NC_011757.1 2326702 2328075 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class I and II; aminotransferase class-III; KEGG: mex:Mext_1946 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase complement(2326702..2328075) Methylobacterium extorquens CM4 7114778 YP_002420998.1 CDS Mchl_2223 NC_011757.1 2328072 2335478 R PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KR domain protein; beta-ketoacyl synthase ; acyl transferase; KEGG: mex:Mext_1947 beta-ketoacyl synthase; beta-ketoacyl synthase complement(2328072..2335478) Methylobacterium extorquens CM4 7114779 YP_002420999.1 CDS Mchl_2224 NC_011757.1 2335998 2337302 R KEGG: mex:Mext_1948 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase complement(2335998..2337302) Methylobacterium extorquens CM4 7114780 YP_002421000.1 CDS Mchl_2225 NC_011757.1 2337402 2339555 R PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1949 glycosyl transferase; family 2 glycosyl transferase complement(2337402..2339555) Methylobacterium extorquens CM4 7114781 YP_002421001.1 CDS Mchl_2226 NC_011757.1 2339562 2340608 R KEGG: mex:Mext_1950 hypothetical protein; hypothetical protein complement(2339562..2340608) Methylobacterium extorquens CM4 7114782 YP_002421002.1 CDS Mchl_2227 NC_011757.1 2341176 2342474 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1951 major facilitator transporter; major facilitator superfamily protein complement(2341176..2342474) Methylobacterium extorquens CM4 7114784 YP_002421003.1 CDS Mchl_2228 NC_011757.1 2343094 2344476 D PFAM: ethanolamine ammonia lyase large subunit; KEGG: mex:Mext_1952 ethanolamine ammonia lyase large subunit; ethanolamine ammonia lyase large subunit 2343094..2344476 Methylobacterium extorquens CM4 7114785 YP_002421004.1 CDS Mchl_2229 NC_011757.1 2344473 2345267 D PFAM: ethanolamine ammonia-lyase light chain; KEGG: mex:Mext_1953 ethanolamine ammonia-lyase; ethanolamine ammonia-lyase 2344473..2345267 Methylobacterium extorquens CM4 7114786 YP_002421005.1 CDS Mchl_2230 NC_011757.1 2345713 2347443 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2345713..2347443 Methylobacterium extorquens CM4 7114787 YP_002421006.1 CDS Mchl_2231 NC_011757.1 2347430 2348317 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_1955 Sel1 domain-containing protein; Sel1 domain-containing protein repeat-containing protein 2347430..2348317 Methylobacterium extorquens CM4 7114788 YP_002421007.1 CDS Mchl_2232 NC_011757.1 2348349 2349143 R TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_1956 exodeoxyribonuclease III Xth; exodeoxyribonuclease III Xth complement(2348349..2349143) Methylobacterium extorquens CM4 7114789 YP_002421008.1 CDS Mchl_2233 NC_011757.1 2349304 2349963 D KEGG: mex:Mext_1957 hypothetical protein; hypothetical protein 2349304..2349963 Methylobacterium extorquens CM4 7114790 YP_002421009.1 CDS Mchl_2234 NC_011757.1 2350056 2351987 R PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_1958 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(2350056..2351987) Methylobacterium extorquens CM4 7114791 YP_002421010.1 CDS Mchl_2235 NC_011757.1 2352204 2352380 R PFAM: protein of unknown function DUF465; KEGG: mex:Mext_1959 hypothetical protein; hypothetical protein complement(2352204..2352380) Methylobacterium extorquens CM4 7114792 YP_002421011.1 CDS Mchl_2236 NC_011757.1 2352632 2352853 D PFAM: protein of unknown function DUF465; KEGG: mex:Mext_1960 hypothetical protein; hypothetical protein 2352632..2352853 Methylobacterium extorquens CM4 7114793 YP_002421012.1 CDS Mchl_2237 NC_011757.1 2353081 2353257 R KEGG: mex:Mext_1961 hypothetical protein; hypothetical protein complement(2353081..2353257) Methylobacterium extorquens CM4 7114794 YP_002421013.1 CDS Mchl_2238 NC_011757.1 2353544 2354056 D KEGG: mex:Mext_1962 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase, catalytic subunit 2353544..2354056 Methylobacterium extorquens CM4 7114795 YP_002421014.1 CDS Mchl_2239 NC_011757.1 2354074 2355186 D KEGG: mex:Mext_1963 phosphoribosylaminoimidazole carboxylase, ATPase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylaminoimidazole carboxylase, ATPase subunit 2354074..2355186 Methylobacterium extorquens CM4 7114796 YP_002421015.1 CDS Mchl_2240 NC_011757.1 2355574 2356434 D PFAM: hypotheticalprotein; Tetratricopeptide TPR_2 repeat protein; SMART: hypothetical protein; KEGG: mex:Mext_1964 hypotheticalprotein; hypothetical protein 2355574..2356434 Methylobacterium extorquens CM4 7114797 YP_002421016.1 CDS Mchl_2241 NC_011757.1 2356840 2357220 D PFAM: response regulator receiver; KEGG: mex:Mext_1965 response regulator receiver; response regulator receiver protein 2356840..2357220 Methylobacterium extorquens CM4 7114798 YP_002421017.1 CDS glpX NC_011757.1 2357291 2358286 R type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II complement(2357291..2358286) Methylobacterium extorquens CM4 7114799 YP_002421018.1 CDS Mchl_2243 NC_011757.1 2358523 2359845 R catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase complement(2358523..2359845) Methylobacterium extorquens CM4 7114800 YP_002421019.1 CDS Mchl_2244 NC_011757.1 2360212 2360511 D KEGG: mex:Mext_1968 hypothetical protein; hypothetical protein 2360212..2360511 Methylobacterium extorquens CM4 7114801 YP_002421020.1 CDS Mchl_2245 NC_011757.1 2360551 2361534 R KEGG: mex:Mext_1969 hypothetical protein; hypothetical protein complement(2360551..2361534) Methylobacterium extorquens CM4 7114802 YP_002421021.1 CDS Mchl_2246 NC_011757.1 2361642 2361998 R KEGG: mex:Mext_1970 hypothetical protein; hypothetical protein complement(2361642..2361998) Methylobacterium extorquens CM4 7114803 YP_002421022.1 CDS Mchl_2247 NC_011757.1 2362056 2363306 R PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: mex:Mext_1971 Na+ dependent nucleoside transporter; Na+ dependent nucleoside transporter domain-containing protein complement(2362056..2363306) Methylobacterium extorquens CM4 7114804 YP_002421023.1 CDS Mchl_2248 NC_011757.1 2363416 2364078 R KEGG: mex:Mext_1972 hypothetical protein; hypothetical protein complement(2363416..2364078) Methylobacterium extorquens CM4 7114805 YP_002421024.1 CDS Mchl_2249 NC_011757.1 2364391 2364726 D hypothetical protein 2364391..2364726 Methylobacterium extorquens CM4 7114806 YP_002421025.1 CDS Mchl_2250 NC_011757.1 2364780 2365928 R PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1973 glycosyl transferase group 1; group 1 glycosyl transferase complement(2364780..2365928) Methylobacterium extorquens CM4 7114807 YP_002421026.1 CDS Mchl_2251 NC_011757.1 2366012 2367214 D KEGG: mex:Mext_1974 DNA topoisomerase I; DNA topoisomerase I 2366012..2367214 Methylobacterium extorquens CM4 7114808 YP_002421027.1 CDS Mchl_2252 NC_011757.1 2367234 2368328 R PFAM: chemotaxis sensory transducer; KEGG: mex:Mext_1975 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2367234..2368328) Methylobacterium extorquens CM4 7114809 YP_002421028.1 CDS Mchl_2253 NC_011757.1 2368639 2370054 D PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: mex:Mext_1976 cytochrome bd ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I 2368639..2370054 Methylobacterium extorquens CM4 7114810 YP_002421029.1 CDS Mchl_2254 NC_011757.1 2370147 2370854 R PFAM: regulatory protein LuxR; KEGG: mex:Mext_1977 regulatory protein LuxR; LuxR family transcriptional regulator complement(2370147..2370854) Methylobacterium extorquens CM4 7114811 YP_002421030.1 CDS Mchl_2255 NC_011757.1 2371036 2371932 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: mex:Mext_1978 diguanylate cyclase; response regulator receiver modulated diguanylate cyclase complement(2371036..2371932) Methylobacterium extorquens CM4 7114812 YP_002421031.1 CDS Mchl_2256 NC_011757.1 2372039 2372485 R KEGG: mex:Mext_1979 hypothetical protein; hypothetical protein complement(2372039..2372485) Methylobacterium extorquens CM4 7114813 YP_002421032.1 CDS Mchl_2257 NC_011757.1 2372650 2372898 R KEGG: mex:Mext_1980 hypothetical protein; hypothetical protein complement(2372650..2372898) Methylobacterium extorquens CM4 7114814 YP_002421033.1 CDS Mchl_2258 NC_011757.1 2373352 2374182 D PFAM: iron permease FTR1; KEGG: mex:Mext_1981 iron permease FTR1; iron permease FTR1 2373352..2374182 Methylobacterium extorquens CM4 7114815 YP_002421034.1 CDS Mchl_2259 NC_011757.1 2374291 2374764 R PFAM: protein-tyrosine phosphatase, low molecular weight; KEGG: mex:Mext_1982 low molecular weight phosphotyrosine protein phosphatase; protein-tyrosine phosphatase, low molecular weight complement(2374291..2374764) Methylobacterium extorquens CM4 7114816 YP_002421035.1 CDS Mchl_2260 NC_011757.1 2375072 2375596 R PFAM: conserved hypothetical protein; KEGG: mex:Mext_1983 hypothetical protein; hypothetical protein complement(2375072..2375596) Methylobacterium extorquens CM4 7114817 YP_002421036.1 CDS Mchl_2261 NC_011757.1 2375726 2377021 R PFAM: histidinol dehydrogenase; KEGG: mex:Mext_1984 histidinol dehydrogenase; histidinol dehydrogenase complement(2375726..2377021) Methylobacterium extorquens CM4 7114818 YP_002421037.1 CDS Mchl_2262 NC_011757.1 2377053 2377508 R KEGG: mex:Mext_1985 hypothetical protein; hypothetical protein complement(2377053..2377508) Methylobacterium extorquens CM4 7114819 YP_002421038.1 CDS Mchl_2263 NC_011757.1 2377802 2378182 D KEGG: mex:Mext_1986 hypothetical protein; hypothetical protein 2377802..2378182 Methylobacterium extorquens CM4 7114820 YP_002421039.1 CDS Mchl_2264 NC_011757.1 2378278 2379567 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(2378278..2379567) Methylobacterium extorquens CM4 7114821 YP_002421040.1 CDS Mchl_2265 NC_011757.1 2379759 2379908 R KEGG: mpo:Mpop_1943 hypothetical protein; hypothetical protein complement(2379759..2379908) Methylobacterium extorquens CM4 7114822 YP_002421041.1 CDS Mchl_2266 NC_011757.1 2380497 2381885 D catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 2380497..2381885 Methylobacterium extorquens CM4 7114823 YP_002421042.1 CDS Mchl_2267 NC_011757.1 2381925 2382131 D KEGG: mex:Mext_1990 hypothetical protein; hypothetical protein 2381925..2382131 Methylobacterium extorquens CM4 7114824 YP_002421043.1 CDS Mchl_2269 NC_011757.1 2382602 2383156 R KEGG: mex:Mext_1992 hypothetical protein; hypothetical protein complement(2382602..2383156) Methylobacterium extorquens CM4 7114826 YP_002421044.1 CDS Mchl_2270 NC_011757.1 2383362 2383667 D PFAM: PhnA protein; KEGG: mpo:Mpop_1948 PhnA protein; PhnA protein 2383362..2383667 Methylobacterium extorquens CM4 7114827 YP_002421045.1 CDS Mchl_2271 NC_011757.1 2383690 2384421 R PFAM: beta-lactamase; KEGG: mex:Mext_1994 beta-lactamase domain-containing protein; beta-lactamase complement(2383690..2384421) Methylobacterium extorquens CM4 7114828 YP_002421046.1 CDS Mchl_2272 NC_011757.1 2384804 2385970 D PFAM: regulatory protein LuxR; KEGG: mex:Mext_1995 regulatory protein LuxR; LuxR family transcriptional regulator 2384804..2385970 Methylobacterium extorquens CM4 7114829 YP_002421047.1 CDS Mchl_2273 NC_011757.1 2386108 2387490 D KEGG: mex:Mext_1996 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II; phospho-2-dehydro-3-deoxyheptonate aldolase 2386108..2387490 Methylobacterium extorquens CM4 7114830 YP_002421048.1 CDS Mchl_2274 NC_011757.1 2387711 2387926 D KEGG: mex:Mext_1997 hypothetical protein; hypothetical protein 2387711..2387926 Methylobacterium extorquens CM4 7114831 YP_002421049.1 CDS Mchl_2275 NC_011757.1 2388004 2388549 R KEGG: mex:Mext_1998 hypothetical protein; hypothetical protein complement(2388004..2388549) Methylobacterium extorquens CM4 7114832 YP_002421050.1 CDS Mchl_2276 NC_011757.1 2388881 2389795 D PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: mex:Mext_1999 hypothetical protein; hypothetical protein 2388881..2389795 Methylobacterium extorquens CM4 7114833 YP_002421051.1 CDS gmk NC_011757.1 2389830 2390501 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 2389830..2390501 Methylobacterium extorquens CM4 7114834 YP_002421052.1 CDS Mchl_2278 NC_011757.1 2390548 2392296 R PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: ATPase AAA; KEGG: mex:Mext_2001 ABC transporter related; ABC transporter complement(2390548..2392296) Methylobacterium extorquens CM4 7114835 YP_002421053.1 CDS Mchl_2279 NC_011757.1 2392460 2392975 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2002 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(2392460..2392975) Methylobacterium extorquens CM4 7114836 YP_002421054.1 CDS Mchl_2280 NC_011757.1 2393164 2393829 R KEGG: mex:Mext_2003 cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; cob(II)yrinic acid a,c-diamide reductase complement(2393164..2393829) Methylobacterium extorquens CM4 7114837 YP_002421055.1 CDS Mchl_2281 NC_011757.1 2394343 2394738 D KEGG: mex:Mext_2004 hypothetical protein; hypothetical protein 2394343..2394738 Methylobacterium extorquens CM4 7114838 YP_002421056.1 CDS Mchl_2282 NC_011757.1 2394777 2396951 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2005 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(2394777..2396951) Methylobacterium extorquens CM4 7114839 YP_002421057.1 CDS Mchl_2283 NC_011757.1 2397456 2398076 R KEGG: mex:Mext_2006 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase complement(2397456..2398076) Methylobacterium extorquens CM4 7114840 YP_002421058.1 CDS Mchl_2284 NC_011757.1 2398129 2399958 R catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase complement(2398129..2399958) Methylobacterium extorquens CM4 7114841 YP_002421059.1 CDS hslO NC_011757.1 2400308 2401315 R becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin complement(2400308..2401315) Methylobacterium extorquens CM4 7114842 YP_002421060.1 CDS Mchl_2286 NC_011757.1 2401575 2403686 R PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_2010 carbohydrate-selective porin OprB; carbohydrate-selective porin OprB complement(2401575..2403686) Methylobacterium extorquens CM4 7114843 YP_002421061.1 CDS Mchl_2287 NC_011757.1 2404044 2404556 R KEGG: mex:Mext_2011 hypothetical protein; hypothetical protein complement(2404044..2404556) Methylobacterium extorquens CM4 7114844 YP_002421062.1 CDS ndk NC_011757.1 2404934 2405356 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 2404934..2405356 Methylobacterium extorquens CM4 7114845 YP_002421063.1 CDS Mchl_2289 NC_011757.1 2405641 2406021 D KEGG: mex:Mext_2013 hypothetical protein; hypothetical protein 2405641..2406021 Methylobacterium extorquens CM4 7114846 YP_002421064.1 CDS Mchl_2290 NC_011757.1 2406120 2407256 R PFAM: peptidase M48 Ste24p; KEGG: mex:Mext_2014 peptidase M48 Ste24p; peptidase M48 Ste24p complement(2406120..2407256) Methylobacterium extorquens CM4 7114847 YP_002421065.1 CDS Mchl_2291 NC_011757.1 2407264 2407596 R KEGG: mex:Mext_2015 hypothetical protein; hypothetical protein complement(2407264..2407596) Methylobacterium extorquens CM4 7114848 YP_002421066.1 CDS Mchl_2292 NC_011757.1 2407632 2408552 R PFAM: protein of unknown function DUF898 transmembrane; KEGG: mex:Mext_2015 hypothetical protein; hypothetical protein complement(2407632..2408552) Methylobacterium extorquens CM4 7114849 YP_002421067.1 CDS Mchl_2293 NC_011757.1 2408941 2409174 R PFAM: protein of unknown function DUF466; KEGG: mex:Mext_2016 hypothetical protein; hypothetical protein complement(2408941..2409174) Methylobacterium extorquens CM4 7114850 YP_002421068.1 CDS Mchl_2294 NC_011757.1 2409182 2411239 R PFAM: carbon starvation protein CstA; KEGG: mex:Mext_2017 carbon starvation protein CstA; carbon starvation protein CstA complement(2409182..2411239) Methylobacterium extorquens CM4 7114851 YP_002421069.1 CDS Mchl_2295 NC_011757.1 2411539 2412165 R PFAM: protein of unknown function DUF477; KEGG: mex:Mext_2018 hypothetical protein; hypothetical protein complement(2411539..2412165) Methylobacterium extorquens CM4 7114852 YP_002421070.1 CDS Mchl_2296 NC_011757.1 2412155 2412940 R PFAM: protein of unknown function DUF477; KEGG: mex:Mext_2019 hypothetical protein; hypothetical protein complement(2412155..2412940) Methylobacterium extorquens CM4 7116958 YP_002421071.1 CDS Mchl_2297 NC_011757.1 2412960 2413595 R PFAM: LemA family protein; KEGG: mex:Mext_2020 LemA family protein; LemA family protein complement(2412960..2413595) Methylobacterium extorquens CM4 7116959 YP_002421072.1 CDS Mchl_2298 NC_011757.1 2413840 2414154 D TIGRFAM: conserved hypothetical protein; PFAM: Selenoprotein W-related; KEGG: mex:Mext_2021 selenoprotein; hypothetical protein 2413840..2414154 Methylobacterium extorquens CM4 7116793 YP_002421073.1 CDS Mchl_2299 NC_011757.1 2414254 2416395 D KEGG: mex:Mext_2022 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; signal transduction histidine kinase 2414254..2416395 Methylobacterium extorquens CM4 7116877 YP_002421074.1 CDS Mchl_2300 NC_011757.1 2416427 2417263 R PFAM: aldo/keto reductase; KEGG: mex:Mext_2023 2,5-didehydrogluconate reductase; 2,5-didehydrogluconate reductase complement(2416427..2417263) Methylobacterium extorquens CM4 7116878 YP_002421075.1 CDS Mchl_2301 NC_011757.1 2417378 2418157 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_2024 cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator complement(2417378..2418157) Methylobacterium extorquens CM4 7116879 YP_002421076.1 CDS glgA NC_011757.1 2418383 2419915 R catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase complement(2418383..2419915) Methylobacterium extorquens CM4 7116880 YP_002421077.1 CDS Mchl_2303 NC_011757.1 2420443 2421789 R PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mpo:Mpop_1988 alpha amylase catalytic region; alpha amylase catalytic subunit complement(2420443..2421789) Methylobacterium extorquens CM4 7116881 YP_002421078.1 CDS Mchl_2304 NC_011757.1 2422117 2424651 D KEGG: mex:Mext_2028 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 2422117..2424651 Methylobacterium extorquens CM4 7116882 YP_002421079.1 CDS Mchl_2305 NC_011757.1 2424828 2425769 R KEGG: mex:Mext_2030 ferredoxin-NAD reductase component; ferredoxin-NAD reductase component complement(2424828..2425769) Methylobacterium extorquens CM4 7116883 YP_002421080.1 CDS Mchl_2306 NC_011757.1 2425813 2426241 R KEGG: mex:Mext_2031 hypothetical protein; hypothetical protein complement(2425813..2426241) Methylobacterium extorquens CM4 7116884 YP_002421081.1 CDS Mchl_2307 NC_011757.1 2426362 2429514 R KEGG: mex:Mext_2032 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; diguanylate cyclase/phosphodiesterase complement(2426362..2429514) Methylobacterium extorquens CM4 7116885 YP_002421082.1 CDS Mchl_2308 NC_011757.1 2429593 2430624 D PFAM: glycosyl transferase family 4; KEGG: mex:Mext_2033 glycosyl transferase; glycosyl transferase family protein 2429593..2430624 Methylobacterium extorquens CM4 7116886 YP_002421083.1 CDS Mchl_2309 NC_011757.1 2430636 2431559 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: mex:Mext_2034 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2430636..2431559 Methylobacterium extorquens CM4 7116887 YP_002421084.1 CDS Mchl_2310 NC_011757.1 2431564 2432175 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: mex:Mext_2035 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) complement(2431564..2432175) Methylobacterium extorquens CM4 7116888 YP_002421085.1 CDS Mchl_2311 NC_011757.1 2432252 2432659 D PFAM: helix-turn-helix HxlR type; KEGG: mex:Mext_2036 helix-turn-helix HxlR type; HxlR family transcriptional regulator 2432252..2432659 Methylobacterium extorquens CM4 7116889 YP_002421086.1 CDS Mchl_2312 NC_011757.1 2432679 2434652 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KR domain protein; KEGG: mex:Mext_2037 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD complement(2432679..2434652) Methylobacterium extorquens CM4 7116890 YP_002421087.1 CDS Mchl_2313 NC_011757.1 2434756 2435607 R PFAM: protein of unknown function DUF1206; KEGG: mex:Mext_2038 hypothetical protein; hypothetical protein complement(2434756..2435607) Methylobacterium extorquens CM4 7116891 YP_002421088.1 CDS Mchl_2314 NC_011757.1 2435614 2435955 R KEGG: mex:Mext_2039 hypothetical protein; hypothetical protein complement(2435614..2435955) Methylobacterium extorquens CM4 7116892 YP_002421089.1 CDS Mchl_2315 NC_011757.1 2435981 2436547 R PFAM: protein of unknown function DUF820; KEGG: mex:Mext_2040 hypothetical protein; hypothetical protein complement(2435981..2436547) Methylobacterium extorquens CM4 7116893 YP_002421090.1 CDS Mchl_2317 NC_011757.1 2437266 2438714 R PFAM: homospermidine synthase; KEGG: mex:Mext_2042 homospermidine synthase; Homospermidine synthase complement(2437266..2438714) Methylobacterium extorquens CM4 7116895 YP_002421091.1 CDS Mchl_2318 NC_011757.1 2438988 2439176 D KEGG: mex:Mext_2043 hypothetical protein; hypothetical protein 2438988..2439176 Methylobacterium extorquens CM4 7116896 YP_002421092.1 CDS Mchl_2319 NC_011757.1 2439324 2439881 R PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2044 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(2439324..2439881) Methylobacterium extorquens CM4 7116897 YP_002421093.1 CDS Mchl_2320 NC_011757.1 2440060 2441226 R PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mex:Mext_2045 Orn/DAP/Arg decarboxylase 2; ornithine decarboxylase complement(2440060..2441226) Methylobacterium extorquens CM4 7116898 YP_002421094.1 CDS mdoG NC_011757.1 2441911 2443530 D involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 2441911..2443530 Methylobacterium extorquens CM4 7116899 YP_002421095.1 CDS Mchl_2322 NC_011757.1 2443503 2444039 D PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2047 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 2443503..2444039 Methylobacterium extorquens CM4 7116900 YP_002421096.1 CDS Mchl_2323 NC_011757.1 2444183 2445271 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mex:Mext_2048 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase/NADH oxidase 2444183..2445271 Methylobacterium extorquens CM4 7116901 YP_002421097.1 CDS Mchl_2324 NC_011757.1 2445367 2446065 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: mex:Mext_2049 HAD family hydrolase; HAD-superfamily hydrolase 2445367..2446065 Methylobacterium extorquens CM4 7116902 YP_002421098.1 CDS Mchl_2325 NC_011757.1 2446059 2446556 R PFAM: SmpA/OmlA domain protein; KEGG: mex:Mext_2050 SmpA/OmlA domain-containing protein; SmpA/OmlA domain-containing protein complement(2446059..2446556) Methylobacterium extorquens CM4 7116903 YP_002421099.1 CDS Mchl_2326 NC_011757.1 2446714 2447280 D KEGG: mex:Mext_2051 ubiquinol-cytochrome C chaperone; ubiquinol-cytochrome C chaperone 2446714..2447280 Methylobacterium extorquens CM4 7116904 YP_002421100.1 CDS Mchl_2327 NC_011757.1 2447277 2447795 D KEGG: mex:Mext_2052 hypothetical protein; hypothetical protein 2447277..2447795 Methylobacterium extorquens CM4 7116905 YP_002421101.1 CDS Mchl_2328 NC_011757.1 2447960 2449018 D TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: mex:Mext_2053 fatty acid/phospholipid synthesis protein PlsX; fatty acid/phospholipid synthesis protein PlsX 2447960..2449018 Methylobacterium extorquens CM4 7116906 YP_002421102.1 CDS Mchl_2329 NC_011757.1 2449052 2450032 D KEGG: mex:Mext_2054 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 2449052..2450032 Methylobacterium extorquens CM4 7116907 YP_002421103.1 CDS Mchl_2330 NC_011757.1 2450241 2450567 D PFAM: histone family protein DNA-binding protein; KEGG: mex:Mext_2055 histone family protein DNA-binding protein; histone family protein DNA-binding protein 2450241..2450567 Methylobacterium extorquens CM4 7116908 YP_002421104.1 CDS Mchl_2331 NC_011757.1 2450621 2451103 D PFAM: regulatory protein MerR; KEGG: mex:Mext_2056 regulatory protein MerR; MerR family transcriptional regulator 2450621..2451103 Methylobacterium extorquens CM4 7116909 YP_002421105.1 CDS Mchl_2332 NC_011757.1 2451246 2451665 D KEGG: mex:Mext_2057 hypothetical protein; hypothetical protein 2451246..2451665 Methylobacterium extorquens CM4 7116910 YP_002421106.1 CDS Mchl_2333 NC_011757.1 2451807 2452280 D KEGG: mex:Mext_2058 hypothetical protein; hypothetical protein 2451807..2452280 Methylobacterium extorquens CM4 7116911 YP_002421107.1 CDS Mchl_2334 NC_011757.1 2452540 2454492 D PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: mex:Mext_2059 serine protein kinase domain-containing protein; serine protein kinase, PrkA 2452540..2454492 Methylobacterium extorquens CM4 7116912 YP_002421108.1 CDS Mchl_2335 NC_011757.1 2454596 2455900 D PFAM: protein of unknown function DUF444; KEGG: mex:Mext_2060 hypothetical protein; hypothetical protein 2454596..2455900 Methylobacterium extorquens CM4 7116913 YP_002421109.1 CDS Mchl_2336 NC_011757.1 2455948 2457519 D PFAM: SpoVR family protein; KEGG: mex:Mext_2061 hypothetical protein; SpoVR family protein 2455948..2457519 Methylobacterium extorquens CM4 7116914 YP_002421110.1 CDS Mchl_2337 NC_011757.1 2457696 2458355 R TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase; KEGG: mex:Mext_2062 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase complement(2457696..2458355) Methylobacterium extorquens CM4 7116915 YP_002421111.1 CDS Mchl_2338 NC_011757.1 2458352 2459419 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(2458352..2459419) Methylobacterium extorquens CM4 7116916 YP_002421112.1 CDS Mchl_2339 NC_011757.1 2459751 2460863 D PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_2065 hypothetical protein; hypothetical protein 2459751..2460863 Methylobacterium extorquens CM4 7116917 YP_002421113.1 CDS Mchl_2340 NC_011757.1 2460985 2461743 D KEGG: mex:Mext_2066 chromosomal replication initiator DnaA; chromosomal replication initiator DnaA 2460985..2461743 Methylobacterium extorquens CM4 7116918 YP_002421114.1 CDS Mchl_2341 NC_011757.1 2461883 2464249 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 2461883..2464249 Methylobacterium extorquens CM4 7116919 YP_002421115.1 CDS Mchl_2342 NC_011757.1 2464403 2465956 D PFAM: Ppx/GppA phosphatase; KEGG: mex:Mext_2068 Ppx/GppA phosphatase; Ppx/GppA phosphatase 2464403..2465956 Methylobacterium extorquens CM4 7116920 YP_002421116.1 CDS Mchl_2343 NC_011757.1 2466035 2466334 R KEGG: mex:Mext_2069 hypothetical protein; hypothetical protein complement(2466035..2466334) Methylobacterium extorquens CM4 7116921 YP_002421117.1 CDS Mchl_2344 NC_011757.1 2466851 2468053 R PFAM: aminotransferase class I and II; KEGG: mex:Mext_2070 aminotransferase class I and II; class I and II aminotransferase complement(2466851..2468053) Methylobacterium extorquens CM4 7116922 YP_002421118.1 CDS Mchl_2345 NC_011757.1 2468494 2470476 D PFAM: coenzyme A transferase; KEGG: mex:Mext_2071 coenzyme A transferase; coenzyme A transferase 2468494..2470476 Methylobacterium extorquens CM4 7116923 YP_002421119.1 CDS Mchl_2346 NC_011757.1 2470853 2472523 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_2072 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2470853..2472523 Methylobacterium extorquens CM4 7116924 YP_002421120.1 CDS rpsB NC_011757.1 2472761 2473828 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 2472761..2473828 Methylobacterium extorquens CM4 7116925 YP_002421121.1 CDS tsf NC_011757.1 2473973 2474893 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 2473973..2474893 Methylobacterium extorquens CM4 7116926 YP_002421122.1 CDS Mchl_2349 NC_011757.1 2475060 2475782 D TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: mex:Mext_2075 uridylate kinase; uridylate kinase 2475060..2475782 Methylobacterium extorquens CM4 7116927 YP_002421123.1 CDS Mchl_2350 NC_011757.1 2475892 2476431 R catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase complement(2475892..2476431) Methylobacterium extorquens CM4 7116928 YP_002421124.1 CDS Mchl_2351 NC_011757.1 2476718 2477224 R PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2077 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(2476718..2477224) Methylobacterium extorquens CM4 7116929 YP_002421125.1 CDS Mchl_2352 NC_011757.1 2477362 2478087 D KEGG: mex:Mext_2078 hypothetical protein; protein tyrosine/serine phosphatase 2477362..2478087 Methylobacterium extorquens CM4 7116930 YP_002421126.1 CDS Mchl_2353 NC_011757.1 2478096 2479091 D KEGG: mex:Mext_2079 hypothetical protein; hypothetical protein 2478096..2479091 Methylobacterium extorquens CM4 7116931 YP_002421127.1 CDS lpxD NC_011757.1 2479152 2480207 R adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(2479152..2480207) Methylobacterium extorquens CM4 7116932 YP_002421128.1 CDS Mchl_2355 NC_011757.1 2480370 2482934 R TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: mex:Mext_2081 outer membrane protein assembly complex, YaeT protein; outer membrane protein assembly complex, YaeT protein complement(2480370..2482934) Methylobacterium extorquens CM4 7116933 YP_002421129.1 CDS Mchl_2356 NC_011757.1 2483295 2484455 R KEGG: mex:Mext_2082 membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease complement(2483295..2484455) Methylobacterium extorquens CM4 7116934 YP_002421130.1 CDS Mchl_2357 NC_011757.1 2484672 2485850 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(2484672..2485850) Methylobacterium extorquens CM4 7116935 YP_002421131.1 CDS Mchl_2358 NC_011757.1 2485865 2486725 R PFAM: phosphatidate cytidylyltransferase; KEGG: mex:Mext_2084 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(2485865..2486725) Methylobacterium extorquens CM4 7116936 YP_002421132.1 CDS Mchl_2359 NC_011757.1 2486725 2487504 R KEGG: mex:Mext_2085 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase complement(2486725..2487504) Methylobacterium extorquens CM4 7116937 YP_002421133.1 CDS frr NC_011757.1 2487575 2488138 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(2487575..2488138) Methylobacterium extorquens CM4 7116938 YP_002421134.1 CDS Mchl_2361 NC_011757.1 2488471 2489610 D PFAM: CBS domain containing protein; HPP family protein; KEGG: mex:Mext_2087 HPP family protein?; CBS domain-containing membrane protein 2488471..2489610 Methylobacterium extorquens CM4 7116939 YP_002421135.1 CDS Mchl_2362 NC_011757.1 2489781 2489876 D KEGG: met:M446_6426 hypothetical protein; hypothetical protein 2489781..2489876 Methylobacterium extorquens CM4 7116940 YP_002421136.1 CDS Mchl_2363 NC_011757.1 2489949 2491229 R TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mex:Mext_2088 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase complement(2489949..2491229) Methylobacterium extorquens CM4 7116941 YP_002421137.1 CDS Mchl_2364 NC_011757.1 2491622 2492566 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_2089 LysR substrate-binding; LysR family transcriptional regulator 2491622..2492566 Methylobacterium extorquens CM4 7116942 YP_002421138.1 CDS Mchl_2365 NC_011757.1 2492812 2493561 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_2090 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2492812..2493561 Methylobacterium extorquens CM4 7116943 YP_002421139.1 CDS Mchl_2366 NC_011757.1 2493579 2494439 D PFAM: transketolase; KEGG: mex:Mext_2091 transketolase domain-containing protein; transketolase 2493579..2494439 Methylobacterium extorquens CM4 7116944 YP_002421140.1 CDS Mchl_2367 NC_011757.1 2494436 2495455 D PFAM: transketolase; transketolase domain protein; KEGG: mex:Mext_2092 transketolase; transketolase 2494436..2495455 Methylobacterium extorquens CM4 7116945 YP_002421141.1 CDS Mchl_2368 NC_011757.1 2495618 2496634 D TIGRFAM: TRAP dicarboxylate transporter DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: mex:Mext_2093 TRAP dicarboxylate transporter DctP subunit; TRAP dicarboxylate transporter subunit DctP 2495618..2496634 Methylobacterium extorquens CM4 7116946 YP_002421142.1 CDS Mchl_2369 NC_011757.1 2496646 2498532 D PFAM: tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transporter permease DctM subunit; KEGG: mex:Mext_2094 TRAP C4-dicarboxylate transporter permease DctM subunit; TRAP dicarboxylate transporter subunit DctM 2496646..2498532 Methylobacterium extorquens CM4 7116947 YP_002421143.1 CDS Mchl_2370 NC_011757.1 2498614 2498790 R hypothetical protein complement(2498614..2498790) Methylobacterium extorquens CM4 7116948 YP_002421144.1 CDS Mchl_2371 NC_011757.1 2499237 2500127 D KEGG: mex:Mext_2095 hypothetical protein; hypothetical protein 2499237..2500127 Methylobacterium extorquens CM4 7116949 YP_002421145.1 CDS Mchl_2372 NC_011757.1 2500367 2508757 R PFAM: Hemolysin-type calcium-binding region; Na-Ca exchanger/integrin-beta4; endonuclease/exonuclease/phosphatase; 5'-nucleotidase domain protein; KEGG: rpb:RPB_0803 5'-nucleotidase; 5'-nucleotidase domain-containing protein complement(2500367..2508757) Methylobacterium extorquens CM4 7116950 YP_002421146.1 CDS Mchl_2373 NC_011757.1 2509178 2510041 D PFAM: acyl-CoA thioesterase; KEGG: mex:Mext_2097 acyl-CoA thioesterase II; Palmitoyl-CoA hydrolase 2509178..2510041 Methylobacterium extorquens CM4 7116951 YP_002421147.1 CDS Mchl_2374 NC_011757.1 2510304 2510642 D PFAM: nitrogen regulatory protein P-II; KEGG: mex:Mext_2098 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 2510304..2510642 Methylobacterium extorquens CM4 7116952 YP_002421148.1 CDS Mchl_2375 NC_011757.1 2510775 2512271 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mex:Mext_2099 ammonium transporter; ammonium transporter 2510775..2512271 Methylobacterium extorquens CM4 7116953 YP_002421149.1 CDS Mchl_2376 NC_011757.1 2512613 2513875 D KEGG: mex:Mext_2100 hypothetical protein; hypothetical protein 2512613..2513875 Methylobacterium extorquens CM4 7116954 YP_002421150.1 CDS Mchl_2377 NC_011757.1 2514057 2516672 D PFAM: cell divisionFtsK/SpoIIIE; KEGG: mex:Mext_2101 cell divisionFtsK/SpoIIIE; cell division FtsK/SpoIIIE 2514057..2516672 Methylobacterium extorquens CM4 7116955 YP_002421151.1 CDS Mchl_2378 NC_011757.1 2516823 2518982 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2102 TonB-dependent receptor plug; TonB-dependent receptor 2516823..2518982 Methylobacterium extorquens CM4 7116956 YP_002421152.1 CDS Mchl_2379 NC_011757.1 2519338 2521305 D KEGG: mex:Mext_2103 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase 2519338..2521305 Methylobacterium extorquens CM4 7116957 YP_002421153.1 CDS Mchl_2380 NC_011757.1 2521530 2521832 R KEGG: mex:Mext_2104 hypothetical protein; hypothetical protein complement(2521530..2521832) Methylobacterium extorquens CM4 7117780 YP_002421154.1 CDS Mchl_2381 NC_011757.1 2521850 2524168 R TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mex:Mext_2105 oxidoreductase alpha (molybdopterin) subunit; oxidoreductase alpha (molybdopterin) subunit complement(2521850..2524168) Methylobacterium extorquens CM4 7113736 YP_002421155.1 CDS Mchl_2382 NC_011757.1 2524691 2525767 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase complement(2524691..2525767) Methylobacterium extorquens CM4 7113737 YP_002421156.1 CDS Mchl_2383 NC_011757.1 2525764 2526114 R PFAM: protein of unknown function DUF952; KEGG: mex:Mext_2107 hypothetical protein; hypothetical protein complement(2525764..2526114) Methylobacterium extorquens CM4 7113738 YP_002421157.1 CDS Mchl_2384 NC_011757.1 2526337 2526969 D PFAM: peptidase S24 and S26 domain protein; KEGG: mex:Mext_2108 peptidase S24/S26 domain-containing protein; phage repressor 2526337..2526969 Methylobacterium extorquens CM4 7113739 YP_002421158.1 CDS Mchl_2385 NC_011757.1 2526980 2527309 R KEGG: mex:Mext_2109 hypothetical protein; hypothetical protein complement(2526980..2527309) Methylobacterium extorquens CM4 7113740 YP_002421159.1 CDS Mchl_2386 NC_011757.1 2527480 2527695 R KEGG: mpo:Mpop_2062 hypothetical protein; hypothetical protein complement(2527480..2527695) Methylobacterium extorquens CM4 7113741 YP_002421160.1 CDS Mchl_2387 NC_011757.1 2527831 2528691 R KEGG: mex:Mext_2111 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein; serine O-acetyltransferase complement(2527831..2528691) Methylobacterium extorquens CM4 7113742 YP_002421161.1 CDS Mchl_2388 NC_011757.1 2528973 2529872 R consists of N-terminal helix-turn-helix domain and C-terminal shikimate kinase-like domain which may bind benzoyl-CoA; controls inducible expression of the bzd catabolic operon that is involved in the anaerobic catabolism of benzoate; anaerobic benzoate catabolism transcriptional regulator complement(2528973..2529872) Methylobacterium extorquens CM4 7113743 YP_002421162.1 CDS Mchl_2390 NC_011757.1 2530536 2532809 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: mex:Mext_2113 ATPase domain-containing protein; histidine kinase complement(2530536..2532809) Methylobacterium extorquens CM4 7113745 YP_002421163.1 CDS Mchl_2391 NC_011757.1 2532931 2533134 R KEGG: mex:Mext_2114 hypothetical protein; hypothetical protein complement(2532931..2533134) Methylobacterium extorquens CM4 7113746 YP_002421164.1 CDS Mchl_2392 NC_011757.1 2533146 2533430 R KEGG: mex:Mext_2115 hypothetical protein; hypothetical protein complement(2533146..2533430) Methylobacterium extorquens CM4 7113747 YP_002421165.1 CDS Mchl_2393 NC_011757.1 2533586 2534320 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_2116 response regulator receiver; transcriptional regulator complement(2533586..2534320) Methylobacterium extorquens CM4 7113748 YP_002421166.1 CDS Mchl_2394 NC_011757.1 2534735 2536516 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_2117 histidine kinase; response regulator receiver sensor signal transduction histidine kinase 2534735..2536516 Methylobacterium extorquens CM4 7113749 YP_002421167.1 CDS Mchl_2395 NC_011757.1 2536603 2536986 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_2118 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2536603..2536986) Methylobacterium extorquens CM4 7113750 YP_002421168.1 CDS Mchl_2397 NC_011757.1 2537510 2538241 R PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_2120 cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(2537510..2538241) Methylobacterium extorquens CM4 7113752 YP_002421169.1 CDS Mchl_2398 NC_011757.1 2538425 2539621 R PFAM: PepSY-associated TM helix domain protein; KEGG: mex:Mext_2121 PepSY-associated TM helix domain-containing protein; PepSY-associated TM helix domain-containing protein complement(2538425..2539621) Methylobacterium extorquens CM4 7113753 YP_002421170.1 CDS Mchl_2399 NC_011757.1 2539676 2541856 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2122 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(2539676..2541856) Methylobacterium extorquens CM4 7113754 YP_002421171.1 CDS Mchl_2400 NC_011757.1 2542201 2542701 D KEGG: mex:Mext_2123 hypothetical protein; hypothetical protein 2542201..2542701 Methylobacterium extorquens CM4 7113755 YP_002421172.1 CDS Mchl_2401 NC_011757.1 2542912 2543517 D PFAM: oxidoreductase molybdopterin binding; KEGG: mex:Mext_2124 oxidoreductase molybdopterin binding; molybdopterin binding oxidoreductase 2542912..2543517 Methylobacterium extorquens CM4 7113756 YP_002421173.1 CDS Mchl_2402 NC_011757.1 2543531 2544262 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: mex:Mext_2125 oxidoreductase FAD-binding subunit; oxidoreductase FAD-binding domain-containing protein 2543531..2544262 Methylobacterium extorquens CM4 7113757 YP_002421174.1 CDS Mchl_2403 NC_011757.1 2544445 2544822 R PFAM: conserved hypothetical protein; KEGG: mex:Mext_2126 hypothetical protein; hypothetical protein complement(2544445..2544822) Methylobacterium extorquens CM4 7113758 YP_002421175.1 CDS Mchl_2404 NC_011757.1 2545003 2545275 R KEGG: mpo:Mpop_2084 hypothetical protein; hypothetical protein complement(2545003..2545275) Methylobacterium extorquens CM4 7113759 YP_002421176.1 CDS Mchl_2405 NC_011757.1 2545650 2547011 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 2545650..2547011 Methylobacterium extorquens CM4 7113760 YP_002421177.1 CDS Mchl_2406 NC_011757.1 2547008 2547676 D KEGG: mex:Mext_2129 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase 2547008..2547676 Methylobacterium extorquens CM4 7113761 YP_002421178.1 CDS Mchl_2407 NC_011757.1 2547688 2548005 R PFAM: protein of unknown function DUF167; KEGG: mex:Mext_2130 hypothetical protein; hypothetical protein complement(2547688..2548005) Methylobacterium extorquens CM4 7113762 YP_002421179.1 CDS Mchl_2408 NC_011757.1 2548800 2550098 D KEGG: mex:Mext_2131 hypothetical protein; hypothetical protein 2548800..2550098 Methylobacterium extorquens CM4 7113764 YP_002421180.1 CDS Mchl_2409 NC_011757.1 2550135 2551397 D PFAM: glycosyl transferase family 28; KEGG: mex:Mext_2132 glycosyl transferase; glycosyl transferase family protein 2550135..2551397 Methylobacterium extorquens CM4 7113765 YP_002421181.1 CDS Mchl_2410 NC_011757.1 2551404 2552180 R PFAM: creatininase; KEGG: mex:Mext_2133 creatininase; creatininase complement(2551404..2552180) Methylobacterium extorquens CM4 7113766 YP_002421182.1 CDS Mchl_2411 NC_011757.1 2552329 2553270 D KEGG: mex:Mext_2134 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 2552329..2553270 Methylobacterium extorquens CM4 7113767 YP_002421183.1 CDS Mchl_2412 NC_011757.1 2553254 2553670 R KEGG: mex:Mext_2135 hypothetical protein; hypothetical protein complement(2553254..2553670) Methylobacterium extorquens CM4 7113768 YP_002421184.1 CDS Mchl_2413 NC_011757.1 2553799 2554002 R PFAM: CsbD family protein; KEGG: mex:Mext_2136 CsbD family protein; CsbD family protein complement(2553799..2554002) Methylobacterium extorquens CM4 7113769 YP_002421185.1 CDS Mchl_2414 NC_011757.1 2554307 2555617 D PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_2137 major facilitator transporter; major facilitator superfamily protein 2554307..2555617 Methylobacterium extorquens CM4 7113770 YP_002421186.1 CDS Mchl_2415 NC_011757.1 2555629 2556393 D PFAM: fumarylacetoacetate hydrolase; KEGG: mex:Mext_2138 fumarylacetoacetate hydrolase; fumarylacetoacetate hydrolase 2555629..2556393 Methylobacterium extorquens CM4 7113771 YP_002421187.1 CDS Mchl_2416 NC_011757.1 2556499 2557506 D KEGG: mex:Mext_2139 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; ketopantoate reductase; 2-dehydropantoate 2-reductase 2556499..2557506 Methylobacterium extorquens CM4 7113772 YP_002421188.1 CDS Mchl_2417 NC_011757.1 2557509 2559089 D PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_2140 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 2557509..2559089 Methylobacterium extorquens CM4 7113773 YP_002421189.1 CDS Mchl_2418 NC_011757.1 2559225 2559506 R KEGG: mex:Mext_2141 hypothetical protein; hypothetical protein complement(2559225..2559506) Methylobacterium extorquens CM4 7113774 YP_002421190.1 CDS Mchl_2419 NC_011757.1 2559507 2559761 R KEGG: mex:Mext_2142 hypothetical protein; hypothetical protein complement(2559507..2559761) Methylobacterium extorquens CM4 7113775 YP_002421191.1 CDS Mchl_2420 NC_011757.1 2559877 2560242 R KEGG: mex:Mext_2143 hypothetical protein; hypothetical protein complement(2559877..2560242) Methylobacterium extorquens CM4 7113776 YP_002421192.1 CDS Mchl_2421 NC_011757.1 2560373 2561575 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_2144 major facilitator transporter; major facilitator superfamily protein complement(2560373..2561575) Methylobacterium extorquens CM4 7113777 YP_002421193.1 CDS Mchl_2422 NC_011757.1 2561693 2562595 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_2145 LysR substrate-binding; LysR family transcriptional regulator 2561693..2562595 Methylobacterium extorquens CM4 7113778 YP_002421194.1 CDS Mchl_2423 NC_011757.1 2562579 2562968 R PFAM: 4-oxalocrotonate tautomerase; KEGG: mex:Mext_2146 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(2562579..2562968) Methylobacterium extorquens CM4 7113779 YP_002421195.1 CDS Mchl_2424 NC_011757.1 2563229 2564119 D PFAM: HpcH/HpaI aldolase; KEGG: mex:Mext_2147 citrate (pro-3S)-lyase; Citryl-CoA lyase 2563229..2564119 Methylobacterium extorquens CM4 7113780 YP_002421196.1 CDS Mchl_2425 NC_011757.1 2564189 2564578 R KEGG: mex:Mext_2148 hypothetical protein; hypothetical protein complement(2564189..2564578) Methylobacterium extorquens CM4 7113781 YP_002421197.1 CDS Mchl_2426 NC_011757.1 2564804 2565478 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_2149 HAD family hydrolase; HAD-superfamily hydrolase complement(2564804..2565478) Methylobacterium extorquens CM4 7113782 YP_002421198.1 CDS Mchl_2427 NC_011757.1 2565631 2567043 D KEGG: mex:Mext_2150 hypothetical protein; hypothetical protein 2565631..2567043 Methylobacterium extorquens CM4 7113783 YP_002421199.1 CDS Mchl_2428 NC_011757.1 2567056 2567691 D KEGG: mex:Mext_2151 hypothetical protein; hypothetical protein 2567056..2567691 Methylobacterium extorquens CM4 7113784 YP_002421200.1 CDS Mchl_2429 NC_011757.1 2567790 2568731 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_2152 LysR substrate-binding; LysR family transcriptional regulator complement(2567790..2568731) Methylobacterium extorquens CM4 7113785 YP_002421201.1 CDS Mchl_2430 NC_011757.1 2568866 2569795 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_2153 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2568866..2569795 Methylobacterium extorquens CM4 7113786 YP_002421202.1 CDS Mchl_2431 NC_011757.1 2569872 2570501 D PFAM: phospholipase/carboxylesterase; KEGG: mex:Mext_2154 phospholipase/carboxylesterase; phospholipase/carboxylesterase 2569872..2570501 Methylobacterium extorquens CM4 7113787 YP_002421203.1 CDS Mchl_2433 NC_011757.1 2571093 2571320 D KEGG: mex:Mext_2155 hypothetical protein; hypothetical protein 2571093..2571320 Methylobacterium extorquens CM4 7113789 YP_002421204.1 CDS Mchl_2434 NC_011757.1 2571869 2575348 D KEGG: mex:Mext_2156 hypothetical protein; hypothetical protein 2571869..2575348 Methylobacterium extorquens CM4 7113790 YP_002421205.1 CDS rpsL NC_011757.1 2575737 2576108 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 2575737..2576108 Methylobacterium extorquens CM4 7113791 YP_002421206.1 CDS Mchl_2436 NC_011757.1 2576215 2576685 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 2576215..2576685 Methylobacterium extorquens CM4 7113792 YP_002421207.1 CDS Mchl_2437 NC_011757.1 2576749 2578824 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 2576749..2578824 Methylobacterium extorquens CM4 7113793 YP_002421208.1 CDS Mchl_2438 NC_011757.1 2578878 2580068 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 2578878..2580068 Methylobacterium extorquens CM4 7113794 YP_002421209.1 CDS rpsJ NC_011757.1 2580148 2580456 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 2580148..2580456 Methylobacterium extorquens CM4 7113795 YP_002421210.1 CDS rplC NC_011757.1 2580507 2581247 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 2580507..2581247 Methylobacterium extorquens CM4 7113796 YP_002421211.1 CDS rplD NC_011757.1 2581247 2581867 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 2581247..2581867 Methylobacterium extorquens CM4 7113797 YP_002421212.1 CDS rplW NC_011757.1 2581864 2582160 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 2581864..2582160 Methylobacterium extorquens CM4 7113798 YP_002421213.1 CDS rplB NC_011757.1 2582186 2583022 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 2582186..2583022 Methylobacterium extorquens CM4 7113799 YP_002421214.1 CDS rpsS NC_011757.1 2583028 2583306 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 2583028..2583306 Methylobacterium extorquens CM4 7113800 YP_002421215.1 CDS rplV NC_011757.1 2583308 2583691 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 2583308..2583691 Methylobacterium extorquens CM4 7113801 YP_002421216.1 CDS Mchl_2446 NC_011757.1 2583703 2584449 D KEGG: mex:Mext_2168 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; ribosomal protein S3 domain; SMART: KH domain protein; 30S ribosomal protein S3 2583703..2584449 Methylobacterium extorquens CM4 7113802 YP_002421217.1 CDS rplP NC_011757.1 2584483 2584896 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 2584483..2584896 Methylobacterium extorquens CM4 7113803 YP_002421218.1 CDS Mchl_2448 NC_011757.1 2584909 2585124 D PFAM: ribosomal protein L29; KEGG: mpo:Mpop_2131 ribosomal protein L29; 50S ribosomal protein L29 2584909..2585124 Methylobacterium extorquens CM4 7113804 YP_002421219.1 CDS rpsQ NC_011757.1 2585136 2585402 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 2585136..2585402 Methylobacterium extorquens CM4 7113805 YP_002421220.1 CDS Mchl_2450 NC_011757.1 2585814 2587202 D PFAM: ATPase AAA; SMART: AAA ATPase; KEGG: mex:Mext_2172 ATPase central domain-containing protein; ATPase AAA 2585814..2587202 Methylobacterium extorquens CM4 7113806 YP_002421221.1 CDS Mchl_2451 NC_011757.1 2587414 2587872 R PFAM: NUDIX hydrolase; KEGG: mex:Mext_2173 NUDIX hydrolase; NUDIX hydrolase complement(2587414..2587872) Methylobacterium extorquens CM4 7113807 YP_002421222.1 CDS Mchl_2452 NC_011757.1 2588118 2588582 R PFAM: regulatory protein MarR; transcriptional regulator PadR family protein; KEGG: mex:Mext_2174 regulatory protein MarR; MarR family transcriptional regulator complement(2588118..2588582) Methylobacterium extorquens CM4 7113808 YP_002421223.1 CDS rplQ NC_011757.1 2588872 2589288 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(2588872..2589288) Methylobacterium extorquens CM4 7113809 YP_002421224.1 CDS Mchl_2454 NC_011757.1 2589523 2590542 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(2589523..2590542) Methylobacterium extorquens CM4 7113810 YP_002421225.1 CDS Mchl_2455 NC_011757.1 2590641 2591522 R PFAM: beta-lactamase; KEGG: mex:Mext_2177 beta-lactamase domain-containing protein; beta-lactamase complement(2590641..2591522) Methylobacterium extorquens CM4 7113811 YP_002421226.1 CDS Mchl_2456 NC_011757.1 2591560 2591949 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(2591560..2591949) Methylobacterium extorquens CM4 7113812 YP_002421227.1 CDS rpsM NC_011757.1 2592120 2592488 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(2592120..2592488) Methylobacterium extorquens CM4 7113813 YP_002421228.1 CDS adk NC_011757.1 2592792 2593394 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(2592792..2593394) Methylobacterium extorquens CM4 7113814 YP_002421229.1 CDS Mchl_2459 NC_011757.1 2593565 2594908 R TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: mex:Mext_2181 preprotein translocase, SecY subunit; preprotein translocase subunit SecY complement(2593565..2594908) Methylobacterium extorquens CM4 7113815 YP_002421230.1 CDS rplO NC_011757.1 2595023 2595532 R late assembly protein; 50S ribosomal protein L15 complement(2595023..2595532) Methylobacterium extorquens CM4 7113816 YP_002421231.1 CDS rpmD NC_011757.1 2595546 2595740 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(2595546..2595740) Methylobacterium extorquens CM4 7114362 YP_002421232.1 CDS rpsE NC_011757.1 2595752 2596330 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(2595752..2596330) Methylobacterium extorquens CM4 7114447 YP_002421233.1 CDS rplR NC_011757.1 2596421 2596783 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(2596421..2596783) Methylobacterium extorquens CM4 7114448 YP_002421234.1 CDS rplF NC_011757.1 2596795 2597328 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(2596795..2597328) Methylobacterium extorquens CM4 7114449 YP_002421235.1 CDS Mchl_2465 NC_011757.1 2597345 2597740 R PFAM: ribosomal protein S8; KEGG: mex:Mext_2187 ribosomal protein S8; 30S ribosomal protein S8 complement(2597345..2597740) Methylobacterium extorquens CM4 7114450 YP_002421236.1 CDS rpsN NC_011757.1 2597753 2598058 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(2597753..2598058) Methylobacterium extorquens CM4 7114451 YP_002421237.1 CDS Mchl_2467 NC_011757.1 2598100 2598666 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(2598100..2598666) Methylobacterium extorquens CM4 7114452 YP_002421238.1 CDS rplX NC_011757.1 2598659 2598973 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(2598659..2598973) Methylobacterium extorquens CM4 7114453 YP_002421239.1 CDS rplN NC_011757.1 2598973 2599332 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(2598973..2599332) Methylobacterium extorquens CM4 7114454 YP_002421240.1 CDS Mchl_2470 NC_011757.1 2599695 2599976 R KEGG: mex:Mext_2192 hypothetical protein; hypothetical protein complement(2599695..2599976) Methylobacterium extorquens CM4 7114455 YP_002421241.1 CDS Mchl_2471 NC_011757.1 2600285 2600818 R PFAM: nuclease (SNase domain protein); KEGG: mex:Mext_2193 nuclease; nuclease complement(2600285..2600818) Methylobacterium extorquens CM4 7114456 YP_002421242.1 CDS Mchl_2472 NC_011757.1 2601421 2601801 D KEGG: mex:Mext_2194 hypothetical protein; hypothetical protein 2601421..2601801 Methylobacterium extorquens CM4 7114457 YP_002421243.1 CDS Mchl_2473 NC_011757.1 2601915 2603162 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_2195 diguanylate cyclase; diguanylate cyclase 2601915..2603162 Methylobacterium extorquens CM4 7114458 YP_002421244.1 CDS Mchl_2474 NC_011757.1 2603253 2604323 D KEGG: mex:Mext_2196 hypothetical protein; hypothetical protein 2603253..2604323 Methylobacterium extorquens CM4 7114459 YP_002421245.1 CDS Mchl_2475 NC_011757.1 2604388 2604900 R KEGG: mex:Mext_2197 hypothetical protein; hypothetical protein complement(2604388..2604900) Methylobacterium extorquens CM4 7114460 YP_002421246.1 CDS Mchl_2476 NC_011757.1 2605058 2605186 R KEGG: mex:Mext_2198 hypothetical protein; hypothetical protein complement(2605058..2605186) Methylobacterium extorquens CM4 7114461 YP_002421247.1 CDS Mchl_2477 NC_011757.1 2605235 2605531 R KEGG: mex:Mext_2199 hypothetical protein; hypothetical protein complement(2605235..2605531) Methylobacterium extorquens CM4 7114462 YP_002421248.1 CDS Mchl_2478 NC_011757.1 2605815 2606072 D KEGG: mex:Mext_2200 hypothetical protein; hypothetical protein 2605815..2606072 Methylobacterium extorquens CM4 7114463 YP_002421249.1 CDS Mchl_2479 NC_011757.1 2606329 2606598 D KEGG: mex:Mext_2202 hypothetical protein; hypothetical protein 2606329..2606598 Methylobacterium extorquens CM4 7114464 YP_002421250.1 CDS Mchl_2480 NC_011757.1 2606945 2608132 R PFAM: monooxygenase FAD-binding; KEGG: mex:Mext_2203 monooxygenase FAD-binding; FAD-binding monooxygenase complement(2606945..2608132) Methylobacterium extorquens CM4 7114466 YP_002421251.1 CDS Mchl_2481 NC_011757.1 2608149 2608415 R KEGG: mex:Mext_2204 hypothetical protein; hypothetical protein complement(2608149..2608415) Methylobacterium extorquens CM4 7114467 YP_002421252.1 CDS Mchl_2482 NC_011757.1 2608632 2609486 D TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: mex:Mext_2206 methionine aminopeptidase, type I; methionine aminopeptidase, type I 2608632..2609486 Methylobacterium extorquens CM4 7114468 YP_002421253.1 CDS Mchl_2483 NC_011757.1 2609501 2610247 D PFAM: DNA repair protein RadC; KEGG: mex:Mext_2207 DNA repair protein RadC; DNA repair protein RadC 2609501..2610247 Methylobacterium extorquens CM4 7114469 YP_002421254.1 CDS Mchl_2484 NC_011757.1 2610563 2612002 D PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mex:Mext_2208 hypothetical protein; hypothetical protein 2610563..2612002 Methylobacterium extorquens CM4 7114470 YP_002421255.1 CDS Mchl_2485 NC_011757.1 2612110 2613054 D PFAM: protein of unknown function DUF403; KEGG: mex:Mext_2209 hypothetical protein; hypothetical protein 2612110..2613054 Methylobacterium extorquens CM4 7114471 YP_002421256.1 CDS Mchl_2486 NC_011757.1 2613155 2613409 R KEGG: mex:Mext_2210 hypothetical protein; hypothetical protein complement(2613155..2613409) Methylobacterium extorquens CM4 7114472 YP_002421257.1 CDS Mchl_2487 NC_011757.1 2613450 2613899 R KEGG: mex:Mext_2211 hypothetical protein; hypothetical protein complement(2613450..2613899) Methylobacterium extorquens CM4 7114473 YP_002421258.1 CDS Mchl_2488 NC_011757.1 2613907 2614284 R KEGG: mpo:Mpop_2169 hypothetical protein; hypothetical protein complement(2613907..2614284) Methylobacterium extorquens CM4 7114474 YP_002421259.1 CDS Mchl_2489 NC_011757.1 2614438 2614842 R KEGG: mex:Mext_2213 hypothetical protein; hypothetical protein complement(2614438..2614842) Methylobacterium extorquens CM4 7114475 YP_002421260.1 CDS Mchl_2490 NC_011757.1 2615369 2616259 D PFAM: transglutaminase; transglutaminase domain protein; KEGG: mex:Mext_2214 transglutaminase domain-containing protein; transglutaminase 2615369..2616259 Methylobacterium extorquens CM4 7114476 YP_002421261.1 CDS Mchl_2491 NC_011757.1 2616383 2617129 D KEGG: mex:Mext_2215 proteasome-type protease; proteasome-type protease 2616383..2617129 Methylobacterium extorquens CM4 7114477 YP_002421262.1 CDS Mchl_2492 NC_011757.1 2617244 2617951 R PFAM: silent information regulator protein Sir2; KEGG: mex:Mext_2216 silent information regulator protein Sir2; silent information regulator protein Sir2 complement(2617244..2617951) Methylobacterium extorquens CM4 7114478 YP_002421263.1 CDS Mchl_2493 NC_011757.1 2617960 2619174 R PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: mpo:Mpop_2174 protein of unknown function DUF21; hypothetical protein complement(2617960..2619174) Methylobacterium extorquens CM4 7114479 YP_002421264.1 CDS Mchl_2494 NC_011757.1 2619541 2622720 D PFAM: glycosyl transferase family 2; KEGG: mex:Mext_2218 glycosyl transferase; family 2 glycosyl transferase 2619541..2622720 Methylobacterium extorquens CM4 7114480 YP_002421265.1 CDS Mchl_2495 NC_011757.1 2622812 2623042 D KEGG: mex:Mext_2219 hypothetical protein; hypothetical protein 2622812..2623042 Methylobacterium extorquens CM4 7114481 YP_002421266.1 CDS Mchl_2496 NC_011757.1 2623165 2623416 R KEGG: mex:Mext_2220 hypothetical protein; hypothetical protein complement(2623165..2623416) Methylobacterium extorquens CM4 7114482 YP_002421267.1 CDS Mchl_2497 NC_011757.1 2623700 2625166 R KEGG: mex:Mext_2221 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do complement(2623700..2625166) Methylobacterium extorquens CM4 7114483 YP_002421268.1 CDS Mchl_2498 NC_011757.1 2625511 2626263 R KEGG: mex:Mext_2222 hypothetical protein; hypothetical protein complement(2625511..2626263) Methylobacterium extorquens CM4 7114484 YP_002421269.1 CDS Mchl_2499 NC_011757.1 2626428 2626784 R TIGRFAM: phasin; KEGG: mex:Mext_2223 phasin; phasin complement(2626428..2626784) Methylobacterium extorquens CM4 7114485 YP_002421270.1 CDS Mchl_2500 NC_011757.1 2627013 2628317 R PFAM: glycosyl transferase group 1; KEGG: mex:Mext_2224 glycosyl transferase group 1; group 1 glycosyl transferase complement(2627013..2628317) Methylobacterium extorquens CM4 7114486 YP_002421271.1 CDS Mchl_2501 NC_011757.1 2628532 2629803 D PFAM: glycosyl transferase group 1; KEGG: mex:Mext_2225 glycosyl transferase group 1; group 1 glycosyl transferase 2628532..2629803 Methylobacterium extorquens CM4 7114487 YP_002421272.1 CDS Mchl_2502 NC_011757.1 2629891 2630070 D KEGG: mex:Mext_2226 hypothetical protein; hypothetical protein 2629891..2630070 Methylobacterium extorquens CM4 7114488 YP_002421273.1 CDS Mchl_2503 NC_011757.1 2630105 2632522 R KEGG: mex:Mext_2227 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(2630105..2632522) Methylobacterium extorquens CM4 7114489 YP_002421274.1 CDS Mchl_2504 NC_011757.1 2632669 2634357 R PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_2228 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain-containing protein complement(2632669..2634357) Methylobacterium extorquens CM4 7114490 YP_002421275.1 CDS Mchl_2505 NC_011757.1 2634520 2635443 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_2229 hypothetical protein; hypothetical protein complement(2634520..2635443) Methylobacterium extorquens CM4 7114491 YP_002421276.1 CDS Mchl_2506 NC_011757.1 2635518 2636465 D PFAM: ribonuclease BN; KEGG: mex:Mext_2230 ribonuclease BN; ribonuclease BN 2635518..2636465 Methylobacterium extorquens CM4 7114492 YP_002421277.1 CDS Mchl_2507 NC_011757.1 2636377 2637417 R KEGG: mex:Mext_2231 hypothetical protein; hypothetical protein complement(2636377..2637417) Methylobacterium extorquens CM4 7114493 YP_002421278.1 CDS Mchl_2508 NC_011757.1 2637604 2639013 R KEGG: mex:Mext_2232 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; sulfate adenylyltransferase, large subunit complement(2637604..2639013) Methylobacterium extorquens CM4 7114494 YP_002421279.1 CDS Mchl_2509 NC_011757.1 2639013 2639942 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(2639013..2639942) Methylobacterium extorquens CM4 7114495 YP_002421280.1 CDS Mchl_2510 NC_011757.1 2639942 2640751 R KEGG: mex:Mext_2234 adenylylsulfate reductase, thioredoxin dependent; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase; adenylylsulfate reductase, thioredoxin dependent complement(2639942..2640751) Methylobacterium extorquens CM4 7114496 YP_002421281.1 CDS Mchl_2511 NC_011757.1 2641016 2641519 D PFAM: regulatory protein AsnC/Lrp family; KEGG: mex:Mext_2235 AsnC/Lrp family regulatory protein; AsnC family transcriptional regulator 2641016..2641519 Methylobacterium extorquens CM4 7114497 YP_002421282.1 CDS Mchl_2512 NC_011757.1 2641620 2643407 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: mex:Mext_2236 flavodoxin/nitric oxide synthase; flavodoxin/nitric oxide synthase 2641620..2643407 Methylobacterium extorquens CM4 7114498 YP_002421283.1 CDS Mchl_2513 NC_011757.1 2643601 2645439 D hemoprotein; NADPH dependent; with the subunit alpha (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 2643601..2645439 Methylobacterium extorquens CM4 7114499 YP_002421284.1 CDS Mchl_2514 NC_011757.1 2645503 2647683 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2239 TonB-dependent receptor plug; TonB-dependent siderophore receptor complement(2645503..2647683) Methylobacterium extorquens CM4 7114500 YP_002421285.1 CDS panC NC_011757.1 2648016 2648873 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(2648016..2648873) Methylobacterium extorquens CM4 7114501 YP_002421286.1 CDS Mchl_2516 NC_011757.1 2648948 2649307 R KEGG: mex:Mext_2241 hypothetical protein; hypothetical protein complement(2648948..2649307) Methylobacterium extorquens CM4 7114502 YP_002421287.1 CDS Mchl_2517 NC_011757.1 2649380 2649985 R PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: mex:Mext_2242 helix-turn-helix domain-containing protein; XRE family transcriptional regulator complement(2649380..2649985) Methylobacterium extorquens CM4 7114503 YP_002421288.1 CDS Mchl_2518 NC_011757.1 2650362 2650931 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mex:Mext_2243 single-strand binding protein; single-strand binding protein complement(2650362..2650931) Methylobacterium extorquens CM4 7114504 YP_002421289.1 CDS Mchl_2519 NC_011757.1 2651166 2652182 R PFAM: alcohol dehydrogenase zinc-binding domain protein; KEGG: mex:Mext_2244 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein complement(2651166..2652182) Methylobacterium extorquens CM4 7114505 YP_002421290.1 CDS Mchl_2520 NC_011757.1 2652275 2652682 D KEGG: mex:Mext_2245 hypothetical protein; hypothetical protein 2652275..2652682 Methylobacterium extorquens CM4 7114506 YP_002421291.1 CDS Mchl_2521 NC_011757.1 2652735 2653301 R KEGG: mex:Mext_2246 hypothetical protein; hypothetical protein complement(2652735..2653301) Methylobacterium extorquens CM4 7114507 YP_002421292.1 CDS Mchl_2522 NC_011757.1 2653531 2654304 D KEGG: mex:Mext_2247 hypothetical protein; hypothetical protein 2653531..2654304 Methylobacterium extorquens CM4 7114508 YP_002421293.1 CDS Mchl_2523 NC_011757.1 2654470 2655588 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mex:Mext_2248 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase/NADH oxidase complement(2654470..2655588) Methylobacterium extorquens CM4 7114509 YP_002421294.1 CDS Mchl_2524 NC_011757.1 2655758 2656747 D PFAM: glutathione S-transferase domain; KEGG: mex:Mext_2249 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein 2655758..2656747 Methylobacterium extorquens CM4 7114510 YP_002421295.1 CDS Mchl_2525 NC_011757.1 2656819 2657334 D KEGG: mex:Mext_2250 hypothetical protein; hypothetical protein 2656819..2657334 Methylobacterium extorquens CM4 7114511 YP_002421296.1 CDS Mchl_2526 NC_011757.1 2657570 2658478 D PFAM: thioredoxin domain; KEGG: mex:Mext_2251 thioredoxin domain-containing protein; thioredoxin domain 2657570..2658478 Methylobacterium extorquens CM4 7114512 YP_002421297.1 CDS Mchl_2527 NC_011757.1 2658564 2659232 D PFAM: peptidase S16; KEGG: mex:Mext_2252 peptidase S16 lon domain-containing protein; peptidase S16 2658564..2659232 Methylobacterium extorquens CM4 7114513 YP_002421298.1 CDS Mchl_2528 NC_011757.1 2659290 2659496 D PFAM: protein of unknown function DUF343; KEGG: mex:Mext_2253 hypothetical protein; hypothetical protein 2659290..2659496 Methylobacterium extorquens CM4 7114514 YP_002421299.1 CDS Mchl_2529 NC_011757.1 2659595 2660554 R PFAM: import inner membrane translocase subunit Tim44; KEGG: mex:Mext_2254 import inner membrane translocase subunit Tim44; import inner membrane translocase subunit Tim44 complement(2659595..2660554) Methylobacterium extorquens CM4 7114515 YP_002421300.1 CDS Mchl_2530 NC_011757.1 2660755 2661867 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; KEGG: mex:Mext_2255 PAS sensor protein; PAS/PAC sensor signal transduction histidine kinase complement(2660755..2661867) Methylobacterium extorquens CM4 7114516 YP_002421301.1 CDS Mchl_2531 NC_011757.1 2661989 2662693 R PFAM: cysteine peptidase; KEGG: mex:Mext_2256 cysteine peptidase; cysteine peptidase complement(2661989..2662693) Methylobacterium extorquens CM4 7114517 YP_002421302.1 CDS Mchl_2532 NC_011757.1 2662900 2663559 R PFAM: cysteine peptidase; KEGG: mex:Mext_2257 cysteine peptidase; cysteine peptidase complement(2662900..2663559) Methylobacterium extorquens CM4 7114518 YP_002421303.1 CDS Mchl_2533 NC_011757.1 2664028 2664651 R PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_2258 type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(2664028..2664651) Methylobacterium extorquens CM4 7114519 YP_002421304.1 CDS Mchl_2534 NC_011757.1 2664860 2665480 R PFAM: protein of unknown function DUF1457; KEGG: mex:Mext_2259 hypothetical protein; hypothetical protein complement(2664860..2665480) Methylobacterium extorquens CM4 7114520 YP_002421305.1 CDS Mchl_2535 NC_011757.1 2665721 2666545 D PFAM: rhomboid family protein; KEGG: mex:Mext_2260 rhomboid family protein; rhomboid family protein 2665721..2666545 Methylobacterium extorquens CM4 7114521 YP_002421306.1 CDS Mchl_2536 NC_011757.1 2666787 2667674 D KEGG: mex:Mext_2261 hypothetical protein; hypothetical protein 2666787..2667674 Methylobacterium extorquens CM4 7114522 YP_002421307.1 CDS Mchl_2537 NC_011757.1 2668034 2668465 D PFAM: CBS domain containing protein; KEGG: mex:Mext_2262 CBS domain-containing protein; signal transduction protein with CBS domains 2668034..2668465 Methylobacterium extorquens CM4 7114523 YP_002421308.1 CDS Mchl_2538 NC_011757.1 2668519 2669577 R PFAM: patatin; KEGG: mex:Mext_2263 patatin; patatin complement(2668519..2669577) Methylobacterium extorquens CM4 7114524 YP_002421309.1 CDS Mchl_2539 NC_011757.1 2669574 2669996 R PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: mex:Mext_2264 phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase complement(2669574..2669996) Methylobacterium extorquens CM4 7114525 YP_002421310.1 CDS Mchl_2540 NC_011757.1 2670016 2670825 R PFAM: GTP cyclohydrolase I; KEGG: mex:Mext_2265 GTP cyclohydrolase I; GTP cyclohydrolase I complement(2670016..2670825) Methylobacterium extorquens CM4 7114526 YP_002421311.1 CDS Mchl_2541 NC_011757.1 2671049 2671522 D PFAM: nitrogen-fixing NifU domain protein; KEGG: mex:Mext_2266 NifU domain-containing protein; nitrogen-fixing NifU domain-containing protein 2671049..2671522 Methylobacterium extorquens CM4 7114527 YP_002421312.1 CDS Mchl_2542 NC_011757.1 2671567 2671914 D PFAM: protein of unknown function DUF37; KEGG: mex:Mext_2267 hypothetical protein; hypothetical protein 2671567..2671914 Methylobacterium extorquens CM4 7115675 YP_002421313.1 CDS Mchl_2543 NC_011757.1 2672074 2672841 R PFAM: protein of unknown function UPF0005; KEGG: mpo:Mpop_2225 protein of unknown function UPF0005; hypothetical protein complement(2672074..2672841) Methylobacterium extorquens CM4 7117290 YP_002421314.1 CDS Mchl_2544 NC_011757.1 2673059 2675641 R PFAM: protein of unknown function DUF214; KEGG: mex:Mext_2269 hypothetical protein; hypothetical protein complement(2673059..2675641) Methylobacterium extorquens CM4 7117291 YP_002421315.1 CDS Mchl_2545 NC_011757.1 2675754 2677169 R PFAM: ATP-binding region ATPase domain protein; KEGG: mex:Mext_2270 ATPase domain-containing protein; histidine kinase complement(2675754..2677169) Methylobacterium extorquens CM4 7117292 YP_002421316.1 CDS Mchl_2546 NC_011757.1 2677338 2678087 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 2677338..2678087 Methylobacterium extorquens CM4 7117293 YP_002421317.1 CDS acpS NC_011757.1 2678084 2678494 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 2678084..2678494 Methylobacterium extorquens CM4 7117294 YP_002421318.1 CDS Mchl_2548 NC_011757.1 2678624 2679430 D KEGG: mex:Mext_2273 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 2678624..2679430 Methylobacterium extorquens CM4 7117295 YP_002421319.1 CDS Mchl_2549 NC_011757.1 2679491 2680261 D PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: mex:Mext_2274 ribonuclease III; ribonuclease III 2679491..2680261 Methylobacterium extorquens CM4 7117296 YP_002421320.1 CDS Mchl_2550 NC_011757.1 2680282 2681262 D TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: mex:Mext_2275 GTP-binding protein Era; GTP-binding protein Era 2680282..2681262 Methylobacterium extorquens CM4 7117297 YP_002421321.1 CDS Mchl_2551 NC_011757.1 2681456 2682382 D PFAM: methyltransferase small; KEGG: mex:Mext_2276 methyltransferase small; methyltransferase small 2681456..2682382 Methylobacterium extorquens CM4 7117298 YP_002421322.1 CDS Mchl_2552 NC_011757.1 2682379 2683107 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mex:Mext_2277 pseudouridine synthase; pseudouridine synthase 2682379..2683107 Methylobacterium extorquens CM4 7117299 YP_002421323.1 CDS Mchl_2553 NC_011757.1 2683112 2683735 R KEGG: mex:Mext_2278 hypothetical protein; hypothetical protein complement(2683112..2683735) Methylobacterium extorquens CM4 7117300 YP_002421324.1 CDS Mchl_2554 NC_011757.1 2683977 2685155 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_2279 Sel1 domain-containing protein; Sel1 domain-containing protein repeat-containing protein 2683977..2685155 Methylobacterium extorquens CM4 7117301 YP_002421325.1 CDS Mchl_2555 NC_011757.1 2685359 2686150 D KEGG: mex:Mext_2280 hypothetical protein; hypothetical protein 2685359..2686150 Methylobacterium extorquens CM4 7117302 YP_002421326.1 CDS Mchl_2556 NC_011757.1 2686361 2686666 D KEGG: mex:Mext_2281 hypothetical protein; hypothetical protein 2686361..2686666 Methylobacterium extorquens CM4 7117303 YP_002421327.1 CDS Mchl_2557 NC_011757.1 2686674 2688602 R PFAM: K potassium transporter; KEGG: mex:Mext_2282 K potassium transporter; K potassium transporter complement(2686674..2688602) Methylobacterium extorquens CM4 7117304 YP_002421328.1 CDS Mchl_2558 NC_011757.1 2688802 2689458 R KEGG: mex:Mext_2283 hypothetical protein; hypothetical protein complement(2688802..2689458) Methylobacterium extorquens CM4 7117305 YP_002421329.1 CDS Mchl_2559 NC_011757.1 2689486 2690073 R PFAM: NUDIX hydrolase; KEGG: mex:Mext_2284 NUDIX hydrolase; NUDIX hydrolase complement(2689486..2690073) Methylobacterium extorquens CM4 7117306 YP_002421330.1 CDS Mchl_2560 NC_011757.1 2690219 2691907 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_2285 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2690219..2691907) Methylobacterium extorquens CM4 7117307 YP_002421331.1 CDS Mchl_2561 NC_011757.1 2692254 2693459 R PFAM: protein of unknown function DUF610 YibQ; KEGG: mex:Mext_2286 protein of unknown function DUF610 YibQ; hypothetical protein complement(2692254..2693459) Methylobacterium extorquens CM4 7117308 YP_002421332.1 CDS Mchl_2562 NC_011757.1 2693611 2694933 R KEGG: mex:Mext_2287 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease complement(2693611..2694933) Methylobacterium extorquens CM4 7117309 YP_002421333.1 CDS Mchl_2563 NC_011757.1 2694933 2696333 R PFAM: peptidase M23; KEGG: mex:Mext_2288 peptidase M23B; peptidase M23 complement(2694933..2696333) Methylobacterium extorquens CM4 7117310 YP_002421334.1 CDS Mchl_2564 NC_011757.1 2696330 2696827 R SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase complement(2696330..2696827) Methylobacterium extorquens CM4 7117311 YP_002421335.1 CDS Mchl_2565 NC_011757.1 2697075 2698385 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_2290 general substrate transporter; general substrate transporter 2697075..2698385 Methylobacterium extorquens CM4 7117312 YP_002421336.1 CDS Mchl_2566 NC_011757.1 2698666 2700615 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_2291 diguanylate cyclase; diguanylate cyclase/phosphodiesterase 2698666..2700615 Methylobacterium extorquens CM4 7117313 YP_002421337.1 CDS Mchl_2567 NC_011757.1 2700620 2701246 R PFAM: DSBA oxidoreductase; KEGG: mex:Mext_2292 DsbA oxidoreductase; DSBA oxidoreductase complement(2700620..2701246) Methylobacterium extorquens CM4 7117314 YP_002421338.1 CDS Mchl_2568 NC_011757.1 2701421 2702662 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 2701421..2702662 Methylobacterium extorquens CM4 7117315 YP_002421339.1 CDS Mchl_2570 NC_011757.1 2703238 2703903 R KEGG: mex:Mext_2295 hypothetical protein; hypothetical protein complement(2703238..2703903) Methylobacterium extorquens CM4 7117317 YP_002421340.1 CDS Mchl_2571 NC_011757.1 2704099 2704800 R TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: mex:Mext_2296 phosphoglycolate phosphatase; phosphoglycolate phosphatase complement(2704099..2704800) Methylobacterium extorquens CM4 7117318 YP_002421341.1 CDS Mchl_2572 NC_011757.1 2704984 2705493 D KEGG: mex:Mext_2297 hypothetical protein; hypothetical protein 2704984..2705493 Methylobacterium extorquens CM4 7117319 YP_002421342.1 CDS Mchl_2573 NC_011757.1 2705674 2706384 D KEGG: mex:Mext_2298 ribose 5-phosphate isomerase; TIGRFAM: ribose 5-phosphate isomerase; PFAM: ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 2705674..2706384 Methylobacterium extorquens CM4 7117320 YP_002421343.1 CDS Mchl_2574 NC_011757.1 2706426 2707022 D KEGG: mex:Mext_2299 hypothetical protein; hypothetical protein 2706426..2707022 Methylobacterium extorquens CM4 7117321 YP_002421344.1 CDS Mchl_2575 NC_011757.1 2707077 2708363 D PFAM: O-antigen polymerase; KEGG: mex:Mext_2300 O-antigen polymerase; O-antigen polymerase 2707077..2708363 Methylobacterium extorquens CM4 7117322 YP_002421345.1 CDS Mchl_2576 NC_011757.1 2708375 2709760 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: mex:Mext_2301 pyridine nucleotide-disulphide oxidoreductase dimerisation region; pyridine nucleotide-disulfide oxidoreductase dimerisation region 2708375..2709760 Methylobacterium extorquens CM4 7117323 YP_002421346.1 CDS Mchl_2577 NC_011757.1 2709762 2711171 R KEGG: mex:Mext_2302 TRAP-type uncharacterized transport system periplasmic component-like protein; TRAP-type transporter periplasmic component-like protein complement(2709762..2711171) Methylobacterium extorquens CM4 7117324 YP_002421347.1 CDS Mchl_2578 NC_011757.1 2711420 2711902 D KEGG: mex:Mext_2303 hypothetical protein; hypothetical protein 2711420..2711902 Methylobacterium extorquens CM4 7117325 YP_002421348.1 CDS Mchl_2579 NC_011757.1 2711988 2712419 D PFAM: OsmC family protein; KEGG: mex:Mext_2304 OsmC family protein; OsmC family protein 2711988..2712419 Methylobacterium extorquens CM4 7117326 YP_002421349.1 CDS Mchl_2580 NC_011757.1 2712526 2713737 D KEGG: mex:Mext_2305 radical SAM domain-containing protein; radical SAM domain-containing protein 2712526..2713737 Methylobacterium extorquens CM4 7117327 YP_002421350.1 CDS Mchl_2581 NC_011757.1 2713737 2715194 D PFAM: uracil-DNA glycosylase superfamily; KEGG: mex:Mext_2306 uracil-DNA glycosylase superfamily protein; uracil-DNA glycosylase superfamily protein 2713737..2715194 Methylobacterium extorquens CM4 7117328 YP_002421351.1 CDS Mchl_2582 NC_011757.1 2715464 2716636 D PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_2307 alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 2715464..2716636 Methylobacterium extorquens CM4 7117329 YP_002421352.1 CDS Mchl_2583 NC_011757.1 2716779 2717363 D KEGG: mex:Mext_2308 hypothetical protein; hypothetical protein 2716779..2717363 Methylobacterium extorquens CM4 7117330 YP_002421353.1 CDS Mchl_2584 NC_011757.1 2717421 2719118 R KEGG: mex:Mext_2309 hypothetical protein; hypothetical protein complement(2717421..2719118) Methylobacterium extorquens CM4 7117331 YP_002421354.1 CDS Mchl_2585 NC_011757.1 2719115 2720233 R KEGG: mex:Mext_2310 hypothetical protein; hypothetical protein complement(2719115..2720233) Methylobacterium extorquens CM4 7117332 YP_002421355.1 CDS Mchl_2586 NC_011757.1 2720413 2721075 D PFAM: HpcH/HpaI aldolase; KEGG: mex:Mext_2311 HpcH/HpaI aldolase; HpcH/HpaI aldolase 2720413..2721075 Methylobacterium extorquens CM4 7117333 YP_002421356.1 CDS Mchl_2587 NC_011757.1 2721114 2721701 D PFAM: glutathione S-transferase domain; KEGG: mex:Mext_2312 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein 2721114..2721701 Methylobacterium extorquens CM4 7117334 YP_002421357.1 CDS Mchl_2588 NC_011757.1 2721809 2722114 D KEGG: mex:Mext_2313 hypothetical protein; hypothetical protein 2721809..2722114 Methylobacterium extorquens CM4 7117335 YP_002421358.1 CDS Mchl_2589 NC_011757.1 2722287 2723279 D PFAM: catalase; KEGG: mex:Mext_2314 catalase domain-containing protein; catalase 2722287..2723279 Methylobacterium extorquens CM4 7117336 YP_002421359.1 CDS Mchl_2590 NC_011757.1 2723308 2723571 R KEGG: mex:Mext_2315 hypothetical protein; hypothetical protein complement(2723308..2723571) Methylobacterium extorquens CM4 7117337 YP_002421360.1 CDS Mchl_2591 NC_011757.1 2723712 2724317 R PFAM: flavin reductase domain protein FMN-binding; KEGG: mex:Mext_2316 hypothetical protein; flavin reductase domain-containing FMN-binding protein complement(2723712..2724317) Methylobacterium extorquens CM4 7117338 YP_002421361.1 CDS Mchl_2592 NC_011757.1 2724328 2724915 R PFAM: nitroreductase; KEGG: mex:Mext_2317 nitroreductase; nitroreductase complement(2724328..2724915) Methylobacterium extorquens CM4 7117339 YP_002421362.1 CDS Mchl_2593 NC_011757.1 2725073 2725993 D KEGG: mex:Mext_2318 hypothetical protein; hypothetical protein 2725073..2725993 Methylobacterium extorquens CM4 7117340 YP_002421363.1 CDS Mchl_2594 NC_011757.1 2725999 2726391 D KEGG: mex:Mext_2319 hypothetical protein; hypothetical protein 2725999..2726391 Methylobacterium extorquens CM4 7117341 YP_002421364.1 CDS Mchl_2595 NC_011757.1 2726596 2726727 R KEGG: mpo:Mpop_2274 hypothetical protein; hypothetical protein complement(2726596..2726727) Methylobacterium extorquens CM4 7117342 YP_002421365.1 CDS Mchl_2596 NC_011757.1 2726854 2728248 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: mex:Mext_2320 regulatory protein GntR HTH; GntR family transcriptional regulator 2726854..2728248 Methylobacterium extorquens CM4 7117343 YP_002421366.1 CDS thrS NC_011757.1 2730621 2732648 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(2730621..2732648) Methylobacterium extorquens CM4 7117345 YP_002421367.1 CDS Mchl_2599 NC_011757.1 2732973 2733743 R KEGG: mex:Mext_2322 hypothetical protein; hypothetical protein complement(2732973..2733743) Methylobacterium extorquens CM4 7117346 YP_002421368.1 CDS Mchl_2600 NC_011757.1 2733722 2734639 R PFAM: ROK family protein; KEGG: mex:Mext_2323 ROK family protein; ROK family protein complement(2733722..2734639) Methylobacterium extorquens CM4 7117347 YP_002421369.1 CDS Mchl_2601 NC_011757.1 2734647 2736044 R PFAM: sodium:dicarboxylate symporter; KEGG: mex:Mext_2324 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter complement(2734647..2736044) Methylobacterium extorquens CM4 7117348 YP_002421370.1 CDS ileS NC_011757.1 2736527 2739502 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 2736527..2739502 Methylobacterium extorquens CM4 7117349 YP_002421371.1 CDS Mchl_2603 NC_011757.1 2739499 2740014 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 2739499..2740014 Methylobacterium extorquens CM4 7117350 YP_002421372.1 CDS Mchl_2604 NC_011757.1 2740177 2740881 D KEGG: mex:Mext_2327 hypothetical protein; hypothetical protein 2740177..2740881 Methylobacterium extorquens CM4 7117351 YP_002421373.1 CDS Mchl_2605 NC_011757.1 2741074 2742456 D PFAM: peptidase M16 domain protein; KEGG: mex:Mext_2328 peptidase M16 domain-containing protein; peptidase M16 domain-containing protein 2741074..2742456 Methylobacterium extorquens CM4 7117352 YP_002421374.1 CDS Mchl_2606 NC_011757.1 2742528 2743811 D PFAM: peptidase M16 domain protein; KEGG: mex:Mext_2329 peptidase M16 domain-containing protein; peptidase M16 domain-containing protein 2742528..2743811 Methylobacterium extorquens CM4 7117353 YP_002421375.1 CDS Mchl_2607 NC_011757.1 2744022 2744225 D PFAM: YcfA family protein; KEGG: nha:Nham_0566 YcfA-like; YcfA family protein 2744022..2744225 Methylobacterium extorquens CM4 7117354 YP_002421376.1 CDS Mchl_2608 NC_011757.1 2744263 2744670 D PFAM: CopG domain protein DNA-binding domain protein; protein of unknown function UPF0150; KEGG: nha:Nham_0567 hypothetical protein; hypothetical protein 2744263..2744670 Methylobacterium extorquens CM4 7117355 YP_002421377.1 CDS Mchl_2609 NC_011757.1 2744753 2745685 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_2330 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2744753..2745685 Methylobacterium extorquens CM4 7117356 YP_002421378.1 CDS Mchl_2610 NC_011757.1 2745855 2746628 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: mex:Mext_2331 oxidoreductase FAD/NAD(P)-binding subunit; oxidoreductase FAD/NAD(P)-binding domain-containing protein 2745855..2746628 Methylobacterium extorquens CM4 7117357 YP_002421379.1 CDS Mchl_2611 NC_011757.1 2746923 2747600 D TIGRFAM: dethiobiotin synthase; KEGG: mex:Mext_2332 dethiobiotin synthase; dethiobiotin synthase 2746923..2747600 Methylobacterium extorquens CM4 7117358 YP_002421380.1 CDS Mchl_2612 NC_011757.1 2747607 2747966 R KEGG: mex:Mext_2333 PRC-barrel; PRC-barrel complement(2747607..2747966) Methylobacterium extorquens CM4 7117359 YP_002421381.1 CDS Mchl_2613 NC_011757.1 2748001 2748420 R PFAM: response regulator receiver; KEGG: mex:Mext_2334 response regulator receiver; response regulator receiver protein complement(2748001..2748420) Methylobacterium extorquens CM4 7117360 YP_002421382.1 CDS Mchl_2614 NC_011757.1 2748688 2749362 D PFAM: protein of unknown function DUF1275; KEGG: mex:Mext_2335 hypothetical protein; hypothetical protein 2748688..2749362 Methylobacterium extorquens CM4 7117361 YP_002421383.1 CDS Mchl_2615 NC_011757.1 2749380 2750387 D SMART: hypothetical protein; KEGG: mex:Mext_2336 WD-40 repeat-containing protein; hypothetical protein 2749380..2750387 Methylobacterium extorquens CM4 7117362 YP_002421384.1 CDS Mchl_2616 NC_011757.1 2750398 2750658 D KEGG: mex:Mext_2337 hypothetical protein; hypothetical protein 2750398..2750658 Methylobacterium extorquens CM4 7117363 YP_002421385.1 CDS Mchl_2617 NC_011757.1 2750725 2751255 D KEGG: mex:Mext_2338 hypothetical protein; hypothetical protein 2750725..2751255 Methylobacterium extorquens CM4 7117364 YP_002421386.1 CDS Mchl_2618 NC_011757.1 2751385 2752617 D KEGG: mex:Mext_2339 hypothetical protein; hypothetical protein 2751385..2752617 Methylobacterium extorquens CM4 7117365 YP_002421387.1 CDS Mchl_2619 NC_011757.1 2752622 2753062 R PFAM: protein of unknown function DUF1025; KEGG: mex:Mext_2340 hypothetical protein; hypothetical protein complement(2752622..2753062) Methylobacterium extorquens CM4 7117366 YP_002421388.1 CDS Mchl_2620 NC_011757.1 2753059 2753805 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_2341 pyrimidine 5'-nucleotidase; pyrimidine 5'-nucleotidase complement(2753059..2753805) Methylobacterium extorquens CM4 7117367 YP_002421389.1 CDS Mchl_2621 NC_011757.1 2753893 2754789 R TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: mex:Mext_2342 acetylglutamate kinase; acetylglutamate kinase complement(2753893..2754789) Methylobacterium extorquens CM4 7117368 YP_002421390.1 CDS Mchl_2622 NC_011757.1 2755189 2755413 D KEGG: mex:Mext_2343 hypothetical protein; hypothetical protein 2755189..2755413 Methylobacterium extorquens CM4 7117369 YP_002421391.1 CDS Mchl_2623 NC_011757.1 2755436 2756212 R PFAM: MOSC domain containing protein; KEGG: mex:Mext_2344 MOSC domain-containing protein; MOSC domain-containing protein complement(2755436..2756212) Methylobacterium extorquens CM4 7117370 YP_002421392.1 CDS Mchl_2624 NC_011757.1 2756349 2757143 D PFAM: MOSC domain containing protein; KEGG: mex:Mext_2345 MOSC domain-containing protein; MOSC domain-containing protein 2756349..2757143 Methylobacterium extorquens CM4 7117372 YP_002421393.1 CDS Mchl_2625 NC_011757.1 2757372 2759996 D KEGG: mex:Mext_2346 ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA; Clp domain protein; ATPase AAA; ATPase AAA; SMART: ATPase AAA; ATP-dependent chaperone ClpB 2757372..2759996 Methylobacterium extorquens CM4 7117374 YP_002421394.1 CDS Mchl_2626 NC_011757.1 2760174 2760848 D PFAM: metallophosphoesterase; KEGG: mex:Mext_2347 metallophosphoesterase; metallophosphoesterase 2760174..2760848 Methylobacterium extorquens CM4 7117375 YP_002421395.1 CDS Mchl_2627 NC_011757.1 2760976 2762415 D PFAM: short chain fatty acid transporter; KEGG: mex:Mext_2348 short chain fatty acid transporter; short chain fatty acid transporter 2760976..2762415 Methylobacterium extorquens CM4 7117376 YP_002421396.1 CDS Mchl_2628 NC_011757.1 2762677 2763048 R PFAM: protein of unknown function DUF423; KEGG: mex:Mext_2349 hypothetical protein; hypothetical protein complement(2762677..2763048) Methylobacterium extorquens CM4 7117377 YP_002421397.1 CDS engB NC_011757.1 2763045 2763704 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(2763045..2763704) Methylobacterium extorquens CM4 7117378 YP_002421398.1 CDS Mchl_2630 NC_011757.1 2763954 2765804 R TIGRFAM: YidC translocase/secretase; PFAM: 60 kDa inner membrane insertion protein; KEGG: mex:Mext_2351 60 kDa inner membrane insertion protein; YidC translocase/secretase complement(2763954..2765804) Methylobacterium extorquens CM4 7117379 YP_002421399.1 CDS Mchl_2631 NC_011757.1 2765797 2766294 R TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: mex:Mext_2352 ribonuclease P protein component; ribonuclease P protein component complement(2765797..2766294) Methylobacterium extorquens CM4 7117380 YP_002421400.1 CDS rpmH NC_011757.1 2766370 2766504 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(2766370..2766504) Methylobacterium extorquens CM4 7117381 YP_002421401.1 CDS Mchl_2633 NC_011757.1 2767171 2767704 D PFAM: protein of unknown function DUF1465; KEGG: mex:Mext_2354 hypothetical protein; hypothetical protein 2767171..2767704 Methylobacterium extorquens CM4 7117382 YP_002421402.1 CDS Mchl_2634 NC_011757.1 2768038 2768292 R TIGRFAM: ribosomal protein L31; KEGG: mex:Mext_2355 ribosomal protein L31; 50S ribosomal protein L31 complement(2768038..2768292) Methylobacterium extorquens CM4 7117383 YP_002421403.1 CDS Mchl_2635 NC_011757.1 2768589 2770445 D KEGG: mex:Mext_2356 lipid ABC transporter ATPase/inner membrane protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: ATPase AAA; lipid A ABC exporter family, fused ATPase and inner membrane subunits 2768589..2770445 Methylobacterium extorquens CM4 7117384 YP_002421404.1 CDS Mchl_2636 NC_011757.1 2770598 2771605 D catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 2770598..2771605 Methylobacterium extorquens CM4 7117385 YP_002421405.1 CDS Mchl_2637 NC_011757.1 2771645 2772658 R PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_2360 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein complement(2771645..2772658) Methylobacterium extorquens CM4 7117386 YP_002421406.1 CDS Mchl_2638 NC_011757.1 2772659 2773654 R KEGG: mex:Mext_2361 hypothetical protein; hypothetical protein complement(2772659..2773654) Methylobacterium extorquens CM4 7117387 YP_002421407.1 CDS Mchl_2639 NC_011757.1 2773816 2774637 R PFAM: metallophosphoesterase; KEGG: mex:Mext_2362 metallophosphoesterase; metallophosphoesterase complement(2773816..2774637) Methylobacterium extorquens CM4 7117388 YP_002421408.1 CDS Mchl_2640 NC_011757.1 2774703 2775293 R PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: mex:Mext_2363 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase complement(2774703..2775293) Methylobacterium extorquens CM4 7117389 YP_002421409.1 CDS Mchl_2641 NC_011757.1 2775541 2775912 R PFAM: protein of unknown function DUF710; KEGG: mex:Mext_2364 hypothetical protein; hypothetical protein complement(2775541..2775912) Methylobacterium extorquens CM4 7117391 YP_002421410.1 CDS Mchl_2642 NC_011757.1 2775936 2776256 R KEGG: mex:Mext_2365 hypothetical protein; hypothetical protein complement(2775936..2776256) Methylobacterium extorquens CM4 7117392 YP_002421411.1 CDS Mchl_2643 NC_011757.1 2776719 2777726 D KEGG: mex:Mext_2366 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 2776719..2777726 Methylobacterium extorquens CM4 7117393 YP_002421412.1 CDS Mchl_2644 NC_011757.1 2777921 2778427 D KEGG: mex:Mext_2367 hypothetical protein; hypothetical protein 2777921..2778427 Methylobacterium extorquens CM4 7117394 YP_002421413.1 CDS Mchl_2645 NC_011757.1 2778443 2779645 D PFAM: phosphoglycerate kinase; KEGG: mex:Mext_2368 phosphoglycerate kinase; phosphoglycerate kinase 2778443..2779645 Methylobacterium extorquens CM4 7117395 YP_002421414.1 CDS Mchl_2646 NC_011757.1 2779798 2780865 D class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 2779798..2780865 Methylobacterium extorquens CM4 7117396 YP_002421415.1 CDS Mchl_2647 NC_011757.1 2780872 2781540 D PFAM: thiamine monophosphate synthase; KEGG: mex:Mext_2370 thiamine monophosphate synthase; thiamine monophosphate synthase 2780872..2781540 Methylobacterium extorquens CM4 7117397 YP_002421416.1 CDS Mchl_2648 NC_011757.1 2781642 2782685 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_2371 Sel1 domain-containing protein; Sel1 domain-containing protein repeat-containing protein 2781642..2782685 Methylobacterium extorquens CM4 7117398 YP_002421417.1 CDS Mchl_2649 NC_011757.1 2782915 2784318 D PFAM: amino acid permease-associated region; KEGG: mex:Mext_2372 amino acid permease-associated region; amino acid permease-associated protein 2782915..2784318 Methylobacterium extorquens CM4 7117399 YP_002421418.1 CDS Mchl_2650 NC_011757.1 2784329 2785852 R TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: mex:Mext_2373 carbohydrate kinase, YjeF related protein; carbohydrate kinase complement(2784329..2785852) Methylobacterium extorquens CM4 7117400 YP_002421419.1 CDS Mchl_2651 NC_011757.1 2786037 2786375 D PFAM: nitrogen regulatory protein P-II; KEGG: mrd:Mrad2831_5130 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 2786037..2786375 Methylobacterium extorquens CM4 7117401 YP_002421420.1 CDS Mchl_2652 NC_011757.1 2786462 2787391 D catalyzes the formation of glutamate from glutamine; glutaminase 2786462..2787391 Methylobacterium extorquens CM4 7117402 YP_002421421.1 CDS Mchl_2653 NC_011757.1 2787566 2788612 R PFAM: glutamine synthetase; glutamine synthetase beta-Grasp; KEGG: mex:Mext_2376 glutamate--ammonia ligase; glutamate--ammonia ligase complement(2787566..2788612) Methylobacterium extorquens CM4 7117403 YP_002421422.1 CDS Mchl_2654 NC_011757.1 2789188 2790597 D TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mex:Mext_2377 glutamine synthetase; glutamine synthetase 2789188..2790597 Methylobacterium extorquens CM4 7117404 YP_002421423.1 CDS Mchl_2655 NC_011757.1 2790730 2791308 D PFAM: NADPH-dependent FMN reductase; KEGG: mex:Mext_2378 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 2790730..2791308 Methylobacterium extorquens CM4 7117405 YP_002421424.1 CDS Mchl_2656 NC_011757.1 2791453 2791791 D KEGG: mex:Mext_2379 hypothetical protein; hypothetical protein 2791453..2791791 Methylobacterium extorquens CM4 7117406 YP_002421425.1 CDS Mchl_2657 NC_011757.1 2791950 2794316 D KEGG: mex:Mext_2380 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; ribonuclease R 2791950..2794316 Methylobacterium extorquens CM4 7117407 YP_002421426.1 CDS Mchl_2658 NC_011757.1 2794340 2794837 D PFAM: protein of unknown function DUF983; KEGG: mex:Mext_2381 hypothetical protein; hypothetical protein 2794340..2794837 Methylobacterium extorquens CM4 7117408 YP_002421427.1 CDS Mchl_2659 NC_011757.1 2794788 2795561 D PFAM: NUDIX hydrolase; KEGG: mex:Mext_2382 NUDIX hydrolase; NUDIX hydrolase 2794788..2795561 Methylobacterium extorquens CM4 7117409 YP_002421428.1 CDS Mchl_2660 NC_011757.1 2795683 2797647 D KEGG: mex:Mext_2383 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; type IV pilus assembly PilZ; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 2795683..2797647 Methylobacterium extorquens CM4 7117410 YP_002421429.1 CDS Mchl_2661 NC_011757.1 2797709 2798578 R KEGG: mex:Mext_2384 hypothetical protein; hypothetical protein complement(2797709..2798578) Methylobacterium extorquens CM4 7117411 YP_002421430.1 CDS Mchl_2662 NC_011757.1 2798585 2799763 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; hypothetical protein; KEGG: mex:Mext_2385 hypothetical protein; hypothetical protein complement(2798585..2799763) Methylobacterium extorquens CM4 7117412 YP_002421431.1 CDS Mchl_2663 NC_011757.1 2799760 2800452 R PFAM: glutathione S-transferase domain; KEGG: mex:Mext_2386 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein complement(2799760..2800452) Methylobacterium extorquens CM4 7117413 YP_002421432.1 CDS Mchl_2664 NC_011757.1 2800680 2801531 D KEGG: mex:Mext_2387 undecaprenol kinase; TIGRFAM: undecaprenol kinase; PFAM: bacitracin resistance protein BacA; undecaprenol kinase 2800680..2801531 Methylobacterium extorquens CM4 7117414 YP_002421433.1 CDS Mchl_2665 NC_011757.1 2801680 2803497 D PFAM: methylmalonyl-CoA mutase; KEGG: mex:Mext_2388 methylmalonyl-CoA mutase; methylmalonyl-CoA mutase 2801680..2803497 Methylobacterium extorquens CM4 7117415 YP_002421434.1 CDS Mchl_2666 NC_011757.1 2803605 2803997 D KEGG: mex:Mext_2389 hypothetical protein; hypothetical protein 2803605..2803997 Methylobacterium extorquens CM4 7117416 YP_002421435.1 CDS Mchl_2667 NC_011757.1 2804172 2804639 D KEGG: mex:Mext_2390 hypothetical protein; hypothetical protein 2804172..2804639 Methylobacterium extorquens CM4 7117417 YP_002421436.1 CDS Mchl_2668 NC_011757.1 2804662 2805105 R KEGG: mex:Mext_2391 hypothetical protein; hypothetical protein complement(2804662..2805105) Methylobacterium extorquens CM4 7117418 YP_002421437.1 CDS Mchl_2669 NC_011757.1 2805280 2805831 D KEGG: mex:Mext_2392 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 2805280..2805831 Methylobacterium extorquens CM4 7117419 YP_002421438.1 CDS Mchl_2670 NC_011757.1 2805965 2807023 D TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3691 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 2805965..2807023 Methylobacterium extorquens CM4 7117420 YP_002421439.1 CDS Mchl_2671 NC_011757.1 2807026 2807916 D PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3692 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 2807026..2807916 Methylobacterium extorquens CM4 7117421 YP_002421440.1 CDS Mchl_2672 NC_011757.1 2807933 2808823 D TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase; KEGG: mex:Mext_2395 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 2807933..2808823 Methylobacterium extorquens CM4 7117422 YP_002421441.1 CDS Mchl_2673 NC_011757.1 2808955 2809593 R KEGG: mex:Mext_2396 hypothetical protein; hypothetical protein complement(2808955..2809593) Methylobacterium extorquens CM4 7117423 YP_002421442.1 CDS Mchl_2674 NC_011757.1 2809684 2810553 R PFAM: secretion protein HlyD; KEGG: mex:Mext_2397 secretion protein HlyD; secretion protein HlyD complement(2809684..2810553) Methylobacterium extorquens CM4 7117424 YP_002421443.1 CDS Mchl_2675 NC_011757.1 2810576 2811028 D KEGG: mex:Mext_2412 radical SAM domain-containing protein; hypothetical protein 2810576..2811028 Methylobacterium extorquens CM4 7117425 YP_002421444.1 CDS Mchl_2676 NC_011757.1 2811033 2811269 D KEGG: mex:Mext_2413 radical SAM domain-containing protein; radical SAM domain-containing protein 2811033..2811269 Methylobacterium extorquens CM4 7117426 YP_002421445.1 CDS Mchl_2677 NC_011757.1 2811338 2812777 R PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: mex:Mext_2414 multicopper oxidase type 3; multicopper oxidase type 3 complement(2811338..2812777) Methylobacterium extorquens CM4 7117427 YP_002421446.1 CDS tig NC_011757.1 2813159 2814595 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2813159..2814595 Methylobacterium extorquens CM4 7117429 YP_002421447.1 CDS clpP NC_011757.1 2814727 2815353 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2814727..2815353 Methylobacterium extorquens CM4 7117430 YP_002421448.1 CDS clpX NC_011757.1 2815605 2816876 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2815605..2816876 Methylobacterium extorquens CM4 7117431 YP_002421449.1 CDS Mchl_2681 NC_011757.1 2817144 2819564 D KEGG: mex:Mext_2418 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16; ATPase AAA central domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; ATP-dependent protease La 2817144..2819564 Methylobacterium extorquens CM4 7117432 YP_002421450.1 CDS Mchl_2682 NC_011757.1 2820001 2820108 D KEGG: mpo:Mpop_2374 hypothetical protein; hypothetical protein 2820001..2820108 Methylobacterium extorquens CM4 7117434 YP_002421451.1 CDS Mchl_2683 NC_011757.1 2820719 2821957 D PFAM: glycosyl transferase group 1; KEGG: mex:Mext_2461 glycosyl transferase group 1; group 1 glycosyl transferase 2820719..2821957 Methylobacterium extorquens CM4 7117435 YP_002421452.1 CDS Mchl_2684 NC_011757.1 2821969 2822916 R TIGRFAM: methyltransferase; KEGG: mex:Mext_2462 hypothetical protein; methyltransferase complement(2821969..2822916) Methylobacterium extorquens CM4 7117436 YP_002421453.1 CDS Mchl_2685 NC_011757.1 2822913 2823938 R PFAM: methyltransferase small; methyltransferase type 12; KEGG: mex:Mext_2463 methyltransferase small; methyltransferase small complement(2822913..2823938) Methylobacterium extorquens CM4 7117437 YP_002421454.1 CDS Mchl_2686 NC_011757.1 2823941 2824696 R PFAM: protein of unknown function YqcI/YcgG; KEGG: mex:Mext_2464 hypothetical protein; hypothetical protein complement(2823941..2824696) Methylobacterium extorquens CM4 7117438 YP_002421455.1 CDS Mchl_2687 NC_011757.1 2824973 2825569 R KEGG: mex:Mext_2465 hypothetical protein; hypothetical protein complement(2824973..2825569) Methylobacterium extorquens CM4 7117439 YP_002421456.1 CDS Mchl_2688 NC_011757.1 2825742 2827763 D TIGRFAM: oligopeptide transporters, OPT superfamily; oligopeptide transporter OPT family; PFAM: oligopeptide transporter OPT superfamily protein; KEGG: mex:Mext_2466 OPT family oligopeptide transporter; oligopeptide transporter OPT family 2825742..2827763 Methylobacterium extorquens CM4 7117440 YP_002421457.1 CDS Mchl_2689 NC_011757.1 2827832 2828626 D PFAM: ABC transporter; KEGG: mex:Mext_2467 ABC-2 type transporter; ABC transporter 2827832..2828626 Methylobacterium extorquens CM4 7117441 YP_002421458.1 CDS Mchl_2690 NC_011757.1 2829215 2829916 R KEGG: mex:Mext_2468 hypothetical protein; hypothetical protein complement(2829215..2829916) Methylobacterium extorquens CM4 7117443 YP_002421459.1 CDS Mchl_2691 NC_011757.1 2830152 2831345 D PFAM: ribonuclease BN; KEGG: mex:Mext_2469 ribonuclease BN; ribonuclease BN 2830152..2831345 Methylobacterium extorquens CM4 7117444 YP_002421460.1 CDS Mchl_2693 NC_011757.1 2831693 2832085 R KEGG: mex:Mext_2470 hypothetical protein; hypothetical protein complement(2831693..2832085) Methylobacterium extorquens CM4 7117446 YP_002421461.1 CDS Mchl_2694 NC_011757.1 2832590 2835733 D KEGG: mex:Mext_2471 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; DNA polymerase I 2832590..2835733 Methylobacterium extorquens CM4 7117447 YP_002421462.1 CDS Mchl_2695 NC_011757.1 2835917 2836579 R PFAM: endonuclease V; KEGG: mex:Mext_2472 deoxyribonuclease V; deoxyribonuclease V complement(2835917..2836579) Methylobacterium extorquens CM4 7117448 YP_002421463.1 CDS Mchl_2696 NC_011757.1 2836593 2837690 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(2836593..2837690) Methylobacterium extorquens CM4 7117449 YP_002421464.1 CDS Mchl_2697 NC_011757.1 2837770 2838402 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(2837770..2838402) Methylobacterium extorquens CM4 7117450 YP_002421465.1 CDS Mchl_2698 NC_011757.1 2838504 2839190 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc complement(2838504..2839190) Methylobacterium extorquens CM4 7117451 YP_002421466.1 CDS Mchl_2699 NC_011757.1 2839471 2839950 R KEGG: mex:Mext_2476 hypothetical protein; hypothetical protein complement(2839471..2839950) Methylobacterium extorquens CM4 7117452 YP_002421467.1 CDS Mchl_2700 NC_011757.1 2840302 2840487 D PFAM: Flp/Fap pilin component; KEGG: mpo:Mpop_2405 Flp/Fap pilin component; Flp/Fap pilin component 2840302..2840487 Methylobacterium extorquens CM4 7117453 YP_002421468.1 CDS Mchl_2701 NC_011757.1 2840756 2841253 D PFAM: peptidase A24A prepilin type IV; KEGG: mpo:Mpop_2406 peptidase A24A prepilin type IV; peptidase A24A prepilin type IV 2840756..2841253 Methylobacterium extorquens CM4 7117454 YP_002421469.1 CDS Mchl_2702 NC_011757.1 2841495 2842280 D TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: mex:Mext_2479 Flp pilus assembly protein CpaB; Flp pilus assembly protein CpaB 2841495..2842280 Methylobacterium extorquens CM4 7114609 YP_002421470.1 CDS Mchl_2703 NC_011757.1 2842292 2843791 D PFAM: type II and III secretion system protein; transport-associated; KEGG: mex:Mext_2480 type II and III secretion system protein; type II and III secretion system protein 2842292..2843791 Methylobacterium extorquens CM4 7114610 YP_002421471.1 CDS Mchl_2704 NC_011757.1 2843817 2844563 D pilus (Caulobacter type) biogenesis lipoprotein CpaD; TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; PFAM: pilus biogenesis CpaD family protein; KEGG: mex:Mext_2481 pilus biogenesis lipoprotein CpaD; pilus biogenesis lipoprotein CpaD 2843817..2844563 Methylobacterium extorquens CM4 7114611 YP_002421472.1 CDS Mchl_2705 NC_011757.1 2844647 2845891 D KEGG: mex:Mext_2482 pilus assembly protein CpaE; pilus assembly protein CpaE 2844647..2845891 Methylobacterium extorquens CM4 7114612 YP_002421473.1 CDS Mchl_2706 NC_011757.1 2845939 2847387 D PFAM: type II secretion system protein E; KEGG: mex:Mext_2483 type II secretion system protein E; type II secretion system protein E 2845939..2847387 Methylobacterium extorquens CM4 7114613 YP_002421474.1 CDS Mchl_2707 NC_011757.1 2847384 2848355 D PFAM: type II secretion system protein; KEGG: mex:Mext_2484 type II secretion system protein; type II secretion system protein 2847384..2848355 Methylobacterium extorquens CM4 7114197 YP_002421475.1 CDS Mchl_2708 NC_011757.1 2848428 2849399 D PFAM: type II secretion system protein; KEGG: mex:Mext_2485 type II secretion system protein; type II secretion system protein 2848428..2849399 Methylobacterium extorquens CM4 7113898 YP_002421476.1 CDS Mchl_2709 NC_011757.1 2849500 2850498 D PFAM: MaoC domain protein dehydratase; KEGG: mex:Mext_2486 dehydratase; MaoC domain-containing protein dehydratase 2849500..2850498 Methylobacterium extorquens CM4 7113899 YP_002421477.1 CDS Mchl_2710 NC_011757.1 2850495 2851757 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_2487 major facilitator transporter; major facilitator superfamily protein 2850495..2851757 Methylobacterium extorquens CM4 7113900 YP_002421478.1 CDS Mchl_2711 NC_011757.1 2851899 2852324 D PFAM: OsmC family protein; KEGG: mex:Mext_2488 OsmC family protein; OsmC family protein 2851899..2852324 Methylobacterium extorquens CM4 7113901 YP_002421479.1 CDS Mchl_2712 NC_011757.1 2852475 2853056 R PFAM: CoA-binding protein; KEGG: mex:Mext_2489 CoA-binding domain-containing protein; CoA-binding protein complement(2852475..2853056) Methylobacterium extorquens CM4 7113902 YP_002421480.1 CDS Mchl_2713 NC_011757.1 2853083 2853514 D PFAM: thioesterase superfamily protein; KEGG: mex:Mext_2490 thioesterase superfamily protein; thioesterase superfamily protein 2853083..2853514 Methylobacterium extorquens CM4 7113903 YP_002421481.1 CDS Mchl_2714 NC_011757.1 2853570 2854889 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_2491 major facilitator transporter; major facilitator superfamily protein complement(2853570..2854889) Methylobacterium extorquens CM4 7113904 YP_002421482.1 CDS Mchl_2715 NC_011757.1 2855259 2856785 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_2492 diguanylate cyclase; diguanylate cyclase 2855259..2856785 Methylobacterium extorquens CM4 7113905 YP_002421483.1 CDS Mchl_2716 NC_011757.1 2856858 2857277 R PFAM: BA14K family protein; KEGG: mex:Mext_2493 BA14K family protein; BA14K family protein complement(2856858..2857277) Methylobacterium extorquens CM4 7113906 YP_002421484.1 CDS Mchl_2717 NC_011757.1 2857428 2858339 R KEGG: mex:Mext_2494 hypothetical protein; hypothetical protein complement(2857428..2858339) Methylobacterium extorquens CM4 7113907 YP_002421485.1 CDS Mchl_2718 NC_011757.1 2858387 2858719 R PFAM: CsbD family protein; KEGG: mex:Mext_2495 CsbD family protein; CsbD family protein complement(2858387..2858719) Methylobacterium extorquens CM4 7113908 YP_002421486.1 CDS Mchl_2719 NC_011757.1 2859037 2859402 D KEGG: mex:Mext_2496 hypothetical protein; hypothetical protein 2859037..2859402 Methylobacterium extorquens CM4 7113909 YP_002421487.1 CDS Mchl_2720 NC_011757.1 2859512 2860141 D PFAM: 3'-5' exonuclease; KEGG: mex:Mext_2497 3'-5' exonuclease; 3'-5' exonuclease 2859512..2860141 Methylobacterium extorquens CM4 7113910 YP_002421488.1 CDS Mchl_2721 NC_011757.1 2860412 2861170 D PFAM: protein of unknown function DUF1239; KEGG: mex:Mext_2498 hypothetical protein; hypothetical protein 2860412..2861170 Methylobacterium extorquens CM4 7113911 YP_002421489.1 CDS Mchl_2722 NC_011757.1 2861167 2861907 D PFAM: OstA family protein; KEGG: mex:Mext_2499 OstA family protein; OstA family protein 2861167..2861907 Methylobacterium extorquens CM4 7113912 YP_002421490.1 CDS Mchl_2723 NC_011757.1 2861925 2862797 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_2500 ABC transporter; ABC transporter 2861925..2862797 Methylobacterium extorquens CM4 7113913 YP_002421491.1 CDS Mchl_2724 NC_011757.1 2863372 2864907 D TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: mex:Mext_2501 RNA polymerase sigma-54 factor, RpoN; RNA polymerase sigma-54 subunit RpoN 2863372..2864907 Methylobacterium extorquens CM4 7113914 YP_002421492.1 CDS Mchl_2725 NC_011757.1 2865021 2865629 D TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: mex:Mext_2502 ribosomal subunit interface protein; sigma 54 modulation protein/ribosomal protein S30EA 2865021..2865629 Methylobacterium extorquens CM4 7113915 YP_002421493.1 CDS Mchl_2726 NC_011757.1 2865828 2866295 D TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: mex:Mext_2503 PTS IIA-like nitrogen-regulatory protein PtsN; PTS IIA-like nitrogen-regulatory protein PtsN 2865828..2866295 Methylobacterium extorquens CM4 7113916 YP_002421494.1 CDS Mchl_2727 NC_011757.1 2866297 2866626 D KEGG: mex:Mext_2504 hypothetical protein; hypothetical protein 2866297..2866626 Methylobacterium extorquens CM4 7113917 YP_002421495.1 CDS Mchl_2728 NC_011757.1 2866762 2867775 D KEGG: mex:Mext_2505 magnesium chelatase ATPase I; TIGRFAM: magnesium chelatase ATPase I; PFAM: magnesium chelatase ChlI subunit; SMART: ATPase AAA; magnesium chelatase ATPase I 2866762..2867775 Methylobacterium extorquens CM4 7113918 YP_002421496.1 CDS Mchl_2729 NC_011757.1 2867798 2868436 R catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(2867798..2868436) Methylobacterium extorquens CM4 7113919 YP_002421497.1 CDS Mchl_2730 NC_011757.1 2868573 2869376 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(2868573..2869376) Methylobacterium extorquens CM4 7113920 YP_002421498.1 CDS Mchl_2731 NC_011757.1 2869451 2870146 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: mex:Mext_2508 multiple antibiotic resistance (MarC)-related protein; multiple antibiotic resistance (MarC)-like protein complement(2869451..2870146) Methylobacterium extorquens CM4 7113921 YP_002421499.1 CDS Mchl_2732 NC_011757.1 2870184 2870936 R PFAM: methyltransferase type 11; KEGG: mpo:Mpop_2437 methyltransferase type 11; type 11 methyltransferase complement(2870184..2870936) Methylobacterium extorquens CM4 7113922 YP_002421500.1 CDS Mchl_2733 NC_011757.1 2871150 2871929 D KEGG: mex:Mext_2510 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase 2871150..2871929 Methylobacterium extorquens CM4 7113923 YP_002421501.1 CDS Mchl_2734 NC_011757.1 2872115 2872342 D KEGG: mex:Mext_2511 hypothetical protein; hypothetical protein 2872115..2872342 Methylobacterium extorquens CM4 7113924 YP_002421502.1 CDS Mchl_2735 NC_011757.1 2872339 2873325 D TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase; KEGG: mex:Mext_2512 tyrosine recombinase XerD; tyrosine recombinase XerD 2872339..2873325 Methylobacterium extorquens CM4 7113925 YP_002421503.1 CDS Mchl_2736 NC_011757.1 2873496 2874713 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_2513 diguanylate cyclase; diguanylate cyclase 2873496..2874713 Methylobacterium extorquens CM4 7113926 YP_002421504.1 CDS Mchl_2737 NC_011757.1 2874847 2877078 D PFAM: glycoside hydrolase; KEGG: mex:Mext_2514 glycoside hydrolase family 3 protein; glycoside hydrolase 2874847..2877078 Methylobacterium extorquens CM4 7113927 YP_002421505.1 CDS Mchl_2738 NC_011757.1 2877085 2878287 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_2515 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(2877085..2878287) Methylobacterium extorquens CM4 7113928 YP_002421506.1 CDS Mchl_2739 NC_011757.1 2878325 2878849 R KEGG: mex:Mext_2516 hypothetical protein; hypothetical protein complement(2878325..2878849) Methylobacterium extorquens CM4 7113929 YP_002421507.1 CDS Mchl_2740 NC_011757.1 2878846 2880030 R PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: mex:Mext_2517 hypothetical protein; hypothetical protein complement(2878846..2880030) Methylobacterium extorquens CM4 7113930 YP_002421508.1 CDS Mchl_2741 NC_011757.1 2880468 2880641 D KEGG: mpo:Mpop_2446 hypothetical protein; hypothetical protein 2880468..2880641 Methylobacterium extorquens CM4 7113931 YP_002421509.1 CDS Mchl_2742 NC_011757.1 2880799 2882187 D TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_2519 RND family efflux transporter MFP subunit; efflux transporter RND family MFP subunit 2880799..2882187 Methylobacterium extorquens CM4 7113932 YP_002421510.1 CDS Mchl_2743 NC_011757.1 2882200 2885337 D PFAM: acriflavin resistance protein; KEGG: mex:Mext_2520 acriflavin resistance protein; acriflavin resistance protein 2882200..2885337 Methylobacterium extorquens CM4 7113933 YP_002421511.1 CDS Mchl_2744 NC_011757.1 2885334 2888648 D PFAM: acriflavin resistance protein; KEGG: mex:Mext_2521 acriflavin resistance protein; acriflavin resistance protein 2885334..2888648 Methylobacterium extorquens CM4 7113934 YP_002421512.1 CDS Mchl_2745 NC_011757.1 2888815 2890317 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mex:Mext_2522 RND efflux system outer membrane lipoprotein; NodT family RND efflux system outer membrane lipoprotein 2888815..2890317 Methylobacterium extorquens CM4 7113935 YP_002421513.1 CDS Mchl_2746 NC_011757.1 2890432 2891940 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2890432..2891940 Methylobacterium extorquens CM4 7113936 YP_002421514.1 CDS Mchl_2747 NC_011757.1 2892050 2893159 R KEGG: mpo:Mpop_2452 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase complement(2892050..2893159) Methylobacterium extorquens CM4 7113937 YP_002421515.1 CDS Mchl_2748 NC_011757.1 2893268 2893585 R KEGG: mex:Mext_2525 hypothetical protein; hypothetical protein complement(2893268..2893585) Methylobacterium extorquens CM4 7113938 YP_002421516.1 CDS Mchl_2749 NC_011757.1 2893832 2895367 D KEGG: mex:Mext_2526 hypothetical protein; hypothetical protein 2893832..2895367 Methylobacterium extorquens CM4 7113939 YP_002421517.1 CDS Mchl_2750 NC_011757.1 2895527 2897215 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: mex:Mext_2527 thiamine pyrophosphate binding domain-containing protein; thiamine pyrophosphate TPP binding domain-containing protein 2895527..2897215 Methylobacterium extorquens CM4 7113940 YP_002421518.1 CDS Mchl_2751 NC_011757.1 2897236 2897667 D PFAM: thiol-disulphide oxidoreductase DCC; KEGG: mex:Mext_2528 thiol-disulphide oxidoreductase DCC; thiol-disulfide oxidoreductase DCC 2897236..2897667 Methylobacterium extorquens CM4 7113941 YP_002421519.1 CDS Mchl_2752 NC_011757.1 2897835 2898797 R PFAM: polyprenyl synthetase; KEGG: mex:Mext_2529 polyprenyl synthetase; polyprenyl synthetase complement(2897835..2898797) Methylobacterium extorquens CM4 7113942 YP_002421520.1 CDS Mchl_2753 NC_011757.1 2898834 2899619 D TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: mex:Mext_2530 monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase 2898834..2899619 Methylobacterium extorquens CM4 7113943 YP_002421521.1 CDS Mchl_2754 NC_011757.1 2899624 2901027 R PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: mex:Mext_2531 deoxyribodipyrimidine photo-lyase; deoxyribodipyrimidine photo-lyase complement(2899624..2901027) Methylobacterium extorquens CM4 7113944 YP_002421522.1 CDS Mchl_2755 NC_011757.1 2901645 2902766 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: mex:Mext_2532 TRAP dicarboxylate transporter-DctP subunit; TRAP dicarboxylate transporter subunit DctP complement(2901645..2902766) Methylobacterium extorquens CM4 7113945 YP_002421523.1 CDS Mchl_2756 NC_011757.1 2902901 2903476 D KEGG: mex:Mext_2533 protein tyrosine phosphatase; protein tyrosine phosphatase 2902901..2903476 Methylobacterium extorquens CM4 7113946 YP_002421524.1 CDS Mchl_2757 NC_011757.1 2903486 2904610 R PFAM: extracellular ligand-binding receptor; KEGG: mex:Mext_2534 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(2903486..2904610) Methylobacterium extorquens CM4 7113947 YP_002421525.1 CDS Mchl_2758 NC_011757.1 2904929 2906101 R PFAM: polysaccharide export protein; KEGG: mex:Mext_2535 polysaccharide export protein; polysaccharide export protein complement(2904929..2906101) Methylobacterium extorquens CM4 7113948 YP_002421526.1 CDS Mchl_2759 NC_011757.1 2906299 2907768 R PFAM: sulfatase; KEGG: mex:Mext_2536 sulfatase; sulfatase complement(2906299..2907768) Methylobacterium extorquens CM4 7113949 YP_002421527.1 CDS Mchl_2760 NC_011757.1 2907775 2909724 R PFAM: capsule polysaccharide biosynthesis protein; KEGG: mex:Mext_2537 capsule polysaccharide biosynthesis protein; capsule polysaccharide biosynthesis protein complement(2907775..2909724) Methylobacterium extorquens CM4 7113950 YP_002421528.1 CDS Mchl_2761 NC_011757.1 2910087 2911394 D PFAM: capsule polysaccharide biosynthesis protein; KEGG: mex:Mext_2538 capsule polysaccharide biosynthesis protein; capsule polysaccharide biosynthesis protein 2910087..2911394 Methylobacterium extorquens CM4 7113951 YP_002421529.1 CDS Mchl_2762 NC_011757.1 2911451 2912218 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_2539 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2911451..2912218 Methylobacterium extorquens CM4 7113952 YP_002421530.1 CDS Mchl_2763 NC_011757.1 2912218 2913075 D PFAM: formyl transferase; KEGG: mex:Mext_2540 formyl transferase domain-containing protein; formyl transferase 2912218..2913075 Methylobacterium extorquens CM4 7113953 YP_002421531.1 CDS Mchl_2764 NC_011757.1 2913079 2914359 R catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase complement(2913079..2914359) Methylobacterium extorquens CM4 7113954 YP_002421532.1 CDS Mchl_2765 NC_011757.1 2914764 2915312 D TIGRFAM: ubiquinol-cytochrome C reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; Ubiquinol-cytochrome C reductase iron-sulfur subunit; KEGG: mex:Mext_2542 ubiquinol-cytochrome C reductase, iron-sulfur subunit; ubiquinol-cytochrome C reductase, iron-sulfur subunit 2914764..2915312 Methylobacterium extorquens CM4 7113955 YP_002421533.1 CDS Mchl_2766 NC_011757.1 2915347 2916639 D PFAM: cytochrome b/b6 domain; KEGG: mex:Mext_2543 cytochrome b/b6 domain-containing protein; cytochrome b/b6 domain 2915347..2916639 Methylobacterium extorquens CM4 7113956 YP_002421534.1 CDS Mchl_2767 NC_011757.1 2916661 2917554 D PFAM: cytochrome C1; KEGG: mex:Mext_2544 cytochrome C1; cytochrome C1 2916661..2917554 Methylobacterium extorquens CM4 7113957 YP_002421535.1 CDS Mchl_2768 NC_011757.1 2917766 2918641 D Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate; 5'-methylthioadenosine phosphorylase 2917766..2918641 Methylobacterium extorquens CM4 7113958 YP_002421536.1 CDS Mchl_2769 NC_011757.1 2918746 2919009 R KEGG: mex:Mext_2546 hypothetical protein; hypothetical protein complement(2918746..2919009) Methylobacterium extorquens CM4 7113959 YP_002421537.1 CDS Mchl_2770 NC_011757.1 2919044 2919949 R PFAM: metallophosphoesterase; KEGG: mex:Mext_2547 metallophosphoesterase; metallophosphoesterase complement(2919044..2919949) Methylobacterium extorquens CM4 7113960 YP_002421538.1 CDS hisB NC_011757.1 2920160 2920747 D catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 2920160..2920747 Methylobacterium extorquens CM4 7113961 YP_002421539.1 CDS Mchl_2772 NC_011757.1 2920770 2921273 D KEGG: mex:Mext_2549 hypothetical protein; hypothetical protein 2920770..2921273 Methylobacterium extorquens CM4 7113962 YP_002421540.1 CDS hisH NC_011757.1 2921270 2921932 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 2921270..2921932 Methylobacterium extorquens CM4 7113963 YP_002421541.1 CDS Mchl_2774 NC_011757.1 2921974 2922741 D TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: mex:Mext_2551 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 2921974..2922741 Methylobacterium extorquens CM4 7113964 YP_002421542.1 CDS Mchl_2775 NC_011757.1 2922789 2923565 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 2922789..2923565 Methylobacterium extorquens CM4 7113965 YP_002421543.1 CDS Mchl_2776 NC_011757.1 2923659 2924009 D TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: MazG nucleotide pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: mex:Mext_2553 phosphoribosyl-ATP diphosphatase; phosphoribosyl-ATP diphosphatase 2923659..2924009 Methylobacterium extorquens CM4 7113966 YP_002421544.1 CDS Mchl_2777 NC_011757.1 2924006 2925019 D catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 2924006..2925019 Methylobacterium extorquens CM4 7113967 YP_002421545.1 CDS Mchl_2778 NC_011757.1 2925186 2926862 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_2555 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2925186..2926862) Methylobacterium extorquens CM4 7113968 YP_002421546.1 CDS Mchl_2779 NC_011757.1 2927429 2928574 D KEGG: mex:Mext_2556 hypothetical protein; hypothetical protein 2927429..2928574 Methylobacterium extorquens CM4 7113969 YP_002421547.1 CDS Mchl_2780 NC_011757.1 2928766 2929287 D PFAM: response regulator receiver; KEGG: mex:Mext_2557 response regulator receiver; response regulator receiver protein 2928766..2929287 Methylobacterium extorquens CM4 7113970 YP_002421548.1 CDS Mchl_2781 NC_011757.1 2930057 2930728 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2558 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 2930057..2930728 Methylobacterium extorquens CM4 7113971 YP_002421549.1 CDS Mchl_2782 NC_011757.1 2930849 2931175 R KEGG: mex:Mext_2559 hypothetical protein; hypothetical protein complement(2930849..2931175) Methylobacterium extorquens CM4 7113972 YP_002421550.1 CDS Mchl_2783 NC_011757.1 2931383 2931859 R TIGRFAM: phasin; PFAM: Phasin 2 family protein; KEGG: mex:Mext_2560 phasin; phasin complement(2931383..2931859) Methylobacterium extorquens CM4 7113973 YP_002421551.1 CDS Mchl_2784 NC_011757.1 2932101 2934626 D KEGG: mex:Mext_2561 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 2932101..2934626 Methylobacterium extorquens CM4 7113974 YP_002421552.1 CDS Mchl_2785 NC_011757.1 2934886 2936844 D Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 2934886..2936844 Methylobacterium extorquens CM4 7113975 YP_002421553.1 CDS Mchl_2786 NC_011757.1 2937019 2937405 D PFAM: protein of unknown function DUF485; KEGG: mex:Mext_2563 hypothetical protein; hypothetical protein 2937019..2937405 Methylobacterium extorquens CM4 7113976 YP_002421554.1 CDS Mchl_2787 NC_011757.1 2937402 2939087 D TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: mex:Mext_2564 SSS family solute/sodium (Na+) symporter; SSS sodium solute transporter superfamily protein 2937402..2939087 Methylobacterium extorquens CM4 7113977 YP_002421555.1 CDS Mchl_2788 NC_011757.1 2939346 2941082 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_2565 major facilitator transporter; major facilitator superfamily protein 2939346..2941082 Methylobacterium extorquens CM4 7113978 YP_002421556.1 CDS Mchl_2789 NC_011757.1 2941296 2942894 R KEGG: mex:Mext_2566 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(2941296..2942894) Methylobacterium extorquens CM4 7114856 YP_002421557.1 CDS Mchl_2790 NC_011757.1 2943103 2944815 R PFAM: Heparinase II/III; KEGG: mex:Mext_2567 heparinase II/III family protein; Heparinase II/III complement(2943103..2944815) Methylobacterium extorquens CM4 7115019 YP_002421558.1 CDS Mchl_2791 NC_011757.1 2945003 2945851 R PFAM: rhodanese; KEGG: mex:Mext_2568 rhodanese; rhodanese complement(2945003..2945851) Methylobacterium extorquens CM4 7115020 YP_002421559.1 CDS Mchl_2792 NC_011757.1 2946124 2946360 D KEGG: mex:Mext_2569 hypothetical protein; hypothetical protein 2946124..2946360 Methylobacterium extorquens CM4 7115021 YP_002421560.1 CDS Mchl_2793 NC_011757.1 2946471 2947556 R PFAM: Hemolysin-type calcium-binding region; KEGG: mex:Mext_2570 hemolysin-type calcium-binding region; hemolysin-type calcium-binding region complement(2946471..2947556) Methylobacterium extorquens CM4 7115022 YP_002421561.1 CDS Mchl_2794 NC_011757.1 2948216 2949748 D PFAM: helicase; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_2571 DEAD/DEAH box helicase domain-containing protein; DEAD/DEAH box helicase 2948216..2949748 Methylobacterium extorquens CM4 7115023 YP_002421562.1 CDS Mchl_2795 NC_011757.1 2949923 2950108 D PFAM: protein of unknown function DUF1508; KEGG: mpo:Mpop_2504 protein of unknown function DUF1508; hypothetical protein 2949923..2950108 Methylobacterium extorquens CM4 7115024 YP_002421563.1 CDS Mchl_2796 NC_011757.1 2950235 2950519 D KEGG: mex:Mext_2573 hypothetical protein; hypothetical protein 2950235..2950519 Methylobacterium extorquens CM4 7115025 YP_002421564.1 CDS Mchl_2797 NC_011757.1 2950729 2950872 D KEGG: mpo:Mpop_2506 hypothetical protein; hypothetical protein 2950729..2950872 Methylobacterium extorquens CM4 7115026 YP_002421565.1 CDS Mchl_2798 NC_011757.1 2950958 2951377 D PFAM: thioesterase superfamily protein; KEGG: mex:Mext_2575 thioesterase superfamily protein; thioesterase superfamily protein 2950958..2951377 Methylobacterium extorquens CM4 7115027 YP_002421566.1 CDS Mchl_2799 NC_011757.1 2951542 2952186 D PFAM: beta-lactamase; KEGG: mex:Mext_2576 beta-lactamase domain-containing protein; beta-lactamase 2951542..2952186 Methylobacterium extorquens CM4 7115028 YP_002421567.1 CDS Mchl_2800 NC_011757.1 2952425 2954872 D KEGG: mex:Mext_2577 DNA gyrase subunit beta; TIGRFAM: DNA gyrase subunit beta; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; DNA topoisomerase type IIsubunit alpha B region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit beta 2952425..2954872 Methylobacterium extorquens CM4 7115029 YP_002421568.1 CDS Mchl_2801 NC_011757.1 2954936 2955643 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_2578 sigma-70 family RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit complement(2954936..2955643) Methylobacterium extorquens CM4 7115030 YP_002421569.1 CDS Mchl_2802 NC_011757.1 2956083 2956508 D TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: mex:Mext_2579 large conductance mechanosensitive channel protein; large conductance mechanosensitive channel protein 2956083..2956508 Methylobacterium extorquens CM4 7115031 YP_002421570.1 CDS Mchl_2803 NC_011757.1 2956515 2956805 R KEGG: mex:Mext_2580 hypothetical protein; hypothetical protein complement(2956515..2956805) Methylobacterium extorquens CM4 7115032 YP_002421571.1 CDS Mchl_2804 NC_011757.1 2957097 2957510 R PFAM: protein of unknown function DUF1236; KEGG: mex:Mext_2581 hypothetical protein; hypothetical protein complement(2957097..2957510) Methylobacterium extorquens CM4 7115033 YP_002421572.1 CDS Mchl_2805 NC_011757.1 2957693 2958874 R PFAM: aminotransferase class I and II; KEGG: mex:Mext_2582 aminotransferase class I and II; class I and II aminotransferase complement(2957693..2958874) Methylobacterium extorquens CM4 7115034 YP_002421573.1 CDS Mchl_2806 NC_011757.1 2958996 2959187 R KEGG: mex:Mext_2583 hypothetical protein; hypothetical protein complement(2958996..2959187) Methylobacterium extorquens CM4 7115035 YP_002421574.1 CDS Mchl_2807 NC_011757.1 2959355 2960761 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_2584 ATPase domain-containing protein; histidine kinase complement(2959355..2960761) Methylobacterium extorquens CM4 7115036 YP_002421575.1 CDS Mchl_2808 NC_011757.1 2960769 2961497 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_2585 response regulator receiver; transcriptional regulator complement(2960769..2961497) Methylobacterium extorquens CM4 7115037 YP_002421576.1 CDS Mchl_2809 NC_011757.1 2961497 2962072 R PFAM: regulatory protein MarR; KEGG: mex:Mext_2586 regulatory protein MarR; MarR family transcriptional regulator complement(2961497..2962072) Methylobacterium extorquens CM4 7115038 YP_002421577.1 CDS Mchl_2810 NC_011757.1 2962281 2963168 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 2962281..2963168 Methylobacterium extorquens CM4 7115039 YP_002421578.1 CDS Mchl_2811 NC_011757.1 2963271 2963534 D KEGG: mex:Mext_2588 hypothetical protein; hypothetical protein 2963271..2963534 Methylobacterium extorquens CM4 7115040 YP_002421579.1 CDS Mchl_2812 NC_011757.1 2963856 2964026 D PFAM: Flp/Fap pilin component; KEGG: mpo:Mpop_2617 Flp/Fap pilin component; Flp/Fap pilin component 2963856..2964026 Methylobacterium extorquens CM4 7115041 YP_002421580.1 CDS Mchl_2813 NC_011757.1 2964174 2964944 R KEGG: mex:Mext_2590 hypothetical protein; hypothetical protein complement(2964174..2964944) Methylobacterium extorquens CM4 7115042 YP_002421581.1 CDS Mchl_2814 NC_011757.1 2965182 2966663 R PFAM: multi antimicrobial extrusion protein MatE; KEGG: mex:Mext_2591 multi anti extrusion protein MatE; multi antimicrobial extrusion protein MatE complement(2965182..2966663) Methylobacterium extorquens CM4 7115043 YP_002421582.1 CDS Mchl_2815 NC_011757.1 2966656 2968554 R TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mex:Mext_2592 potassium efflux system protein; potassium efflux system protein complement(2966656..2968554) Methylobacterium extorquens CM4 7115044 YP_002421583.1 CDS ispH NC_011757.1 2968907 2969929 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2968907..2969929 Methylobacterium extorquens CM4 7115045 YP_002421584.1 CDS Mchl_2817 NC_011757.1 2970004 2970993 D KEGG: mex:Mext_2594 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: aminoglycoside phosphotransferase; homoserine kinase 2970004..2970993 Methylobacterium extorquens CM4 7115046 YP_002421585.1 CDS Mchl_2818 NC_011757.1 2971042 2971524 R PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: mex:Mext_2595 redoxin domain-containing protein; redoxin complement(2971042..2971524) Methylobacterium extorquens CM4 7115047 YP_002421586.1 CDS Mchl_2819 NC_011757.1 2971648 2972256 D PFAM: protein of unknown function DUF179; KEGG: mex:Mext_2596 hypothetical protein; hypothetical protein 2971648..2972256 Methylobacterium extorquens CM4 7115048 YP_002421587.1 CDS Mchl_2820 NC_011757.1 2972295 2973371 R KEGG: mex:Mext_2597 hypothetical protein; hypothetical protein complement(2972295..2973371) Methylobacterium extorquens CM4 7115049 YP_002421588.1 CDS alaS NC_011757.1 2973540 2976215 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(2973540..2976215) Methylobacterium extorquens CM4 7115050 YP_002421589.1 CDS Mchl_2822 NC_011757.1 2976310 2977017 R PFAM: hypothetical protein; KEGG: mex:Mext_2599 helix-turn-helix type 11 domain-containing protein; hypothetical protein complement(2976310..2977017) Methylobacterium extorquens CM4 7115051 YP_002421590.1 CDS Mchl_2823 NC_011757.1 2977092 2977694 D KEGG: mex:Mext_2600 glutathione S-transferase; glutathione S-transferase 2977092..2977694 Methylobacterium extorquens CM4 7115052 YP_002421591.1 CDS Mchl_2824 NC_011757.1 2977777 2978877 R KEGG: mex:Mext_2601 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: ATPase AAA; recA protein complement(2977777..2978877) Methylobacterium extorquens CM4 7115053 YP_002421592.1 CDS Mchl_2825 NC_011757.1 2979133 2981844 R KEGG: mex:Mext_2602 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase complement(2979133..2981844) Methylobacterium extorquens CM4 7115054 YP_002421593.1 CDS Mchl_2826 NC_011757.1 2982003 2983067 R TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: mex:Mext_2603 flagellar biosynthetic protein FlhB; flagellar biosynthetic protein FlhB complement(2982003..2983067) Methylobacterium extorquens CM4 7115055 YP_002421594.1 CDS Mchl_2827 NC_011757.1 2983170 2983946 R TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: mex:Mext_2604 flagellar biosynthetic protein FliR; flagellar biosynthetic protein FliR complement(2983170..2983946) Methylobacterium extorquens CM4 7115056 YP_002421595.1 CDS Mchl_2828 NC_011757.1 2983992 2984258 R TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: mex:Mext_2605 flagellar biosynthetic protein FliQ; flagellar biosynthetic protein FliQ complement(2983992..2984258) Methylobacterium extorquens CM4 7115057 YP_002421596.1 CDS Mchl_2829 NC_011757.1 2984340 2984663 R TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: mex:Mext_2606 flagellar hook-basal body complex subunit FliE; flagellar hook-basal body complex subunit FliE complement(2984340..2984663) Methylobacterium extorquens CM4 7115058 YP_002421597.1 CDS flgC NC_011757.1 2984669 2985079 R with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC complement(2984669..2985079) Methylobacterium extorquens CM4 7115059 YP_002421598.1 CDS flgB NC_011757.1 2985114 2985530 R with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar basal body rod protein FlgB complement(2985114..2985530) Methylobacterium extorquens CM4 7115060 YP_002421599.1 CDS Mchl_2832 NC_011757.1 2985769 2987076 D KEGG: mex:Mext_2609 hypothetical protein; hypothetical protein 2985769..2987076 Methylobacterium extorquens CM4 7115061 YP_002421600.1 CDS Mchl_2833 NC_011757.1 2987184 2988278 D PFAM: FAD dependent oxidoreductase; KEGG: mex:Mext_2610 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2987184..2988278 Methylobacterium extorquens CM4 7115062 YP_002421601.1 CDS Mchl_2834 NC_011757.1 2988281 2989120 R PFAM: transglutaminase; KEGG: mex:Mext_2611 transglutaminase domain-containing protein; transglutaminase complement(2988281..2989120) Methylobacterium extorquens CM4 7115063 YP_002421602.1 CDS Mchl_2835 NC_011757.1 2989318 2990124 D TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome C assembly protein; KEGG: mex:Mext_2612 heme exporter protein CcmC; heme exporter protein CcmC 2989318..2990124 Methylobacterium extorquens CM4 7115064 YP_002421603.1 CDS Mchl_2836 NC_011757.1 2990262 2990414 D TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD); KEGG: mex:Mext_2613 heme exporter protein CcmD; heme exporter protein CcmD 2990262..2990414 Methylobacterium extorquens CM4 7115065 YP_002421604.1 CDS Mchl_2837 NC_011757.1 2990411 2991031 D TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; thioredoxin domain; KEGG: mex:Mext_2614 periplasmic protein thiol--disulphide oxidoreductase DsbE; periplasmic protein thiol/disulfide oxidoreductase DsbE 2990411..2991031 Methylobacterium extorquens CM4 7115066 YP_002421605.1 CDS Mchl_2838 NC_011757.1 2991154 2991897 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mex:Mext_2615 hypothetical protein; hypothetical protein 2991154..2991897 Methylobacterium extorquens CM4 7115067 YP_002421606.1 CDS Mchl_2839 NC_011757.1 2991894 2993468 D PFAM: protein of unknown function DUF162; KEGG: mex:Mext_2616 hypothetical protein; hypothetical protein 2991894..2993468 Methylobacterium extorquens CM4 7115068 YP_002421607.1 CDS Mchl_2840 NC_011757.1 2993465 2994070 D PFAM: protein of unknown function DUF162; KEGG: mex:Mext_2617 hypothetical protein; hypothetical protein 2993465..2994070 Methylobacterium extorquens CM4 7115069 YP_002421608.1 CDS Mchl_2841 NC_011757.1 2994157 2995017 D PFAM: transglutaminase; KEGG: mex:Mext_2618 transglutaminase domain-containing protein; transglutaminase 2994157..2995017 Methylobacterium extorquens CM4 7115070 YP_002421609.1 CDS rplM NC_011757.1 2995432 2995893 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 2995432..2995893 Methylobacterium extorquens CM4 7115071 YP_002421610.1 CDS rpsI NC_011757.1 2995896 2996381 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 2995896..2996381 Methylobacterium extorquens CM4 7115072 YP_002421611.1 CDS Mchl_2844 NC_011757.1 2996464 2996838 D KEGG: mex:Mext_2621 hypothetical protein; hypothetical protein 2996464..2996838 Methylobacterium extorquens CM4 7115073 YP_002421612.1 CDS Mchl_2845 NC_011757.1 2996920 2997129 D PFAM: TOBE domain protein; KEGG: mex:Mext_2622 TOBE domain-containing protein; TOBE domain-containing protein 2996920..2997129 Methylobacterium extorquens CM4 7115074 YP_002421613.1 CDS Mchl_2846 NC_011757.1 2997142 2998020 R PFAM: aldose 1-epimerase; KEGG: mex:Mext_2623 aldose 1-epimerase; aldose 1-epimerase complement(2997142..2998020) Methylobacterium extorquens CM4 7115075 YP_002421614.1 CDS Mchl_2847 NC_011757.1 2998083 2999843 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_2624 ABC transporter; ABC transporter complement(2998083..2999843) Methylobacterium extorquens CM4 7115076 YP_002421615.1 CDS Mchl_2848 NC_011757.1 3000253 3000726 D KEGG: mex:Mext_2625 hypothetical protein; hypothetical protein 3000253..3000726 Methylobacterium extorquens CM4 7115077 YP_002421616.1 CDS Mchl_2849 NC_011757.1 3000856 3000954 D KEGG: mpo:Mpop_2656 hypothetical protein; hypothetical protein 3000856..3000954 Methylobacterium extorquens CM4 7115078 YP_002421617.1 CDS Mchl_2850 NC_011757.1 3001577 3001999 D KEGG: mex:Mext_2626 hypothetical protein; hypothetical protein 3001577..3001999 Methylobacterium extorquens CM4 7115079 YP_002421618.1 CDS Mchl_2851 NC_011757.1 3002576 3002794 R PFAM: protein of unknown function DUF329; KEGG: mex:Mext_2627 hypothetical protein; hypothetical protein complement(3002576..3002794) Methylobacterium extorquens CM4 7115081 YP_002421619.1 CDS Mchl_2852 NC_011757.1 3002791 3003462 R TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: mex:Mext_2628 maf protein; maf protein complement(3002791..3003462) Methylobacterium extorquens CM4 7115082 YP_002421620.1 CDS Mchl_2853 NC_011757.1 3003762 3004070 R KEGG: mex:Mext_2629 hypothetical protein; hypothetical protein complement(3003762..3004070) Methylobacterium extorquens CM4 7115084 YP_002421621.1 CDS Mchl_2854 NC_011757.1 3004270 3004560 R KEGG: mex:Mext_2630 hypothetical protein; hypothetical protein complement(3004270..3004560) Methylobacterium extorquens CM4 7115085 YP_002421622.1 CDS Mchl_2855 NC_011757.1 3004725 3006968 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2631 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(3004725..3006968) Methylobacterium extorquens CM4 7115086 YP_002421623.1 CDS Mchl_2856 NC_011757.1 3007654 3007785 D KEGG: mpo:Mpop_2755 hypothetical protein; hypothetical protein 3007654..3007785 Methylobacterium extorquens CM4 7115087 YP_002421624.1 CDS Mchl_2857 NC_011757.1 3007879 3008298 D KEGG: mex:Mext_2632 hypothetical protein; hypothetical protein 3007879..3008298 Methylobacterium extorquens CM4 7115088 YP_002421625.1 CDS Mchl_2858 NC_011757.1 3008429 3008692 D KEGG: mex:Mext_2633 hypothetical protein; hypothetical protein 3008429..3008692 Methylobacterium extorquens CM4 7115089 YP_002421626.1 CDS Mchl_2859 NC_011757.1 3008736 3009401 R TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: mex:Mext_2634 heme exporter protein CcmB; heme exporter protein CcmB complement(3008736..3009401) Methylobacterium extorquens CM4 7115090 YP_002421627.1 CDS Mchl_2860 NC_011757.1 3009401 3010048 R KEGG: mex:Mext_2635 heme exporter protein CcmA; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter; SMART: ATPase AAA; heme exporter protein CcmA complement(3009401..3010048) Methylobacterium extorquens CM4 7115091 YP_002421628.1 CDS Mchl_2861 NC_011757.1 3010266 3010463 D KEGG: mex:Mext_2636 hypothetical protein; hypothetical protein 3010266..3010463 Methylobacterium extorquens CM4 7115092 YP_002421629.1 CDS Mchl_2862 NC_011757.1 3010770 3013469 D TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: mex:Mext_2637 aconitate hydratase 1; aconitate hydratase 1 3010770..3013469 Methylobacterium extorquens CM4 7115093 YP_002421630.1 CDS Mchl_2863 NC_011757.1 3013522 3013956 D hypothetical protein 3013522..3013956 Methylobacterium extorquens CM4 7115094 YP_002421631.1 CDS Mchl_2864 NC_011757.1 3014065 3014364 D PFAM: antibiotic biosynthesis monooxygenase; KEGG: mex:Mext_2638 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 3014065..3014364 Methylobacterium extorquens CM4 7115095 YP_002421632.1 CDS Mchl_2865 NC_011757.1 3014493 3015134 D TIGRFAM: maleylacetoacetate isomerase; PFAM: glutathione S-transferase domain; KEGG: mex:Mext_2639 maleylacetoacetate isomerase; maleylacetoacetate isomerase 3014493..3015134 Methylobacterium extorquens CM4 7115096 YP_002421633.1 CDS Mchl_2866 NC_011757.1 3015291 3016622 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_2640 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3015291..3016622 Methylobacterium extorquens CM4 7115097 YP_002421634.1 CDS Mchl_2867 NC_011757.1 3016708 3017034 D PFAM: ethyl tert-butyl ether degradation EthD; KEGG: mex:Mext_2641 ethyl tert-butyl ether degradation EthD; ethyl tert-butyl ether degradation EthD 3016708..3017034 Methylobacterium extorquens CM4 7115098 YP_002421635.1 CDS Mchl_2868 NC_011757.1 3017034 3017345 D KEGG: mex:Mext_2642 hypothetical protein; hypothetical protein 3017034..3017345 Methylobacterium extorquens CM4 7115099 YP_002421636.1 CDS Mchl_2869 NC_011757.1 3017426 3018799 R PFAM: chemotaxis sensory transducer; KEGG: mex:Mext_2643 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3017426..3018799) Methylobacterium extorquens CM4 7115674 YP_002421637.1 CDS Mchl_2870 NC_011757.1 3019178 3020251 D KEGG: mex:Mext_2644 quinolinate synthetase complex, A subunit; TIGRFAM: quinolinate synthetase complex, subunit alpha; PFAM: Quinolinate synthetase A; quinolinate synthetase complex subunit alpha 3019178..3020251 Methylobacterium extorquens CM4 7115677 YP_002421638.1 CDS Mchl_2871 NC_011757.1 3020251 3021780 D PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: mex:Mext_2645 L-aspartate oxidase; L-aspartate oxidase 3020251..3021780 Methylobacterium extorquens CM4 7115678 YP_002421639.1 CDS Mchl_2872 NC_011757.1 3021773 3022633 D KEGG: mex:Mext_2646 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 3021773..3022633 Methylobacterium extorquens CM4 7115679 YP_002421640.1 CDS Mchl_2873 NC_011757.1 3022949 3023617 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2647 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 3022949..3023617 Methylobacterium extorquens CM4 7115680 YP_002421641.1 CDS Mchl_2874 NC_011757.1 3023717 3023854 R KEGG: mpo:Mpop_2771 hypothetical protein; hypothetical protein complement(3023717..3023854) Methylobacterium extorquens CM4 7115681 YP_002421642.1 CDS Mchl_2875 NC_011757.1 3024008 3024250 D KEGG: mex:Mext_2648 hypothetical protein; hypothetical protein 3024008..3024250 Methylobacterium extorquens CM4 7115682 YP_002421643.1 CDS Mchl_2876 NC_011757.1 3024590 3025018 R PFAM: protein of unknown function DUF971; KEGG: mex:Mext_2649 hypothetical protein; hypothetical protein complement(3024590..3025018) Methylobacterium extorquens CM4 7115683 YP_002421644.1 CDS Mchl_2877 NC_011757.1 3025162 3026196 D KEGG: mex:Mext_2650 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: radical SAM domain protein; molybdenum cofactor synthesis protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 3025162..3026196 Methylobacterium extorquens CM4 7115684 YP_002421645.1 CDS Mchl_2878 NC_011757.1 3026203 3027123 R KEGG: mex:Mext_2651 hypothetical protein; hypothetical protein complement(3026203..3027123) Methylobacterium extorquens CM4 7115685 YP_002421646.1 CDS Mchl_2879 NC_011757.1 3027024 3028220 R PFAM: GSCFA domain protein; KEGG: mex:Mext_2652 GSCFA domain-containing protein; GSCFA domain-containing protein complement(3027024..3028220) Methylobacterium extorquens CM4 7115686 YP_002421647.1 CDS Mchl_2880 NC_011757.1 3028415 3029281 D PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mex:Mext_2653 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase 3028415..3029281 Methylobacterium extorquens CM4 7115687 YP_002421648.1 CDS miaA NC_011757.1 3029259 3030212 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(3029259..3030212) Methylobacterium extorquens CM4 7115688 YP_002421649.1 CDS Mchl_2882 NC_011757.1 3030224 3031120 D KEGG: mex:Mext_2655 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB 3030224..3031120 Methylobacterium extorquens CM4 7115689 YP_002421650.1 CDS Mchl_2883 NC_011757.1 3031229 3032764 R KEGG: mex:Mext_2656 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do complement(3031229..3032764) Methylobacterium extorquens CM4 7115690 YP_002421651.1 CDS Mchl_2884 NC_011757.1 3032876 3033817 R TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: mex:Mext_2657 HflC protein; HflC protein complement(3032876..3033817) Methylobacterium extorquens CM4 7115691 YP_002421652.1 CDS Mchl_2885 NC_011757.1 3033814 3034962 R TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: mex:Mext_2658 HflK protein; HflK protein complement(3033814..3034962) Methylobacterium extorquens CM4 7115692 YP_002421653.1 CDS Mchl_2886 NC_011757.1 3035255 3035755 R PFAM: dihydrofolate reductase region; KEGG: mex:Mext_2659 dihydrofolate reductase; dihydrofolate reductase complement(3035255..3035755) Methylobacterium extorquens CM4 7115693 YP_002421654.1 CDS Mchl_2887 NC_011757.1 3035755 3036549 R PFAM: thymidylate synthase; KEGG: mex:Mext_2660 thymidylate synthase; Thymidylate synthase complement(3035755..3036549) Methylobacterium extorquens CM4 7115694 YP_002421655.1 CDS Mchl_2888 NC_011757.1 3036637 3037455 R PFAM: hypothetical protein; KEGG: mex:Mext_2661 abortive infection protein; hypothetical protein complement(3036637..3037455) Methylobacterium extorquens CM4 7115695 YP_002421656.1 CDS Mchl_2889 NC_011757.1 3037933 3038586 D PFAM: protein of unknown function DUF1321; KEGG: mex:Mext_2662 hypothetical protein; hypothetical protein 3037933..3038586 Methylobacterium extorquens CM4 7115696 YP_002421657.1 CDS Mchl_2890 NC_011757.1 3038637 3040037 R PFAM: cytochrome P450; KEGG: mex:Mext_2663 cytochrome P450; cytochrome P450 complement(3038637..3040037) Methylobacterium extorquens CM4 7115697 YP_002421658.1 CDS Mchl_2891 NC_011757.1 3040163 3041581 D TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; fumarate hydratase class II; KEGG: mex:Mext_2664 fumarate hydratase, class II; fumarate hydratase, class II 3040163..3041581 Methylobacterium extorquens CM4 7115698 YP_002421659.1 CDS Mchl_2892 NC_011757.1 3041642 3041830 D KEGG: mex:Mext_2665 hypothetical protein; hypothetical protein 3041642..3041830 Methylobacterium extorquens CM4 7115699 YP_002421660.1 CDS Mchl_2893 NC_011757.1 3041827 3042138 D KEGG: mpo:Mpop_2788 hypothetical protein; hypothetical protein 3041827..3042138 Methylobacterium extorquens CM4 7115700 YP_002421661.1 CDS Mchl_2894 NC_011757.1 3042061 3042546 R PFAM: protein of unknown function DUF1052; KEGG: mex:Mext_2667 hypothetical protein; hypothetical protein complement(3042061..3042546) Methylobacterium extorquens CM4 7115701 YP_002421662.1 CDS Mchl_2895 NC_011757.1 3042616 3043410 R PFAM: periplasmic binding protein; KEGG: mex:Mext_2668 periplasmic binding protein; periplasmic binding protein complement(3042616..3043410) Methylobacterium extorquens CM4 7115702 YP_002421663.1 CDS Mchl_2896 NC_011757.1 3043417 3043938 R KEGG: mex:Mext_2669 hypothetical protein; hypothetical protein complement(3043417..3043938) Methylobacterium extorquens CM4 7115703 YP_002421664.1 CDS Mchl_2897 NC_011757.1 3044157 3045008 D catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase 3044157..3045008 Methylobacterium extorquens CM4 7115704 YP_002421665.1 CDS Mchl_2898 NC_011757.1 3045028 3045957 D TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: mex:Mext_2671 PhzF family phenazine biosynthesis protein; phenazine biosynthesis protein PhzF family 3045028..3045957 Methylobacterium extorquens CM4 7115705 YP_002421666.1 CDS Mchl_2899 NC_011757.1 3045947 3046678 D PFAM: NUDIX hydrolase; KEGG: mex:Mext_2672 NUDIX hydrolase; NUDIX hydrolase 3045947..3046678 Methylobacterium extorquens CM4 7115706 YP_002421667.1 CDS Mchl_2900 NC_011757.1 3046697 3047023 R KEGG: mex:Mext_2673 hypothetical protein; hypothetical protein complement(3046697..3047023) Methylobacterium extorquens CM4 7115707 YP_002421668.1 CDS Mchl_2901 NC_011757.1 3047447 3049009 D catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 3047447..3049009 Methylobacterium extorquens CM4 7115708 YP_002421669.1 CDS Mchl_2902 NC_011757.1 3049201 3051036 D KEGG: mex:Mext_2675 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 3049201..3051036 Methylobacterium extorquens CM4 7115709 YP_002421670.1 CDS Mchl_2903 NC_011757.1 3051199 3052209 D PFAM: protein of unknown function DUF1611; KEGG: mex:Mext_2676 hypothetical protein; hypothetical protein 3051199..3052209 Methylobacterium extorquens CM4 7115710 YP_002421671.1 CDS Mchl_2904 NC_011757.1 3052223 3053203 D PFAM: mandelate racemase/muconate lactonizing protein; KEGG: mex:Mext_2677 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein 3052223..3053203 Methylobacterium extorquens CM4 7115711 YP_002421672.1 CDS Mchl_2905 NC_011757.1 3053213 3054331 R PFAM: lytic transglycosylase catalytic; KEGG: mex:Mext_2678 lytic transglycosylase catalytic; lytic transglycosylase complement(3053213..3054331) Methylobacterium extorquens CM4 7115712 YP_002421673.1 CDS Mchl_2906 NC_011757.1 3054647 3055840 D PFAM: myo-inositol-1-phosphate synthase; myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: mex:Mext_2679 inositol-3-phosphate synthase; inositol-3-phosphate synthase 3054647..3055840 Methylobacterium extorquens CM4 7115713 YP_002421674.1 CDS Mchl_2907 NC_011757.1 3055853 3056773 D KEGG: mex:Mext_2680 hypothetical protein; hypothetical protein 3055853..3056773 Methylobacterium extorquens CM4 7115714 YP_002421675.1 CDS Mchl_2908 NC_011757.1 3056805 3057986 D PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_2681 methyltransferase type 11; type 11 methyltransferase 3056805..3057986 Methylobacterium extorquens CM4 7115715 YP_002421676.1 CDS Mchl_2909 NC_011757.1 3057986 3059014 D PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: mex:Mext_2682 oxidoreductase domain-containing protein; oxidoreductase domain-containing protein 3057986..3059014 Methylobacterium extorquens CM4 7115716 YP_002421677.1 CDS Mchl_2910 NC_011757.1 3059207 3060826 D PFAM: protein of unknown function DUF181; KEGG: mex:Mext_2683 hypothetical protein; hypothetical protein 3059207..3060826 Methylobacterium extorquens CM4 7115717 YP_002421678.1 CDS Mchl_2911 NC_011757.1 3060823 3061716 D PFAM: xylose isomerase; KEGG: mex:Mext_2684 xylose isomerase domain-containing protein; xylose isomerase 3060823..3061716 Methylobacterium extorquens CM4 7115718 YP_002421679.1 CDS Mchl_2912 NC_011757.1 3061713 3062951 D PFAM: glycosyl transferase group 1; KEGG: mex:Mext_2685 glycosyl transferase group 1; group 1 glycosyl transferase 3061713..3062951 Methylobacterium extorquens CM4 7115719 YP_002421680.1 CDS Mchl_2913 NC_011757.1 3062948 3063709 D PFAM: LmbE family protein; KEGG: mex:Mext_2686 LmbE family protein; LmbE family protein 3062948..3063709 Methylobacterium extorquens CM4 7115720 YP_002421681.1 CDS Mchl_2914 NC_011757.1 3063693 3064319 D PFAM: uracil-DNA glycosylase superfamily; KEGG: mex:Mext_2687 uracil-DNA glycosylase superfamily protein; uracil-DNA glycosylase superfamily protein 3063693..3064319 Methylobacterium extorquens CM4 7115721 YP_002421682.1 CDS Mchl_2915 NC_011757.1 3064531 3065562 D KEGG: mex:Mext_2688 hypothetical protein; hypothetical protein 3064531..3065562 Methylobacterium extorquens CM4 7115722 YP_002421683.1 CDS Mchl_2916 NC_011757.1 3065586 3066878 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; KEGG: mex:Mext_2689 histidine kinase; PAS/PAC sensor signal transduction histidine kinase 3065586..3066878 Methylobacterium extorquens CM4 7115723 YP_002421684.1 CDS Mchl_2917 NC_011757.1 3067080 3069578 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mex:Mext_2690 ATPase P; ATPase P 3067080..3069578 Methylobacterium extorquens CM4 7115724 YP_002421685.1 CDS Mchl_2918 NC_011757.1 3069575 3070039 D TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; KEGG: mex:Mext_2691 Cu(I)-responsive transcriptional regulator; MerR family transcriptional regulator 3069575..3070039 Methylobacterium extorquens CM4 7115725 YP_002421686.1 CDS Mchl_2919 NC_011757.1 3070127 3071293 D KEGG: mex:Mext_2692 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3070127..3071293 Methylobacterium extorquens CM4 7115726 YP_002421687.1 CDS Mchl_2920 NC_011757.1 3071348 3073027 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mpo:Mpop_2816 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3071348..3073027) Methylobacterium extorquens CM4 7115727 YP_002421688.1 CDS Mchl_2921 NC_011757.1 3073189 3074214 R TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: mex:Mext_2695 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B complement(3073189..3074214) Methylobacterium extorquens CM4 7115728 YP_002421689.1 CDS Mchl_2922 NC_011757.1 3074423 3074860 R PFAM: ribosome-binding factor A; KEGG: mex:Mext_2696 ribosome-binding factor A; ribosome-binding factor A complement(3074423..3074860) Methylobacterium extorquens CM4 7115729 YP_002421690.1 CDS Mchl_2923 NC_011757.1 3074963 3077932 R TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; GTP-binding protein HSR1-related; elongation factor Tu domain 2 protein; translation initiation factor IF-2 domain protein; Initiation factor 2 associated domain protein ; Miro domain protein; KEGG: mex:Mext_2697 translation initiation factor IF-2; translation initiation factor IF-2 complement(3074963..3077932) Methylobacterium extorquens CM4 7115730 YP_002421691.1 CDS Mchl_2924 NC_011757.1 3077997 3078740 R PFAM: protein of unknown function DUF448; KEGG: mex:Mext_2698 hypothetical protein; hypothetical protein complement(3077997..3078740) Methylobacterium extorquens CM4 7115731 YP_002421692.1 CDS Mchl_2925 NC_011757.1 3078782 3080419 R KEGG: mex:Mext_2699 transcription termination factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH type 1 domain protein; NusA domain protein; SMART: KH domain protein; NusA antitermination factor complement(3078782..3080419) Methylobacterium extorquens CM4 7115732 YP_002421693.1 CDS Mchl_2926 NC_011757.1 3080533 3081288 R PFAM: protein of unknown function DUF150; KEGG: mex:Mext_2700 hypothetical protein; hypothetical protein complement(3080533..3081288) Methylobacterium extorquens CM4 7115733 YP_002421694.1 CDS Mchl_2927 NC_011757.1 3081554 3082207 D KEGG: mex:Mext_2701 streptogramin A acetyltransferase; streptogramin A acetyltransferase 3081554..3082207 Methylobacterium extorquens CM4 7115734 YP_002421695.1 CDS Mchl_2928 NC_011757.1 3082144 3082320 R hypothetical protein complement(3082144..3082320) Methylobacterium extorquens CM4 7115735 YP_002421696.1 CDS Mchl_2929 NC_011757.1 3082535 3083569 R TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: semialdehyde dehydrogenase NAD - binding; semialdehyde dehydrogenase dimerisation region; KEGG: mex:Mext_2702 aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase complement(3082535..3083569) Methylobacterium extorquens CM4 7115736 YP_002421697.1 CDS Mchl_2930 NC_011757.1 3083936 3084778 D KEGG: mex:Mext_2703 hypothetical protein; hypothetical protein 3083936..3084778 Methylobacterium extorquens CM4 7115737 YP_002421698.1 CDS Mchl_2931 NC_011757.1 3084892 3085305 D KEGG: mex:Mext_2704 hypothetical protein; hypothetical protein 3084892..3085305 Methylobacterium extorquens CM4 7115738 YP_002421699.1 CDS Mchl_2932 NC_011757.1 3085369 3085917 R PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2705 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(3085369..3085917) Methylobacterium extorquens CM4 7115739 YP_002421700.1 CDS Mchl_2933 NC_011757.1 3086001 3086294 R KEGG: mex:Mext_2706 hypothetical protein; hypothetical protein complement(3086001..3086294) Methylobacterium extorquens CM4 7115740 YP_002421701.1 CDS Mchl_2934 NC_011757.1 3086413 3087633 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_2707 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K complement(3086413..3087633) Methylobacterium extorquens CM4 7115741 YP_002421702.1 CDS Mchl_2935 NC_011757.1 3087859 3088485 D PFAM: regulatory protein TetR; KEGG: mex:Mext_2708 regulatory protein TetR; TetR family transcriptional regulator 3087859..3088485 Methylobacterium extorquens CM4 7115742 YP_002421703.1 CDS Mchl_2936 NC_011757.1 3088652 3089131 D KEGG: mex:Mext_2709 hypothetical protein; hypothetical protein 3088652..3089131 Methylobacterium extorquens CM4 7115743 YP_002421704.1 CDS Mchl_2937 NC_011757.1 3089385 3091190 D KEGG: mex:Mext_2710 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose trehalohydrolase 3089385..3091190 Methylobacterium extorquens CM4 7115744 YP_002421705.1 CDS Mchl_2938 NC_011757.1 3091187 3096127 D amylomaltase; acts to release glucose from maltodextrins; bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase 3091187..3096127 Methylobacterium extorquens CM4 7115745 YP_002421706.1 CDS Mchl_2939 NC_011757.1 3096265 3099639 D PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mex:Mext_2712 alpha amylase catalytic region; alpha amylase catalytic subunit 3096265..3099639 Methylobacterium extorquens CM4 7115746 YP_002421707.1 CDS Mchl_2940 NC_011757.1 3099811 3103077 D KEGG: mex:Mext_2713 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused maltokinase; PFAM: aminoglycoside phosphotransferase; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; trehalose synthase 3099811..3103077 Methylobacterium extorquens CM4 7115747 YP_002421708.1 CDS Mchl_2941 NC_011757.1 3103140 3105494 D KEGG: mex:Mext_2714 1,4-alpha-glucan branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; 1,4-alpha-glucan branching protein 3103140..3105494 Methylobacterium extorquens CM4 7115748 YP_002421709.1 CDS Mchl_2942 NC_011757.1 3105516 3105845 R PFAM: protein of unknown function UPF0060; KEGG: mex:Mext_2715 hypothetical protein; hypothetical protein complement(3105516..3105845) Methylobacterium extorquens CM4 7115749 YP_002421710.1 CDS Mchl_2943 NC_011757.1 3105940 3106212 R KEGG: mpo:Mpop_2838 hypothetical protein; hypothetical protein complement(3105940..3106212) Methylobacterium extorquens CM4 7115750 YP_002421711.1 CDS Mchl_2944 NC_011757.1 3106317 3107432 D KEGG: mex:Mext_2717 radical SAM domain-containing protein; radical SAM domain-containing protein 3106317..3107432 Methylobacterium extorquens CM4 7115751 YP_002421712.1 CDS Mchl_2945 NC_011757.1 3107464 3108228 R PFAM: endonuclease III FCL domain protein; SMART: HhH-GPD family protein; KEGG: mex:Mext_2718 HhH-GPD family protein; endonuclease III FCL domain-containing protein complement(3107464..3108228) Methylobacterium extorquens CM4 7115752 YP_002421713.1 CDS Mchl_2946 NC_011757.1 3108278 3109174 R PFAM: transcription activator effector binding; KEGG: mex:Mext_2719 transcription activator effector binding; transcription activator effector binding complement(3108278..3109174) Methylobacterium extorquens CM4 7115753 YP_002421714.1 CDS Mchl_2947 NC_011757.1 3109248 3110138 D PFAM: diaminopimelate epimerase; KEGG: mex:Mext_2720 diaminopimelate epimerase; diaminopimelate epimerase 3109248..3110138 Methylobacterium extorquens CM4 7115754 YP_002421715.1 CDS Mchl_2948 NC_011757.1 3110135 3111367 D KEGG: mex:Mext_2721 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: radical SAM protein; protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein 3110135..3111367 Methylobacterium extorquens CM4 7115755 YP_002421716.1 CDS Mchl_2949 NC_011757.1 3111408 3112127 R PFAM: pseudouridine synthase; KEGG: mex:Mext_2722 pseudouridine synthase; pseudouridine synthase complement(3111408..3112127) Methylobacterium extorquens CM4 7115756 YP_002421717.1 CDS Mchl_2950 NC_011757.1 3112201 3113667 D KEGG: mex:Mext_2723 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA; signal recognition particle-docking protein FtsY 3112201..3113667 Methylobacterium extorquens CM4 7115757 YP_002421718.1 CDS Mchl_2951 NC_011757.1 3113707 3114327 D TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; KEGG: mex:Mext_2724 intracellular septation protein A; intracellular septation protein A 3113707..3114327 Methylobacterium extorquens CM4 7118012 YP_002421719.1 CDS Mchl_2952 NC_011757.1 3114335 3115234 R PFAM: hydroxyneurosporene synthase; KEGG: mex:Mext_2725 hydroxyneurosporene synthase; hydroxyneurosporene synthase complement(3114335..3115234) Methylobacterium extorquens CM4 7118147 YP_002421720.1 CDS Mchl_2953 NC_011757.1 3115231 3116730 R TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_2726 phytoene desaturase; phytoene desaturase complement(3115231..3116730) Methylobacterium extorquens CM4 7118148 YP_002421721.1 CDS Mchl_2954 NC_011757.1 3116836 3117702 D PFAM: polyprenyl synthetase; KEGG: mex:Mext_2727 polyprenyl synthetase; polyprenyl synthetase 3116836..3117702 Methylobacterium extorquens CM4 7118149 YP_002421722.1 CDS Mchl_2955 NC_011757.1 3117712 3118869 D PFAM: O-methyltransferase family 2; methyltransferase type 12; KEGG: mex:Mext_2728 O-methyltransferase family protein; O-methyltransferase family 2 3117712..3118869 Methylobacterium extorquens CM4 7118150 YP_002421723.1 CDS Mchl_2956 NC_011757.1 3118969 3119907 D TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_2729 chlorophyll synthesis pathway, BchC; chlorophyll synthesis pathway, BchC 3118969..3119907 Methylobacterium extorquens CM4 7118151 YP_002421724.1 CDS Mchl_2957 NC_011757.1 3119904 3120908 D KEGG: mex:Mext_2730 chlorophyllide reductase iron protein subunit X; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein; chlorophyllide reductase iron protein subunit X 3119904..3120908 Methylobacterium extorquens CM4 7118152 YP_002421725.1 CDS Mchl_2958 NC_011757.1 3120912 3122438 D TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase component 1; KEGG: mex:Mext_2731 chlorophyllide reductase subunit Y; chlorophyllide reductase subunit Y 3120912..3122438 Methylobacterium extorquens CM4 7118153 YP_002421726.1 CDS Mchl_2959 NC_011757.1 3122438 3123904 D TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1; protein of unknown function DUF1197; KEGG: mex:Mext_2732 chlorophyllide reductase subunit Z; chlorophyllide reductase subunit Z 3122438..3123904 Methylobacterium extorquens CM4 7118154 YP_002421727.1 CDS Mchl_2960 NC_011757.1 3123976 3124209 D KEGG: mex:Mext_2733 hypothetical protein; hypothetical protein 3123976..3124209 Methylobacterium extorquens CM4 7118155 YP_002421728.1 CDS Mchl_2961 NC_011757.1 3124379 3124609 D PFAM: antenna complex alpha/subunit beta; KEGG: mex:Mext_2734 antenna complex alpha/subunit beta; antenna complex alpha/subunit beta 3124379..3124609 Methylobacterium extorquens CM4 7118156 YP_002421729.1 CDS Mchl_2962 NC_011757.1 3124621 3124809 D PFAM: antenna complex alpha/subunit beta; KEGG: mex:Mext_2735 antenna complex alpha/subunit beta; antenna complex alpha/subunit beta 3124621..3124809 Methylobacterium extorquens CM4 7118157 YP_002421730.1 CDS Mchl_2963 NC_011757.1 3124885 3125709 D TIGRFAM: photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; KEGG: mex:Mext_2736 photosynthetic reaction center subunit L; photosynthetic reaction center subunit L 3124885..3125709 Methylobacterium extorquens CM4 7118158 YP_002421731.1 CDS Mchl_2964 NC_011757.1 3125832 3126809 D TIGRFAM: photosynthetic reaction center, M subunit; PFAM: photosynthetic reaction centre protein; KEGG: mpo:Mpop_2859 photosynthetic reaction center, M subunit; photosynthetic reaction center subunit M 3125832..3126809 Methylobacterium extorquens CM4 7118159 YP_002421732.1 CDS Mchl_2966 NC_011757.1 3128314 3130062 D KEGG: mex:Mext_2739 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: ATPase AAA; type I secretion system ATPase 3128314..3130062 Methylobacterium extorquens CM4 7118161 YP_002421733.1 CDS Mchl_2967 NC_011757.1 3130062 3131408 D TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD; KEGG: mex:Mext_2740 HlyD family type I secretion membrane fusion protein; HlyD family type I secretion membrane fusion protein 3130062..3131408 Methylobacterium extorquens CM4 7118162 YP_002421734.1 CDS rpmJ NC_011757.1 3131561 3131686 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 3131561..3131686 Methylobacterium extorquens CM4 7118163 YP_002421735.1 CDS Mchl_2969 NC_011757.1 3131764 3132372 D PFAM: hypotheticalprotein; Tetratricopeptide TPR_2 repeat protein; SMART: hypothetical protein; KEGG: mex:Mext_2742 hypotheticalprotein; hypothetical protein 3131764..3132372 Methylobacterium extorquens CM4 7118164 YP_002421736.1 CDS Mchl_2970 NC_011757.1 3132383 3133378 D PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_2743 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3132383..3133378 Methylobacterium extorquens CM4 7118165 YP_002421737.1 CDS Mchl_2971 NC_011757.1 3133430 3134866 R KEGG: mex:Mext_2744 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta; pyruvate kinase complement(3133430..3134866) Methylobacterium extorquens CM4 7118166 YP_002421738.1 CDS Mchl_2972 NC_011757.1 3135234 3136091 D KEGG: mex:Mext_2745 porin; porin 3135234..3136091 Methylobacterium extorquens CM4 7118167 YP_002421739.1 CDS Mchl_2973 NC_011757.1 3136419 3136874 R PFAM: protein of unknown function DUF1036; KEGG: mex:Mext_2746 hypothetical protein; hypothetical protein complement(3136419..3136874) Methylobacterium extorquens CM4 7118168 YP_002421740.1 CDS Mchl_2974 NC_011757.1 3136927 3138240 R PFAM: MOFRL domain protein; KEGG: mex:Mext_2747 hydroxypyruvate reductase; hydroxypyruvate reductase complement(3136927..3138240) Methylobacterium extorquens CM4 7118169 YP_002421741.1 CDS Mchl_2975 NC_011757.1 3138468 3139241 D PFAM: N-formylglutamate amidohydrolase; KEGG: mex:Mext_2748 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 3138468..3139241 Methylobacterium extorquens CM4 7118170 YP_002421742.1 CDS Mchl_2976 NC_011757.1 3139312 3139620 D PFAM: protein of unknown function DUF1244; KEGG: mex:Mext_2749 hypothetical protein; hypothetical protein 3139312..3139620 Methylobacterium extorquens CM4 7118171 YP_002421743.1 CDS Mchl_2977 NC_011757.1 3139724 3139990 D KEGG: mpo:Mpop_2872 hypothetical protein; hypothetical protein 3139724..3139990 Methylobacterium extorquens CM4 7118172 YP_002421744.1 CDS Mchl_2978 NC_011757.1 3140212 3141702 R PFAM: protein of unknown function DUF882; peptidase M15A; KEGG: mex:Mext_2751 hypothetical protein; hypothetical protein complement(3140212..3141702) Methylobacterium extorquens CM4 7118173 YP_002421745.1 CDS Mchl_2979 NC_011757.1 3141938 3143884 R PFAM: peptidoglycan-binding protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2752 peptidoglycan binding domain-containing protein; ErfK/YbiS/YcfS/YnhG family protein complement(3141938..3143884) Methylobacterium extorquens CM4 7118174 YP_002421746.1 CDS Mchl_2980 NC_011757.1 3144131 3145621 R PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: mex:Mext_2753 sigma-54 factor interaction domain-containing protein; Fis family transcriptional regulator complement(3144131..3145621) Methylobacterium extorquens CM4 7118175 YP_002421747.1 CDS Mchl_2981 NC_011757.1 3145950 3147827 D TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase F; KEGG: mex:Mext_2754 PepF/M3 family oligoendopeptidase; oligoendopeptidase, pepF/M3 family 3145950..3147827 Methylobacterium extorquens CM4 7118176 YP_002421748.1 CDS Mchl_2982 NC_011757.1 3147896 3148120 D TIGRFAM: addiction module antidote; PFAM: SpoVT/AbrB domain protein; KEGG: bra:BRADO1193 AbrB family transcriptional regulator; MazE family transcriptional regulator 3147896..3148120 Methylobacterium extorquens CM4 7118177 YP_002421749.1 CDS Mchl_2983 NC_011757.1 3148117 3148503 D TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; KEGG: mpo:Mpop_2879 death-on-curing family protein; death-on-curing family protein 3148117..3148503 Methylobacterium extorquens CM4 7118178 YP_002421750.1 CDS Mchl_2984 NC_011757.1 3148596 3149966 D PFAM: ABC transporter; KEGG: mex:Mext_2757 hypothetical protein; ABC transporter 3148596..3149966 Methylobacterium extorquens CM4 7118179 YP_002421751.1 CDS Mchl_2985 NC_011757.1 3150079 3150372 D KEGG: mex:Mext_2758 hypothetical protein; hypothetical protein 3150079..3150372 Methylobacterium extorquens CM4 7118180 YP_002421752.1 CDS Mchl_2986 NC_011757.1 3150484 3151623 D PFAM: alanine dehydrogenase/PNT domain protein; KEGG: mex:Mext_2759 NAD(P)(+) transhydrogenase (AB-specific); NAD(P)(+) transhydrogenase 3150484..3151623 Methylobacterium extorquens CM4 7118181 YP_002421753.1 CDS Mchl_2987 NC_011757.1 3151645 3152097 D KEGG: mex:Mext_2760 PntAB, NAD(P) transhydrogenase, alpha2 subunit; PntAB, NAD(P) transhydrogenase, alpha2 subunit 3151645..3152097 Methylobacterium extorquens CM4 7118182 YP_002421754.1 CDS Mchl_2988 NC_011757.1 3152102 3153502 D PFAM: NAD(P) transhydrogenase subunit beta; KEGG: mex:Mext_2761 NAD(P)(+) transhydrogenase (AB-specific); NAD(P)(+) transhydrogenase 3152102..3153502 Methylobacterium extorquens CM4 7118183 YP_002421755.1 CDS Mchl_2989 NC_011757.1 3153597 3155432 D TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: mex:Mext_2762 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 3153597..3155432 Methylobacterium extorquens CM4 7118184 YP_002421756.1 CDS Mchl_2990 NC_011757.1 3155890 3156624 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_2763 cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 3155890..3156624 Methylobacterium extorquens CM4 7118186 YP_002421757.1 CDS Mchl_2991 NC_011757.1 3156676 3157380 D PFAM: HWE histidine kinase; KEGG: mex:Mext_2764 HWE histidine kinase; signal transduction histidine kinase 3156676..3157380 Methylobacterium extorquens CM4 7118187 YP_002421758.1 CDS Mchl_2992 NC_011757.1 3157584 3159569 D PFAM: surface antigen (D15); KEGG: mex:Mext_2765 surface antigen (D15); surface antigen (D15) 3157584..3159569 Methylobacterium extorquens CM4 7118188 YP_002421759.1 CDS Mchl_2993 NC_011757.1 3159570 3163961 D PFAM: protein of unknown function DUF490; KEGG: mex:Mext_2766 hypothetical protein; hypothetical protein 3159570..3163961 Methylobacterium extorquens CM4 7118189 YP_002421760.1 CDS Mchl_2994 NC_011757.1 3164431 3164691 D KEGG: mpo:Mpop_2890 hypothetical protein; hypothetical protein 3164431..3164691 Methylobacterium extorquens CM4 7118190 YP_002421761.1 CDS Mchl_2995 NC_011757.1 3164884 3165153 D KEGG: mex:Mext_2768 hypothetical protein; hypothetical protein 3164884..3165153 Methylobacterium extorquens CM4 7118191 YP_002421762.1 CDS Mchl_2996 NC_011757.1 3165255 3165743 R catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase complement(3165255..3165743) Methylobacterium extorquens CM4 7118192 YP_002421763.1 CDS Mchl_2997 NC_011757.1 3166032 3167921 D KEGG: mex:Mext_2770 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; ATPase AAA; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; ATPase AAA; PAS/PAC sensor protein 3166032..3167921 Methylobacterium extorquens CM4 7118193 YP_002421764.1 CDS Mchl_2998 NC_011757.1 3168006 3169610 D PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_2771 carbohydrate-selective porin OprB; carbohydrate-selective porin OprB 3168006..3169610 Methylobacterium extorquens CM4 7118194 YP_002421765.1 CDS Mchl_2999 NC_011757.1 3169635 3170693 R PFAM: Di-haem cytochrome C peroxidase; KEGG: mex:Mext_2772 cytochrome-c peroxidase; cytochrome-c peroxidase complement(3169635..3170693) Methylobacterium extorquens CM4 7118195 YP_002421766.1 CDS Mchl_3000 NC_011757.1 3170863 3171234 R KEGG: mex:Mext_2773 hypothetical protein; hypothetical protein complement(3170863..3171234) Methylobacterium extorquens CM4 7118196 YP_002421767.1 CDS Mchl_3001 NC_011757.1 3171418 3174282 D KEGG: mex:Mext_2774 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3171418..3174282 Methylobacterium extorquens CM4 7118197 YP_002421768.1 CDS Mchl_3002 NC_011757.1 3174517 3175374 D PFAM: manganese containing catalase; KEGG: mex:Mext_2775 catalase; catalase 3174517..3175374 Methylobacterium extorquens CM4 7118198 YP_002421769.1 CDS Mchl_3003 NC_011757.1 3175453 3175962 D PFAM: protein of unknown function DUF892; KEGG: mex:Mext_2776 hypothetical protein; hypothetical protein 3175453..3175962 Methylobacterium extorquens CM4 7118199 YP_002421770.1 CDS Mchl_3004 NC_011757.1 3176152 3176823 R KEGG: mex:Mext_2777 hypothetical protein; hypothetical protein complement(3176152..3176823) Methylobacterium extorquens CM4 7118200 YP_002421771.1 CDS Mchl_3005 NC_011757.1 3176912 3177163 D KEGG: mex:Mext_2778 hypothetical protein; hypothetical protein 3176912..3177163 Methylobacterium extorquens CM4 7118201 YP_002421772.1 CDS Mchl_3006 NC_011757.1 3177552 3179396 D PFAM: CBS domain containing protein; chloride channel core; KEGG: mex:Mext_2779 chloride channel core; chloride channel core 3177552..3179396 Methylobacterium extorquens CM4 7118203 YP_002421773.1 CDS Mchl_3007 NC_011757.1 3179425 3179913 D KEGG: mex:Mext_2780 hypothetical protein; hypothetical protein 3179425..3179913 Methylobacterium extorquens CM4 7118204 YP_002421774.1 CDS Mchl_3008 NC_011757.1 3179924 3180772 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 3179924..3180772 Methylobacterium extorquens CM4 7118205 YP_002421775.1 CDS Mchl_3009 NC_011757.1 3180949 3181260 D KEGG: mex:Mext_2782 transmembrane protein; transmembrane protein 3180949..3181260 Methylobacterium extorquens CM4 7118206 YP_002421776.1 CDS Mchl_3010 NC_011757.1 3181325 3181573 D hypothetical protein 3181325..3181573 Methylobacterium extorquens CM4 7118207 YP_002421777.1 CDS Mchl_3011 NC_011757.1 3181592 3182053 R NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(3181592..3182053) Methylobacterium extorquens CM4 7118208 YP_002421778.1 CDS eno NC_011757.1 3182345 3183634 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 3182345..3183634 Methylobacterium extorquens CM4 7118209 YP_002421779.1 CDS Mchl_3013 NC_011757.1 3183770 3184081 D PFAM: septum formation initiator; KEGG: mex:Mext_2785 septum formation initiator; septum formation initiator 3183770..3184081 Methylobacterium extorquens CM4 7118210 YP_002421780.1 CDS Mchl_3014 NC_011757.1 3184257 3185306 D KEGG: mex:Mext_2786 pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; PFAM: dehydrogenase E1 component; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 3184257..3185306 Methylobacterium extorquens CM4 7118211 YP_002421781.1 CDS Mchl_3015 NC_011757.1 3185412 3186860 D catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 3185412..3186860 Methylobacterium extorquens CM4 7118212 YP_002421782.1 CDS Mchl_3016 NC_011757.1 3186871 3187149 D KEGG: mex:Mext_2788 hypothetical protein; hypothetical protein 3186871..3187149 Methylobacterium extorquens CM4 7118213 YP_002421783.1 CDS Mchl_3017 NC_011757.1 3187183 3188595 D KEGG: mex:Mext_2789 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 3187183..3188595 Methylobacterium extorquens CM4 7118214 YP_002421784.1 CDS Mchl_3018 NC_011757.1 3188758 3190197 D E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 3188758..3190197 Methylobacterium extorquens CM4 7118215 YP_002421785.1 CDS Mchl_3019 NC_011757.1 3190408 3190611 D KEGG: mex:Mext_2791 hypothetical protein; hypothetical protein 3190408..3190611 Methylobacterium extorquens CM4 7118216 YP_002421786.1 CDS Mchl_3020 NC_011757.1 3190708 3191220 R KEGG: mex:Mext_2792 hypothetical protein; hypothetical protein complement(3190708..3191220) Methylobacterium extorquens CM4 7118217 YP_002421787.1 CDS Mchl_3021 NC_011757.1 3191506 3192009 D KEGG: mex:Mext_2793 endo-1,4-beta-glucanase; endo-1,4-beta-glucanase 3191506..3192009 Methylobacterium extorquens CM4 7118218 YP_002421788.1 CDS Mchl_3022 NC_011757.1 3192127 3192387 D KEGG: mex:Mext_2794 hypothetical protein; hypothetical protein 3192127..3192387 Methylobacterium extorquens CM4 7118219 YP_002421789.1 CDS Mchl_3023 NC_011757.1 3192466 3193110 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2795 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 3192466..3193110 Methylobacterium extorquens CM4 7118220 YP_002421790.1 CDS Mchl_3024 NC_011757.1 3193280 3194626 R KEGG: mex:Mext_2796 L-sorbosone dehydrogenase; L-sorbosone dehydrogenase complement(3193280..3194626) Methylobacterium extorquens CM4 7118221 YP_002421791.1 CDS Mchl_3025 NC_011757.1 3194648 3194860 R KEGG: mex:Mext_2797 hypothetical protein; hypothetical protein complement(3194648..3194860) Methylobacterium extorquens CM4 7118222 YP_002421792.1 CDS Mchl_3026 NC_011757.1 3195060 3195797 D PFAM: cell wall hydrolase SleB; KEGG: mex:Mext_2798 cell wall hydrolase SleB; cell wall hydrolase SleB 3195060..3195797 Methylobacterium extorquens CM4 7118223 YP_002421793.1 CDS Mchl_3027 NC_011757.1 3195931 3196950 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 3195931..3196950 Methylobacterium extorquens CM4 7118224 YP_002421794.1 CDS Mchl_3028 NC_011757.1 3196957 3197415 D PFAM: cyclase/dehydrase; KEGG: mex:Mext_2800 cyclase/dehydrase; cyclase/dehydrase 3196957..3197415 Methylobacterium extorquens CM4 7118225 YP_002421795.1 CDS Mchl_3029 NC_011757.1 3197498 3197923 R PFAM: regulatory protein AsnC/Lrp family; KEGG: mex:Mext_2801 AsnC/Lrp family regulatory protein; AsnC family transcriptional regulator complement(3197498..3197923) Methylobacterium extorquens CM4 7118226 YP_002421796.1 CDS Mchl_3030 NC_011757.1 3198081 3199085 D catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase 3198081..3199085 Methylobacterium extorquens CM4 7118227 YP_002421797.1 CDS Mchl_3031 NC_011757.1 3199397 3200437 D PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: mex:Mext_2803 beta-ketoacyl-acyl-carrier-protein synthase I; beta-ketoacyl-acyl-carrier-protein synthase I 3199397..3200437 Methylobacterium extorquens CM4 7118228 YP_002421798.1 CDS Mchl_3032 NC_011757.1 3200457 3200690 D KEGG: mex:Mext_2804 hypothetical protein; hypothetical protein 3200457..3200690 Methylobacterium extorquens CM4 7118310 YP_002421799.1 CDS Mchl_3033 NC_011757.1 3200691 3201737 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: mex:Mext_2805 beta-ketoacyl-acyl-carrier-protein synthase I; beta-ketoacyl-acyl-carrier-protein synthase I 3200691..3201737 Methylobacterium extorquens CM4 7118311 YP_002421800.1 CDS Mchl_3034 NC_011757.1 3201734 3202495 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_2806 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3201734..3202495 Methylobacterium extorquens CM4 7118312 YP_002421801.1 CDS Mchl_3035 NC_011757.1 3202424 3203572 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: mex:Mext_2807 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein complement(3202424..3203572) Methylobacterium extorquens CM4 7118313 YP_002421802.1 CDS Mchl_3036 NC_011757.1 3203979 3204629 D KEGG: mex:Mext_2808 hexapeptide transferase family protein; hexapeptide transferase family protein 3203979..3204629 Methylobacterium extorquens CM4 7118314 YP_002421803.1 CDS Mchl_3037 NC_011757.1 3204820 3206973 R PFAM: hypotheticalprotein; Tetratricopeptide TPR_4; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_2809 hypotheticalprotein; hypothetical protein complement(3204820..3206973) Methylobacterium extorquens CM4 7118315 YP_002421804.1 CDS Mchl_3038 NC_011757.1 3207160 3207498 R KEGG: mex:Mext_2810 hypothetical protein; hypothetical protein complement(3207160..3207498) Methylobacterium extorquens CM4 7118316 YP_002421805.1 CDS Mchl_3039 NC_011757.1 3207495 3209282 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_2811 ABC transporter; ABC transporter complement(3207495..3209282) Methylobacterium extorquens CM4 7118317 YP_002421806.1 CDS Mchl_3040 NC_011757.1 3210173 3210670 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_2813 2Fe-2S iron-sulfur cluster binding domain-containing protein; (2Fe-2S)-binding domain-containing protein 3210173..3210670 Methylobacterium extorquens CM4 7118318 YP_002421807.1 CDS Mchl_3041 NC_011757.1 3210667 3211716 D PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: mex:Mext_2814 molybdopterin dehydrogenase FAD-binding; FAD-binding molybdopterin dehydrogenase 3210667..3211716 Methylobacterium extorquens CM4 7118319 YP_002421808.1 CDS Mchl_3042 NC_011757.1 3211709 3213952 D PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_2815 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 3211709..3213952 Methylobacterium extorquens CM4 7118320 YP_002421809.1 CDS Mchl_3043 NC_011757.1 3214040 3214567 R PFAM: damage inducible protein CinA; KEGG: mex:Mext_2816 CinA domain-containing protein; damage inducible protein CinA complement(3214040..3214567) Methylobacterium extorquens CM4 7118321 YP_002421810.1 CDS Mchl_3044 NC_011757.1 3214564 3215898 R TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MECDP-synthase; KEGG: mex:Mext_2817 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(3214564..3215898) Methylobacterium extorquens CM4 7118322 YP_002421811.1 CDS Mchl_3045 NC_011757.1 3216026 3217054 D TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase; KEGG: mex:Mext_2818 NifR3 family TIM-barrel protein; hypothetical protein 3216026..3217054 Methylobacterium extorquens CM4 7118323 YP_002421812.1 CDS Mchl_3046 NC_011757.1 3217054 3218187 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: mex:Mext_2819 PAS sensor protein; signal transduction histidine kinase, nitrogen specific, NtrB 3217054..3218187 Methylobacterium extorquens CM4 7118324 YP_002421813.1 CDS Mchl_3047 NC_011757.1 3218198 3219670 D KEGG: mex:Mext_2820 nitrogen regulation protein NR(I); TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; Fis family transcriptional regulator 3218198..3219670 Methylobacterium extorquens CM4 7118325 YP_002421814.1 CDS Mchl_3048 NC_011757.1 3219798 3221435 D PFAM: helicase; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: mex:Mext_2821 helicase domain-containing protein; helicase 3219798..3221435 Methylobacterium extorquens CM4 7118326 YP_002421815.1 CDS Mchl_3049 NC_011757.1 3221499 3223898 D KEGG: mex:Mext_2822 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 3221499..3223898 Methylobacterium extorquens CM4 7118327 YP_002421816.1 CDS Mchl_3050 NC_011757.1 3223895 3225265 D PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: mex:Mext_2823 sigma-54 factor interaction domain-containing protein; Fis family transcriptional regulator 3223895..3225265 Methylobacterium extorquens CM4 7118328 YP_002421817.1 CDS Mchl_3051 NC_011757.1 3225574 3225828 D TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: mpo:Mpop_2942 RNA chaperone Hfq; RNA chaperone Hfq 3225574..3225828 Methylobacterium extorquens CM4 7118329 YP_002421818.1 CDS Mchl_3052 NC_011757.1 3225926 3227341 D TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: mex:Mext_2825 GTP-binding protein HflX; GTP-binding proten HflX 3225926..3227341 Methylobacterium extorquens CM4 7118330 YP_002421819.1 CDS Mchl_3053 NC_011757.1 3227488 3229056 R PFAM: xanthine/uracil/vitamin C permease; sulfate transporter; KEGG: mex:Mext_2826 sulfate transporter; sulfate transporter complement(3227488..3229056) Methylobacterium extorquens CM4 7118331 YP_002421820.1 CDS Mchl_3054 NC_011757.1 3229066 3229842 R PFAM: carbonic anhydrase; KEGG: mex:Mext_2827 carbonate dehydratase; carbonate dehydratase complement(3229066..3229842) Methylobacterium extorquens CM4 7118332 YP_002421821.1 CDS Mchl_3055 NC_011757.1 3230118 3230429 R KEGG: mex:Mext_2828 hypothetical protein; hypothetical protein complement(3230118..3230429) Methylobacterium extorquens CM4 7118333 YP_002421822.1 CDS Mchl_3056 NC_011757.1 3231270 3231656 R PFAM: protein of unknown function DUF305; KEGG: mex:Mext_2829 hypothetical protein; hypothetical protein complement(3231270..3231656) Methylobacterium extorquens CM4 7118334 YP_002421823.1 CDS Mchl_3057 NC_011757.1 3231686 3232063 R KEGG: mex:Mext_2830 hypothetical protein; hypothetical protein complement(3231686..3232063) Methylobacterium extorquens CM4 7118335 YP_002421824.1 CDS Mchl_3058 NC_011757.1 3232090 3235290 R PFAM: acriflavin resistance protein; KEGG: mex:Mext_2831 acriflavin resistance protein; acriflavin resistance protein complement(3232090..3235290) Methylobacterium extorquens CM4 7118336 YP_002421825.1 CDS Mchl_3059 NC_011757.1 3235380 3237107 R TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: mex:Mext_2832 RND family efflux transporter MFP subunit; efflux transporter RND family MFP subunit complement(3235380..3237107) Methylobacterium extorquens CM4 7118337 YP_002421826.1 CDS Mchl_3060 NC_011757.1 3238203 3238691 D PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_2834 ROSMUCR transcriptional regulator; MucR family transcriptional regulator 3238203..3238691 Methylobacterium extorquens CM4 7118338 YP_002421827.1 CDS Mchl_3061 NC_011757.1 3238830 3239330 D PFAM: CheW domain protein; KEGG: mex:Mext_2835 CheW domain-containing protein; CheW protein 3238830..3239330 Methylobacterium extorquens CM4 7118339 YP_002421828.1 CDS Mchl_3062 NC_011757.1 3239342 3240799 D PFAM: MCP methyltransferase CheR-type; KEGG: mex:Mext_2836 protein-glutamate O-methyltransferase; CheR-typeMCP methyltransferase 3239342..3240799 Methylobacterium extorquens CM4 7118340 YP_002421829.1 CDS Mchl_3063 NC_011757.1 3240796 3241353 D PFAM: CheW domain protein; KEGG: mex:Mext_2837 CheW domain-containing protein; CheW protein 3240796..3241353 Methylobacterium extorquens CM4 7118341 YP_002421830.1 CDS Mchl_3064 NC_011757.1 3241434 3243182 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_2838 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3241434..3243182 Methylobacterium extorquens CM4 7118342 YP_002421831.1 CDS Mchl_3065 NC_011757.1 3243207 3245453 D PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: mex:Mext_2839 response regulator receiver; CheA signal transduction histidine kinase 3243207..3245453 Methylobacterium extorquens CM4 7118343 YP_002421832.1 CDS Mchl_3066 NC_011757.1 3245450 3246535 D PFAM: CheB methylesterase; response regulator receiver; KEGG: mex:Mext_2840 protein-glutamate methylesterase; response regulator receiver modulated CheB methylesterase 3245450..3246535 Methylobacterium extorquens CM4 7118344 YP_002421833.1 CDS Mchl_3067 NC_011757.1 3246532 3248265 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_2841 ATPase domain-containing protein; response regulator receiver sensor signal transduction histidine kinase 3246532..3248265 Methylobacterium extorquens CM4 7118345 YP_002421834.1 CDS Mchl_3068 NC_011757.1 3248262 3250130 D KEGG: mex:Mext_2842 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase 3248262..3250130 Methylobacterium extorquens CM4 7118346 YP_002421835.1 CDS Mchl_3069 NC_011757.1 3250285 3250458 D PFAM: metallothionein family 14; KEGG: mex:Mext_2843 metallothionein family protein; metallothionein family 14 3250285..3250458 Methylobacterium extorquens CM4 7118347 YP_002421836.1 CDS Mchl_3070 NC_011757.1 3250486 3251802 R PFAM: hypothetical protein; cytochrome C class I; KEGG: mex:Mext_2844 WD-40 repeat-containing protein; hypothetical protein complement(3250486..3251802) Methylobacterium extorquens CM4 7118348 YP_002421837.1 CDS Mchl_3071 NC_011757.1 3252027 3253112 D PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_2845 molybdopterin binding domain-containing protein; molybdopterin binding domain 3252027..3253112 Methylobacterium extorquens CM4 7118349 YP_002421838.1 CDS Mchl_3072 NC_011757.1 3253109 3255079 D TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_2846 molybdenum cofactor synthesis domain-containing protein; molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein 3253109..3255079 Methylobacterium extorquens CM4 7118350 YP_002421839.1 CDS Mchl_3073 NC_011757.1 3255076 3255612 D TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: mex:Mext_2847 molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein B 3255076..3255612 Methylobacterium extorquens CM4 7118351 YP_002421840.1 CDS Mchl_3074 NC_011757.1 3255616 3256866 D TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_2848 molybdenum cofactor synthesis domain-containing protein; molybdenum cofactor synthesis protein 3255616..3256866 Methylobacterium extorquens CM4 7118352 YP_002421841.1 CDS Mchl_3075 NC_011757.1 3256921 3257961 R PFAM: regulatory protein LysR; KEGG: mex:Mext_2849 regulatory protein LysR; transcriptional regulator of molybdate metabolism, LysR family complement(3256921..3257961) Methylobacterium extorquens CM4 7118353 YP_002421842.1 CDS Mchl_3076 NC_011757.1 3258087 3258782 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_2850 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 3258087..3258782 Methylobacterium extorquens CM4 7118354 YP_002421843.1 CDS Mchl_3077 NC_011757.1 3258779 3259495 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_2851 ABC transporter; ABC transporter 3258779..3259495 Methylobacterium extorquens CM4 7118355 YP_002421844.1 CDS Mchl_3078 NC_011757.1 3259468 3260295 D PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_2852 extracellular solute-binding protein; family 1 extracellular solute-binding protein 3259468..3260295 Methylobacterium extorquens CM4 7118356 YP_002421845.1 CDS Mchl_3079 NC_011757.1 3260461 3260697 R KEGG: mex:Mext_2853 hypothetical protein; hypothetical protein complement(3260461..3260697) Methylobacterium extorquens CM4 7118357 YP_002421846.1 CDS Mchl_3080 NC_011757.1 3260741 3261385 R PFAM: PRC-barrel domain protein; KEGG: mex:Mext_2854 PRC-barrel domain-containing protein; PRC-barrel domain-containing protein complement(3260741..3261385) Methylobacterium extorquens CM4 7118358 YP_002421847.1 CDS mdoG NC_011757.1 3261454 3263130 R involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G complement(3261454..3263130) Methylobacterium extorquens CM4 7118359 YP_002421848.1 CDS Mchl_3082 NC_011757.1 3263165 3265096 D necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 3263165..3265096 Methylobacterium extorquens CM4 7118360 YP_002421849.1 CDS Mchl_3083 NC_011757.1 3265189 3265656 R KEGG: mex:Mext_2857 hypothetical protein; hypothetical protein complement(3265189..3265656) Methylobacterium extorquens CM4 7118361 YP_002421850.1 CDS Mchl_3084 NC_011757.1 3265746 3266963 R PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mex:Mext_2858 cystathionine gamma-synthase; cystathionine gamma-synthase complement(3265746..3266963) Methylobacterium extorquens CM4 7118362 YP_002421851.1 CDS Mchl_3085 NC_011757.1 3267061 3267576 D PFAM: TspO/MBR family protein; KEGG: mex:Mext_2859 TspO/MBR family protein; TspO and MBR-like protein 3267061..3267576 Methylobacterium extorquens CM4 7118363 YP_002421852.1 CDS Mchl_3086 NC_011757.1 3267692 3268057 R PFAM: response regulator receiver; KEGG: mex:Mext_2860 response regulator receiver; response regulator receiver protein complement(3267692..3268057) Methylobacterium extorquens CM4 7118364 YP_002421853.1 CDS Mchl_3087 NC_011757.1 3268221 3268790 R TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: mex:Mext_2861 hypoxanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase complement(3268221..3268790) Methylobacterium extorquens CM4 7118365 YP_002421854.1 CDS Mchl_3088 NC_011757.1 3268979 3269734 R TIGRFAM: MJ0042 family finger-like protein; KEGG: mex:Mext_2862 zinc finger-domain-containing protein; MJ0042 family finger-like protein complement(3268979..3269734) Methylobacterium extorquens CM4 7118366 YP_002421855.1 CDS Mchl_3089 NC_011757.1 3269892 3270605 D KEGG: mex:Mext_2863 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: ATPase AAA; cell division ATP-binding protein FtsE 3269892..3270605 Methylobacterium extorquens CM4 7118367 YP_002421856.1 CDS Mchl_3090 NC_011757.1 3270602 3271582 D KEGG: mex:Mext_2864 hypothetical protein; hypothetical protein 3270602..3271582 Methylobacterium extorquens CM4 7118368 YP_002421857.1 CDS Mchl_3091 NC_011757.1 3271824 3272528 D PFAM: protein of unknown function DUF218; KEGG: mex:Mext_2865 hypothetical protein; hypothetical protein 3271824..3272528 Methylobacterium extorquens CM4 7118369 YP_002421858.1 CDS Mchl_3092 NC_011757.1 3272622 3272996 R PFAM: response regulator receiver; KEGG: mex:Mext_2866 response regulator receiver; response regulator receiver protein complement(3272622..3272996) Methylobacterium extorquens CM4 7118370 YP_002421859.1 CDS Mchl_3093 NC_011757.1 3273268 3274401 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 3273268..3274401 Methylobacterium extorquens CM4 7118371 YP_002421860.1 CDS proA NC_011757.1 3274541 3275839 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 3274541..3275839 Methylobacterium extorquens CM4 7118372 YP_002421861.1 CDS Mchl_3095 NC_011757.1 3275895 3276452 D TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; KEGG: mex:Mext_2869 nicotinate (nicotinamide) nucleotide adenylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 3275895..3276452 Methylobacterium extorquens CM4 7118373 YP_002421862.1 CDS Mchl_3096 NC_011757.1 3276895 3277197 D TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: mex:Mext_2870 iojap-like protein; iojap-like protein 3276895..3277197 Methylobacterium extorquens CM4 7118374 YP_002421863.1 CDS Mchl_3097 NC_011757.1 3277206 3277901 R KEGG: mex:Mext_2871 hypothetical protein; hypothetical protein complement(3277206..3277901) Methylobacterium extorquens CM4 7118375 YP_002421864.1 CDS Mchl_3098 NC_011757.1 3277955 3278515 R KEGG: mex:Mext_2872 transcriptional regulator; transcriptional regulator complement(3277955..3278515) Methylobacterium extorquens CM4 7118376 YP_002421865.1 CDS Mchl_3099 NC_011757.1 3278603 3279643 R PFAM: aldose 1-epimerase; KEGG: mex:Mext_2873 aldose 1-epimerase; aldose 1-epimerase complement(3278603..3279643) Methylobacterium extorquens CM4 7118377 YP_002421866.1 CDS Mchl_3100 NC_011757.1 3279740 3281533 R PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: ATPase AAA; KEGG: mex:Mext_2874 ABC transporter related; ABC transporter complement(3279740..3281533) Methylobacterium extorquens CM4 7118378 YP_002421867.1 CDS Mchl_3101 NC_011757.1 3281806 3282735 D PFAM: periplasmic solute binding protein; KEGG: mex:Mext_2875 periplasmic solute binding protein; periplasmic solute binding protein 3281806..3282735 Methylobacterium extorquens CM4 7118379 YP_002421868.1 CDS Mchl_3102 NC_011757.1 3282858 3283118 R TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: mpo:Mpop_2999 molybdopterin converting factor, subunit 1; molybdopterin converting factor subunit 1 complement(3282858..3283118) Methylobacterium extorquens CM4 7118380 YP_002421869.1 CDS Mchl_3103 NC_011757.1 3283164 3283763 R TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mex:Mext_2877 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase complement(3283164..3283763) Methylobacterium extorquens CM4 7118381 YP_002421870.1 CDS Mchl_3104 NC_011757.1 3283849 3285897 R TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: mex:Mext_2878 excinuclease ABC, C subunit; excinuclease ABC subunit C complement(3283849..3285897) Methylobacterium extorquens CM4 7118382 YP_002421871.1 CDS Mchl_3105 NC_011757.1 3285993 3286718 R KEGG: mex:Mext_2879 hypothetical protein; chemotaxis phosphatase, CheZ complement(3285993..3286718) Methylobacterium extorquens CM4 7118383 YP_002421872.1 CDS Mchl_3106 NC_011757.1 3286948 3287670 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2880 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 3286948..3287670 Methylobacterium extorquens CM4 7118384 YP_002421873.1 CDS Mchl_3107 NC_011757.1 3287750 3288481 R KEGG: mex:Mext_2881 periplasmic ligand-binding sensor protein; periplasmic ligand-binding sensor protein complement(3287750..3288481) Methylobacterium extorquens CM4 7118385 YP_002421874.1 CDS Mchl_3108 NC_011757.1 3288810 3289682 R KEGG: mex:Mext_2882 porin; porin complement(3288810..3289682) Methylobacterium extorquens CM4 7118386 YP_002421875.1 CDS Mchl_3109 NC_011757.1 3290079 3290846 R PFAM: protein of unknown function DUF152; KEGG: mex:Mext_2883 hypothetical protein; hypothetical protein complement(3290079..3290846) Methylobacterium extorquens CM4 7118387 YP_002421876.1 CDS Mchl_3110 NC_011757.1 3290887 3291972 R PFAM: protein of unknown function DUF185; KEGG: mex:Mext_2884 hypothetical protein; hypothetical protein complement(3290887..3291972) Methylobacterium extorquens CM4 7118388 YP_002421877.1 CDS Mchl_3111 NC_011757.1 3291975 3292865 R PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mex:Mext_2885 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase complement(3291975..3292865) Methylobacterium extorquens CM4 7118389 YP_002421878.1 CDS Mchl_3112 NC_011757.1 3293007 3293687 D PFAM: MgtC/SapB transporter; KEGG: mex:Mext_2886 MgtC/SapB transporter; MgtC/SapB transporter 3293007..3293687 Methylobacterium extorquens CM4 7118390 YP_002421879.1 CDS Mchl_3113 NC_011757.1 3293791 3295422 D catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 3293791..3295422 Methylobacterium extorquens CM4 7118842 YP_002421880.1 CDS Mchl_3114 NC_011757.1 3295419 3296690 D KEGG: mex:Mext_2888 hypothetical protein; hypothetical protein 3295419..3296690 Methylobacterium extorquens CM4 7115840 YP_002421881.1 CDS Mchl_3115 NC_011757.1 3296864 3297769 R PFAM: cell wall hydrolase SleB; KEGG: mex:Mext_2889 cell wall hydrolase SleB; cell wall hydrolase SleB complement(3296864..3297769) Methylobacterium extorquens CM4 7114114 YP_002421882.1 CDS Mchl_3116 NC_011757.1 3297876 3298133 R KEGG: mex:Mext_2890 hypothetical protein; hypothetical protein complement(3297876..3298133) Methylobacterium extorquens CM4 7114115 YP_002421883.1 CDS Mchl_3117 NC_011757.1 3298319 3300985 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase complement(3298319..3300985) Methylobacterium extorquens CM4 7114116 YP_002421884.1 CDS Mchl_3118 NC_011757.1 3301203 3301355 R KEGG: mex:Mext_2892 hypothetical protein; hypothetical protein complement(3301203..3301355) Methylobacterium extorquens CM4 7114117 YP_002421885.1 CDS Mchl_3119 NC_011757.1 3301593 3302270 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2893 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(3301593..3302270) Methylobacterium extorquens CM4 7114118 YP_002421886.1 CDS Mchl_3120 NC_011757.1 3302457 3302900 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_2894 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3302457..3302900 Methylobacterium extorquens CM4 7114119 YP_002421887.1 CDS Mchl_3121 NC_011757.1 3302983 3303243 D KEGG: mex:Mext_2895 hypothetical protein; hypothetical protein 3302983..3303243 Methylobacterium extorquens CM4 7114120 YP_002421888.1 CDS Mchl_3122 NC_011757.1 3303289 3303738 R PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_2896 cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(3303289..3303738) Methylobacterium extorquens CM4 7114121 YP_002421889.1 CDS Mchl_3123 NC_011757.1 3303913 3304143 R KEGG: mpo:Mpop_3020 hypothetical protein; hypothetical protein complement(3303913..3304143) Methylobacterium extorquens CM4 7114122 YP_002421890.1 CDS Mchl_3124 NC_011757.1 3304334 3304522 D KEGG: mex:Mext_2898 hypothetical protein; hypothetical protein 3304334..3304522 Methylobacterium extorquens CM4 7114123 YP_002421891.1 CDS Mchl_3125 NC_011757.1 3304645 3305118 R PFAM: regulatory protein MarR; transcriptional regulator TrmB; KEGG: mex:Mext_2899 regulatory protein MarR; TrmB family transcriptional regulator complement(3304645..3305118) Methylobacterium extorquens CM4 7114124 YP_002421892.1 CDS Mchl_3126 NC_011757.1 3305243 3306022 D KEGG: mex:Mext_2900 hypothetical protein; hypothetical protein 3305243..3306022 Methylobacterium extorquens CM4 7114125 YP_002421893.1 CDS Mchl_3127 NC_011757.1 3306042 3306974 R PFAM: beta-lactamase; KEGG: mex:Mext_2901 beta-lactamase domain-containing protein; beta-lactamase complement(3306042..3306974) Methylobacterium extorquens CM4 7114126 YP_002421894.1 CDS Mchl_3128 NC_011757.1 3307054 3308082 R KEGG: mex:Mext_2902 hypothetical protein; hypothetical protein complement(3307054..3308082) Methylobacterium extorquens CM4 7114127 YP_002421895.1 CDS Mchl_3129 NC_011757.1 3308782 3308958 D PFAM: protein of unknown function DUF1328; KEGG: mex:Mext_2903 hypothetical protein; hypothetical protein 3308782..3308958 Methylobacterium extorquens CM4 7114128 YP_002421896.1 CDS Mchl_3130 NC_011757.1 3309037 3309258 R KEGG: mpo:Mpop_3028 hypothetical protein; hypothetical protein complement(3309037..3309258) Methylobacterium extorquens CM4 7114129 YP_002421897.1 CDS Mchl_3131 NC_011757.1 3309438 3310241 D in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 3309438..3310241 Methylobacterium extorquens CM4 7114130 YP_002421898.1 CDS Mchl_3132 NC_011757.1 3310701 3311063 D KEGG: mex:Mext_2906 hypothetical protein; hypothetical protein 3310701..3311063 Methylobacterium extorquens CM4 7114131 YP_002421899.1 CDS Mchl_3133 NC_011757.1 3311160 3311699 R PFAM: protein of unknown function UPF0153; KEGG: mex:Mext_2907 hypothetical protein; hypothetical protein complement(3311160..3311699) Methylobacterium extorquens CM4 7114132 YP_002421900.1 CDS Mchl_3134 NC_011757.1 3311822 3313213 D PFAM: aminotransferase class-III; KEGG: mex:Mext_2908 aminotransferase class-III; class III aminotransferase 3311822..3313213 Methylobacterium extorquens CM4 7114133 YP_002421901.1 CDS Mchl_3135 NC_011757.1 3313560 3313775 D KEGG: mex:Mext_2909 hypothetical protein; hypothetical protein 3313560..3313775 Methylobacterium extorquens CM4 7114134 YP_002421902.1 CDS Mchl_3136 NC_011757.1 3313813 3314727 D PFAM: metallophosphoesterase; KEGG: mex:Mext_2910 metallophosphoesterase; metallophosphoesterase 3313813..3314727 Methylobacterium extorquens CM4 7114135 YP_002421903.1 CDS Mchl_3137 NC_011757.1 3314743 3314961 R KEGG: mex:Mext_2911 hypothetical protein; hypothetical protein complement(3314743..3314961) Methylobacterium extorquens CM4 7114136 YP_002421904.1 CDS Mchl_3138 NC_011757.1 3315018 3315455 R PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2912 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(3315018..3315455) Methylobacterium extorquens CM4 7114137 YP_002421905.1 CDS Mchl_3139 NC_011757.1 3315452 3316378 R PFAM: HhH-GPD family protein; AlkA domain protein; KEGG: mex:Mext_2913 alcohol dehydrogenase; AlkA domain-containing protein complement(3315452..3316378) Methylobacterium extorquens CM4 7114138 YP_002421906.1 CDS Mchl_3140 NC_011757.1 3316428 3316715 R KEGG: mex:Mext_2914 hypothetical protein; hypothetical protein complement(3316428..3316715) Methylobacterium extorquens CM4 7114139 YP_002421907.1 CDS Mchl_3141 NC_011757.1 3316877 3318031 R TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: mex:Mext_2915 ribonuclease D; ribonuclease D complement(3316877..3318031) Methylobacterium extorquens CM4 7114140 YP_002421908.1 CDS Mchl_3142 NC_011757.1 3318127 3318516 R KEGG: mex:Mext_2916 hypothetical protein; hypothetical protein complement(3318127..3318516) Methylobacterium extorquens CM4 7114141 YP_002421909.1 CDS Mchl_3143 NC_011757.1 3318686 3319942 D PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: mex:Mext_2917 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 3318686..3319942 Methylobacterium extorquens CM4 7114142 YP_002421910.1 CDS Mchl_3144 NC_011757.1 3319982 3321880 R PFAM: AsmA family protein; KEGG: mex:Mext_2918 AsmA family protein; AsmA family protein complement(3319982..3321880) Methylobacterium extorquens CM4 7114143 YP_002421911.1 CDS Mchl_3145 NC_011757.1 3322266 3323003 D KEGG: mex:Mext_2919 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase subunit alpha; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit alpha 3322266..3323003 Methylobacterium extorquens CM4 7114144 YP_002421912.1 CDS Mchl_3146 NC_011757.1 3323112 3323771 D KEGG: mex:Mext_2920 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase subunit beta; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit beta 3323112..3323771 Methylobacterium extorquens CM4 7114145 YP_002421913.1 CDS Mchl_3147 NC_011757.1 3323943 3324350 D KEGG: mex:Mext_2921 hypothetical protein; hypothetical protein 3323943..3324350 Methylobacterium extorquens CM4 7114146 YP_002421914.1 CDS Mchl_3148 NC_011757.1 3324940 3326322 D PFAM: PepSY-associated TM helix domain protein; KEGG: mex:Mext_2923 PepSY-associated TM helix domain-containing protein; PepSY-associated TM helix domain-containing protein 3324940..3326322 Methylobacterium extorquens CM4 7114147 YP_002421915.1 CDS Mchl_3149 NC_011757.1 3326383 3328713 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2924 TonB-dependent receptor; TonB-dependent receptor 3326383..3328713 Methylobacterium extorquens CM4 7114148 YP_002421916.1 CDS Mchl_3150 NC_011757.1 3328795 3329751 R KEGG: mex:Mext_2925 hypothetical protein; hypothetical protein complement(3328795..3329751) Methylobacterium extorquens CM4 7114149 YP_002421917.1 CDS Mchl_3151 NC_011757.1 3329726 3330541 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_2926 ABC transporter; ABC transporter complement(3329726..3330541) Methylobacterium extorquens CM4 7114150 YP_002421918.1 CDS Mchl_3152 NC_011757.1 3330538 3331578 R PFAM: transporter permease; KEGG: mex:Mext_2927 transporter permease; transporter permease complement(3330538..3331578) Methylobacterium extorquens CM4 7114151 YP_002421919.1 CDS Mchl_3153 NC_011757.1 3331575 3332408 R PFAM: periplasmic binding protein; KEGG: mex:Mext_2928 periplasmic binding protein; periplasmic binding protein complement(3331575..3332408) Methylobacterium extorquens CM4 7114152 YP_002421920.1 CDS Mchl_3154 NC_011757.1 3332739 3333029 D TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: xfn:XfasM23_1253 addiction module killer protein; addiction module killer protein 3332739..3333029 Methylobacterium extorquens CM4 7114153 YP_002421921.1 CDS Mchl_3155 NC_011757.1 3333032 3333331 D TIGRFAM: addiction module antidote protein; KEGG: mpo:Mpop_4949 transcriptional regulator; transcriptional regulator 3333032..3333331 Methylobacterium extorquens CM4 7114154 YP_002421922.1 CDS guaA NC_011757.1 3333353 3334918 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(3333353..3334918) Methylobacterium extorquens CM4 7114155 YP_002421923.1 CDS Mchl_3157 NC_011757.1 3335088 3335315 D KEGG: mpo:Mpop_3114 hypothetical protein; hypothetical protein 3335088..3335315 Methylobacterium extorquens CM4 7114156 YP_002421924.1 CDS Mchl_3158 NC_011757.1 3335501 3336112 R PFAM: phosphoesterase PA-phosphatase related; KEGG: mex:Mext_2932 phosphoesterase PA-phosphatase related; PA-phosphatase-like phosphoesterase complement(3335501..3336112) Methylobacterium extorquens CM4 7114157 YP_002421925.1 CDS Mchl_3159 NC_011757.1 3336223 3337251 R KEGG: mex:Mext_2933 hypothetical protein; hypothetical protein complement(3336223..3337251) Methylobacterium extorquens CM4 7114158 YP_002421926.1 CDS Mchl_3160 NC_011757.1 3337387 3338736 R PFAM: Fmu (Sun) domain protein; KEGG: mex:Mext_2934 Fmu (Sun) domain-containing protein; Fmu (Sun) domain-containing protein complement(3337387..3338736) Methylobacterium extorquens CM4 7114159 YP_002421927.1 CDS Mchl_3161 NC_011757.1 3338832 3339020 D KEGG: mex:Mext_2935 hypothetical protein; hypothetical protein 3338832..3339020 Methylobacterium extorquens CM4 7114160 YP_002421928.1 CDS Mchl_3162 NC_011757.1 3339124 3340062 R KEGG: mex:Mext_2936 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase complement(3339124..3340062) Methylobacterium extorquens CM4 7114161 YP_002421929.1 CDS Mchl_3163 NC_011757.1 3340269 3341153 D KEGG: mex:Mext_2937 hypothetical protein; hypothetical protein 3340269..3341153 Methylobacterium extorquens CM4 7114162 YP_002421930.1 CDS Mchl_3164 NC_011757.1 3341478 3342323 D KEGG: mex:Mext_2938 hypothetical protein; hypothetical protein 3341478..3342323 Methylobacterium extorquens CM4 7114163 YP_002421931.1 CDS Mchl_3165 NC_011757.1 3342605 3342724 D KEGG: mpo:Mpop_3121 hypothetical protein; hypothetical protein 3342605..3342724 Methylobacterium extorquens CM4 7114164 YP_002421932.1 CDS Mchl_3166 NC_011757.1 3342852 3344342 R KEGG: mex:Mext_2939 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase complement(3342852..3344342) Methylobacterium extorquens CM4 7114165 YP_002421933.1 CDS Mchl_3167 NC_011757.1 3344606 3345772 D PFAM: cell cycle protein; KEGG: mex:Mext_2940 cell cycle protein; cell cycle protein 3344606..3345772 Methylobacterium extorquens CM4 7114166 YP_002421934.1 CDS Mchl_3168 NC_011757.1 3345769 3346878 D KEGG: mex:Mext_2941 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; glycosyltransferase 28 domain; UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 3345769..3346878 Methylobacterium extorquens CM4 7114167 YP_002421935.1 CDS murC NC_011757.1 3347020 3348426 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 3347020..3348426 Methylobacterium extorquens CM4 7114168 YP_002421936.1 CDS Mchl_3170 NC_011757.1 3348443 3348832 R KEGG: mex:Mext_2943 phage-related transcriptional regulator; phage-related transcriptional regulator complement(3348443..3348832) Methylobacterium extorquens CM4 7114169 YP_002421937.1 CDS Mchl_3171 NC_011757.1 3348843 3349049 R KEGG: mex:Mext_2944 hypothetical protein; hypothetical protein complement(3348843..3349049) Methylobacterium extorquens CM4 7114170 YP_002421938.1 CDS Mchl_3172 NC_011757.1 3349145 3350074 D KEGG: mex:Mext_2945 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 3349145..3350074 Methylobacterium extorquens CM4 7114171 YP_002421939.1 CDS ddl NC_011757.1 3350118 3351041 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 3350118..3351041 Methylobacterium extorquens CM4 7114172 YP_002421940.1 CDS Mchl_3174 NC_011757.1 3351008 3351946 D PFAM: cell division protein FtsQ; polypeptide-transport-associated domain protein FtsQ-type; KEGG: mex:Mext_2947 polypeptide-transport-associated domain-containing protein; cell division protein FtsQ 3351008..3351946 Methylobacterium extorquens CM4 7114173 YP_002421941.1 CDS Mchl_3175 NC_011757.1 3352009 3353331 D PFAM: cell division protein FtsA; KEGG: mpo:Mpop_3132 cell division protein FtsA; cell division protein FtsA 3352009..3353331 Methylobacterium extorquens CM4 7114174 YP_002421942.1 CDS Mchl_3176 NC_011757.1 3353537 3355294 D TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: mex:Mext_2949 cell division protein FtsZ; cell division protein FtsZ 3353537..3355294 Methylobacterium extorquens CM4 7114175 YP_002421943.1 CDS lpxC NC_011757.1 3355645 3356592 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3355645..3356592 Methylobacterium extorquens CM4 7114176 YP_002421944.1 CDS Mchl_3178 NC_011757.1 3356758 3357633 D TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: mex:Mext_2951 lipoprotein; outer membrane assembly lipoprotein YfiO 3356758..3357633 Methylobacterium extorquens CM4 7114177 YP_002421945.1 CDS Mchl_3179 NC_011757.1 3357902 3358888 R KEGG: mex:Mext_2953 hypothetical protein; hypothetical protein complement(3357902..3358888) Methylobacterium extorquens CM4 7114178 YP_002421946.1 CDS Mchl_3180 NC_011757.1 3359055 3360755 D TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: mex:Mext_2954 DNA repair protein RecN; DNA repair protein RecN 3359055..3360755 Methylobacterium extorquens CM4 7114179 YP_002421947.1 CDS Mchl_3181 NC_011757.1 3360916 3361209 R KEGG: mpo:Mpop_3139 hypothetical protein; hypothetical protein complement(3360916..3361209) Methylobacterium extorquens CM4 7114180 YP_002421948.1 CDS Mchl_3182 NC_011757.1 3361293 3361565 R PFAM: YiaAB two helix domain protein; KEGG: mex:Mext_2956 YiaAB two helix domain-containing protein; YiaAB helix domain-containing protein complement(3361293..3361565) Methylobacterium extorquens CM4 7114181 YP_002421949.1 CDS Mchl_3183 NC_011757.1 3361597 3362289 R PFAM: PspA/IM30 family protein; KEGG: mex:Mext_2957 PspA/IM30 family protein; phage shock protein PspA complement(3361597..3362289) Methylobacterium extorquens CM4 7114182 YP_002421950.1 CDS Mchl_3184 NC_011757.1 3362431 3364746 R TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mex:Mext_2958 oxidoreductase alpha (molybdopterin) subunit; oxidoreductase alpha (molybdopterin) subunit complement(3362431..3364746) Methylobacterium extorquens CM4 7114183 YP_002421951.1 CDS Mchl_3185 NC_011757.1 3364849 3365925 R KEGG: mex:Mext_2959 hypothetical protein; hypothetical protein complement(3364849..3365925) Methylobacterium extorquens CM4 7114184 YP_002421952.1 CDS Mchl_3186 NC_011757.1 3366271 3368190 D KEGG: mex:Mext_2960 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: heat shock protein 70; chaperone protein DnaK 3366271..3368190 Methylobacterium extorquens CM4 7114185 YP_002421953.1 CDS Mchl_3187 NC_011757.1 3368442 3369599 D TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: mex:Mext_2961 chaperone protein DnaJ; chaperone protein DnaJ 3368442..3369599 Methylobacterium extorquens CM4 7114186 YP_002421954.1 CDS Mchl_3188 NC_011757.1 3369758 3370414 D KEGG: mex:Mext_2962 phospholipid N-methyltransferase; phospholipid N-methyltransferase 3369758..3370414 Methylobacterium extorquens CM4 7114187 YP_002421955.1 CDS Mchl_3189 NC_011757.1 3370680 3371006 D KEGG: mex:Mext_2963 hypothetical protein; hypothetical protein 3370680..3371006 Methylobacterium extorquens CM4 7114188 YP_002421956.1 CDS Mchl_3190 NC_011757.1 3371033 3372343 R KEGG: mex:Mext_2964 thymidine phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; thymidine phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; glycosyl transferase, family 3-like; thymidine phosphorylase complement(3371033..3372343) Methylobacterium extorquens CM4 7114189 YP_002421957.1 CDS Mchl_3191 NC_011757.1 3372340 3373113 R KEGG: mex:Mext_2965 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase complement(3372340..3373113) Methylobacterium extorquens CM4 7114190 YP_002421958.1 CDS Mchl_3192 NC_011757.1 3373123 3373935 R catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase complement(3373123..3373935) Methylobacterium extorquens CM4 7114191 YP_002421959.1 CDS Mchl_3193 NC_011757.1 3373925 3374338 R TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mex:Mext_2967 cytidine deaminase; cytidine deaminase complement(3373925..3374338) Methylobacterium extorquens CM4 7114192 YP_002421960.1 CDS Mchl_3194 NC_011757.1 3374483 3374707 D KEGG: mex:Mext_2968 hypothetical protein; hypothetical protein 3374483..3374707 Methylobacterium extorquens CM4 7114193 YP_002421961.1 CDS Mchl_3195 NC_011757.1 3374790 3375773 R KEGG: mex:Mext_2969 tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase complement(3374790..3375773) Methylobacterium extorquens CM4 7114194 YP_002421962.1 CDS Mchl_3196 NC_011757.1 3375781 3377085 R PFAM: 3-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: mex:Mext_2970 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein complement(3375781..3377085) Methylobacterium extorquens CM4 7117373 YP_002421963.1 CDS Mchl_3197 NC_011757.1 3377082 3377831 R PFAM: protein of unknown function DUF374; KEGG: mex:Mext_2971 hypothetical protein; hypothetical protein complement(3377082..3377831) Methylobacterium extorquens CM4 7117536 YP_002421964.1 CDS Mchl_3198 NC_011757.1 3378069 3379016 D PFAM: metallophosphoesterase; KEGG: mex:Mext_2972 metallophosphoesterase; metallophosphoesterase 3378069..3379016 Methylobacterium extorquens CM4 7117537 YP_002421965.1 CDS Mchl_3199 NC_011757.1 3379032 3379508 R PFAM: response regulator receiver; KEGG: mex:Mext_2973 response regulator receiver; response regulator receiver protein complement(3379032..3379508) Methylobacterium extorquens CM4 7117538 YP_002421966.1 CDS Mchl_3200 NC_011757.1 3379890 3380729 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_2974 cold-shock protein DNA-binding; cold-shock DNA-binding domain-containing protein 3379890..3380729 Methylobacterium extorquens CM4 7117539 YP_002421967.1 CDS Mchl_3201 NC_011757.1 3380857 3381102 D KEGG: mex:Mext_2975 hypothetical protein; hypothetical protein 3380857..3381102 Methylobacterium extorquens CM4 7117540 YP_002421968.1 CDS Mchl_3202 NC_011757.1 3381162 3382571 R PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: mex:Mext_2976 leucyl aminopeptidase; leucyl aminopeptidase complement(3381162..3382571) Methylobacterium extorquens CM4 7117541 YP_002421969.1 CDS Mchl_3203 NC_011757.1 3382669 3383517 D PFAM: hypotheticalprotein; Tetratricopeptide TPR_4; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_2977 hypotheticalprotein; hypothetical protein 3382669..3383517 Methylobacterium extorquens CM4 7117542 YP_002421970.1 CDS rpmB NC_011757.1 3383703 3384008 D required for 70S ribosome assembly; 50S ribosomal protein L28 3383703..3384008 Methylobacterium extorquens CM4 7117543 YP_002421971.1 CDS Mchl_3205 NC_011757.1 3384122 3385051 D PFAM: hypothetical protein; KEGG: mex:Mext_2979 auxin efflux carrier; hypothetical protein 3384122..3385051 Methylobacterium extorquens CM4 7117544 YP_002421972.1 CDS lysK NC_011757.1 3385205 3386908 D class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; lysyl-tRNA synthetase 3385205..3386908 Methylobacterium extorquens CM4 7117545 YP_002421973.1 CDS Mchl_3207 NC_011757.1 3387055 3387609 R KEGG: mex:Mext_2981 hypothetical protein; hypothetical protein complement(3387055..3387609) Methylobacterium extorquens CM4 7117546 YP_002421974.1 CDS Mchl_3208 NC_011757.1 3387789 3388754 D TIGRFAM: peptide chain release factor 2; PFAM: class I peptide chain release factor; PCRF domain protein; KEGG: mex:Mext_2982 peptide chain release factor 2; peptide chain release factor 2 3387789..3388754 Methylobacterium extorquens CM4 7117547 YP_002421975.1 CDS Mchl_3209 NC_011757.1 3388899 3390077 R PFAM: peptidase M23; KEGG: mex:Mext_2983 peptidase M23B; peptidase M23 complement(3388899..3390077) Methylobacterium extorquens CM4 7117548 YP_002421976.1 CDS Mchl_3210 NC_011757.1 3390252 3390719 R PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: mex:Mext_2984 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen complement(3390252..3390719) Methylobacterium extorquens CM4 7117549 YP_002421977.1 CDS Mchl_3211 NC_011757.1 3390870 3394325 D KEGG: mex:Mext_2985 hypothetical protein; hypothetical protein 3390870..3394325 Methylobacterium extorquens CM4 7117550 YP_002421978.1 CDS Mchl_3212 NC_011757.1 3394930 3396006 D PFAM: fatty acid desaturase; KEGG: mex:Mext_2986 fatty acid desaturase; fatty acid desaturase 3394930..3396006 Methylobacterium extorquens CM4 7117551 YP_002421979.1 CDS Mchl_3213 NC_011757.1 3396072 3397343 R KEGG: mex:Mext_2987 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tyrosyl-tRNA synthetase complement(3396072..3397343) Methylobacterium extorquens CM4 7117552 YP_002421980.1 CDS anmK NC_011757.1 3397484 3398617 D catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 3397484..3398617 Methylobacterium extorquens CM4 7117553 YP_002421981.1 CDS Mchl_3215 NC_011757.1 3398627 3399220 D KEGG: mex:Mext_2989 hypothetical protein; hypothetical protein 3398627..3399220 Methylobacterium extorquens CM4 7117554 YP_002421982.1 CDS Mchl_3216 NC_011757.1 3399286 3400386 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 3399286..3400386 Methylobacterium extorquens CM4 7117555 YP_002421983.1 CDS Mchl_3217 NC_011757.1 3400515 3401594 D TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: mex:Mext_2991 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 3400515..3401594 Methylobacterium extorquens CM4 7117556 YP_002421984.1 CDS Mchl_3218 NC_011757.1 3401700 3402629 R PFAM: histone deacetylase superfamily; KEGG: mex:Mext_2993 histone deacetylase superfamily protein; histone deacetylase superfamily protein complement(3401700..3402629) Methylobacterium extorquens CM4 7117557 YP_002421985.1 CDS Mchl_3219 NC_011757.1 3402930 3403568 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2994 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 3402930..3403568 Methylobacterium extorquens CM4 7117558 YP_002421986.1 CDS Mchl_3220 NC_011757.1 3403684 3404199 D KEGG: mex:Mext_2995 hypothetical protein; hypothetical protein 3403684..3404199 Methylobacterium extorquens CM4 7117559 YP_002421987.1 CDS Mchl_3221 NC_011757.1 3404427 3406430 D PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: mex:Mext_2996 carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthase L chain ATP-binding 3404427..3406430 Methylobacterium extorquens CM4 7117560 YP_002421988.1 CDS Mchl_3222 NC_011757.1 3406619 3407050 D PFAM: AIG2 family protein; KEGG: mex:Mext_2997 AIG2 family protein; AIG2 family protein 3406619..3407050 Methylobacterium extorquens CM4 7117561 YP_002421989.1 CDS Mchl_3223 NC_011757.1 3407324 3407608 D PFAM: acylphosphatase; KEGG: mex:Mext_2998 acylphosphatase; acylphosphatase 3407324..3407608 Methylobacterium extorquens CM4 7117562 YP_002421990.1 CDS Mchl_3224 NC_011757.1 3407710 3408423 D PFAM: protein of unknown function DUF599; KEGG: mex:Mext_2999 hypothetical protein; hypothetical protein 3407710..3408423 Methylobacterium extorquens CM4 7117563 YP_002421991.1 CDS Mchl_3225 NC_011757.1 3408413 3408676 D KEGG: mex:Mext_3000 hypothetical protein; hypothetical protein 3408413..3408676 Methylobacterium extorquens CM4 7117564 YP_002421992.1 CDS Mchl_3226 NC_011757.1 3408684 3409481 R PFAM: protein of unknown function DUF218; KEGG: mex:Mext_3001 hypothetical protein; hypothetical protein complement(3408684..3409481) Methylobacterium extorquens CM4 7117565 YP_002421993.1 CDS Mchl_3227 NC_011757.1 3409543 3410166 R PFAM: glutathione S-transferase domain; KEGG: mex:Mext_3002 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein complement(3409543..3410166) Methylobacterium extorquens CM4 7117566 YP_002421994.1 CDS Mchl_3228 NC_011757.1 3410163 3411224 R KEGG: mex:Mext_3003 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: radical SAM domain protein; lysine 2,3-aminomutase YodO family protein complement(3410163..3411224) Methylobacterium extorquens CM4 7117567 YP_002421995.1 CDS Mchl_3229 NC_011757.1 3411221 3412279 R PFAM: tRNA synthetase class II (D K and N); KEGG: mex:Mext_3004 tRNA synthetase class II (D K and N); tRNA synthetase class II (D K and N) complement(3411221..3412279) Methylobacterium extorquens CM4 7117568 YP_002421996.1 CDS Mchl_3230 NC_011757.1 3412403 3412969 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 3412403..3412969 Methylobacterium extorquens CM4 7117569 YP_002421997.1 CDS Mchl_3231 NC_011757.1 3413145 3414131 R PFAM: protein of unknown function DUF1624; KEGG: mex:Mext_3006 hypothetical protein; hypothetical protein complement(3413145..3414131) Methylobacterium extorquens CM4 7117570 YP_002421998.1 CDS Mchl_3232 NC_011757.1 3414554 3415099 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_3007 cold-shock protein DNA-binding; cold-shock DNA-binding domain-containing protein 3414554..3415099 Methylobacterium extorquens CM4 7117571 YP_002421999.1 CDS Mchl_3233 NC_011757.1 3415096 3415626 D PFAM: protein of unknown function DUF192; KEGG: mex:Mext_3008 hypothetical protein; hypothetical protein 3415096..3415626 Methylobacterium extorquens CM4 7117572 YP_002422000.1 CDS Mchl_3235 NC_011757.1 3417369 3418274 D TIGRFAM: magnesium chelatase accessory protein; PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3010 magnesium chelatase accessory protein; magnesium chelatase accessory protein 3417369..3418274 Methylobacterium extorquens CM4 7117574 YP_002422001.1 CDS Mchl_3236 NC_011757.1 3418319 3419845 D TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_3011 phytoene desaturase; phytoene desaturase 3418319..3419845 Methylobacterium extorquens CM4 7117575 YP_002422002.1 CDS Mchl_3237 NC_011757.1 3419826 3420884 D PFAM: Squalene/phytoene synthase; KEGG: mex:Mext_3012 squalene/phytoene synthase; Squalene/phytoene synthase 3419826..3420884 Methylobacterium extorquens CM4 7117576 YP_002422003.1 CDS Mchl_3238 NC_011757.1 3421158 3421772 R TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: mex:Mext_3013 urease accessory protein UreG; urease accessory protein UreG complement(3421158..3421772) Methylobacterium extorquens CM4 7117577 YP_002422004.1 CDS Mchl_3239 NC_011757.1 3421788 3422504 R PFAM: urease accessory protein UreF; KEGG: mex:Mext_3014 urease accessory protein UreF; urease accessory protein UreF complement(3421788..3422504) Methylobacterium extorquens CM4 7117578 YP_002422005.1 CDS Mchl_3240 NC_011757.1 3422455 3422946 R PFAM: urease accessory protein UreE; KEGG: mex:Mext_3015 UreE urease accessory domain-containing protein; urease accessory protein UreE complement(3422455..3422946) Methylobacterium extorquens CM4 7117579 YP_002422006.1 CDS Mchl_3241 NC_011757.1 3422951 3423436 R PFAM: protein of unknown function DUF29; KEGG: npu:Npun_R4412 hypothetical protein; hypothetical protein complement(3422951..3423436) Methylobacterium extorquens CM4 7117580 YP_002422007.1 CDS ureC NC_011757.1 3423469 3425196 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(3423469..3425196) Methylobacterium extorquens CM4 7117581 YP_002422008.1 CDS Mchl_3243 NC_011757.1 3425199 3425759 R PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mex:Mext_3018 metal-dependent phosphohydrolase; metal dependent phosphohydrolase complement(3425199..3425759) Methylobacterium extorquens CM4 7117582 YP_002422009.1 CDS Mchl_3244 NC_011757.1 3425756 3426376 R KEGG: mex:Mext_3019 urease subunit gamma; TIGRFAM: urease subunit beta; urease subunit gamma; PFAM: urease subunit beta; urease subunit gamma region; urease subunit gamma complement(3425756..3426376) Methylobacterium extorquens CM4 7117583 YP_002422010.1 CDS Mchl_3245 NC_011757.1 3426457 3427386 R PFAM: urease accessory protein UreD; KEGG: mex:Mext_3020 urease accessory protein UreD; urease accessory protein UreD complement(3426457..3427386) Methylobacterium extorquens CM4 7117584 YP_002422011.1 CDS Mchl_3246 NC_011757.1 3427596 3428114 D PFAM: flavin reductase domain protein FMN-binding; KEGG: mex:Mext_3021 flavin reductase domain-containing protein; flavin reductase domain-containing FMN-binding protein 3427596..3428114 Methylobacterium extorquens CM4 7117585 YP_002422012.1 CDS Mchl_3247 NC_011757.1 3428273 3428521 R KEGG: mex:Mext_3022 hypothetical protein; hypothetical protein complement(3428273..3428521) Methylobacterium extorquens CM4 7117586 YP_002422013.1 CDS Mchl_3248 NC_011757.1 3429134 3430492 R catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase complement(3429134..3430492) Methylobacterium extorquens CM4 7117587 YP_002422014.1 CDS Mchl_3249 NC_011757.1 3430870 3431490 D KEGG: mex:Mext_3025 hypothetical protein; hypothetical protein 3430870..3431490 Methylobacterium extorquens CM4 7117588 YP_002422015.1 CDS Mchl_3250 NC_011757.1 3431567 3431800 R KEGG: mex:Mext_3026 hypothetical protein; hypothetical protein complement(3431567..3431800) Methylobacterium extorquens CM4 7117589 YP_002422016.1 CDS Mchl_3251 NC_011757.1 3432356 3433369 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3027 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3432356..3433369 Methylobacterium extorquens CM4 7117590 YP_002422017.1 CDS Mchl_3252 NC_011757.1 3433603 3434919 D KEGG: mex:Mext_3028 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 3433603..3434919 Methylobacterium extorquens CM4 7117591 YP_002422018.1 CDS Mchl_3253 NC_011757.1 3434975 3435319 R KEGG: mex:Mext_3029 hypothetical protein; hypothetical protein complement(3434975..3435319) Methylobacterium extorquens CM4 7117592 YP_002422019.1 CDS Mchl_3254 NC_011757.1 3435877 3436104 D KEGG: mex:Mext_3030 hypothetical protein; hypothetical protein 3435877..3436104 Methylobacterium extorquens CM4 7117593 YP_002422020.1 CDS Mchl_3255 NC_011757.1 3436415 3436687 D KEGG: mex:Mext_3031 hypothetical protein; hypothetical protein 3436415..3436687 Methylobacterium extorquens CM4 7117594 YP_002422021.1 CDS Mchl_3256 NC_011757.1 3436758 3438290 R TIGRFAM: threonine dehydratase, biosynthetic; PFAM: threonine dehydratase domain protein; pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: mex:Mext_3032 threonine dehydratase, biosynthetic; threonine dehydratase, biosynthetic complement(3436758..3438290) Methylobacterium extorquens CM4 7117595 YP_002422022.1 CDS Mchl_3257 NC_011757.1 3438391 3438981 R PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_3033 type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(3438391..3438981) Methylobacterium extorquens CM4 7117596 YP_002422023.1 CDS Mchl_3258 NC_011757.1 3439403 3439621 D PFAM: SlyX family protein; KEGG: mex:Mext_3034 SlyX family protein; SlyX family protein 3439403..3439621 Methylobacterium extorquens CM4 7117597 YP_002422024.1 CDS Mchl_3259 NC_011757.1 3439657 3439965 D KEGG: mex:Mext_3035 hypothetical protein; hypothetical protein 3439657..3439965 Methylobacterium extorquens CM4 7117598 YP_002422025.1 CDS Mchl_3260 NC_011757.1 3439987 3440406 R TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: mex:Mext_3036 RNA polymerase-binding protein DksA; TraR/DksA family transcriptional regulator complement(3439987..3440406) Methylobacterium extorquens CM4 7117599 YP_002422026.1 CDS Mchl_3261 NC_011757.1 3440660 3441679 R KEGG: mex:Mext_3037 hypothetical protein; hypothetical protein complement(3440660..3441679) Methylobacterium extorquens CM4 7117600 YP_002422027.1 CDS Mchl_3262 NC_011757.1 3441681 3443054 R PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: mex:Mext_3038 membrane bound O-acyl transferase MBOAT family protein; membrane bound O-acyl transferase MBOAT family protein complement(3441681..3443054) Methylobacterium extorquens CM4 7117601 YP_002422028.1 CDS Mchl_3263 NC_011757.1 3443426 3443722 D KEGG: mex:Mext_3039 hypothetical protein; hypothetical protein 3443426..3443722 Methylobacterium extorquens CM4 7117602 YP_002422029.1 CDS Mchl_3264 NC_011757.1 3443767 3444207 R KEGG: mex:Mext_3040 hypothetical protein; hypothetical protein complement(3443767..3444207) Methylobacterium extorquens CM4 7117603 YP_002422030.1 CDS flgI NC_011757.1 3444461 3445603 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 3444461..3445603 Methylobacterium extorquens CM4 7117604 YP_002422031.1 CDS Mchl_3266 NC_011757.1 3445630 3445989 D KEGG: mex:Mext_3042 hypothetical protein; hypothetical protein 3445630..3445989 Methylobacterium extorquens CM4 7117605 YP_002422032.1 CDS Mchl_3267 NC_011757.1 3445979 3446458 D KEGG: mex:Mext_3043 hypothetical protein; hypothetical protein 3445979..3446458 Methylobacterium extorquens CM4 7117606 YP_002422033.1 CDS Mchl_3268 NC_011757.1 3446797 3446973 D KEGG: mex:Mext_3044 hypothetical protein; hypothetical protein 3446797..3446973 Methylobacterium extorquens CM4 7117607 YP_002422034.1 CDS flgH NC_011757.1 3447202 3447954 R part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein complement(3447202..3447954) Methylobacterium extorquens CM4 7117608 YP_002422035.1 CDS Mchl_3270 NC_011757.1 3448011 3449057 R TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: mex:Mext_3046 flagella basal body P-ring formation protein FlgA; flagella basal body P-ring formation protein FlgA complement(3448011..3449057) Methylobacterium extorquens CM4 7117609 YP_002422036.1 CDS Mchl_3271 NC_011757.1 3449072 3449863 R TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mex:Mext_3047 flagellar basal-body rod protein FlgG; flagellar basal-body rod protein FlgG complement(3449072..3449863) Methylobacterium extorquens CM4 7117610 YP_002422037.1 CDS flgF NC_011757.1 3449890 3450630 R FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar basal body rod protein FlgF complement(3449890..3450630) Methylobacterium extorquens CM4 7117611 YP_002422038.1 CDS fliL NC_011757.1 3450904 3451422 D interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 3450904..3451422 Methylobacterium extorquens CM4 7117612 YP_002422039.1 CDS fliM NC_011757.1 3451502 3452722 D with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar motor switch protein FliM 3451502..3452722 Methylobacterium extorquens CM4 7117613 YP_002422040.1 CDS Mchl_3275 NC_011757.1 3452736 3453215 D KEGG: mex:Mext_3051 hypothetical protein; hypothetical protein 3452736..3453215 Methylobacterium extorquens CM4 7117614 YP_002422041.1 CDS Mchl_3276 NC_011757.1 3453212 3454009 D KEGG: mex:Mext_3052 hypothetical protein; hypothetical protein 3453212..3454009 Methylobacterium extorquens CM4 7117615 YP_002422042.1 CDS Mchl_3277 NC_011757.1 3454013 3454507 R PFAM: glutathione peroxidase; KEGG: mex:Mext_3053 peroxiredoxin; peroxiredoxin complement(3454013..3454507) Methylobacterium extorquens CM4 7117616 YP_002422043.1 CDS Mchl_3278 NC_011757.1 3454838 3455527 D PFAM: invasion associated locus B family protein; KEGG: mex:Mext_3054 invasion associated locus B family protein; invasion associated locus B family protein 3454838..3455527 Methylobacterium extorquens CM4 7116547 YP_002422044.1 CDS Mchl_3279 NC_011757.1 3455574 3456815 D TIGRFAM: lytic murein transglycosylase; PFAM: peptidoglycan-binding protein; KEGG: mex:Mext_3055 lytic murein transglycosylase; lytic murein transglycosylase 3455574..3456815 Methylobacterium extorquens CM4 7117046 YP_002422045.1 CDS Mchl_3280 NC_011757.1 3456822 3457406 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mex:Mext_3056 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) 3456822..3457406 Methylobacterium extorquens CM4 7117047 YP_002422046.1 CDS Mchl_3281 NC_011757.1 3457446 3458330 R PFAM: elongation factor G domain protein; elongation factor G domain IV; KEGG: mex:Mext_3057 elongation factor G domain-containing protein; elongation factor G domain IV complement(3457446..3458330) Methylobacterium extorquens CM4 7117048 YP_002422047.1 CDS Mchl_3282 NC_011757.1 3458559 3458954 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mex:Mext_3058 glutathione-dependent formaldehyde-activating GFA; glutathione-dependent formaldehyde-activating protein complement(3458559..3458954) Methylobacterium extorquens CM4 7117049 YP_002422048.1 CDS Mchl_3283 NC_011757.1 3459147 3460490 R PFAM: sodium:dicarboxylate symporter; KEGG: mex:Mext_3059 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter complement(3459147..3460490) Methylobacterium extorquens CM4 7117050 YP_002422049.1 CDS Mchl_3284 NC_011757.1 3460802 3462679 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_3060 ATPase domain-containing protein; histidine kinase 3460802..3462679 Methylobacterium extorquens CM4 7117051 YP_002422050.1 CDS Mchl_3285 NC_011757.1 3462676 3464028 D PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: mex:Mext_3061 sigma-54 factor interaction domain-containing protein; Fis family transcriptional regulator 3462676..3464028 Methylobacterium extorquens CM4 7117052 YP_002422051.1 CDS Mchl_3286 NC_011757.1 3464042 3465100 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_3062 diguanylate cyclase; diguanylate cyclase complement(3464042..3465100) Methylobacterium extorquens CM4 7117053 YP_002422052.1 CDS Mchl_3287 NC_011757.1 3465355 3468366 R KEGG: mex:Mext_3063 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(3465355..3468366) Methylobacterium extorquens CM4 7117054 YP_002422053.1 CDS Mchl_3288 NC_011757.1 3468785 3470257 R TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: mex:Mext_3064 glutamyl-tRNA(Gln) amidotransferase subunit beta; glutamyl-tRNA(Gln) amidotransferase subunit beta complement(3468785..3470257) Methylobacterium extorquens CM4 7117055 YP_002422054.1 CDS Mchl_3289 NC_011757.1 3470372 3470575 R KEGG: mpo:Mpop_3263 hypothetical protein; hypothetical protein complement(3470372..3470575) Methylobacterium extorquens CM4 7117056 YP_002422055.1 CDS Mchl_3290 NC_011757.1 3470572 3471459 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mex:Mext_3065 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter complement(3470572..3471459) Methylobacterium extorquens CM4 7117057 YP_002422056.1 CDS Mchl_3291 NC_011757.1 3471533 3471796 R KEGG: mex:Mext_3066 hypothetical protein; hypothetical protein complement(3471533..3471796) Methylobacterium extorquens CM4 7117058 YP_002422057.1 CDS Mchl_3292 NC_011757.1 3471829 3472077 R KEGG: mex:Mext_3067 hypothetical protein; hypothetical protein complement(3471829..3472077) Methylobacterium extorquens CM4 7117059 YP_002422058.1 CDS Mchl_3293 NC_011757.1 3472144 3473604 R PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mex:Mext_3068 monooxygenase FAD-binding; FAD-binding monooxygenase complement(3472144..3473604) Methylobacterium extorquens CM4 7117060 YP_002422059.1 CDS queA NC_011757.1 3473697 3474803 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3473697..3474803 Methylobacterium extorquens CM4 7117061 YP_002422060.1 CDS Mchl_3295 NC_011757.1 3474800 3475642 D PFAM: DNA polymerase beta domain protein region; KEGG: mex:Mext_3070 hypothetical protein; DNA polymerase beta domain-containing protein 3474800..3475642 Methylobacterium extorquens CM4 7117062 YP_002422061.1 CDS Mchl_3296 NC_011757.1 3475639 3476790 D KEGG: mex:Mext_3071 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 3475639..3476790 Methylobacterium extorquens CM4 7117063 YP_002422062.1 CDS Mchl_3297 NC_011757.1 3476814 3477071 R KEGG: mex:Mext_3072 hypothetical protein; hypothetical protein complement(3476814..3477071) Methylobacterium extorquens CM4 7117064 YP_002422063.1 CDS Mchl_3298 NC_011757.1 3477272 3478339 R KEGG: mex:Mext_3073 hypothetical protein; hypothetical protein complement(3477272..3478339) Methylobacterium extorquens CM4 7117065 YP_002422064.1 CDS Mchl_3299 NC_011757.1 3478771 3479037 R KEGG: mpo:Mpop_1338 hypothetical protein; hypothetical protein complement(3478771..3479037) Methylobacterium extorquens CM4 7117067 YP_002422065.1 CDS Mchl_3301 NC_011757.1 3479551 3480063 R KEGG: mrd:Mrad2831_5181 transposase of insertion sequence; transposase of insertion sequence complement(3479551..3480063) Methylobacterium extorquens CM4 7117069 YP_002422066.1 CDS Mchl_3303 NC_011757.1 3481314 3481982 D KEGG: bpa:BPP2679 hypothetical protein; hypothetical protein 3481314..3481982 Methylobacterium extorquens CM4 7117071 YP_002422067.1 CDS Mchl_3304 NC_011757.1 3482023 3484080 D KEGG: xau:Xaut_0987 hypothetical protein; hypothetical protein 3482023..3484080 Methylobacterium extorquens CM4 7117072 YP_002422068.1 CDS Mchl_3305 NC_011757.1 3484080 3484970 D PFAM: OmpA/MotB domain protein; KEGG: xau:Xaut_0988 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 3484080..3484970 Methylobacterium extorquens CM4 7117073 YP_002422069.1 CDS Mchl_3306 NC_011757.1 3484967 3486283 D KEGG: xau:Xaut_0989 hypothetical protein; hypothetical protein 3484967..3486283 Methylobacterium extorquens CM4 7117074 YP_002422070.1 CDS Mchl_3307 NC_011757.1 3486283 3489384 D KEGG: lpf:lpl1068 hypothetical protein; PFAM: SNF2-related protein; helicase; SMART: DEAD-like helicases; non-specific serine/threonine protein kinase 3486283..3489384 Methylobacterium extorquens CM4 7117075 YP_002422071.1 CDS Mchl_3308 NC_011757.1 3489548 3491719 D PFAM: ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: rpb:RPB_1590 AAA_5 ATPase; ATPase AAA 3489548..3491719 Methylobacterium extorquens CM4 7117076 YP_002422072.1 CDS Mchl_3309 NC_011757.1 3491716 3492996 D PFAM: IQ calmodulin-binding- domain protein; KEGG: rpb:RPB_1591 hypothetical protein; IQ calmodulin-binding- domain-containing protein 3491716..3492996 Methylobacterium extorquens CM4 7117077 YP_002422073.1 CDS Mchl_3310 NC_011757.1 3493254 3493424 R hypothetical protein complement(3493254..3493424) Methylobacterium extorquens CM4 7117078 YP_002422074.1 CDS Mchl_3311 NC_011757.1 3493971 3494942 R hypothetical protein complement(3493971..3494942) Methylobacterium extorquens CM4 7117079 YP_002422075.1 CDS Mchl_3312 NC_011757.1 3495023 3496888 R PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: rle:pRL110096 hypothetical protein; hypothetical protein complement(3495023..3496888) Methylobacterium extorquens CM4 7117080 YP_002422076.1 CDS Mchl_3313 NC_011757.1 3496913 3498109 R KEGG: gbe:GbCGDNIH1_1519 hypothetical cytosolic protein; hypothetical protein complement(3496913..3498109) Methylobacterium extorquens CM4 7117081 YP_002422077.1 CDS Mchl_3314 NC_011757.1 3498102 3500177 R KEGG: nar:Saro_0264 hypothetical protein; hypothetical protein complement(3498102..3500177) Methylobacterium extorquens CM4 7117082 YP_002422078.1 CDS Mchl_3315 NC_011757.1 3500179 3502968 R KEGG: pap:PSPA7_5334 type II restriction enzyme, methylase subunit; type II restriction enzyme, methylase subunit complement(3500179..3502968) Methylobacterium extorquens CM4 7117083 YP_002422079.1 CDS Mchl_3316 NC_011757.1 3507164 3507472 R hypothetical protein complement(3507164..3507472) Methylobacterium extorquens CM4 7117084 YP_002422080.1 CDS Mchl_3317 NC_011757.1 3507469 3507672 R hypothetical protein complement(3507469..3507672) Methylobacterium extorquens CM4 7117085 YP_002422081.1 CDS Mchl_3318 NC_011757.1 3507740 3508117 R hypothetical protein complement(3507740..3508117) Methylobacterium extorquens CM4 7117086 YP_002422082.1 CDS Mchl_3319 NC_011757.1 3508278 3508781 R KEGG: mpo:Mpop_1362 hypothetical protein; hypothetical protein complement(3508278..3508781) Methylobacterium extorquens CM4 7117087 YP_002422083.1 CDS Mchl_3320 NC_011757.1 3508778 3509029 R KEGG: mpo:Mpop_1363 hypothetical protein; hypothetical protein complement(3508778..3509029) Methylobacterium extorquens CM4 7117088 YP_002422084.1 CDS Mchl_3321 NC_011757.1 3509026 3509271 R KEGG: mpo:Mpop_1364 hypothetical protein; hypothetical protein complement(3509026..3509271) Methylobacterium extorquens CM4 7117089 YP_002422085.1 CDS Mchl_3322 NC_011757.1 3509282 3509932 R KEGG: mpo:Mpop_1365 hypothetical protein; hypothetical protein complement(3509282..3509932) Methylobacterium extorquens CM4 7117090 YP_002422086.1 CDS Mchl_3323 NC_011757.1 3510069 3511190 D PFAM: integrase family protein; KEGG: mex:Mext_3077 integrase family protein; integrase family protein 3510069..3511190 Methylobacterium extorquens CM4 7117091 YP_002422087.1 CDS Mchl_3324 NC_011757.1 3511474 3511611 D hypothetical protein 3511474..3511611 Methylobacterium extorquens CM4 7117092 YP_002422088.1 CDS Mchl_3325 NC_011757.1 3511622 3511837 D KEGG: mex:Mext_0360 hypothetical protein; hypothetical protein 3511622..3511837 Methylobacterium extorquens CM4 7117093 YP_002422089.1 CDS Mchl_3326 NC_011757.1 3511851 3512114 D KEGG: mex:Mext_0153 hypothetical protein; hypothetical protein 3511851..3512114 Methylobacterium extorquens CM4 7117094 YP_002422090.1 CDS Mchl_3327 NC_011757.1 3512258 3512416 D hypothetical protein 3512258..3512416 Methylobacterium extorquens CM4 7117095 YP_002422091.1 CDS Mchl_3328 NC_011757.1 3512835 3513536 R hypothetical protein complement(3512835..3513536) Methylobacterium extorquens CM4 7117096 YP_002422092.1 CDS Mchl_3329 NC_011757.1 3514527 3514991 R PFAM: ROSMUCR transcriptional regulator; KEGG: mpo:Mpop_2952 MucR family transcriptional regulator; MucR family transcriptional regulator complement(3514527..3514991) Methylobacterium extorquens CM4 7117097 YP_002422093.1 CDS Mchl_3330 NC_011757.1 3515292 3515750 R hypothetical protein complement(3515292..3515750) Methylobacterium extorquens CM4 7117098 YP_002422094.1 CDS Mchl_3331 NC_011757.1 3515747 3516208 R hypothetical protein complement(3515747..3516208) Methylobacterium extorquens CM4 7117099 YP_002422095.1 CDS Mchl_3332 NC_011757.1 3516233 3516724 R KEGG: mex:Mext_0353 hypothetical protein; hypothetical protein complement(3516233..3516724) Methylobacterium extorquens CM4 7117100 YP_002422096.1 CDS Mchl_3333 NC_011757.1 3516978 3519296 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: ccr:CC_0740 sensory box/GGDEF family protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3516978..3519296 Methylobacterium extorquens CM4 7117101 YP_002422097.1 CDS Mchl_3335 NC_011757.1 3521250 3524078 D KEGG: met:M446_1053 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 3521250..3524078 Methylobacterium extorquens CM4 7117103 YP_002422098.1 CDS Mchl_3336 NC_011757.1 3524427 3527624 D KEGG: mex:Mext_0802 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 3524427..3527624 Methylobacterium extorquens CM4 7117104 YP_002422099.1 CDS Mchl_3339 NC_011757.1 3529346 3530224 D PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: mrd:Mrad2831_5229 anti-sigma-factor antagonist; anti-sigma-factor antagonist 3529346..3530224 Methylobacterium extorquens CM4 7117107 YP_002422100.1 CDS Mchl_3340 NC_011757.1 3530229 3530630 D PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: mrd:Mrad2831_5230 anti-sigma-factor antagonist; anti-sigma-factor antagonist 3530229..3530630 Methylobacterium extorquens CM4 7117108 YP_002422101.1 CDS Mchl_3341 NC_011757.1 3530611 3531015 D PFAM: ATP-binding region ATPase domain protein; KEGG: mrd:Mrad2831_5231 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor, serine/threonine protein kinase 3530611..3531015 Methylobacterium extorquens CM4 7117109 YP_002422102.1 CDS Mchl_3342 NC_011757.1 3531018 3532019 D PFAM: ATP-binding region ATPase domain protein; stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mrd:Mrad2831_5232 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor, serine/threonine protein kinase 3531018..3532019 Methylobacterium extorquens CM4 7117110 YP_002422103.1 CDS Mchl_3343 NC_011757.1 3532016 3533914 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mrd:Mrad2831_5233 histidine kinase; histidine kinase 3532016..3533914 Methylobacterium extorquens CM4 7117111 YP_002422104.1 CDS Mchl_3344 NC_011757.1 3533997 3535007 R KEGG: mex:Mext_1888 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase complement(3533997..3535007) Methylobacterium extorquens CM4 7117112 YP_002422105.1 CDS nhaA NC_011757.1 3537280 3538503 D exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 3537280..3538503 Methylobacterium extorquens CM4 7117115 YP_002422106.1 CDS Mchl_3348 NC_011757.1 3538500 3539789 D PFAM: formate C-acetyltransferase glycine radical; KEGG: mpo:Mpop_3748 hypothetical protein; formate C-acetyltransferase glycine radical 3538500..3539789 Methylobacterium extorquens CM4 7117116 YP_002422107.1 CDS Mchl_3349 NC_011757.1 3539921 3540358 D PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: scl:sce5286 methyltransferase; type 11 methyltransferase 3539921..3540358 Methylobacterium extorquens CM4 7117117 YP_002422108.1 CDS Mchl_3350 NC_011757.1 3540425 3540670 R hypothetical protein complement(3540425..3540670) Methylobacterium extorquens CM4 7117118 YP_002422109.1 CDS Mchl_3351 NC_011757.1 3540992 3542254 R PFAM: sodium/hydrogen exchanger; KEGG: mrd:Mrad2831_6040 sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(3540992..3542254) Methylobacterium extorquens CM4 7117119 YP_002422110.1 CDS Mchl_3352 NC_011757.1 3543038 3543559 D PFAM: protein of unknown function DUF421; KEGG: pla:Plav_3285 membrane protein-like protein; hypothetical protein 3543038..3543559 Methylobacterium extorquens CM4 7117120 YP_002422111.1 CDS Mchl_3355 NC_011757.1 3544214 3545488 R PFAM: sodium/hydrogen exchanger; KEGG: rru:Rru_A1350 sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(3544214..3545488) Methylobacterium extorquens CM4 7117123 YP_002422112.1 CDS Mchl_3357 NC_011757.1 3546034 3546663 R PFAM: integrase family protein; KEGG: mex:Mext_0119 integrase family protein; integrase family protein complement(3546034..3546663) Methylobacterium extorquens CM4 7117125 YP_002422113.1 CDS Mchl_3359 NC_011757.1 3547074 3548102 R PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: mlo:mlr5983 transposase; transposase IS116/IS110/IS902 family protein complement(3547074..3548102) Methylobacterium extorquens CM4 7115841 YP_002422114.1 CDS Mchl_3360 NC_011757.1 3548957 3550243 D KEGG: gbe:GbCGDNIH1_1776 hypothetical membrane associated protein; hypothetical protein 3548957..3550243 Methylobacterium extorquens CM4 7116006 YP_002422115.1 CDS Mchl_3362 NC_011757.1 3550813 3551118 R KEGG: nwi:Nwi_3091 hypothetical protein; hypothetical protein complement(3550813..3551118) Methylobacterium extorquens CM4 7116008 YP_002422116.1 CDS Mchl_3363 NC_011757.1 3551204 3551680 R TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; KEGG: mex:Mext_0113 PAS sensor protein; PAS sensor protein complement(3551204..3551680) Methylobacterium extorquens CM4 7116009 YP_002422117.1 CDS Mchl_3364 NC_011757.1 3551902 3552354 D PFAM: BLUF domain protein; KEGG: mex:Mext_0114 BLUF domain-containing protein; BLUF domain-containing protein 3551902..3552354 Methylobacterium extorquens CM4 7116010 YP_002422118.1 CDS Mchl_3366 NC_011757.1 3552751 3554493 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: met:M446_1292 integral membrane sensor hybrid histidine kinase; histidine kinase complement(3552751..3554493) Methylobacterium extorquens CM4 7116012 YP_002422119.1 CDS Mchl_3368 NC_011757.1 3556102 3557256 D PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: aav:Aave_4017 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase GroES domain-containing protein 3556102..3557256 Methylobacterium extorquens CM4 7116014 YP_002422120.1 CDS Mchl_3369 NC_011757.1 3557268 3557789 D KEGG: aav:Aave_4018 hypothetical protein; hypothetical protein 3557268..3557789 Methylobacterium extorquens CM4 7116015 YP_002422121.1 CDS Mchl_3370 NC_011757.1 3559336 3559596 D hypothetical protein 3559336..3559596 Methylobacterium extorquens CM4 7116016 YP_002422122.1 CDS Mchl_3371 NC_011757.1 3561258 3561569 R KEGG: mex:Mext_0064 hypothetical protein; hypothetical protein complement(3561258..3561569) Methylobacterium extorquens CM4 7116017 YP_002422123.1 CDS Mchl_3372 NC_011757.1 3561622 3562368 R KEGG: mex:Mext_0063 hypothetical protein; hypothetical protein complement(3561622..3562368) Methylobacterium extorquens CM4 7116018 YP_002422124.1 CDS Mchl_3373 NC_011757.1 3562398 3562652 R KEGG: mex:Mext_0062 isochorismatase hydrolase; hypothetical protein complement(3562398..3562652) Methylobacterium extorquens CM4 7116019 YP_002422125.1 CDS Mchl_3374 NC_011757.1 3564285 3565055 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: mrd:Mrad2831_2421 Crp/FNR family transcriptional regulator; Crp/Fnr family transcriptional regulator 3564285..3565055 Methylobacterium extorquens CM4 7116020 YP_002422126.1 CDS Mchl_3375 NC_011757.1 3565037 3565234 R KEGG: mex:Mext_0076 hypothetical protein; hypothetical protein complement(3565037..3565234) Methylobacterium extorquens CM4 7116021 YP_002422127.1 CDS Mchl_3376 NC_011757.1 3565273 3565983 R PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_0788 cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(3565273..3565983) Methylobacterium extorquens CM4 7116022 YP_002422128.1 CDS Mchl_3377 NC_011757.1 3566301 3566522 D KEGG: mex:Mext_0787 hypothetical protein; hypothetical protein 3566301..3566522 Methylobacterium extorquens CM4 7116023 YP_002422129.1 CDS Mchl_3378 NC_011757.1 3566644 3566859 R KEGG: mex:Mext_0785 hypothetical protein; hypothetical protein complement(3566644..3566859) Methylobacterium extorquens CM4 7116024 YP_002422130.1 CDS Mchl_3381 NC_011757.1 3568293 3569129 D PFAM: integrase catalytic region; KEGG: mex:Mext_3531 integrase catalytic region; integrase catalytic subunit 3568293..3569129 Methylobacterium extorquens CM4 7116027 YP_002422131.1 CDS Mchl_3382 NC_011757.1 3569997 3570284 R KEGG: mex:Mext_4708 hypothetical protein; hypothetical protein complement(3569997..3570284) Methylobacterium extorquens CM4 7116028 YP_002422132.1 CDS Mchl_3383 NC_011757.1 3570446 3570805 R KEGG: mpo:Mpop_3761 hypothetical protein; hypothetical protein complement(3570446..3570805) Methylobacterium extorquens CM4 7116029 YP_002422133.1 CDS Mchl_3384 NC_011757.1 3571558 3571659 R KEGG: mex:Mext_0782 hypothetical protein; hypothetical protein complement(3571558..3571659) Methylobacterium extorquens CM4 7116030 YP_002422134.1 CDS Mchl_3385 NC_011757.1 3571656 3572810 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: response regulator receiver; KEGG: mex:Mext_0783 cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator complement(3571656..3572810) Methylobacterium extorquens CM4 7116031 YP_002422135.1 CDS Mchl_3386 NC_011757.1 3573079 3573792 D PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_0075 hypothetical protein; cyclic nucleotide-binding protein 3573079..3573792 Methylobacterium extorquens CM4 7116032 YP_002422136.1 CDS Mchl_3387 NC_011757.1 3573792 3574052 D KEGG: mex:Mext_0785 hypothetical protein; hypothetical protein 3573792..3574052 Methylobacterium extorquens CM4 7116033 YP_002422137.1 CDS Mchl_3389 NC_011757.1 3574665 3575411 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mrd:Mrad2831_2433 Crp/FNR family transcriptional regulator; Crp/Fnr family transcriptional regulator complement(3574665..3575411) Methylobacterium extorquens CM4 7116035 YP_002422138.1 CDS Mchl_3390 NC_011757.1 3575989 3576348 D hypothetical protein 3575989..3576348 Methylobacterium extorquens CM4 7116036 YP_002422139.1 CDS Mchl_3391 NC_011757.1 3576603 3577322 R hypothetical protein complement(3576603..3577322) Methylobacterium extorquens CM4 7116037 YP_002422140.1 CDS Mchl_3392 NC_011757.1 3577306 3577602 R hypothetical protein complement(3577306..3577602) Methylobacterium extorquens CM4 7116038 YP_002422141.1 CDS Mchl_3393 NC_011757.1 3577599 3577940 R hypothetical protein complement(3577599..3577940) Methylobacterium extorquens CM4 7116039 YP_002422142.1 CDS Mchl_3394 NC_011757.1 3578088 3578342 R KEGG: met:M446_6723 prophage CP4-57 regulatory; hypothetical protein complement(3578088..3578342) Methylobacterium extorquens CM4 7116040 YP_002422143.1 CDS Mchl_3395 NC_011757.1 3578396 3579151 R hypothetical protein complement(3578396..3579151) Methylobacterium extorquens CM4 7116041 YP_002422144.1 CDS Mchl_3396 NC_011757.1 3579148 3580392 R PFAM: integrase family protein; KEGG: rsq:Rsph17025_0112 phage integrase family protein; integrase family protein complement(3579148..3580392) Methylobacterium extorquens CM4 7116042 YP_002422145.1 CDS Mchl_3397 NC_011757.1 3580914 3582248 D PFAM: tyrosine protein kinase; leucine-rich repeat protein; SMART: serine/threonine protein kinase; leucine-rich repeat-containing protein typical subtype; KEGG: mex:Mext_3080 serine/threonine protein kinase; serine/threonine protein kinase 3580914..3582248 Methylobacterium extorquens CM4 7116044 YP_002422146.1 CDS Mchl_3398 NC_011757.1 3582348 3583886 D PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: mex:Mext_3081 CHAD domain-containing protein; CHAD domain-containing protein 3582348..3583886 Methylobacterium extorquens CM4 7116045 YP_002422147.1 CDS Mchl_3399 NC_011757.1 3584009 3584515 D PFAM: adenylate cyclase; KEGG: mex:Mext_3082 adenylate cyclase; adenylate cyclase 3584009..3584515 Methylobacterium extorquens CM4 7116046 YP_002422148.1 CDS Mchl_3400 NC_011757.1 3584525 3585406 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mrd:Mrad2831_2093 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit complement(3584525..3585406) Methylobacterium extorquens CM4 7116047 YP_002422149.1 CDS Mchl_3401 NC_011757.1 3585396 3585860 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: bbr:BB3301 hypothetical protein; alkylhydroperoxidase-like protein complement(3585396..3585860) Methylobacterium extorquens CM4 7116048 YP_002422150.1 CDS Mchl_3402 NC_011757.1 3585894 3586328 R PFAM: cupin; KEGG: bpt:Bpet3859 Nectarin 1 precursor; cupin complement(3585894..3586328) Methylobacterium extorquens CM4 7116049 YP_002422151.1 CDS Mchl_3403 NC_011757.1 3586523 3588250 D PFAM: ferredoxin; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_3083 adenylyl cyclase class-3/4/guanylyl cyclase; adenylate/guanylate cyclase 3586523..3588250 Methylobacterium extorquens CM4 7116050 YP_002422152.1 CDS Mchl_3404 NC_011757.1 3588259 3589080 R PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3084 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(3588259..3589080) Methylobacterium extorquens CM4 7116051 YP_002422153.1 CDS Mchl_3405 NC_011757.1 3589149 3590336 R PFAM: major royal jelly protein; KEGG: mpo:Mpop_3279 hypothetical protein; hypothetical protein complement(3589149..3590336) Methylobacterium extorquens CM4 7116052 YP_002422154.1 CDS Mchl_3406 NC_011757.1 3590427 3591521 R KEGG: mex:Mext_3086 catalase; catalase complement(3590427..3591521) Methylobacterium extorquens CM4 7116053 YP_002422155.1 CDS Mchl_3407 NC_011757.1 3591723 3591965 D KEGG: mpo:Mpop_3280 hypothetical protein; hypothetical protein 3591723..3591965 Methylobacterium extorquens CM4 7116054 YP_002422156.1 CDS hppA NC_011757.1 3592045 3594177 R pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase complement(3592045..3594177) Methylobacterium extorquens CM4 7116055 YP_002422157.1 CDS Mchl_3409 NC_011757.1 3595005 3595352 R KEGG: mex:Mext_3089 hypothetical protein; hypothetical protein complement(3595005..3595352) Methylobacterium extorquens CM4 7116056 YP_002422158.1 CDS Mchl_3410 NC_011757.1 3595565 3595780 R KEGG: mex:Mext_3090 hypothetical protein; hypothetical protein complement(3595565..3595780) Methylobacterium extorquens CM4 7116057 YP_002422159.1 CDS Mchl_3411 NC_011757.1 3595998 3597218 R PFAM: aminotransferase class I and II; KEGG: mex:Mext_3091 aminotransferase; aminotransferase complement(3595998..3597218) Methylobacterium extorquens CM4 7116058 YP_002422160.1 CDS Mchl_3412 NC_011757.1 3597364 3597729 R KEGG: mex:Mext_3092 hypothetical protein; hypothetical protein complement(3597364..3597729) Methylobacterium extorquens CM4 7116059 YP_002422161.1 CDS Mchl_3413 NC_011757.1 3597857 3599674 D TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; poly-beta-hydroxybutyrate polymerase domain protein; KEGG: mex:Mext_3093 poly(R)-hydroxyalkanoic acid synthase, class I; poly(R)-hydroxyalkanoic acid synthase, class I 3597857..3599674 Methylobacterium extorquens CM4 7116060 YP_002422162.1 CDS Mchl_3414 NC_011757.1 3599800 3601617 D PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mex:Mext_3094 sodium/hydrogen exchanger; sodium/hydrogen exchanger 3599800..3601617 Methylobacterium extorquens CM4 7116061 YP_002422163.1 CDS Mchl_3415 NC_011757.1 3601630 3602814 R PFAM: regulatory protein LuxR; KEGG: mex:Mext_3095 regulatory protein LuxR; LuxR family transcriptional regulator complement(3601630..3602814) Methylobacterium extorquens CM4 7116062 YP_002422164.1 CDS Mchl_3416 NC_011757.1 3603070 3605160 R KEGG: mex:Mext_3096 glycyl-tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase subunit beta; glycyl-tRNA synthetase subunit beta complement(3603070..3605160) Methylobacterium extorquens CM4 7116063 YP_002422165.1 CDS Mchl_3417 NC_011757.1 3605316 3607202 R PFAM: protein of unknown function DUF839; KEGG: mex:Mext_3097 hypothetical protein; hypothetical protein complement(3605316..3607202) Methylobacterium extorquens CM4 7116064 YP_002422166.1 CDS Mchl_3418 NC_011757.1 3607397 3607840 R KEGG: mex:Mext_3098 hypothetical protein; hypothetical protein complement(3607397..3607840) Methylobacterium extorquens CM4 7116065 YP_002422167.1 CDS glyQ NC_011757.1 3607842 3608780 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(3607842..3608780) Methylobacterium extorquens CM4 7116066 YP_002422168.1 CDS Mchl_3420 NC_011757.1 3608877 3609035 R KEGG: mex:Mext_3100 hypothetical protein; hypothetical protein complement(3608877..3609035) Methylobacterium extorquens CM4 7116067 YP_002422169.1 CDS Mchl_3421 NC_011757.1 3609286 3609528 D KEGG: mex:Mext_3101 hypothetical protein; hypothetical protein 3609286..3609528 Methylobacterium extorquens CM4 7116068 YP_002422170.1 CDS Mchl_3422 NC_011757.1 3609541 3610104 R PFAM: regulatory protein TetR; KEGG: mex:Mext_3102 regulatory protein TetR; TetR family transcriptional regulator complement(3609541..3610104) Methylobacterium extorquens CM4 7116069 YP_002422171.1 CDS Mchl_3423 NC_011757.1 3610108 3610572 R PFAM: protein of unknown function DUF1348; KEGG: mex:Mext_3103 hypothetical protein; hypothetical protein complement(3610108..3610572) Methylobacterium extorquens CM4 7116070 YP_002422172.1 CDS Mchl_3424 NC_011757.1 3610716 3611576 R PFAM: peptidase S49; KEGG: mex:Mext_3105 peptidase S49; peptidase S49 complement(3610716..3611576) Methylobacterium extorquens CM4 7116071 YP_002422173.1 CDS Mchl_3425 NC_011757.1 3611801 3612553 R PFAM: methyltransferase small; methyltransferase type 12; KEGG: mex:Mext_3106 methyltransferase small; methyltransferase small complement(3611801..3612553) Methylobacterium extorquens CM4 7116072 YP_002422174.1 CDS Mchl_3426 NC_011757.1 3612565 3612792 R KEGG: mex:Mext_3107 hypothetical protein; hypothetical protein complement(3612565..3612792) Methylobacterium extorquens CM4 7116073 YP_002422175.1 CDS Mchl_3427 NC_011757.1 3612987 3614009 D PFAM: polyprenyl synthetase; KEGG: mex:Mext_3108 polyprenyl synthetase; polyprenyl synthetase 3612987..3614009 Methylobacterium extorquens CM4 7116074 YP_002422176.1 CDS Mchl_3428 NC_011757.1 3614031 3614906 R An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(3614031..3614906) Methylobacterium extorquens CM4 7116075 YP_002422177.1 CDS Mchl_3429 NC_011757.1 3615040 3616683 R PFAM: porin; KEGG: mex:Mext_3110 porin; porin complement(3615040..3616683) Methylobacterium extorquens CM4 7116076 YP_002422178.1 CDS Mchl_3430 NC_011757.1 3617624 3619525 R PFAM: hypotheticalprotein; Tetratricopeptide TPR_2 repeat protein; SMART: hypothetical protein; KEGG: mex:Mext_3111 hypotheticalprotein; hypothetical protein complement(3617624..3619525) Methylobacterium extorquens CM4 7116077 YP_002422179.1 CDS Mchl_3431 NC_011757.1 3619652 3619957 R KEGG: mex:Mext_3112 hypothetical protein; hypothetical protein complement(3619652..3619957) Methylobacterium extorquens CM4 7116078 YP_002422180.1 CDS Mchl_3432 NC_011757.1 3620029 3620241 R KEGG: mex:Mext_3113 hypothetical protein; hypothetical protein complement(3620029..3620241) Methylobacterium extorquens CM4 7116079 YP_002422181.1 CDS Mchl_3433 NC_011757.1 3620648 3620887 D KEGG: mex:Mext_3114 hypothetical protein; hypothetical protein 3620648..3620887 Methylobacterium extorquens CM4 7116080 YP_002422182.1 CDS Mchl_3434 NC_011757.1 3621034 3621357 D KEGG: mex:Mext_3115 hypothetical protein; hypothetical protein 3621034..3621357 Methylobacterium extorquens CM4 7116081 YP_002422183.1 CDS Mchl_3435 NC_011757.1 3621408 3622742 R KEGG: mex:Mext_3116 Nrd protein; Nrd protein complement(3621408..3622742) Methylobacterium extorquens CM4 7116082 YP_002422184.1 CDS Mchl_3436 NC_011757.1 3622908 3623876 D PFAM: band 7 protein; KEGG: mex:Mext_3117 band 7 protein; band 7 protein 3622908..3623876 Methylobacterium extorquens CM4 7116083 YP_002422185.1 CDS Mchl_3437 NC_011757.1 3624087 3625757 D KEGG: mex:Mext_3118 cyclic peptide transporter; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter; SMART: ATPase AAA; cyclic peptide transporter 3624087..3625757 Methylobacterium extorquens CM4 7116084 YP_002422186.1 CDS Mchl_3438 NC_011757.1 3625863 3626138 D KEGG: mpo:Mpop_3314 hypothetical protein; hypothetical protein 3625863..3626138 Methylobacterium extorquens CM4 7116085 YP_002422187.1 CDS Mchl_3439 NC_011757.1 3626135 3626536 D PFAM: PilT protein domain protein; KEGG: mpo:Mpop_3315 PilT protein domain protein; PilT protein domain-containing protein 3626135..3626536 Methylobacterium extorquens CM4 7116086 YP_002422188.1 CDS Mchl_3440 NC_011757.1 3626604 3628661 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(3626604..3628661) Methylobacterium extorquens CM4 7114196 YP_002422189.1 CDS Mchl_3441 NC_011757.1 3629015 3629206 D KEGG: mex:Mext_3120 hypothetical protein; hypothetical protein 3629015..3629206 Methylobacterium extorquens CM4 7114198 YP_002422190.1 CDS Mchl_3442 NC_011757.1 3629230 3630270 R PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mex:Mext_3121 threonine aldolase; threonine aldolase complement(3629230..3630270) Methylobacterium extorquens CM4 7114199 YP_002422191.1 CDS Mchl_3443 NC_011757.1 3630412 3632178 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3122 ABC transporter; ABC transporter complement(3630412..3632178) Methylobacterium extorquens CM4 7114200 YP_002422192.1 CDS Mchl_3444 NC_011757.1 3632384 3633739 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3123 major facilitator transporter; major facilitator superfamily protein complement(3632384..3633739) Methylobacterium extorquens CM4 7114201 YP_002422193.1 CDS Mchl_3445 NC_011757.1 3633736 3634548 R PFAM: PRC-barrel domain protein; KEGG: mex:Mext_3124 PRC-barrel domain-containing protein; PRC-barrel domain-containing protein complement(3633736..3634548) Methylobacterium extorquens CM4 7114202 YP_002422194.1 CDS Mchl_3446 NC_011757.1 3634762 3635136 D KEGG: mex:Mext_3125 hypothetical protein; hypothetical protein 3634762..3635136 Methylobacterium extorquens CM4 7114203 YP_002422195.1 CDS Mchl_3447 NC_011757.1 3635174 3635614 R PFAM: PRC-barrel domain protein; KEGG: mex:Mext_3126 PRC-barrel domain-containing protein; PRC-barrel domain-containing protein complement(3635174..3635614) Methylobacterium extorquens CM4 7114204 YP_002422196.1 CDS Mchl_3448 NC_011757.1 3635934 3636266 D PFAM: SWIB/MDM2 domain protein; KEGG: mex:Mext_3127 SWIB/MDM2 domain-containing protein; SWIB/MDM2 domain-containing protein 3635934..3636266 Methylobacterium extorquens CM4 7114205 YP_002422197.1 CDS Mchl_3449 NC_011757.1 3636356 3637147 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3128 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3636356..3637147) Methylobacterium extorquens CM4 7114206 YP_002422198.1 CDS Mchl_3450 NC_011757.1 3637230 3638609 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3129 major facilitator transporter; major facilitator superfamily protein complement(3637230..3638609) Methylobacterium extorquens CM4 7114207 YP_002422199.1 CDS Mchl_3451 NC_011757.1 3638838 3639860 D PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3130 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3638838..3639860 Methylobacterium extorquens CM4 7114208 YP_002422200.1 CDS Mchl_3452 NC_011757.1 3639942 3640808 D PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mex:Mext_3131 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase 3639942..3640808 Methylobacterium extorquens CM4 7114209 YP_002422201.1 CDS Mchl_3453 NC_011757.1 3640812 3641519 R PFAM: glutathione S-transferase domain; KEGG: mex:Mext_3132 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein complement(3640812..3641519) Methylobacterium extorquens CM4 7114210 YP_002422202.1 CDS Mchl_3454 NC_011757.1 3641793 3642008 D KEGG: mpo:Mpop_3330 hypothetical protein; hypothetical protein 3641793..3642008 Methylobacterium extorquens CM4 7114211 YP_002422203.1 CDS Mchl_3455 NC_011757.1 3642165 3642476 D PFAM: ETC complex I subunit conserved region; KEGG: mex:Mext_3134 ETC complex I subunit region; ETC complex I subunit conserved region 3642165..3642476 Methylobacterium extorquens CM4 7114213 YP_002422204.1 CDS Mchl_3456 NC_011757.1 3642542 3643003 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mex:Mext_3135 CMP/dCMP deaminase zinc-binding; zinc-binding CMP/dCMP deaminase complement(3642542..3643003) Methylobacterium extorquens CM4 7114214 YP_002422205.1 CDS Mchl_3457 NC_011757.1 3643018 3644082 R KEGG: mex:Mext_3136 radical SAM domain-containing protein; radical SAM domain-containing protein complement(3643018..3644082) Methylobacterium extorquens CM4 7114215 YP_002422206.1 CDS Mchl_3458 NC_011757.1 3644142 3644933 R KEGG: mex:Mext_3137 hypothetical protein; hypothetical protein complement(3644142..3644933) Methylobacterium extorquens CM4 7114216 YP_002422207.1 CDS Mchl_3459 NC_011757.1 3645160 3647436 D KEGG: mex:Mext_3138 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX 3645160..3647436 Methylobacterium extorquens CM4 7114217 YP_002422208.1 CDS Mchl_3460 NC_011757.1 3647436 3647612 D hypothetical protein 3647436..3647612 Methylobacterium extorquens CM4 7114218 YP_002422209.1 CDS Mchl_3461 NC_011757.1 3647609 3649210 D KEGG: mex:Mext_3139 histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; histidine kinase 3647609..3649210 Methylobacterium extorquens CM4 7114219 YP_002422210.1 CDS Mchl_3462 NC_011757.1 3649237 3649554 D KEGG: mex:Mext_3140 hypothetical protein; hypothetical protein 3649237..3649554 Methylobacterium extorquens CM4 7114220 YP_002422211.1 CDS Mchl_3463 NC_011757.1 3649608 3650822 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(3649608..3650822) Methylobacterium extorquens CM4 7114221 YP_002422212.1 CDS Mchl_3464 NC_011757.1 3650967 3651479 R KEGG: mex:Mext_3142 hypothetical protein; hypothetical protein complement(3650967..3651479) Methylobacterium extorquens CM4 7114222 YP_002422213.1 CDS Mchl_3465 NC_011757.1 3651662 3652210 D PFAM: formaldehyde-activating enzyme (Fae); KEGG: mex:Mext_3143 formaldehyde-activating protein; formaldehyde-activating enzyme (Fae) 3651662..3652210 Methylobacterium extorquens CM4 7114223 YP_002422214.1 CDS Mchl_3466 NC_011757.1 3652317 3652577 D TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: mlo:mlr9262 hypothetical protein; CopG/Arc/MetJ family addiction module antidote protein 3652317..3652577 Methylobacterium extorquens CM4 7114224 YP_002422215.1 CDS Mchl_3467 NC_011757.1 3652574 3652870 D PFAM: plasmid stabilization system; KEGG: smd:Smed_6483 addiction module toxin, RelE/StbE family; plasmid stabilization system 3652574..3652870 Methylobacterium extorquens CM4 7114225 YP_002422216.1 CDS Mchl_3468 NC_011757.1 3652902 3653639 D TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mex:Mext_3144 RNA methyltransferase; TrmH family RNA methyltransferase 3652902..3653639 Methylobacterium extorquens CM4 7114226 YP_002422217.1 CDS Mchl_3469 NC_011757.1 3653643 3653984 R KEGG: mpo:Mpop_3342 hypothetical protein; hypothetical protein complement(3653643..3653984) Methylobacterium extorquens CM4 7114227 YP_002422218.1 CDS Mchl_3470 NC_011757.1 3654014 3655027 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_3146 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein complement(3654014..3655027) Methylobacterium extorquens CM4 7114228 YP_002422219.1 CDS Mchl_3471 NC_011757.1 3655160 3656845 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_3147 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3655160..3656845) Methylobacterium extorquens CM4 7114229 YP_002422220.1 CDS Mchl_3472 NC_011757.1 3657355 3657903 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_3148 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(3657355..3657903) Methylobacterium extorquens CM4 7114230 YP_002422221.1 CDS Mchl_3473 NC_011757.1 3657911 3659218 R KEGG: mex:Mext_3149 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase complement(3657911..3659218) Methylobacterium extorquens CM4 7114231 YP_002422222.1 CDS Mchl_3474 NC_011757.1 3659362 3659748 R PFAM: response regulator receiver; KEGG: mex:Mext_3150 response regulator receiver; response regulator receiver protein complement(3659362..3659748) Methylobacterium extorquens CM4 7114232 YP_002422223.1 CDS Mchl_3475 NC_011757.1 3659862 3661259 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mex:Mext_3151 hypothetical protein; hypothetical protein complement(3659862..3661259) Methylobacterium extorquens CM4 7114233 YP_002422224.1 CDS Mchl_3476 NC_011757.1 3661414 3661782 R KEGG: mex:Mext_3152 hypothetical protein; hypothetical protein complement(3661414..3661782) Methylobacterium extorquens CM4 7114234 YP_002422225.1 CDS Mchl_3477 NC_011757.1 3661990 3662940 D PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: mex:Mext_3153 alpha/beta hydrolase domain-containing protein; alpha/beta hydrolase fold-3 domain-containing protein 3661990..3662940 Methylobacterium extorquens CM4 7114235 YP_002422226.1 CDS Mchl_3478 NC_011757.1 3662980 3665490 D PFAM: helicase; DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase; SMART: DEAD-like helicases; KEGG: mex:Mext_3154 DEAD/DEAH box helicase domain-containing protein; DEAD/DEAH box helicase 3662980..3665490 Methylobacterium extorquens CM4 7114236 YP_002422227.1 CDS Mchl_3479 NC_011757.1 3665532 3666245 D KEGG: mex:Mext_3155 ICC-like phosphoesterase; ICC-like phosphoesterase 3665532..3666245 Methylobacterium extorquens CM4 7114237 YP_002422228.1 CDS Mchl_3480 NC_011757.1 3666359 3666796 R KEGG: mex:Mext_3156 hypothetical protein; hypothetical protein complement(3666359..3666796) Methylobacterium extorquens CM4 7114238 YP_002422229.1 CDS Mchl_3481 NC_011757.1 3667097 3668422 D PFAM: chloride channel core; KEGG: mex:Mext_3157 chloride channel core; chloride channel core 3667097..3668422 Methylobacterium extorquens CM4 7114239 YP_002422230.1 CDS Mchl_3482 NC_011757.1 3668496 3668675 D PFAM: protein of unknown function DUF1328; KEGG: mex:Mext_3158 hypothetical protein; hypothetical protein 3668496..3668675 Methylobacterium extorquens CM4 7114240 YP_002422231.1 CDS Mchl_3483 NC_011757.1 3668691 3669536 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3159 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3668691..3669536 Methylobacterium extorquens CM4 7114241 YP_002422232.1 CDS Mchl_3484 NC_011757.1 3669706 3670683 R KEGG: mex:Mext_3160 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; thiamine-monophosphate kinase complement(3669706..3670683) Methylobacterium extorquens CM4 7114242 YP_002422233.1 CDS Mchl_3485 NC_011757.1 3670689 3671204 R TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: mex:Mext_3161 transcription antitermination factor NusB; NusB antitermination factor complement(3670689..3671204) Methylobacterium extorquens CM4 7114243 YP_002422234.1 CDS Mchl_3486 NC_011757.1 3671201 3671722 R KEGG: mex:Mext_3162 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase complement(3671201..3671722) Methylobacterium extorquens CM4 7114244 YP_002422235.1 CDS Mchl_3487 NC_011757.1 3672035 3673561 D PFAM: UbiA prenyltransferase; KEGG: mex:Mext_3163 hypothetical protein; hypothetical protein 3672035..3673561 Methylobacterium extorquens CM4 7114245 YP_002422236.1 CDS Mchl_3488 NC_011757.1 3673561 3673986 D PFAM: GtrA family protein; KEGG: mex:Mext_3164 GtrA family protein; GtrA family protein 3673561..3673986 Methylobacterium extorquens CM4 7114246 YP_002422237.1 CDS Mchl_3489 NC_011757.1 3673974 3675194 R KEGG: mex:Mext_3165 hypothetical protein; hypothetical protein complement(3673974..3675194) Methylobacterium extorquens CM4 7114247 YP_002422238.1 CDS Mchl_3490 NC_011757.1 3675489 3676010 D KEGG: mex:Mext_3166 hypothetical protein; hypothetical protein 3675489..3676010 Methylobacterium extorquens CM4 7114248 YP_002422239.1 CDS Mchl_3491 NC_011757.1 3676024 3676662 R TIGRFAM: riboflavin synthase, subunit alpha; PFAM: Lumazine-binding protein; KEGG: mex:Mext_3167 riboflavin synthase, alpha subunit; riboflavin synthase subunit alpha complement(3676024..3676662) Methylobacterium extorquens CM4 7114249 YP_002422240.1 CDS Mchl_3492 NC_011757.1 3676664 3677794 R TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: mex:Mext_3168 riboflavin biosynthesis protein RibD; riboflavin biosynthesis protein RibD complement(3676664..3677794) Methylobacterium extorquens CM4 7114250 YP_002422241.1 CDS nrdR NC_011757.1 3677791 3678348 R PFAM: ATP-cone domain protein; KEGG: mex:Mext_3169 ATP-cone domain-containing protein; NrdR family transcriptional regulator complement(3677791..3678348) Methylobacterium extorquens CM4 7114251 YP_002422242.1 CDS Mchl_3494 NC_011757.1 3678430 3678981 R TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mpo:Mpop_3365 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator complement(3678430..3678981) Methylobacterium extorquens CM4 7114252 YP_002422243.1 CDS glyA NC_011757.1 3679135 3680439 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(3679135..3680439) Methylobacterium extorquens CM4 7114253 YP_002422244.1 CDS Mchl_3496 NC_011757.1 3680806 3681294 R PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: mex:Mext_3172 H+transporting two-sector ATPase B/B' subunit; H+transporting two-sector ATPase B/B' subunit complement(3680806..3681294) Methylobacterium extorquens CM4 7114254 YP_002422245.1 CDS Mchl_3497 NC_011757.1 3681382 3681987 R PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: mex:Mext_3173 H+transporting two-sector ATPase B/B' subunit; H+transporting two-sector ATPase B/B' subunit complement(3681382..3681987) Methylobacterium extorquens CM4 7114255 YP_002422246.1 CDS Mchl_3498 NC_011757.1 3682185 3682412 R PFAM: H+transporting two-sector ATPase C subunit; KEGG: mex:Mext_3174 H+transporting two-sector ATPase C subunit; H+transporting two-sector ATPase C subunit complement(3682185..3682412) Methylobacterium extorquens CM4 7114256 YP_002422247.1 CDS Mchl_3499 NC_011757.1 3682473 3683228 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(3682473..3683228) Methylobacterium extorquens CM4 7114257 YP_002422248.1 CDS Mchl_3500 NC_011757.1 3683349 3683717 R KEGG: mex:Mext_3176 hypothetical protein; hypothetical protein complement(3683349..3683717) Methylobacterium extorquens CM4 7114258 YP_002422249.1 CDS Mchl_3501 NC_011757.1 3683881 3684534 R KEGG: mex:Mext_3177 DsbA oxidoreductase; DsbA oxidoreductase complement(3683881..3684534) Methylobacterium extorquens CM4 7114259 YP_002422250.1 CDS Mchl_3502 NC_011757.1 3684809 3685285 R PFAM: protein of unknown function DUF721; KEGG: mex:Mext_3178 hypothetical protein; hypothetical protein complement(3684809..3685285) Methylobacterium extorquens CM4 7114260 YP_002422251.1 CDS Mchl_3503 NC_011757.1 3685418 3685741 R KEGG: mex:Mext_3179 hypothetical protein; hypothetical protein complement(3685418..3685741) Methylobacterium extorquens CM4 7114261 YP_002422252.1 CDS Mchl_3504 NC_011757.1 3685777 3687102 D TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; A/G-specific adenine glycosylase MutY; KEGG: mex:Mext_3180 A/G-specific adenine glycosylase; A/G-specific adenine glycosylase 3685777..3687102 Methylobacterium extorquens CM4 7114262 YP_002422253.1 CDS Mchl_3505 NC_011757.1 3687166 3688362 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mex:Mext_3181 DNA methylase N-4/N-6 domain-containing protein; DNA methylase N-4/N-6 domain-containing protein complement(3687166..3688362) Methylobacterium extorquens CM4 7114263 YP_002422254.1 CDS Mchl_3506 NC_011757.1 3688792 3689139 D TIGRFAM: lipoprotein A; PFAM: Rare lipoprotein A; KEGG: mex:Mext_3182 lipoprotein A; lipoprotein A 3688792..3689139 Methylobacterium extorquens CM4 7114264 YP_002422255.1 CDS Mchl_3507 NC_011757.1 3689267 3689584 D KEGG: mex:Mext_3183 hypothetical protein; hypothetical protein 3689267..3689584 Methylobacterium extorquens CM4 7114265 YP_002422256.1 CDS Mchl_3508 NC_011757.1 3689692 3689913 D KEGG: mex:Mext_3184 hypothetical protein; hypothetical protein 3689692..3689913 Methylobacterium extorquens CM4 7114266 YP_002422257.1 CDS Mchl_3509 NC_011757.1 3690087 3691910 D PFAM: SMC domain protein; ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3185 ABC transporter; ABC transporter 3690087..3691910 Methylobacterium extorquens CM4 7114267 YP_002422258.1 CDS Mchl_3510 NC_011757.1 3692237 3693898 D PFAM: porin; KEGG: mex:Mext_3186 porin; porin 3692237..3693898 Methylobacterium extorquens CM4 7114268 YP_002422259.1 CDS Mchl_3511 NC_011757.1 3694115 3696121 D KEGG: mex:Mext_3187 hypothetical protein; hypothetical protein 3694115..3696121 Methylobacterium extorquens CM4 7114269 YP_002422260.1 CDS Mchl_3512 NC_011757.1 3696164 3697399 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_3188 adenylyl cyclase class-3/4/guanylyl cyclase; adenylate/guanylate cyclase complement(3696164..3697399) Methylobacterium extorquens CM4 7114270 YP_002422261.1 CDS Mchl_3513 NC_011757.1 3697540 3698145 D PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: mex:Mext_3189 metal-dependent phosphohydrolase; metal dependent phosphohydrolase 3697540..3698145 Methylobacterium extorquens CM4 7114271 YP_002422262.1 CDS Mchl_3514 NC_011757.1 3698169 3700493 R PFAM: lytic transglycosylase catalytic; KEGG: mex:Mext_3190 lytic transglycosylase catalytic; lytic transglycosylase complement(3698169..3700493) Methylobacterium extorquens CM4 7114272 YP_002422263.1 CDS Mchl_3515 NC_011757.1 3700693 3701583 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 3700693..3701583 Methylobacterium extorquens CM4 7114273 YP_002422264.1 CDS smpB NC_011757.1 3701686 3702159 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 3701686..3702159 Methylobacterium extorquens CM4 7114274 YP_002422265.1 CDS Mchl_3517 NC_011757.1 3702381 3703037 R PFAM: protein of unknown function DUF88; KEGG: mex:Mext_3193 hypothetical protein; hypothetical protein complement(3702381..3703037) Methylobacterium extorquens CM4 7114275 YP_002422266.1 CDS Mchl_3518 NC_011757.1 3703538 3704128 R TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: mex:Mext_3194 orotate phosphoribosyltransferase; orotate phosphoribosyltransferase complement(3703538..3704128) Methylobacterium extorquens CM4 7114276 YP_002422267.1 CDS Mchl_3519 NC_011757.1 3704343 3704690 R KEGG: mex:Mext_3195 hypothetical protein; hypothetical protein complement(3704343..3704690) Methylobacterium extorquens CM4 7114277 YP_002422268.1 CDS Mchl_3520 NC_011757.1 3704805 3707036 R KEGG: mex:Mext_3196 RelA/SpoT family protein; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA complement(3704805..3707036) Methylobacterium extorquens CM4 7114278 YP_002422269.1 CDS Mchl_3521 NC_011757.1 3707407 3707817 R Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and subunit alphas; DNA-directed RNA polymerase subunit omega complement(3707407..3707817) Methylobacterium extorquens CM4 7113653 YP_002422270.1 CDS Mchl_3522 NC_011757.1 3708021 3708587 D PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: mex:Mext_3198 scaffold protein Nfu/NifU; Scaffold protein Nfu/NifU 3708021..3708587 Methylobacterium extorquens CM4 7113655 YP_002422271.1 CDS Mchl_3523 NC_011757.1 3708745 3709425 D PFAM: peptidase M22 glycoprotease; KEGG: mex:Mext_3199 peptidase M22 glycoprotease; peptidase M22 glycoprotease 3708745..3709425 Methylobacterium extorquens CM4 7113656 YP_002422272.1 CDS Mchl_3524 NC_011757.1 3709422 3709943 D PFAM: GCN5-related N-acetyltransferase; KEGG: mpo:Mpop_3396 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 3709422..3709943 Methylobacterium extorquens CM4 7113657 YP_002422273.1 CDS Mchl_3525 NC_011757.1 3709969 3710847 D PFAM: phospholipid/glycerol acyltransferase; KEGG: mex:Mext_3201 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 3709969..3710847 Methylobacterium extorquens CM4 7113658 YP_002422274.1 CDS Mchl_3526 NC_011757.1 3710852 3711295 R PFAM: MEKHLA domain protein; KEGG: mex:Mext_3202 MEKHLA domain-containing protein; MEKHLA domain-containing protein complement(3710852..3711295) Methylobacterium extorquens CM4 7113659 YP_002422275.1 CDS Mchl_3527 NC_011757.1 3711394 3711942 D PFAM: membrane-flanked domain; KEGG: mex:Mext_3203 hypothetical protein; membrane-flanked domain 3711394..3711942 Methylobacterium extorquens CM4 7113660 YP_002422276.1 CDS Mchl_3528 NC_011757.1 3712011 3713399 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 3712011..3713399 Methylobacterium extorquens CM4 7113661 YP_002422277.1 CDS Mchl_3529 NC_011757.1 3713436 3714542 D PFAM: PhoH family protein; KEGG: mex:Mext_3205 PhoH family protein; PhoH family protein 3713436..3714542 Methylobacterium extorquens CM4 7113662 YP_002422278.1 CDS Mchl_3530 NC_011757.1 3714613 3715098 D PFAM: protein of unknown function UPF0054; KEGG: mex:Mext_3206 hypothetical protein; hypothetical protein 3714613..3715098 Methylobacterium extorquens CM4 7113663 YP_002422279.1 CDS Mchl_3531 NC_011757.1 3715135 3716283 D PFAM: CBS domain containing protein; transporter-associated region; KEGG: mex:Mext_3207 CBS domain-containing protein; CBS domain-containing protein 3715135..3716283 Methylobacterium extorquens CM4 7113664 YP_002422280.1 CDS lnt NC_011757.1 3716312 3718015 D transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 3716312..3718015 Methylobacterium extorquens CM4 7113665 YP_002422281.1 CDS Mchl_3533 NC_011757.1 3718162 3718971 D PFAM: BA14K family protein; KEGG: mex:Mext_3209 hypothetical protein; BA14K family protein 3718162..3718971 Methylobacterium extorquens CM4 7113666 YP_002422282.1 CDS Mchl_3534 NC_011757.1 3719082 3720674 R PFAM: catalase; KEGG: mex:Mext_3210 catalase; catalase complement(3719082..3720674) Methylobacterium extorquens CM4 7113667 YP_002422283.1 CDS Mchl_3535 NC_011757.1 3720822 3721793 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3211 LysR substrate-binding; LysR family transcriptional regulator 3720822..3721793 Methylobacterium extorquens CM4 7113668 YP_002422284.1 CDS Mchl_3536 NC_011757.1 3721947 3723002 D TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase; KEGG: mex:Mext_3212 membrane protein AbrB duplication; membrane protein 3721947..3723002 Methylobacterium extorquens CM4 7113669 YP_002422285.1 CDS Mchl_3537 NC_011757.1 3722999 3723343 D PFAM: diacylglycerol kinase; KEGG: mex:Mext_3213 diacylglycerol kinase; diacylglycerol kinase 3722999..3723343 Methylobacterium extorquens CM4 7113670 YP_002422286.1 CDS Mchl_3538 NC_011757.1 3723366 3723563 R KEGG: mex:Mext_3214 hypothetical protein; hypothetical protein complement(3723366..3723563) Methylobacterium extorquens CM4 7113671 YP_002422287.1 CDS Mchl_3539 NC_011757.1 3723560 3723760 R KEGG: mex:Mext_3215 hypothetical protein; hypothetical protein complement(3723560..3723760) Methylobacterium extorquens CM4 7113672 YP_002422288.1 CDS Mchl_3540 NC_011757.1 3724035 3724592 D PFAM: metallophosphoesterase; KEGG: mex:Mext_3216 metallophosphoesterase; metallophosphoesterase 3724035..3724592 Methylobacterium extorquens CM4 7113673 YP_002422289.1 CDS Mchl_3541 NC_011757.1 3724602 3725462 R KEGG: mex:Mext_3217 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase complement(3724602..3725462) Methylobacterium extorquens CM4 7113674 YP_002422290.1 CDS Mchl_3542 NC_011757.1 3725688 3726950 D PFAM: protein of unknown function DUF323; KEGG: mex:Mext_3218 hypothetical protein; hypothetical protein 3725688..3726950 Methylobacterium extorquens CM4 7113675 YP_002422291.1 CDS Mchl_3543 NC_011757.1 3727008 3727985 D TIGRFAM: methyltransferase; KEGG: mex:Mext_3219 hypothetical protein; methyltransferase 3727008..3727985 Methylobacterium extorquens CM4 7113676 YP_002422292.1 CDS Mchl_3544 NC_011757.1 3728260 3730401 D KEGG: mex:Mext_3220 hypothetical protein; hypothetical protein 3728260..3730401 Methylobacterium extorquens CM4 7113677 YP_002422293.1 CDS Mchl_3545 NC_011757.1 3730451 3730891 R PFAM: protein of unknown function DUF779; KEGG: mex:Mext_3221 hypothetical protein; hypothetical protein complement(3730451..3730891) Methylobacterium extorquens CM4 7113678 YP_002422294.1 CDS Mchl_3546 NC_011757.1 3731114 3733801 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mex:Mext_3222 nitrate reductase; nitrate reductase 3731114..3733801 Methylobacterium extorquens CM4 7113679 YP_002422295.1 CDS Mchl_3547 NC_011757.1 3733917 3735374 D TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_3223 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 3733917..3735374 Methylobacterium extorquens CM4 7113680 YP_002422296.1 CDS Mchl_3548 NC_011757.1 3735660 3736262 D PFAM: electron transporter SCO1/SenC; KEGG: mex:Mext_3224 electron transporter SCO1/SenC; electron transporter SCO1/SenC 3735660..3736262 Methylobacterium extorquens CM4 7113681 YP_002422297.1 CDS Mchl_3549 NC_011757.1 3736213 3738057 R KEGG: mex:Mext_3225 glycosyl transferase; glycosyl transferase complement(3736213..3738057) Methylobacterium extorquens CM4 7113682 YP_002422298.1 CDS Mchl_3550 NC_011757.1 3738178 3739101 D PFAM: extracellular solute-binding protein family 3; KEGG: mex:Mext_3226 extracellular solute-binding protein; family 3 extracellular solute-binding protein 3738178..3739101 Methylobacterium extorquens CM4 7113683 YP_002422299.1 CDS Mchl_3551 NC_011757.1 3739197 3739403 D KEGG: mex:Mext_3227 hypothetical protein; hypothetical protein 3739197..3739403 Methylobacterium extorquens CM4 7113684 YP_002422300.1 CDS Mchl_3552 NC_011757.1 3739427 3739837 R KEGG: mex:Mext_3228 hypothetical protein; hypothetical protein complement(3739427..3739837) Methylobacterium extorquens CM4 7113685 YP_002422301.1 CDS Mchl_3553 NC_011757.1 3739931 3741838 R KEGG: mex:Mext_3229 cobalt chelatase, pCobT subunit; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit; SMART: von Willebrand factor type A; cobalt chelatase, pCobT subunit complement(3739931..3741838) Methylobacterium extorquens CM4 7113686 YP_002422302.1 CDS Mchl_3554 NC_011757.1 3741959 3742942 R KEGG: mex:Mext_3230 cobalt chelatase, pCobS small subunit; TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities AAA_5; cobalt chelatase, pCobS small subunit complement(3741959..3742942) Methylobacterium extorquens CM4 7113687 YP_002422303.1 CDS Mchl_3555 NC_011757.1 3743282 3743989 R PFAM: heat shock protein DnaJ domain protein; KEGG: mex:Mext_3231 heat shock protein DnaJ domain-containing protein; heat shock protein DnaJ domain-containing protein complement(3743282..3743989) Methylobacterium extorquens CM4 7113688 YP_002422304.1 CDS Mchl_3556 NC_011757.1 3744157 3744435 D PFAM: BolA family protein; KEGG: mex:Mext_3232 BolA family protein; BolA family protein 3744157..3744435 Methylobacterium extorquens CM4 7113689 YP_002422305.1 CDS Mchl_3557 NC_011757.1 3744467 3744889 D PFAM: class I peptide chain release factor; KEGG: mex:Mext_3233 class I peptide chain release factor; class I peptide chain release factor 3744467..3744889 Methylobacterium extorquens CM4 7113690 YP_002422306.1 CDS Mchl_3558 NC_011757.1 3744903 3745661 R PFAM: protein of unknown function DUF1275; KEGG: mex:Mext_3234 hypothetical protein; hypothetical protein complement(3744903..3745661) Methylobacterium extorquens CM4 7113691 YP_002422307.1 CDS Mchl_3559 NC_011757.1 3745697 3746692 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_3235 methyltransferase type 12; type 12 methyltransferase complement(3745697..3746692) Methylobacterium extorquens CM4 7113692 YP_002422308.1 CDS Mchl_3560 NC_011757.1 3746738 3747796 D KEGG: mex:Mext_3236 mRNA 3-end processing factor; mRNA 3-end processing factor 3746738..3747796 Methylobacterium extorquens CM4 7113693 YP_002422309.1 CDS Mchl_3561 NC_011757.1 3747793 3749637 D PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: mex:Mext_3237 ATP dependent DNA ligase; ATP dependent DNA ligase 3747793..3749637 Methylobacterium extorquens CM4 7113694 YP_002422310.1 CDS Mchl_3562 NC_011757.1 3749634 3750116 D PFAM: protein of unknown function UPF0047; KEGG: mex:Mext_3238 hypothetical protein; hypothetical protein 3749634..3750116 Methylobacterium extorquens CM4 7113695 YP_002422311.1 CDS Mchl_3563 NC_011757.1 3750125 3750571 R PFAM: protein of unknown function DUF606; KEGG: mex:Mext_3239 hypothetical protein; hypothetical protein complement(3750125..3750571) Methylobacterium extorquens CM4 7113696 YP_002422312.1 CDS Mchl_3564 NC_011757.1 3750694 3750858 R PFAM: protein of unknown function UPF0057; KEGG: mex:Mext_3240 hypothetical protein; hypothetical protein complement(3750694..3750858) Methylobacterium extorquens CM4 7113697 YP_002422313.1 CDS Mchl_3565 NC_011757.1 3750961 3753162 R PFAM: enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mex:Mext_3241 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-binding 3-hydroxyacyl-CoA dehydrogenase complement(3750961..3753162) Methylobacterium extorquens CM4 7113698 YP_002422314.1 CDS Mchl_3566 NC_011757.1 3753284 3754081 D PFAM: EAL domain protein; KEGG: mex:Mext_3242 EAL domain-containing protein; diguanylate phosphodiesterase 3753284..3754081 Methylobacterium extorquens CM4 7113699 YP_002422315.1 CDS Mchl_3567 NC_011757.1 3754157 3754654 R KEGG: mex:Mext_3243 hypothetical protein; hypothetical protein complement(3754157..3754654) Methylobacterium extorquens CM4 7113700 YP_002422316.1 CDS Mchl_3568 NC_011757.1 3754782 3755990 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(3754782..3755990) Methylobacterium extorquens CM4 7113701 YP_002422317.1 CDS Mchl_3569 NC_011757.1 3756164 3757954 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mex:Mext_3245 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain-containing protein complement(3756164..3757954) Methylobacterium extorquens CM4 7113702 YP_002422318.1 CDS Mchl_3570 NC_011757.1 3758265 3761597 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_3246 Sel1 domain-containing protein; Sel1 domain-containing protein repeat-containing protein 3758265..3761597 Methylobacterium extorquens CM4 7113703 YP_002422319.1 CDS Mchl_3571 NC_011757.1 3762048 3762374 D KEGG: mex:Mext_3247 hypothetical protein; hypothetical protein 3762048..3762374 Methylobacterium extorquens CM4 7113704 YP_002422320.1 CDS Mchl_3572 NC_011757.1 3762432 3763376 R KEGG: mex:Mext_3248 hypothetical protein; hypothetical protein complement(3762432..3763376) Methylobacterium extorquens CM4 7113705 YP_002422321.1 CDS Mchl_3573 NC_011757.1 3763514 3764032 D KEGG: mex:Mext_3249 hypothetical protein; hypothetical protein 3763514..3764032 Methylobacterium extorquens CM4 7113706 YP_002422322.1 CDS Mchl_3574 NC_011757.1 3764029 3764832 D PFAM: phosphoesterase PA-phosphatase related; KEGG: mex:Mext_3250 phosphoesterase PA-phosphatase related; PA-phosphatase-like phosphoesterase 3764029..3764832 Methylobacterium extorquens CM4 7113707 YP_002422323.1 CDS Mchl_3575 NC_011757.1 3764888 3766195 D PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: mex:Mext_3251 oxidoreductase domain-containing protein; oxidoreductase domain-containing protein 3764888..3766195 Methylobacterium extorquens CM4 7113708 YP_002422324.1 CDS Mchl_3576 NC_011757.1 3766309 3766455 R KEGG: mex:Mext_3252 hypothetical protein; hypothetical protein complement(3766309..3766455) Methylobacterium extorquens CM4 7113709 YP_002422325.1 CDS Mchl_3577 NC_011757.1 3766538 3767833 R PFAM: peptidase M16 domain protein; KEGG: mex:Mext_3253 processing peptidase; processing peptidase complement(3766538..3767833) Methylobacterium extorquens CM4 7113710 YP_002422326.1 CDS Mchl_3578 NC_011757.1 3768055 3769467 R KEGG: mex:Mext_3254 threonine synthase; TIGRFAM: threonine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; threonine synthase complement(3768055..3769467) Methylobacterium extorquens CM4 7113711 YP_002422327.1 CDS Mchl_3579 NC_011757.1 3769553 3769966 R KEGG: mex:Mext_3255 hypothetical protein; hypothetical protein complement(3769553..3769966) Methylobacterium extorquens CM4 7113712 YP_002422328.1 CDS Mchl_3580 NC_011757.1 3770063 3770833 R PFAM: Surfeit locus 1 family protein; KEGG: mex:Mext_3256 surfeit locus 1 family protein; Surfeit locus 1 family protein complement(3770063..3770833) Methylobacterium extorquens CM4 7113713 YP_002422329.1 CDS Mchl_3581 NC_011757.1 3770833 3771207 R PFAM: protein of unknown function DUF983; KEGG: mex:Mext_3257 hypothetical protein; hypothetical protein complement(3770833..3771207) Methylobacterium extorquens CM4 7113714 YP_002422330.1 CDS Mchl_3582 NC_011757.1 3771331 3772188 R PFAM: cytochrome C oxidase subunit III; KEGG: mex:Mext_3258 cytochrome C oxidase subunit III; cytochrome C oxidase subunit III complement(3771331..3772188) Methylobacterium extorquens CM4 7113715 YP_002422331.1 CDS Mchl_3583 NC_011757.1 3772335 3772943 R PFAM: cytochrome C oxidase assembly protein CtaG/Cox11; KEGG: mex:Mext_3259 cytochrome C oxidase assembly protein CtaG/Cox11; cytochrome C oxidase assembly protein CtaG/Cox11 complement(3772335..3772943) Methylobacterium extorquens CM4 7113716 YP_002422332.1 CDS Mchl_3584 NC_011757.1 3772956 3773120 R KEGG: mex:Mext_3260 protein CoxF; protein CoxF complement(3772956..3773120) Methylobacterium extorquens CM4 7113717 YP_002422333.1 CDS Mchl_3585 NC_011757.1 3773129 3774082 R converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase complement(3773129..3774082) Methylobacterium extorquens CM4 7113718 YP_002422334.1 CDS Mchl_3586 NC_011757.1 3774248 3775876 R KEGG: mex:Mext_3262 cytochrome C oxidase subunit I; TIGRFAM: cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I; cytochrome C oxidase subunit I complement(3774248..3775876) Methylobacterium extorquens CM4 7113719 YP_002422335.1 CDS Mchl_3587 NC_011757.1 3775954 3776793 R KEGG: mex:Mext_3263 cytochrome C oxidase subunit II; TIGRFAM: cytochrome C oxidase subunit II; PFAM: cytochrome C oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome C oxidase subunit II complement(3775954..3776793) Methylobacterium extorquens CM4 7113720 YP_002422336.1 CDS Mchl_3588 NC_011757.1 3777049 3777924 D TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: mex:Mext_3264 formate dehydrogenase family accessory protein FdhD; formate dehydrogenase family accessory protein FdhD 3777049..3777924 Methylobacterium extorquens CM4 7113721 YP_002422337.1 CDS Mchl_3589 NC_011757.1 3777950 3779002 R KEGG: mex:Mext_3265 hypothetical protein; hypothetical protein complement(3777950..3779002) Methylobacterium extorquens CM4 7113722 YP_002422338.1 CDS Mchl_3590 NC_011757.1 3779639 3784357 D PFAM: glutamine amidotransferase class-II; glutamate synthase subunit alpha domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: mex:Mext_3266 glutamate synthase (ferredoxin); glutamate synthase (ferredoxin) 3779639..3784357 Methylobacterium extorquens CM4 7113723 YP_002422339.1 CDS gltD NC_011757.1 3784481 3785914 D glutamate synthase is composed of subunits alpha and beta; subunit beta is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the subunit alpha, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 3784481..3785914 Methylobacterium extorquens CM4 7113724 YP_002422340.1 CDS Mchl_3592 NC_011757.1 3785993 3786940 R PFAM: beta-lactamase; KEGG: mex:Mext_3268 beta-lactamase domain-containing protein; beta-lactamase complement(3785993..3786940) Methylobacterium extorquens CM4 7113725 YP_002422341.1 CDS Mchl_3593 NC_011757.1 3787119 3788459 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mex:Mext_3269 ATPase domain-containing protein; histidine kinase 3787119..3788459 Methylobacterium extorquens CM4 7113726 YP_002422342.1 CDS Mchl_3594 NC_011757.1 3788468 3789127 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_3270 response regulator receiver; LuxR family transcriptional regulator 3788468..3789127 Methylobacterium extorquens CM4 7113727 YP_002422343.1 CDS Mchl_3595 NC_011757.1 3789155 3790612 R PFAM: protein of unknown function DUF459; KEGG: mex:Mext_3271 hypothetical protein; hypothetical protein complement(3789155..3790612) Methylobacterium extorquens CM4 7113728 YP_002422344.1 CDS Mchl_3596 NC_011757.1 3790883 3792064 R TIGRFAM: lytic murein transglycosylase; PFAM: peptidoglycan-binding protein; KEGG: mex:Mext_3272 lytic murein transglycosylase; lytic murein transglycosylase complement(3790883..3792064) Methylobacterium extorquens CM4 7113729 YP_002422345.1 CDS Mchl_3597 NC_011757.1 3792061 3793053 R TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3273 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(3792061..3793053) Methylobacterium extorquens CM4 7113730 YP_002422346.1 CDS Mchl_3598 NC_011757.1 3793211 3794092 D TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; KEGG: mex:Mext_3274 UTP-glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 3793211..3794092 Methylobacterium extorquens CM4 7113731 YP_002422347.1 CDS Mchl_3599 NC_011757.1 3794334 3795230 R PFAM: N-formylglutamate amidohydrolase; KEGG: mex:Mext_3275 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase complement(3794334..3795230) Methylobacterium extorquens CM4 7113732 YP_002422348.1 CDS Mchl_3600 NC_011757.1 3795537 3795893 D PFAM: response regulator receiver; KEGG: mpo:Mpop_3474 response regulator receiver protein; response regulator receiver protein 3795537..3795893 Methylobacterium extorquens CM4 7113733 YP_002422349.1 CDS Mchl_3601 NC_011757.1 3796120 3796377 D TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: mex:Mext_3277 glutaredoxin 3; glutaredoxin 3 3796120..3796377 Methylobacterium extorquens CM4 7113734 YP_002422350.1 CDS Mchl_3602 NC_011757.1 3796374 3797219 D PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mex:Mext_3278 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3796374..3797219 Methylobacterium extorquens CM4 7113735 YP_002422351.1 CDS Mchl_3603 NC_011757.1 3797340 3797816 D PFAM: protein of unknown function DUF1178; KEGG: mex:Mext_3279 hypothetical protein; hypothetical protein 3797340..3797816 Methylobacterium extorquens CM4 7115428 YP_002422352.1 CDS Mchl_3604 NC_011757.1 3797835 3798899 R KEGG: mex:Mext_3280 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase complement(3797835..3798899) Methylobacterium extorquens CM4 7115593 YP_002422353.1 CDS Mchl_3605 NC_011757.1 3799075 3799734 D TIGRFAM: peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A; KEGG: mex:Mext_3281 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase 3799075..3799734 Methylobacterium extorquens CM4 7115594 YP_002422354.1 CDS Mchl_3606 NC_011757.1 3799839 3800342 D PFAM: conserved hypothetical protein; KEGG: mex:Mext_3282 hypothetical protein; hypothetical protein 3799839..3800342 Methylobacterium extorquens CM4 7115595 YP_002422355.1 CDS mepA NC_011757.1 3800350 3801279 R D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase complement(3800350..3801279) Methylobacterium extorquens CM4 7115596 YP_002422356.1 CDS Mchl_3608 NC_011757.1 3801406 3801801 D PFAM: PRC-barrel domain protein; KEGG: mex:Mext_3285 PRC-barrel domain-containing protein; PRC-barrel domain-containing protein 3801406..3801801 Methylobacterium extorquens CM4 7115597 YP_002422357.1 CDS Mchl_3609 NC_011757.1 3801832 3802179 R KEGG: mex:Mext_3286 hypothetical protein; hypothetical protein complement(3801832..3802179) Methylobacterium extorquens CM4 7115598 YP_002422358.1 CDS Mchl_3610 NC_011757.1 3802265 3803506 R PFAM: Na+/H+ antiporter NhaA; KEGG: mex:Mext_3287 Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA complement(3802265..3803506) Methylobacterium extorquens CM4 7115599 YP_002422359.1 CDS Mchl_3611 NC_011757.1 3803578 3804219 R PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: mex:Mext_3288 redoxin domain-containing protein; redoxin complement(3803578..3804219) Methylobacterium extorquens CM4 7115600 YP_002422360.1 CDS Mchl_3612 NC_011757.1 3804259 3805650 D TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: mex:Mext_3289 argininosuccinate lyase; argininosuccinate lyase 3804259..3805650 Methylobacterium extorquens CM4 7115601 YP_002422361.1 CDS Mchl_3613 NC_011757.1 3805747 3806058 D KEGG: mex:Mext_3290 hypothetical protein; hypothetical protein 3805747..3806058 Methylobacterium extorquens CM4 7115602 YP_002422362.1 CDS Mchl_3614 NC_011757.1 3806214 3806897 D KEGG: mex:Mext_3291 hypothetical protein; hypothetical protein 3806214..3806897 Methylobacterium extorquens CM4 7115603 YP_002422363.1 CDS Mchl_3615 NC_011757.1 3807076 3807330 R KEGG: mex:Mext_3292 hypothetical protein; hypothetical protein complement(3807076..3807330) Methylobacterium extorquens CM4 7115604 YP_002422364.1 CDS Mchl_3616 NC_011757.1 3807772 3808458 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_3293 HAD family hydrolase; HAD-superfamily hydrolase complement(3807772..3808458) Methylobacterium extorquens CM4 7115605 YP_002422365.1 CDS Mchl_3617 NC_011757.1 3808731 3810500 D PFAM: carbamoyltransferase; KEGG: mex:Mext_3294 carbamoyltransferase; carbamoyltransferase 3808731..3810500 Methylobacterium extorquens CM4 7115606 YP_002422366.1 CDS Mchl_3618 NC_011757.1 3810543 3810887 R KEGG: mex:Mext_3295 hypothetical protein; hypothetical protein complement(3810543..3810887) Methylobacterium extorquens CM4 7115607 YP_002422367.1 CDS Mchl_3619 NC_011757.1 3810984 3811658 R KEGG: mex:Mext_3296 haloacid dehalogenase, type II; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase, type II complement(3810984..3811658) Methylobacterium extorquens CM4 7115608 YP_002422368.1 CDS Mchl_3620 NC_011757.1 3811696 3813225 R TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: mex:Mext_3297 integral membrane protein MviN; integral membrane protein MviN complement(3811696..3813225) Methylobacterium extorquens CM4 7115609 YP_002422369.1 CDS Mchl_3621 NC_011757.1 3813526 3814125 R PFAM: manganese and iron superoxide dismutase; KEGG: mex:Mext_3298 superoxide dismutase; superoxide dismutase complement(3813526..3814125) Methylobacterium extorquens CM4 7115610 YP_002422370.1 CDS Mchl_3622 NC_011757.1 3814495 3815481 D KEGG: mex:Mext_3299 hypothetical protein; hypothetical protein 3814495..3815481 Methylobacterium extorquens CM4 7115611 YP_002422371.1 CDS Mchl_3623 NC_011757.1 3815551 3817302 R KEGG: mex:Mext_3300 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase complement(3815551..3817302) Methylobacterium extorquens CM4 7115612 YP_002422372.1 CDS Mchl_3624 NC_011757.1 3817410 3818369 R PFAM: glycosyl transferase family 2; KEGG: mex:Mext_3301 glycosyl transferase; family 2 glycosyl transferase complement(3817410..3818369) Methylobacterium extorquens CM4 7115613 YP_002422373.1 CDS Mchl_3625 NC_011757.1 3818366 3819295 R KEGG: mex:Mext_3302 rhamnosyltransferase; rhamnosyltransferase complement(3818366..3819295) Methylobacterium extorquens CM4 7115614 YP_002422374.1 CDS Mchl_3626 NC_011757.1 3819344 3820846 R PFAM: peptidase M48 Ste24p; KEGG: mex:Mext_3303 peptidase M48 Ste24p; peptidase M48 Ste24p complement(3819344..3820846) Methylobacterium extorquens CM4 7115615 YP_002422375.1 CDS Mchl_3627 NC_011757.1 3820853 3821704 R KEGG: mex:Mext_3304 hypothetical protein; hypothetical protein complement(3820853..3821704) Methylobacterium extorquens CM4 7115616 YP_002422376.1 CDS Mchl_3628 NC_011757.1 3822438 3822845 D PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_3305 helix-turn-helix domain-containing protein; XRE family transcriptional regulator 3822438..3822845 Methylobacterium extorquens CM4 7115617 YP_002422377.1 CDS Mchl_3629 NC_011757.1 3823053 3824228 D PFAM: S-adenosylmethionine synthetase; KEGG: mex:Mext_3306 methionine adenosyltransferase; methionine adenosyltransferase 3823053..3824228 Methylobacterium extorquens CM4 7115618 YP_002422378.1 CDS Mchl_3630 NC_011757.1 3824238 3824975 D KEGG: mex:Mext_3307 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 3824238..3824975 Methylobacterium extorquens CM4 7115619 YP_002422379.1 CDS Mchl_3631 NC_011757.1 3825224 3827956 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I complement(3825224..3827956) Methylobacterium extorquens CM4 7115620 YP_002422380.1 CDS Mchl_3632 NC_011757.1 3828105 3829052 R PFAM: oxidoreductase molybdopterin binding; KEGG: mex:Mext_3309 oxidoreductase molybdopterin binding; molybdopterin binding oxidoreductase complement(3828105..3829052) Methylobacterium extorquens CM4 7115621 YP_002422381.1 CDS Mchl_3633 NC_011757.1 3829049 3829921 R KEGG: mex:Mext_3310 transmembrane b-type cytochrome protein; transmembrane b-type cytochrome protein complement(3829049..3829921) Methylobacterium extorquens CM4 7115622 YP_002422382.1 CDS Mchl_3634 NC_011757.1 3830041 3830352 R KEGG: mex:Mext_3311 hypothetical protein; hypothetical protein complement(3830041..3830352) Methylobacterium extorquens CM4 7115623 YP_002422383.1 CDS pyrB NC_011757.1 3830627 3831574 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 3830627..3831574 Methylobacterium extorquens CM4 7115624 YP_002422384.1 CDS Mchl_3636 NC_011757.1 3831580 3832884 D KEGG: mex:Mext_3313 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase; PFAM: amidohydrolase; amidohydrolase; dihydroorotase 3831580..3832884 Methylobacterium extorquens CM4 7115625 YP_002422385.1 CDS Mchl_3637 NC_011757.1 3832881 3833489 D PFAM: protein of unknown function DUF205; KEGG: mex:Mext_3314 hypothetical protein; hypothetical protein 3832881..3833489 Methylobacterium extorquens CM4 7115626 YP_002422386.1 CDS Mchl_3638 NC_011757.1 3833521 3834714 D TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: mex:Mext_3315 DNA protecting protein DprA; DNA protecting protein DprA 3833521..3834714 Methylobacterium extorquens CM4 7115627 YP_002422387.1 CDS Mchl_3639 NC_011757.1 3834742 3834936 D hypothetical protein 3834742..3834936 Methylobacterium extorquens CM4 7115628 YP_002422388.1 CDS Mchl_3640 NC_011757.1 3835037 3835864 D PFAM: lipolytic protein G-D-S-L family; KEGG: mex:Mext_3316 GDSL family lipase; G-D-S-L family lipolytic protein 3835037..3835864 Methylobacterium extorquens CM4 7115629 YP_002422389.1 CDS Mchl_3641 NC_011757.1 3835861 3837012 D KEGG: mex:Mext_3317 hypothetical protein; hypothetical protein 3835861..3837012 Methylobacterium extorquens CM4 7115630 YP_002422390.1 CDS Mchl_3642 NC_011757.1 3837103 3837777 D PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_3318 ThiJ/PfpI domain-containing protein; ThiJ/PfpI domain-containing protein 3837103..3837777 Methylobacterium extorquens CM4 7115631 YP_002422391.1 CDS Mchl_3643 NC_011757.1 3837774 3838271 R PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: mex:Mext_3319 Holliday junction resolvase YqgF; Holliday junction resolvase YqgF complement(3837774..3838271) Methylobacterium extorquens CM4 7115632 YP_002422392.1 CDS Mchl_3644 NC_011757.1 3838268 3838846 R KEGG: mex:Mext_3320 hypothetical protein; hypothetical protein complement(3838268..3838846) Methylobacterium extorquens CM4 7115633 YP_002422393.1 CDS Mchl_3645 NC_011757.1 3839007 3839183 D KEGG: mex:Mext_3321 hypothetical protein; hypothetical protein 3839007..3839183 Methylobacterium extorquens CM4 7115634 YP_002422394.1 CDS Mchl_3646 NC_011757.1 3839342 3839629 D TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: mex:Mext_3322 glutamyl-tRNA(Gln) amidotransferase subunit C; glutamyl-tRNA(Gln) amidotransferase subunit C 3839342..3839629 Methylobacterium extorquens CM4 7115635 YP_002422395.1 CDS gatA NC_011757.1 3839726 3841207 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 3839726..3841207 Methylobacterium extorquens CM4 7115636 YP_002422396.1 CDS Mchl_3648 NC_011757.1 3841204 3841509 D KEGG: mex:Mext_3324 hypothetical protein; hypothetical protein 3841204..3841509 Methylobacterium extorquens CM4 7115637 YP_002422397.1 CDS Mchl_3649 NC_011757.1 3841568 3841963 R PFAM: excinuclease ABC C subunit domain protein; KEGG: mpo:Mpop_3525 excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain-containing protein complement(3841568..3841963) Methylobacterium extorquens CM4 7115638 YP_002422398.1 CDS Mchl_3650 NC_011757.1 3842036 3845206 R TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_3326 hydrophobe/amphiphile efflux-1 (HAE1) family protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(3842036..3845206) Methylobacterium extorquens CM4 7115639 YP_002422399.1 CDS Mchl_3651 NC_011757.1 3845285 3846610 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_3327 RND family efflux transporter MFP subunit; efflux transporter RND family MFP subunit complement(3845285..3846610) Methylobacterium extorquens CM4 7115640 YP_002422400.1 CDS Mchl_3652 NC_011757.1 3846990 3847418 R KEGG: mex:Mext_3328 hypothetical protein; hypothetical protein complement(3846990..3847418) Methylobacterium extorquens CM4 7115641 YP_002422401.1 CDS Mchl_3653 NC_011757.1 3847653 3848252 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_3329 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 3847653..3848252 Methylobacterium extorquens CM4 7115642 YP_002422402.1 CDS Mchl_3654 NC_011757.1 3848835 3850157 D KEGG: mex:Mext_3330 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-acetylhomoserine/O-acetylserine sulfhydrylase 3848835..3850157 Methylobacterium extorquens CM4 7115643 YP_002422403.1 CDS Mchl_3655 NC_011757.1 3850159 3851181 D PFAM: 2OG-Fe(II) oxygenase; KEGG: mex:Mext_3331 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 3850159..3851181 Methylobacterium extorquens CM4 7115644 YP_002422404.1 CDS Mchl_3656 NC_011757.1 3851178 3851363 D hypothetical protein 3851178..3851363 Methylobacterium extorquens CM4 7115645 YP_002422405.1 CDS Mchl_3658 NC_011757.1 3851925 3852197 R PFAM: Usg family protein; KEGG: mex:Mext_3333 Usg family protein; Usg family protein complement(3851925..3852197) Methylobacterium extorquens CM4 7115647 YP_002422406.1 CDS Mchl_3659 NC_011757.1 3852584 3854206 R TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: mex:Mext_3334 chaperonin GroEL; chaperonin GroEL complement(3852584..3854206) Methylobacterium extorquens CM4 7115648 YP_002422407.1 CDS Mchl_3660 NC_011757.1 3854242 3854532 R PFAM: chaperonin Cpn10; KEGG: mex:Mext_3335 chaperonin Cpn10; chaperonin Cpn10 complement(3854242..3854532) Methylobacterium extorquens CM4 7115649 YP_002422408.1 CDS Mchl_3661 NC_011757.1 3854796 3856019 R PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3336 acyl-CoA dehydrogenase type 2; acyl-CoA dehydrogenase type 2 domain-containing protein complement(3854796..3856019) Methylobacterium extorquens CM4 7115650 YP_002422409.1 CDS Mchl_3662 NC_011757.1 3856309 3858717 R KEGG: mex:Mext_3337 hypothetical protein; hypothetical protein complement(3856309..3858717) Methylobacterium extorquens CM4 7115651 YP_002422410.1 CDS Mchl_3663 NC_011757.1 3858863 3859903 D KEGG: mex:Mext_3338 ABC-type nitrate/sulfonate/bicarbonate transporters periplasmic components-like protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 3858863..3859903 Methylobacterium extorquens CM4 7115652 YP_002422411.1 CDS Mchl_3664 NC_011757.1 3859917 3861125 D PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: mex:Mext_3339 oxidoreductase molybdopterin binding; molybdopterin binding oxidoreductase 3859917..3861125 Methylobacterium extorquens CM4 7115653 YP_002422412.1 CDS Mchl_3665 NC_011757.1 3861115 3861699 D KEGG: mex:Mext_3340 cytochrome C, class I; cytochrome C, class I 3861115..3861699 Methylobacterium extorquens CM4 7115654 YP_002422413.1 CDS Mchl_3666 NC_011757.1 3861696 3862664 D KEGG: mex:Mext_3341 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: substrate-binding region of ABC-type glycine betaine transporter; SMART: extracellular solute-binding protein family 3; aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein 3861696..3862664 Methylobacterium extorquens CM4 7115655 YP_002422414.1 CDS Mchl_3667 NC_011757.1 3862661 3863716 D PFAM: monooxygenase; KEGG: mex:Mext_3342 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 3862661..3863716 Methylobacterium extorquens CM4 7115656 YP_002422415.1 CDS Mchl_3668 NC_011757.1 3863713 3865122 D TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: mex:Mext_3343 xanthine permease; xanthine permease 3863713..3865122 Methylobacterium extorquens CM4 7115657 YP_002422416.1 CDS Mchl_3669 NC_011757.1 3865038 3865694 R PFAM: DSBA oxidoreductase; KEGG: mex:Mext_3344 DsbA oxidoreductase; DSBA oxidoreductase complement(3865038..3865694) Methylobacterium extorquens CM4 7115658 YP_002422417.1 CDS Mchl_3670 NC_011757.1 3865691 3866572 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3345 ABC transporter; ABC transporter complement(3865691..3866572) Methylobacterium extorquens CM4 7115659 YP_002422418.1 CDS Mchl_3671 NC_011757.1 3866569 3867432 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3346 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(3866569..3867432) Methylobacterium extorquens CM4 7115660 YP_002422419.1 CDS Mchl_3672 NC_011757.1 3867429 3868871 R KEGG: mex:Mext_3347 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein complement(3867429..3868871) Methylobacterium extorquens CM4 7115661 YP_002422420.1 CDS Mchl_3673 NC_011757.1 3869207 3869971 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_3348 cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 3869207..3869971 Methylobacterium extorquens CM4 7115662 YP_002422421.1 CDS Mchl_3674 NC_011757.1 3870151 3871122 R PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: mex:Mext_3349 heat domain-containing protein; HEAT domain-containing protein complement(3870151..3871122) Methylobacterium extorquens CM4 7115663 YP_002422422.1 CDS Mchl_3675 NC_011757.1 3871128 3871361 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mex:Mext_3350 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein complement(3871128..3871361) Methylobacterium extorquens CM4 7115664 YP_002422423.1 CDS Mchl_3676 NC_011757.1 3871376 3873124 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: mex:Mext_3351 oxidoreductase; oxidoreductase complement(3871376..3873124) Methylobacterium extorquens CM4 7115665 YP_002422424.1 CDS Mchl_3677 NC_011757.1 3873136 3873459 R PFAM: protein of unknown function DUF971; KEGG: mex:Mext_3352 hypothetical protein; hypothetical protein complement(3873136..3873459) Methylobacterium extorquens CM4 7115666 YP_002422425.1 CDS Mchl_3678 NC_011757.1 3873996 3874169 R KEGG: mex:Mext_3353 hypothetical protein; hypothetical protein complement(3873996..3874169) Methylobacterium extorquens CM4 7115667 YP_002422426.1 CDS Mchl_3679 NC_011757.1 3874580 3876583 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_3354 diguanylate cyclase; diguanylate cyclase/phosphodiesterase complement(3874580..3876583) Methylobacterium extorquens CM4 7115668 YP_002422427.1 CDS Mchl_3680 NC_011757.1 3876976 3878043 D KEGG: mex:Mext_3355 hypothetical protein; hypothetical protein 3876976..3878043 Methylobacterium extorquens CM4 7115669 YP_002422428.1 CDS amiE NC_011757.1 3878913 3879965 R aliphatic amidase; catalyzes the hydrolysis of short-chain aliphatic amides to their organic acids and can also transfer the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates; acylamide amidohydrolase complement(3878913..3879965) Methylobacterium extorquens CM4 7115670 YP_002422429.1 CDS Mchl_3682 NC_011757.1 3880040 3881500 R PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_3373 carbohydrate-selective porin OprB; carbohydrate-selective porin OprB complement(3880040..3881500) Methylobacterium extorquens CM4 7115671 YP_002422430.1 CDS Mchl_3683 NC_011757.1 3881667 3881984 R TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB; KEGG: mex:Mext_3374 FmdB family regulatory protein; FmdB family regulatory protein complement(3881667..3881984) Methylobacterium extorquens CM4 7115672 YP_002422431.1 CDS Mchl_3684 NC_011757.1 3882049 3883278 R PFAM: acetamidase/formamidase; KEGG: mex:Mext_3375 formamidase; formamidase complement(3882049..3883278) Methylobacterium extorquens CM4 7115673 YP_002422432.1 CDS Mchl_3685 NC_011757.1 3883442 3884458 R PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3376 hypothetical protein; hypothetical protein complement(3883442..3884458) Methylobacterium extorquens CM4 7115102 YP_002422433.1 CDS Mchl_3686 NC_011757.1 3884470 3885216 R KEGG: mex:Mext_3377 UreA ABC transporter ATP-binding protein UrtE; TIGRFAM: urea ABC transporter ATP-binding protein UrtE; PFAM: ABC transporter; SMART: ATPase AAA; urea ABC transporter ATP-binding protein UrtE complement(3884470..3885216) Methylobacterium extorquens CM4 7115347 YP_002422434.1 CDS Mchl_3687 NC_011757.1 3885230 3886018 R TIGRFAM: urea ABC transporter ATP-binding protein UrtD; PFAM: ABC transporter; KEGG: mex:Mext_3378 UreA ABC transporter ATP-binding protein UrtD; urea ABC transporter ATP-binding protein UrtD complement(3885230..3886018) Methylobacterium extorquens CM4 7115348 YP_002422435.1 CDS Mchl_3688 NC_011757.1 3886030 3887211 R TIGRFAM: urea ABC transporter permease UrtC; PFAM: inner-membrane translocator; KEGG: mex:Mext_3379 UreA ABC transporter permease UrtC; urea ABC transporter permease UrtC complement(3886030..3887211) Methylobacterium extorquens CM4 7115349 YP_002422436.1 CDS Mchl_3689 NC_011757.1 3887225 3888151 R TIGRFAM: urea ABC transporter permease UrtB; PFAM: inner-membrane translocator; KEGG: mex:Mext_3380 UreA ABC transporter permease UrtB; urea ABC transporter permease UrtB complement(3887225..3888151) Methylobacterium extorquens CM4 7115350 YP_002422437.1 CDS Mchl_3690 NC_011757.1 3888395 3889648 R TIGRFAM: urea ABC transporter urea binding protein; KEGG: mex:Mext_3381 ABC transporter substrate-binding protein; urea ABC transporter urea binding protein complement(3888395..3889648) Methylobacterium extorquens CM4 7115351 YP_002422438.1 CDS Mchl_3691 NC_011757.1 3890106 3893321 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_3382 ATPase domain-containing protein; histidine kinase 3890106..3893321 Methylobacterium extorquens CM4 7115352 YP_002422439.1 CDS Mchl_3692 NC_011757.1 3893314 3894216 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_3383 response regulator receiver; LuxR family transcriptional regulator 3893314..3894216 Methylobacterium extorquens CM4 7115353 YP_002422440.1 CDS Mchl_3693 NC_011757.1 3894692 3895495 D PFAM: invasion associated locus B family protein; KEGG: mex:Mext_3384 invasion associated locus B family protein; invasion associated locus B family protein 3894692..3895495 Methylobacterium extorquens CM4 7115354 YP_002422441.1 CDS Mchl_3694 NC_011757.1 3896046 3896804 D catalyzes the formation of precorrin 6x from precorrin 5; precorrin 6A synthase 3896046..3896804 Methylobacterium extorquens CM4 7115355 YP_002422442.1 CDS Mchl_3695 NC_011757.1 3897029 3898366 D KEGG: mex:Mext_3386 hypothetical protein; hypothetical protein 3897029..3898366 Methylobacterium extorquens CM4 7115356 YP_002422443.1 CDS Mchl_3696 NC_011757.1 3898386 3898952 R KEGG: mex:Mext_3387 hypothetical protein; hypothetical protein complement(3898386..3898952) Methylobacterium extorquens CM4 7115357 YP_002422444.1 CDS Mchl_3697 NC_011757.1 3899313 3900002 D PFAM: cobyrinic acid ac-diamide synthase; KEGG: mex:Mext_3388 cobyrinic acid ac-diamide synthase; cobyrinic acid ac-diamide synthase 3899313..3900002 Methylobacterium extorquens CM4 7115358 YP_002422445.1 CDS Mchl_3698 NC_011757.1 3899986 3900339 D KEGG: mex:Mext_3389 hypothetical protein; hypothetical protein 3899986..3900339 Methylobacterium extorquens CM4 7115359 YP_002422446.1 CDS Mchl_3699 NC_011757.1 3900663 3902030 D TIGRFAM: lipoprotein A; PFAM: Rare lipoprotein A; KEGG: mex:Mext_3390 lipoprotein A; lipoprotein A 3900663..3902030 Methylobacterium extorquens CM4 7115360 YP_002422447.1 CDS Mchl_3700 NC_011757.1 3902210 3904078 R KEGG: mex:Mext_3391 hypothetical protein; hypothetical protein complement(3902210..3904078) Methylobacterium extorquens CM4 7115361 YP_002422448.1 CDS Mchl_3701 NC_011757.1 3904301 3904627 R TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: mex:Mext_3392 iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly accessory protein complement(3904301..3904627) Methylobacterium extorquens CM4 7115362 YP_002422449.1 CDS Mchl_3702 NC_011757.1 3904754 3906007 D KEGG: mex:Mext_3393 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; deoxyguanosinetriphosphate triphosphohydrolase 3904754..3906007 Methylobacterium extorquens CM4 7115363 YP_002422450.1 CDS Mchl_3703 NC_011757.1 3906035 3906574 R KEGG: mex:Mext_3394 hypothetical protein; hypothetical protein complement(3906035..3906574) Methylobacterium extorquens CM4 7115364 YP_002422451.1 CDS Mchl_3704 NC_011757.1 3906719 3907180 D PFAM: thioesterase superfamily protein; KEGG: mex:Mext_3395 thioesterase superfamily protein; thioesterase superfamily protein 3906719..3907180 Methylobacterium extorquens CM4 7115365 YP_002422452.1 CDS Mchl_3705 NC_011757.1 3907275 3909032 D KEGG: mex:Mext_3396 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase 3907275..3909032 Methylobacterium extorquens CM4 7115366 YP_002422453.1 CDS Mchl_3706 NC_011757.1 3909062 3910480 D PFAM: sporulation domain protein; KEGG: mex:Mext_3397 sporulation domain-containing protein; sporulation domain-containing protein 3909062..3910480 Methylobacterium extorquens CM4 7115367 YP_002422454.1 CDS Mchl_3707 NC_011757.1 3910744 3911775 D PFAM: glycoside hydrolase; KEGG: mex:Mext_3398 beta-N-acetylhexosaminidase; beta-N-acetylhexosaminidase 3910744..3911775 Methylobacterium extorquens CM4 7115368 YP_002422455.1 CDS tatA NC_011757.1 3912041 3912328 D TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 3912041..3912328 Methylobacterium extorquens CM4 7115369 YP_002422456.1 CDS Mchl_3709 NC_011757.1 3912473 3912934 D TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: mex:Mext_3400 twin-arginine translocation protein, TatB subunit; twin-arginine translocation protein subunit TatB 3912473..3912934 Methylobacterium extorquens CM4 7115370 YP_002422457.1 CDS Mchl_3710 NC_011757.1 3912931 3913731 D TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: mex:Mext_3401 sec-independent protein translocase, TatC subunit; Sec-independent protein translocase subunit TatC 3912931..3913731 Methylobacterium extorquens CM4 7115371 YP_002422458.1 CDS Mchl_3711 NC_011757.1 3913881 3914579 D KEGG: mex:Mext_3402 hypothetical protein; hypothetical protein 3913881..3914579 Methylobacterium extorquens CM4 7115372 YP_002422459.1 CDS Mchl_3712 NC_011757.1 3914586 3915761 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3403 major facilitator transporter; major facilitator superfamily protein complement(3914586..3915761) Methylobacterium extorquens CM4 7115373 YP_002422460.1 CDS Mchl_3713 NC_011757.1 3916171 3916740 D PFAM: NADPH-dependent FMN reductase; KEGG: mex:Mext_3404 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 3916171..3916740 Methylobacterium extorquens CM4 7115374 YP_002422461.1 CDS Mchl_3714 NC_011757.1 3916742 3917725 D KEGG: mex:Mext_3405 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: substrate-binding region of ABC-type glycine betaine transporter; SMART: extracellular solute-binding protein family 3; aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein 3916742..3917725 Methylobacterium extorquens CM4 7115375 YP_002422462.1 CDS Mchl_3715 NC_011757.1 3917734 3918582 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3406 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 3917734..3918582 Methylobacterium extorquens CM4 7115376 YP_002422463.1 CDS Mchl_3716 NC_011757.1 3918622 3919413 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3407 ABC transporter; ABC transporter 3918622..3919413 Methylobacterium extorquens CM4 7115377 YP_002422464.1 CDS Mchl_3717 NC_011757.1 3919442 3920617 D PFAM: monooxygenase; KEGG: mex:Mext_3408 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 3919442..3920617 Methylobacterium extorquens CM4 7115378 YP_002422465.1 CDS Mchl_3718 NC_011757.1 3920636 3921610 D KEGG: mex:Mext_3409 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: substrate-binding region of ABC-type glycine betaine transporter; SMART: extracellular solute-binding protein family 3; aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein 3920636..3921610 Methylobacterium extorquens CM4 7115379 YP_002422466.1 CDS Mchl_3719 NC_011757.1 3921712 3922674 D KEGG: mex:Mext_3410 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: substrate-binding region of ABC-type glycine betaine transporter; SMART: extracellular solute-binding protein family 3; aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein 3921712..3922674 Methylobacterium extorquens CM4 7115380 YP_002422467.1 CDS Mchl_3720 NC_011757.1 3922709 3924091 D KEGG: mex:Mext_3411 pyridine nucleotide-disulfide oxidoreductase family protein; pyridine nucleotide-disulfide oxidoreductase family protein 3922709..3924091 Methylobacterium extorquens CM4 7115381 YP_002422468.1 CDS Mchl_3721 NC_011757.1 3924427 3924636 D KEGG: mex:Mext_3412 hypothetical protein; hypothetical protein 3924427..3924636 Methylobacterium extorquens CM4 7115382 YP_002422469.1 CDS Mchl_3722 NC_011757.1 3924876 3925562 D KEGG: mex:Mext_3413 hypothetical protein; hypothetical protein 3924876..3925562 Methylobacterium extorquens CM4 7115383 YP_002422470.1 CDS Mchl_3723 NC_011757.1 3925678 3926838 R KEGG: mex:Mext_3414 hypothetical protein; hypothetical protein complement(3925678..3926838) Methylobacterium extorquens CM4 7115384 YP_002422471.1 CDS Mchl_3724 NC_011757.1 3927019 3930369 D PFAM: transglutaminase; transglutaminase domain protein; KEGG: mex:Mext_3415 transglutaminase domain-containing protein; transglutaminase 3927019..3930369 Methylobacterium extorquens CM4 7115385 YP_002422472.1 CDS Mchl_3725 NC_011757.1 3930366 3932906 D PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mex:Mext_3416 hypothetical protein; hypothetical protein 3930366..3932906 Methylobacterium extorquens CM4 7115386 YP_002422473.1 CDS Mchl_3726 NC_011757.1 3932903 3933805 D PFAM: transglutaminase; transglutaminase domain protein; KEGG: mex:Mext_3417 transglutaminase domain-containing protein; transglutaminase 3932903..3933805 Methylobacterium extorquens CM4 7115387 YP_002422474.1 CDS Mchl_3727 NC_011757.1 3933819 3934373 R PFAM: regulatory protein TetR; KEGG: mex:Mext_3418 regulatory protein TetR; TetR family transcriptional regulator complement(3933819..3934373) Methylobacterium extorquens CM4 7115388 YP_002422475.1 CDS Mchl_3728 NC_011757.1 3934569 3935309 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3419 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3934569..3935309 Methylobacterium extorquens CM4 7115389 YP_002422476.1 CDS Mchl_3729 NC_011757.1 3935349 3936734 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3420 major facilitator transporter; major facilitator superfamily protein complement(3935349..3936734) Methylobacterium extorquens CM4 7115390 YP_002422477.1 CDS Mchl_3730 NC_011757.1 3936845 3937432 R KEGG: mex:Mext_3421 hypothetical protein; hypothetical protein complement(3936845..3937432) Methylobacterium extorquens CM4 7115391 YP_002422478.1 CDS Mchl_3731 NC_011757.1 3937677 3939488 D PFAM: beta-lactamase; KEGG: mex:Mext_3422 beta-lactamase; beta-lactamase 3937677..3939488 Methylobacterium extorquens CM4 7115392 YP_002422479.1 CDS Mchl_3732 NC_011757.1 3939677 3941200 D PFAM: aldehyde dehydrogenase; KEGG: mex:Mext_3423 aldehyde dehydrogenase; aldehyde dehydrogenase 3939677..3941200 Methylobacterium extorquens CM4 7115393 YP_002422480.1 CDS Mchl_3733 NC_011757.1 3941690 3943366 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_3424 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3941690..3943366 Methylobacterium extorquens CM4 7115394 YP_002422481.1 CDS Mchl_3734 NC_011757.1 3943476 3944762 R PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mex:Mext_3425 Orn/DAP/Arg decarboxylase 2; Orn/DAP/Arg decarboxylase 2 complement(3943476..3944762) Methylobacterium extorquens CM4 7115395 YP_002422482.1 CDS Mchl_3735 NC_011757.1 3944768 3946285 R PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_3426 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(3944768..3946285) Methylobacterium extorquens CM4 7115396 YP_002422483.1 CDS Mchl_3736 NC_011757.1 3946305 3946556 R KEGG: mex:Mext_3427 hypothetical protein; hypothetical protein complement(3946305..3946556) Methylobacterium extorquens CM4 7115397 YP_002422484.1 CDS Mchl_3737 NC_011757.1 3946778 3947305 D PFAM: DoxX family protein; KEGG: mex:Mext_3428 DoxX family protein; DoxX family protein 3946778..3947305 Methylobacterium extorquens CM4 7115398 YP_002422485.1 CDS Mchl_3738 NC_011757.1 3947262 3948743 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3429 major facilitator transporter; major facilitator superfamily protein complement(3947262..3948743) Methylobacterium extorquens CM4 7115399 YP_002422486.1 CDS Mchl_3739 NC_011757.1 3949062 3949946 D KEGG: mex:Mext_3430 hypothetical protein; hypothetical protein 3949062..3949946 Methylobacterium extorquens CM4 7115400 YP_002422487.1 CDS Mchl_3740 NC_011757.1 3950146 3951951 R PFAM: amidohydrolase; KEGG: mex:Mext_3431 adenine deaminase; adenine deaminase complement(3950146..3951951) Methylobacterium extorquens CM4 7115401 YP_002422488.1 CDS Mchl_3741 NC_011757.1 3952036 3952755 R PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: mex:Mext_3432 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ complement(3952036..3952755) Methylobacterium extorquens CM4 7115402 YP_002422489.1 CDS Mchl_3742 NC_011757.1 3952898 3954025 R PFAM: Ppx/GppA phosphatase; KEGG: mex:Mext_3433 Ppx/GppA phosphatase; Ppx/GppA phosphatase complement(3952898..3954025) Methylobacterium extorquens CM4 7115403 YP_002422490.1 CDS Mchl_3743 NC_011757.1 3954172 3955332 R PFAM: glycosyl transferase family 2; KEGG: mex:Mext_3434 glycosyl transferase; family 2 glycosyl transferase complement(3954172..3955332) Methylobacterium extorquens CM4 7115404 YP_002422491.1 CDS Mchl_3744 NC_011757.1 3955329 3956144 R PFAM: phospholipid/glycerol acyltransferase; KEGG: mex:Mext_3435 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(3955329..3956144) Methylobacterium extorquens CM4 7115405 YP_002422492.1 CDS Mchl_3745 NC_011757.1 3956155 3957693 R TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_3436 phytoene desaturase; phytoene desaturase complement(3956155..3957693) Methylobacterium extorquens CM4 7115406 YP_002422493.1 CDS Mchl_3746 NC_011757.1 3957792 3958652 R PFAM: glutamine amidotransferase class-I; KEGG: mex:Mext_3437 glutamine amidotransferase class-I; class I glutamine amidotransferase complement(3957792..3958652) Methylobacterium extorquens CM4 7115407 YP_002422494.1 CDS Mchl_3747 NC_011757.1 3958848 3960059 R PFAM: ABC transporter; KEGG: mex:Mext_3438 ABC-2 type transporter; ABC transporter complement(3958848..3960059) Methylobacterium extorquens CM4 7115408 YP_002422495.1 CDS Mchl_3748 NC_011757.1 3960056 3961024 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3439 ABC transporter; ABC transporter complement(3960056..3961024) Methylobacterium extorquens CM4 7115409 YP_002422496.1 CDS Mchl_3749 NC_011757.1 3961032 3961460 R KEGG: mex:Mext_3440 hypothetical protein; hypothetical protein complement(3961032..3961460) Methylobacterium extorquens CM4 7115410 YP_002422497.1 CDS Mchl_3750 NC_011757.1 3961460 3963052 R TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_3441 phytoene desaturase; phytoene desaturase complement(3961460..3963052) Methylobacterium extorquens CM4 7115411 YP_002422498.1 CDS Mchl_3751 NC_011757.1 3963166 3964665 R KEGG: mex:Mext_3442 hypothetical protein; hypothetical protein complement(3963166..3964665) Methylobacterium extorquens CM4 7115412 YP_002422499.1 CDS Mchl_3752 NC_011757.1 3964778 3965587 R PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mex:Mext_3443 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU complement(3964778..3965587) Methylobacterium extorquens CM4 7115413 YP_002422500.1 CDS Mchl_3753 NC_011757.1 3965657 3966130 R PFAM: MaoC domain protein dehydratase; KEGG: mex:Mext_3444 dehydratase; MaoC domain-containing protein dehydratase complement(3965657..3966130) Methylobacterium extorquens CM4 7115414 YP_002422501.1 CDS Mchl_3754 NC_011757.1 3966412 3967029 D PFAM: cation efflux protein; KEGG: mex:Mext_3445 cation efflux protein; cation efflux protein 3966412..3967029 Methylobacterium extorquens CM4 7115415 YP_002422502.1 CDS Mchl_3755 NC_011757.1 3967065 3967913 D PFAM: metallophosphoesterase; KEGG: mex:Mext_3446 metallophosphoesterase; metallophosphoesterase 3967065..3967913 Methylobacterium extorquens CM4 7115416 YP_002422503.1 CDS Mchl_3756 NC_011757.1 3968006 3968227 D KEGG: mex:Mext_3447 hypothetical protein; hypothetical protein 3968006..3968227 Methylobacterium extorquens CM4 7115417 YP_002422504.1 CDS Mchl_3757 NC_011757.1 3968352 3969494 D KEGG: mex:Mext_3448 hypothetical protein; hypothetical protein 3968352..3969494 Methylobacterium extorquens CM4 7115418 YP_002422505.1 CDS Mchl_3758 NC_011757.1 3969545 3970156 D PFAM: glutathione S-transferase domain; KEGG: mex:Mext_3449 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein 3969545..3970156 Methylobacterium extorquens CM4 7115419 YP_002422506.1 CDS Mchl_3759 NC_011757.1 3970327 3970539 D KEGG: mex:Mext_3450 hypothetical protein; hypothetical protein 3970327..3970539 Methylobacterium extorquens CM4 7115420 YP_002422507.1 CDS Mchl_3760 NC_011757.1 3970731 3971924 R PFAM: amidinotransferase; KEGG: mex:Mext_3451 non-specific serine/threonine protein kinase; non-specific serine/threonine protein kinase complement(3970731..3971924) Methylobacterium extorquens CM4 7115421 YP_002422508.1 CDS Mchl_3761 NC_011757.1 3972136 3973269 D TIGRFAM: membrane protein; PFAM: conserved hypothetical protein; KEGG: mex:Mext_3452 membrane protein; membrane protein 3972136..3973269 Methylobacterium extorquens CM4 7115422 YP_002422509.1 CDS Mchl_3762 NC_011757.1 3973260 3973883 D PFAM: toluene tolerance family protein; KEGG: mex:Mext_3453 toluene tolerance family protein; toluene tolerance family protein 3973260..3973883 Methylobacterium extorquens CM4 7115423 YP_002422510.1 CDS Mchl_3763 NC_011757.1 3974067 3975263 D TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; KEGG: mex:Mext_3454 glucosyltransferase; hopanoid biosynthesis associated glycosyl transferase protein HpnI 3974067..3975263 Methylobacterium extorquens CM4 7115424 YP_002422511.1 CDS Mchl_3764 NC_011757.1 3975321 3976745 D KEGG: mex:Mext_3455 hopanoid biosynthesis associated radical SAM protein HpnJ; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; hopanoid biosynthesis associated radical SAM protein HpnJ 3975321..3976745 Methylobacterium extorquens CM4 7115425 YP_002422512.1 CDS Mchl_3765 NC_011757.1 3976875 3977717 D TIGRFAM: hopanoid biosynthesis associated protein HpnK; PFAM: YdjC family protein; KEGG: mex:Mext_3456 hopanoid biosynthesis associated protein HpnK; hopanoid biosynthesis associated protein HpnK 3976875..3977717 Methylobacterium extorquens CM4 7115426 YP_002422513.1 CDS Mchl_3766 NC_011757.1 3977976 3978479 D KEGG: mex:Mext_3457 hypothetical protein; hypothetical protein 3977976..3978479 Methylobacterium extorquens CM4 7115427 YP_002422514.1 CDS Mchl_3767 NC_011757.1 3978614 3981262 R TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: mpo:Mpop_3657 hopanoid biosynthesis associated RND transporter like protein HpnN; hopanoid biosynthesis associated RND transporter-like protein HpnN complement(3978614..3981262) Methylobacterium extorquens CM4 7114195 YP_002422515.1 CDS Mchl_3768 NC_011757.1 3982010 3983173 D TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: radical SAM protein; KEGG: mex:Mext_3460 hopanoid biosynthesis associated radical SAM protein HpnH; hopanoid biosynthesis associated radical SAM protein HpnH 3982010..3983173 Methylobacterium extorquens CM4 7116962 YP_002422516.1 CDS Mchl_3769 NC_011757.1 3983368 3984060 R TIGRFAM: hopanoid-associated phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: mex:Mext_3461 hypothetical protein; hopanoid-associated phosphorylase complement(3983368..3984060) Methylobacterium extorquens CM4 7116963 YP_002422517.1 CDS Mchl_3770 NC_011757.1 3984072 3985238 R PFAM: polysaccharide export protein; KEGG: mex:Mext_3462 polysaccharide export protein; polysaccharide export protein complement(3984072..3985238) Methylobacterium extorquens CM4 7116964 YP_002422518.1 CDS Mchl_3771 NC_011757.1 3985542 3986084 D KEGG: mex:Mext_3463 carbohydrate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase 3985542..3986084 Methylobacterium extorquens CM4 7116965 YP_002422519.1 CDS Mchl_3772 NC_011757.1 3986093 3986896 D TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: mex:Mext_3464 Cof-like hydrolase; Cof-like hydrolase 3986093..3986896 Methylobacterium extorquens CM4 7116966 YP_002422520.1 CDS Mchl_3773 NC_011757.1 3987144 3988037 D PFAM: lytic transglycosylase catalytic; KEGG: mex:Mext_3465 lytic transglycosylase catalytic; lytic transglycosylase 3987144..3988037 Methylobacterium extorquens CM4 7116967 YP_002422521.1 CDS rpmF NC_011757.1 3988195 3988383 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 3988195..3988383 Methylobacterium extorquens CM4 7116968 YP_002422522.1 CDS Mchl_3775 NC_011757.1 3988466 3988714 R KEGG: mex:Mext_3467 hypothetical protein; hypothetical protein complement(3988466..3988714) Methylobacterium extorquens CM4 7116969 YP_002422523.1 CDS Mchl_3776 NC_011757.1 3988936 3989547 R TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: mex:Mext_3468 polyhydroxyalkanoate synthesis repressor PhaR; polyhydroxyalkonate synthesis repressor, PhaR complement(3988936..3989547) Methylobacterium extorquens CM4 7116970 YP_002422524.1 CDS Mchl_3777 NC_011757.1 3989873 3991057 D KEGG: mex:Mext_3469 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: thiolase; acetyl-CoA acetyltransferase 3989873..3991057 Methylobacterium extorquens CM4 7116971 YP_002422525.1 CDS Mchl_3778 NC_011757.1 3991330 3992058 D TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3470 acetoacetyl-CoA reductase; acetoacetyl-CoA reductase 3991330..3992058 Methylobacterium extorquens CM4 7116972 YP_002422526.1 CDS Mchl_3779 NC_011757.1 3992214 3993188 D acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 3992214..3993188 Methylobacterium extorquens CM4 7116973 YP_002422527.1 CDS Mchl_3780 NC_011757.1 3993217 3994476 R PFAM: peptidase M29 aminopeptidase II; KEGG: mex:Mext_3472 peptidase M29 aminopeptidase II; peptidase M29 aminopeptidase II complement(3993217..3994476) Methylobacterium extorquens CM4 7116974 YP_002422528.1 CDS Mchl_3781 NC_011757.1 3994554 3994847 R KEGG: mex:Mext_3473 hypothetical protein; hypothetical protein complement(3994554..3994847) Methylobacterium extorquens CM4 7116975 YP_002422529.1 CDS Mchl_3782 NC_011757.1 3995225 3996676 R PFAM: FAD linked oxidase; KEGG: mex:Mext_3474 FAD linked oxidase domain-containing protein; FAD linked oxidase complement(3995225..3996676) Methylobacterium extorquens CM4 7116976 YP_002422530.1 CDS Mchl_3783 NC_011757.1 3996884 3997579 D PFAM: fumarylacetoacetate hydrolase; KEGG: mex:Mext_3475 fumarylacetoacetate hydrolase; fumarylacetoacetate hydrolase 3996884..3997579 Methylobacterium extorquens CM4 7116977 YP_002422531.1 CDS Mchl_3784 NC_011757.1 3997627 3998103 D PFAM: NUDIX hydrolase; KEGG: mex:Mext_3476 NUDIX hydrolase; NUDIX hydrolase 3997627..3998103 Methylobacterium extorquens CM4 7116978 YP_002422532.1 CDS Mchl_3785 NC_011757.1 3998556 3999833 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mex:Mext_3477 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 3998556..3999833 Methylobacterium extorquens CM4 7116980 YP_002422533.1 CDS Mchl_3786 NC_011757.1 3999989 4000717 R PFAM: Resolvase domain; KEGG: mex:Mext_3478 resolvase domain-containing protein; Resolvase domain complement(3999989..4000717) Methylobacterium extorquens CM4 7116981 YP_002422534.1 CDS Mchl_3787 NC_011757.1 4000832 4001908 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3479 regulatory protein LysR; LysR family transcriptional regulator 4000832..4001908 Methylobacterium extorquens CM4 7116982 YP_002422535.1 CDS Mchl_3788 NC_011757.1 4002302 4003051 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_3480 cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 4002302..4003051 Methylobacterium extorquens CM4 7116983 YP_002422536.1 CDS Mchl_3789 NC_011757.1 4003234 4003512 R KEGG: mex:Mext_3481 hypothetical protein; hypothetical protein complement(4003234..4003512) Methylobacterium extorquens CM4 7116984 YP_002422537.1 CDS Mchl_3790 NC_011757.1 4003832 4004095 D KEGG: mex:Mext_3482 hypothetical protein; hypothetical protein 4003832..4004095 Methylobacterium extorquens CM4 7116985 YP_002422538.1 CDS Mchl_3791 NC_011757.1 4004226 4004648 D KEGG: mex:Mext_3483 hypothetical protein; hypothetical protein 4004226..4004648 Methylobacterium extorquens CM4 7116986 YP_002422539.1 CDS Mchl_3792 NC_011757.1 4004749 4005825 R PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3484 acyl-CoA dehydrogenase type 2; acyl-CoA dehydrogenase type 2 domain-containing protein complement(4004749..4005825) Methylobacterium extorquens CM4 7116987 YP_002422540.1 CDS Mchl_3793 NC_011757.1 4005831 4006388 R PFAM: OsmC family protein; KEGG: mex:Mext_3485 OsmC family protein; OsmC family protein complement(4005831..4006388) Methylobacterium extorquens CM4 7116988 YP_002422541.1 CDS Mchl_3794 NC_011757.1 4006400 4007257 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3486 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(4006400..4007257) Methylobacterium extorquens CM4 7116989 YP_002422542.1 CDS Mchl_3795 NC_011757.1 4007254 4008480 R KEGG: mex:Mext_3487 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal complement(4007254..4008480) Methylobacterium extorquens CM4 7116990 YP_002422543.1 CDS Mchl_3796 NC_011757.1 4008503 4009258 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3488 ABC transporter; ABC transporter complement(4008503..4009258) Methylobacterium extorquens CM4 7116991 YP_002422544.1 CDS Mchl_3797 NC_011757.1 4009930 4011384 D PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_3489 carbohydrate-selective porin OprB; carbohydrate-selective porin OprB 4009930..4011384 Methylobacterium extorquens CM4 7116992 YP_002422545.1 CDS Mchl_3798 NC_011757.1 4011439 4012842 D KEGG: mex:Mext_3490 monooxygenase; monooxygenase 4011439..4012842 Methylobacterium extorquens CM4 7116993 YP_002422546.1 CDS Mchl_3799 NC_011757.1 4012848 4013618 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3491 ABC transporter; ABC transporter 4012848..4013618 Methylobacterium extorquens CM4 7116994 YP_002422547.1 CDS Mchl_3800 NC_011757.1 4013629 4014510 D PFAM: inner-membrane translocator; KEGG: mex:Mext_3492 inner-membrane translocator; inner-membrane translocator 4013629..4014510 Methylobacterium extorquens CM4 7116995 YP_002422548.1 CDS Mchl_3801 NC_011757.1 4014515 4015558 D PFAM: inner-membrane translocator; KEGG: mex:Mext_3493 inner-membrane translocator; inner-membrane translocator 4014515..4015558 Methylobacterium extorquens CM4 7116996 YP_002422549.1 CDS Mchl_3802 NC_011757.1 4015593 4016966 D KEGG: mex:Mext_3494 hypothetical protein; hypothetical protein 4015593..4016966 Methylobacterium extorquens CM4 7116997 YP_002422550.1 CDS Mchl_3803 NC_011757.1 4016963 4017724 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3495 ABC transporter; ABC transporter 4016963..4017724 Methylobacterium extorquens CM4 7116998 YP_002422551.1 CDS Mchl_3804 NC_011757.1 4017756 4019018 D PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3496 acyl-CoA dehydrogenase type 2; acyl-CoA dehydrogenase type 2 domain-containing protein 4017756..4019018 Methylobacterium extorquens CM4 7116999 YP_002422552.1 CDS Mchl_3805 NC_011757.1 4019659 4020135 D PFAM: heat shock protein Hsp20; KEGG: mex:Mext_3498 heat shock protein HSP20; heat shock protein Hsp20 4019659..4020135 Methylobacterium extorquens CM4 7117000 YP_002422553.1 CDS Mchl_3807 NC_011757.1 4021094 4021906 D PFAM: UspA domain protein; KEGG: mex:Mext_3500 UspA domain-containing protein; UspA domain-containing protein 4021094..4021906 Methylobacterium extorquens CM4 7117002 YP_002422554.1 CDS Mchl_3808 NC_011757.1 4022051 4022500 D KEGG: mex:Mext_3501 hypothetical protein; hypothetical protein 4022051..4022500 Methylobacterium extorquens CM4 7117003 YP_002422555.1 CDS Mchl_3809 NC_011757.1 4022531 4022857 R PFAM: transport-associated; KEGG: mex:Mext_3502 transport-associated; transport-associated complement(4022531..4022857) Methylobacterium extorquens CM4 7117004 YP_002422556.1 CDS Mchl_3810 NC_011757.1 4022890 4023111 R KEGG: mex:Mext_3503 hypothetical protein; hypothetical protein complement(4022890..4023111) Methylobacterium extorquens CM4 7117005 YP_002422557.1 CDS Mchl_3811 NC_011757.1 4023376 4024236 D PFAM: UspA domain protein; KEGG: mex:Mext_3504 UspA domain-containing protein; UspA domain-containing protein 4023376..4024236 Methylobacterium extorquens CM4 7117006 YP_002422558.1 CDS Mchl_3812 NC_011757.1 4024354 4025043 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_3505 regulatory protein Crp; Crp/Fnr family transcriptional regulator complement(4024354..4025043) Methylobacterium extorquens CM4 7117007 YP_002422559.1 CDS Mchl_3813 NC_011757.1 4025580 4026188 R PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mex:Mext_3506 response regulator receiver; LuxR family transcriptional regulator complement(4025580..4026188) Methylobacterium extorquens CM4 7117008 YP_002422560.1 CDS Mchl_3814 NC_011757.1 4026192 4027739 R KEGG: mex:Mext_3507 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase complement(4026192..4027739) Methylobacterium extorquens CM4 7117009 YP_002422561.1 CDS Mchl_3815 NC_011757.1 4028082 4028942 D PFAM: UspA domain protein; KEGG: mex:Mext_3508 UspA domain-containing protein; UspA domain-containing protein 4028082..4028942 Methylobacterium extorquens CM4 7117010 YP_002422562.1 CDS Mchl_3816 NC_011757.1 4029160 4030215 D PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mex:Mext_3509 metal-dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase 4029160..4030215 Methylobacterium extorquens CM4 7117011 YP_002422563.1 CDS Mchl_3817 NC_011757.1 4030346 4033075 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: mex:Mext_3510 ATPase domain-containing protein; Hpt sensor hybrid histidine kinase complement(4030346..4033075) Methylobacterium extorquens CM4 7117012 YP_002422564.1 CDS Mchl_3818 NC_011757.1 4033244 4034665 R KEGG: mex:Mext_3511 hypothetical protein; hypothetical protein complement(4033244..4034665) Methylobacterium extorquens CM4 7117013 YP_002422565.1 CDS Mchl_3819 NC_011757.1 4034864 4035472 R PFAM: TadE family protein; KEGG: mex:Mext_3512 TadE family protein; TadE family protein complement(4034864..4035472) Methylobacterium extorquens CM4 7117014 YP_002422566.1 CDS Mchl_3820 NC_011757.1 4035469 4036062 R PFAM: TadE family protein; KEGG: mex:Mext_3513 TadE family protein; TadE family protein complement(4035469..4036062) Methylobacterium extorquens CM4 7117015 YP_002422567.1 CDS Mchl_3822 NC_011757.1 4037920 4038186 D KEGG: mpo:Mpop_4259 hypothetical protein; hypothetical protein 4037920..4038186 Methylobacterium extorquens CM4 7117017 YP_002422568.1 CDS Mchl_3823 NC_011757.1 4038224 4038901 D PFAM: transferase hexapeptide repeat containing protein; KEGG: gox:GOX1539 acetyltransferase; transferase 4038224..4038901 Methylobacterium extorquens CM4 7117018 YP_002422569.1 CDS Mchl_3825 NC_011757.1 4040537 4041169 R PFAM: adenylylsulfate kinase; KEGG: mrd:Mrad2831_1882 adenylyl-sulfate kinase; adenylyl-sulfate kinase complement(4040537..4041169) Methylobacterium extorquens CM4 7117020 YP_002422570.1 CDS Mchl_3826 NC_011757.1 4041722 4041934 D KEGG: mex:Mext_0808 hypothetical protein; hypothetical protein 4041722..4041934 Methylobacterium extorquens CM4 7117021 YP_002422571.1 CDS Mchl_3827 NC_011757.1 4041965 4042246 R KEGG: mex:Mext_0807 hypothetical protein; hypothetical protein complement(4041965..4042246) Methylobacterium extorquens CM4 7117022 YP_002422572.1 CDS Mchl_3828 NC_011757.1 4042611 4042754 R KEGG: mpo:Mpop_3761 hypothetical protein; hypothetical protein complement(4042611..4042754) Methylobacterium extorquens CM4 7117023 YP_002422573.1 CDS Mchl_3829 NC_011757.1 4042870 4043334 R PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4463 ROSMUCR transcriptional regulator; MucR family transcriptional regulator complement(4042870..4043334) Methylobacterium extorquens CM4 7117024 YP_002422574.1 CDS Mchl_3830 NC_011757.1 4043636 4044094 R hypothetical protein complement(4043636..4044094) Methylobacterium extorquens CM4 7117025 YP_002422575.1 CDS Mchl_3831 NC_011757.1 4044091 4044552 R hypothetical protein complement(4044091..4044552) Methylobacterium extorquens CM4 7117026 YP_002422576.1 CDS Mchl_3832 NC_011757.1 4044566 4044877 R KEGG: mex:Mext_4382 hypothetical protein; hypothetical protein complement(4044566..4044877) Methylobacterium extorquens CM4 7117027 YP_002422577.1 CDS Mchl_3833 NC_011757.1 4044874 4045305 R KEGG: mex:Mext_4382 hypothetical protein; hypothetical protein complement(4044874..4045305) Methylobacterium extorquens CM4 7117028 YP_002422578.1 CDS Mchl_3834 NC_011757.1 4045503 4046204 R PFAM: peptidoglycan-binding protein; KEGG: mex:Mext_4383 peptidoglycan binding domain-containing protein; peptidoglycan-binding protein complement(4045503..4046204) Methylobacterium extorquens CM4 7117029 YP_002422579.1 CDS Mchl_3835 NC_011757.1 4046698 4046994 R hypothetical protein complement(4046698..4046994) Methylobacterium extorquens CM4 7117030 YP_002422580.1 CDS Mchl_3836 NC_011757.1 4047005 4047589 R KEGG: azc:AZC_2161 hypothetical protein; hypothetical protein complement(4047005..4047589) Methylobacterium extorquens CM4 7117031 YP_002422581.1 CDS Mchl_3837 NC_011757.1 4047595 4048920 R KEGG: mrd:Mrad2831_4981 hypothetical protein; hypothetical protein complement(4047595..4048920) Methylobacterium extorquens CM4 7117032 YP_002422582.1 CDS Mchl_3838 NC_011757.1 4049497 4049832 R hypothetical protein complement(4049497..4049832) Methylobacterium extorquens CM4 7117033 YP_002422583.1 CDS Mchl_3841 NC_011757.1 4051672 4051938 D KEGG: mpo:Mpop_4259 hypothetical protein; hypothetical protein 4051672..4051938 Methylobacterium extorquens CM4 7117037 YP_002422584.1 CDS Mchl_3842 NC_011757.1 4051963 4052847 D KEGG: azc:AZC_0734 hypothetical protein; hypothetical protein 4051963..4052847 Methylobacterium extorquens CM4 7117038 YP_002422585.1 CDS Mchl_3845 NC_011757.1 4053763 4054830 D KEGG: mrd:Mrad2831_5645 hypothetical protein; hypothetical protein 4053763..4054830 Methylobacterium extorquens CM4 7117041 YP_002422586.1 CDS Mchl_3846 NC_011757.1 4054988 4055200 D KEGG: mpo:Mpop_3765 hypothetical protein; hypothetical protein 4054988..4055200 Methylobacterium extorquens CM4 7117042 YP_002422587.1 CDS Mchl_3847 NC_011757.1 4055205 4055402 D KEGG: mpo:Mpop_4256 hypothetical protein; hypothetical protein 4055205..4055402 Methylobacterium extorquens CM4 7114855 YP_002422588.1 CDS Mchl_3848 NC_011757.1 4055559 4056362 D PFAM: ABC transporter; KEGG: mpo:Mpop_2382 ABC-2 type transporter; ABC transporter 4055559..4056362 Methylobacterium extorquens CM4 7114857 YP_002422589.1 CDS Mchl_3849 NC_011757.1 4056626 4058155 R KEGG: met:M446_0253 capsular polysaccharide biosynthesis protein-like protein; hypothetical protein complement(4056626..4058155) Methylobacterium extorquens CM4 7114858 YP_002422590.1 CDS Mchl_3850 NC_011757.1 4058196 4058336 R hypothetical protein complement(4058196..4058336) Methylobacterium extorquens CM4 7114859 YP_002422591.1 CDS Mchl_3851 NC_011757.1 4058764 4059972 R KEGG: mpo:Mpop_4886 hypothetical protein; hypothetical protein complement(4058764..4059972) Methylobacterium extorquens CM4 7114860 YP_002422592.1 CDS Mchl_3852 NC_011757.1 4060264 4060620 R KEGG: mrd:Mrad2831_5670 hypothetical protein; hypothetical protein complement(4060264..4060620) Methylobacterium extorquens CM4 7114861 YP_002422593.1 CDS Mchl_3853 NC_011757.1 4060625 4061041 R KEGG: mrd:Mrad2831_5671 hypothetical protein; hypothetical protein complement(4060625..4061041) Methylobacterium extorquens CM4 7114862 YP_002422594.1 CDS Mchl_3854 NC_011757.1 4061038 4061304 R KEGG: mrd:Mrad2831_5672 hypothetical protein; hypothetical protein complement(4061038..4061304) Methylobacterium extorquens CM4 7114863 YP_002422595.1 CDS Mchl_3855 NC_011757.1 4061307 4062140 R KEGG: eli:ELI_07940 bacteriophage-acquired protein; hypothetical protein complement(4061307..4062140) Methylobacterium extorquens CM4 7114864 YP_002422596.1 CDS Mchl_3856 NC_011757.1 4062473 4063603 D KEGG: mpo:Mpop_4404 capsular polysaccharide biosynthesis protein-like protein; capsular polysaccharide biosynthesis protein-like protein 4062473..4063603 Methylobacterium extorquens CM4 7114865 YP_002422597.1 CDS Mchl_3857 NC_011757.1 4063665 4063955 R PFAM: Rare lipoprotein A; KEGG: cyt:cce_3687 hypothetical protein; Rare lipoprotein A complement(4063665..4063955) Methylobacterium extorquens CM4 7114866 YP_002422598.1 CDS Mchl_3858 NC_011757.1 4064039 4065484 R KEGG: mlo:mll4444 hypothetical protein; hypothetical protein complement(4064039..4065484) Methylobacterium extorquens CM4 7114867 YP_002422599.1 CDS Mchl_3859 NC_011757.1 4065481 4065774 R hypothetical protein complement(4065481..4065774) Methylobacterium extorquens CM4 7114868 YP_002422600.1 CDS Mchl_3860 NC_011757.1 4065869 4067128 R KEGG: swi:Swit_4452 hypothetical protein; hypothetical protein complement(4065869..4067128) Methylobacterium extorquens CM4 7114869 YP_002422601.1 CDS Mchl_3861 NC_011757.1 4067141 4068007 R KEGG: mca:MCA1228 TolA protein; hypothetical protein complement(4067141..4068007) Methylobacterium extorquens CM4 7114870 YP_002422602.1 CDS Mchl_3862 NC_011757.1 4068149 4068460 R hypothetical protein complement(4068149..4068460) Methylobacterium extorquens CM4 7114871 YP_002422603.1 CDS Mchl_3863 NC_011757.1 4068560 4069057 R hypothetical protein complement(4068560..4069057) Methylobacterium extorquens CM4 7114872 YP_002422604.1 CDS Mchl_3864 NC_011757.1 4069060 4069377 R KEGG: nar:Saro_3000 hypothetical protein; hypothetical protein complement(4069060..4069377) Methylobacterium extorquens CM4 7114873 YP_002422605.1 CDS Mchl_3865 NC_011757.1 4069377 4070162 R KEGG: bvi:Bcep1808_1171 hypothetical protein; hypothetical protein complement(4069377..4070162) Methylobacterium extorquens CM4 7114874 YP_002422606.1 CDS Mchl_3866 NC_011757.1 4070199 4070441 D KEGG: mpo:Mpop_2745 hypothetical protein; hypothetical protein 4070199..4070441 Methylobacterium extorquens CM4 7114875 YP_002422607.1 CDS Mchl_3867 NC_011757.1 4070441 4070734 D hypothetical protein 4070441..4070734 Methylobacterium extorquens CM4 7114876 YP_002422608.1 CDS Mchl_3868 NC_011757.1 4070731 4070970 D KEGG: met:M446_4072 hypothetical protein; hypothetical protein 4070731..4070970 Methylobacterium extorquens CM4 7114877 YP_002422609.1 CDS Mchl_3869 NC_011757.1 4071240 4072385 D PFAM: integrase family protein; KEGG: nha:Nham_3311 phage integrase; integrase family protein 4071240..4072385 Methylobacterium extorquens CM4 7114878 YP_002422610.1 CDS Mchl_3870 NC_011757.1 4072809 4073204 D KEGG: mex:Mext_3583 hypothetical protein; hypothetical protein 4072809..4073204 Methylobacterium extorquens CM4 7114879 YP_002422611.1 CDS Mchl_3871 NC_011757.1 4073370 4073525 R hypothetical protein complement(4073370..4073525) Methylobacterium extorquens CM4 7114880 YP_002422612.1 CDS Mchl_3872 NC_011757.1 4073763 4073864 R hypothetical protein complement(4073763..4073864) Methylobacterium extorquens CM4 7114881 YP_002422613.1 CDS Mchl_3873 NC_011757.1 4074013 4074231 D KEGG: mpo:Mpop_1569 hypothetical protein; hypothetical protein 4074013..4074231 Methylobacterium extorquens CM4 7114882 YP_002422614.1 CDS Mchl_3874 NC_011757.1 4074228 4074551 D KEGG: mex:Mext_3584 hypothetical protein; hypothetical protein 4074228..4074551 Methylobacterium extorquens CM4 7114883 YP_002422615.1 CDS Mchl_3875 NC_011757.1 4074646 4075707 R PFAM: endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_3585 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase complement(4074646..4075707) Methylobacterium extorquens CM4 7114884 YP_002422616.1 CDS Mchl_3876 NC_011757.1 4075837 4076490 R PFAM: protein of unknown function DUF159; KEGG: mex:Mext_3586 hypothetical protein; hypothetical protein complement(4075837..4076490) Methylobacterium extorquens CM4 7114885 YP_002422617.1 CDS Mchl_3877 NC_011757.1 4076637 4077353 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_3587 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(4076637..4077353) Methylobacterium extorquens CM4 7114886 YP_002422618.1 CDS Mchl_3878 NC_011757.1 4077736 4078098 D KEGG: mex:Mext_3588 hypothetical protein; hypothetical protein 4077736..4078098 Methylobacterium extorquens CM4 7114887 YP_002422619.1 CDS Mchl_3879 NC_011757.1 4078233 4078484 D KEGG: mex:Mext_3589 hypothetical protein; hypothetical protein 4078233..4078484 Methylobacterium extorquens CM4 7114888 YP_002422620.1 CDS Mchl_3880 NC_011757.1 4079236 4079475 D KEGG: mex:Mext_3590 hypothetical protein; hypothetical protein 4079236..4079475 Methylobacterium extorquens CM4 7114889 YP_002422621.1 CDS Mchl_3881 NC_011757.1 4079775 4080230 D KEGG: mex:Mext_3591 hypothetical protein; hypothetical protein 4079775..4080230 Methylobacterium extorquens CM4 7114890 YP_002422622.1 CDS Mchl_3882 NC_011757.1 4080319 4080528 D KEGG: mpo:Mpop_4880 hypothetical protein; hypothetical protein 4080319..4080528 Methylobacterium extorquens CM4 7114891 YP_002422623.1 CDS Mchl_3883 NC_011757.1 4080682 4080981 D KEGG: mex:Mext_3592 hypothetical protein; hypothetical protein 4080682..4080981 Methylobacterium extorquens CM4 7114892 YP_002422624.1 CDS Mchl_3884 NC_011757.1 4081149 4081340 R KEGG: mex:Mext_3593 hypothetical protein; hypothetical protein complement(4081149..4081340) Methylobacterium extorquens CM4 7114893 YP_002422625.1 CDS Mchl_3885 NC_011757.1 4081475 4081720 D KEGG: mex:Mext_3594 hypothetical protein; hypothetical protein 4081475..4081720 Methylobacterium extorquens CM4 7114894 YP_002422626.1 CDS Mchl_3886 NC_011757.1 4081772 4081975 R KEGG: mpo:Mpop_4270 hypothetical protein; hypothetical protein complement(4081772..4081975) Methylobacterium extorquens CM4 7114895 YP_002422627.1 CDS Mchl_3887 NC_011757.1 4082077 4082385 R KEGG: mex:Mext_3595 hypothetical protein; hypothetical protein complement(4082077..4082385) Methylobacterium extorquens CM4 7114896 YP_002422628.1 CDS Mchl_3888 NC_011757.1 4082454 4082954 R transcriptional regulator that represses the manganese transporter MntH when manganese is present; manganese transport regulator MntR complement(4082454..4082954) Methylobacterium extorquens CM4 7114897 YP_002422629.1 CDS Mchl_3889 NC_011757.1 4083337 4084671 D TIGRFAM: Mn2+/Fe2+ transporter NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: mex:Mext_3597 Mn2+/Fe2+ transporter; NRAMP family Mn2+/Fe2+ transporter 4083337..4084671 Methylobacterium extorquens CM4 7114898 YP_002422630.1 CDS Mchl_3890 NC_011757.1 4084684 4085574 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3598 LysR substrate-binding; LysR family transcriptional regulator complement(4084684..4085574) Methylobacterium extorquens CM4 7114899 YP_002422631.1 CDS Mchl_3891 NC_011757.1 4085752 4087077 D PFAM: sodium/sulfate symporter; citrate transporter; KEGG: mex:Mext_3599 sodium/sulfate symporter; sodium/sulfate symporter 4085752..4087077 Methylobacterium extorquens CM4 7114900 YP_002422632.1 CDS Mchl_3892 NC_011757.1 4087205 4087606 D TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: mex:Mext_3600 succinate dehydrogenase, cytochrome b556 subunit; succinate dehydrogenase, cytochrome b556 subunit 4087205..4087606 Methylobacterium extorquens CM4 7114901 YP_002422633.1 CDS Mchl_3893 NC_011757.1 4087615 4088034 D TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: mpo:Mpop_4277 succinate dehydrogenase, hydrophobic membrane anchor protein; succinate dehydrogenase, hydrophobic membrane anchor protein 4087615..4088034 Methylobacterium extorquens CM4 7114902 YP_002422634.1 CDS sdhA NC_011757.1 4088064 4089881 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 4088064..4089881 Methylobacterium extorquens CM4 7114903 YP_002422635.1 CDS Mchl_3895 NC_011757.1 4089926 4090486 D KEGG: mex:Mext_3603 hypothetical protein; hypothetical protein 4089926..4090486 Methylobacterium extorquens CM4 7114904 YP_002422636.1 CDS Mchl_3896 NC_011757.1 4090543 4091367 D TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: mex:Mext_3604 succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein 4090543..4091367 Methylobacterium extorquens CM4 7114905 YP_002422637.1 CDS Mchl_3897 NC_011757.1 4091611 4092171 D KEGG: mex:Mext_3605 outer membrane lipoprotein omp19; outer membrane lipoprotein omp19 4091611..4092171 Methylobacterium extorquens CM4 7114906 YP_002422638.1 CDS Mchl_3898 NC_011757.1 4092287 4094230 R KEGG: mex:Mext_3606 hypothetical protein; hypothetical protein complement(4092287..4094230) Methylobacterium extorquens CM4 7114907 YP_002422639.1 CDS Mchl_3899 NC_011757.1 4094313 4095335 D KEGG: mex:Mext_3607 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein 4094313..4095335 Methylobacterium extorquens CM4 7114908 YP_002422640.1 CDS Mchl_3900 NC_011757.1 4097389 4098561 D hypothetical protein 4097389..4098561 Methylobacterium extorquens CM4 7114909 YP_002422641.1 CDS Mchl_3901 NC_011757.1 4098659 4099102 R PFAM: protein of unknown function DUF606; KEGG: mex:Mext_3609 hypothetical protein; hypothetical protein complement(4098659..4099102) Methylobacterium extorquens CM4 7114910 YP_002422642.1 CDS Mchl_3902 NC_011757.1 4099540 4100304 D PFAM: enoyl-CoA hydratase/isomerase; KEGG: mex:Mext_3610 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 4099540..4100304 Methylobacterium extorquens CM4 7114911 YP_002422643.1 CDS Mchl_3903 NC_011757.1 4100313 4101164 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3611 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4100313..4101164 Methylobacterium extorquens CM4 7114912 YP_002422644.1 CDS Mchl_3904 NC_011757.1 4101161 4102015 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3612 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4101161..4102015 Methylobacterium extorquens CM4 7114913 YP_002422645.1 CDS Mchl_3905 NC_011757.1 4102041 4103045 D TIGRFAM: magnesium and cobalt transporter CorA; PFAM: Mg+2 transporter protein CorA; KEGG: mex:Mext_3613 magnesium and cobalt transporter CorA; magnesium and cobalt transporter CorA 4102041..4103045 Methylobacterium extorquens CM4 7114914 YP_002422646.1 CDS Mchl_3906 NC_011757.1 4103256 4103798 D PFAM: protein of unknown function DUF892; KEGG: mex:Mext_3614 hypothetical protein; hypothetical protein 4103256..4103798 Methylobacterium extorquens CM4 7114915 YP_002422647.1 CDS Mchl_3907 NC_011757.1 4104307 4106004 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0667 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4104307..4106004 Methylobacterium extorquens CM4 7114916 YP_002422648.1 CDS Mchl_3908 NC_011757.1 4106106 4106387 R KEGG: mex:Mext_3617 hypothetical protein; hypothetical protein complement(4106106..4106387) Methylobacterium extorquens CM4 7114917 YP_002422649.1 CDS Mchl_3909 NC_011757.1 4107071 4107322 D KEGG: mex:Mext_3618 hypothetical protein; hypothetical protein 4107071..4107322 Methylobacterium extorquens CM4 7114918 YP_002422650.1 CDS Mchl_3910 NC_011757.1 4107513 4107764 R KEGG: mex:Mext_3619 hypothetical protein; hypothetical protein complement(4107513..4107764) Methylobacterium extorquens CM4 7114919 YP_002422651.1 CDS Mchl_3911 NC_011757.1 4108069 4108473 R PFAM: 4-oxalocrotonate tautomerase; KEGG: mex:Mext_3620 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(4108069..4108473) Methylobacterium extorquens CM4 7114920 YP_002422652.1 CDS Mchl_3912 NC_011757.1 4108572 4109420 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3621 regulatory protein LysR; LysR family transcriptional regulator 4108572..4109420 Methylobacterium extorquens CM4 7114921 YP_002422653.1 CDS Mchl_3913 NC_011757.1 4109720 4109914 D KEGG: sus:acid_3821 CopG/Arc/MetJ family transcriptional regulator; CopG/Arc/MetJ family transcriptional regulator 4109720..4109914 Methylobacterium extorquens CM4 7114922 YP_002422654.1 CDS Mchl_3914 NC_011757.1 4109920 4111974 D TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; KEGG: mex:Mext_3622 PAS sensor protein; multi-sensor hybrid histidine kinase 4109920..4111974 Methylobacterium extorquens CM4 7114923 YP_002422655.1 CDS Mchl_3915 NC_011757.1 4112062 4112709 D PFAM: regulatory protein TetR; KEGG: mex:Mext_3623 regulatory protein TetR; TetR family transcriptional regulator 4112062..4112709 Methylobacterium extorquens CM4 7114924 YP_002422656.1 CDS Mchl_3916 NC_011757.1 4112734 4113327 D KEGG: mex:Mext_3624 hypothetical protein; hypothetical protein 4112734..4113327 Methylobacterium extorquens CM4 7114925 YP_002422657.1 CDS Mchl_3917 NC_011757.1 4113393 4114109 D KEGG: mex:Mext_3625 DNA-(apurinic or apyrimidinic site) lyase; PFAM: HhH-GPD family protein; SMART: iron-sulfur cluster loop; DNA-(apurinic or apyrimidinic site) lyase 4113393..4114109 Methylobacterium extorquens CM4 7114926 YP_002422658.1 CDS Mchl_3918 NC_011757.1 4114218 4115138 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3626 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4114218..4115138) Methylobacterium extorquens CM4 7114927 YP_002422659.1 CDS Mchl_3919 NC_011757.1 4115262 4115834 D PFAM: beta-Ig-H3/fasciclin; KEGG: mex:Mext_3627 beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin 4115262..4115834 Methylobacterium extorquens CM4 7114928 YP_002422660.1 CDS Mchl_3920 NC_011757.1 4116080 4116916 D PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3628 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4116080..4116916 Methylobacterium extorquens CM4 7114929 YP_002422661.1 CDS Mchl_3921 NC_011757.1 4116937 4117464 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mpo:Mpop_3911 glutathione-dependent formaldehyde-activating GFA; glutathione-dependent formaldehyde-activating protein complement(4116937..4117464) Methylobacterium extorquens CM4 7114930 YP_002422662.1 CDS Mchl_3922 NC_011757.1 4117831 4118349 D PFAM: GAF domain protein; KEGG: mex:Mext_3629 GAF domain-containing protein; GAF sensor protein 4117831..4118349 Methylobacterium extorquens CM4 7114931 YP_002422663.1 CDS Mchl_3923 NC_011757.1 4118410 4118628 D KEGG: mex:Mext_3630 hypothetical protein; hypothetical protein 4118410..4118628 Methylobacterium extorquens CM4 7114932 YP_002422664.1 CDS Mchl_3924 NC_011757.1 4118870 4119103 D KEGG: mpo:Mpop_3914 hypothetical protein; hypothetical protein 4118870..4119103 Methylobacterium extorquens CM4 7114933 YP_002422665.1 CDS Mchl_3925 NC_011757.1 4119108 4119356 D KEGG: mex:Mext_3632 hypothetical protein; hypothetical protein 4119108..4119356 Methylobacterium extorquens CM4 7114934 YP_002422666.1 CDS Mchl_3926 NC_011757.1 4119433 4120167 D TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3633 molybdate ABC transporter inner membrane subunit; molybdate ABC transporter inner membrane subunit 4119433..4120167 Methylobacterium extorquens CM4 7114935 YP_002422667.1 CDS Mchl_3927 NC_011757.1 4120937 4121593 R PFAM: glutathione S-transferase domain; KEGG: mex:Mext_3634 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein complement(4120937..4121593) Methylobacterium extorquens CM4 7114936 YP_002422668.1 CDS Mchl_3928 NC_011757.1 4121779 4122873 D KEGG: mex:Mext_3635 molybdate ABC transporter ATPase subunit; TIGRFAM: molybdate ABC transporter ATPase; PFAM: ABC transporter related; TOBE domain protein; SMART: ATPase AAA; molybdate ABC transporter ATPase 4121779..4122873 Methylobacterium extorquens CM4 7114937 YP_002422669.1 CDS Mchl_3929 NC_011757.1 4123437 4124141 D KEGG: mex:Mext_3637 hypothetical protein; hypothetical protein 4123437..4124141 Methylobacterium extorquens CM4 7117127 YP_002422670.1 CDS Mchl_3930 NC_011757.1 4124165 4125214 D KEGG: mex:Mext_3638 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 4124165..4125214 Methylobacterium extorquens CM4 7117128 YP_002422671.1 CDS ksgA NC_011757.1 4125223 4126113 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 4125223..4126113 Methylobacterium extorquens CM4 7117129 YP_002422672.1 CDS Mchl_3932 NC_011757.1 4126771 4127817 R KEGG: mex:Mext_3640 hypothetical protein; hypothetical protein complement(4126771..4127817) Methylobacterium extorquens CM4 7117130 YP_002422673.1 CDS Mchl_3933 NC_011757.1 4127814 4129085 R PFAM: glycosyl transferase family 2; chitin synthase; KEGG: mex:Mext_3641 glycosyl transferase; family 2 glycosyl transferase complement(4127814..4129085) Methylobacterium extorquens CM4 7117131 YP_002422674.1 CDS Mchl_3935 NC_011757.1 4129602 4130717 R PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3642 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(4129602..4130717) Methylobacterium extorquens CM4 7117133 YP_002422675.1 CDS Mchl_3936 NC_011757.1 4130883 4132388 R PFAM: sulfate transporter/antisigma-factor antagonist STAS; xanthine/uracil/vitamin C permease; sulfate transporter; KEGG: mex:Mext_3643 sulfate transporter; sulfate transporter complement(4130883..4132388) Methylobacterium extorquens CM4 7117134 YP_002422676.1 CDS Mchl_3937 NC_011757.1 4132567 4133283 R PFAM: LrgB family protein; KEGG: mex:Mext_3644 LrgB family protein; LrgB family protein complement(4132567..4133283) Methylobacterium extorquens CM4 7117135 YP_002422677.1 CDS Mchl_3938 NC_011757.1 4133280 4133666 R PFAM: LrgA family protein; KEGG: mex:Mext_3645 LrgA family protein; LrgA family protein complement(4133280..4133666) Methylobacterium extorquens CM4 7117136 YP_002422678.1 CDS Mchl_3939 NC_011757.1 4133804 4134280 R PFAM: protein of unknown function DUF1332; KEGG: mex:Mext_3646 hypothetical protein; hypothetical protein complement(4133804..4134280) Methylobacterium extorquens CM4 7117137 YP_002422679.1 CDS Mchl_3940 NC_011757.1 4134541 4135269 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_3647 methyltransferase type 11; type 11 methyltransferase complement(4134541..4135269) Methylobacterium extorquens CM4 7117138 YP_002422680.1 CDS Mchl_3941 NC_011757.1 4135297 4137927 R PFAM: OstA family protein; organic solvent tolerance protein; KEGG: mex:Mext_3648 organic solvent tolerance protein; organic solvent tolerance protein complement(4135297..4137927) Methylobacterium extorquens CM4 7117139 YP_002422681.1 CDS Mchl_3942 NC_011757.1 4137976 4139064 R PFAM: permease YjgP/YjgQ family protein; KEGG: mex:Mext_3649 permease YjgP/YjgQ family protein; permease YjgP/YjgQ family protein complement(4137976..4139064) Methylobacterium extorquens CM4 7117140 YP_002422682.1 CDS Mchl_3943 NC_011757.1 4139075 4140244 R PFAM: permease YjgP/YjgQ family protein; KEGG: mex:Mext_3650 permease YjgP/YjgQ family protein; permease YjgP/YjgQ family protein complement(4139075..4140244) Methylobacterium extorquens CM4 7117141 YP_002422683.1 CDS Mchl_3944 NC_011757.1 4140536 4142029 D PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: mex:Mext_3651 leucyl aminopeptidase; leucyl aminopeptidase 4140536..4142029 Methylobacterium extorquens CM4 7117142 YP_002422684.1 CDS Mchl_3945 NC_011757.1 4142026 4142826 D KEGG: mex:Mext_3652 hypothetical protein; hypothetical protein 4142026..4142826 Methylobacterium extorquens CM4 7117143 YP_002422685.1 CDS Mchl_3946 NC_011757.1 4142926 4144662 D PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_3653 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 4142926..4144662 Methylobacterium extorquens CM4 7117144 YP_002422686.1 CDS Mchl_3947 NC_011757.1 4145126 4146307 D PFAM: MscS Mechanosensitive ion channel; KEGG: mex:Mext_3654 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 4145126..4146307 Methylobacterium extorquens CM4 7117145 YP_002422687.1 CDS Mchl_3948 NC_011757.1 4146373 4147152 R PFAM: DSBA oxidoreductase; KEGG: mex:Mext_3655 DsbA oxidoreductase; DSBA oxidoreductase complement(4146373..4147152) Methylobacterium extorquens CM4 7117146 YP_002422688.1 CDS Mchl_3949 NC_011757.1 4147450 4148493 D KEGG: mex:Mext_3656 metal dependent phophohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 4147450..4148493 Methylobacterium extorquens CM4 7117147 YP_002422689.1 CDS Mchl_3950 NC_011757.1 4148592 4149932 D PFAM: phosphate-selective porin O and P; KEGG: mex:Mext_3657 phosphate-selective porin O and P; phosphate-selective porin O and P 4148592..4149932 Methylobacterium extorquens CM4 7117148 YP_002422690.1 CDS Mchl_3951 NC_011757.1 4150011 4151174 D PFAM: aminotransferase class I and II; KEGG: mex:Mext_3658 aminotransferase class I and II; class I and II aminotransferase 4150011..4151174 Methylobacterium extorquens CM4 7117149 YP_002422691.1 CDS Mchl_3952 NC_011757.1 4151377 4154517 R TIGRFAM: ribonuclease, Rne/Rng family; PFAM: ribonuclease E and G; KEGG: mex:Mext_3659 ribonuclease; Rne/Rng family ribonuclease complement(4151377..4154517) Methylobacterium extorquens CM4 7117150 YP_002422692.1 CDS Mchl_3953 NC_011757.1 4155204 4155389 D KEGG: mex:Mext_3660 hypothetical protein; hypothetical protein 4155204..4155389 Methylobacterium extorquens CM4 7117151 YP_002422693.1 CDS Mchl_3954 NC_011757.1 4155582 4156913 D PFAM: cell wall hydrolase/autolysin; KEGG: mex:Mext_3661 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 4155582..4156913 Methylobacterium extorquens CM4 7117152 YP_002422694.1 CDS Mchl_3955 NC_011757.1 4157240 4159657 D KEGG: mex:Mext_3662 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein, 1A family 4157240..4159657 Methylobacterium extorquens CM4 7117153 YP_002422695.1 CDS Mchl_3956 NC_011757.1 4159950 4161062 D PFAM: monooxygenase; KEGG: mex:Mext_3663 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 4159950..4161062 Methylobacterium extorquens CM4 7117154 YP_002422696.1 CDS Mchl_3957 NC_011757.1 4161248 4162507 D PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3664 acyl-CoA dehydrogenase type 2; acyl-CoA dehydrogenase type 2 domain-containing protein 4161248..4162507 Methylobacterium extorquens CM4 7117155 YP_002422697.1 CDS Mchl_3958 NC_011757.1 4162666 4163316 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_3665 2Fe-2S iron-sulfur cluster binding domain-containing protein; (2Fe-2S)-binding domain-containing protein 4162666..4163316 Methylobacterium extorquens CM4 7117156 YP_002422698.1 CDS Mchl_3959 NC_011757.1 4163330 4164304 D PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mex:Mext_3666 molybdopterin dehydrogenase FAD-binding; FAD-binding molybdopterin dehydrogenase 4163330..4164304 Methylobacterium extorquens CM4 7117157 YP_002422699.1 CDS Mchl_3960 NC_011757.1 4164316 4166553 D PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_3667 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 4164316..4166553 Methylobacterium extorquens CM4 7117158 YP_002422700.1 CDS Mchl_3961 NC_011757.1 4166679 4166933 D KEGG: mex:Mext_3668 hypothetical protein; hypothetical protein 4166679..4166933 Methylobacterium extorquens CM4 7117159 YP_002422701.1 CDS Mchl_3962 NC_011757.1 4167043 4168383 D PFAM: xanthine/uracil/vitamin C permease; KEGG: mex:Mext_3669 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 4167043..4168383 Methylobacterium extorquens CM4 7117160 YP_002422702.1 CDS Mchl_3963 NC_011757.1 4168527 4168718 D KEGG: mpo:Mpop_3957 hypothetical protein; hypothetical protein 4168527..4168718 Methylobacterium extorquens CM4 7117161 YP_002422703.1 CDS Mchl_3964 NC_011757.1 4168707 4169738 R PFAM: monooxygenase; KEGG: mex:Mext_3670 luciferase family protein; monooxygenase complement(4168707..4169738) Methylobacterium extorquens CM4 7117162 YP_002422704.1 CDS Mchl_3965 NC_011757.1 4170331 4170555 D KEGG: mex:Mext_3671 hypothetical protein; hypothetical protein 4170331..4170555 Methylobacterium extorquens CM4 7117163 YP_002422705.1 CDS Mchl_3966 NC_011757.1 4171023 4171229 R KEGG: mpo:Mpop_0104 hypothetical protein; hypothetical protein complement(4171023..4171229) Methylobacterium extorquens CM4 7117164 YP_002422706.1 CDS Mchl_3968 NC_011757.1 4172136 4173305 R KEGG: mex:Mext_3673 DHH superfamily phosphohydrolase; DHH superfamily phosphohydrolase complement(4172136..4173305) Methylobacterium extorquens CM4 7117166 YP_002422707.1 CDS mdoG NC_011757.1 4173719 4175365 D involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 4173719..4175365 Methylobacterium extorquens CM4 7117167 YP_002422708.1 CDS Mchl_3970 NC_011757.1 4175417 4177591 D necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 4175417..4177591 Methylobacterium extorquens CM4 7117168 YP_002422709.1 CDS Mchl_3974 NC_011757.1 4179371 4180933 D PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: atu:Atu5094 ISL3 family transposase; transposase IS204/IS1001/IS1096/IS1165 family protein 4179371..4180933 Methylobacterium extorquens CM4 7117173 YP_002422710.1 CDS Mchl_3977 NC_011757.1 4182435 4183490 R KEGG: csc:Csac_0779 GDSL family lipase; hypothetical protein complement(4182435..4183490) Methylobacterium extorquens CM4 7117176 YP_002422711.1 CDS Mchl_3978 NC_011757.1 4183594 4184628 R PFAM: oxidoreductase domain protein; KEGG: scl:sce7613 oxidoreductase; oxidoreductase domain-containing protein complement(4183594..4184628) Methylobacterium extorquens CM4 7117177 YP_002422712.1 CDS Mchl_3979 NC_011757.1 4184792 4185874 D PFAM: CBS domain containing protein; nucleotidyl transferase; KEGG: sru:SRU_0607 mannose-1-phosphate guanyltransferase; nucleotidyl transferase 4184792..4185874 Methylobacterium extorquens CM4 7117178 YP_002422713.1 CDS Mchl_3980 NC_011757.1 4185921 4186973 D PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: mag:amb0080 sialic acid synthase; N-acylneuraminate-9-phosphate synthase 4185921..4186973 Methylobacterium extorquens CM4 7117179 YP_002422714.1 CDS Mchl_3981 NC_011757.1 4186973 4187650 D KEGG: ajs:Ajs_0546 hypothetical protein; hypothetical protein 4186973..4187650 Methylobacterium extorquens CM4 7117180 YP_002422715.1 CDS Mchl_3982 NC_011757.1 4187656 4188840 D PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: cvi:CV_4033 N-acetylglucosamine-6-phosphate 2-epimerase/N-acetylglucosamine-6-phosphatase; UDP-N-acetylglucosamine 2-epimerase 4187656..4188840 Methylobacterium extorquens CM4 7117181 YP_002422716.1 CDS Mchl_3983 NC_011757.1 4188837 4189958 D KEGG: mca:MCA2548 hypothetical protein; hypothetical protein 4188837..4189958 Methylobacterium extorquens CM4 7117182 YP_002422717.1 CDS Mchl_3984 NC_011757.1 4189972 4190940 D PFAM: polysaccharide deacetylase; KEGG: mgm:Mmc1_0148 polysaccharide deacetylase; polysaccharide deacetylase 4189972..4190940 Methylobacterium extorquens CM4 7117183 YP_002422718.1 CDS Mchl_3985 NC_011757.1 4190930 4192168 D PFAM: polysaccharide biosynthesis protein CapD; KEGG: bfr:BF1430 nucleoside-diphosphate sugar epimerase; polysaccharide biosynthesis protein CapD 4190930..4192168 Methylobacterium extorquens CM4 7117184 YP_002422719.1 CDS Mchl_3986 NC_011757.1 4192204 4193355 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mag:amb0078 pyridoxal phosphate-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase 4192204..4193355 Methylobacterium extorquens CM4 7117185 YP_002422720.1 CDS Mchl_3987 NC_011757.1 4193481 4195124 D hypothetical protein 4193481..4195124 Methylobacterium extorquens CM4 7117186 YP_002422721.1 CDS Mchl_3988 NC_011757.1 4195163 4196086 D PFAM: oxidoreductase domain protein; KEGG: dau:Daud_0025 oxidoreductase domain protein; oxidoreductase domain-containing protein 4195163..4196086 Methylobacterium extorquens CM4 7117187 YP_002422722.1 CDS Mchl_3989 NC_011757.1 4196062 4197534 D KEGG: gbe:GbCGDNIH1_2152 glycosyltransferase; hypothetical protein 4196062..4197534 Methylobacterium extorquens CM4 7117188 YP_002422723.1 CDS Mchl_3990 NC_011757.1 4197589 4198320 D PFAM: acylneuraminate cytidylyltransferase; KEGG: bja:blr5996 posttranslational modification protein; N-acylneuraminate cytidylyltransferase 4197589..4198320 Methylobacterium extorquens CM4 7117189 YP_002422724.1 CDS Mchl_3991 NC_011757.1 4198674 4200269 D hypothetical protein 4198674..4200269 Methylobacterium extorquens CM4 7117190 YP_002422725.1 CDS Mchl_3992 NC_011757.1 4200604 4204557 D PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_A3797 hypothetical protein; family 2 glycosyl transferase 4200604..4204557 Methylobacterium extorquens CM4 7117191 YP_002422726.1 CDS Mchl_3993 NC_011757.1 4204571 4205491 D KEGG: mlo:mll8033 hypothetical protein; hypothetical protein 4204571..4205491 Methylobacterium extorquens CM4 7117192 YP_002422727.1 CDS Mchl_3994 NC_011757.1 4205794 4206837 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: oan:Oant_4496 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein complement(4205794..4206837) Methylobacterium extorquens CM4 7117193 YP_002422728.1 CDS Mchl_3995 NC_011757.1 4207024 4207779 D PFAM: integrase catalytic region; KEGG: mex:Mext_3531 integrase catalytic region; integrase catalytic subunit 4207024..4207779 Methylobacterium extorquens CM4 7117194 YP_002422729.1 CDS Mchl_3996 NC_011757.1 4207815 4208438 R KEGG: mex:Mext_2439 hypothetical protein; hypothetical protein complement(4207815..4208438) Methylobacterium extorquens CM4 7117195 YP_002422730.1 CDS Mchl_3997 NC_011757.1 4208435 4208995 R KEGG: mex:Mext_2440 hypothetical protein; hypothetical protein complement(4208435..4208995) Methylobacterium extorquens CM4 7117196 YP_002422731.1 CDS Mchl_3998 NC_011757.1 4209182 4209937 D KEGG: mem:Memar_0194 hypothetical protein; hypothetical protein 4209182..4209937 Methylobacterium extorquens CM4 7117197 YP_002422732.1 CDS Mchl_4000 NC_011757.1 4211006 4211671 R KEGG: fal:FRAAL1676 modular polyketide synthase; hypothetical protein complement(4211006..4211671) Methylobacterium extorquens CM4 7117199 YP_002422733.1 CDS Mchl_4001 NC_011757.1 4211749 4212633 R TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase; KEGG: mex:Mext_2395 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase complement(4211749..4212633) Methylobacterium extorquens CM4 7117200 YP_002422734.1 CDS Mchl_4002 NC_011757.1 4212650 4213540 R PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3692 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(4212650..4213540) Methylobacterium extorquens CM4 7117201 YP_002422735.1 CDS Mchl_4003 NC_011757.1 4213543 4214601 R TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3691 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(4213543..4214601) Methylobacterium extorquens CM4 7117202 YP_002422736.1 CDS Mchl_4004 NC_011757.1 4214735 4215289 R KEGG: mex:Mext_3690 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(4214735..4215289) Methylobacterium extorquens CM4 7117203 YP_002422737.1 CDS Mchl_4005 NC_011757.1 4215645 4218017 D PFAM: glycosyl transferase family 2; KEGG: bpy:Bphyt_0883 glycosyl transferase family 2; family 2 glycosyl transferase 4215645..4218017 Methylobacterium extorquens CM4 7117204 YP_002422738.1 CDS Mchl_4010 NC_011757.1 4220468 4220650 D KEGG: mex:Mext_3718 hypothetical protein; hypothetical protein 4220468..4220650 Methylobacterium extorquens CM4 7114361 YP_002422739.1 CDS Mchl_4011 NC_011757.1 4220894 4221109 D KEGG: mrd:Mrad2831_4949 hypothetical protein; hypothetical protein 4220894..4221109 Methylobacterium extorquens CM4 7118016 YP_002422740.1 CDS Mchl_4012 NC_011757.1 4221433 4221960 D KEGG: mex:Mext_3719 hypothetical protein; hypothetical protein 4221433..4221960 Methylobacterium extorquens CM4 7118017 YP_002422741.1 CDS Mchl_4013 NC_011757.1 4222006 4222227 R KEGG: mex:Mext_3720 hypothetical protein; hypothetical protein complement(4222006..4222227) Methylobacterium extorquens CM4 7118018 YP_002422742.1 CDS Mchl_4014 NC_011757.1 4222450 4222665 R KEGG: mrd:Mrad2831_4166 hypothetical protein; hypothetical protein complement(4222450..4222665) Methylobacterium extorquens CM4 7118019 YP_002422743.1 CDS Mchl_4015 NC_011757.1 4222789 4224624 R catalyzes the hydrolysis of allophanate; allophanate hydrolase complement(4222789..4224624) Methylobacterium extorquens CM4 7118020 YP_002422744.1 CDS Mchl_4016 NC_011757.1 4224732 4224851 R hypothetical protein complement(4224732..4224851) Methylobacterium extorquens CM4 7118021 YP_002422745.1 CDS Mchl_4017 NC_011757.1 4224935 4228465 R KEGG: mex:Mext_3722 UreA carboxylase; TIGRFAM: urea amidolyase related protein; urea carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; allophanate hydrolase subunit 2; carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; SMART: allophanate hydrolase subunit 1; urea carboxylase complement(4224935..4228465) Methylobacterium extorquens CM4 7118022 YP_002422746.1 CDS Mchl_4018 NC_011757.1 4228470 4229090 R TIGRFAM: urea carboxylase-associated protein 1; KEGG: mex:Mext_3723 hypothetical protein; urea carboxylase-associated protein 1 complement(4228470..4229090) Methylobacterium extorquens CM4 7118023 YP_002422747.1 CDS Mchl_4019 NC_011757.1 4229105 4229914 R TIGRFAM: urea carboxylase-associated protein 2; KEGG: mex:Mext_3724 hypothetical protein; urea carboxylase-associated protein 2 complement(4229105..4229914) Methylobacterium extorquens CM4 7118024 YP_002422748.1 CDS Mchl_4020 NC_011757.1 4230140 4230511 R PFAM: protein of unknown function DUF861 cupin_3; KEGG: mex:Mext_3725 protein of unknown function DUF861 cupin_3; hypothetical protein complement(4230140..4230511) Methylobacterium extorquens CM4 7118025 YP_002422749.1 CDS Mchl_4021 NC_011757.1 4230524 4231897 R TIGRFAM: glutamine synthetaseII; PFAM: glutamine synthetase catalytic region; KEGG: mex:Mext_3726 glutamine synthetase, type III; glutamine synthetaseII complement(4230524..4231897) Methylobacterium extorquens CM4 7118026 YP_002422750.1 CDS Mchl_4022 NC_011757.1 4231899 4232699 R PFAM: creatininase; KEGG: mex:Mext_3727 creatininase; creatininase complement(4231899..4232699) Methylobacterium extorquens CM4 7118027 YP_002422751.1 CDS Mchl_4023 NC_011757.1 4232696 4233646 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3728 ABC transporter; ABC transporter complement(4232696..4233646) Methylobacterium extorquens CM4 7118028 YP_002422752.1 CDS Mchl_4024 NC_011757.1 4233643 4234704 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3729 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(4233643..4234704) Methylobacterium extorquens CM4 7118029 YP_002422753.1 CDS Mchl_4025 NC_011757.1 4234715 4235725 R KEGG: mex:Mext_3730 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein complement(4234715..4235725) Methylobacterium extorquens CM4 7118030 YP_002422754.1 CDS Mchl_4026 NC_011757.1 4236727 4238055 D KEGG: mex:Mext_3731 glycine betaine/L-proline ABC transporter ATPase; TIGRFAM: glycine betaine/L-proline ABC transporter ATPase; PFAM: CBS domain containing protein; ABC transporter related; SMART: ATPase AAA; glycine betaine/L-proline ABC transporter ATPase subunit 4236727..4238055 Methylobacterium extorquens CM4 7118031 YP_002422755.1 CDS Mchl_4027 NC_011757.1 4237971 4238822 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3732 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 4237971..4238822 Methylobacterium extorquens CM4 7118032 YP_002422756.1 CDS Mchl_4028 NC_011757.1 4239008 4239844 D PFAM: substrate-binding region of ABC-type glycine betaine transporter; KEGG: mex:Mext_3733 substrate-binding region of ABC-type glycine betaine transporter; glycine betaine ABC transporter substrate-binding protein 4239008..4239844 Methylobacterium extorquens CM4 7118033 YP_002422757.1 CDS Mchl_4029 NC_011757.1 4239925 4241274 D KEGG: mex:Mext_3734 signal peptide; signal peptide 4239925..4241274 Methylobacterium extorquens CM4 7118034 YP_002422758.1 CDS Mchl_4030 NC_011757.1 4241468 4242499 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: mex:Mext_3735 helix-turn-helix domain-containing protein; AraC family transcriptional regulator complement(4241468..4242499) Methylobacterium extorquens CM4 7118035 YP_002422759.1 CDS Mchl_4031 NC_011757.1 4242936 4244189 D TIGRFAM: sarcosine oxidase subunit beta family; PFAM: FAD dependent oxidoreductase; KEGG: mex:Mext_3736 sarcosine oxidase subunit beta family protein; sarcosine oxidase subunit beta family 4242936..4244189 Methylobacterium extorquens CM4 7118036 YP_002422760.1 CDS Mchl_4032 NC_011757.1 4244209 4244505 D TIGRFAM: sarcosine oxidase subunit delta family; PFAM: sarcosine oxidase subunit delta heterotetrameric; KEGG: mex:Mext_3737 sarcosine oxidase subunit delta family protein; sarcosine oxidase subunit delta family 4244209..4244505 Methylobacterium extorquens CM4 7118037 YP_002422761.1 CDS Mchl_4033 NC_011757.1 4244507 4247494 D TIGRFAM: sarcosine oxidase subunit alpha family; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel; KEGG: mex:Mext_3738 sarcosine oxidase subunit alpha family protein; sarcosine oxidase subunit alpha family 4244507..4247494 Methylobacterium extorquens CM4 7118038 YP_002422762.1 CDS Mchl_4034 NC_011757.1 4247487 4248077 D PFAM: sarcosine oxidase subunit gamma; KEGG: mex:Mext_3739 sarcosine oxidase subunit gamma; sarcosine oxidase subunit gamma 4247487..4248077 Methylobacterium extorquens CM4 7118039 YP_002422763.1 CDS Mchl_4035 NC_011757.1 4248220 4249581 D KEGG: mex:Mext_3740 L-serine dehydratase; TIGRFAM: L-serine dehydratase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 4248220..4249581 Methylobacterium extorquens CM4 7118040 YP_002422764.1 CDS Mchl_4036 NC_011757.1 4250009 4250230 D KEGG: mex:Mext_3741 hypothetical protein; hypothetical protein 4250009..4250230 Methylobacterium extorquens CM4 7118041 YP_002422765.1 CDS Mchl_4037 NC_011757.1 4250530 4251039 R PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: mex:Mext_3742 YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated protein complement(4250530..4251039) Methylobacterium extorquens CM4 7118042 YP_002422766.1 CDS Mchl_4038 NC_011757.1 4251053 4251847 R PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: mex:Mext_3743 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein alpha/beta-subunit complement(4251053..4251847) Methylobacterium extorquens CM4 7118043 YP_002422767.1 CDS Mchl_4039 NC_011757.1 4251844 4253064 R PFAM: electron transfer flavoprotein alpha/beta-subunit ; electron transfer flavoprotein subunit alpha; KEGG: mex:Mext_3744 electron transfer flavoprotein subunit alpha; electron transfer flavoprotein subunit alpha complement(4251844..4253064) Methylobacterium extorquens CM4 7118044 YP_002422768.1 CDS Mchl_4040 NC_011757.1 4253061 4254962 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mex:Mext_3745 hypothetical protein; hypothetical protein complement(4253061..4254962) Methylobacterium extorquens CM4 7118045 YP_002422769.1 CDS Mchl_4041 NC_011757.1 4255225 4257267 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_3746 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase/NADH oxidase complement(4255225..4257267) Methylobacterium extorquens CM4 7118046 YP_002422770.1 CDS Mchl_4042 NC_011757.1 4257330 4258457 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: mex:Mext_3747 oxidoreductase FAD-binding subunit; oxidoreductase FAD-binding domain-containing protein complement(4257330..4258457) Methylobacterium extorquens CM4 7118047 YP_002422771.1 CDS Mchl_4043 NC_011757.1 4258461 4259720 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: mex:Mext_3748 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein complement(4258461..4259720) Methylobacterium extorquens CM4 7118048 YP_002422772.1 CDS Mchl_4044 NC_011757.1 4259845 4260651 R TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: mex:Mext_3749 histidinol-phosphate phosphatase; histidinol-phosphate phosphatase complement(4259845..4260651) Methylobacterium extorquens CM4 7118049 YP_002422773.1 CDS Mchl_4045 NC_011757.1 4260655 4261590 R PFAM: choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: mex:Mext_3750 choline/ethanolamine kinase; choline/ethanolamine kinase complement(4260655..4261590) Methylobacterium extorquens CM4 7118050 YP_002422774.1 CDS Mchl_4046 NC_011757.1 4261811 4262791 R PFAM: aminoglycoside phosphotransferase; KEGG: mex:Mext_3751 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(4261811..4262791) Methylobacterium extorquens CM4 7118051 YP_002422775.1 CDS Mchl_4047 NC_011757.1 4262788 4264089 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(4262788..4264089) Methylobacterium extorquens CM4 7118052 YP_002422776.1 CDS Mchl_4048 NC_011757.1 4264113 4265951 R KEGG: mex:Mext_3753 oligopeptide/dipeptide ABC transporter ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA; oligopeptide/dipeptide ABC transporter ATPase complement(4264113..4265951) Methylobacterium extorquens CM4 7118053 YP_002422777.1 CDS Mchl_4049 NC_011757.1 4265951 4266874 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3754 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(4265951..4266874) Methylobacterium extorquens CM4 7118054 YP_002422778.1 CDS Mchl_4050 NC_011757.1 4266874 4267854 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3755 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(4266874..4267854) Methylobacterium extorquens CM4 7118055 YP_002422779.1 CDS Mchl_4051 NC_011757.1 4267947 4269518 R PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_3756 extracellular solute-binding protein; family 5 extracellular solute-binding protein complement(4267947..4269518) Methylobacterium extorquens CM4 7118056 YP_002422780.1 CDS Mchl_4052 NC_011757.1 4269852 4272371 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: mex:Mext_3757 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(4269852..4272371) Methylobacterium extorquens CM4 7118057 YP_002422781.1 CDS Mchl_4053 NC_011757.1 4272542 4273516 R PFAM: FecR protein; KEGG: mex:Mext_3758 FecR protein; anti-FecI sigma factor FecR complement(4272542..4273516) Methylobacterium extorquens CM4 7118058 YP_002422782.1 CDS Mchl_4054 NC_011757.1 4273614 4274156 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_3759 sigma-70 family RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit complement(4273614..4274156) Methylobacterium extorquens CM4 7118059 YP_002422783.1 CDS Mchl_4055 NC_011757.1 4275014 4276798 D PFAM: IucA/IucC family protein; KEGG: mex:Mext_3760 IucA/IucC family protein; IucA/IucC family protein 4275014..4276798 Methylobacterium extorquens CM4 7118060 YP_002422784.1 CDS Mchl_4056 NC_011757.1 4276782 4279778 D PFAM: AMP-dependent synthetase and ligase; IucA/IucC family protein; KEGG: mex:Mext_3761 IucA/IucC family protein; IucA/IucC family protein 4276782..4279778 Methylobacterium extorquens CM4 7118061 YP_002422785.1 CDS Mchl_4057 NC_011757.1 4279775 4281076 D KEGG: mex:Mext_3762 hypothetical protein; hypothetical protein 4279775..4281076 Methylobacterium extorquens CM4 7118062 YP_002422786.1 CDS Mchl_4058 NC_011757.1 4281073 4281909 D PFAM: xylose isomerase; KEGG: mex:Mext_3763 xylose isomerase domain-containing protein; xylose isomerase 4281073..4281909 Methylobacterium extorquens CM4 7118063 YP_002422787.1 CDS Mchl_4059 NC_011757.1 4281938 4282216 D KEGG: mex:Mext_3764 hypothetical protein; hypothetical protein 4281938..4282216 Methylobacterium extorquens CM4 7114363 YP_002422788.1 CDS Mchl_4060 NC_011757.1 4282520 4283020 D PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_3765 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 4282520..4283020 Methylobacterium extorquens CM4 7114366 YP_002422789.1 CDS Mchl_4061 NC_011757.1 4283188 4283865 D KEGG: mex:Mext_3766 hypothetical protein; hypothetical protein 4283188..4283865 Methylobacterium extorquens CM4 7114367 YP_002422790.1 CDS Mchl_4062 NC_011757.1 4283965 4284738 R KEGG: mex:Mext_3768 TetR family transcriptional regulator; TetR family transcriptional regulator complement(4283965..4284738) Methylobacterium extorquens CM4 7114368 YP_002422791.1 CDS Mchl_4063 NC_011757.1 4284809 4285642 R KEGG: mex:Mext_3769 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase complement(4284809..4285642) Methylobacterium extorquens CM4 7114369 YP_002422792.1 CDS Mchl_4064 NC_011757.1 4285724 4286230 R PFAM: protein of unknown function DUF1790; KEGG: mex:Mext_3770 hypothetical protein; hypothetical protein complement(4285724..4286230) Methylobacterium extorquens CM4 7114370 YP_002422793.1 CDS Mchl_4065 NC_011757.1 4286547 4286828 R PFAM: protein of unknown function DUF526; KEGG: mex:Mext_3771 hypothetical protein; hypothetical protein complement(4286547..4286828) Methylobacterium extorquens CM4 7114371 YP_002422794.1 CDS Mchl_4066 NC_011757.1 4287071 4287796 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_3772 response regulator receiver; transcriptional regulator 4287071..4287796 Methylobacterium extorquens CM4 7114372 YP_002422795.1 CDS Mchl_4067 NC_011757.1 4287793 4289268 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_3773 ATPase domain-containing protein; histidine kinase 4287793..4289268 Methylobacterium extorquens CM4 7114373 YP_002422796.1 CDS Mchl_4068 NC_011757.1 4289469 4290641 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_3774 diguanylate cyclase; diguanylate cyclase 4289469..4290641 Methylobacterium extorquens CM4 7114374 YP_002422797.1 CDS Mchl_4069 NC_011757.1 4290770 4291426 R KEGG: mex:Mext_3775 glutathione-S-transferase protein; glutathione-S-transferase protein complement(4290770..4291426) Methylobacterium extorquens CM4 7114375 YP_002422798.1 CDS Mchl_4070 NC_011757.1 4291777 4292991 D TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mex:Mext_3776 polyhydroxyalkanoate depolymerase, intracellular; polyhydroxyalkanoate depolymerase, intracellular 4291777..4292991 Methylobacterium extorquens CM4 7114376 YP_002422799.1 CDS rpsU NC_011757.1 4293426 4293743 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 4293426..4293743 Methylobacterium extorquens CM4 7114377 YP_002422800.1 CDS Mchl_4072 NC_011757.1 4293844 4294233 R PFAM: response regulator receiver; KEGG: mex:Mext_3778 response regulator receiver; response regulator receiver protein complement(4293844..4294233) Methylobacterium extorquens CM4 7114378 YP_002422801.1 CDS Mchl_4073 NC_011757.1 4294513 4295298 D PFAM: glutamine amidotransferase class-II; KEGG: mex:Mext_3779 glutamine amidotransferase class-II; class II glutamine amidotransferase 4294513..4295298 Methylobacterium extorquens CM4 7114379 YP_002422802.1 CDS Mchl_4074 NC_011757.1 4295449 4296240 D PFAM: protein of unknown function DUF81; KEGG: mex:Mext_3780 hypothetical protein; hypothetical protein 4295449..4296240 Methylobacterium extorquens CM4 7114380 YP_002422803.1 CDS Mchl_4075 NC_011757.1 4296269 4297315 R PFAM: MaoC domain protein dehydratase; KEGG: mex:Mext_3781 dehydratase; MaoC domain-containing protein dehydratase complement(4296269..4297315) Methylobacterium extorquens CM4 7114381 YP_002422804.1 CDS Mchl_4076 NC_011757.1 4297511 4297801 R PFAM: protein of unknown function YGGT; KEGG: mex:Mext_3782 protein of unknown function YGGT; hypothetical protein complement(4297511..4297801) Methylobacterium extorquens CM4 7114382 YP_002422805.1 CDS Mchl_4077 NC_011757.1 4298338 4298835 D KEGG: mrd:Mrad2831_0261 GTP diphosphokinase; GTP diphosphokinase 4298338..4298835 Methylobacterium extorquens CM4 7114384 YP_002422806.1 CDS Mchl_4079 NC_011757.1 4299352 4300173 D hypothetical protein 4299352..4300173 Methylobacterium extorquens CM4 7114386 YP_002422807.1 CDS Mchl_4080 NC_011757.1 4300326 4300658 R KEGG: mex:Mext_0184 hypothetical protein; hypothetical protein complement(4300326..4300658) Methylobacterium extorquens CM4 7114387 YP_002422808.1 CDS Mchl_4081 NC_011757.1 4300666 4300899 R KEGG: mpo:Mpop_2918 hypothetical protein; hypothetical protein complement(4300666..4300899) Methylobacterium extorquens CM4 7114388 YP_002422809.1 CDS Mchl_4082 NC_011757.1 4301007 4301792 R PFAM: Gp37Gp68 family protein; KEGG: bra:BRADO0295 phage protein GP37/Gp68; Gp37Gp68 family protein complement(4301007..4301792) Methylobacterium extorquens CM4 7114389 YP_002422810.1 CDS Mchl_4083 NC_011757.1 4301804 4302907 R KEGG: nha:Nham_0599 hypothetical protein; hypothetical protein complement(4301804..4302907) Methylobacterium extorquens CM4 7114390 YP_002422811.1 CDS Mchl_4084 NC_011757.1 4303078 4303602 R KEGG: mpo:Mpop_2387 hypothetical protein; hypothetical protein complement(4303078..4303602) Methylobacterium extorquens CM4 7114391 YP_002422812.1 CDS Mchl_4085 NC_011757.1 4303595 4304056 R PFAM: ribonuclease H; KEGG: pmy:Pmen_2066 ribonuclease H; ribonuclease H complement(4303595..4304056) Methylobacterium extorquens CM4 7114392 YP_002422813.1 CDS Mchl_4086 NC_011757.1 4304134 4308228 R PFAM: transglycosylase; KEGG: ppu:PP_2287 phage internal core protein; transglycosylase complement(4304134..4308228) Methylobacterium extorquens CM4 7114393 YP_002422814.1 CDS Mchl_4087 NC_011757.1 4308351 4309079 R KEGG: sme:SMc02328 hypothetical unknown protein; hypothetical protein complement(4308351..4309079) Methylobacterium extorquens CM4 7114394 YP_002422815.1 CDS Mchl_4088 NC_011757.1 4309571 4310356 D KEGG: cti:RALTA_B0264 hypothetical protein; hypothetical protein 4309571..4310356 Methylobacterium extorquens CM4 7114395 YP_002422816.1 CDS Mchl_4090 NC_011757.1 4310710 4310952 R KEGG: mrd:Mrad2831_2237 hypothetical protein; hypothetical protein complement(4310710..4310952) Methylobacterium extorquens CM4 7114397 YP_002422817.1 CDS Mchl_4091 NC_011757.1 4311213 4311773 R PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: mrd:Mrad2831_6517 resolvase domain-containing protein; Resolvase domain complement(4311213..4311773) Methylobacterium extorquens CM4 7114398 YP_002422818.1 CDS Mchl_4092 NC_011757.1 4312114 4312599 D KEGG: mpo:Mpop_0095 response regulator receiver protein; response regulator receiver protein 4312114..4312599 Methylobacterium extorquens CM4 7114399 YP_002422819.1 CDS Mchl_4093 NC_011757.1 4312766 4313050 D KEGG: mrd:Mrad2831_1399 lipoprotein; lipoprotein 4312766..4313050 Methylobacterium extorquens CM4 7114400 YP_002422820.1 CDS Mchl_4094 NC_011757.1 4313347 4313865 D PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: mex:Mext_3719 hypothetical protein; HMG-I and HMG-Y DNA-binding domain-containing protein 4313347..4313865 Methylobacterium extorquens CM4 7114401 YP_002422821.1 CDS Mchl_4095 NC_011757.1 4314317 4314640 R KEGG: mex:Mext_3720 hypothetical protein; hypothetical protein complement(4314317..4314640) Methylobacterium extorquens CM4 7114402 YP_002422822.1 CDS Mchl_4096 NC_011757.1 4316900 4317082 D KEGG: mex:Mext_3718 hypothetical protein; hypothetical protein 4316900..4317082 Methylobacterium extorquens CM4 7114403 YP_002422823.1 CDS Mchl_4097 NC_011757.1 4317113 4318507 R PFAM: integrase family protein; KEGG: mpo:Mpop_2395 integrase family protein; integrase family protein complement(4317113..4318507) Methylobacterium extorquens CM4 7114404 YP_002422824.1 CDS Mchl_4098 NC_011757.1 4318726 4320495 D PFAM: integrase family protein; KEGG: rsp:RSP_2361 integrase/resolvase recombinase protein phage-related integrase; integrase family protein 4318726..4320495 Methylobacterium extorquens CM4 7114405 YP_002422825.1 CDS Mchl_4099 NC_011757.1 4320542 4321582 D KEGG: shl:Shal_4055 hypothetical protein; hypothetical protein 4320542..4321582 Methylobacterium extorquens CM4 7114406 YP_002422826.1 CDS Mchl_4100 NC_011757.1 4323013 4323855 D PFAM: protein of unknown function DUF344; KEGG: mex:Mext_1138 hypothetical protein; hypothetical protein 4323013..4323855 Methylobacterium extorquens CM4 7114407 YP_002422827.1 CDS Mchl_4101 NC_011757.1 4323907 4324224 D KEGG: mex:Mext_1135 hypothetical protein; hypothetical protein 4323907..4324224 Methylobacterium extorquens CM4 7114408 YP_002422828.1 CDS Mchl_4103 NC_011757.1 4324920 4326575 D PFAM: sulfate transporter/antisigma-factor antagonist STAS; xanthine/uracil/vitamin C permease; sulfate transporter; KEGG: mex:Mext_0049 sulfate transporter; sulfate transporter 4324920..4326575 Methylobacterium extorquens CM4 7114410 YP_002422829.1 CDS Mchl_4104 NC_011757.1 4327088 4327453 R KEGG: mex:Mext_4255 hypothetical protein; hypothetical protein complement(4327088..4327453) Methylobacterium extorquens CM4 7114411 YP_002422830.1 CDS Mchl_4105 NC_011757.1 4328340 4329512 D PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: met:M446_0110 alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 4328340..4329512 Methylobacterium extorquens CM4 7114412 YP_002422831.1 CDS Mchl_4106 NC_011757.1 4329584 4330189 D KEGG: met:M446_0111 hypothetical protein; hypothetical protein 4329584..4330189 Methylobacterium extorquens CM4 7114413 YP_002422832.1 CDS Mchl_4107 NC_011757.1 4330212 4331309 D KEGG: met:M446_0112 hypothetical protein; hypothetical protein 4330212..4331309 Methylobacterium extorquens CM4 7114414 YP_002422833.1 CDS Mchl_4108 NC_011757.1 4331977 4332585 D KEGG: mex:Mext_4257 hypothetical protein; hypothetical protein 4331977..4332585 Methylobacterium extorquens CM4 7114415 YP_002422834.1 CDS Mchl_4109 NC_011757.1 4332729 4332986 D KEGG: mex:Mext_4256 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 4332729..4332986 Methylobacterium extorquens CM4 7114416 YP_002422835.1 CDS Mchl_4110 NC_011757.1 4333052 4334149 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_0043 helix-turn-helix domain-containing protein; AraC family transcriptional regulator 4333052..4334149 Methylobacterium extorquens CM4 7114417 YP_002422836.1 CDS Mchl_4111 NC_011757.1 4334146 4334376 D KEGG: mex:Mext_0042 hypothetical protein; hypothetical protein 4334146..4334376 Methylobacterium extorquens CM4 7114418 YP_002422837.1 CDS Mchl_4112 NC_011757.1 4334529 4336250 R KEGG: mex:Mext_0123 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase complement(4334529..4336250) Methylobacterium extorquens CM4 7114419 YP_002422838.1 CDS Mchl_4113 NC_011757.1 4337237 4337947 D KEGG: mmr:Mmar10_0158 hypothetical protein; hypothetical protein 4337237..4337947 Methylobacterium extorquens CM4 7114420 YP_002422839.1 CDS Mchl_4114 NC_011757.1 4338127 4338948 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3791 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4338127..4338948) Methylobacterium extorquens CM4 7114421 YP_002422840.1 CDS Mchl_4115 NC_011757.1 4339141 4339440 R KEGG: mex:Mext_3792 hypothetical protein; hypothetical protein complement(4339141..4339440) Methylobacterium extorquens CM4 7114422 YP_002422841.1 CDS Mchl_4116 NC_011757.1 4339667 4340116 D PFAM: regulatory protein MarR; KEGG: mex:Mext_3793 regulatory protein MarR; MarR family transcriptional regulator 4339667..4340116 Methylobacterium extorquens CM4 7114423 YP_002422842.1 CDS Mchl_4117 NC_011757.1 4340192 4340488 R KEGG: mex:Mext_3794 DoxX family protein; DoxX family protein complement(4340192..4340488) Methylobacterium extorquens CM4 7114424 YP_002422843.1 CDS Mchl_4118 NC_011757.1 4340599 4342005 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mex:Mext_3795 MATE efflux family protein; MATE efflux family protein complement(4340599..4342005) Methylobacterium extorquens CM4 7114425 YP_002422844.1 CDS Mchl_4119 NC_011757.1 4342039 4342395 R KEGG: mex:Mext_3796 hypothetical protein; hypothetical protein complement(4342039..4342395) Methylobacterium extorquens CM4 7114426 YP_002422845.1 CDS Mchl_4120 NC_011757.1 4342559 4343101 R PFAM: regulatory protein TetR; KEGG: mex:Mext_3797 regulatory protein TetR; TetR family transcriptional regulator complement(4342559..4343101) Methylobacterium extorquens CM4 7114427 YP_002422846.1 CDS Mchl_4121 NC_011757.1 4343341 4346448 R PFAM: acriflavin resistance protein; KEGG: mex:Mext_3798 acriflavin resistance protein; acriflavin resistance protein complement(4343341..4346448) Methylobacterium extorquens CM4 7114428 YP_002422847.1 CDS Mchl_4122 NC_011757.1 4346445 4347530 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_3799 RND family efflux transporter MFP subunit; efflux transporter RND family MFP subunit complement(4346445..4347530) Methylobacterium extorquens CM4 7114429 YP_002422848.1 CDS Mchl_4123 NC_011757.1 4347709 4347969 D KEGG: azc:AZC_1282 hypothetical protein; hypothetical protein 4347709..4347969 Methylobacterium extorquens CM4 7114430 YP_002422849.1 CDS Mchl_4126 NC_011757.1 4348721 4349140 D KEGG: mex:Mext_3818 hypothetical protein; CopG/Arc/MetJ family transcriptional regulator 4348721..4349140 Methylobacterium extorquens CM4 7114433 YP_002422850.1 CDS Mchl_4127 NC_011757.1 4349214 4350473 D TIGRFAM: esterase, PHB depolymerase family; PFAM: esterase PHB depolymerase; KEGG: mex:Mext_3819 PHB depolymerase family esterase; esterase, PHB depolymerase family 4349214..4350473 Methylobacterium extorquens CM4 7114434 YP_002422851.1 CDS Mchl_4129 NC_011757.1 4350650 4351726 R PFAM: choloylglycine hydrolase; KEGG: mex:Mext_3821 choloylglycine hydrolase; choloylglycine hydrolase complement(4350650..4351726) Methylobacterium extorquens CM4 7114436 YP_002422852.1 CDS Mchl_4130 NC_011757.1 4352193 4353098 D PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3822 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4352193..4353098 Methylobacterium extorquens CM4 7114437 YP_002422853.1 CDS Mchl_4131 NC_011757.1 4353077 4353946 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3823 LysR substrate-binding; LysR family transcriptional regulator complement(4353077..4353946) Methylobacterium extorquens CM4 7114438 YP_002422854.1 CDS Mchl_4132 NC_011757.1 4354044 4354262 D KEGG: mpo:Mpop_0679 hypothetical protein; hypothetical protein 4354044..4354262 Methylobacterium extorquens CM4 7114439 YP_002422855.1 CDS Mchl_4133 NC_011757.1 4354410 4355117 D PFAM: protein of unknown function DUF1275; KEGG: mex:Mext_3824 hypothetical protein; hypothetical protein 4354410..4355117 Methylobacterium extorquens CM4 7114440 YP_002422856.1 CDS Mchl_4134 NC_011757.1 4355564 4356367 D PFAM: helix-turn-helix domain protein; GAF domain protein; KEGG: mex:Mext_3825 GAF domain-containing protein; XRE family transcriptional regulator 4355564..4356367 Methylobacterium extorquens CM4 7114441 YP_002422857.1 CDS Mchl_4135 NC_011757.1 4356498 4358195 D KEGG: mex:Mext_3826 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 4356498..4358195 Methylobacterium extorquens CM4 7114442 YP_002422858.1 CDS Mchl_4136 NC_011757.1 4358530 4360020 D KEGG: mex:Mext_3827 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 4358530..4360020 Methylobacterium extorquens CM4 7114443 YP_002422859.1 CDS Mchl_4137 NC_011757.1 4360684 4361043 D inactive form; acid-resistance protein 4360684..4361043 Methylobacterium extorquens CM4 7114444 YP_002422860.1 CDS Mchl_4138 NC_011757.1 4361588 4362955 R PFAM: chloride channel core; KEGG: mex:Mext_3829 chloride channel core; chloride channel core complement(4361588..4362955) Methylobacterium extorquens CM4 7114445 YP_002422861.1 CDS Mchl_4139 NC_011757.1 4363083 4366214 R TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mpo:Mpop_5127 transporter hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(4363083..4366214) Methylobacterium extorquens CM4 7114446 YP_002422862.1 CDS Mchl_4140 NC_011757.1 4366322 4367632 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_3832 RND family efflux transporter MFP subunit; efflux transporter RND family MFP subunit complement(4366322..4367632) Methylobacterium extorquens CM4 7115103 YP_002422863.1 CDS Mchl_4141 NC_011757.1 4367699 4367932 R hypothetical protein complement(4367699..4367932) Methylobacterium extorquens CM4 7115266 YP_002422864.1 CDS Mchl_4142 NC_011757.1 4368469 4369479 R TIGRFAM: cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: mex:Mext_3833 cytochrome d ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II complement(4368469..4369479) Methylobacterium extorquens CM4 7115267 YP_002422865.1 CDS Mchl_4143 NC_011757.1 4369494 4370918 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: mex:Mext_3834 cytochrome bd ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I complement(4369494..4370918) Methylobacterium extorquens CM4 7115268 YP_002422866.1 CDS Mchl_4144 NC_011757.1 4371164 4371946 R PFAM: protein of unknown function DUF81; KEGG: mex:Mext_3835 hypothetical protein; hypothetical protein complement(4371164..4371946) Methylobacterium extorquens CM4 7115269 YP_002422867.1 CDS Mchl_4145 NC_011757.1 4371943 4372371 R PFAM: regulatory protein ArsR; KEGG: mex:Mext_3836 regulatory protein ArsR; ArsR family transcriptional regulator complement(4371943..4372371) Methylobacterium extorquens CM4 7115270 YP_002422868.1 CDS Mchl_4146 NC_011757.1 4372368 4373261 R PFAM: beta-lactamase; KEGG: mex:Mext_3837 beta-lactamase domain-containing protein; beta-lactamase complement(4372368..4373261) Methylobacterium extorquens CM4 7115271 YP_002422869.1 CDS Mchl_4147 NC_011757.1 4373264 4373929 R PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: mex:Mext_3838 peroxiredoxin; peroxiredoxin complement(4373264..4373929) Methylobacterium extorquens CM4 7115272 YP_002422870.1 CDS Mchl_4148 NC_011757.1 4374056 4375729 D PFAM: protein of unknown function DUF442; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_3839 hypothetical protein; hypothetical protein 4374056..4375729 Methylobacterium extorquens CM4 7115273 YP_002422871.1 CDS Mchl_4149 NC_011757.1 4375978 4377096 D KEGG: mex:Mext_3840 tetratricopeptide TPR_4; tetratricopeptide TPR_4 4375978..4377096 Methylobacterium extorquens CM4 7115274 YP_002422872.1 CDS Mchl_4150 NC_011757.1 4377170 4378036 R PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3841 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(4377170..4378036) Methylobacterium extorquens CM4 7115275 YP_002422873.1 CDS Mchl_4151 NC_011757.1 4378203 4379252 D PFAM: periplasmic binding protein; KEGG: mex:Mext_3842 periplasmic binding protein; periplasmic binding protein 4378203..4379252 Methylobacterium extorquens CM4 7115276 YP_002422874.1 CDS Mchl_4152 NC_011757.1 4379249 4380298 D PFAM: transporter permease; ABC-3 protein; KEGG: mex:Mext_3843 transporter permease; transporter permease 4379249..4380298 Methylobacterium extorquens CM4 7115277 YP_002422875.1 CDS Mchl_4153 NC_011757.1 4380295 4381068 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3844 ABC transporter; ABC transporter 4380295..4381068 Methylobacterium extorquens CM4 7115278 YP_002422876.1 CDS Mchl_4154 NC_011757.1 4381078 4381821 R PFAM: oxidoreductase molybdopterin binding; KEGG: mex:Mext_3845 oxidoreductase molybdopterin binding; molybdopterin binding oxidoreductase complement(4381078..4381821) Methylobacterium extorquens CM4 7115279 YP_002422877.1 CDS Mchl_4155 NC_011757.1 4381818 4382546 R KEGG: mex:Mext_3846 hypothetical protein; hypothetical protein complement(4381818..4382546) Methylobacterium extorquens CM4 7115280 YP_002422878.1 CDS Mchl_4156 NC_011757.1 4382560 4383156 R PFAM: NodS family protein; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_3847 methyltransferase type 12; type 12 methyltransferase complement(4382560..4383156) Methylobacterium extorquens CM4 7115281 YP_002422879.1 CDS Mchl_4157 NC_011757.1 4383153 4384328 R PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3848 acyl-CoA dehydrogenase type 2; acyl-CoA dehydrogenase type 2 domain-containing protein complement(4383153..4384328) Methylobacterium extorquens CM4 7115282 YP_002422880.1 CDS Mchl_4158 NC_011757.1 4384569 4384856 D KEGG: mex:Mext_3849 hypothetical protein; hypothetical protein 4384569..4384856 Methylobacterium extorquens CM4 7115283 YP_002422881.1 CDS Mchl_4159 NC_011757.1 4384871 4385107 D KEGG: mex:Mext_3850 hypothetical protein; hypothetical protein 4384871..4385107 Methylobacterium extorquens CM4 7115284 YP_002422882.1 CDS Mchl_4160 NC_011757.1 4385110 4385328 D KEGG: mex:Mext_3851 hypothetical protein; hypothetical protein 4385110..4385328 Methylobacterium extorquens CM4 7115285 YP_002422883.1 CDS Mchl_4161 NC_011757.1 4385416 4386450 R PFAM: aldo/keto reductase; KEGG: mex:Mext_3852 aldo/keto reductase; aldo/keto reductase complement(4385416..4386450) Methylobacterium extorquens CM4 7115286 YP_002422884.1 CDS Mchl_4162 NC_011757.1 4386763 4386990 D KEGG: mex:Mext_3853 hypothetical protein; hypothetical protein 4386763..4386990 Methylobacterium extorquens CM4 7115287 YP_002422885.1 CDS Mchl_4163 NC_011757.1 4386996 4387595 R PFAM: isochorismatase hydrolase; KEGG: mex:Mext_3854 isochorismatase hydrolase; isochorismatase hydrolase complement(4386996..4387595) Methylobacterium extorquens CM4 7115288 YP_002422886.1 CDS Mchl_4164 NC_011757.1 4387869 4389185 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_3855 RND family efflux transporter MFP subunit; efflux transporter RND family MFP subunit complement(4387869..4389185) Methylobacterium extorquens CM4 7115289 YP_002422887.1 CDS Mchl_4165 NC_011757.1 4389178 4392408 R PFAM: acriflavin resistance protein; KEGG: mex:Mext_3856 acriflavin resistance protein; acriflavin resistance protein complement(4389178..4392408) Methylobacterium extorquens CM4 7115290 YP_002422888.1 CDS Mchl_4166 NC_011757.1 4392720 4394096 R KEGG: mex:Mext_3857 hypothetical protein; hypothetical protein complement(4392720..4394096) Methylobacterium extorquens CM4 7115291 YP_002422889.1 CDS Mchl_4167 NC_011757.1 4394093 4394830 R PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mex:Mext_3858 NADP oxidoreductase coenzyme F420-dependent; NADP oxidoreductase coenzyme F420-dependent complement(4394093..4394830) Methylobacterium extorquens CM4 7115292 YP_002422890.1 CDS Mchl_4168 NC_011757.1 4394820 4395749 R PFAM: aldo/keto reductase; KEGG: mex:Mext_3859 aldo/keto reductase; aldo/keto reductase complement(4394820..4395749) Methylobacterium extorquens CM4 7115293 YP_002422891.1 CDS Mchl_4169 NC_011757.1 4395822 4396376 R TIGRFAM: methyltransferase; PFAM: protein of unknown function methylase KEGG: mex:Mext_3860 methyltransferase; methyltransferase complement(4395822..4396376) Methylobacterium extorquens CM4 7115294 YP_002422892.1 CDS Mchl_4170 NC_011757.1 4396389 4398413 R PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mex:Mext_3861 RNA-binding S4 domain-containing protein; RNA-binding S4 domain-containing protein complement(4396389..4398413) Methylobacterium extorquens CM4 7115295 YP_002422893.1 CDS Mchl_4171 NC_011757.1 4398504 4398680 R PFAM: protein of unknown function DUF1328; KEGG: mex:Mext_3862 hypothetical protein; hypothetical protein complement(4398504..4398680) Methylobacterium extorquens CM4 7115296 YP_002422894.1 CDS Mchl_4172 NC_011757.1 4398848 4399615 R TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: mex:Mext_3863 arsenical resistance protein ArsH; arsenical resistance protein ArsH complement(4398848..4399615) Methylobacterium extorquens CM4 7115297 YP_002422895.1 CDS Mchl_4173 NC_011757.1 4399666 4400025 D SMART: regulatory protein ArsR; KEGG: mex:Mext_3864 regulatory protein ArsR; ArsR family transcriptional regulator 4399666..4400025 Methylobacterium extorquens CM4 7115298 YP_002422896.1 CDS Mchl_4174 NC_011757.1 4400018 4400455 D TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: mex:Mext_3865 arsenate reductase; arsenate reductase 4400018..4400455 Methylobacterium extorquens CM4 7115299 YP_002422897.1 CDS Mchl_4175 NC_011757.1 4400465 4401541 D TIGRFAM: arsenic resistance protein; PFAM: Bile acid:sodium symporter; KEGG: mex:Mext_3866 arsenic resistance protein; arsenic resistance protein 4400465..4401541 Methylobacterium extorquens CM4 7115300 YP_002422898.1 CDS Mchl_4176 NC_011757.1 4401739 4403841 R KEGG: mex:Mext_3867 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(4401739..4403841) Methylobacterium extorquens CM4 7115301 YP_002422899.1 CDS Mchl_4177 NC_011757.1 4404145 4405062 D PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3868 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4404145..4405062 Methylobacterium extorquens CM4 7115302 YP_002422900.1 CDS Mchl_4178 NC_011757.1 4405067 4405768 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3869 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4405067..4405768) Methylobacterium extorquens CM4 7115303 YP_002422901.1 CDS Mchl_4179 NC_011757.1 4405860 4406303 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mex:Mext_3870 CMP/dCMP deaminase zinc-binding; zinc-binding CMP/dCMP deaminase complement(4405860..4406303) Methylobacterium extorquens CM4 7115304 YP_002422902.1 CDS Mchl_4180 NC_011757.1 4406317 4407624 R KEGG: mex:Mext_3871 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase; phosphoribosylamine/glycine ligase complement(4406317..4407624) Methylobacterium extorquens CM4 7115305 YP_002422903.1 CDS Mchl_4181 NC_011757.1 4407708 4408445 D KEGG: mex:Mext_3872 hypothetical protein; hypothetical protein 4407708..4408445 Methylobacterium extorquens CM4 7115306 YP_002422904.1 CDS Mchl_4182 NC_011757.1 4408523 4408747 D KEGG: mpo:Mpop_4329 hypothetical protein; hypothetical protein 4408523..4408747 Methylobacterium extorquens CM4 7115307 YP_002422905.1 CDS Mchl_4183 NC_011757.1 4408972 4410543 D KEGG: mex:Mext_3873 exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII large subunit; PFAM: exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit 4408972..4410543 Methylobacterium extorquens CM4 7115308 YP_002422906.1 CDS Mchl_4184 NC_011757.1 4410688 4410915 D KEGG: mex:Mext_3874 hypothetical protein; hypothetical protein 4410688..4410915 Methylobacterium extorquens CM4 7115309 YP_002422907.1 CDS Mchl_4185 NC_011757.1 4411083 4412027 D KEGG: mex:Mext_3875 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 4411083..4412027 Methylobacterium extorquens CM4 7115310 YP_002422908.1 CDS Mchl_4186 NC_011757.1 4412149 4412613 R PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mex:Mext_3876 transcription elongation factor GreA/GreB domain-containing protein; GreA/GreB family elongation factor complement(4412149..4412613) Methylobacterium extorquens CM4 7115311 YP_002422909.1 CDS Mchl_4187 NC_011757.1 4412634 4413632 R TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_3877 quinone oxidoreductase; YhdH/YhfP family quinone oxidoreductase complement(4412634..4413632) Methylobacterium extorquens CM4 7115312 YP_002422910.1 CDS Mchl_4188 NC_011757.1 4413738 4414334 R KEGG: mex:Mext_3878 hypothetical protein; hypothetical protein complement(4413738..4414334) Methylobacterium extorquens CM4 7115313 YP_002422911.1 CDS Mchl_4189 NC_011757.1 4414813 4415151 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mex:Mext_3879 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 4414813..4415151 Methylobacterium extorquens CM4 7115314 YP_002422912.1 CDS Mchl_4190 NC_011757.1 4415670 4416260 D PFAM: transcription factor CarD; KEGG: mex:Mext_3880 transcription factor CarD; CarD family transcriptional regulator 4415670..4416260 Methylobacterium extorquens CM4 7115315 YP_002422913.1 CDS rpoH2 NC_011757.1 4416543 4417415 D binds with the catalytic core of RNA polymerase to produce the holoenzyme; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma-32 is responsible for the expression of heat shock promoters; there are paralogs in Rhizobium and Sinorhizobium; the proteins in this cluster act as secondary heat shock sigma factors; the Rhizobium sigma-32 factor may also be involved in exopolysaccharide production; RNA polymerase factor sigma-32 4416543..4417415 Methylobacterium extorquens CM4 7115316 YP_002422914.1 CDS Mchl_4192 NC_011757.1 4417481 4418176 R KEGG: bpm:BURPS1710b_1763 hypothetical protein; hypothetical protein complement(4417481..4418176) Methylobacterium extorquens CM4 7115317 YP_002422915.1 CDS Mchl_4193 NC_011757.1 4418669 4420336 R PFAM: Resolvase domain; Recombinase; KEGG: nwi:Nwi_3138 resolvase; Resolvase domain complement(4418669..4420336) Methylobacterium extorquens CM4 7115320 YP_002422916.1 CDS Mchl_4195 NC_011757.1 4421162 4421527 D PFAM: protein of unknown function DUF971; KEGG: mrd:Mrad2831_6148 hypothetical protein; hypothetical protein 4421162..4421527 Methylobacterium extorquens CM4 7115322 YP_002422917.1 CDS Mchl_4196 NC_011757.1 4421594 4423336 D PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; KEGG: mrd:Mrad2831_6149 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; oxidoreductase 4421594..4423336 Methylobacterium extorquens CM4 7115323 YP_002422918.1 CDS Mchl_4197 NC_011757.1 4423378 4423611 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mrd:Mrad2831_6150 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 4423378..4423611 Methylobacterium extorquens CM4 7115324 YP_002422919.1 CDS Mchl_4198 NC_011757.1 4423622 4424587 D PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: mrd:Mrad2831_6151 heat repeat-containing PBS lyase; HEAT domain-containing protein 4423622..4424587 Methylobacterium extorquens CM4 7115325 YP_002422920.1 CDS Mchl_4199 NC_011757.1 4424739 4425521 D PFAM: cyclic nucleotide-binding; KEGG: mrd:Mrad2831_6152 Crp/FNR family transcriptional regulator; cyclic nucleotide-binding protein 4424739..4425521 Methylobacterium extorquens CM4 7115326 YP_002422921.1 CDS Mchl_4200 NC_011757.1 4425685 4427112 D KEGG: mrd:Mrad2831_6153 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 4425685..4427112 Methylobacterium extorquens CM4 7115327 YP_002422922.1 CDS Mchl_4201 NC_011757.1 4427112 4428029 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mrd:Mrad2831_6154 binding-protein-dependent transporters inner membrane component; binding-protein-dependent transporters inner membrane component 4427112..4428029 Methylobacterium extorquens CM4 7115328 YP_002422923.1 CDS Mchl_4202 NC_011757.1 4428077 4428937 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mrd:Mrad2831_6155 ABC transporter; ABC transporter 4428077..4428937 Methylobacterium extorquens CM4 7115329 YP_002422924.1 CDS Mchl_4203 NC_011757.1 4429045 4429383 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mrd:Mrad2831_6156 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 4429045..4429383 Methylobacterium extorquens CM4 7115330 YP_002422925.1 CDS Mchl_4204 NC_011757.1 4429411 4430184 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: mpo:Mpop_2286 oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain-containing protein 4429411..4430184 Methylobacterium extorquens CM4 7115331 YP_002422926.1 CDS Mchl_4205 NC_011757.1 4430362 4430589 D KEGG: mpo:Mpop_0212 hypothetical protein; hypothetical protein 4430362..4430589 Methylobacterium extorquens CM4 7115332 YP_002422927.1 CDS Mchl_4206 NC_011757.1 4430648 4431553 R PFAM: CoA-binding protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: rpe:RPE_3202 succinyl-CoA synthetase, alpha subunit; CoA-binding protein complement(4430648..4431553) Methylobacterium extorquens CM4 7115333 YP_002422928.1 CDS Mchl_4207 NC_011757.1 4431550 4432704 R PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; KEGG: rpe:RPE_3203 succinate--CoA ligase (ADP-forming); succinate--CoA ligase complement(4431550..4432704) Methylobacterium extorquens CM4 7115334 YP_002422929.1 CDS Mchl_4208 NC_011757.1 4432701 4434143 R PFAM: aldehyde dehydrogenase; KEGG: rpe:RPE_3204 hypothetical protein; aldehyde dehydrogenase complement(4432701..4434143) Methylobacterium extorquens CM4 7115335 YP_002422930.1 CDS Mchl_4209 NC_011757.1 4434204 4435511 R PFAM: major facilitator superfamily MFS_1; KEGG: pde:Pden_1011 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(4434204..4435511) Methylobacterium extorquens CM4 7115336 YP_002422931.1 CDS Mchl_4210 NC_011757.1 4436045 4436257 D hypothetical protein 4436045..4436257 Methylobacterium extorquens CM4 7115337 YP_002422932.1 CDS Mchl_4211 NC_011757.1 4436675 4438354 D PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: cti:RALTA_B1541 choline dehydrogenase, a flavoprotein; glucose-methanol-choline oxidoreductase 4436675..4438354 Methylobacterium extorquens CM4 7115338 YP_002422933.1 CDS Mchl_4212 NC_011757.1 4438351 4439727 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: cti:RALTA_B1542 shikimate and dehydroshikimate transporter (); MFS family transporter; major facilitator superfamily protein 4438351..4439727 Methylobacterium extorquens CM4 7115339 YP_002422934.1 CDS Mchl_4213 NC_011757.1 4439820 4440890 D PFAM: conserved hypothetical protein; KEGG: mpo:Mpop_0213 hypothetical protein; hypothetical protein 4439820..4440890 Methylobacterium extorquens CM4 7115340 YP_002422935.1 CDS Mchl_4214 NC_011757.1 4441041 4442816 R catalyzes the formation of acetyl phosphate and sulfite from 2-sulfoacetaldehyde; is active when grown on taurine as a sole carbon source; sulfoacetaldehyde acetyltransferase complement(4441041..4442816) Methylobacterium extorquens CM4 7115341 YP_002422936.1 CDS Mchl_4215 NC_011757.1 4442985 4443761 D PFAM: regulatory protein IclR; transcriptional regulator IclR; KEGG: reu:Reut_B3754 regulatory protein, IclR; IclR family transcriptional regulator 4442985..4443761 Methylobacterium extorquens CM4 7115342 YP_002422937.1 CDS Mchl_4216 NC_011757.1 4443797 4444966 D TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: met:M446_6098 acetate kinase; acetate kinase 4443797..4444966 Methylobacterium extorquens CM4 7115343 YP_002422938.1 CDS Mchl_4217 NC_011757.1 4444981 4445343 R KEGG: bpt:Bpet3233 hypothetical protein; hypothetical protein complement(4444981..4445343) Methylobacterium extorquens CM4 7115344 YP_002422939.1 CDS Mchl_4218 NC_011757.1 4445343 4446566 R PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: sme:SMc04049 sulfite oxidase protein; molybdopterin binding oxidoreductase complement(4445343..4446566) Methylobacterium extorquens CM4 7115345 YP_002422940.1 CDS Mchl_4219 NC_011757.1 4446662 4448188 R PFAM: protein of unknown function DUF112 transmembrane; KEGG: jan:Jann_1159 hypothetical protein; hypothetical protein complement(4446662..4448188) Methylobacterium extorquens CM4 7115346 YP_002422941.1 CDS Mchl_4220 NC_011757.1 4448207 4448767 R KEGG: tfu:Tfu_1713 hypothetical protein; hypothetical protein complement(4448207..4448767) Methylobacterium extorquens CM4 7117371 YP_002422942.1 CDS Mchl_4221 NC_011757.1 4448769 4449725 R PFAM: conserved hypothetical protein; KEGG: tle:Tlet_1456 uncharacterized protein UPF0065; hypothetical protein complement(4448769..4449725) Methylobacterium extorquens CM4 7117455 YP_002422943.1 CDS Mchl_4222 NC_011757.1 4449862 4450743 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpb:RPB_2839 LysR family transcriptional regulator; LysR family transcriptional regulator 4449862..4450743 Methylobacterium extorquens CM4 7117456 YP_002422944.1 CDS Mchl_4226 NC_011757.1 4451535 4452647 D PFAM: glycosyl transferase group 1; KEGG: mxa:MXAN_1042 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 4451535..4452647 Methylobacterium extorquens CM4 7117460 YP_002422945.1 CDS Mchl_4228 NC_011757.1 4454091 4455293 D PFAM: polysaccharide biosynthesis protein; KEGG: psa:PST_2496 hypothetical protein; polysaccharide biosynthesis protein 4454091..4455293 Methylobacterium extorquens CM4 7117462 YP_002422946.1 CDS Mchl_4233 NC_011757.1 4458373 4459254 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: tbd:Tbd_0898 hypothetical protein; type 11 methyltransferase complement(4458373..4459254) Methylobacterium extorquens CM4 7117467 YP_002422947.1 CDS Mchl_4236 NC_011757.1 4461544 4462032 D KEGG: GI23660 gene product from transcript GI23660-RA; hypothetical protein 4461544..4462032 Methylobacterium extorquens CM4 7117470 YP_002422948.1 CDS Mchl_4237 NC_011757.1 4462032 4463993 D PFAM: glycoside hydrolase family 5; KEGG: azc:AZC_1128 hypothetical protein; glycoside hydrolase family protein 4462032..4463993 Methylobacterium extorquens CM4 7117471 YP_002422949.1 CDS Mchl_4239 NC_011757.1 4464710 4465372 R PFAM: sugar transferase; KEGG: bid:Bind_1034 undecaprenyl-phosphate glucose phosphotransferase; sugar transferase complement(4464710..4465372) Methylobacterium extorquens CM4 7117473 YP_002422950.1 CDS Mchl_4243 NC_011757.1 4468064 4469326 R hypothetical protein complement(4468064..4469326) Methylobacterium extorquens CM4 7117477 YP_002422951.1 CDS Mchl_4247 NC_011757.1 4472138 4473457 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: bra:BRADO4751 hypothetical protein; lipopolysaccharide biosynthesis protein complement(4472138..4473457) Methylobacterium extorquens CM4 7117481 YP_002422952.1 CDS Mchl_4248 NC_011757.1 4473483 4474700 R PFAM: glycosyl transferase group 1; KEGG: oan:Oant_0391 glycosyl transferase group 1; group 1 glycosyl transferase complement(4473483..4474700) Methylobacterium extorquens CM4 7117482 YP_002422953.1 CDS Mchl_4249 NC_011757.1 4474725 4475846 R PFAM: glycosyl transferase group 1; protein of unknown function DUF1972; KEGG: met:M446_1455 polysaccharide export protein; hypothetical protein complement(4474725..4475846) Methylobacterium extorquens CM4 7117483 YP_002422954.1 CDS Mchl_4250 NC_011757.1 4475916 4477082 R PFAM: glycosyl transferase group 1; KEGG: mae:Maeo_0395 glycosyl transferase group 1; group 1 glycosyl transferase complement(4475916..4477082) Methylobacterium extorquens CM4 7117484 YP_002422955.1 CDS Mchl_4251 NC_011757.1 4477840 4478094 R hypothetical protein complement(4477840..4478094) Methylobacterium extorquens CM4 7117485 YP_002422956.1 CDS Mchl_4252 NC_011757.1 4481038 4481436 R KEGG: met:M446_1177 integrase family protein; integrase family protein complement(4481038..4481436) Methylobacterium extorquens CM4 7117486 YP_002422957.1 CDS Mchl_4253 NC_011757.1 4482078 4483502 R TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid complement(4482078..4483502) Methylobacterium extorquens CM4 7117487 YP_002422958.1 CDS Mchl_4254 NC_011757.1 4483796 4485418 D PFAM: Hemolysin-type calcium-binding region; KEGG: mex:Mext_3886 hemolysin-type calcium-binding region; hemolysin-type calcium-binding region 4483796..4485418 Methylobacterium extorquens CM4 7117488 YP_002422959.1 CDS Mchl_4255 NC_011757.1 4485457 4486431 R SMART: PDZ/DHR/GLGF domain protein; KEGG: mex:Mext_3887 PDZ/DHR/GLGF domain-containing protein; PDZ/DHR/GLGF domain-containing protein complement(4485457..4486431) Methylobacterium extorquens CM4 7117489 YP_002422960.1 CDS Mchl_4256 NC_011757.1 4486872 4487426 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_3888 sigma-70 family RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 4486872..4487426 Methylobacterium extorquens CM4 7117490 YP_002422961.1 CDS Mchl_4257 NC_011757.1 4487423 4488202 D KEGG: mex:Mext_3889 uncharacterized protein-like protein; hypothetical protein 4487423..4488202 Methylobacterium extorquens CM4 7117491 YP_002422962.1 CDS Mchl_4258 NC_011757.1 4488367 4489308 R KEGG: mex:Mext_3890 hypothetical protein; hypothetical protein complement(4488367..4489308) Methylobacterium extorquens CM4 7117492 YP_002422963.1 CDS Mchl_4259 NC_011757.1 4489862 4492939 R TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter related; KEGG: mex:Mext_3891 excinuclease ABC subunit A; excinuclease ABC subunit A complement(4489862..4492939) Methylobacterium extorquens CM4 7117493 YP_002422964.1 CDS Mchl_4260 NC_011757.1 4493360 4494418 D KEGG: mex:Mext_3892 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4493360..4494418 Methylobacterium extorquens CM4 7117494 YP_002422965.1 CDS Mchl_4261 NC_011757.1 4494581 4496620 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; nitrate and nitrite sensing domain protein; KEGG: mex:Mext_3893 nitrate and nitrite sensing domain-containing protein; methyl-accepting chemotaxis sensory transducer 4494581..4496620 Methylobacterium extorquens CM4 7117495 YP_002422966.1 CDS Mchl_4262 NC_011757.1 4496740 4497945 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_3894 RND family efflux transporter MFP subunit; efflux transporter RND family MFP subunit complement(4496740..4497945) Methylobacterium extorquens CM4 7117496 YP_002422967.1 CDS Mchl_4263 NC_011757.1 4498100 4501264 D TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_3895 hydrophobe/amphiphile efflux-1 (HAE1) family protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 4498100..4501264 Methylobacterium extorquens CM4 7117497 YP_002422968.1 CDS Mchl_4264 NC_011757.1 4501275 4501676 R KEGG: mex:Mext_3896 hypothetical protein; response regulator receiver protein complement(4501275..4501676) Methylobacterium extorquens CM4 7117498 YP_002422969.1 CDS Mchl_4265 NC_011757.1 4501781 4504573 R KEGG: mex:Mext_3897 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase complement(4501781..4504573) Methylobacterium extorquens CM4 7117499 YP_002422970.1 CDS Mchl_4266 NC_011757.1 4504799 4505560 R SMART: regulatory protein Crp; KEGG: mex:Mext_3898 regulatory protein Crp; Crp/Fnr family transcriptional regulator complement(4504799..4505560) Methylobacterium extorquens CM4 7117500 YP_002422971.1 CDS Mchl_4267 NC_011757.1 4505815 4506666 R PFAM: glycoside hydrolase family 25; KEGG: mex:Mext_3899 glycoside hydrolase family protein; glycoside hydrolase family protein complement(4505815..4506666) Methylobacterium extorquens CM4 7117501 YP_002422972.1 CDS Mchl_4268 NC_011757.1 4506863 4507315 D PFAM: protein of unknown function DUF1130; KEGG: mex:Mext_3900 hypothetical protein; hypothetical protein 4506863..4507315 Methylobacterium extorquens CM4 7117502 YP_002422973.1 CDS Mchl_4269 NC_011757.1 4507370 4508605 R TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: mex:Mext_3901 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase complement(4507370..4508605) Methylobacterium extorquens CM4 7117503 YP_002422974.1 CDS Mchl_4270 NC_011757.1 4509018 4509221 D KEGG: mpo:Mpop_4373 hypothetical protein; hypothetical protein 4509018..4509221 Methylobacterium extorquens CM4 7117504 YP_002422975.1 CDS Mchl_4271 NC_011757.1 4509221 4509445 D KEGG: mex:Mext_3902 hypothetical protein; hypothetical protein 4509221..4509445 Methylobacterium extorquens CM4 7117505 YP_002422976.1 CDS Mchl_4272 NC_011757.1 4509619 4510590 D PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_3903 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 4509619..4510590 Methylobacterium extorquens CM4 7117506 YP_002422977.1 CDS Mchl_4273 NC_011757.1 4510674 4511300 D PFAM: isochorismatase hydrolase; KEGG: mex:Mext_3904 nicotinamidase; nicotinamidase 4510674..4511300 Methylobacterium extorquens CM4 7117507 YP_002422978.1 CDS Mchl_4274 NC_011757.1 4511470 4512327 R PFAM: aminotransferase class IV; KEGG: mex:Mext_3905 aminotransferase class IV; class IV aminotransferase complement(4511470..4512327) Methylobacterium extorquens CM4 7117508 YP_002422979.1 CDS Mchl_4275 NC_011757.1 4512314 4512943 R TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: mex:Mext_3906 glutamine amidotransferase; glutamine amidotransferase complement(4512314..4512943) Methylobacterium extorquens CM4 7117509 YP_002422980.1 CDS Mchl_4276 NC_011757.1 4512940 4514340 R TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: anthranilate synthase component I domain protein; chorismate binding-like; KEGG: mex:Mext_3907 para-aminobenzoate synthase, subunit I; para-aminobenzoate synthase subunit I complement(4512940..4514340) Methylobacterium extorquens CM4 7117510 YP_002422981.1 CDS rimO NC_011757.1 4514793 4516139 D catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 4514793..4516139 Methylobacterium extorquens CM4 7117511 YP_002422982.1 CDS Mchl_4278 NC_011757.1 4516236 4516421 D KEGG: mex:Mext_3911 hypothetical protein; hypothetical protein 4516236..4516421 Methylobacterium extorquens CM4 7117512 YP_002422983.1 CDS Mchl_4279 NC_011757.1 4516428 4516850 D KEGG: mex:Mext_3912 membrane protein-like protein; hypothetical protein 4516428..4516850 Methylobacterium extorquens CM4 7117513 YP_002422984.1 CDS Mchl_4280 NC_011757.1 4516939 4517130 D KEGG: mpo:Mpop_4385 hypothetical protein; hypothetical protein 4516939..4517130 Methylobacterium extorquens CM4 7117514 YP_002422985.1 CDS Mchl_4281 NC_011757.1 4517216 4518046 R TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: mex:Mext_3913 MazG family protein; MazG family protein complement(4517216..4518046) Methylobacterium extorquens CM4 7117515 YP_002422986.1 CDS Mchl_4282 NC_011757.1 4518812 4519909 D PFAM: plasmid encoded RepA protein; KEGG: mex:Mext_3914 plasmid encoded RepA protein; plasmid encoded RepA protein 4518812..4519909 Methylobacterium extorquens CM4 7117516 YP_002422987.1 CDS Mchl_4283 NC_011757.1 4520390 4520944 D KEGG: mex:Mext_3915 hypothetical protein; hypothetical protein 4520390..4520944 Methylobacterium extorquens CM4 7117517 YP_002422988.1 CDS Mchl_4284 NC_011757.1 4521155 4522468 R PFAM: patatin; KEGG: mex:Mext_3916 patatin; patatin complement(4521155..4522468) Methylobacterium extorquens CM4 7117518 YP_002422989.1 CDS Mchl_4285 NC_011757.1 4522966 4524015 D PFAM: HpcH/HpaI aldolase; KEGG: mex:Mext_3917 HpcH/HpaI aldolase; HpcH/HpaI aldolase 4522966..4524015 Methylobacterium extorquens CM4 7117519 YP_002422990.1 CDS Mchl_4286 NC_011757.1 4524075 4524413 D TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: mex:Mext_3918 hemimethylated DNA binding protein; hemimethylated DNA binding protein 4524075..4524413 Methylobacterium extorquens CM4 7117520 YP_002422991.1 CDS Mchl_4287 NC_011757.1 4524594 4525823 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_3919 diguanylate cyclase; diguanylate cyclase 4524594..4525823 Methylobacterium extorquens CM4 7117521 YP_002422992.1 CDS Mchl_4288 NC_011757.1 4526000 4526182 R KEGG: mex:Mext_3920 hypothetical protein; hypothetical protein complement(4526000..4526182) Methylobacterium extorquens CM4 7117522 YP_002422993.1 CDS Mchl_4289 NC_011757.1 4526465 4527673 D TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_3921 RND family efflux transporter MFP subunit; efflux transporter RND family MFP subunit 4526465..4527673 Methylobacterium extorquens CM4 7117523 YP_002422994.1 CDS Mchl_4290 NC_011757.1 4527684 4530824 D PFAM: acriflavin resistance protein; KEGG: mex:Mext_3922 acriflavin resistance protein; acriflavin resistance protein 4527684..4530824 Methylobacterium extorquens CM4 7117524 YP_002422995.1 CDS Mchl_4291 NC_011757.1 4531240 4532397 D KEGG: mex:Mext_3923 metal dependent phophohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 4531240..4532397 Methylobacterium extorquens CM4 7117525 YP_002422996.1 CDS Mchl_4292 NC_011757.1 4532469 4533506 R TIGRFAM: agmatinase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: mex:Mext_3924 agmatinase; agmatinase complement(4532469..4533506) Methylobacterium extorquens CM4 7117526 YP_002422997.1 CDS Mchl_4293 NC_011757.1 4533859 4534863 D KEGG: mex:Mext_3925 hypothetical protein; hypothetical protein 4533859..4534863 Methylobacterium extorquens CM4 7117527 YP_002422998.1 CDS Mchl_4294 NC_011757.1 4534933 4535247 R KEGG: mex:Mext_3926 hypothetical protein; hypothetical protein complement(4534933..4535247) Methylobacterium extorquens CM4 7117528 YP_002422999.1 CDS Mchl_4295 NC_011757.1 4535448 4536740 R KEGG: mex:Mext_3927 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase complement(4535448..4536740) Methylobacterium extorquens CM4 7117529 YP_002423000.1 CDS Mchl_4296 NC_011757.1 4536792 4538357 R TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: aminoglycoside phosphotransferase; ABC transporter; KEGG: mex:Mext_3928 2-polyprenylphenol 6-hydroxylase; 2-polyprenylphenol 6-hydroxylase complement(4536792..4538357) Methylobacterium extorquens CM4 7117530 YP_002423001.1 CDS Mchl_4297 NC_011757.1 4538581 4539360 R TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_3929 ubiquinone/menaquinone biosynthesis methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase complement(4538581..4539360) Methylobacterium extorquens CM4 7117531 YP_002423002.1 CDS Mchl_4298 NC_011757.1 4539491 4539898 R KEGG: mex:Mext_3930 dihydrofolate reductase; dihydrofolate reductase complement(4539491..4539898) Methylobacterium extorquens CM4 7117532 YP_002423003.1 CDS Mchl_4299 NC_011757.1 4539971 4540714 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3931 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4539971..4540714) Methylobacterium extorquens CM4 7117533 YP_002423004.1 CDS Mchl_4300 NC_011757.1 4540720 4542195 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(4540720..4542195) Methylobacterium extorquens CM4 7117534 YP_002423005.1 CDS Mchl_4301 NC_011757.1 4542448 4543041 R PFAM: colicin V production protein; KEGG: mex:Mext_3933 colicin V production protein; colicin V production protein complement(4542448..4543041) Methylobacterium extorquens CM4 7117535 YP_002423006.1 CDS Mchl_4302 NC_011757.1 4543429 4544547 D PFAM: beta-lactamase; KEGG: mex:Mext_3934 beta-lactamase domain-containing protein; beta-lactamase 4543429..4544547 Methylobacterium extorquens CM4 7118839 YP_002423007.1 CDS Mchl_4303 NC_011757.1 4544540 4545160 D PFAM: electron transporter SCO1/SenC; KEGG: mex:Mext_3935 electron transporter SCO1/SenC; electron transporter SCO1/SenC 4544540..4545160 Methylobacterium extorquens CM4 7116466 YP_002423008.1 CDS Mchl_4304 NC_011757.1 4545167 4546597 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(4545167..4546597) Methylobacterium extorquens CM4 7116467 YP_002423009.1 CDS Mchl_4305 NC_011757.1 4546780 4547808 R KEGG: mex:Mext_3937 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase complement(4546780..4547808) Methylobacterium extorquens CM4 7116468 YP_002423010.1 CDS Mchl_4306 NC_011757.1 4547966 4549453 R TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase; KEGG: mex:Mext_3938 replicative DNA helicase; replicative DNA helicase complement(4547966..4549453) Methylobacterium extorquens CM4 7116469 YP_002423011.1 CDS rplI NC_011757.1 4549774 4550346 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(4549774..4550346) Methylobacterium extorquens CM4 7116470 YP_002423012.1 CDS Mchl_4308 NC_011757.1 4550384 4551442 R KEGG: mex:Mext_3940 hypothetical protein; hypothetical protein complement(4550384..4551442) Methylobacterium extorquens CM4 7116471 YP_002423013.1 CDS rpsR NC_011757.1 4551580 4551834 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(4551580..4551834) Methylobacterium extorquens CM4 7116472 YP_002423014.1 CDS rpsF NC_011757.1 4551837 4552292 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(4551837..4552292) Methylobacterium extorquens CM4 7116473 YP_002423015.1 CDS Mchl_4311 NC_011757.1 4552493 4553041 R PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_3943 gentamicin 3'-N-acetyltransferase; Gentamicin 3'-N-acetyltransferase complement(4552493..4553041) Methylobacterium extorquens CM4 7116474 YP_002423016.1 CDS Mchl_4312 NC_011757.1 4553051 4553425 R PFAM: protein of unknown function DUF1696; KEGG: mex:Mext_3944 hypothetical protein; hypothetical protein complement(4553051..4553425) Methylobacterium extorquens CM4 7116475 YP_002423017.1 CDS Mchl_4313 NC_011757.1 4553497 4553826 R KEGG: mex:Mext_3945 hypothetical protein; hypothetical protein complement(4553497..4553826) Methylobacterium extorquens CM4 7116476 YP_002423018.1 CDS Mchl_4314 NC_011757.1 4554236 4554616 R KEGG: mex:Mext_3946 hypothetical protein; hypothetical protein complement(4554236..4554616) Methylobacterium extorquens CM4 7116477 YP_002423019.1 CDS Mchl_4315 NC_011757.1 4554862 4555071 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_3947 cold-shock protein DNA-binding; cold-shock DNA-binding domain-containing protein complement(4554862..4555071) Methylobacterium extorquens CM4 7116478 YP_002423020.1 CDS Mchl_4316 NC_011757.1 4555645 4555905 R KEGG: mex:Mext_3948 hypothetical protein; hypothetical protein complement(4555645..4555905) Methylobacterium extorquens CM4 7116479 YP_002423021.1 CDS Mchl_4317 NC_011757.1 4556357 4556887 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 4556357..4556887 Methylobacterium extorquens CM4 7116480 YP_002423022.1 CDS Mchl_4318 NC_011757.1 4557013 4557456 D KEGG: mex:Mext_3950 hypothetical protein; hypothetical protein 4557013..4557456 Methylobacterium extorquens CM4 7116481 YP_002423023.1 CDS Mchl_4319 NC_011757.1 4557478 4559649 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_3951 TonB-dependent receptor plug; TonB-dependent receptor plug complement(4557478..4559649) Methylobacterium extorquens CM4 7116482 YP_002423024.1 CDS Mchl_4320 NC_011757.1 4559938 4560783 D KEGG: mex:Mext_3952 hypothetical protein; hypothetical protein 4559938..4560783 Methylobacterium extorquens CM4 7116483 YP_002423025.1 CDS Mchl_4321 NC_011757.1 4560800 4561309 R KEGG: mex:Mext_3953 hypothetical protein; hypothetical protein complement(4560800..4561309) Methylobacterium extorquens CM4 7116484 YP_002423026.1 CDS Mchl_4322 NC_011757.1 4561661 4562152 D PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_3954 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 4561661..4562152 Methylobacterium extorquens CM4 7116485 YP_002423027.1 CDS Mchl_4323 NC_011757.1 4562233 4563624 D PFAM: citrate transporter; KEGG: mex:Mext_3955 citrate transporter; citrate transporter 4562233..4563624 Methylobacterium extorquens CM4 7116486 YP_002423028.1 CDS Mchl_4324 NC_011757.1 4563785 4565101 D involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 4563785..4565101 Methylobacterium extorquens CM4 7116487 YP_002423029.1 CDS Mchl_4325 NC_011757.1 4565218 4566279 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3957 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 4565218..4566279 Methylobacterium extorquens CM4 7116488 YP_002423030.1 CDS Mchl_4326 NC_011757.1 4566306 4568012 R PFAM: fumarate lyase; delta crystallin domain protein; KEGG: mex:Mext_3958 fumarate lyase; fumarate lyase complement(4566306..4568012) Methylobacterium extorquens CM4 7116489 YP_002423031.1 CDS Mchl_4327 NC_011757.1 4568201 4569742 R KEGG: mex:Mext_3959 hypothetical protein; hypothetical protein complement(4568201..4569742) Methylobacterium extorquens CM4 7116490 YP_002423032.1 CDS Mchl_4328 NC_011757.1 4570460 4572124 D PFAM: porin; KEGG: mex:Mext_3960 porin; porin 4570460..4572124 Methylobacterium extorquens CM4 7116491 YP_002423033.1 CDS Mchl_4329 NC_011757.1 4572327 4573238 D PFAM: extracellular solute-binding protein family 3; KEGG: mex:Mext_3961 extracellular solute-binding protein; family 3 extracellular solute-binding protein 4572327..4573238 Methylobacterium extorquens CM4 7116492 YP_002423034.1 CDS Mchl_4330 NC_011757.1 4573273 4573995 D TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3962 polar amino acid ABC transporter inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 4573273..4573995 Methylobacterium extorquens CM4 7116493 YP_002423035.1 CDS Mchl_4331 NC_011757.1 4573995 4574687 D TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_3963 polar amino acid ABC transporter inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 4573995..4574687 Methylobacterium extorquens CM4 7116494 YP_002423036.1 CDS Mchl_4332 NC_011757.1 4574714 4575490 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3964 ABC transporter; ABC transporter 4574714..4575490 Methylobacterium extorquens CM4 7116495 YP_002423037.1 CDS Mchl_4333 NC_011757.1 4575548 4576489 R PFAM: protein of unknown function DUF606; KEGG: mex:Mext_3965 hypothetical protein; hypothetical protein complement(4575548..4576489) Methylobacterium extorquens CM4 7116496 YP_002423038.1 CDS Mchl_4334 NC_011757.1 4576525 4577793 R PFAM: Arsenical pump membrane protein; citrate transporter; KEGG: mex:Mext_3966 arsenical pump membrane protein; Arsenical pump membrane protein complement(4576525..4577793) Methylobacterium extorquens CM4 7116497 YP_002423039.1 CDS Mchl_4335 NC_011757.1 4578170 4578445 D KEGG: mex:Mext_3967 hypothetical protein; hypothetical protein 4578170..4578445 Methylobacterium extorquens CM4 7116498 YP_002423040.1 CDS Mchl_4336 NC_011757.1 4578778 4579395 R PFAM: propeptide PepSY amd peptidase M4; KEGG: mex:Mext_3968 peptidase; propeptide PepSY amd peptidase M4 complement(4578778..4579395) Methylobacterium extorquens CM4 7116499 YP_002423041.1 CDS Mchl_4337 NC_011757.1 4579656 4580435 D PFAM: NUDIX hydrolase; KEGG: mex:Mext_3969 NUDIX hydrolase; NUDIX hydrolase 4579656..4580435 Methylobacterium extorquens CM4 7116500 YP_002423042.1 CDS Mchl_4338 NC_011757.1 4580437 4581417 D PFAM: band 7 protein; KEGG: mex:Mext_3970 band 7 protein; band 7 protein 4580437..4581417 Methylobacterium extorquens CM4 7116501 YP_002423043.1 CDS Mchl_4339 NC_011757.1 4581429 4582322 D KEGG: mex:Mext_3971 hypothetical protein; hypothetical protein 4581429..4582322 Methylobacterium extorquens CM4 7116502 YP_002423044.1 CDS Mchl_4340 NC_011757.1 4582569 4586651 D TIGRFAM: amino acid adenylation protein; non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; transferase; KEGG: mex:Mext_3972 non-ribosomal peptide synthetase; non-ribosomal peptide synthetase 4582569..4586651 Methylobacterium extorquens CM4 7116503 YP_002423045.1 CDS Mchl_4341 NC_011757.1 4586730 4586942 D KEGG: cch:Cag_1571 hypothetical protein; hypothetical protein 4586730..4586942 Methylobacterium extorquens CM4 7116504 YP_002423046.1 CDS Mchl_4342 NC_011757.1 4586942 4587220 D PFAM: virulence-associated protein D (VapD) conserved region; KEGG: cch:Cag_1570 virulence-associated protein D; virulence-associated protein D 4586942..4587220 Methylobacterium extorquens CM4 7116505 YP_002423047.1 CDS Mchl_4343 NC_011757.1 4587242 4587898 R KEGG: mex:Mext_3975 hypothetical protein; hypothetical protein complement(4587242..4587898) Methylobacterium extorquens CM4 7116506 YP_002423048.1 CDS Mchl_4344 NC_011757.1 4588159 4589331 D PFAM: aminotransferase class V; KEGG: mex:Mext_3976 aminotransferase class V; class V aminotransferase 4588159..4589331 Methylobacterium extorquens CM4 7116507 YP_002423049.1 CDS Mchl_4345 NC_011757.1 4589425 4590894 D TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: mex:Mext_3977 FeS assembly protein SufB; FeS assembly protein SufB 4589425..4590894 Methylobacterium extorquens CM4 7116508 YP_002423050.1 CDS Mchl_4346 NC_011757.1 4591182 4591934 D KEGG: mex:Mext_3978 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; SMART: ATPase AAA; FeS assembly ATPase SufC 4591182..4591934 Methylobacterium extorquens CM4 7116509 YP_002423051.1 CDS Mchl_4347 NC_011757.1 4591934 4593256 D TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: mex:Mext_3979 FeS assembly protein SufD; FeS assembly protein SufD 4591934..4593256 Methylobacterium extorquens CM4 7116510 YP_002423052.1 CDS Mchl_4348 NC_011757.1 4593509 4594765 D TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mex:Mext_3980 SufS subfamily cysteine desulfurase; SufS subfamily cysteine desulfurase 4593509..4594765 Methylobacterium extorquens CM4 7116511 YP_002423053.1 CDS Mchl_4349 NC_011757.1 4594816 4595199 D TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59; KEGG: mex:Mext_3981 FeS assembly SUF system protein; FeS assembly SUF system protein 4594816..4595199 Methylobacterium extorquens CM4 7116512 YP_002423054.1 CDS Mchl_4350 NC_011757.1 4595249 4595854 R PFAM: protein of unknown function DUF820; KEGG: rpe:RPE_4873 protein of unknown function DUF820; hypothetical protein complement(4595249..4595854) Methylobacterium extorquens CM4 7116513 YP_002423055.1 CDS Mchl_4351 NC_011757.1 4596012 4596392 D TIGRFAM: FeS assembly scaffold SufA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: mex:Mext_3982 FeS assembly scaffold SufA; FeS assembly scaffold SufA 4596012..4596392 Methylobacterium extorquens CM4 7116514 YP_002423056.1 CDS Mchl_4352 NC_011757.1 4596489 4597598 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_3983 diguanylate cyclase; diguanylate cyclase complement(4596489..4597598) Methylobacterium extorquens CM4 7116515 YP_002423057.1 CDS Mchl_4353 NC_011757.1 4597793 4599352 R PFAM: helicase; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_3984 DEAD/DEAH box helicase domain-containing protein; DEAD/DEAH box helicase complement(4597793..4599352) Methylobacterium extorquens CM4 7116516 YP_002423058.1 CDS Mchl_4354 NC_011757.1 4599657 4599896 R KEGG: mex:Mext_3985 hypothetical protein; hypothetical protein complement(4599657..4599896) Methylobacterium extorquens CM4 7116517 YP_002423059.1 CDS Mchl_4355 NC_011757.1 4600251 4601117 D PFAM: porin; KEGG: mex:Mext_3986 porin; porin 4600251..4601117 Methylobacterium extorquens CM4 7116518 YP_002423060.1 CDS Mchl_4356 NC_011757.1 4601782 4602186 D KEGG: mex:Mext_3987 hypothetical protein; hypothetical protein 4601782..4602186 Methylobacterium extorquens CM4 7116519 YP_002423061.1 CDS Mchl_4357 NC_011757.1 4602344 4602616 D KEGG: mex:Mext_3988 hypothetical protein; hypothetical protein 4602344..4602616 Methylobacterium extorquens CM4 7116520 YP_002423062.1 CDS Mchl_4358 NC_011757.1 4602679 4603080 D KEGG: mex:Mext_3989 hypothetical protein; hypothetical protein 4602679..4603080 Methylobacterium extorquens CM4 7116521 YP_002423063.1 CDS Mchl_4359 NC_011757.1 4603280 4603570 D KEGG: mex:Mext_3990 hypothetical protein; hypothetical protein 4603280..4603570 Methylobacterium extorquens CM4 7116522 YP_002423064.1 CDS Mchl_4360 NC_011757.1 4603585 4604256 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_3991 HAD family hydrolase; HAD-superfamily hydrolase 4603585..4604256 Methylobacterium extorquens CM4 7116523 YP_002423065.1 CDS Mchl_4361 NC_011757.1 4604404 4604601 D KEGG: mex:Mext_3992 hypothetical protein; hypothetical protein 4604404..4604601 Methylobacterium extorquens CM4 7116524 YP_002423066.1 CDS Mchl_4362 NC_011757.1 4604725 4605417 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_3993 ABC transporter; ABC transporter complement(4604725..4605417) Methylobacterium extorquens CM4 7116525 YP_002423067.1 CDS Mchl_4363 NC_011757.1 4605644 4606294 D PFAM: lipolytic protein G-D-S-L family; KEGG: mex:Mext_3994 GDSL family lipase; G-D-S-L family lipolytic protein 4605644..4606294 Methylobacterium extorquens CM4 7116526 YP_002423068.1 CDS Mchl_4364 NC_011757.1 4606301 4606867 D TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; KEGG: mex:Mext_3995 2'-5' RNA ligase; 2'-5' RNA ligase 4606301..4606867 Methylobacterium extorquens CM4 7116527 YP_002423069.1 CDS Mchl_4365 NC_011757.1 4607145 4607525 D TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: mex:Mext_3996 preprotein translocase, SecE subunit; preprotein translocase subunit SecE 4607145..4607525 Methylobacterium extorquens CM4 7116529 YP_002423070.1 CDS Mchl_4366 NC_011757.1 4607569 4608102 D TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: mpo:Mpop_4478 NusG antitermination factor; NusG antitermination factor 4607569..4608102 Methylobacterium extorquens CM4 7116530 YP_002423071.1 CDS rplK NC_011757.1 4608331 4608780 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 4608331..4608780 Methylobacterium extorquens CM4 7116531 YP_002423072.1 CDS rplA NC_011757.1 4608792 4609490 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 4608792..4609490 Methylobacterium extorquens CM4 7116532 YP_002423073.1 CDS Mchl_4369 NC_011757.1 4609817 4611055 R PFAM: cytochrome P450; KEGG: mex:Mext_4000 cytochrome P450; cytochrome P450 complement(4609817..4611055) Methylobacterium extorquens CM4 7116533 YP_002423074.1 CDS Mchl_4370 NC_011757.1 4611060 4612322 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_4001 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(4611060..4612322) Methylobacterium extorquens CM4 7116534 YP_002423075.1 CDS Mchl_4371 NC_011757.1 4612319 4612540 R KEGG: mex:Mext_4002 ferredoxin protein; ferredoxin protein complement(4612319..4612540) Methylobacterium extorquens CM4 7116535 YP_002423076.1 CDS Mchl_4372 NC_011757.1 4612695 4613780 R PFAM: acyltransferase 3; KEGG: mex:Mext_4003 acyltransferase 3; acyltransferase 3 complement(4612695..4613780) Methylobacterium extorquens CM4 7116536 YP_002423077.1 CDS Mchl_4373 NC_011757.1 4613777 4614760 R PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4004 glycosyl transferase; family 2 glycosyl transferase complement(4613777..4614760) Methylobacterium extorquens CM4 7116537 YP_002423078.1 CDS Mchl_4374 NC_011757.1 4614810 4616624 R TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mex:Mext_4005 aspartyl-tRNA synthetase; aspartyl-tRNA synthetase complement(4614810..4616624) Methylobacterium extorquens CM4 7116538 YP_002423079.1 CDS Mchl_4375 NC_011757.1 4616702 4617709 R KEGG: mex:Mext_4006 biotin synthase; TIGRFAM: biotin synthase; PFAM: radical SAM protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase complement(4616702..4617709) Methylobacterium extorquens CM4 7116539 YP_002423080.1 CDS Mchl_4376 NC_011757.1 4617903 4618289 D KEGG: mex:Mext_4007 hypothetical protein; hypothetical protein 4617903..4618289 Methylobacterium extorquens CM4 7116540 YP_002423081.1 CDS Mchl_4377 NC_011757.1 4618375 4619259 R PFAM: fumarylacetoacetate hydrolase; KEGG: mex:Mext_4008 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase complement(4618375..4619259) Methylobacterium extorquens CM4 7116541 YP_002423082.1 CDS Mchl_4378 NC_011757.1 4619513 4620838 D PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: mex:Mext_4009 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 4619513..4620838 Methylobacterium extorquens CM4 7116542 YP_002423083.1 CDS Mchl_4379 NC_011757.1 4620996 4621796 R PFAM: prephenate dehydrogenase; KEGG: mex:Mext_4010 prephenate dehydrogenase; prephenate dehydrogenase complement(4620996..4621796) Methylobacterium extorquens CM4 7116543 YP_002423084.1 CDS Mchl_4380 NC_011757.1 4622174 4624627 D KEGG: mex:Mext_4011 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC and MHYT sensor-containing diguanylate cyclase/phosphodiesterase 4622174..4624627 Methylobacterium extorquens CM4 7116544 YP_002423085.1 CDS Mchl_4381 NC_011757.1 4624728 4626371 R PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_4012 radical SAM domain-containing protein; radical SAM protein complement(4624728..4626371) Methylobacterium extorquens CM4 7116545 YP_002423086.1 CDS Mchl_4382 NC_011757.1 4627145 4628653 D PFAM: phosphate-selective porin O and P; KEGG: mex:Mext_4013 phosphate-selective porin O and P; phosphate-selective porin O and P 4627145..4628653 Methylobacterium extorquens CM4 7116546 YP_002423087.1 CDS Mchl_4383 NC_011757.1 4628697 4628921 R KEGG: mpo:Mpop_4496 hypothetical protein; hypothetical protein complement(4628697..4628921) Methylobacterium extorquens CM4 7114777 YP_002423088.1 CDS rplJ NC_011757.1 4629521 4630039 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 4629521..4630039 Methylobacterium extorquens CM4 7117698 YP_002423089.1 CDS rplL NC_011757.1 4630097 4630474 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 4630097..4630474 Methylobacterium extorquens CM4 7117699 YP_002423090.1 CDS rpoB NC_011757.1 4630736 4634866 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; subunit beta is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 4630736..4634866 Methylobacterium extorquens CM4 7117700 YP_002423091.1 CDS Mchl_4387 NC_011757.1 4635045 4639262 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 4635045..4639262 Methylobacterium extorquens CM4 7117701 YP_002423092.1 CDS Mchl_4388 NC_011757.1 4639495 4640598 R PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_4019 extracellular solute-binding protein; family 1 extracellular solute-binding protein complement(4639495..4640598) Methylobacterium extorquens CM4 7117702 YP_002423093.1 CDS Mchl_4389 NC_011757.1 4640595 4640954 R PFAM: endoribonuclease L-PSP; KEGG: mex:Mext_4020 endoribonuclease L-PSP; endoribonuclease L-PSP complement(4640595..4640954) Methylobacterium extorquens CM4 7117703 YP_002423094.1 CDS Mchl_4390 NC_011757.1 4641205 4641471 D PFAM: transglycosylase; KEGG: mex:Mext_4021 transglycosylase; transglycosylase 4641205..4641471 Methylobacterium extorquens CM4 7117704 YP_002423095.1 CDS Mchl_4391 NC_011757.1 4641590 4642483 R PFAM: NmrA family protein; KEGG: mex:Mext_4022 NmrA family protein; NmrA family protein complement(4641590..4642483) Methylobacterium extorquens CM4 7117705 YP_002423096.1 CDS Mchl_4392 NC_011757.1 4642561 4643052 D PFAM: helix-turn-helix HxlR type; KEGG: mex:Mext_4023 helix-turn-helix HxlR type; HxlR family transcriptional regulator 4642561..4643052 Methylobacterium extorquens CM4 7117706 YP_002423097.1 CDS Mchl_4393 NC_011757.1 4643109 4643342 R KEGG: mex:Mext_4024 hypothetical protein; hypothetical protein complement(4643109..4643342) Methylobacterium extorquens CM4 7117707 YP_002423098.1 CDS Mchl_4394 NC_011757.1 4643424 4644065 R PFAM: glutathione S-transferase domain; KEGG: mex:Mext_4025 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein complement(4643424..4644065) Methylobacterium extorquens CM4 7117708 YP_002423099.1 CDS Mchl_4395 NC_011757.1 4644158 4646428 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_4026 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(4644158..4646428) Methylobacterium extorquens CM4 7117709 YP_002423100.1 CDS Mchl_4396 NC_011757.1 4646649 4648886 R KEGG: mex:Mext_4027 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase complement(4646649..4648886) Methylobacterium extorquens CM4 7117710 YP_002423101.1 CDS rpsO NC_011757.1 4649156 4649425 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(4649156..4649425) Methylobacterium extorquens CM4 7117711 YP_002423102.1 CDS Mchl_4398 NC_011757.1 4649737 4651203 D PFAM: amino acid permease-associated region; KEGG: mex:Mext_4029 amino acid permease-associated region; amino acid permease-associated protein 4649737..4651203 Methylobacterium extorquens CM4 7117712 YP_002423103.1 CDS Mchl_4399 NC_011757.1 4651266 4651376 R KEGG: mpo:Mpop_4511 hypothetical protein; hypothetical protein complement(4651266..4651376) Methylobacterium extorquens CM4 7117713 YP_002423104.1 CDS Mchl_4400 NC_011757.1 4651446 4652255 R TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_4030 exodeoxyribonuclease III Xth; exodeoxyribonuclease III Xth complement(4651446..4652255) Methylobacterium extorquens CM4 7117714 YP_002423105.1 CDS Mchl_4401 NC_011757.1 4652420 4652866 R PFAM: BLUF domain protein; KEGG: mex:Mext_4031 BLUF domain-containing protein; BLUF domain-containing protein complement(4652420..4652866) Methylobacterium extorquens CM4 7117715 YP_002423106.1 CDS Mchl_4402 NC_011757.1 4652883 4654574 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; hypothetical protein; KEGG: mex:Mext_4032 diguanylate cyclase; diguanylate cyclase/phosphodiesterase complement(4652883..4654574) Methylobacterium extorquens CM4 7117716 YP_002423107.1 CDS Mchl_4403 NC_011757.1 4654793 4655740 R PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: mex:Mext_4033 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA complement(4654793..4655740) Methylobacterium extorquens CM4 7117717 YP_002423108.1 CDS Mchl_4404 NC_011757.1 4655940 4659215 R PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase AAA; KEGG: mex:Mext_4034 cell divisionFtsK/SpoIIIE; cell division FtsK/SpoIIIE complement(4655940..4659215) Methylobacterium extorquens CM4 7117718 YP_002423109.1 CDS nadE NC_011757.1 4659653 4661725 D catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 4659653..4661725 Methylobacterium extorquens CM4 7117719 YP_002423110.1 CDS Mchl_4406 NC_011757.1 4661742 4662206 R LovR from Caulobacter crescentus is a response regulator part of a two-component signaling system that regulates photosensitive bacterial cell-surface and cell-cell attachment; response regulator complement(4661742..4662206) Methylobacterium extorquens CM4 7117720 YP_002423111.1 CDS Mchl_4407 NC_011757.1 4662340 4663440 R KEGG: mex:Mext_4037 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase complement(4662340..4663440) Methylobacterium extorquens CM4 7117721 YP_002423112.1 CDS Mchl_4408 NC_011757.1 4663832 4665280 D PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4038 major facilitator transporter; major facilitator superfamily protein 4663832..4665280 Methylobacterium extorquens CM4 7117722 YP_002423113.1 CDS Mchl_4409 NC_011757.1 4665277 4666203 D KEGG: mex:Mext_4039 hypothetical protein; hypothetical protein 4665277..4666203 Methylobacterium extorquens CM4 7117723 YP_002423114.1 CDS Mchl_4410 NC_011757.1 4666387 4667571 R KEGG: mex:Mext_4040 hypothetical protein; hypothetical protein complement(4666387..4667571) Methylobacterium extorquens CM4 7117724 YP_002423115.1 CDS Mchl_4411 NC_011757.1 4667652 4668257 D PFAM: NnrUfamily protein; KEGG: mex:Mext_4041 NnrU family protein; NnrU family protein 4667652..4668257 Methylobacterium extorquens CM4 7117725 YP_002423116.1 CDS Mchl_4412 NC_011757.1 4668650 4669360 D KEGG: mex:Mext_4042 hypothetical protein; hypothetical protein 4668650..4669360 Methylobacterium extorquens CM4 7117726 YP_002423117.1 CDS engA NC_011757.1 4669447 4670787 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 4669447..4670787 Methylobacterium extorquens CM4 7117727 YP_002423118.1 CDS Mchl_4414 NC_011757.1 4670955 4671857 D PFAM: protein of unknown function DUF81; KEGG: mex:Mext_4044 hypothetical protein; hypothetical protein 4670955..4671857 Methylobacterium extorquens CM4 7117728 YP_002423119.1 CDS Mchl_4415 NC_011757.1 4671861 4672985 R PFAM: glutamate--cysteine ligase; KEGG: mex:Mext_4045 glutamate--cysteine ligase; glutamate--cysteine ligase complement(4671861..4672985) Methylobacterium extorquens CM4 7117729 YP_002423120.1 CDS Mchl_4416 NC_011757.1 4673226 4674125 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 4673226..4674125 Methylobacterium extorquens CM4 7117730 YP_002423121.1 CDS Mchl_4417 NC_011757.1 4674346 4674549 D KEGG: mex:Mext_4047 hypothetical protein; hypothetical protein 4674346..4674549 Methylobacterium extorquens CM4 7117731 YP_002423122.1 CDS Mchl_4418 NC_011757.1 4674692 4675156 D PFAM: protein of unknown function UPF0074; KEGG: mex:Mext_4048 hypothetical protein; BadM/Rrf2 family transcriptional regulator 4674692..4675156 Methylobacterium extorquens CM4 7117732 YP_002423123.1 CDS Mchl_4419 NC_011757.1 4675146 4676054 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_4049 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4675146..4676054 Methylobacterium extorquens CM4 7117733 YP_002423124.1 CDS Mchl_4420 NC_011757.1 4676349 4677908 D PFAM: beta-lactamase; KEGG: mex:Mext_4050 beta-lactamase; beta-lactamase 4676349..4677908 Methylobacterium extorquens CM4 7117734 YP_002423125.1 CDS Mchl_4421 NC_011757.1 4678000 4680351 R KEGG: mex:Mext_4051 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase complement(4678000..4680351) Methylobacterium extorquens CM4 7117735 YP_002423126.1 CDS Mchl_4422 NC_011757.1 4680457 4681185 R KEGG: mex:Mext_4052 glutathione S-transferase-like protein; glutathione S-transferase-like protein complement(4680457..4681185) Methylobacterium extorquens CM4 7117736 YP_002423127.1 CDS Mchl_4423 NC_011757.1 4681205 4681882 R PFAM: protein of unknown function DUF937; KEGG: mex:Mext_4053 hypothetical protein; hypothetical protein complement(4681205..4681882) Methylobacterium extorquens CM4 7117737 YP_002423128.1 CDS Mchl_4424 NC_011757.1 4681972 4682268 R KEGG: mex:Mext_4054 hypothetical protein; hypothetical protein complement(4681972..4682268) Methylobacterium extorquens CM4 7117738 YP_002423129.1 CDS Mchl_4425 NC_011757.1 4682386 4685136 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-subunit beta is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(4682386..4685136) Methylobacterium extorquens CM4 7117739 YP_002423130.1 CDS Mchl_4426 NC_011757.1 4685346 4686254 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpo:Mpop_4540 LysR family transcriptional regulator; LysR family transcriptional regulator complement(4685346..4686254) Methylobacterium extorquens CM4 7117740 YP_002423131.1 CDS Mchl_4427 NC_011757.1 4686376 4686771 D PFAM: DoxX family protein; KEGG: mex:Mext_4059 DoxX family protein; DoxX family protein 4686376..4686771 Methylobacterium extorquens CM4 7117741 YP_002423132.1 CDS Mchl_4428 NC_011757.1 4686797 4687279 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_4060 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4686797..4687279 Methylobacterium extorquens CM4 7117742 YP_002423133.1 CDS Mchl_4429 NC_011757.1 4687358 4688035 D KEGG: mex:Mext_4061 hypothetical protein; hypothetical protein 4687358..4688035 Methylobacterium extorquens CM4 7117743 YP_002423134.1 CDS Mchl_4430 NC_011757.1 4688022 4688465 D KEGG: mex:Mext_4062 hypothetical protein; hypothetical protein 4688022..4688465 Methylobacterium extorquens CM4 7117744 YP_002423135.1 CDS Mchl_4431 NC_011757.1 4688537 4689247 D catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 4688537..4689247 Methylobacterium extorquens CM4 7117745 YP_002423136.1 CDS Mchl_4432 NC_011757.1 4689274 4689861 D PFAM: ankyrin; KEGG: mex:Mext_4065 ankyrin; ankyrin 4689274..4689861 Methylobacterium extorquens CM4 7117746 YP_002423137.1 CDS Mchl_4433 NC_011757.1 4689949 4691454 D TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: mex:Mext_4066 glycerol kinase; glycerol kinase 4689949..4691454 Methylobacterium extorquens CM4 7117747 YP_002423138.1 CDS Mchl_4434 NC_011757.1 4691454 4692617 D PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_4067 hypothetical protein; hypothetical protein 4691454..4692617 Methylobacterium extorquens CM4 7117748 YP_002423139.1 CDS Mchl_4435 NC_011757.1 4692823 4694508 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4068 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4692823..4694508 Methylobacterium extorquens CM4 7117749 YP_002423140.1 CDS Mchl_4436 NC_011757.1 4694562 4695323 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: mex:Mext_4069 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(4694562..4695323) Methylobacterium extorquens CM4 7117750 YP_002423141.1 CDS Mchl_4437 NC_011757.1 4695320 4695793 R PFAM: endoribonuclease L-PSP; KEGG: mex:Mext_4070 endoribonuclease L-PSP; endoribonuclease L-PSP complement(4695320..4695793) Methylobacterium extorquens CM4 7117751 YP_002423142.1 CDS Mchl_4438 NC_011757.1 4695873 4698044 R PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: mex:Mext_4071 ABC transporter; ABC transporter complement(4695873..4698044) Methylobacterium extorquens CM4 7117752 YP_002423143.1 CDS Mchl_4439 NC_011757.1 4698041 4699330 R KEGG: mex:Mext_4072 secretion protein HlyD family protein; secretion protein HlyD complement(4698041..4699330) Methylobacterium extorquens CM4 7117753 YP_002423144.1 CDS Mchl_4440 NC_011757.1 4699807 4700019 D KEGG: mpo:Mpop_4554 hypothetical protein; hypothetical protein 4699807..4700019 Methylobacterium extorquens CM4 7117754 YP_002423145.1 CDS Mchl_4441 NC_011757.1 4700365 4701267 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_4074 helix-turn-helix domain-containing protein; AraC family transcriptional regulator 4700365..4701267 Methylobacterium extorquens CM4 7117755 YP_002423146.1 CDS Mchl_4442 NC_011757.1 4701481 4702671 D TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mex:Mext_4075 acetylornithine and succinylornithine aminotransferase; acetylornithine and succinylornithine aminotransferase 4701481..4702671 Methylobacterium extorquens CM4 7117756 YP_002423147.1 CDS Mchl_4443 NC_011757.1 4702700 4703650 D TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: mex:Mext_4076 ornithine carbamoyltransferase; ornithine carbamoyltransferase 4702700..4703650 Methylobacterium extorquens CM4 7117757 YP_002423148.1 CDS Mchl_4444 NC_011757.1 4703709 4703948 R KEGG: mex:Mext_1752 hypothetical protein; hypothetical protein complement(4703709..4703948) Methylobacterium extorquens CM4 7117758 YP_002423149.1 CDS Mchl_4445 NC_011757.1 4704107 4704574 R PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: mex:Mext_4077 activator of HSP90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein complement(4704107..4704574) Methylobacterium extorquens CM4 7117759 YP_002423150.1 CDS Mchl_4446 NC_011757.1 4704594 4705016 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: mex:Mext_4078 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(4704594..4705016) Methylobacterium extorquens CM4 7117760 YP_002423151.1 CDS Mchl_4447 NC_011757.1 4705302 4706108 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4079 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4705302..4706108 Methylobacterium extorquens CM4 7117761 YP_002423152.1 CDS Mchl_4448 NC_011757.1 4706112 4707494 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: mex:Mext_4080 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4706112..4707494 Methylobacterium extorquens CM4 7117762 YP_002423153.1 CDS Mchl_4449 NC_011757.1 4707718 4710345 D PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; Phytochrome central region domain protein; PAS fold-2 domain protein; PAS fold domain protein; KEGG: mex:Mext_4081 histidine kinase dimerisation/phosphoacceptor; multi-sensor signal transduction histidine kinase 4707718..4710345 Methylobacterium extorquens CM4 7117763 YP_002423154.1 CDS Mchl_4450 NC_011757.1 4710353 4710910 D PFAM: Haem oxygenase-like; KEGG: mex:Mext_4082 heme oxygenase; heme oxygenase-like protein 4710353..4710910 Methylobacterium extorquens CM4 7117764 YP_002423155.1 CDS Mchl_4451 NC_011757.1 4710973 4712136 R KEGG: mex:Mext_4083 hypothetical protein; hypothetical protein complement(4710973..4712136) Methylobacterium extorquens CM4 7117765 YP_002423156.1 CDS Mchl_4452 NC_011757.1 4712129 4712623 R KEGG: mex:Mext_4084 hypothetical protein; hypothetical protein complement(4712129..4712623) Methylobacterium extorquens CM4 7117766 YP_002423157.1 CDS Mchl_4453 NC_011757.1 4712879 4714225 D KEGG: mex:Mext_4085 capsule polysaccharide export protein-like protein; capsule polysaccharide export protein-like protein 4712879..4714225 Methylobacterium extorquens CM4 7117767 YP_002423158.1 CDS Mchl_4454 NC_011757.1 4714380 4714664 D KEGG: mex:Mext_4086 hypothetical protein; hypothetical protein 4714380..4714664 Methylobacterium extorquens CM4 7117768 YP_002423159.1 CDS Mchl_4455 NC_011757.1 4714856 4715836 D KEGG: mex:Mext_4087 hypothetical protein; hypothetical protein 4714856..4715836 Methylobacterium extorquens CM4 7117769 YP_002423160.1 CDS Mchl_4456 NC_011757.1 4715869 4717242 R PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: mex:Mext_4088 sigma-54 factor interaction domain-containing protein; Fis family transcriptional regulator complement(4715869..4717242) Methylobacterium extorquens CM4 7117770 YP_002423161.1 CDS Mchl_4457 NC_011757.1 4717396 4717743 R TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: mex:Mext_4089 flagellar motor switch protein FliN; flagellar motor switch protein FliN complement(4717396..4717743) Methylobacterium extorquens CM4 7117771 YP_002423162.1 CDS fliH NC_011757.1 4717749 4718375 R binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H complement(4717749..4718375) Methylobacterium extorquens CM4 7117772 YP_002423163.1 CDS fliG NC_011757.1 4718372 4719427 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(4718372..4719427) Methylobacterium extorquens CM4 7117773 YP_002423164.1 CDS fliF NC_011757.1 4719471 4721093 R the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein complement(4719471..4721093) Methylobacterium extorquens CM4 7117774 YP_002423165.1 CDS Mchl_4461 NC_011757.1 4721354 4721629 R PFAM: protein of unknown function DUF1153; KEGG: mex:Mext_4093 hypothetical protein; hypothetical protein complement(4721354..4721629) Methylobacterium extorquens CM4 7117775 YP_002423166.1 CDS Mchl_4462 NC_011757.1 4721771 4722451 R PFAM: flagellar hook capping protein; KEGG: mex:Mext_4094 flagellar hook capping protein; flagellar hook capping protein complement(4721771..4722451) Methylobacterium extorquens CM4 7117776 YP_002423167.1 CDS Mchl_4463 NC_011757.1 4722461 4723852 R PFAM: flagellar hook-length control protein; KEGG: mex:Mext_4095 flagellar hook-length control protein; flagellar hook-length control protein complement(4722461..4723852) Methylobacterium extorquens CM4 7117777 YP_002423168.1 CDS mnmA NC_011757.1 4724111 4725343 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 4724111..4725343 Methylobacterium extorquens CM4 7117778 YP_002423169.1 CDS Mchl_4465 NC_011757.1 4725599 4726255 D PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_4097 phosphatidylethanolamine N-methyltransferase; phosphatidylethanolamine N-methyltransferase 4725599..4726255 Methylobacterium extorquens CM4 7118145 YP_002423170.1 CDS Mchl_4466 NC_011757.1 4726294 4727142 D PFAM: hypothetical protein; KEGG: mex:Mext_4098 hypothetical protein; hypothetical protein 4726294..4727142 Methylobacterium extorquens CM4 7118431 YP_002423171.1 CDS Mchl_4467 NC_011757.1 4727316 4728800 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: mex:Mext_4099 ATPase domain-containing protein; histidine kinase 4727316..4728800 Methylobacterium extorquens CM4 7118432 YP_002423172.1 CDS Mchl_4468 NC_011757.1 4728865 4729605 R PFAM: carbonic anhydrase; KEGG: mex:Mext_4100 carbonic anhydrase; carbonic anhydrase complement(4728865..4729605) Methylobacterium extorquens CM4 7118433 YP_002423173.1 CDS Mchl_4469 NC_011757.1 4729914 4731491 R TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4101 EmrB/QacA family drug resistance transporter; EmrB/QacA subfamily drug resistance transporter complement(4729914..4731491) Methylobacterium extorquens CM4 7118434 YP_002423174.1 CDS Mchl_4470 NC_011757.1 4731703 4732908 R PFAM: secretion protein HlyD; KEGG: mex:Mext_4102 secretion protein HlyD; secretion protein HlyD complement(4731703..4732908) Methylobacterium extorquens CM4 7118435 YP_002423175.1 CDS Mchl_4471 NC_011757.1 4733049 4733711 D PFAM: regulatory protein TetR; KEGG: mex:Mext_4103 regulatory protein TetR; TetR family transcriptional regulator 4733049..4733711 Methylobacterium extorquens CM4 7118436 YP_002423176.1 CDS Mchl_4472 NC_011757.1 4733718 4735481 R PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_4104 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain-containing protein complement(4733718..4735481) Methylobacterium extorquens CM4 7118437 YP_002423177.1 CDS Mchl_4473 NC_011757.1 4735591 4736580 D TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: mex:Mext_4105 SUA5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 4735591..4736580 Methylobacterium extorquens CM4 7118438 YP_002423178.1 CDS Mchl_4474 NC_011757.1 4736624 4737220 R KEGG: mex:Mext_4106 hypothetical protein; hypothetical protein complement(4736624..4737220) Methylobacterium extorquens CM4 7118439 YP_002423179.1 CDS Mchl_4475 NC_011757.1 4737488 4739251 R KEGG: mex:Mext_4107 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase complement(4737488..4739251) Methylobacterium extorquens CM4 7118440 YP_002423180.1 CDS Mchl_4476 NC_011757.1 4739241 4739576 R PFAM: KaiB domain protein; KEGG: mex:Mext_4108 KaiB domain-containing protein; KaiB domain-containing protein complement(4739241..4739576) Methylobacterium extorquens CM4 7118441 YP_002423181.1 CDS Mchl_4477 NC_011757.1 4739573 4739965 R PFAM: KaiB domain protein; KEGG: mex:Mext_4109 KaiB domain-containing protein; KaiB domain-containing protein complement(4739573..4739965) Methylobacterium extorquens CM4 7118442 YP_002423182.1 CDS Mchl_4478 NC_011757.1 4739962 4741689 R acts as a promotor non-specific transcription repressor; circadian clock protein KaiC complement(4739962..4741689) Methylobacterium extorquens CM4 7118443 YP_002423183.1 CDS Mchl_4479 NC_011757.1 4741679 4741909 R KEGG: mex:Mext_4111 hypothetical protein; hypothetical protein complement(4741679..4741909) Methylobacterium extorquens CM4 7118444 YP_002423184.1 CDS Mchl_4480 NC_011757.1 4742106 4742492 D PFAM: response regulator receiver; KEGG: mex:Mext_4112 response regulator receiver; response regulator receiver protein 4742106..4742492 Methylobacterium extorquens CM4 7118445 YP_002423185.1 CDS Mchl_4481 NC_011757.1 4742515 4743861 R PFAM: ATP-binding region ATPase domain protein; KEGG: mex:Mext_4113 ATPase domain-containing protein; histidine kinase complement(4742515..4743861) Methylobacterium extorquens CM4 7118446 YP_002423186.1 CDS Mchl_4482 NC_011757.1 4743858 4744523 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_4114 response regulator receiver; transcriptional regulator complement(4743858..4744523) Methylobacterium extorquens CM4 7118447 YP_002423187.1 CDS Mchl_4483 NC_011757.1 4744548 4744880 R KEGG: mex:Mext_4115 hypothetical protein; hypothetical protein complement(4744548..4744880) Methylobacterium extorquens CM4 7118448 YP_002423188.1 CDS Mchl_4484 NC_011757.1 4745047 4745682 D SMART: nuclease (SNase domain protein); KEGG: mex:Mext_4116 nuclease; nuclease 4745047..4745682 Methylobacterium extorquens CM4 7118449 YP_002423189.1 CDS Mchl_4485 NC_011757.1 4745698 4745991 R KEGG: mex:Mext_4117 hypothetical protein; hypothetical protein complement(4745698..4745991) Methylobacterium extorquens CM4 7118450 YP_002423190.1 CDS Mchl_4486 NC_011757.1 4745991 4746341 R KEGG: mex:Mext_4118 iron uptake protein; iron uptake protein complement(4745991..4746341) Methylobacterium extorquens CM4 7118451 YP_002423191.1 CDS Mchl_4487 NC_011757.1 4746338 4747930 R KEGG: mex:Mext_4119 PepSY-associated TM helix domain-containing protein; PepSY-associated TM helix domain-containing protein complement(4746338..4747930) Methylobacterium extorquens CM4 7118452 YP_002423192.1 CDS Mchl_4488 NC_011757.1 4747927 4748241 R KEGG: mex:Mext_4120 iron uptake protein; iron uptake protein complement(4747927..4748241) Methylobacterium extorquens CM4 7118453 YP_002423193.1 CDS Mchl_4489 NC_011757.1 4748251 4750608 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_4121 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(4748251..4750608) Methylobacterium extorquens CM4 7118454 YP_002423194.1 CDS Mchl_4490 NC_011757.1 4750850 4751128 R KEGG: mex:Mext_4122 hypothetical protein; hypothetical protein complement(4750850..4751128) Methylobacterium extorquens CM4 7118455 YP_002423195.1 CDS Mchl_4491 NC_011757.1 4751775 4751966 D KEGG: mpo:Mpop_4605 hypothetical protein; hypothetical protein 4751775..4751966 Methylobacterium extorquens CM4 7118456 YP_002423196.1 CDS Mchl_4492 NC_011757.1 4752482 4758043 D KEGG: mex:Mext_4124 hypothetical protein; hypothetical protein 4752482..4758043 Methylobacterium extorquens CM4 7118457 YP_002423197.1 CDS Mchl_4493 NC_011757.1 4758121 4759644 D PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: mex:Mext_4125 phosphoglucomutase/phosphomannomutase alpha/beta/subunit; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 4758121..4759644 Methylobacterium extorquens CM4 7118458 YP_002423198.1 CDS Mchl_4494 NC_011757.1 4760054 4761547 D PFAM: Hemolysin-type calcium-binding region; KEGG: mex:Mext_4126 hemolysin-type calcium-binding region; hemolysin-type calcium-binding region 4760054..4761547 Methylobacterium extorquens CM4 7118459 YP_002423199.1 CDS Mchl_4495 NC_011757.1 4761924 4763351 D PFAM: Hemolysin-type calcium-binding region; KEGG: mex:Mext_4127 hemolysin-type calcium-binding region; hemolysin-type calcium-binding region 4761924..4763351 Methylobacterium extorquens CM4 7118460 YP_002423200.1 CDS Mchl_4496 NC_011757.1 4763505 4763762 R KEGG: mex:Mext_4128 hypothetical protein; hypothetical protein complement(4763505..4763762) Methylobacterium extorquens CM4 7118461 YP_002423201.1 CDS Mchl_4497 NC_011757.1 4763762 4765966 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: mex:Mext_4129 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein complement(4763762..4765966) Methylobacterium extorquens CM4 7118462 YP_002423202.1 CDS Mchl_4498 NC_011757.1 4766037 4767560 R KEGG: mex:Mext_4130 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase complement(4766037..4767560) Methylobacterium extorquens CM4 7118463 YP_002423203.1 CDS Mchl_4499 NC_011757.1 4767621 4768622 R PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: mex:Mext_4131 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(4767621..4768622) Methylobacterium extorquens CM4 7118464 YP_002423204.1 CDS Mchl_4500 NC_011757.1 4769001 4769780 R KEGG: mex:Mext_4132 WecB/TagA/CpsF family glycosyl transferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase complement(4769001..4769780) Methylobacterium extorquens CM4 7118465 YP_002423205.1 CDS Mchl_4501 NC_011757.1 4769777 4770778 R PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_4133 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(4769777..4770778) Methylobacterium extorquens CM4 7118466 YP_002423206.1 CDS Mchl_4502 NC_011757.1 4771235 4772602 D PFAM: polysaccharide export protein; KEGG: mex:Mext_4134 polysaccharide export protein; polysaccharide export protein 4771235..4772602 Methylobacterium extorquens CM4 7118467 YP_002423207.1 CDS Mchl_4503 NC_011757.1 4772655 4774064 D KEGG: mex:Mext_4135 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4772655..4774064 Methylobacterium extorquens CM4 7118468 YP_002423208.1 CDS Mchl_4504 NC_011757.1 4774074 4774463 D KEGG: mex:Mext_4136 hypothetical protein; hypothetical protein 4774074..4774463 Methylobacterium extorquens CM4 7118469 YP_002423209.1 CDS Mchl_4505 NC_011757.1 4774647 4775324 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_4137 response regulator receiver; LuxR family transcriptional regulator complement(4774647..4775324) Methylobacterium extorquens CM4 7118470 YP_002423210.1 CDS Mchl_4506 NC_011757.1 4775321 4775908 R KEGG: mex:Mext_4138 hypothetical protein; hypothetical protein complement(4775321..4775908) Methylobacterium extorquens CM4 7118471 YP_002423211.1 CDS Mchl_4507 NC_011757.1 4775905 4776849 R TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein; KEGG: mex:Mext_4139 YVTN beta-propeller repeat-containing protein; 40-residue YVTN family beta-propeller repeat-containing protein complement(4775905..4776849) Methylobacterium extorquens CM4 7118472 YP_002423212.1 CDS Mchl_4508 NC_011757.1 4776874 4777404 R KEGG: mex:Mext_4140 MxaD protein; MxaD protein complement(4776874..4777404) Methylobacterium extorquens CM4 7118473 YP_002423213.1 CDS Mchl_4509 NC_011757.1 4777404 4778399 R SMART: von Willebrand factor type A; KEGG: mex:Mext_4141 von Willebrand factor type A; von Willebrand factor type A complement(4777404..4778399) Methylobacterium extorquens CM4 7118474 YP_002423214.1 CDS Mchl_4510 NC_011757.1 4778396 4779022 R KEGG: mex:Mext_4142 hypothetical protein; hypothetical protein complement(4778396..4779022) Methylobacterium extorquens CM4 7118475 YP_002423215.1 CDS Mchl_4511 NC_011757.1 4779022 4780089 R SMART: von Willebrand factor type A; KEGG: mex:Mext_4143 von Willebrand factor type A; von Willebrand factor type A complement(4779022..4780089) Methylobacterium extorquens CM4 7118476 YP_002423216.1 CDS Mchl_4512 NC_011757.1 4780094 4781017 R KEGG: mex:Mext_4144 MxaA protein; MxaA protein complement(4780094..4781017) Methylobacterium extorquens CM4 7118477 YP_002423217.1 CDS Mchl_4513 NC_011757.1 4781023 4781892 R KEGG: mex:Mext_4145 hypothetical protein; hypothetical protein complement(4781023..4781892) Methylobacterium extorquens CM4 7118478 YP_002423218.1 CDS Mchl_4514 NC_011757.1 4781889 4782920 R PFAM: ATPase associated with various cellular activities AAA_3; ATPase AAA; SMART: AAA ATPase; KEGG: mex:Mext_4146 ATPase; ATPase AAA complement(4781889..4782920) Methylobacterium extorquens CM4 7118479 YP_002423219.1 CDS Mchl_4515 NC_011757.1 4783069 4783359 R PFAM: methanol dehydrogenase subunit beta; KEGG: mex:Mext_4147 methanol dehydrogenase subunit beta; methanol dehydrogenase subunit beta complement(4783069..4783359) Methylobacterium extorquens CM4 7118480 YP_002423220.1 CDS Mchl_4516 NC_011757.1 4783465 4784058 R PFAM: cytochrome C class I; KEGG: mex:Mext_4148 cytochrome c class I; cytochrome C class I complement(4783465..4784058) Methylobacterium extorquens CM4 7118481 YP_002423221.1 CDS Mchl_4517 NC_011757.1 4784201 4785103 R PFAM: extracellular solute-binding protein family 3; KEGG: mex:Mext_4149 extracellular solute-binding protein; family 3 extracellular solute-binding protein complement(4784201..4785103) Methylobacterium extorquens CM4 7118482 YP_002423222.1 CDS Mchl_4518 NC_011757.1 4785368 4787248 R TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: pyrrolo-quinoline quinone; KEGG: mex:Mext_4150 methanol/ethanol family PQQ-dependent dehydrogenase; methanol/ethanol family PQQ-dependent dehydrogenase complement(4785368..4787248) Methylobacterium extorquens CM4 7118483 YP_002423223.1 CDS Mchl_4519 NC_011757.1 4787619 4788524 D KEGG: mex:Mext_4151 hypothetical protein; hypothetical protein 4787619..4788524 Methylobacterium extorquens CM4 7118484 YP_002423224.1 CDS Mchl_4520 NC_011757.1 4788674 4788871 D KEGG: mex:Mext_4152 hypothetical protein; hypothetical protein 4788674..4788871 Methylobacterium extorquens CM4 7118485 YP_002423225.1 CDS Mchl_4521 NC_011757.1 4788901 4789635 R KEGG: mex:Mext_4153 hypothetical protein; hypothetical protein complement(4788901..4789635) Methylobacterium extorquens CM4 7118486 YP_002423226.1 CDS Mchl_4522 NC_011757.1 4789954 4790853 D PFAM: beta-lactamase; KEGG: mex:Mext_4154 beta-lactamase domain-containing protein; beta-lactamase 4789954..4790853 Methylobacterium extorquens CM4 7118487 YP_002423227.1 CDS Mchl_4523 NC_011757.1 4790865 4791392 D KEGG: mex:Mext_4155 hypothetical protein; hypothetical protein 4790865..4791392 Methylobacterium extorquens CM4 7118488 YP_002423228.1 CDS Mchl_4524 NC_011757.1 4791389 4791568 D KEGG: mpo:Mpop_4638 hypothetical protein; hypothetical protein 4791389..4791568 Methylobacterium extorquens CM4 7118489 YP_002423229.1 CDS Mchl_4525 NC_011757.1 4791787 4793172 D TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; nucleotidyl transferase; KEGG: mex:Mext_4156 UDP-N-acetylglucosamine pyrophosphorylase; UDP-N-acetylglucosamine pyrophosphorylase 4791787..4793172 Methylobacterium extorquens CM4 7118490 YP_002423230.1 CDS Mchl_4526 NC_011757.1 4793357 4795183 D TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: mex:Mext_4157 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; glucosamine/fructose-6-phosphate aminotransferase 4793357..4795183 Methylobacterium extorquens CM4 7118491 YP_002423231.1 CDS Mchl_4527 NC_011757.1 4795245 4795679 R PFAM: protein of unknown function DUF336; KEGG: mex:Mext_4158 hypothetical protein; hypothetical protein complement(4795245..4795679) Methylobacterium extorquens CM4 7118492 YP_002423232.1 CDS Mchl_4528 NC_011757.1 4795861 4796706 D PFAM: protein of unknown function DUF502; KEGG: mex:Mext_4159 hypothetical protein; hypothetical protein 4795861..4796706 Methylobacterium extorquens CM4 7118493 YP_002423233.1 CDS Mchl_4529 NC_011757.1 4796729 4797055 R KEGG: mex:Mext_4160 hypothetical protein; hypothetical protein complement(4796729..4797055) Methylobacterium extorquens CM4 7118494 YP_002423234.1 CDS Mchl_4530 NC_011757.1 4797411 4799600 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(4797411..4799600) Methylobacterium extorquens CM4 7118495 YP_002423235.1 CDS Mchl_4531 NC_011757.1 4799792 4800088 D PFAM: protein of unknown function DUF339; KEGG: mex:Mext_4162 hypothetical protein; hypothetical protein 4799792..4800088 Methylobacterium extorquens CM4 7118496 YP_002423236.1 CDS Mchl_4532 NC_011757.1 4800302 4803892 D KEGG: mex:Mext_4163 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase; SMART: DEAD-like helicases; transcription-repair coupling factor 4800302..4803892 Methylobacterium extorquens CM4 7118497 YP_002423237.1 CDS Mchl_4533 NC_011757.1 4804269 4804478 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_4164 cold-shock protein DNA-binding; cold-shock DNA-binding domain-containing protein 4804269..4804478 Methylobacterium extorquens CM4 7118498 YP_002423238.1 CDS Mchl_4534 NC_011757.1 4804581 4804949 D KEGG: mex:Mext_4165 hypothetical protein; hypothetical protein 4804581..4804949 Methylobacterium extorquens CM4 7118499 YP_002423239.1 CDS Mchl_4535 NC_011757.1 4805128 4805325 D KEGG: mex:Mext_4166 hypothetical protein; hypothetical protein 4805128..4805325 Methylobacterium extorquens CM4 7118500 YP_002423240.1 CDS Mchl_4536 NC_011757.1 4805392 4805733 R KEGG: mpo:Mpop_4680 hypothetical protein; hypothetical protein complement(4805392..4805733) Methylobacterium extorquens CM4 7118501 YP_002423241.1 CDS Mchl_4537 NC_011757.1 4805992 4807392 R KEGG: mex:Mext_4168 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein; acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein complement(4805992..4807392) Methylobacterium extorquens CM4 7118502 YP_002423242.1 CDS Mchl_4538 NC_011757.1 4807690 4808943 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_4169 ATPase domain-containing protein; histidine kinase 4807690..4808943 Methylobacterium extorquens CM4 7118503 YP_002423243.1 CDS Mchl_4539 NC_011757.1 4809144 4809506 D PFAM: response regulator receiver; KEGG: mex:Mext_4170 response regulator receiver; response regulator receiver protein 4809144..4809506 Methylobacterium extorquens CM4 7118504 YP_002423244.1 CDS Mchl_4540 NC_011757.1 4809562 4811193 R PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_4171 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(4809562..4811193) Methylobacterium extorquens CM4 7118505 YP_002423245.1 CDS Mchl_4541 NC_011757.1 4811332 4811526 R KEGG: mpo:Mpop_4685 hypothetical protein; hypothetical protein complement(4811332..4811526) Methylobacterium extorquens CM4 7118506 YP_002423246.1 CDS Mchl_4542 NC_011757.1 4811776 4813584 D PFAM: glycosyl transferase family 39; KEGG: mex:Mext_4173 glycosyl transferase; glycosyl transferase family protein 4811776..4813584 Methylobacterium extorquens CM4 7118507 YP_002423247.1 CDS Mchl_4543 NC_011757.1 4813581 4814354 D PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4174 glycosyl transferase; family 2 glycosyl transferase 4813581..4814354 Methylobacterium extorquens CM4 7118508 YP_002423248.1 CDS Mchl_4544 NC_011757.1 4814359 4814688 D PFAM: lipid A biosynthesis domain protein; KEGG: mex:Mext_4175 lipid A biosynthesis domain-containing protein; lipid A biosynthesis domain-containing protein 4814359..4814688 Methylobacterium extorquens CM4 7118509 YP_002423249.1 CDS Mchl_4545 NC_011757.1 4814704 4815171 D KEGG: mex:Mext_4176 hypothetical protein; hypothetical protein 4814704..4815171 Methylobacterium extorquens CM4 7118510 YP_002423250.1 CDS Mchl_4546 NC_011757.1 4815172 4816683 R KEGG: mex:Mext_4177 cyclohexanone monooxygenase; cyclohexanone monooxygenase complement(4815172..4816683) Methylobacterium extorquens CM4 7118511 YP_002423251.1 CDS Mchl_4547 NC_011757.1 4816680 4817594 R PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: mex:Mext_4178 alpha/beta hydrolase domain-containing protein; alpha/beta hydrolase fold-3 domain-containing protein complement(4816680..4817594) Methylobacterium extorquens CM4 7116961 YP_002423252.1 CDS Mchl_4548 NC_011757.1 4817597 4818421 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4179 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4817597..4818421) Methylobacterium extorquens CM4 7117943 YP_002423253.1 CDS Mchl_4549 NC_011757.1 4818429 4819925 R PFAM: protein of unknown function UPF0061; KEGG: mex:Mext_4180 hypothetical protein; hypothetical protein complement(4818429..4819925) Methylobacterium extorquens CM4 7117944 YP_002423254.1 CDS Mchl_4550 NC_011757.1 4820033 4820272 D PFAM: protein of unknown function DUF433; KEGG: mpo:Mpop_4945 protein of unknown function DUF433; hypothetical protein 4820033..4820272 Methylobacterium extorquens CM4 7117945 YP_002423255.1 CDS Mchl_4551 NC_011757.1 4820279 4820680 D KEGG: rrs:RoseRS_0674 hypothetical protein; hypothetical protein 4820279..4820680 Methylobacterium extorquens CM4 7117946 YP_002423256.1 CDS Mchl_4552 NC_011757.1 4820628 4821629 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_4181 hypothetical protein; hypothetical protein 4820628..4821629 Methylobacterium extorquens CM4 7117947 YP_002423257.1 CDS Mchl_4553 NC_011757.1 4821911 4822966 D PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: mex:Mext_4182 histidine kinase dimerisation/phosphoacceptor; signal transduction histidine kinase 4821911..4822966 Methylobacterium extorquens CM4 7117948 YP_002423258.1 CDS Mchl_4554 NC_011757.1 4823327 4824130 D PFAM: lipolytic protein G-D-S-L family; KEGG: mex:Mext_4183 GDSL family lipase; G-D-S-L family lipolytic protein 4823327..4824130 Methylobacterium extorquens CM4 7117949 YP_002423259.1 CDS Mchl_4555 NC_011757.1 4824198 4824590 D KEGG: mex:Mext_4184 hypothetical protein; hypothetical protein 4824198..4824590 Methylobacterium extorquens CM4 7117950 YP_002423260.1 CDS Mchl_4556 NC_011757.1 4824699 4825517 R KEGG: mex:Mext_4185 beta-lactamase-like protein; beta-lactamase-like protein complement(4824699..4825517) Methylobacterium extorquens CM4 7117951 YP_002423261.1 CDS Mchl_4557 NC_011757.1 4825534 4826331 R TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: mex:Mext_4186 TatD family hydrolase; hydrolase, TatD family complement(4825534..4826331) Methylobacterium extorquens CM4 7117952 YP_002423262.1 CDS Mchl_4558 NC_011757.1 4826381 4827949 R TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); KEGG: mex:Mext_4187 methionyl-tRNA synthetase; methionyl-tRNA synthetase complement(4826381..4827949) Methylobacterium extorquens CM4 7117953 YP_002423263.1 CDS Mchl_4559 NC_011757.1 4828175 4828390 R KEGG: mex:Mext_4188 hypothetical protein; hypothetical protein complement(4828175..4828390) Methylobacterium extorquens CM4 7117954 YP_002423264.1 CDS Mchl_4560 NC_011757.1 4828688 4828888 D KEGG: mex:Mext_4189 hypothetical protein; hypothetical protein 4828688..4828888 Methylobacterium extorquens CM4 7117955 YP_002423265.1 CDS Mchl_4561 NC_011757.1 4828936 4830018 R KEGG: mex:Mext_4190 DNA-directed DNA polymerase; DNA-directed DNA polymerase complement(4828936..4830018) Methylobacterium extorquens CM4 7117956 YP_002423266.1 CDS Mchl_4562 NC_011757.1 4830008 4830742 R PFAM: thymidylate kinase; KEGG: mex:Mext_4191 dTMP kinase; dTMP kinase complement(4830008..4830742) Methylobacterium extorquens CM4 7117957 YP_002423267.1 CDS Mchl_4563 NC_011757.1 4830797 4831576 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_4192 ornithine carbamoyltransferase; ornithine carbamoyltransferase complement(4830797..4831576) Methylobacterium extorquens CM4 7117958 YP_002423268.1 CDS Mchl_4564 NC_011757.1 4831573 4832577 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_4193 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(4831573..4832577) Methylobacterium extorquens CM4 7117959 YP_002423269.1 CDS Mchl_4565 NC_011757.1 4832574 4833659 R PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: mex:Mext_4194 ABC transporter; ABC transporter complement(4832574..4833659) Methylobacterium extorquens CM4 7117960 YP_002423270.1 CDS Mchl_4566 NC_011757.1 4833748 4834452 R PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_4195 cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(4833748..4834452) Methylobacterium extorquens CM4 7117961 YP_002423271.1 CDS Mchl_4567 NC_011757.1 4835252 4837954 D KEGG: mex:Mext_4197 hypothetical protein; hypothetical protein 4835252..4837954 Methylobacterium extorquens CM4 7117962 YP_002423272.1 CDS Mchl_4568 NC_011757.1 4838348 4838737 D KEGG: mex:Mext_4198 hypothetical protein; hypothetical protein 4838348..4838737 Methylobacterium extorquens CM4 7117963 YP_002423273.1 CDS Mchl_4569 NC_011757.1 4838775 4840076 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4199 major facilitator transporter; major facilitator superfamily protein complement(4838775..4840076) Methylobacterium extorquens CM4 7117964 YP_002423274.1 CDS Mchl_4570 NC_011757.1 4840166 4841341 R PFAM: aminotransferase class V; KEGG: mex:Mext_4200 aminotransferase class V; serine--glyoxylate transaminase complement(4840166..4841341) Methylobacterium extorquens CM4 7117965 YP_002423275.1 CDS Mchl_4571 NC_011757.1 4841493 4842284 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_4201 regulatory protein GntR HTH; GntR family transcriptional regulator 4841493..4842284 Methylobacterium extorquens CM4 7117966 YP_002423276.1 CDS Mchl_4572 NC_011757.1 4842340 4843116 D KEGG: mex:Mext_4202 hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: xylose isomerase; hydroxypyruvate isomerase 4842340..4843116 Methylobacterium extorquens CM4 7117967 YP_002423277.1 CDS Mchl_4573 NC_011757.1 4843232 4844104 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_4203 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4843232..4844104) Methylobacterium extorquens CM4 7117968 YP_002423278.1 CDS Mchl_4574 NC_011757.1 4844181 4847153 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase; KEGG: mex:Mext_4204 D-lactate dehydrogenase (cytochrome); D-lactate dehydrogenase (cytochrome) complement(4844181..4847153) Methylobacterium extorquens CM4 7117969 YP_002423279.1 CDS Mchl_4575 NC_011757.1 4847335 4848699 R TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mex:Mext_4205 polyhydroxyalkanoate depolymerase, intracellular; polyhydroxyalkanoate depolymerase, intracellular complement(4847335..4848699) Methylobacterium extorquens CM4 7117970 YP_002423280.1 CDS Mchl_4576 NC_011757.1 4849000 4850433 R PFAM: aldehyde dehydrogenase; KEGG: mex:Mext_4206 aldehyde dehydrogenase; aldehyde dehydrogenase complement(4849000..4850433) Methylobacterium extorquens CM4 7117971 YP_002423281.1 CDS Mchl_4578 NC_011757.1 4851240 4852715 D PFAM: lipopolysaccharide biosynthesis protein; KEGG: rpc:RPC_0674 lipopolysaccharide biosynthesis; lipopolysaccharide biosynthesis protein 4851240..4852715 Methylobacterium extorquens CM4 7117973 YP_002423282.1 CDS Mchl_4579 NC_011757.1 4852797 4854143 D PFAM: O-antigen polymerase; KEGG: rsh:Rsph17029_3696 O-antigen polymerase; O-antigen polymerase 4852797..4854143 Methylobacterium extorquens CM4 7117974 YP_002423283.1 CDS Mchl_4580 NC_011757.1 4854709 4855014 R PFAM: surface presentation of antigens (SPOA) protein; KEGG: mex:Mext_4210 surface presentation of antigens (SpoA) protein; surface presentation of antigens (SPOA) protein complement(4854709..4855014) Methylobacterium extorquens CM4 7117976 YP_002423284.1 CDS Mchl_4581 NC_011757.1 4855073 4855807 D TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: mex:Mext_4211 lipoate-protein ligase B; lipoate-protein ligase B 4855073..4855807 Methylobacterium extorquens CM4 7117977 YP_002423285.1 CDS Mchl_4582 NC_011757.1 4855934 4857094 R PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4212 glycosyl transferase; family 2 glycosyl transferase complement(4855934..4857094) Methylobacterium extorquens CM4 7117978 YP_002423286.1 CDS Mchl_4583 NC_011757.1 4857340 4857786 D PFAM: protein of unknown function DUF606; KEGG: mex:Mext_4213 hypothetical protein; hypothetical protein 4857340..4857786 Methylobacterium extorquens CM4 7117979 YP_002423287.1 CDS Mchl_4584 NC_011757.1 4857808 4859766 R PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_4214 hypothetical protein; hypothetical protein complement(4857808..4859766) Methylobacterium extorquens CM4 7117980 YP_002423288.1 CDS Mchl_4585 NC_011757.1 4859995 4860369 R PFAM: response regulator receiver; KEGG: mex:Mext_4215 response regulator receiver; response regulator receiver protein complement(4859995..4860369) Methylobacterium extorquens CM4 7117981 YP_002423289.1 CDS Mchl_4586 NC_011757.1 4860542 4861903 D PFAM: pentapeptide repeat protein; KEGG: mex:Mext_4216 pentapeptide repeat-containing protein; pentapeptide repeat-containing protein 4860542..4861903 Methylobacterium extorquens CM4 7117982 YP_002423290.1 CDS Mchl_4587 NC_011757.1 4861987 4864398 D KEGG: mex:Mext_4217 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 4861987..4864398 Methylobacterium extorquens CM4 7117983 YP_002423291.1 CDS Mchl_4589 NC_011757.1 4866050 4866937 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_4219 hypothetical protein; hypothetical protein 4866050..4866937 Methylobacterium extorquens CM4 7117985 YP_002423292.1 CDS Mchl_4590 NC_011757.1 4866950 4867684 R PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mex:Mext_4220 response regulator receiver; LuxR family transcriptional regulator complement(4866950..4867684) Methylobacterium extorquens CM4 7117986 YP_002423293.1 CDS Mchl_4591 NC_011757.1 4867810 4868373 R PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_4221 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(4867810..4868373) Methylobacterium extorquens CM4 7117987 YP_002423294.1 CDS Mchl_4592 NC_011757.1 4868515 4868958 D PFAM: protein of unknown function DUF983; KEGG: mex:Mext_4222 hypothetical protein; hypothetical protein 4868515..4868958 Methylobacterium extorquens CM4 7117988 YP_002423295.1 CDS Mchl_4593 NC_011757.1 4869031 4870770 R TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: mex:Mext_4223 L-lactate transport; L-lactate transport complement(4869031..4870770) Methylobacterium extorquens CM4 7117989 YP_002423296.1 CDS Mchl_4594 NC_011757.1 4871143 4872066 D PFAM: manganese containing catalase; KEGG: mex:Mext_4224 manganese containing catalase; manganese containing catalase 4871143..4872066 Methylobacterium extorquens CM4 7117990 YP_002423297.1 CDS Mchl_4595 NC_011757.1 4872131 4873027 R PFAM: Squalene/phytoene synthase; KEGG: mex:Mext_4225 squalene/phytoene synthase; Squalene/phytoene synthase complement(4872131..4873027) Methylobacterium extorquens CM4 7117991 YP_002423298.1 CDS Mchl_4596 NC_011757.1 4873161 4873556 R PFAM: protein of unknown function DUF498; KEGG: mex:Mext_4226 hypothetical protein; hypothetical protein complement(4873161..4873556) Methylobacterium extorquens CM4 7117992 YP_002423299.1 CDS Mchl_4597 NC_011757.1 4873681 4874625 R TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: mex:Mext_4227 protein-export membrane protein SecF; protein-export membrane protein SecF complement(4873681..4874625) Methylobacterium extorquens CM4 7117993 YP_002423300.1 CDS Mchl_4598 NC_011757.1 4874725 4876323 R TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: mex:Mext_4228 protein-export membrane protein SecD; protein-export membrane protein SecD complement(4874725..4876323) Methylobacterium extorquens CM4 7117994 YP_002423301.1 CDS Mchl_4599 NC_011757.1 4876391 4876723 R TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: mex:Mext_4229 preprotein translocase, YajC subunit; preprotein translocase subunit YajC complement(4876391..4876723) Methylobacterium extorquens CM4 7117995 YP_002423302.1 CDS Mchl_4600 NC_011757.1 4877209 4878099 D PFAM: protein of unknown function DUF815; KEGG: mex:Mext_4230 hypothetical protein; hypothetical protein 4877209..4878099 Methylobacterium extorquens CM4 7117996 YP_002423303.1 CDS Mchl_4601 NC_011757.1 4878223 4879590 R PFAM: peptidase M23; KEGG: mex:Mext_4231 peptidase M23B; peptidase M23 complement(4878223..4879590) Methylobacterium extorquens CM4 7117997 YP_002423304.1 CDS Mchl_4602 NC_011757.1 4879794 4880492 R PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: mex:Mext_4232 protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(4879794..4880492) Methylobacterium extorquens CM4 7117998 YP_002423305.1 CDS surE NC_011757.1 4880517 4881281 R catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE complement(4880517..4881281) Methylobacterium extorquens CM4 7117999 YP_002423306.1 CDS Mchl_4604 NC_011757.1 4881281 4882567 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(4881281..4882567) Methylobacterium extorquens CM4 7118000 YP_002423307.1 CDS Mchl_4605 NC_011757.1 4883445 4883963 R PFAM: regulatory protein MarR; KEGG: mex:Mext_4235 regulatory protein MarR; MarR family transcriptional regulator complement(4883445..4883963) Methylobacterium extorquens CM4 7118001 YP_002423308.1 CDS Mchl_4606 NC_011757.1 4884125 4884592 R KEGG: mex:Mext_4236 hypothetical protein; hypothetical protein complement(4884125..4884592) Methylobacterium extorquens CM4 7118002 YP_002423309.1 CDS Mchl_4607 NC_011757.1 4884589 4885923 R PFAM: enoyl-CoA hydratase/isomerase; KEGG: mex:Mext_4237 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(4884589..4885923) Methylobacterium extorquens CM4 7118003 YP_002423310.1 CDS Mchl_4608 NC_011757.1 4886407 4887462 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 4886407..4887462 Methylobacterium extorquens CM4 7118004 YP_002423311.1 CDS Mchl_4609 NC_011757.1 4887488 4887889 D KEGG: mex:Mext_4239 hypothetical protein; hypothetical protein 4887488..4887889 Methylobacterium extorquens CM4 7118005 YP_002423312.1 CDS Mchl_4610 NC_011757.1 4888003 4888497 D PFAM: RDD domain containing protein; KEGG: mex:Mext_4240 RDD domain-containing protein; RDD domain-containing protein 4888003..4888497 Methylobacterium extorquens CM4 7118006 YP_002423313.1 CDS Mchl_4611 NC_011757.1 4888636 4889382 D Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 4888636..4889382 Methylobacterium extorquens CM4 7118007 YP_002423314.1 CDS Mchl_4612 NC_011757.1 4889469 4889795 D TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: mex:Mext_4242 addiction module killer protein; addiction module killer protein 4889469..4889795 Methylobacterium extorquens CM4 7118008 YP_002423315.1 CDS Mchl_4613 NC_011757.1 4889795 4890112 D KEGG: mex:Mext_4243 hypothetical protein; transcriptional regulator 4889795..4890112 Methylobacterium extorquens CM4 7118009 YP_002423316.1 CDS Mchl_4614 NC_011757.1 4890147 4890710 R PFAM: transferase hexapeptide repeat containing protein; KEGG: mex:Mext_4244 hexapaptide repeat-containing transferase; transferase complement(4890147..4890710) Methylobacterium extorquens CM4 7118010 YP_002423317.1 CDS Mchl_4615 NC_011757.1 4890737 4891642 R PFAM: protein of unknown function zinc metallopeptidase KEGG: mex:Mext_4245 protein of unknown function zinc metallopeptidase; hypothetical protein complement(4890737..4891642) Methylobacterium extorquens CM4 7118011 YP_002423318.1 CDS Mchl_4616 NC_011757.1 4891748 4892752 R TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: uracil-DNA glycosylase superfamily; KEGG: mex:Mext_4246 phage SPO1 DNA polymerase-related protein; phage SPO1 DNA polymerase-like protein complement(4891748..4892752) Methylobacterium extorquens CM4 7117779 YP_002423319.1 CDS Mchl_4617 NC_011757.1 4892973 4894646 D PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: mex:Mext_4247 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 4892973..4894646 Methylobacterium extorquens CM4 7115185 YP_002423320.1 CDS Mchl_4618 NC_011757.1 4894740 4895729 R PFAM: peptidase S58 DmpA; KEGG: mex:Mext_4248 peptidase S58 DmpA; peptidase S58 DmpA complement(4894740..4895729) Methylobacterium extorquens CM4 7115186 YP_002423321.1 CDS Mchl_4619 NC_011757.1 4895726 4896610 R TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_4249 transporter DMT superfamily protein; RarD protein, DMT superfamily transporter complement(4895726..4896610) Methylobacterium extorquens CM4 7115187 YP_002423322.1 CDS Mchl_4620 NC_011757.1 4896668 4896955 R KEGG: mex:Mext_4250 hypothetical protein; hypothetical protein complement(4896668..4896955) Methylobacterium extorquens CM4 7115188 YP_002423323.1 CDS Mchl_4621 NC_011757.1 4897014 4897262 D KEGG: mex:Mext_4251 hypothetical protein; hypothetical protein 4897014..4897262 Methylobacterium extorquens CM4 7115189 YP_002423324.1 CDS Mchl_4622 NC_011757.1 4897359 4898546 D TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: mex:Mext_4252 cystathionine beta-lyase; cystathionine beta-lyase 4897359..4898546 Methylobacterium extorquens CM4 7115190 YP_002423325.1 CDS Mchl_4623 NC_011757.1 4898946 4900394 D PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: met:M446_6753 hypothetical protein; hypothetical protein 4898946..4900394 Methylobacterium extorquens CM4 7115191 YP_002423326.1 CDS Mchl_4624 NC_011757.1 4900581 4901177 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_4258 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(4900581..4901177) Methylobacterium extorquens CM4 7115192 YP_002423327.1 CDS Mchl_4625 NC_011757.1 4901585 4904863 D KEGG: mex:Mext_4259 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 4901585..4904863 Methylobacterium extorquens CM4 7115193 YP_002423328.1 CDS Mchl_4626 NC_011757.1 4904897 4907125 R PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4260 glycosyl transferase; family 2 glycosyl transferase complement(4904897..4907125) Methylobacterium extorquens CM4 7115194 YP_002423329.1 CDS Mchl_4627 NC_011757.1 4907234 4907560 R PFAM: cupin; KEGG: mex:Mext_4261 cupin 2 domain-containing protein; cupin complement(4907234..4907560) Methylobacterium extorquens CM4 7115195 YP_002423330.1 CDS Mchl_4628 NC_011757.1 4907683 4907844 D KEGG: predicted protein; hypothetical protein 4907683..4907844 Methylobacterium extorquens CM4 7115196 YP_002423331.1 CDS Mchl_4629 NC_011757.1 4907849 4908499 D KEGG: mex:Mext_4262 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; methyltransferase small; methyltransferase type 11; methyltransferase type 12; protein-L-isoaspartate O-methyltransferase 4907849..4908499 Methylobacterium extorquens CM4 7115197 YP_002423332.1 CDS Mchl_4630 NC_011757.1 4908691 4909179 D PFAM: heat shock protein Hsp20; KEGG: mex:Mext_4263 heat shock protein HSP20; heat shock protein Hsp20 4908691..4909179 Methylobacterium extorquens CM4 7115198 YP_002423333.1 CDS Mchl_4631 NC_011757.1 4909284 4909781 D KEGG: mex:Mext_4264 hypothetical protein; hypothetical protein 4909284..4909781 Methylobacterium extorquens CM4 7115199 YP_002423334.1 CDS Mchl_4632 NC_011757.1 4909844 4911829 R TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: mex:Mext_4265 DNA mismatch repair protein MutL; DNA mismatch repair protein MutL complement(4909844..4911829) Methylobacterium extorquens CM4 7115200 YP_002423335.1 CDS Mchl_4633 NC_011757.1 4912046 4913272 R PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_4266 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain-containing protein complement(4912046..4913272) Methylobacterium extorquens CM4 7115201 YP_002423336.1 CDS Mchl_4634 NC_011757.1 4913412 4915277 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_4267 ABC transporter; ABC transporter 4913412..4915277 Methylobacterium extorquens CM4 7115202 YP_002423337.1 CDS Mchl_4635 NC_011757.1 4915677 4916708 D KEGG: mex:Mext_4268 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4915677..4916708 Methylobacterium extorquens CM4 7115203 YP_002423338.1 CDS Mchl_4636 NC_011757.1 4916684 4917400 R PFAM: bifunctional deaminase-reductase domain protein; KEGG: mex:Mext_4269 deaminase-reductase domain-containing protein; bifunctional deaminase-reductase domain-containing protein complement(4916684..4917400) Methylobacterium extorquens CM4 7115204 YP_002423339.1 CDS Mchl_4637 NC_011757.1 4917549 4918001 D PFAM: OsmC family protein; KEGG: mex:Mext_4270 OsmC family protein; OsmC family protein 4917549..4918001 Methylobacterium extorquens CM4 7115205 YP_002423340.1 CDS Mchl_4638 NC_011757.1 4918071 4918508 D PFAM: protein of unknown function DUF336; KEGG: mex:Mext_4271 hypothetical protein; hypothetical protein 4918071..4918508 Methylobacterium extorquens CM4 7115206 YP_002423341.1 CDS Mchl_4639 NC_011757.1 4918875 4920473 D PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_4272 extracellular solute-binding protein; family 5 extracellular solute-binding protein 4918875..4920473 Methylobacterium extorquens CM4 7115207 YP_002423342.1 CDS Mchl_4640 NC_011757.1 4920470 4921393 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_4273 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 4920470..4921393 Methylobacterium extorquens CM4 7115208 YP_002423343.1 CDS Mchl_4641 NC_011757.1 4921390 4922481 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_4274 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component 4921390..4922481 Methylobacterium extorquens CM4 7115209 YP_002423344.1 CDS Mchl_4642 NC_011757.1 4922489 4922806 R KEGG: mex:Mext_4275 hypothetical protein; hypothetical protein complement(4922489..4922806) Methylobacterium extorquens CM4 7115210 YP_002423345.1 CDS Mchl_4643 NC_011757.1 4922911 4924389 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_4276 major facilitator transporter; major facilitator superfamily protein 4922911..4924389 Methylobacterium extorquens CM4 7115211 YP_002423346.1 CDS Mchl_4644 NC_011757.1 4924483 4925073 R KEGG: mex:Mext_4277 hypothetical protein; hypothetical protein complement(4924483..4925073) Methylobacterium extorquens CM4 7115212 YP_002423347.1 CDS Mchl_4645 NC_011757.1 4925213 4925911 R PFAM: protein of unknown function DUF1013; KEGG: mex:Mext_4278 hypothetical protein; hypothetical protein complement(4925213..4925911) Methylobacterium extorquens CM4 7115213 YP_002423348.1 CDS Mchl_4646 NC_011757.1 4926143 4927081 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4279 LysR substrate-binding; LysR family transcriptional regulator complement(4926143..4927081) Methylobacterium extorquens CM4 7115214 YP_002423349.1 CDS Mchl_4647 NC_011757.1 4927282 4927881 D stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 4927282..4927881 Methylobacterium extorquens CM4 7115215 YP_002423350.1 CDS Mchl_4648 NC_011757.1 4927943 4930090 R KEGG: mex:Mext_4281 thiol:disulfide interchange protein; thiol:disulfide interchange protein complement(4927943..4930090) Methylobacterium extorquens CM4 7115216 YP_002423351.1 CDS Mchl_4649 NC_011757.1 4930283 4933033 R TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: mex:Mext_4282 DNA mismatch repair protein MutS; DNA mismatch repair protein MutS complement(4930283..4933033) Methylobacterium extorquens CM4 7115217 YP_002423352.1 CDS Mchl_4650 NC_011757.1 4933221 4933538 R KEGG: mex:Mext_4283 hypothetical protein; hypothetical protein complement(4933221..4933538) Methylobacterium extorquens CM4 7115218 YP_002423353.1 CDS Mchl_4651 NC_011757.1 4933720 4936221 D KEGG: mex:Mext_4284 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase; helicase-associated domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases; ATP-dependent helicase HrpB 4933720..4936221 Methylobacterium extorquens CM4 7115219 YP_002423354.1 CDS Mchl_4652 NC_011757.1 4936178 4936903 R KEGG: mex:Mext_4285 hypothetical protein; hypothetical protein complement(4936178..4936903) Methylobacterium extorquens CM4 7115220 YP_002423355.1 CDS Mchl_4653 NC_011757.1 4937104 4937475 D KEGG: mex:Mext_4286 hypothetical protein; hypothetical protein 4937104..4937475 Methylobacterium extorquens CM4 7115221 YP_002423356.1 CDS Mchl_4654 NC_011757.1 4937490 4937885 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_4287 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(4937490..4937885) Methylobacterium extorquens CM4 7115222 YP_002423357.1 CDS Mchl_4655 NC_011757.1 4938008 4939105 D TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase; KEGG: mex:Mext_4288 tyrosine recombinase XerC; tyrosine recombinase XerC 4938008..4939105 Methylobacterium extorquens CM4 7115223 YP_002423358.1 CDS Mchl_4656 NC_011757.1 4939205 4939339 D KEGG: mpo:Mpop_4806 hypothetical protein; hypothetical protein 4939205..4939339 Methylobacterium extorquens CM4 7115224 YP_002423359.1 CDS Mchl_4657 NC_011757.1 4939421 4940017 R PFAM: phosphoglycerate mutase; KEGG: mex:Mext_4289 phosphoglycerate mutase; phosphoglycerate mutase complement(4939421..4940017) Methylobacterium extorquens CM4 7115225 YP_002423360.1 CDS Mchl_4658 NC_011757.1 4940193 4941197 D PFAM: protein of unknown function DUF344; KEGG: mex:Mext_4290 hypothetical protein; hypothetical protein 4940193..4941197 Methylobacterium extorquens CM4 7115226 YP_002423361.1 CDS Mchl_4659 NC_011757.1 4941287 4942444 D KEGG: mrd:Mrad2831_5526 hypothetical protein; hypothetical protein 4941287..4942444 Methylobacterium extorquens CM4 7115227 YP_002423362.1 CDS Mchl_4660 NC_011757.1 4942446 4943108 D PFAM: MOSC domain containing protein; KEGG: mex:Mext_4291 MOSC domain-containing protein; MOSC domain-containing protein 4942446..4943108 Methylobacterium extorquens CM4 7115228 YP_002423363.1 CDS Mchl_4661 NC_011757.1 4943139 4943966 R KEGG: mex:Mext_4292 enoyl-acyl carrier protein reductase; enoyl-acyl carrier protein reductase complement(4943139..4943966) Methylobacterium extorquens CM4 7115229 YP_002423364.1 CDS Mchl_4662 NC_011757.1 4944211 4945161 R PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: mex:Mext_4293 heat shock protein DnaJ domain-containing protein; heat shock protein DnaJ domain-containing protein complement(4944211..4945161) Methylobacterium extorquens CM4 7115230 YP_002423365.1 CDS Mchl_4663 NC_011757.1 4945307 4945849 R KEGG: mex:Mext_4294 hypothetical protein; hypothetical protein complement(4945307..4945849) Methylobacterium extorquens CM4 7115231 YP_002423366.1 CDS Mchl_4664 NC_011757.1 4945935 4946579 D KEGG: mex:Mext_4295 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase 4945935..4946579 Methylobacterium extorquens CM4 7115232 YP_002423367.1 CDS Mchl_4665 NC_011757.1 4946628 4947011 R PFAM: response regulator receiver; KEGG: mex:Mext_4296 response regulator receiver; response regulator receiver protein complement(4946628..4947011) Methylobacterium extorquens CM4 7115233 YP_002423368.1 CDS Mchl_4666 NC_011757.1 4947295 4948047 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_4297 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4947295..4948047 Methylobacterium extorquens CM4 7115234 YP_002423369.1 CDS Mchl_4667 NC_011757.1 4948040 4949185 D KEGG: mex:Mext_4298 hypothetical protein; hypothetical protein 4948040..4949185 Methylobacterium extorquens CM4 7115235 YP_002423370.1 CDS Mchl_4668 NC_011757.1 4949182 4949667 D PFAM: NUDIX hydrolase; KEGG: mex:Mext_4299 NUDIX hydrolase; NUDIX hydrolase 4949182..4949667 Methylobacterium extorquens CM4 7115236 YP_002423371.1 CDS Mchl_4669 NC_011757.1 4949664 4950113 D PFAM: conserved hypothetical protein; KEGG: mex:Mext_4300 hypothetical protein; hypothetical protein 4949664..4950113 Methylobacterium extorquens CM4 7115237 YP_002423372.1 CDS Mchl_4670 NC_011757.1 4950451 4950705 D KEGG: mex:Mext_4301 hypothetical protein; hypothetical protein 4950451..4950705 Methylobacterium extorquens CM4 7115238 YP_002423373.1 CDS Mchl_4671 NC_011757.1 4950904 4952460 R KEGG: mex:Mext_4302 hypothetical protein; hypothetical protein complement(4950904..4952460) Methylobacterium extorquens CM4 7115239 YP_002423374.1 CDS Mchl_4672 NC_011757.1 4952761 4954098 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(4952761..4954098) Methylobacterium extorquens CM4 7115240 YP_002423375.1 CDS Mchl_4673 NC_011757.1 4954200 4955054 D TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel; KEGG: mex:Mext_4304 folate-binding protein YgfZ; folate-binding protein YgfZ 4954200..4955054 Methylobacterium extorquens CM4 7115241 YP_002423376.1 CDS Mchl_4674 NC_011757.1 4955051 4955680 D PFAM: methyladenine glycosylase; KEGG: mex:Mext_4305 DNA-3-methyladenine glycosylase I; DNA-3-methyladenine glycosylase I 4955051..4955680 Methylobacterium extorquens CM4 7115242 YP_002423377.1 CDS Mchl_4675 NC_011757.1 4955677 4956303 D PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: mex:Mext_4306 metal-dependent phosphohydrolase; metal dependent phosphohydrolase 4955677..4956303 Methylobacterium extorquens CM4 7115243 YP_002423378.1 CDS Mchl_4676 NC_011757.1 4956318 4956830 D KEGG: mex:Mext_4307 hypothetical protein; hypothetical protein 4956318..4956830 Methylobacterium extorquens CM4 7115244 YP_002423379.1 CDS Mchl_4677 NC_011757.1 4956930 4957196 D TIGRFAM: exodeoxyribonuclease VII small subunit; PFAM: exonuclease VII small subunit; KEGG: mex:Mext_4308 exodeoxyribonuclease VII small subunit; exodeoxyribonuclease VII small subunit 4956930..4957196 Methylobacterium extorquens CM4 7115245 YP_002423380.1 CDS Mchl_4678 NC_011757.1 4957286 4959262 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 4957286..4959262 Methylobacterium extorquens CM4 7115246 YP_002423381.1 CDS Mchl_4679 NC_011757.1 4959308 4959913 R PFAM: superoxide dismutase copper/zinc binding; KEGG: mex:Mext_4310 superoxide dismutase copper/zinc binding; superoxide dismutase copper/zinc binding complement(4959308..4959913) Methylobacterium extorquens CM4 7115247 YP_002423382.1 CDS Mchl_4680 NC_011757.1 4960273 4961025 D TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: mex:Mext_4311 hemolysin A; hemolysin A 4960273..4961025 Methylobacterium extorquens CM4 7115248 YP_002423383.1 CDS Mchl_4681 NC_011757.1 4961025 4962320 D PFAM: (uracil-5)-methyltransferase; KEGG: mex:Mext_4312 (uracil-5)-methyltransferase; (uracil-5)-methyltransferase 4961025..4962320 Methylobacterium extorquens CM4 7115249 YP_002423384.1 CDS Mchl_4682 NC_011757.1 4962394 4963638 R KEGG: mex:Mext_4313 capsular polysaccharide biosynthesis protein-like protein; capsular polysaccharide biosynthesis protein-like protein complement(4962394..4963638) Methylobacterium extorquens CM4 7115250 YP_002423385.1 CDS Mchl_4683 NC_011757.1 4963954 4964949 D KEGG: mex:Mext_4314 hypothetical protein; hypothetical protein 4963954..4964949 Methylobacterium extorquens CM4 7115251 YP_002423386.1 CDS Mchl_4684 NC_011757.1 4964962 4965693 R PFAM: protein of unknown function DUF159; KEGG: mex:Mext_4315 hypothetical protein; hypothetical protein complement(4964962..4965693) Methylobacterium extorquens CM4 7115252 YP_002423387.1 CDS Mchl_4685 NC_011757.1 4965862 4967082 D PFAM: protein of unknown function DUF482; KEGG: mex:Mext_4316 hypothetical protein; hypothetical protein 4965862..4967082 Methylobacterium extorquens CM4 7115253 YP_002423388.1 CDS Mchl_4686 NC_011757.1 4967079 4968236 D KEGG: mex:Mext_4317 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 4967079..4968236 Methylobacterium extorquens CM4 7115254 YP_002423389.1 CDS Mchl_4687 NC_011757.1 4968487 4969572 D TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: mex:Mext_4318 methylated-DNA--protein-cysteine methyltransferase; AraC family transcriptional regulator 4968487..4969572 Methylobacterium extorquens CM4 7115255 YP_002423390.1 CDS Mchl_4688 NC_011757.1 4969577 4970599 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mex:Mext_4319 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter complement(4969577..4970599) Methylobacterium extorquens CM4 7115256 YP_002423391.1 CDS Mchl_4689 NC_011757.1 4970721 4971149 D PFAM: histidine triad (HIT) protein; KEGG: mex:Mext_4320 histidine triad (HIT) protein; histidine triad (HIT) protein 4970721..4971149 Methylobacterium extorquens CM4 7115257 YP_002423392.1 CDS Mchl_4690 NC_011757.1 4971206 4971652 R PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_4321 type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(4971206..4971652) Methylobacterium extorquens CM4 7115258 YP_002423393.1 CDS Mchl_4691 NC_011757.1 4971734 4971982 R KEGG: mex:Mext_4322 hypothetical protein; hypothetical protein complement(4971734..4971982) Methylobacterium extorquens CM4 7115259 YP_002423394.1 CDS Mchl_4692 NC_011757.1 4972248 4974131 R PFAM: glycoside hydrolase 15-related; KEGG: mex:Mext_4323 glycoside hydrolase 15-related; glycoside hydrolase 15-like protein complement(4972248..4974131) Methylobacterium extorquens CM4 7115260 YP_002423395.1 CDS Mchl_4693 NC_011757.1 4974223 4974501 R KEGG: mex:Mext_4324 hypothetical protein; hypothetical protein complement(4974223..4974501) Methylobacterium extorquens CM4 7115261 YP_002423396.1 CDS Mchl_4694 NC_011757.1 4974564 4975730 R KEGG: mex:Mext_4325 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase complement(4974564..4975730) Methylobacterium extorquens CM4 7115262 YP_002423397.1 CDS Mchl_4695 NC_011757.1 4975828 4976838 R PFAM: sugar isomerase (SIS); KEGG: mex:Mext_4326 glutamine--fructose-6-phosphate transaminase (isomerizing); glutamine--fructose-6-phosphate transaminase complement(4975828..4976838) Methylobacterium extorquens CM4 7115263 YP_002423398.1 CDS murQ NC_011757.1 4976835 4977722 R catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid-6-phosphate etherase complement(4976835..4977722) Methylobacterium extorquens CM4 7115264 YP_002423399.1 CDS Mchl_4697 NC_011757.1 4977817 4978803 D PFAM: endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_4328 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 4977817..4978803 Methylobacterium extorquens CM4 7115265 YP_002423400.1 CDS Mchl_4698 NC_011757.1 4978882 4979949 D PFAM: asparaginase/glutaminase; KEGG: mex:Mext_4329 asparaginase; asparaginase 4978882..4979949 Methylobacterium extorquens CM4 7118015 YP_002423401.1 CDS Mchl_4699 NC_011757.1 4980066 4981607 R PFAM: phospholipase D/transphosphatidylase; KEGG: mex:Mext_4330 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase complement(4980066..4981607) Methylobacterium extorquens CM4 7118064 YP_002423402.1 CDS Mchl_4700 NC_011757.1 4981672 4982370 R PFAM: hypothetical protein; KEGG: mex:Mext_4331 hypothetical protein; hypothetical protein complement(4981672..4982370) Methylobacterium extorquens CM4 7118065 YP_002423403.1 CDS Mchl_4701 NC_011757.1 4982516 4982926 R KEGG: mex:Mext_4332 hypothetical protein; hypothetical protein complement(4982516..4982926) Methylobacterium extorquens CM4 7118066 YP_002423404.1 CDS Mchl_4702 NC_011757.1 4983142 4983831 R PFAM: Surfeit locus 1 family protein; KEGG: mex:Mext_4333 surfeit locus 1 family protein; Surfeit locus 1 family protein complement(4983142..4983831) Methylobacterium extorquens CM4 7118067 YP_002423405.1 CDS Mchl_4703 NC_011757.1 4983929 4984309 R TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: mex:Mext_4334 cytochrome o ubiquinol oxidase subunit IV; cytochrome o ubiquinol oxidase subunit IV complement(4983929..4984309) Methylobacterium extorquens CM4 7118068 YP_002423406.1 CDS Mchl_4704 NC_011757.1 4984306 4984953 R TIGRFAM: cytochrome o ubiquinol oxidase subunit III; PFAM: cytochrome C oxidase subunit III; KEGG: mex:Mext_4335 cytochrome o ubiquinol oxidase subunit III; cytochrome o ubiquinol oxidase subunit III complement(4984306..4984953) Methylobacterium extorquens CM4 7118069 YP_002423407.1 CDS Mchl_4705 NC_011757.1 4984962 4986965 R KEGG: mex:Mext_4336 cytochrome o ubiquinol oxidase subunit I; TIGRFAM: cytochrome o ubiquinol oxidase subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome o ubiquinol oxidase subunit I complement(4984962..4986965) Methylobacterium extorquens CM4 7118070 YP_002423408.1 CDS Mchl_4706 NC_011757.1 4987005 4988168 R TIGRFAM: ubiquinol oxidase subunit II; PFAM: cytochrome C oxidase subunit II; COX aromatic rich domain protein; KEGG: mex:Mext_4337 ubiquinol oxidase subunit II; ubiquinol oxidase subunit II complement(4987005..4988168) Methylobacterium extorquens CM4 7118071 YP_002423409.1 CDS Mchl_4707 NC_011757.1 4988363 4989697 R KEGG: mex:Mext_4338 ABC transporter transmembrane protein; ABC transporter transmembrane protein complement(4988363..4989697) Methylobacterium extorquens CM4 7118072 YP_002423410.1 CDS Mchl_4708 NC_011757.1 4989989 4993051 R PFAM: acriflavin resistance protein; KEGG: mex:Mext_4339 acriflavin resistance protein; acriflavin resistance protein complement(4989989..4993051) Methylobacterium extorquens CM4 7118073 YP_002423411.1 CDS Mchl_4709 NC_011757.1 4993120 4994271 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_4340 RND family efflux transporter MFP subunit; efflux transporter RND family MFP subunit complement(4993120..4994271) Methylobacterium extorquens CM4 7118074 YP_002423412.1 CDS Mchl_4710 NC_011757.1 4994268 4995419 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_4341 RND family efflux transporter MFP subunit; efflux transporter RND family MFP subunit complement(4994268..4995419) Methylobacterium extorquens CM4 7118075 YP_002423413.1 CDS Mchl_4711 NC_011757.1 4995639 4996199 D PFAM: regulatory protein TetR; KEGG: mex:Mext_4342 regulatory protein TetR; TetR family transcriptional regulator 4995639..4996199 Methylobacterium extorquens CM4 7118076 YP_002423414.1 CDS Mchl_4712 NC_011757.1 4996519 4997229 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_4343 response regulator receiver; LuxR family transcriptional regulator complement(4996519..4997229) Methylobacterium extorquens CM4 7118077 YP_002423415.1 CDS Mchl_4713 NC_011757.1 4997231 4998445 R PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mex:Mext_4344 ATPase domain-containing protein; histidine kinase complement(4997231..4998445) Methylobacterium extorquens CM4 7118078 YP_002423416.1 CDS Mchl_4714 NC_011757.1 4999139 4999789 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_4345 regulatory protein LuxR; LuxR family transcriptional regulator 4999139..4999789 Methylobacterium extorquens CM4 7118079 YP_002423417.1 CDS Mchl_4715 NC_011757.1 4999983 5000744 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_4346 regulatory protein LuxR; LuxR family transcriptional regulator 4999983..5000744 Methylobacterium extorquens CM4 7118080 YP_002423418.1 CDS Mchl_4716 NC_011757.1 5000839 5001657 D PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4347 glycosyl transferase; family 2 glycosyl transferase 5000839..5001657 Methylobacterium extorquens CM4 7118081 YP_002423419.1 CDS Mchl_4717 NC_011757.1 5001827 5003011 D KEGG: mex:Mext_4348 hypothetical protein; hypothetical protein 5001827..5003011 Methylobacterium extorquens CM4 7118082 YP_002423420.1 CDS Mchl_4718 NC_011757.1 5003425 5005233 D PFAM: integrase family protein; KEGG: mag:amb4434 integrase; integrase family protein 5003425..5005233 Methylobacterium extorquens CM4 7118084 YP_002423421.1 CDS Mchl_4719 NC_011757.1 5005422 5005682 R PFAM: helix-turn-helix domain protein; KEGG: bja:bsr0038 transcriptional regulator; XRE family transcriptional regulator complement(5005422..5005682) Methylobacterium extorquens CM4 7118085 YP_002423422.1 CDS Mchl_4720 NC_011757.1 5005790 5007040 D PFAM: beta-lactamase; KEGG: dvl:Dvul_0859 beta-lactamase domain-containing protein; beta-lactamase 5005790..5007040 Methylobacterium extorquens CM4 7118086 YP_002423423.1 CDS Mchl_4721 NC_011757.1 5007019 5008116 D KEGG: bja:bll0880 hypothetical protein; hypothetical protein 5007019..5008116 Methylobacterium extorquens CM4 7118087 YP_002423424.1 CDS Mchl_4722 NC_011757.1 5008425 5009255 D hypothetical protein 5008425..5009255 Methylobacterium extorquens CM4 7118088 YP_002423425.1 CDS Mchl_4723 NC_011757.1 5009283 5009720 D KEGG: sus:acid_0788 hypothetical protein; hypothetical protein 5009283..5009720 Methylobacterium extorquens CM4 7118089 YP_002423426.1 CDS Mchl_4724 NC_011757.1 5009738 5010439 D hypothetical protein 5009738..5010439 Methylobacterium extorquens CM4 7118090 YP_002423427.1 CDS Mchl_4725 NC_011757.1 5010541 5010684 R hypothetical protein complement(5010541..5010684) Methylobacterium extorquens CM4 7118091 YP_002423428.1 CDS Mchl_4726 NC_011757.1 5010840 5011826 R KEGG: shn:Shewana3_2964 hypothetical protein; hypothetical protein complement(5010840..5011826) Methylobacterium extorquens CM4 7118092 YP_002423429.1 CDS Mchl_4727 NC_011757.1 5012365 5012631 D PFAM: protein of unknown function DUF156; KEGG: mpo:Mpop_1883 protein of unknown function DUF156; hypothetical protein 5012365..5012631 Methylobacterium extorquens CM4 7118093 YP_002423430.1 CDS Mchl_4728 NC_011757.1 5012639 5013973 D PFAM: major facilitator superfamily MFS_1; KEGG: mpo:Mpop_1884 major facilitator superfamily MFS_1; major facilitator superfamily protein 5012639..5013973 Methylobacterium extorquens CM4 7118094 YP_002423431.1 CDS Mchl_4729 NC_011757.1 5014098 5014532 D KEGG: mpo:Mpop_1885 DNA polymerase III subunits gamma and tau; DNA polymerase III subunits gamma and tau 5014098..5014532 Methylobacterium extorquens CM4 7118095 YP_002423432.1 CDS Mchl_4730 NC_011757.1 5014589 5016316 D KEGG: mpo:Mpop_1886 efflux transporter RND family, MFP subunit; efflux transporter RND family MFP subunit 5014589..5016316 Methylobacterium extorquens CM4 7118096 YP_002423433.1 CDS Mchl_4731 NC_011757.1 5016325 5019438 D TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mpo:Mpop_1887 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux pump 5016325..5019438 Methylobacterium extorquens CM4 7118097 YP_002423434.1 CDS Mchl_4732 NC_011757.1 5019456 5019833 D KEGG: mpo:Mpop_1888 hypothetical protein; hypothetical protein 5019456..5019833 Methylobacterium extorquens CM4 7118098 YP_002423435.1 CDS Mchl_4733 NC_011757.1 5019969 5020184 D KEGG: nha:Nham_3588 hypothetical protein; hypothetical protein 5019969..5020184 Methylobacterium extorquens CM4 7118099 YP_002423436.1 CDS Mchl_4734 NC_011757.1 5020283 5020945 R KEGG: mex:Mext_1125 hypothetical protein; hypothetical protein complement(5020283..5020945) Methylobacterium extorquens CM4 7118100 YP_002423437.1 CDS Mchl_4735 NC_011757.1 5021247 5022077 D SMART: rhodanese; KEGG: mpo:Mpop_1890 rhodanese domain protein; rhodanese 5021247..5022077 Methylobacterium extorquens CM4 7118101 YP_002423438.1 CDS Mchl_4736 NC_011757.1 5022074 5023489 D TIGRFAM: chromate transporter chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: mex:Mext_1475 chromate transporter; chromate ion transporter (CHR) family chromate transporter 5022074..5023489 Methylobacterium extorquens CM4 7118102 YP_002423439.1 CDS Mchl_4737 NC_011757.1 5023489 5024133 D KEGG: mpo:Mpop_1892 hypothetical protein; hypothetical protein 5023489..5024133 Methylobacterium extorquens CM4 7118103 YP_002423440.1 CDS Mchl_4738 NC_011757.1 5024130 5024522 D KEGG: mpo:Mpop_1893 hypothetical protein; hypothetical protein 5024130..5024522 Methylobacterium extorquens CM4 7118104 YP_002423441.1 CDS Mchl_4739 NC_011757.1 5024564 5025526 D PFAM: protein of unknown function LppY and LpqO; KEGG: mpo:Mpop_1894 protein of unknown function LppY and LpqO; hypothetical protein 5024564..5025526 Methylobacterium extorquens CM4 7118105 YP_002423442.1 CDS Mchl_4740 NC_011757.1 5025532 5026578 D KEGG: mpo:Mpop_1895 hypothetical protein; hypothetical protein 5025532..5026578 Methylobacterium extorquens CM4 7118106 YP_002423443.1 CDS Mchl_4741 NC_011757.1 5026630 5026911 D hypothetical protein 5026630..5026911 Methylobacterium extorquens CM4 7118107 YP_002423444.1 CDS Mchl_4742 NC_011757.1 5027468 5028682 D KEGG: met:M446_1502 hypothetical protein; hypothetical protein 5027468..5028682 Methylobacterium extorquens CM4 7118108 YP_002423445.1 CDS Mchl_4743 NC_011757.1 5029129 5029629 D hypothetical protein 5029129..5029629 Methylobacterium extorquens CM4 7118109 YP_002423446.1 CDS Mchl_4744 NC_011757.1 5029905 5035538 D KEGG: rec:RHECIAT_CH0003310 superfamily I DNA and RNA helicase protein; superfamily I DNA and RNA helicase protein 5029905..5035538 Methylobacterium extorquens CM4 7118110 YP_002423447.1 CDS Mchl_4745 NC_011757.1 5035682 5036275 D hypothetical protein 5035682..5036275 Methylobacterium extorquens CM4 7118111 YP_002423448.1 CDS Mchl_4746 NC_011757.1 5036968 5037822 R hypothetical protein complement(5036968..5037822) Methylobacterium extorquens CM4 7118112 YP_002423449.1 CDS Mchl_4747 NC_011757.1 5037960 5038250 R hypothetical protein complement(5037960..5038250) Methylobacterium extorquens CM4 7118113 YP_002423450.1 CDS Mchl_4748 NC_011757.1 5038607 5039395 R hypothetical protein complement(5038607..5039395) Methylobacterium extorquens CM4 7118114 YP_002423451.1 CDS Mchl_4749 NC_011757.1 5039549 5040532 D PFAM: domain of unknown function DUF1738; KEGG: mex:Mext_3581 hypothetical protein; hypothetical protein 5039549..5040532 Methylobacterium extorquens CM4 7118115 YP_002423452.1 CDS Mchl_4750 NC_011757.1 5040529 5041134 D hypothetical protein 5040529..5041134 Methylobacterium extorquens CM4 7118116 YP_002423453.1 CDS Mchl_4751 NC_011757.1 5041675 5042685 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_4349 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 5041675..5042685 Methylobacterium extorquens CM4 7118117 YP_002423454.1 CDS Mchl_4752 NC_011757.1 5042714 5043667 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4350 LysR substrate-binding; LysR family transcriptional regulator complement(5042714..5043667) Methylobacterium extorquens CM4 7118118 YP_002423455.1 CDS Mchl_4753 NC_011757.1 5043841 5044089 D KEGG: mex:Mext_4351 hypothetical protein; hypothetical protein 5043841..5044089 Methylobacterium extorquens CM4 7118119 YP_002423456.1 CDS Mchl_4754 NC_011757.1 5044143 5044895 D PFAM: protein of unknown function DUF81; KEGG: mex:Mext_4352 hypothetical protein; hypothetical protein 5044143..5044895 Methylobacterium extorquens CM4 7118120 YP_002423457.1 CDS Mchl_4755 NC_011757.1 5044965 5045861 R KEGG: mex:Mext_4353 hypothetical protein; hypothetical protein complement(5044965..5045861) Methylobacterium extorquens CM4 7118121 YP_002423458.1 CDS Mchl_4756 NC_011757.1 5045873 5046847 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_4354 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase complement(5045873..5046847) Methylobacterium extorquens CM4 7118122 YP_002423459.1 CDS Mchl_4757 NC_011757.1 5047122 5048531 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 5047122..5048531 Methylobacterium extorquens CM4 7118123 YP_002423460.1 CDS Mchl_4758 NC_011757.1 5048714 5049931 R PFAM: integrase family protein; KEGG: dsh:Dshi_0988 integrase family protein; integrase family protein complement(5048714..5049931) Methylobacterium extorquens CM4 7118125 YP_002423461.1 CDS Mchl_4759 NC_011757.1 5049946 5050230 R KEGG: jan:Jann_2864 hypothetical protein; hypothetical protein complement(5049946..5050230) Methylobacterium extorquens CM4 7118126 YP_002423462.1 CDS Mchl_4760 NC_011757.1 5051408 5051839 D hypothetical protein 5051408..5051839 Methylobacterium extorquens CM4 7118127 YP_002423463.1 CDS Mchl_4761 NC_011757.1 5051903 5052166 D hypothetical protein 5051903..5052166 Methylobacterium extorquens CM4 7118128 YP_002423464.1 CDS Mchl_4762 NC_011757.1 5052910 5054010 D KEGG: rsq:Rsph17025_4201 hypothetical protein; hypothetical protein 5052910..5054010 Methylobacterium extorquens CM4 7118129 YP_002423465.1 CDS Mchl_4763 NC_011757.1 5054010 5054240 D KEGG: bvi:Bcep1808_6235 hypothetical protein; hypothetical protein 5054010..5054240 Methylobacterium extorquens CM4 7118130 YP_002423466.1 CDS Mchl_4764 NC_011757.1 5054237 5054719 D KEGG: similar to DnaJ (Hsp40) homolog, subfamily B; hypothetical protein 5054237..5054719 Methylobacterium extorquens CM4 7118131 YP_002423467.1 CDS Mchl_4765 NC_011757.1 5054716 5054844 D hypothetical protein 5054716..5054844 Methylobacterium extorquens CM4 7118132 YP_002423468.1 CDS Mchl_4766 NC_011757.1 5054953 5056176 R KEGG: ckl:CKL_3898 hypothetical protein; hypothetical protein complement(5054953..5056176) Methylobacterium extorquens CM4 7118133 YP_002423469.1 CDS Mchl_4767 NC_011757.1 5056301 5056510 R hypothetical protein complement(5056301..5056510) Methylobacterium extorquens CM4 7118134 YP_002423470.1 CDS Mchl_4768 NC_011757.1 5056931 5057164 D hypothetical protein 5056931..5057164 Methylobacterium extorquens CM4 7118135 YP_002423471.1 CDS Mchl_4769 NC_011757.1 5057276 5057791 D hypothetical protein 5057276..5057791 Methylobacterium extorquens CM4 7118136 YP_002423472.1 CDS Mchl_4770 NC_011757.1 5057999 5058418 D hypothetical protein 5057999..5058418 Methylobacterium extorquens CM4 7118137 YP_002423473.1 CDS Mchl_4771 NC_011757.1 5058651 5058899 D KEGG: mex:Mext_4519 hypothetical protein; hypothetical protein 5058651..5058899 Methylobacterium extorquens CM4 7118138 YP_002423474.1 CDS Mchl_4772 NC_011757.1 5059448 5060377 D PFAM: intradiol ring-cleavage dioxygenase; KEGG: bbt:BBta_7382 intradiol ring-cleavage dioxygenase; intradiol ring-cleavage dioxygenase 5059448..5060377 Methylobacterium extorquens CM4 7118139 YP_002423475.1 CDS Mchl_4773 NC_011757.1 5060579 5061253 D KEGG: mrd:Mrad2831_4030 hypothetical protein; hypothetical protein 5060579..5061253 Methylobacterium extorquens CM4 7118140 YP_002423476.1 CDS Mchl_4774 NC_011757.1 5061475 5062140 R KEGG: met:M446_4499 hypothetical protein; hypothetical protein complement(5061475..5062140) Methylobacterium extorquens CM4 7118141 YP_002423477.1 CDS Mchl_4775 NC_011757.1 5062369 5063031 D PFAM: adenylylsulfate kinase; KEGG: mrd:Mrad2831_1882 adenylyl-sulfate kinase; adenylyl-sulfate kinase 5062369..5063031 Methylobacterium extorquens CM4 7118142 YP_002423478.1 CDS Mchl_4776 NC_011757.1 5063205 5063933 R KEGG: mrd:Mrad2831_1350 GDSL family lipase; GDSL family lipase complement(5063205..5063933) Methylobacterium extorquens CM4 7118143 YP_002423479.1 CDS Mchl_4777 NC_011757.1 5064229 5064960 R PFAM: porin; KEGG: mpo:Mpop_0836 porin; porin complement(5064229..5064960) Methylobacterium extorquens CM4 7118144 YP_002423480.1 CDS Mchl_4778 NC_011757.1 5064990 5065154 R KEGG: mpo:Mpop_0837 hypothetical protein; hypothetical protein complement(5064990..5065154) Methylobacterium extorquens CM4 7118013 YP_002423481.1 CDS Mchl_4779 NC_011757.1 5065151 5065420 R hypothetical protein complement(5065151..5065420) Methylobacterium extorquens CM4 7118229 YP_002423482.1 CDS Mchl_4780 NC_011757.1 5065587 5066462 D KEGG: mpo:Mpop_0839 hypothetical protein; hypothetical protein 5065587..5066462 Methylobacterium extorquens CM4 7118230 YP_002423483.1 CDS Mchl_4781 NC_011757.1 5066459 5067775 D KEGG: mpo:Mpop_0840 hypothetical protein; hypothetical protein 5066459..5067775 Methylobacterium extorquens CM4 7118231 YP_002423484.1 CDS Mchl_4782 NC_011757.1 5067778 5068617 R KEGG: acr:Acry_2758 hypothetical protein; hypothetical protein complement(5067778..5068617) Methylobacterium extorquens CM4 7118232 YP_002423485.1 CDS Mchl_4783 NC_011757.1 5068727 5071261 R TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: mex:Mext_2081 outer membrane protein assembly complex, YaeT protein; outer membrane protein assembly complex, YaeT protein complement(5068727..5071261) Methylobacterium extorquens CM4 7118233 YP_002423486.1 CDS Mchl_4784 NC_011757.1 5072656 5073096 D KEGG: mpo:Mpop_0721 peptidase C14 caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit P20 5072656..5073096 Methylobacterium extorquens CM4 7118234 YP_002423487.1 CDS Mchl_4785 NC_011757.1 5073218 5073694 R TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; KEGG: mex:Mext_0113 PAS sensor protein; PAS sensor protein complement(5073218..5073694) Methylobacterium extorquens CM4 7118235 YP_002423488.1 CDS Mchl_4786 NC_011757.1 5073916 5074368 D PFAM: BLUF domain protein; KEGG: mex:Mext_0114 BLUF domain-containing protein; BLUF domain-containing protein 5073916..5074368 Methylobacterium extorquens CM4 7118236 YP_002423489.1 CDS Mchl_4788 NC_011757.1 5074765 5076822 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: met:M446_1292 integral membrane sensor hybrid histidine kinase; histidine kinase complement(5074765..5076822) Methylobacterium extorquens CM4 7118238 YP_002423490.1 CDS Mchl_4789 NC_011757.1 5077244 5079631 R TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: mpo:Mpop_0141 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PAS/PAC and MHYT sensor-containing diguanylate cyclase/phosphodiesterase complement(5077244..5079631) Methylobacterium extorquens CM4 7118239 YP_002423491.1 CDS Mchl_4790 NC_011757.1 5079944 5080573 R PFAM: integrase family protein; KEGG: mex:Mext_0119 integrase family protein; integrase family protein complement(5079944..5080573) Methylobacterium extorquens CM4 7118240 YP_002423492.1 CDS Mchl_4791 NC_011757.1 5080921 5082612 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: met:M446_6605 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(5080921..5082612) Methylobacterium extorquens CM4 7118241 YP_002423493.1 CDS Mchl_4793 NC_011757.1 5084312 5085625 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_0121 major facilitator transporter; major facilitator superfamily protein complement(5084312..5085625) Methylobacterium extorquens CM4 7118243 YP_002423494.1 CDS Mchl_4794 NC_011757.1 5085872 5086162 R KEGG: ote:Oter_3027 integral membrane protein; hypothetical protein complement(5085872..5086162) Methylobacterium extorquens CM4 7118244 YP_002423495.1 CDS Mchl_4795 NC_011757.1 5086868 5087272 D PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_0155 helix-turn-helix domain-containing protein; XRE family transcriptional regulator 5086868..5087272 Methylobacterium extorquens CM4 7118245 YP_002423496.1 CDS Mchl_4797 NC_011757.1 5087911 5088378 D KEGG: mex:Mext_0110 hypothetical protein; hypothetical protein 5087911..5088378 Methylobacterium extorquens CM4 7118247 YP_002423497.1 CDS Mchl_4798 NC_011757.1 5088992 5089354 R SMART: response regulator receiver; KEGG: mex:Mext_0109 response regulator receiver; response regulator receiver protein complement(5088992..5089354) Methylobacterium extorquens CM4 7118248 YP_002423498.1 CDS Mchl_4799 NC_011757.1 5089351 5091213 R KEGG: mex:Mext_0108 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase complement(5089351..5091213) Methylobacterium extorquens CM4 7118249 YP_002423499.1 CDS Mchl_4800 NC_011757.1 5092824 5095370 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mrd:Mrad2831_2714 TonB-dependent receptor; TonB-dependent receptor 5092824..5095370 Methylobacterium extorquens CM4 7118250 YP_002423500.1 CDS Mchl_4801 NC_011757.1 5096018 5097055 R KEGG: met:M446_0104 hypothetical protein; hypothetical protein complement(5096018..5097055) Methylobacterium extorquens CM4 7118251 YP_002423501.1 CDS Mchl_4802 NC_011757.1 5097052 5099010 R KEGG: met:M446_0104 hypothetical protein; hypothetical protein complement(5097052..5099010) Methylobacterium extorquens CM4 7118252 YP_002423502.1 CDS Mchl_4803 NC_011757.1 5098995 5100152 R PFAM: glycoside hydrolase family 8; KEGG: met:M446_0105 cellulase; cellulase complement(5098995..5100152) Methylobacterium extorquens CM4 7118253 YP_002423503.1 CDS Mchl_4804 NC_011757.1 5100152 5102683 R PFAM: cellulose synthase subunit B; KEGG: met:M446_0106 hypothetical protein; cellulose synthase subunit B complement(5100152..5102683) Methylobacterium extorquens CM4 7118254 YP_002423504.1 CDS Mchl_4805 NC_011757.1 5102732 5105146 R KEGG: met:M446_0107 cellulose synthase catalytic subunit (UDP-forming); TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; cellulose synthase catalytic subunit complement(5102732..5105146) Methylobacterium extorquens CM4 7118255 YP_002423505.1 CDS Mchl_4806 NC_011757.1 5105215 5105952 R KEGG: met:M446_0108 hypothetical protein; hypothetical protein complement(5105215..5105952) Methylobacterium extorquens CM4 7118256 YP_002423506.1 CDS Mchl_4807 NC_011757.1 5106163 5108541 R PFAM: response regulator receiver; KEGG: met:M446_0109 response regulator receiver protein; response regulator receiver protein complement(5106163..5108541) Methylobacterium extorquens CM4 7118257 YP_002423507.1 CDS Mchl_4809 NC_011757.1 5109841 5110926 R PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: mlo:mll5961 transposase; transposase IS204/IS1001/IS1096/IS1165 family protein complement(5109841..5110926) Methylobacterium extorquens CM4 7118259 YP_002423508.1 CDS Mchl_4810 NC_011757.1 5111035 5111331 D KEGG: mpo:Mpop_3985 hypothetical protein; hypothetical protein 5111035..5111331 Methylobacterium extorquens CM4 7118260 YP_002423509.1 CDS Mchl_4811 NC_011757.1 5111481 5111981 D PFAM: ROSMUCR transcriptional regulator; KEGG: mpo:Mpop_1345 MucR family transcriptional regulator; MucR family transcriptional regulator 5111481..5111981 Methylobacterium extorquens CM4 7118261 YP_002423510.1 CDS Mchl_4812 NC_011757.1 5112434 5116705 R KEGG: mex:Mext_0136 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(5112434..5116705) Methylobacterium extorquens CM4 7118262 YP_002423511.1 CDS Mchl_4813 NC_011757.1 5116882 5117163 D PFAM: transposase IS3/IS911 family protein; KEGG: mex:Mext_3530 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 5116882..5117163 Methylobacterium extorquens CM4 7118263 YP_002423512.1 CDS Mchl_4814 NC_011757.1 5117271 5118023 D PFAM: integrase catalytic region; KEGG: mex:Mext_3531 integrase catalytic region; integrase catalytic subunit 5117271..5118023 Methylobacterium extorquens CM4 7118264 YP_002423513.1 CDS Mchl_4815 NC_011757.1 5118624 5119019 D PFAM: protein of unknown function DUF1469; KEGG: met:M446_6820 hypothetical protein; hypothetical protein 5118624..5119019 Methylobacterium extorquens CM4 7118265 YP_002423514.1 CDS Mchl_4816 NC_011757.1 5119016 5120389 D KEGG: met:M446_0738 hypothetical protein; hypothetical protein 5119016..5120389 Methylobacterium extorquens CM4 7118266 YP_002423515.1 CDS Mchl_4817 NC_011757.1 5120669 5121484 D PFAM: UspA domain protein; KEGG: mex:Mext_0489 UspA domain-containing protein; UspA domain-containing protein 5120669..5121484 Methylobacterium extorquens CM4 7118267 YP_002423516.1 CDS Mchl_4818 NC_011757.1 5122317 5123075 D PFAM: chemotaxis sensory transducer; KEGG: mpo:Mpop_3344 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5122317..5123075 Methylobacterium extorquens CM4 7118268 YP_002423517.1 CDS Mchl_4819 NC_011757.1 5123577 5123933 R KEGG: mrd:Mrad2831_0060 hypothetical protein; hypothetical protein complement(5123577..5123933) Methylobacterium extorquens CM4 7118269 YP_002423518.1 CDS Mchl_4820 NC_011757.1 5124394 5124654 D KEGG: mrd:Mrad2831_2038 hypothetical protein; hypothetical protein 5124394..5124654 Methylobacterium extorquens CM4 7118270 YP_002423519.1 CDS Mchl_4821 NC_011757.1 5124817 5125089 R KEGG: mrd:Mrad2831_4949 hypothetical protein; hypothetical protein complement(5124817..5125089) Methylobacterium extorquens CM4 7118271 YP_002423520.1 CDS Mchl_4822 NC_011757.1 5126199 5126558 D KEGG: mpo:Mpop_2346 hypothetical protein; hypothetical protein 5126199..5126558 Methylobacterium extorquens CM4 7118272 YP_002423521.1 CDS Mchl_4823 NC_011757.1 5126764 5127306 R KEGG: bpy:Bphyt_4763 hypothetical protein; hypothetical protein complement(5126764..5127306) Methylobacterium extorquens CM4 7118273 YP_002423522.1 CDS Mchl_4824 NC_011757.1 5128691 5128831 R hypothetical protein complement(5128691..5128831) Methylobacterium extorquens CM4 7118274 YP_002423523.1 CDS Mchl_4825 NC_011757.1 5129004 5129111 R hypothetical protein complement(5129004..5129111) Methylobacterium extorquens CM4 7118275 YP_002423524.1 CDS Mchl_4826 NC_011757.1 5129239 5129397 D KEGG: mpo:Mpop_0877 hypothetical protein; hypothetical protein 5129239..5129397 Methylobacterium extorquens CM4 7118276 YP_002423525.1 CDS Mchl_4827 NC_011757.1 5129399 5130358 D PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: cak:Caul_5148 AraC family transcriptional regulator; AraC family transcriptional regulator 5129399..5130358 Methylobacterium extorquens CM4 7118277 YP_002423526.1 CDS Mchl_4828 NC_011757.1 5130636 5130779 R KEGG: bpt:Bpet3011 tautomerase; tautomerase complement(5130636..5130779) Methylobacterium extorquens CM4 7118278 YP_002423527.1 CDS Mchl_4829 NC_011757.1 5131041 5138069 R PFAM: Hemolysin-type calcium-binding region; Animal haem peroxidase; KEGG: rpe:RPE_1007 heme peroxidase; heme peroxidase complement(5131041..5138069) Methylobacterium extorquens CM4 7118279 YP_002423528.1 CDS Mchl_4833 NC_011757.1 5139318 5139740 D KEGG: mpo:Mpop_4256 hypothetical protein; hypothetical protein 5139318..5139740 Methylobacterium extorquens CM4 7118284 YP_002423529.1 CDS Mchl_4834 NC_011757.1 5139824 5140231 D PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_3522 helix-turn-helix domain-containing protein; XRE family transcriptional regulator 5139824..5140231 Methylobacterium extorquens CM4 7118285 YP_002423530.1 CDS Mchl_4835 NC_011757.1 5140343 5140588 D hypothetical protein 5140343..5140588 Methylobacterium extorquens CM4 7118286 YP_002423531.1 CDS Mchl_4837 NC_011757.1 5146360 5147043 D PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_4361 ThiJ/PfpI domain-containing protein; ThiJ/PfpI domain-containing protein 5146360..5147043 Methylobacterium extorquens CM4 7118288 YP_002423532.1 CDS Mchl_4838 NC_011757.1 5147158 5148567 D PFAM: amidase; KEGG: msm:MSMEG_3970 glutamyl-tRNA(Gln) amidotransferase subunit A; amidase 5147158..5148567 Methylobacterium extorquens CM4 7118289 YP_002423533.1 CDS Mchl_4839 NC_011757.1 5148826 5149512 R PFAM: peptidase membrane zinc metallopeptidase KEGG: mex:Mext_4363 peptidase membrane zinc metallopeptidase; peptidase membrane zinc metallopeptidase complement(5148826..5149512) Methylobacterium extorquens CM4 7118290 YP_002423534.1 CDS Mchl_4840 NC_011757.1 5149736 5151352 R PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: mex:Mext_4364 thioredoxin-disulfide reductase; cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(5149736..5151352) Methylobacterium extorquens CM4 7118291 YP_002423535.1 CDS Mchl_4841 NC_011757.1 5151649 5152554 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_4365 helix-turn-helix domain-containing protein; AraC family transcriptional regulator complement(5151649..5152554) Methylobacterium extorquens CM4 7118292 YP_002423536.1 CDS Mchl_4842 NC_011757.1 5152709 5153287 D KEGG: mex:Mext_4366 hypothetical protein; hypothetical protein 5152709..5153287 Methylobacterium extorquens CM4 7118293 YP_002423537.1 CDS Mchl_4843 NC_011757.1 5153468 5154730 R PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_4367 amine oxidase; amine oxidase complement(5153468..5154730) Methylobacterium extorquens CM4 7118294 YP_002423538.1 CDS Mchl_4844 NC_011757.1 5155035 5155763 D PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_4368 ThiJ/PfpI domain-containing protein; ThiJ/PfpI domain-containing protein 5155035..5155763 Methylobacterium extorquens CM4 7118295 YP_002423539.1 CDS Mchl_4845 NC_011757.1 5156195 5156623 R KEGG: mex:Mext_4369 hypothetical protein; hypothetical protein complement(5156195..5156623) Methylobacterium extorquens CM4 7118296 YP_002423540.1 CDS Mchl_4846 NC_011757.1 5156835 5157860 D KEGG: mex:Mext_4370 ABC-type nitrate/sulfonate/bicarbonate transporters periplasmic components-like protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 5156835..5157860 Methylobacterium extorquens CM4 7118297 YP_002423541.1 CDS Mchl_4847 NC_011757.1 5157880 5158632 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_4371 binding-protein-dependent transport systems inner membrane component; ABC transporter inner membrane protein 5157880..5158632 Methylobacterium extorquens CM4 7118298 YP_002423542.1 CDS Mchl_4848 NC_011757.1 5158629 5159390 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_4372 ABC transporter; ABC transporter 5158629..5159390 Methylobacterium extorquens CM4 7118299 YP_002423543.1 CDS Mchl_4849 NC_011757.1 5159504 5159938 D KEGG: mex:Mext_4373 hypothetical protein; hypothetical protein 5159504..5159938 Methylobacterium extorquens CM4 7118300 YP_002423544.1 CDS Mchl_4850 NC_011757.1 5160078 5160269 D KEGG: mex:Mext_4374 hypothetical protein; hypothetical protein 5160078..5160269 Methylobacterium extorquens CM4 7118301 YP_002423545.1 CDS Mchl_4851 NC_011757.1 5160573 5162192 R TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: mex:Mext_4375 peptide chain release factor 3; peptide chain release factor 3 complement(5160573..5162192) Methylobacterium extorquens CM4 7118302 YP_002423546.1 CDS Mchl_4852 NC_011757.1 5162299 5163042 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4376 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(5162299..5163042) Methylobacterium extorquens CM4 7118303 YP_002423547.1 CDS Mchl_4853 NC_011757.1 5163672 5164160 R KEGG: mex:Mext_4390 hypothetical protein; hypothetical protein complement(5163672..5164160) Methylobacterium extorquens CM4 7118305 YP_002423548.1 CDS Mchl_4855 NC_011757.1 5165588 5166778 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(5165588..5166778) Methylobacterium extorquens CM4 7118307 YP_002423549.1 CDS Mchl_4856 NC_011757.1 5166901 5167176 R PFAM: RNA-binding S4 domain protein; KEGG: mex:Mext_4393 RNA-binding S4 domain-containing protein; RNA-binding S4 domain-containing protein complement(5166901..5167176) Methylobacterium extorquens CM4 7118308 YP_002423550.1 CDS Mchl_4857 NC_011757.1 5167253 5170663 R PFAM: helicase; KEGG: mex:Mext_4394 helicase domain-containing protein; helicase complement(5167253..5170663) Methylobacterium extorquens CM4 7118309 YP_002423551.1 CDS Mchl_4858 NC_011757.1 5170853 5171197 R KEGG: mex:Mext_4395 hypothetical protein; hypothetical protein complement(5170853..5171197) Methylobacterium extorquens CM4 7114279 YP_002423552.1 CDS Mchl_4859 NC_011757.1 5171413 5172309 R KEGG: mex:Mext_4396 hypothetical protein; hypothetical protein complement(5171413..5172309) Methylobacterium extorquens CM4 7114280 YP_002423553.1 CDS Mchl_4860 NC_011757.1 5172574 5173119 D PFAM: Heme NO binding domain protein; KEGG: mex:Mext_4397 heme NO binding domain-containing protein; heme NO binding domain-containing protein 5172574..5173119 Methylobacterium extorquens CM4 7114281 YP_002423554.1 CDS Mchl_4861 NC_011757.1 5173127 5174671 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_4398 diguanylate cyclase; diguanylate cyclase/phosphodiesterase 5173127..5174671 Methylobacterium extorquens CM4 7114282 YP_002423555.1 CDS Mchl_4862 NC_011757.1 5174685 5175686 R PFAM: glucokinase; KEGG: mex:Mext_4399 glucokinase; glucokinase complement(5174685..5175686) Methylobacterium extorquens CM4 7114283 YP_002423556.1 CDS Mchl_4863 NC_011757.1 5175777 5176532 R KEGG: mex:Mext_4400 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; HAD-superfamily hydrolase complement(5175777..5176532) Methylobacterium extorquens CM4 7114284 YP_002423557.1 CDS Mchl_4864 NC_011757.1 5176619 5177113 D PFAM: protein of unknown function DUF427; KEGG: mex:Mext_4401 hypothetical protein; hypothetical protein 5176619..5177113 Methylobacterium extorquens CM4 7114285 YP_002423558.1 CDS Mchl_4865 NC_011757.1 5177374 5178591 D PFAM: beta-lactamase; KEGG: mex:Mext_4402 beta-lactamase; beta-lactamase 5177374..5178591 Methylobacterium extorquens CM4 7114286 YP_002423559.1 CDS Mchl_4866 NC_011757.1 5178762 5180741 D TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: mex:Mext_4403 choline/carnitine/betaine transporter; choline/carnitine/betaine transporter 5178762..5180741 Methylobacterium extorquens CM4 7114287 YP_002423560.1 CDS Mchl_4867 NC_011757.1 5181236 5181709 D PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: mex:Mext_4404 NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit 5181236..5181709 Methylobacterium extorquens CM4 7114288 YP_002423561.1 CDS Mchl_4868 NC_011757.1 5181706 5183265 D PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mex:Mext_4405 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 5181706..5183265 Methylobacterium extorquens CM4 7114289 YP_002423562.1 CDS Mchl_4869 NC_011757.1 5183278 5186130 D TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; 4Fe-4S ferredoxin iron-sulphur binding, conserved site; KEGG: mex:Mext_4406 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha 5183278..5186130 Methylobacterium extorquens CM4 7114290 YP_002423563.1 CDS Mchl_4870 NC_011757.1 5186238 5186528 D KEGG: mex:Mext_4407 hypothetical protein; hypothetical protein 5186238..5186528 Methylobacterium extorquens CM4 7114291 YP_002423564.1 CDS Mchl_4871 NC_011757.1 5186620 5187555 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4408 LysR substrate-binding; LysR family transcriptional regulator 5186620..5187555 Methylobacterium extorquens CM4 7114292 YP_002423565.1 CDS Mchl_4872 NC_011757.1 5187628 5188074 R KEGG: mex:Mext_4409 hypothetical protein; hypothetical protein complement(5187628..5188074) Methylobacterium extorquens CM4 7114293 YP_002423566.1 CDS Mchl_4873 NC_011757.1 5188142 5189176 R TIGRFAM: small GTP-binding protein; GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: mex:Mext_4410 GTP-binding protein Obg/CgtA; GTP-binding protein Obg/CgtA complement(5188142..5189176) Methylobacterium extorquens CM4 7114294 YP_002423567.1 CDS Mchl_4874 NC_011757.1 5189213 5189692 R KEGG: mex:Mext_4411 hypothetical protein; hypothetical protein complement(5189213..5189692) Methylobacterium extorquens CM4 7114295 YP_002423568.1 CDS Mchl_4875 NC_011757.1 5189689 5190288 R PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_4412 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(5189689..5190288) Methylobacterium extorquens CM4 7114296 YP_002423569.1 CDS rpmA NC_011757.1 5190477 5190743 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(5190477..5190743) Methylobacterium extorquens CM4 7114297 YP_002423570.1 CDS rplU NC_011757.1 5190792 5191184 R PFAM: ribosomal protein L21; KEGG: mex:Mext_4414 ribosomal protein L21; 50S ribosomal protein L21 complement(5190792..5191184) Methylobacterium extorquens CM4 7114298 YP_002423571.1 CDS Mchl_4878 NC_011757.1 5191380 5192945 R PFAM: protein of unknown function DUF853 NPT hydrolase KEGG: mex:Mext_4415 protein of unknown function DUF853 NPT hydrolase; hypothetical protein complement(5191380..5192945) Methylobacterium extorquens CM4 7114299 YP_002423572.1 CDS Mchl_4879 NC_011757.1 5193100 5193486 D KEGG: mex:Mext_4416 hypothetical protein; hypothetical protein 5193100..5193486 Methylobacterium extorquens CM4 7114300 YP_002423573.1 CDS Mchl_4880 NC_011757.1 5193699 5194697 D KEGG: mex:Mext_4417 hypothetical protein; hypothetical protein 5193699..5194697 Methylobacterium extorquens CM4 7114301 YP_002423574.1 CDS Mchl_4881 NC_011757.1 5194774 5195943 D PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4418 major facilitator transporter; major facilitator superfamily protein 5194774..5195943 Methylobacterium extorquens CM4 7114302 YP_002423575.1 CDS Mchl_4882 NC_011757.1 5196045 5196173 D KEGG: mpo:Mpop_4928 hypothetical protein; hypothetical protein 5196045..5196173 Methylobacterium extorquens CM4 7114303 YP_002423576.1 CDS Mchl_4883 NC_011757.1 5196527 5196775 D KEGG: mex:Mext_4419 hypothetical protein; hypothetical protein 5196527..5196775 Methylobacterium extorquens CM4 7114304 YP_002423577.1 CDS Mchl_4884 NC_011757.1 5196788 5197981 R PFAM: patatin; KEGG: mex:Mext_4420 patatin; patatin complement(5196788..5197981) Methylobacterium extorquens CM4 7114305 YP_002423578.1 CDS Mchl_4885 NC_011757.1 5198439 5198990 D KEGG: mex:Mext_4421 hypothetical protein; hypothetical protein 5198439..5198990 Methylobacterium extorquens CM4 7114306 YP_002423579.1 CDS Mchl_4886 NC_011757.1 5199195 5199410 D KEGG: mex:Mext_4422 hypothetical protein; hypothetical protein 5199195..5199410 Methylobacterium extorquens CM4 7114307 YP_002423580.1 CDS Mchl_4887 NC_011757.1 5199407 5199925 D KEGG: mex:Mext_4423 hypothetical protein; hypothetical protein 5199407..5199925 Methylobacterium extorquens CM4 7114308 YP_002423581.1 CDS Mchl_4888 NC_011757.1 5200002 5200901 D PFAM: diacylglycerol kinase; KEGG: mex:Mext_4424 diacylglycerol kinase; diacylglycerol kinase 5200002..5200901 Methylobacterium extorquens CM4 7114309 YP_002423582.1 CDS Mchl_4889 NC_011757.1 5200898 5201782 D PFAM: metallophosphoesterase; KEGG: mex:Mext_4425 metallophosphoesterase; metallophosphoesterase 5200898..5201782 Methylobacterium extorquens CM4 7114310 YP_002423583.1 CDS Mchl_4890 NC_011757.1 5201810 5203270 R PFAM: Na+/solute symporter; KEGG: mex:Mext_4426 Na+/solute symporter; Na+/solute symporter complement(5201810..5203270) Methylobacterium extorquens CM4 7114311 YP_002423584.1 CDS Mchl_4891 NC_011757.1 5203267 5203470 R KEGG: mex:Mext_4427 hypothetical protein; hypothetical protein complement(5203267..5203470) Methylobacterium extorquens CM4 7114312 YP_002423585.1 CDS Mchl_4892 NC_011757.1 5203650 5205752 R KEGG: mex:Mext_4428 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase complement(5203650..5205752) Methylobacterium extorquens CM4 7114313 YP_002423586.1 CDS Mchl_4893 NC_011757.1 5205956 5206405 R KEGG: mex:Mext_4429 hypothetical protein; hypothetical protein complement(5205956..5206405) Methylobacterium extorquens CM4 7114314 YP_002423587.1 CDS Mchl_4894 NC_011757.1 5206467 5207213 R PFAM: nucleotidyl transferase; KEGG: mex:Mext_4430 nucleotidyl transferase; nucleotidyl transferase complement(5206467..5207213) Methylobacterium extorquens CM4 7114315 YP_002423588.1 CDS Mchl_4895 NC_011757.1 5207247 5208875 R PFAM: aminoglycoside phosphotransferase; protein of unknown function UPF0079; KEGG: mex:Mext_4431 hypothetical protein; hypothetical protein complement(5207247..5208875) Methylobacterium extorquens CM4 7114316 YP_002423589.1 CDS Mchl_4896 NC_011757.1 5209135 5211663 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; SMART: PAS domain containing protein; KEGG: mex:Mext_4432 ATPase domain-containing protein; PAS/PAC sensor signal transduction histidine kinase complement(5209135..5211663) Methylobacterium extorquens CM4 7114317 YP_002423590.1 CDS Mchl_4897 NC_011757.1 5212153 5213559 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(5212153..5213559) Methylobacterium extorquens CM4 7114318 YP_002423591.1 CDS Mchl_4898 NC_011757.1 5213729 5215417 R PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_4434 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(5213729..5215417) Methylobacterium extorquens CM4 7114319 YP_002423592.1 CDS Mchl_4899 NC_011757.1 5215495 5216106 R PFAM: nitroreductase; KEGG: mex:Mext_4435 nitroreductase; nitroreductase complement(5215495..5216106) Methylobacterium extorquens CM4 7114320 YP_002423593.1 CDS Mchl_4900 NC_011757.1 5216350 5217150 D PFAM: enoyl-CoA hydratase/isomerase; KEGG: mex:Mext_4436 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 5216350..5217150 Methylobacterium extorquens CM4 7114321 YP_002423594.1 CDS Mchl_4901 NC_011757.1 5217257 5218036 D PFAM: endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_4437 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 5217257..5218036 Methylobacterium extorquens CM4 7114322 YP_002423595.1 CDS Mchl_4902 NC_011757.1 5217927 5219363 R PFAM: phospholipase D/transphosphatidylase; KEGG: mex:Mext_4438 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase complement(5217927..5219363) Methylobacterium extorquens CM4 7114323 YP_002423596.1 CDS Mchl_4903 NC_011757.1 5219589 5222732 D TIGRFAM: double-strand break repair protein AddB; KEGG: mex:Mext_4439 double-strand break repair protein AddB; double-strand break repair protein AddB 5219589..5222732 Methylobacterium extorquens CM4 7114324 YP_002423597.1 CDS Mchl_4904 NC_011757.1 5222729 5226172 D TIGRFAM: double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; KEGG: mex:Mext_4440 double-strand break repair helicase AddA; double-strand break repair helicase AddA 5222729..5226172 Methylobacterium extorquens CM4 7114325 YP_002423598.1 CDS Mchl_4905 NC_011757.1 5226269 5227555 R PFAM: glucose sorbosone dehydrogenase; KEGG: mex:Mext_4441 glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase complement(5226269..5227555) Methylobacterium extorquens CM4 7114326 YP_002423599.1 CDS Mchl_4906 NC_011757.1 5227931 5228251 D TIGRFAM: thioredoxin; PFAM: thioredoxin domain; KEGG: mex:Mext_4442 thioredoxin; thioredoxin 5227931..5228251 Methylobacterium extorquens CM4 7114327 YP_002423600.1 CDS Mchl_4907 NC_011757.1 5228409 5229299 R KEGG: mex:Mext_4443 porin; porin complement(5228409..5229299) Methylobacterium extorquens CM4 7114328 YP_002423601.1 CDS Mchl_4908 NC_011757.1 5229688 5231013 R TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; KEGG: mex:Mext_4444 FolC bifunctional protein; FolC bifunctional protein complement(5229688..5231013) Methylobacterium extorquens CM4 7114329 YP_002423602.1 CDS Mchl_4909 NC_011757.1 5231046 5231969 R TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit beta; KEGG: mex:Mext_4445 acetyl-CoA carboxylase, carboxyl transferase subunit beta; acetyl-CoA carboxylase, carboxyl transferase subunit beta complement(5231046..5231969) Methylobacterium extorquens CM4 7114330 YP_002423603.1 CDS trpA NC_011757.1 5232080 5232922 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(5232080..5232922) Methylobacterium extorquens CM4 7114331 YP_002423604.1 CDS Mchl_4911 NC_011757.1 5233094 5234053 R PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; KEGG: mex:Mext_4447 NUDIX hydrolase; NUDIX hydrolase complement(5233094..5234053) Methylobacterium extorquens CM4 7114332 YP_002423605.1 CDS Mchl_4912 NC_011757.1 5234064 5234480 R PFAM: histidine triad (HIT) protein; KEGG: mex:Mext_4448 histidine triad (HIT) protein; histidine triad (HIT) protein complement(5234064..5234480) Methylobacterium extorquens CM4 7114333 YP_002423606.1 CDS Mchl_4913 NC_011757.1 5234657 5235721 D PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mex:Mext_4449 metal-dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase 5234657..5235721 Methylobacterium extorquens CM4 7114334 YP_002423607.1 CDS Mchl_4914 NC_011757.1 5236060 5237766 D PFAM: helicase; DbpA RNA-binding domain protein; DEAD/DEAH box helicase; SMART: DEAD-like helicases; KEGG: mex:Mext_4450 DEAD/DEAH box helicase domain-containing protein; DEAD/DEAH box helicase 5236060..5237766 Methylobacterium extorquens CM4 7114335 YP_002423608.1 CDS Mchl_4915 NC_011757.1 5237863 5238753 R KEGG: mex:Mext_4451 hypothetical protein; hypothetical protein complement(5237863..5238753) Methylobacterium extorquens CM4 7114336 YP_002423609.1 CDS Mchl_4916 NC_011757.1 5239181 5240710 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mex:Mext_4452 ATPase domain-containing protein; histidine kinase 5239181..5240710 Methylobacterium extorquens CM4 7114337 YP_002423610.1 CDS Mchl_4917 NC_011757.1 5240745 5241410 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_4453 response regulator receiver; LuxR family transcriptional regulator 5240745..5241410 Methylobacterium extorquens CM4 7114338 YP_002423611.1 CDS Mchl_4918 NC_011757.1 5241438 5242121 D PFAM: TENA/THI-4 domain protein; KEGG: mex:Mext_4454 TenA/THI-4 domain-containing protein; TenA family transcriptional regulator 5241438..5242121 Methylobacterium extorquens CM4 7114339 YP_002423612.1 CDS Mchl_4919 NC_011757.1 5242286 5243776 D PFAM: amino acid permease-associated region; KEGG: mex:Mext_4455 amino acid permease-associated region; amino acid permease-associated protein 5242286..5243776 Methylobacterium extorquens CM4 7114340 YP_002423613.1 CDS Mchl_4920 NC_011757.1 5243976 5244881 R PFAM: beta-lactamase; KEGG: mex:Mext_4456 beta-lactamase domain-containing protein; beta-lactamase complement(5243976..5244881) Methylobacterium extorquens CM4 7114341 YP_002423614.1 CDS Mchl_4921 NC_011757.1 5245073 5246293 R KEGG: mex:Mext_4457 hypothetical protein; hypothetical protein complement(5245073..5246293) Methylobacterium extorquens CM4 7114342 YP_002423615.1 CDS Mchl_4922 NC_011757.1 5246389 5248992 R KEGG: mex:Mext_4458 ABC-type multidrug transporter ATPase and permeases-like protein; multidrug ABC transporter ATPase/permease complement(5246389..5248992) Methylobacterium extorquens CM4 7114343 YP_002423616.1 CDS Mchl_4923 NC_011757.1 5249429 5251357 D KEGG: mex:Mext_4459 hypothetical protein; hypothetical protein 5249429..5251357 Methylobacterium extorquens CM4 7114344 YP_002423617.1 CDS Mchl_4924 NC_011757.1 5251354 5252583 D KEGG: mex:Mext_4460 hypothetical protein; hypothetical protein 5251354..5252583 Methylobacterium extorquens CM4 7114345 YP_002423618.1 CDS Mchl_4925 NC_011757.1 5252642 5253463 D PFAM: glutamine amidotransferase class-II; KEGG: mex:Mext_4461 glutamine amidotransferase class-II; class II glutamine amidotransferase 5252642..5253463 Methylobacterium extorquens CM4 7114346 YP_002423619.1 CDS Mchl_4926 NC_011757.1 5253711 5254445 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_4462 sigma-70 family RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 5253711..5254445 Methylobacterium extorquens CM4 7114347 YP_002423620.1 CDS Mchl_4927 NC_011757.1 5255155 5255688 R PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4463 ROSMUCR transcriptional regulator; MucR family transcriptional regulator complement(5255155..5255688) Methylobacterium extorquens CM4 7114348 YP_002423621.1 CDS Mchl_4928 NC_011757.1 5256060 5256458 R KEGG: mex:Mext_4464 hypothetical protein; hypothetical protein complement(5256060..5256458) Methylobacterium extorquens CM4 7114349 YP_002423622.1 CDS Mchl_4929 NC_011757.1 5256694 5257869 D KEGG: mex:Mext_4465 hypothetical protein; hypothetical protein 5256694..5257869 Methylobacterium extorquens CM4 7114350 YP_002423623.1 CDS Mchl_4930 NC_011757.1 5258028 5258348 R PFAM: ferredoxin; KEGG: mex:Mext_4466 ferredoxin; ferredoxin complement(5258028..5258348) Methylobacterium extorquens CM4 7114351 YP_002423624.1 CDS Mchl_4931 NC_011757.1 5258564 5259121 R PFAM: Hpt domain protein; KEGG: mex:Mext_4467 Hpt domain-containing protein; CheA signal transduction histidine kinase complement(5258564..5259121) Methylobacterium extorquens CM4 7114352 YP_002423625.1 CDS Mchl_4932 NC_011757.1 5259270 5267663 D PFAM: Apolipoprotein A1/A4/E; KEGG: mex:Mext_4468 hypothetical protein; Apolipoprotein A1/A4/E 5259270..5267663 Methylobacterium extorquens CM4 7114353 YP_002423626.1 CDS Mchl_4933 NC_011757.1 5267819 5268448 R PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: mex:Mext_4469 helix-turn-helix domain-containing protein; XRE family transcriptional regulator complement(5267819..5268448) Methylobacterium extorquens CM4 7114354 YP_002423627.1 CDS Mchl_4934 NC_011757.1 5268625 5269431 R KEGG: mex:Mext_4470 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase complement(5268625..5269431) Methylobacterium extorquens CM4 7114355 YP_002423628.1 CDS Mchl_4935 NC_011757.1 5269479 5270204 R PFAM: thiamine monophosphate synthase; KEGG: mex:Mext_4471 thiamine-phosphate diphosphorylase; thiamine-phosphate diphosphorylase complement(5269479..5270204) Methylobacterium extorquens CM4 7114356 YP_002423629.1 CDS Mchl_4936 NC_011757.1 5270330 5271436 D KEGG: mex:Mext_4472 hypothetical protein; hypothetical protein 5270330..5271436 Methylobacterium extorquens CM4 7114357 YP_002423630.1 CDS Mchl_4937 NC_011757.1 5271501 5271776 R KEGG: mex:Mext_4473 hypothetical protein; hypothetical protein complement(5271501..5271776) Methylobacterium extorquens CM4 7114358 YP_002423631.1 CDS Mchl_4938 NC_011757.1 5272094 5272624 R PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4474 ROSMUCR transcriptional regulator; MucR family transcriptional regulator complement(5272094..5272624) Methylobacterium extorquens CM4 7114359 YP_002423632.1 CDS Mchl_4939 NC_011757.1 5273560 5274504 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase complement(5273560..5274504) Methylobacterium extorquens CM4 7114360 YP_002423633.1 CDS Mchl_4940 NC_011757.1 5274758 5275297 D KEGG: mex:Mext_4476 hypothetical protein; hypothetical protein 5274758..5275297 Methylobacterium extorquens CM4 7116960 YP_002423634.1 CDS Mchl_4941 NC_011757.1 5275351 5276160 R TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_4477 molybdenum ABC transporter periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein complement(5275351..5276160) Methylobacterium extorquens CM4 7114938 YP_002423635.1 CDS Mchl_4942 NC_011757.1 5276329 5276499 R KEGG: mex:Mext_4478 hypothetical protein; hypothetical protein complement(5276329..5276499) Methylobacterium extorquens CM4 7114939 YP_002423636.1 CDS Mchl_4943 NC_011757.1 5276592 5276792 R KEGG: mpo:Mpop_4992 hypothetical protein; hypothetical protein complement(5276592..5276792) Methylobacterium extorquens CM4 7114940 YP_002423637.1 CDS Mchl_4944 NC_011757.1 5277117 5278034 D PFAM: ribosomal L11 methyltransferase; KEGG: mex:Mext_4479 ribosomal L11 methyltransferase; ribosomal L11 methyltransferase 5277117..5278034 Methylobacterium extorquens CM4 7114941 YP_002423638.1 CDS Mchl_4945 NC_011757.1 5278276 5280114 D PFAM: creatinase; peptidase M24; KEGG: mex:Mext_4480 peptidase M24; peptidase M24 5278276..5280114 Methylobacterium extorquens CM4 7114942 YP_002423639.1 CDS Mchl_4946 NC_011757.1 5280111 5280590 D PFAM: protein-tyrosine phosphatase, low molecular weight; KEGG: mex:Mext_4481 low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase 5280111..5280590 Methylobacterium extorquens CM4 7114943 YP_002423640.1 CDS Mchl_4947 NC_011757.1 5280587 5281393 D PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: mex:Mext_4482 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 5280587..5281393 Methylobacterium extorquens CM4 7114944 YP_002423641.1 CDS Mchl_4948 NC_011757.1 5281559 5283673 R PFAM: ABC transporter; SbmABacA family protein; ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_4485 ABC transporter; ABC transporter complement(5281559..5283673) Methylobacterium extorquens CM4 7114945 YP_002423642.1 CDS Mchl_4949 NC_011757.1 5283946 5284275 R KEGG: mex:Mext_4486 hypothetical protein; hypothetical protein complement(5283946..5284275) Methylobacterium extorquens CM4 7114946 YP_002423643.1 CDS Mchl_4950 NC_011757.1 5284509 5285222 D KEGG: mex:Mext_4487 hypothetical protein; hypothetical protein 5284509..5285222 Methylobacterium extorquens CM4 7114947 YP_002423644.1 CDS Mchl_4951 NC_011757.1 5285230 5286150 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_4488 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(5285230..5286150) Methylobacterium extorquens CM4 7114948 YP_002423645.1 CDS Mchl_4952 NC_011757.1 5286147 5286773 R PFAM: glutathione S-transferase domain; KEGG: mex:Mext_4489 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein complement(5286147..5286773) Methylobacterium extorquens CM4 7114949 YP_002423646.1 CDS Mchl_4953 NC_011757.1 5286918 5287823 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4490 LysR substrate-binding; LysR family transcriptional regulator 5286918..5287823 Methylobacterium extorquens CM4 7114950 YP_002423647.1 CDS Mchl_4954 NC_011757.1 5287853 5289457 R Catalyzes the reduction of sulfite to sulfide, an essential step in the anaerobic sulfate-respiration pathway; sulfite reductase complement(5287853..5289457) Methylobacterium extorquens CM4 7114951 YP_002423648.1 CDS nirA NC_011757.1 5289454 5291244 R ferredoxin-dependent assimilatory nitrite reductase; ferredoxin-nitrite reductase complement(5289454..5291244) Methylobacterium extorquens CM4 7114952 YP_002423649.1 CDS Mchl_4956 NC_011757.1 5291256 5292476 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: mex:Mext_4493 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(5291256..5292476) Methylobacterium extorquens CM4 7114953 YP_002423650.1 CDS Mchl_4957 NC_011757.1 5292502 5293296 R KEGG: mex:Mext_4494 nitrate ABC transporter ATPase subunits C and D; TIGRFAM: nitrate ABC transporter ATPases C and D; PFAM: ABC transporter; SMART: ATPase AAA; nitrate ABC transporter ATPases C and D complement(5292502..5293296) Methylobacterium extorquens CM4 7114954 YP_002423651.1 CDS Mchl_4958 NC_011757.1 5293309 5294166 R TIGRFAM: nitrate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_4495 nitrate ABC transporter inner membrane subunit; nitrate ABC transporter inner membrane subunit complement(5293309..5294166) Methylobacterium extorquens CM4 7114955 YP_002423652.1 CDS Mchl_4959 NC_011757.1 5294166 5295458 R KEGG: mex:Mext_4496 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal complement(5294166..5295458) Methylobacterium extorquens CM4 7114956 YP_002423653.1 CDS Mchl_4960 NC_011757.1 5295787 5296803 R KEGG: mex:Mext_4497 nitrate transporter; nitrate transporter complement(5295787..5296803) Methylobacterium extorquens CM4 7114957 YP_002423654.1 CDS Mchl_4961 NC_011757.1 5296800 5297387 R PFAM: response regulator receiver; ANTAR domain protein; KEGG: mex:Mext_4498 ANTAR domain-containing protein; response regulator receiver and ANTAR domain-containing protein complement(5296800..5297387) Methylobacterium extorquens CM4 7114958 YP_002423655.1 CDS Mchl_4962 NC_011757.1 5297640 5298260 D KEGG: mex:Mext_4499 hypothetical protein; hypothetical protein 5297640..5298260 Methylobacterium extorquens CM4 7114959 YP_002423656.1 CDS Mchl_4963 NC_011757.1 5298482 5300341 D PFAM: glycoside hydrolase 15-related; KEGG: mex:Mext_4500 glycoside hydrolase 15-related; glycoside hydrolase 15-like protein 5298482..5300341 Methylobacterium extorquens CM4 7114960 YP_002423657.1 CDS Mchl_4964 NC_011757.1 5300392 5302467 D TIGRFAM: transketolase; PFAM: transketolase domain protein; transketolase; KEGG: mex:Mext_4501 transketolase; transketolase 5300392..5302467 Methylobacterium extorquens CM4 7114961 YP_002423658.1 CDS Mchl_4965 NC_011757.1 5302687 5305512 D catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; catalyzes isomerization of glucose 6-phosphate and fructose 6-phosphate; bifunctional transaldolase/phosoglucose isomerase 5302687..5305512 Methylobacterium extorquens CM4 7114962 YP_002423659.1 CDS Mchl_4966 NC_011757.1 5305811 5306455 R PFAM: hypothetical protein; KEGG: mex:Mext_4503 hypothetical protein; hypothetical protein complement(5305811..5306455) Methylobacterium extorquens CM4 7114963 YP_002423660.1 CDS Mchl_4967 NC_011757.1 5306552 5306821 R KEGG: mex:Mext_4504 hypothetical protein; hypothetical protein complement(5306552..5306821) Methylobacterium extorquens CM4 7114964 YP_002423661.1 CDS Mchl_4968 NC_011757.1 5306890 5308350 R KEGG: mex:Mext_4505 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor complement(5306890..5308350) Methylobacterium extorquens CM4 7114965 YP_002423662.1 CDS Mchl_4969 NC_011757.1 5308773 5309645 R KEGG: mex:Mext_4506 hypothetical protein; hypothetical protein complement(5308773..5309645) Methylobacterium extorquens CM4 7114966 YP_002423663.1 CDS Mchl_4970 NC_011757.1 5309829 5310863 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4507 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(5309829..5310863) Methylobacterium extorquens CM4 7114967 YP_002423664.1 CDS Mchl_4971 NC_011757.1 5311030 5314239 R TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_4508 hydrophobe/amphiphile efflux-1 (HAE1) family protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(5311030..5314239) Methylobacterium extorquens CM4 7114968 YP_002423665.1 CDS Mchl_4972 NC_011757.1 5314402 5315547 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mex:Mext_4509 RND family efflux transporter MFP subunit; efflux transporter RND family MFP subunit complement(5314402..5315547) Methylobacterium extorquens CM4 7114969 YP_002423666.1 CDS Mchl_4973 NC_011757.1 5315667 5315990 R PFAM: rhodanese; KEGG: mex:Mext_4510 rhodanese; rhodanese complement(5315667..5315990) Methylobacterium extorquens CM4 7114970 YP_002423667.1 CDS Mchl_4974 NC_011757.1 5316039 5317409 R PFAM: glycosyl transferase group 1; KEGG: mex:Mext_4511 glycosyl transferase group 1; group 1 glycosyl transferase complement(5316039..5317409) Methylobacterium extorquens CM4 7114971 YP_002423668.1 CDS Mchl_4975 NC_011757.1 5317474 5318022 R KEGG: mex:Mext_4512 hypothetical protein; hypothetical protein complement(5317474..5318022) Methylobacterium extorquens CM4 7114972 YP_002423669.1 CDS Mchl_4976 NC_011757.1 5318195 5318830 R PFAM: autoinducer synthesis protein; KEGG: mex:Mext_4513 autoinducer synthesis protein; autoinducer synthesis protein complement(5318195..5318830) Methylobacterium extorquens CM4 7114973 YP_002423670.1 CDS Mchl_4977 NC_011757.1 5319310 5320041 R PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: mex:Mext_4514 autoinducer-binding domain-containing protein; LuxR family transcriptional regulator complement(5319310..5320041) Methylobacterium extorquens CM4 7114974 YP_002423671.1 CDS Mchl_4978 NC_011757.1 5320604 5321563 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4518 LysR substrate-binding; LysR family transcriptional regulator complement(5320604..5321563) Methylobacterium extorquens CM4 7114976 YP_002423672.1 CDS Mchl_4979 NC_011757.1 5321660 5321911 D KEGG: mex:Mext_4519 hypothetical protein; hypothetical protein 5321660..5321911 Methylobacterium extorquens CM4 7114977 YP_002423673.1 CDS Mchl_4980 NC_011757.1 5322054 5325248 R PFAM: acriflavin resistance protein; KEGG: mex:Mext_4520 acriflavin resistance protein; acriflavin resistance protein complement(5322054..5325248) Methylobacterium extorquens CM4 7114978 YP_002423674.1 CDS Mchl_4981 NC_011757.1 5325251 5326357 R KEGG: mex:Mext_4521 hypothetical protein; hypothetical protein complement(5325251..5326357) Methylobacterium extorquens CM4 7114979 YP_002423675.1 CDS Mchl_4982 NC_011757.1 5326594 5327007 D KEGG: mex:Mext_4522 hypothetical protein; hypothetical protein 5326594..5327007 Methylobacterium extorquens CM4 7114980 YP_002423676.1 CDS Mchl_4983 NC_011757.1 5327108 5327629 D KEGG: mex:Mext_4523 hypothetical protein; hypothetical protein 5327108..5327629 Methylobacterium extorquens CM4 7114981 YP_002423677.1 CDS Mchl_4984 NC_011757.1 5327642 5329480 R PFAM: pyrrolo-quinoline quinone; KEGG: mex:Mext_4524 pyrrolo-quinoline quinone; pyrrolo-quinoline quinone complement(5327642..5329480) Methylobacterium extorquens CM4 7114982 YP_002423678.1 CDS Mchl_4985 NC_011757.1 5329671 5329943 D KEGG: mex:Mext_4525 hypothetical protein; hypothetical protein 5329671..5329943 Methylobacterium extorquens CM4 7114983 YP_002423679.1 CDS Mchl_4986 NC_011757.1 5329988 5331133 R PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: mex:Mext_4526 histidine kinase dimerisation/phosphoacceptor; signal transduction histidine kinase complement(5329988..5331133) Methylobacterium extorquens CM4 7114984 YP_002423680.1 CDS Mchl_4987 NC_011757.1 5331334 5331720 R KEGG: mex:Mext_4527 hypothetical protein; hypothetical protein complement(5331334..5331720) Methylobacterium extorquens CM4 7114985 YP_002423681.1 CDS Mchl_4988 NC_011757.1 5331862 5334213 R PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_4528 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase complement(5331862..5334213) Methylobacterium extorquens CM4 7114986 YP_002423682.1 CDS Mchl_4989 NC_011757.1 5334210 5334695 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_4529 2Fe-2S iron-sulfur cluster binding domain-containing protein; (2Fe-2S)-binding domain-containing protein complement(5334210..5334695) Methylobacterium extorquens CM4 7114987 YP_002423683.1 CDS Mchl_4990 NC_011757.1 5335112 5335456 R KEGG: mex:Mext_4530 hypothetical protein; hypothetical protein complement(5335112..5335456) Methylobacterium extorquens CM4 7114988 YP_002423684.1 CDS Mchl_4991 NC_011757.1 5335712 5335909 R KEGG: mex:Mext_4531 hypothetical protein; hypothetical protein complement(5335712..5335909) Methylobacterium extorquens CM4 7114989 YP_002423685.1 CDS Mchl_4992 NC_011757.1 5336256 5336501 D KEGG: mex:Mext_4532 hypothetical protein; hypothetical protein 5336256..5336501 Methylobacterium extorquens CM4 7114990 YP_002423686.1 CDS Mchl_4993 NC_011757.1 5336663 5339611 R KEGG: mex:Mext_4533 phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase complement(5336663..5339611) Methylobacterium extorquens CM4 7114991 YP_002423687.1 CDS Mchl_4994 NC_011757.1 5339738 5340304 D KEGG: mex:Mext_4534 hypothetical protein; hypothetical protein 5339738..5340304 Methylobacterium extorquens CM4 7114992 YP_002423688.1 CDS Mchl_4995 NC_011757.1 5340301 5341173 D KEGG: mex:Mext_4535 hypothetical protein; hypothetical protein 5340301..5341173 Methylobacterium extorquens CM4 7114993 YP_002423689.1 CDS Mchl_4996 NC_011757.1 5341191 5342855 D PFAM: saccharopine dehydrogenase; KEGG: mex:Mext_4536 saccharopine dehydrogenase; saccharopine dehydrogenase 5341191..5342855 Methylobacterium extorquens CM4 7114994 YP_002423690.1 CDS Mchl_4997 NC_011757.1 5342852 5343292 D PFAM: protein of unknown function DUF985; KEGG: mex:Mext_4537 hypothetical protein; hypothetical protein 5342852..5343292 Methylobacterium extorquens CM4 7114995 YP_002423691.1 CDS Mchl_4998 NC_011757.1 5343427 5344644 D PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: mex:Mext_4538 oxidoreductase domain-containing protein; oxidoreductase domain-containing protein 5343427..5344644 Methylobacterium extorquens CM4 7114996 YP_002423692.1 CDS Mchl_4999 NC_011757.1 5344743 5345186 D PFAM: protein of unknown function DUF606; KEGG: mex:Mext_4539 hypothetical protein; hypothetical protein 5344743..5345186 Methylobacterium extorquens CM4 7114997 YP_002423693.1 CDS Mchl_5000 NC_011757.1 5345519 5346406 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4540 LysR substrate-binding; LysR family transcriptional regulator 5345519..5346406 Methylobacterium extorquens CM4 7114998 YP_002423694.1 CDS Mchl_5001 NC_011757.1 5346412 5347434 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_4541 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein complement(5346412..5347434) Methylobacterium extorquens CM4 7114999 YP_002423695.1 CDS Mchl_5002 NC_011757.1 5347715 5351005 D KEGG: mex:Mext_4542 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase 5347715..5351005 Methylobacterium extorquens CM4 7115000 YP_002423696.1 CDS Mchl_5003 NC_011757.1 5351073 5351357 R PFAM: SH3 type 3 domain protein; KEGG: mex:Mext_4543 SH3 type 3 domain-containing protein; SH3 type 3 domain-containing protein complement(5351073..5351357) Methylobacterium extorquens CM4 7115001 YP_002423697.1 CDS Mchl_5004 NC_011757.1 5351369 5352142 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4544 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(5351369..5352142) Methylobacterium extorquens CM4 7115002 YP_002423698.1 CDS Mchl_5005 NC_011757.1 5352139 5353425 R FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-(acyl carrier protein) synthase II complement(5352139..5353425) Methylobacterium extorquens CM4 7115003 YP_002423699.1 CDS Mchl_5006 NC_011757.1 5353556 5354716 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II complement(5353556..5354716) Methylobacterium extorquens CM4 7115004 YP_002423700.1 CDS Mchl_5007 NC_011757.1 5354713 5355177 R PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: mex:Mext_4547 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ complement(5354713..5355177) Methylobacterium extorquens CM4 7115005 YP_002423701.1 CDS Mchl_5008 NC_011757.1 5355206 5355502 R Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein complement(5355206..5355502) Methylobacterium extorquens CM4 7115006 YP_002423702.1 CDS Mchl_5009 NC_011757.1 5355708 5356196 R KEGG: mex:Mext_4549 hypothetical protein; hypothetical protein complement(5355708..5356196) Methylobacterium extorquens CM4 7115007 YP_002423703.1 CDS Mchl_5010 NC_011757.1 5356381 5356680 D KEGG: mex:Mext_4550 GGDEF family protein; response regulator receiver protein 5356381..5356680 Methylobacterium extorquens CM4 7115008 YP_002423704.1 CDS Mchl_5011 NC_011757.1 5356757 5357836 D PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_4551 hypothetical protein; hypothetical protein 5356757..5357836 Methylobacterium extorquens CM4 7115009 YP_002423705.1 CDS Mchl_5012 NC_011757.1 5357841 5358710 R KEGG: mex:Mext_4552 hypothetical protein; hypothetical protein complement(5357841..5358710) Methylobacterium extorquens CM4 7115010 YP_002423706.1 CDS Mchl_5013 NC_011757.1 5358940 5359374 D KEGG: mex:Mext_4553 hypothetical protein; hypothetical protein 5358940..5359374 Methylobacterium extorquens CM4 7115011 YP_002423707.1 CDS Mchl_5014 NC_011757.1 5359379 5359792 D PFAM: cupin; KEGG: mex:Mext_4554 cupin 2 domain-containing protein; cupin 5359379..5359792 Methylobacterium extorquens CM4 7115012 YP_002423708.1 CDS Mchl_5015 NC_011757.1 5359838 5360134 D KEGG: mex:Mext_4555 hypothetical protein; hypothetical protein 5359838..5360134 Methylobacterium extorquens CM4 7115013 YP_002423709.1 CDS Mchl_5016 NC_011757.1 5360209 5360679 R PFAM: heat shock protein Hsp20; KEGG: mex:Mext_4556 heat shock protein HSP20; heat shock protein Hsp20 complement(5360209..5360679) Methylobacterium extorquens CM4 7115014 YP_002423710.1 CDS Mchl_5017 NC_011757.1 5360862 5361854 D PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_4557 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 5360862..5361854 Methylobacterium extorquens CM4 7115015 YP_002423711.1 CDS Mchl_5018 NC_011757.1 5362561 5364852 D PFAM: Hemolysin-type calcium-binding region; KEGG: mex:Mext_4558 hemolysin-type calcium-binding region; hemolysin-type calcium-binding region 5362561..5364852 Methylobacterium extorquens CM4 7115016 YP_002423712.1 CDS Mchl_5019 NC_011757.1 5365016 5365807 R TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: mex:Mext_4559 histidinol-phosphate phosphatase; histidinol-phosphate phosphatase complement(5365016..5365807) Methylobacterium extorquens CM4 7115017 YP_002423713.1 CDS Mchl_5020 NC_011757.1 5365863 5367902 R PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_4560 hypothetical protein; hypothetical protein complement(5365863..5367902) Methylobacterium extorquens CM4 7115018 YP_002423714.1 CDS Mchl_5021 NC_011757.1 5368132 5368914 R PFAM: LamB/YcsF family protein; KEGG: mex:Mext_4561 LamB/YcsF family protein; LamB/YcsF family protein complement(5368132..5368914) Methylobacterium extorquens CM4 7113624 YP_002423715.1 CDS Mchl_5022 NC_011757.1 5368925 5370223 R catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(5368925..5370223) Methylobacterium extorquens CM4 7113625 YP_002423716.1 CDS Mchl_5023 NC_011757.1 5370383 5370886 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_4563 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(5370383..5370886) Methylobacterium extorquens CM4 7113626 YP_002423717.1 CDS Mchl_5024 NC_011757.1 5371054 5371326 D KEGG: mex:Mext_4564 hypothetical protein; hypothetical protein 5371054..5371326 Methylobacterium extorquens CM4 7113627 YP_002423718.1 CDS Mchl_5025 NC_011757.1 5371418 5372545 D PFAM: Mrp protein; KEGG: mex:Mext_4565 MRP protein-like protein; Mrp protein 5371418..5372545 Methylobacterium extorquens CM4 7113628 YP_002423719.1 CDS Mchl_5026 NC_011757.1 5372542 5373198 D TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: mex:Mext_4566 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein A 5372542..5373198 Methylobacterium extorquens CM4 7113629 YP_002423720.1 CDS Mchl_5027 NC_011757.1 5373526 5376261 D TIGRFAM: DNA gyrase subunit alpha; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: mex:Mext_4567 DNA gyrase subunit alpha; DNA gyrase subunit alpha 5373526..5376261 Methylobacterium extorquens CM4 7113630 YP_002423721.1 CDS Mchl_5028 NC_011757.1 5376483 5377307 D KEGG: mex:Mext_4568 porin; porin 5376483..5377307 Methylobacterium extorquens CM4 7113631 YP_002423722.1 CDS coaD NC_011757.1 5377451 5377954 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 5377451..5377954 Methylobacterium extorquens CM4 7113632 YP_002423723.1 CDS Mchl_5030 NC_011757.1 5377996 5378538 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mex:Mext_4570 peptidyl-prolyl cis-trans isomerase cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 5377996..5378538 Methylobacterium extorquens CM4 7113633 YP_002423724.1 CDS Mchl_5031 NC_011757.1 5378598 5379044 D KEGG: mex:Mext_4571 hypothetical protein; hypothetical protein 5378598..5379044 Methylobacterium extorquens CM4 7113634 YP_002423725.1 CDS Mchl_5032 NC_011757.1 5379048 5379509 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mex:Mext_4572 peptidyl-prolyl cis-trans isomerase cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 5379048..5379509 Methylobacterium extorquens CM4 7113635 YP_002423726.1 CDS Mchl_5033 NC_011757.1 5379579 5379983 R PFAM: response regulator receiver; KEGG: mex:Mext_4573 response regulator receiver; response regulator receiver protein complement(5379579..5379983) Methylobacterium extorquens CM4 7113636 YP_002423727.1 CDS Mchl_5034 NC_011757.1 5380376 5381137 D KEGG: mex:Mext_4574 hypothetical protein; hypothetical protein 5380376..5381137 Methylobacterium extorquens CM4 7113637 YP_002423728.1 CDS Mchl_5035 NC_011757.1 5381151 5382554 D KEGG: mex:Mext_4575 hypothetical protein; hypothetical protein 5381151..5382554 Methylobacterium extorquens CM4 7113638 YP_002423729.1 CDS Mchl_5036 NC_011757.1 5382631 5385846 D KEGG: mex:Mext_4576 DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III subunit alpha; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 5382631..5385846 Methylobacterium extorquens CM4 7113639 YP_002423730.1 CDS Mchl_5037 NC_011757.1 5386000 5386212 D KEGG: mex:Mext_4577 hypothetical protein; hypothetical protein 5386000..5386212 Methylobacterium extorquens CM4 7113640 YP_002423731.1 CDS Mchl_5038 NC_011757.1 5386438 5387463 D PFAM: patatin; KEGG: mex:Mext_4578 patatin; patatin 5386438..5387463 Methylobacterium extorquens CM4 7113641 YP_002423732.1 CDS Mchl_5039 NC_011757.1 5387628 5388398 R PFAM: ion transporter; ion transport 2 domain protein; KEGG: mex:Mext_4579 ion transport 2 domain-containing protein; ion transport 2 domain-containing protein complement(5387628..5388398) Methylobacterium extorquens CM4 7113642 YP_002423733.1 CDS Mchl_5040 NC_011757.1 5388426 5388566 R hypothetical protein complement(5388426..5388566) Methylobacterium extorquens CM4 7113643 YP_002423734.1 CDS Mchl_5041 NC_011757.1 5388914 5389219 D KEGG: mex:Mext_4580 hypothetical protein; hypothetical protein 5388914..5389219 Methylobacterium extorquens CM4 7113644 YP_002423735.1 CDS Mchl_5042 NC_011757.1 5389283 5391001 D PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mex:Mext_4581 respiratory-chain NADH dehydrogenase domain-containing protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit 5389283..5391001 Methylobacterium extorquens CM4 7113645 YP_002423736.1 CDS Mchl_5043 NC_011757.1 5391054 5394023 D TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mex:Mext_4582 formate dehydrogenase, subunit alpha; formate dehydrogenase subunit alpha 5391054..5394023 Methylobacterium extorquens CM4 7113646 YP_002423737.1 CDS Mchl_5044 NC_011757.1 5394282 5395634 R PFAM: polysaccharide biosynthesis protein; KEGG: mex:Mext_4583 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(5394282..5395634) Methylobacterium extorquens CM4 7113647 YP_002423738.1 CDS Mchl_5045 NC_011757.1 5395649 5396647 R KEGG: mex:Mext_4584 hypothetical protein; hypothetical protein complement(5395649..5396647) Methylobacterium extorquens CM4 7113648 YP_002423739.1 CDS Mchl_5046 NC_011757.1 5396852 5397682 D PFAM: polysaccharide deacetylase; KEGG: mex:Mext_4585 polysaccharide deacetylase; polysaccharide deacetylase 5396852..5397682 Methylobacterium extorquens CM4 7113649 YP_002423740.1 CDS Mchl_5047 NC_011757.1 5397820 5398950 D PFAM: glycosyl transferase group 1; KEGG: mex:Mext_4586 glycosyl transferase group 1; group 1 glycosyl transferase 5397820..5398950 Methylobacterium extorquens CM4 7113650 YP_002423741.1 CDS Mchl_5048 NC_011757.1 5399381 5399899 D KEGG: mex:Mext_4587 hypothetical protein; hypothetical protein 5399381..5399899 Methylobacterium extorquens CM4 7113651 YP_002423742.1 CDS Mchl_5049 NC_011757.1 5400013 5402052 R KEGG: mex:Mext_4588 hypothetical protein; hypothetical protein complement(5400013..5402052) Methylobacterium extorquens CM4 7118840 YP_002423743.1 CDS Mchl_5050 NC_011757.1 5402049 5404172 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: mex:Mext_4589 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein complement(5402049..5404172) Methylobacterium extorquens CM4 7118924 YP_002423744.1 CDS Mchl_5051 NC_011757.1 5404351 5405721 R KEGG: mex:Mext_4590 hypothetical protein; hypothetical protein complement(5404351..5405721) Methylobacterium extorquens CM4 7118925 YP_002423745.1 CDS Mchl_5052 NC_011757.1 5406063 5407007 R KEGG: mex:Mext_4591 hypothetical protein; hypothetical protein complement(5406063..5407007) Methylobacterium extorquens CM4 7118926 YP_002423746.1 CDS Mchl_5053 NC_011757.1 5407283 5408026 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4592 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(5407283..5408026) Methylobacterium extorquens CM4 7118927 YP_002423747.1 CDS Mchl_5054 NC_011757.1 5408023 5409384 R PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_4593 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(5408023..5409384) Methylobacterium extorquens CM4 7118928 YP_002423748.1 CDS Mchl_5055 NC_011757.1 5409390 5409647 R KEGG: mex:Mext_4594 acyl carrier protein; acyl carrier protein complement(5409390..5409647) Methylobacterium extorquens CM4 7118929 YP_002423749.1 CDS Mchl_5056 NC_011757.1 5409698 5410615 R PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: mex:Mext_4595 alpha/beta hydrolase domain-containing protein; alpha/beta hydrolase fold-3 domain-containing protein complement(5409698..5410615) Methylobacterium extorquens CM4 7118930 YP_002423750.1 CDS Mchl_5057 NC_011757.1 5410633 5411565 R KEGG: mex:Mext_4596 hypothetical protein; hypothetical protein complement(5410633..5411565) Methylobacterium extorquens CM4 7118931 YP_002423751.1 CDS Mchl_5058 NC_011757.1 5411739 5412941 R PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_4597 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain-containing protein complement(5411739..5412941) Methylobacterium extorquens CM4 7118932 YP_002423752.1 CDS Mchl_5059 NC_011757.1 5413037 5413306 R KEGG: mex:Mext_4598 hypothetical protein; hypothetical protein complement(5413037..5413306) Methylobacterium extorquens CM4 7118933 YP_002423753.1 CDS Mchl_5060 NC_011757.1 5413440 5414012 R PFAM: flavin reductase domain protein FMN-binding; KEGG: mex:Mext_4599 flavin reductase domain-containing protein; flavin reductase domain-containing FMN-binding protein complement(5413440..5414012) Methylobacterium extorquens CM4 7118934 YP_002423754.1 CDS Mchl_5061 NC_011757.1 5414322 5416025 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: mex:Mext_4600 acetolactate synthase 2 catalytic subunit; thiamine pyrophosphate protein 5414322..5416025 Methylobacterium extorquens CM4 7118935 YP_002423755.1 CDS Mchl_5062 NC_011757.1 5416157 5416480 D KEGG: mex:Mext_4601 hypothetical protein; hypothetical protein 5416157..5416480 Methylobacterium extorquens CM4 7118936 YP_002423756.1 CDS Mchl_5063 NC_011757.1 5416525 5417391 R PFAM: aminotransferase class IV; KEGG: mex:Mext_4602 aminotransferase; aminotransferase complement(5416525..5417391) Methylobacterium extorquens CM4 7118937 YP_002423757.1 CDS Mchl_5064 NC_011757.1 5417418 5417867 R PFAM: protein of unknown function DUF861 cupin_3; KEGG: mex:Mext_4603 protein of unknown function DUF861 cupin_3; hypothetical protein complement(5417418..5417867) Methylobacterium extorquens CM4 7118938 YP_002423758.1 CDS Mchl_5065 NC_011757.1 5418346 5419638 D KEGG: mex:Mext_4604 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase 5418346..5419638 Methylobacterium extorquens CM4 7118939 YP_002423759.1 CDS Mchl_5066 NC_011757.1 5419672 5420667 D catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 5419672..5420667 Methylobacterium extorquens CM4 7118940 YP_002423760.1 CDS Mchl_5067 NC_011757.1 5420679 5422511 D activates fatty acids by binding to coenzyme A; may be involved in acyclic terpene utilization; long-chain-acyl-CoA synthetase 5420679..5422511 Methylobacterium extorquens CM4 7118941 YP_002423761.1 CDS Mchl_5068 NC_011757.1 5422650 5423969 R KEGG: mex:Mext_4607 hypothetical protein; hypothetical protein complement(5422650..5423969) Methylobacterium extorquens CM4 7118942 YP_002423762.1 CDS Mchl_5069 NC_011757.1 5424223 5426559 D KEGG: mex:Mext_4608 hypothetical protein; hypothetical protein 5424223..5426559 Methylobacterium extorquens CM4 7118943 YP_002423763.1 CDS Mchl_5070 NC_011757.1 5426556 5427479 D KEGG: mex:Mext_4609 hypothetical protein; hypothetical protein 5426556..5427479 Methylobacterium extorquens CM4 7118944 YP_002423764.1 CDS Mchl_5071 NC_011757.1 5428098 5429495 D KEGG: acr:Acry_1166 triple helix repeat-containing collagen; triple helix repeat-containing collagen 5428098..5429495 Methylobacterium extorquens CM4 7118945 YP_002423765.1 CDS Mchl_5072 NC_011757.1 5429688 5430359 D KEGG: acr:Acry_0615 glycosyl transferase, group 1; hypothetical protein 5429688..5430359 Methylobacterium extorquens CM4 7118946 YP_002423766.1 CDS Mchl_5073 NC_011757.1 5430627 5431736 D PFAM: glycosyl transferase family 2; KEGG: met:M446_3495 glycosyl transferase; family 2 glycosyl transferase 5430627..5431736 Methylobacterium extorquens CM4 7118947 YP_002423767.1 CDS Mchl_5075 NC_011757.1 5432416 5434482 R PFAM: radical SAM protein; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_4610 radical SAM domain-containing protein; radical SAM protein complement(5432416..5434482) Methylobacterium extorquens CM4 7118949 YP_002423768.1 CDS Mchl_5076 NC_011757.1 5434606 5434947 R TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: mex:Mext_4611 monovalent cation/proton antiporter, MnhG/PhaG subunit; monovalent cation/proton antiporter, MnhG/PhaG subunit complement(5434606..5434947) Methylobacterium extorquens CM4 7118950 YP_002423769.1 CDS Mchl_5077 NC_011757.1 5434944 5435228 R PFAM: multiple resistance and pH regulation protein F; KEGG: mex:Mext_4612 multiple resistance and pH regulation protein F; multiple resistance and pH regulation protein F complement(5434944..5435228) Methylobacterium extorquens CM4 7118951 YP_002423770.1 CDS Mchl_5078 NC_011757.1 5435225 5435713 R PFAM: cation antiporter; KEGG: mex:Mext_4613 cation antiporter; cation antiporter complement(5435225..5435713) Methylobacterium extorquens CM4 7118952 YP_002423771.1 CDS Mchl_5079 NC_011757.1 5435710 5437365 R subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D complement(5435710..5437365) Methylobacterium extorquens CM4 7118953 YP_002423772.1 CDS Mchl_5080 NC_011757.1 5437362 5437730 R subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C complement(5437362..5437730) Methylobacterium extorquens CM4 7118954 YP_002423773.1 CDS Mchl_5081 NC_011757.1 5437730 5440669 R subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; monovalent cation/H+ antiporter subunit A complement(5437730..5440669) Methylobacterium extorquens CM4 7118955 YP_002423774.1 CDS Mchl_5082 NC_011757.1 5441105 5441326 R KEGG: mex:Mext_4617 hypothetical protein; hypothetical protein complement(5441105..5441326) Methylobacterium extorquens CM4 7118956 YP_002423775.1 CDS Mchl_5083 NC_011757.1 5441788 5443125 D TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: mex:Mext_4618 nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase 5441788..5443125 Methylobacterium extorquens CM4 7118957 YP_002423776.1 CDS Mchl_5084 NC_011757.1 5443122 5444093 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_4619 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 5443122..5444093 Methylobacterium extorquens CM4 7118958 YP_002423777.1 CDS Mchl_5085 NC_011757.1 5444104 5445042 D PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: mex:Mext_4620 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 5444104..5445042 Methylobacterium extorquens CM4 7118959 YP_002423778.1 CDS Mchl_5086 NC_011757.1 5445035 5445910 D TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: mex:Mext_4621 WecB/TagA/CpsF family glycosyl transferase; WecB/TagA/CpsF family glycosyl transferase 5445035..5445910 Methylobacterium extorquens CM4 7118960 YP_002423779.1 CDS Mchl_5087 NC_011757.1 5445922 5447094 D PFAM: glycosyl transferase group 1; KEGG: mex:Mext_4622 glycosyl transferase group 1; group 1 glycosyl transferase 5445922..5447094 Methylobacterium extorquens CM4 7118961 YP_002423780.1 CDS Mchl_5088 NC_011757.1 5447259 5447426 R KEGG: mex:Mext_4623 hypothetical protein; hypothetical protein complement(5447259..5447426) Methylobacterium extorquens CM4 7118962 YP_002423781.1 CDS Mchl_5089 NC_011757.1 5447542 5450112 R PFAM: condensation domain protein; phosphopantetheine-binding; KEGG: mex:Mext_4624 aspartate racemase; aspartate racemase complement(5447542..5450112) Methylobacterium extorquens CM4 7118963 YP_002423782.1 CDS Mchl_5090 NC_011757.1 5450124 5453585 R TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: mex:Mext_4625 amino acid adenylation domain-containing protein; amino acid adenylation protein complement(5450124..5453585) Methylobacterium extorquens CM4 7118964 YP_002423783.1 CDS Mchl_5091 NC_011757.1 5453914 5455134 R KEGG: mex:Mext_4626 hypothetical protein; hypothetical protein complement(5453914..5455134) Methylobacterium extorquens CM4 7118965 YP_002423784.1 CDS Mchl_5092 NC_011757.1 5455274 5455804 R PFAM: phosphoglycerate mutase; KEGG: mex:Mext_4627 phosphoglycerate mutase; phosphohistidine phosphatase SixA complement(5455274..5455804) Methylobacterium extorquens CM4 7118966 YP_002423785.1 CDS Mchl_5093 NC_011757.1 5455801 5456781 R PFAM: aldo/keto reductase; KEGG: mex:Mext_4628 aldo/keto reductase; aldo/keto reductase complement(5455801..5456781) Methylobacterium extorquens CM4 7118967 YP_002423786.1 CDS Mchl_5094 NC_011757.1 5456840 5457691 R PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: mex:Mext_4631 ATPase central domain-containing protein; ATPase AAA complement(5456840..5457691) Methylobacterium extorquens CM4 7118968 YP_002423787.1 CDS Mchl_5095 NC_011757.1 5457787 5458440 R KEGG: mex:Mext_4632 hypothetical protein; hypothetical protein complement(5457787..5458440) Methylobacterium extorquens CM4 7118969 YP_002423788.1 CDS Mchl_5096 NC_011757.1 5458567 5459805 R KEGG: mex:Mext_4633 hypothetical protein; hypothetical protein complement(5458567..5459805) Methylobacterium extorquens CM4 7118970 YP_002423789.1 CDS Mchl_5097 NC_011757.1 5460108 5462000 D PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mex:Mext_4634 sodium/hydrogen exchanger; sodium/hydrogen exchanger 5460108..5462000 Methylobacterium extorquens CM4 7118971 YP_002423790.1 CDS murD NC_011757.1 5462035 5463402 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(5462035..5463402) Methylobacterium extorquens CM4 7118972 YP_002423791.1 CDS mraY NC_011757.1 5463427 5464509 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(5463427..5464509) Methylobacterium extorquens CM4 7118973 YP_002423792.1 CDS Mchl_5100 NC_011757.1 5464615 5466078 R TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mex:Mext_4637 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase complement(5464615..5466078) Methylobacterium extorquens CM4 7118974 YP_002423793.1 CDS Mchl_5101 NC_011757.1 5466075 5467553 R TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mex:Mext_4638 UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramyl-tripeptide synthetase complement(5466075..5467553) Methylobacterium extorquens CM4 7118975 YP_002423794.1 CDS Mchl_5102 NC_011757.1 5467613 5469490 R PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: mex:Mext_4639 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase complement(5467613..5469490) Methylobacterium extorquens CM4 7118976 YP_002423795.1 CDS Mchl_5103 NC_011757.1 5469498 5469929 R KEGG: mex:Mext_4640 hypothetical protein; hypothetical protein complement(5469498..5469929) Methylobacterium extorquens CM4 7118977 YP_002423796.1 CDS mraW NC_011757.1 5469926 5470987 R TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: mex:Mext_4641 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW complement(5469926..5470987) Methylobacterium extorquens CM4 7118978 YP_002423797.1 CDS Mchl_5105 NC_011757.1 5471890 5474334 R KEGG: mex:Mext_4642 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: NAD-dependent DNA ligase; DNA ligase, NAD-dependent complement(5471890..5474334) Methylobacterium extorquens CM4 7118980 YP_002423798.1 CDS Mchl_5106 NC_011757.1 5474452 5474772 D KEGG: mex:Mext_4643 hypothetical protein; hypothetical protein 5474452..5474772 Methylobacterium extorquens CM4 7118981 YP_002423799.1 CDS Mchl_5107 NC_011757.1 5474816 5475382 D PFAM: protein of unknown function DUF820; KEGG: mex:Mext_4644 hypothetical protein; hypothetical protein 5474816..5475382 Methylobacterium extorquens CM4 7118982 YP_002423800.1 CDS Mchl_5108 NC_011757.1 5475459 5476472 D PFAM: PfkB domain protein; KEGG: mex:Mext_4645 ribokinase-like domain-containing protein; PfkB domain-containing protein 5475459..5476472 Methylobacterium extorquens CM4 7118983 YP_002423801.1 CDS Mchl_5109 NC_011757.1 5476525 5476947 R PFAM: peptidylprolyl isomerase FKBP-type; KEGG: mex:Mext_4646 peptidylprolyl isomerase FKBP-type; FKBP-type peptidylprolyl isomerase complement(5476525..5476947) Methylobacterium extorquens CM4 7118984 YP_002423802.1 CDS Mchl_5110 NC_011757.1 5477015 5477482 R KEGG: mex:Mext_4647 hypothetical protein; hypothetical protein complement(5477015..5477482) Methylobacterium extorquens CM4 7118985 YP_002423803.1 CDS Mchl_5111 NC_011757.1 5477823 5479043 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mex:Mext_4648 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 5477823..5479043 Methylobacterium extorquens CM4 7118986 YP_002423804.1 CDS Mchl_5112 NC_011757.1 5479067 5479891 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 5479067..5479891 Methylobacterium extorquens CM4 7118987 YP_002423805.1 CDS Mchl_5113 NC_011757.1 5479923 5480615 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_4650 regulatory protein GntR HTH; GntR family transcriptional regulator complement(5479923..5480615) Methylobacterium extorquens CM4 7118988 YP_002423806.1 CDS Mchl_5114 NC_011757.1 5480880 5481923 D PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mex:Mext_4651 aromatic amino acid beta-eliminating lyase/threonine aldolase; aromatic amino acid beta-eliminating lyase/threonine aldolase 5480880..5481923 Methylobacterium extorquens CM4 7118989 YP_002423807.1 CDS Mchl_5115 NC_011757.1 5482054 5482599 R KEGG: mex:Mext_4652 hypothetical protein; hypothetical protein complement(5482054..5482599) Methylobacterium extorquens CM4 7118990 YP_002423808.1 CDS Mchl_5116 NC_011757.1 5482683 5483810 R PFAM: glutamate--cysteine ligase; KEGG: mex:Mext_4653 glutamate--cysteine ligase; glutamate--cysteine ligase complement(5482683..5483810) Methylobacterium extorquens CM4 7118991 YP_002423809.1 CDS Mchl_5117 NC_011757.1 5483880 5484251 R KEGG: mex:Mext_4654 hypothetical protein; hypothetical protein complement(5483880..5484251) Methylobacterium extorquens CM4 7118992 YP_002423810.1 CDS Mchl_5118 NC_011757.1 5484248 5485969 R PFAM: peptidase S10 serine carboxypeptidase; KEGG: mex:Mext_4655 peptidase S10 serine carboxypeptidase; peptidase S10 serine carboxypeptidase complement(5484248..5485969) Methylobacterium extorquens CM4 7118993 YP_002423811.1 CDS Mchl_5119 NC_011757.1 5485975 5486427 R PFAM: DNA polymerase III chi subunit HolC; KEGG: mex:Mext_4656 DNA polymerase III chi subunit HolC; DNA polymerase III chi subunit HolC complement(5485975..5486427) Methylobacterium extorquens CM4 7118994 YP_002423812.1 CDS Mchl_5120 NC_011757.1 5486589 5486882 D KEGG: mex:Mext_4657 hypothetical protein; hypothetical protein 5486589..5486882 Methylobacterium extorquens CM4 7118995 YP_002423813.1 CDS Mchl_5121 NC_011757.1 5486961 5488124 R PFAM: glutathionylspermidine synthase; KEGG: mex:Mext_4658 glutathionylspermidine synthase; glutathionylspermidine synthase complement(5486961..5488124) Methylobacterium extorquens CM4 7118996 YP_002423814.1 CDS Mchl_5122 NC_011757.1 5488124 5488756 R PFAM: protein of unknown function DUF1190; KEGG: mex:Mext_4659 integral membrane protein-like protein; hypothetical protein complement(5488124..5488756) Methylobacterium extorquens CM4 7118997 YP_002423815.1 CDS Mchl_5123 NC_011757.1 5488761 5489159 R PFAM: protein of unknown function DUF350; KEGG: mex:Mext_4660 hypothetical protein; hypothetical protein complement(5488761..5489159) Methylobacterium extorquens CM4 7118998 YP_002423816.1 CDS pyrG NC_011757.1 5489177 5490805 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(5489177..5490805) Methylobacterium extorquens CM4 7118999 YP_002423817.1 CDS Mchl_5125 NC_011757.1 5490998 5491465 R TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: mex:Mext_4662 preprotein translocase, SecG subunit; preprotein translocase subunit SecG complement(5490998..5491465) Methylobacterium extorquens CM4 7119000 YP_002423818.1 CDS Mchl_5126 NC_011757.1 5491768 5492049 D KEGG: mex:Mext_4663 hypothetical protein; hypothetical protein 5491768..5492049 Methylobacterium extorquens CM4 7119001 YP_002423819.1 CDS Mchl_5127 NC_011757.1 5492070 5492534 D KEGG: mex:Mext_4664 hypothetical protein; hypothetical protein 5492070..5492534 Methylobacterium extorquens CM4 7119002 YP_002423820.1 CDS Mchl_5128 NC_011757.1 5492559 5492828 R KEGG: mex:Mext_4665 hypothetical protein; hypothetical protein complement(5492559..5492828) Methylobacterium extorquens CM4 7119003 YP_002423821.1 CDS Mchl_5129 NC_011757.1 5493067 5493831 R PFAM: triosephosphate isomerase; KEGG: mex:Mext_4666 triose-phosphate isomerase; triose-phosphate isomerase complement(5493067..5493831) Methylobacterium extorquens CM4 7119004 YP_002423822.1 CDS Mchl_5130 NC_011757.1 5494065 5495969 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mex:Mext_4667 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 5494065..5495969 Methylobacterium extorquens CM4 7116168 YP_002423823.1 CDS Mchl_5131 NC_011757.1 5495978 5497498 D KEGG: mex:Mext_4668 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: anthranilate synthase component I domain protein; chorismate binding-like; anthranilate synthase component I 5495978..5497498 Methylobacterium extorquens CM4 7116169 YP_002423824.1 CDS Mchl_5132 NC_011757.1 5497560 5499254 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4669 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(5497560..5499254) Methylobacterium extorquens CM4 7116170 YP_002423825.1 CDS Mchl_5133 NC_011757.1 5499531 5500133 D TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: mex:Mext_4670 glutamine amidotransferase; glutamine amidotransferase 5499531..5500133 Methylobacterium extorquens CM4 7116171 YP_002423826.1 CDS trpD NC_011757.1 5500222 5501235 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 5500222..5501235 Methylobacterium extorquens CM4 7116172 YP_002423827.1 CDS Mchl_5135 NC_011757.1 5501269 5502126 D PFAM: indole-3-glycerol phosphate synthase; KEGG: mex:Mext_4672 indole-3-glycerol-phosphate synthase; indole-3-glycerol-phosphate synthase 5501269..5502126 Methylobacterium extorquens CM4 7116173 YP_002423828.1 CDS Mchl_5136 NC_011757.1 5502123 5502608 D TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: mex:Mext_4673 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C 5502123..5502608 Methylobacterium extorquens CM4 7116174 YP_002423829.1 CDS Mchl_5137 NC_011757.1 5502605 5503831 D TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_4674 molybdenum cofactor synthesis domain-containing protein; molybdenum cofactor synthesis protein 5502605..5503831 Methylobacterium extorquens CM4 7116175 YP_002423830.1 CDS Mchl_5138 NC_011757.1 5503925 5504161 D KEGG: mpo:Mpop_5215 RelE-like cytotoxic translational repressor of toxin-antitoxin stability system; RelE-like cytotoxic translational repressor of toxin-antitoxin stability system 5503925..5504161 Methylobacterium extorquens CM4 7116176 YP_002423831.1 CDS Mchl_5139 NC_011757.1 5504262 5504555 D SMART: helix-turn-helix domain protein; KEGG: mpo:Mpop_5216 XRE family transcriptional regulator; XRE family transcriptional regulator 5504262..5504555 Methylobacterium extorquens CM4 7116177 YP_002423832.1 CDS fabZ NC_011757.1 5504728 5505189 D in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 5504728..5505189 Methylobacterium extorquens CM4 7116178 YP_002423833.1 CDS Mchl_5141 NC_011757.1 5505195 5506001 D catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 5505195..5506001 Methylobacterium extorquens CM4 7116179 YP_002423834.1 CDS Mchl_5142 NC_011757.1 5506013 5506861 D PFAM: protein of unknown function DUF1009; KEGG: mex:Mext_4677 hypothetical protein; hypothetical protein 5506013..5506861 Methylobacterium extorquens CM4 7116180 YP_002423835.1 CDS lpxB NC_011757.1 5506858 5508018 D catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 5506858..5508018 Methylobacterium extorquens CM4 7116181 YP_002423836.1 CDS Mchl_5144 NC_011757.1 5508015 5508494 D PFAM: protein of unknown function DUF188; KEGG: mex:Mext_4679 hypothetical protein; hypothetical protein 5508015..5508494 Methylobacterium extorquens CM4 7116182 YP_002423837.1 CDS Mchl_5145 NC_011757.1 5508635 5509924 R KEGG: mex:Mext_4680 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: citrate synthase; citrate synthase I complement(5508635..5509924) Methylobacterium extorquens CM4 7116183 YP_002423838.1 CDS Mchl_5146 NC_011757.1 5510400 5511824 R TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: mex:Mext_4681 glutamyl-tRNA synthetase; glutamyl-tRNA synthetase complement(5510400..5511824) Methylobacterium extorquens CM4 7116184 YP_002423839.1 CDS Mchl_5147 NC_011757.1 5511992 5514250 D PFAM: ComEC/Rec2-related protein; KEGG: mex:Mext_4682 ComEC/Rec2-related protein; ComEC/Rec2-like protein 5511992..5514250 Methylobacterium extorquens CM4 7116185 YP_002423840.1 CDS Mchl_5148 NC_011757.1 5514244 5514966 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(5514244..5514966) Methylobacterium extorquens CM4 7116186 YP_002423841.1 CDS Mchl_5149 NC_011757.1 5515132 5515704 R PFAM: protein of unknown function DUF1236; KEGG: mex:Mext_4684 hypothetical protein; hypothetical protein complement(5515132..5515704) Methylobacterium extorquens CM4 7116187 YP_002423842.1 CDS Mchl_5150 NC_011757.1 5516371 5517726 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_4685 general substrate transporter; general substrate transporter 5516371..5517726 Methylobacterium extorquens CM4 7116188 YP_002423843.1 CDS Mchl_5151 NC_011757.1 5517841 5518665 R PFAM: protein of unknown function DUF849; KEGG: mex:Mext_4686 hypothetical protein; hypothetical protein complement(5517841..5518665) Methylobacterium extorquens CM4 7116189 YP_002423844.1 CDS Mchl_5152 NC_011757.1 5518679 5519758 R KEGG: mex:Mext_4687 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase complement(5518679..5519758) Methylobacterium extorquens CM4 7116190 YP_002423845.1 CDS Mchl_5153 NC_011757.1 5519898 5520359 R KEGG: mex:Mext_4688 hypothetical protein; hypothetical protein complement(5519898..5520359) Methylobacterium extorquens CM4 7116191 YP_002423846.1 CDS Mchl_5154 NC_011757.1 5520470 5521348 R PFAM: aldo/keto reductase; KEGG: mex:Mext_4689 aldo/keto reductase; aldo/keto reductase complement(5520470..5521348) Methylobacterium extorquens CM4 7116192 YP_002423847.1 CDS Mchl_5155 NC_011757.1 5521430 5522155 R KEGG: mex:Mext_4690 hypothetical protein; hypothetical protein complement(5521430..5522155) Methylobacterium extorquens CM4 7116193 YP_002423848.1 CDS Mchl_5156 NC_011757.1 5522351 5524348 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4691 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(5522351..5524348) Methylobacterium extorquens CM4 7116194 YP_002423849.1 CDS Mchl_5157 NC_011757.1 5524726 5526237 R KEGG: mex:Mext_4692 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do complement(5524726..5526237) Methylobacterium extorquens CM4 7116195 YP_002423850.1 CDS Mchl_5158 NC_011757.1 5526351 5527103 R KEGG: mex:Mext_4693 hypothetical protein; hypothetical protein complement(5526351..5527103) Methylobacterium extorquens CM4 7116196 YP_002423851.1 CDS Mchl_5159 NC_011757.1 5527100 5529820 R TIGRFAM: valyl-tRNA synthetase; KEGG: mex:Mext_4694 valyl-tRNA synthetase; valyl-tRNA synthetase complement(5527100..5529820) Methylobacterium extorquens CM4 7116197 YP_002423852.1 CDS Mchl_5160 NC_011757.1 5530144 5530740 R KEGG: mex:Mext_4695 hypothetical protein; hypothetical protein complement(5530144..5530740) Methylobacterium extorquens CM4 7116198 YP_002423853.1 CDS Mchl_5161 NC_011757.1 5530866 5532332 R TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: mex:Mext_4696 TolC family type I secretion outer membrane protein; TolC family type I secretion outer membrane protein complement(5530866..5532332) Methylobacterium extorquens CM4 7116199 YP_002423854.1 CDS Mchl_5162 NC_011757.1 5532900 5533550 R PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: mex:Mext_4697 protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(5532900..5533550) Methylobacterium extorquens CM4 7116200 YP_002423855.1 CDS Mchl_5164 NC_011757.1 5535292 5535594 D KEGG: mex:Mext_4699 hypothetical protein; hypothetical protein 5535292..5535594 Methylobacterium extorquens CM4 7116204 YP_002423856.1 CDS Mchl_5166 NC_011757.1 5536563 5536793 R KEGG: mex:Mext_4701 hypothetical protein; hypothetical protein complement(5536563..5536793) Methylobacterium extorquens CM4 7116206 YP_002423857.1 CDS Mchl_5167 NC_011757.1 5537392 5537646 R KEGG: mex:Mext_3583 hypothetical protein; hypothetical protein complement(5537392..5537646) Methylobacterium extorquens CM4 7116207 YP_002423858.1 CDS Mchl_5168 NC_011757.1 5537795 5538019 R KEGG: mex:Mext_4702 hypothetical protein; hypothetical protein complement(5537795..5538019) Methylobacterium extorquens CM4 7116208 YP_002423859.1 CDS Mchl_5169 NC_011757.1 5538551 5538925 R KEGG: mex:Mext_4703 hypothetical protein; hypothetical protein complement(5538551..5538925) Methylobacterium extorquens CM4 7116209 YP_002423860.1 CDS Mchl_5170 NC_011757.1 5539101 5539376 R KEGG: mex:Mext_4704 hypothetical protein; hypothetical protein complement(5539101..5539376) Methylobacterium extorquens CM4 7116210 YP_002423861.1 CDS Mchl_5171 NC_011757.1 5539404 5539652 R KEGG: mex:Mext_4705 hypothetical protein; hypothetical protein complement(5539404..5539652) Methylobacterium extorquens CM4 7116211 YP_002423862.1 CDS Mchl_5172 NC_011757.1 5539852 5540019 R KEGG: mex:Mext_4706 hypothetical protein; hypothetical protein complement(5539852..5540019) Methylobacterium extorquens CM4 7116212 YP_002423863.1 CDS Mchl_5173 NC_011757.1 5540088 5540984 R TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: hydroxyethylthiazole kinase; protein of unknown function UPF0031; KEGG: mex:Mext_4707 carbohydrate kinase, YjeF related protein; carbohydrate kinase complement(5540088..5540984) Methylobacterium extorquens CM4 7116213 YP_002423864.1 CDS Mchl_5174 NC_011757.1 5541213 5541503 D KEGG: mex:Mext_4708 hypothetical protein; hypothetical protein 5541213..5541503 Methylobacterium extorquens CM4 7116214 YP_002423865.1 CDS Mchl_5175 NC_011757.1 5541577 5541939 D KEGG: mex:Mext_4709 hypothetical protein; hypothetical protein 5541577..5541939 Methylobacterium extorquens CM4 7116215 YP_002423866.1 CDS Mchl_5176 NC_011757.1 5542118 5542369 D KEGG: mex:Mext_4710 hypothetical protein; hypothetical protein 5542118..5542369 Methylobacterium extorquens CM4 7116216 YP_002423867.1 CDS Mchl_5177 NC_011757.1 5542500 5542667 D KEGG: mpo:Mpop_5249 hypothetical protein; hypothetical protein 5542500..5542667 Methylobacterium extorquens CM4 7116217 YP_002423868.1 CDS Mchl_5178 NC_011757.1 5543241 5543447 D KEGG: mex:Mext_4711 hypothetical protein; hypothetical protein 5543241..5543447 Methylobacterium extorquens CM4 7116218 YP_002423869.1 CDS Mchl_5179 NC_011757.1 5543488 5543763 R KEGG: mex:Mext_4712 hypothetical protein; hypothetical protein complement(5543488..5543763) Methylobacterium extorquens CM4 7116219 YP_002423870.1 CDS Mchl_5180 NC_011757.1 5544183 5545223 D TIGRFAM: phosphate ABC transporter periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_4713 phosphate ABC transporter periplasmic phosphate-binding protein; phosphate ABC transporter periplasmic phosphate-binding protein 5544183..5545223 Methylobacterium extorquens CM4 7116220 YP_002423871.1 CDS Mchl_5181 NC_011757.1 5545338 5546312 D TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mex:Mext_4714 phosphate ABC transporter inner membrane subunit PstC; phosphate ABC transporter inner membrane subunit PstC 5545338..5546312 Methylobacterium extorquens CM4 7116221 YP_002423872.1 CDS Mchl_5182 NC_011757.1 5546357 5547250 D TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mpo:Mpop_5254 phosphate ABC transporter inner membrane subunit PstA; phosphate ABC transporter inner membrane subunit PstA 5546357..5547250 Methylobacterium extorquens CM4 7116222 YP_002423873.1 CDS Mchl_5183 NC_011757.1 5547292 5548107 D KEGG: mex:Mext_4716 phosphate ABC transporter ATPase subunit; TIGRFAM: phosphate ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA; phosphate ABC transporter ATPase 5547292..5548107 Methylobacterium extorquens CM4 7116223 YP_002423874.1 CDS Mchl_5184 NC_011757.1 5548239 5548952 D TIGRFAM: phosphate transporter regulatory protein PhoU; PFAM: PhoU family protein; KEGG: mex:Mext_4717 phosphate transporter regulatory protein PhoU; phosphate uptake regulator PhoU 5548239..5548952 Methylobacterium extorquens CM4 7116224 YP_002423875.1 CDS Mchl_5185 NC_011757.1 5549042 5549746 D TIGRFAM: phosphate regulon transcriptional regulator PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_4718 phosphate regulon transcriptional regulator PhoB; winged helix family two component transcriptional regulator PhoB 5549042..5549746 Methylobacterium extorquens CM4 7116225 YP_002423876.1 CDS Mchl_5186 NC_011757.1 5549975 5550514 R PFAM: GcrA cell cycle regulator; KEGG: mex:Mext_4719 GcrA cell cycle regulator; GcrA cell cycle regulator complement(5549975..5550514) Methylobacterium extorquens CM4 7116226 YP_002423877.1 CDS Mchl_5187 NC_011757.1 5551026 5551892 D PFAM: Domain of unknown function DUF1849; KEGG: mex:Mext_4720 hypothetical protein; hypothetical protein 5551026..5551892 Methylobacterium extorquens CM4 7116227 YP_002423878.1 CDS Mchl_5188 NC_011757.1 5551903 5553180 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(5551903..5553180) Methylobacterium extorquens CM4 7116228 YP_002423879.1 CDS Mchl_5189 NC_011757.1 5553237 5554058 D KEGG: mex:Mext_4722 precorrin-6x reductase; TIGRFAM: precorrin-6x reductase; PFAM: precorrin-6x reductase CbiJ/CobK; precorrin-6x reductase 5553237..5554058 Methylobacterium extorquens CM4 7116229 YP_002423880.1 CDS Mchl_5190 NC_011757.1 5554084 5555586 D TIGRFAM: cobyric acid synthase CobQ; PFAM: cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: mex:Mext_4723 cobyric acid synthase CobQ; cobyric acid synthase CobQ 5554084..5555586 Methylobacterium extorquens CM4 7116230 YP_002423881.1 CDS Mchl_5191 NC_011757.1 5555657 5556658 R TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: mex:Mext_4724 cobalamin biosynthesis protein CobD; cobalamin biosynthesis protein CobD complement(5555657..5556658) Methylobacterium extorquens CM4 7116231 YP_002423882.1 CDS Mchl_5192 NC_011757.1 5556664 5557680 D TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: mex:Mext_4725 L-threonine-O-3-phosphate decarboxylase; L-threonine-O-3-phosphate decarboxylase 5556664..5557680 Methylobacterium extorquens CM4 7116232 YP_002423883.1 CDS Mchl_5193 NC_011757.1 5557673 5558857 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4726 major facilitator transporter; major facilitator superfamily protein complement(5557673..5558857) Methylobacterium extorquens CM4 7116233 YP_002423884.1 CDS Mchl_5194 NC_011757.1 5559264 5559467 D KEGG: mex:Mext_4727 hypothetical protein; hypothetical protein 5559264..5559467 Methylobacterium extorquens CM4 7116234 YP_002423885.1 CDS Mchl_5195 NC_011757.1 5559669 5561078 D PFAM: malonyl-CoA decarboxylase; KEGG: mex:Mext_4728 malonyl-CoA decarboxylase; malonyl-CoA decarboxylase 5559669..5561078 Methylobacterium extorquens CM4 7116235 YP_002423886.1 CDS Mchl_5196 NC_011757.1 5561215 5561571 D PFAM: CsbD family protein; KEGG: mex:Mext_4729 CsbD family protein; CsbD family protein 5561215..5561571 Methylobacterium extorquens CM4 7116236 YP_002423887.1 CDS Mchl_5197 NC_011757.1 5561725 5562510 R TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_4730 3-hydroxybutyrate dehydrogenase; 3-hydroxybutyrate dehydrogenase complement(5561725..5562510) Methylobacterium extorquens CM4 7116237 YP_002423888.1 CDS Mchl_5198 NC_011757.1 5562715 5563677 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 5562715..5563677 Methylobacterium extorquens CM4 7116238 YP_002423889.1 CDS Mchl_5199 NC_011757.1 5563674 5564387 D PFAM: protein of unkown function DUF1796 papain-like cysteine peptidase; KEGG: mex:Mext_4732 hypothetical protein; hypothetical protein 5563674..5564387 Methylobacterium extorquens CM4 7116239 YP_002423890.1 CDS Mchl_5200 NC_011757.1 5564535 5565923 D KEGG: mex:Mext_4733 hypothetical protein; hypothetical protein 5564535..5565923 Methylobacterium extorquens CM4 7116240 YP_002423891.1 CDS rplS NC_011757.1 5566122 5566526 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 5566122..5566526 Methylobacterium extorquens CM4 7116241 YP_002423892.1 CDS Mchl_5202 NC_011757.1 5566582 5567040 D PFAM: DNA polymerase beta domain protein region; KEGG: mpo:Mpop_5274 hypothetical protein; DNA polymerase beta domain-containing protein 5566582..5567040 Methylobacterium extorquens CM4 7116242 YP_002423893.1 CDS Mchl_5203 NC_011757.1 5567316 5568512 R TIGRFAM: lytic murein transglycosylase; PFAM: peptidoglycan-binding protein; KEGG: mex:Mext_4736 lytic murein transglycosylase; lytic murein transglycosylase complement(5567316..5568512) Methylobacterium extorquens CM4 7116243 YP_002423894.1 CDS rpsD NC_011757.1 5568965 5569582 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 5568965..5569582 Methylobacterium extorquens CM4 7116244 YP_002423895.1 CDS Mchl_5205 NC_011757.1 5569711 5570763 R PFAM: 2-nitropropane dioxygenase NPD; KEGG: mex:Mext_4738 2-nitropropane dioxygenase NPD; 2-nitropropane dioxygenase NPD complement(5569711..5570763) Methylobacterium extorquens CM4 7116245 YP_002423896.1 CDS Mchl_5206 NC_011757.1 5570865 5571707 R KEGG: mex:Mext_4739 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase complement(5570865..5571707) Methylobacterium extorquens CM4 7116246 YP_002423897.1 CDS Mchl_5207 NC_011757.1 5571782 5572492 R KEGG: mex:Mext_4740 phosphatidylserine decarboxylase related protein; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase-like protein complement(5571782..5572492) Methylobacterium extorquens CM4 7116247 YP_002423898.1 CDS Mchl_5208 NC_011757.1 5572568 5574559 R PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: ATPase AAA; KEGG: mex:Mext_4741 ABC transporter related; ABC transporter complement(5572568..5574559) Methylobacterium extorquens CM4 7113654 YP_002423899.1 CDS Mchl_5209 NC_011757.1 5574618 5576153 R PFAM: peptidoglycan-binding LysM; KEGG: mex:Mext_4742 peptidoglycan-binding LysM; peptidoglycan-binding LysM complement(5574618..5576153) Methylobacterium extorquens CM4 7113817 YP_002423900.1 CDS Mchl_5210 NC_011757.1 5576370 5576972 D PFAM: conserved hypothetical protein; KEGG: mex:Mext_4743 hypothetical protein; hypothetical protein 5576370..5576972 Methylobacterium extorquens CM4 7113818 YP_002423901.1 CDS Mchl_5211 NC_011757.1 5576972 5577763 D KEGG: mex:Mext_4744 hypothetical protein; hypothetical protein 5576972..5577763 Methylobacterium extorquens CM4 7113819 YP_002423902.1 CDS cysS NC_011757.1 5577819 5579207 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(5577819..5579207) Methylobacterium extorquens CM4 7113820 YP_002423903.1 CDS Mchl_5213 NC_011757.1 5579536 5579859 D KEGG: mex:Mext_4746 hypothetical protein; hypothetical protein 5579536..5579859 Methylobacterium extorquens CM4 7113821 YP_002423904.1 CDS Mchl_5214 NC_011757.1 5579873 5580427 R PFAM: CreA family protein; KEGG: mex:Mext_4747 CreA family protein; CreA family protein complement(5579873..5580427) Methylobacterium extorquens CM4 7113822 YP_002423905.1 CDS Mchl_5215 NC_011757.1 5580501 5581601 D KEGG: mex:Mext_4748 hypothetical protein; hypothetical protein 5580501..5581601 Methylobacterium extorquens CM4 7113823 YP_002423906.1 CDS Mchl_5216 NC_011757.1 5581765 5583936 D PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_4749 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 5581765..5583936 Methylobacterium extorquens CM4 7113824 YP_002423907.1 CDS Mchl_5217 NC_011757.1 5584111 5585325 D PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4750 major facilitator transporter; major facilitator superfamily protein 5584111..5585325 Methylobacterium extorquens CM4 7113825 YP_002423908.1 CDS Mchl_5218 NC_011757.1 5585414 5585905 D PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: mex:Mext_4751 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 5585414..5585905 Methylobacterium extorquens CM4 7113826 YP_002423909.1 CDS Mchl_5219 NC_011757.1 5585902 5586681 D PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_4752 methyltransferase type 11; type 11 methyltransferase 5585902..5586681 Methylobacterium extorquens CM4 7113827 YP_002423910.1 CDS Mchl_5220 NC_011757.1 5586678 5588027 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(5586678..5588027) Methylobacterium extorquens CM4 7113828 YP_002423911.1 CDS Mchl_5221 NC_011757.1 5588084 5589163 R PFAM: secretion protein HlyD; KEGG: mex:Mext_4754 secretion protein HlyD; secretion protein HlyD complement(5588084..5589163) Methylobacterium extorquens CM4 7113829 YP_002423912.1 CDS Mchl_5222 NC_011757.1 5589160 5589354 R PFAM: protein of unknown function DUF1656; KEGG: mex:Mext_4755 hypothetical protein; hypothetical protein complement(5589160..5589354) Methylobacterium extorquens CM4 7113830 YP_002423913.1 CDS Mchl_5223 NC_011757.1 5589363 5591399 R PFAM: fusaric acid resistance protein conserved region; KEGG: mex:Mext_4756 fusaric acid resistance protein region; fusaric acid resistance protein conserved region complement(5589363..5591399) Methylobacterium extorquens CM4 7113831 YP_002423914.1 CDS Mchl_5224 NC_011757.1 5591396 5591830 R KEGG: mex:Mext_4757 hypothetical protein; hypothetical protein complement(5591396..5591830) Methylobacterium extorquens CM4 7113832 YP_002423915.1 CDS Mchl_5225 NC_011757.1 5591993 5592274 R KEGG: mex:Mext_4758 hypothetical protein; hypothetical protein complement(5591993..5592274) Methylobacterium extorquens CM4 7113833 YP_002423916.1 CDS Mchl_5226 NC_011757.1 5592634 5593269 D PFAM: glutathione S-transferase domain; KEGG: mex:Mext_4759 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein 5592634..5593269 Methylobacterium extorquens CM4 7113834 YP_002423917.1 CDS Mchl_5227 NC_011757.1 5594172 5595512 R TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; hypothetical protein; KEGG: mex:Mext_4760 beta-propeller repeat-containing to-pal system protein TolB; Tol-Pal system beta propeller repeat-containing protein TolB complement(5594172..5595512) Methylobacterium extorquens CM4 7113835 YP_002423918.1 CDS Mchl_5228 NC_011757.1 5595591 5597006 R TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA; KEGG: mex:Mext_4761 protein TolA; protein TolA complement(5595591..5597006) Methylobacterium extorquens CM4 7113836 YP_002423919.1 CDS Mchl_5229 NC_011757.1 5597021 5597470 R PFAM: biopolymertransporter ExbD/TolR; KEGG: mex:Mext_4762 biopolymer transporter ExbD/TolR; biopolymertransporter ExbD/TolR complement(5597021..5597470) Methylobacterium extorquens CM4 7113837 YP_002423920.1 CDS Mchl_5230 NC_011757.1 5597520 5598236 R TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: mex:Mext_4763 protein TolQ; protein TolQ complement(5597520..5598236) Methylobacterium extorquens CM4 7113838 YP_002423921.1 CDS Mchl_5231 NC_011757.1 5598676 5599926 D PFAM: chemotaxis sensory transducer; KEGG: mex:Mext_4764 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5598676..5599926 Methylobacterium extorquens CM4 7113839 YP_002423922.1 CDS Mchl_5232 NC_011757.1 5599913 5600344 R TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: mex:Mext_4765 tol-pal system-associated acyl-CoA thioesterase; tol-pal system-associated acyl-CoA thioesterase complement(5599913..5600344) Methylobacterium extorquens CM4 7113840 YP_002423923.1 CDS Mchl_5233 NC_011757.1 5600515 5601231 R KEGG: mex:Mext_4766 hypothetical protein; hypothetical protein complement(5600515..5601231) Methylobacterium extorquens CM4 7113841 YP_002423924.1 CDS Mchl_5234 NC_011757.1 5601537 5602478 R PFAM: metallophosphoesterase; KEGG: mex:Mext_4767 metallophosphoesterase; metallophosphoesterase complement(5601537..5602478) Methylobacterium extorquens CM4 7113842 YP_002423925.1 CDS ruvB NC_011757.1 5602471 5603541 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(5602471..5603541) Methylobacterium extorquens CM4 7113843 YP_002423926.1 CDS Mchl_5236 NC_011757.1 5603997 5605757 D PFAM: peptidoglycan-binding protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_4769 peptidoglycan binding domain-containing protein; ErfK/YbiS/YcfS/YnhG family protein 5603997..5605757 Methylobacterium extorquens CM4 7113844 YP_002423927.1 CDS Mchl_5237 NC_011757.1 5605904 5606431 D PFAM: ferritin; KEGG: mex:Mext_4770 ferritin Dps family protein; ferritin 5605904..5606431 Methylobacterium extorquens CM4 7113845 YP_002423928.1 CDS Mchl_5238 NC_011757.1 5606541 5609243 R PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: mex:Mext_4771 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(5606541..5609243) Methylobacterium extorquens CM4 7113846 YP_002423929.1 CDS Mchl_5239 NC_011757.1 5609588 5610238 D PFAM: class II aldolase/adducin family protein; KEGG: mex:Mext_4772 L-fuculose-phosphate aldolase; L-fuculose-phosphate aldolase 5609588..5610238 Methylobacterium extorquens CM4 7113847 YP_002423930.1 CDS Mchl_5240 NC_011757.1 5610831 5611358 D PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4773 ROSMUCR transcriptional regulator; MucR family transcriptional regulator 5610831..5611358 Methylobacterium extorquens CM4 7113848 YP_002423931.1 CDS Mchl_5241 NC_011757.1 5611578 5612360 D PFAM: restriction endonuclease; KEGG: mex:Mext_4774 restriction endonuclease; restriction endonuclease 5611578..5612360 Methylobacterium extorquens CM4 7113849 YP_002423932.1 CDS Mchl_5242 NC_011757.1 5612363 5613664 R PFAM: PepSY-associated TM helix domain protein; KEGG: mex:Mext_4775 PepSY-associated TM helix domain-containing protein; PepSY-associated TM helix domain-containing protein complement(5612363..5613664) Methylobacterium extorquens CM4 7113850 YP_002423933.1 CDS Mchl_5243 NC_011757.1 5614143 5616326 D KEGG: mex:Mext_4776 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein, 1A family 5614143..5616326 Methylobacterium extorquens CM4 7113851 YP_002423934.1 CDS Mchl_5244 NC_011757.1 5616621 5617688 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_4777 adenylyl cyclase class-3/4/guanylyl cyclase; adenylate/guanylate cyclase 5616621..5617688 Methylobacterium extorquens CM4 7113852 YP_002423935.1 CDS Mchl_5245 NC_011757.1 5617707 5618105 R KEGG: mex:Mext_4778 hypothetical protein; hypothetical protein complement(5617707..5618105) Methylobacterium extorquens CM4 7113853 YP_002423936.1 CDS Mchl_5246 NC_011757.1 5618408 5619307 D PFAM: cobyrinic acid ac-diamide synthase; KEGG: mex:Mext_4779 cobyrinic acid ac-diamide synthase; cobyrinic acid ac-diamide synthase 5618408..5619307 Methylobacterium extorquens CM4 7113854 YP_002423937.1 CDS Mchl_5247 NC_011757.1 5619297 5619821 D KEGG: mex:Mext_4780 hypothetical protein; hypothetical protein 5619297..5619821 Methylobacterium extorquens CM4 7113855 YP_002423938.1 CDS Mchl_5248 NC_011757.1 5619846 5620190 R KEGG: mex:Mext_4781 hypothetical protein; hypothetical protein complement(5619846..5620190) Methylobacterium extorquens CM4 7113856 YP_002423939.1 CDS Mchl_5249 NC_011757.1 5620326 5621966 R TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: mex:Mext_4782 chaperonin GroEL; chaperonin GroEL complement(5620326..5621966) Methylobacterium extorquens CM4 7113857 YP_002423940.1 CDS groES NC_011757.1 5622059 5622349 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(5622059..5622349) Methylobacterium extorquens CM4 7113858 YP_002423941.1 CDS Mchl_5251 NC_011757.1 5622564 5623568 D PFAM: Mg+2 transporter protein CorA; KEGG: mex:Mext_4784 Mg+2 transporter protein CorA; Mg+2 transporter protein CorA 5622564..5623568 Methylobacterium extorquens CM4 7113859 YP_002423942.1 CDS Mchl_5252 NC_011757.1 5623612 5624253 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: mex:Mext_4785 multiple antibiotic resistance (MarC)-related protein; multiple antibiotic resistance (MarC)-like protein complement(5623612..5624253) Methylobacterium extorquens CM4 7113860 YP_002423943.1 CDS Mchl_5253 NC_011757.1 5624430 5625890 D KEGG: mex:Mext_4786 O-antigen and teichoic acid-like export protein; O-antigen and teichoic acid-like export protein 5624430..5625890 Methylobacterium extorquens CM4 7113861 YP_002423944.1 CDS Mchl_5254 NC_011757.1 5626023 5627213 D PFAM: FAD linked oxidase; KEGG: mex:Mext_4787 FAD linked oxidase domain-containing protein; FAD linked oxidase 5626023..5627213 Methylobacterium extorquens CM4 7113862 YP_002423945.1 CDS Mchl_5255 NC_011757.1 5627227 5628867 R PFAM: phosphate transporter; KEGG: mex:Mext_4788 phosphate transporter; phosphate transporter complement(5627227..5628867) Methylobacterium extorquens CM4 7113863 YP_002423946.1 CDS Mchl_5256 NC_011757.1 5629194 5629403 D KEGG: mex:Mext_4789 hypothetical protein; hypothetical protein 5629194..5629403 Methylobacterium extorquens CM4 7113864 YP_002423947.1 CDS Mchl_5257 NC_011757.1 5629503 5629688 D KEGG: mex:Mext_4790 hypothetical protein; hypothetical protein 5629503..5629688 Methylobacterium extorquens CM4 7113865 YP_002423948.1 CDS Mchl_5258 NC_011757.1 5629697 5629999 D KEGG: mex:Mext_4791 hypothetical protein; hypothetical protein 5629697..5629999 Methylobacterium extorquens CM4 7113866 YP_002423949.1 CDS glpD NC_011757.1 5629996 5631513 D in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 5629996..5631513 Methylobacterium extorquens CM4 7113867 YP_002423950.1 CDS Mchl_5260 NC_011757.1 5631501 5632934 R KEGG: mex:Mext_4793 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase complement(5631501..5632934) Methylobacterium extorquens CM4 7113868 YP_002423951.1 CDS Mchl_5261 NC_011757.1 5633128 5635293 R MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase complement(5633128..5635293) Methylobacterium extorquens CM4 7113869 YP_002423952.1 CDS Mchl_5262 NC_011757.1 5635399 5635899 R KEGG: mex:Mext_4795 hypothetical protein; hypothetical protein complement(5635399..5635899) Methylobacterium extorquens CM4 7113870 YP_002423953.1 CDS Mchl_5263 NC_011757.1 5636015 5636944 D PFAM: protein of unknown function DUF817; KEGG: mex:Mext_4796 hypothetical protein; hypothetical protein 5636015..5636944 Methylobacterium extorquens CM4 7113871 YP_002423954.1 CDS Mchl_5264 NC_011757.1 5636937 5637152 R KEGG: mex:Mext_4797 hypothetical protein; hypothetical protein complement(5636937..5637152) Methylobacterium extorquens CM4 7113872 YP_002423955.1 CDS Mchl_5265 NC_011757.1 5637668 5638813 D PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mex:Mext_4798 2-alkenal reductase; 2-alkenal reductase 5637668..5638813 Methylobacterium extorquens CM4 7113873 YP_002423956.1 CDS Mchl_5266 NC_011757.1 5638883 5639578 D PFAM: heat shock protein DnaJ domain protein; KEGG: mex:Mext_4799 heat shock protein DnaJ domain-containing protein; heat shock protein DnaJ domain-containing protein 5638883..5639578 Methylobacterium extorquens CM4 7113874 YP_002423957.1 CDS Mchl_5267 NC_011757.1 5639808 5641292 R PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; sporulation domain protein; KEGG: mex:Mext_4800 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase complement(5639808..5641292) Methylobacterium extorquens CM4 7113875 YP_002423958.1 CDS Mchl_5268 NC_011757.1 5641726 5642121 D PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: mpo:Mpop_5344 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 5641726..5642121 Methylobacterium extorquens CM4 7113876 YP_002423959.1 CDS Mchl_5269 NC_011757.1 5642144 5644627 D KEGG: mex:Mext_4802 ATP-dependent Clp protease ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: ATPase AAA; Clp domain protein; ATPase AAA; ATPase AAA-2 domain protein; ATP-dependent Clp protease ATP-binding subunit clpA; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding subunit clpA 5642144..5644627 Methylobacterium extorquens CM4 7113877 YP_002423960.1 CDS Mchl_5270 NC_011757.1 5644763 5645035 D KEGG: mex:Mext_4803 hypothetical protein; hypothetical protein 5644763..5645035 Methylobacterium extorquens CM4 7113878 YP_002423961.1 CDS Mchl_5271 NC_011757.1 5645048 5646265 R catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase complement(5645048..5646265) Methylobacterium extorquens CM4 7113879 YP_002423962.1 CDS Mchl_5272 NC_011757.1 5646321 5647130 R TIGRFAM: photosynthetic complex assembly protein 2; KEGG: mex:Mext_4805 hypothetical protein; photosynthetic complex assembly protein 2 complement(5646321..5647130) Methylobacterium extorquens CM4 7113880 YP_002423963.1 CDS Mchl_5273 NC_011757.1 5647132 5648226 R oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis; magnesium-protoporphyrin IX monomethyl ester cyclase complement(5647132..5648226) Methylobacterium extorquens CM4 7113881 YP_002423964.1 CDS Mchl_5274 NC_011757.1 5648223 5648549 R KEGG: mex:Mext_4807 hypothetical protein; hypothetical protein complement(5648223..5648549) Methylobacterium extorquens CM4 7113882 YP_002423965.1 CDS Mchl_5275 NC_011757.1 5648549 5649019 R TIGRFAM: photosynthetic complex assembly protein; KEGG: mex:Mext_4808 hypothetical protein; photosynthetic complex assembly protein complement(5648549..5649019) Methylobacterium extorquens CM4 7113883 YP_002423966.1 CDS Mchl_5276 NC_011757.1 5649035 5649751 R KEGG: mex:Mext_4809 photosynthetic complex assembly protein; photosynthetic complex assembly protein complement(5649035..5649751) Methylobacterium extorquens CM4 7113884 YP_002423967.1 CDS Mchl_5277 NC_011757.1 5649763 5650536 R TIGRFAM: photosynthetic reaction center H subunit; PFAM: Photosynthetic reaction centre H subunit; KEGG: mex:Mext_4810 photosynthetic reaction center subunit H; photosynthetic reaction center H subunit complement(5649763..5650536) Methylobacterium extorquens CM4 7113885 YP_002423968.1 CDS Mchl_5278 NC_011757.1 5650550 5651995 R PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: mex:Mext_4811 PucC protein; PUCC protein complement(5650550..5651995) Methylobacterium extorquens CM4 7113886 YP_002423969.1 CDS Mchl_5279 NC_011757.1 5651992 5652723 R catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine; Mg-protoporphyrin IX methyl transferase complement(5651992..5652723) Methylobacterium extorquens CM4 7113887 YP_002423970.1 CDS chlL NC_011757.1 5652723 5653616 R light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production; protochlorophyllide reductase iron-sulfur ATP-binding protein complement(5652723..5653616) Methylobacterium extorquens CM4 7113888 YP_002423971.1 CDS bchH NC_011757.1 5653613 5657329 R involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; the enzyme from Rhodobacter capsulatus contains an Fe-S cluster; part of a complex with BchI, BchD, and BchH; magnesium chelatase subunit H complement(5653613..5657329) Methylobacterium extorquens CM4 7113889 YP_002423972.1 CDS Mchl_5282 NC_011757.1 5657304 5658899 R light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit B complement(5657304..5658899) Methylobacterium extorquens CM4 7113890 YP_002423973.1 CDS Mchl_5283 NC_011757.1 5658905 5660173 R light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit N complement(5658905..5660173) Methylobacterium extorquens CM4 7113891 YP_002423974.1 CDS Mchl_5284 NC_011757.1 5660170 5660673 R PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: mex:Mext_4817 2-vinyl bacteriochlorophyllide hydratase; 2-vinyl bacteriochlorophyllide hydratase complement(5660170..5660673) Methylobacterium extorquens CM4 7113892 YP_002423975.1 CDS Mchl_5285 NC_011757.1 5660930 5661817 D KEGG: mex:Mext_4818 cobalamin B12-binding; cobalamin B12-binding 5660930..5661817 Methylobacterium extorquens CM4 7113893 YP_002423976.1 CDS Mchl_5286 NC_011757.1 5661863 5663305 D KEGG: mex:Mext_4819 transcriptional regulator PpsR; TIGRFAM: transcriptional regulator PpsR; PFAM: helix-turn-helix Fis-type; PAS fold domain protein; SMART: PAS domain containing protein; Fis family transcriptional regulator 5661863..5663305 Methylobacterium extorquens CM4 7113894 YP_002423977.1 CDS Mchl_5287 NC_011757.1 5663428 5664315 D TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: mex:Mext_4820 bacteriochlorophyll/chlorophyll a synthase; bacteriochlorophyll/chlorophyll a synthase 5663428..5664315 Methylobacterium extorquens CM4 7113895 YP_002423978.1 CDS Mchl_5288 NC_011757.1 5664312 5665688 D PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: mex:Mext_4821 PucC protein; PUCC protein 5664312..5665688 Methylobacterium extorquens CM4 7113896 YP_002423979.1 CDS Mchl_5289 NC_011757.1 5665693 5666886 D TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mex:Mext_4822 geranylgeranyl reductase; geranylgeranyl reductase 5665693..5666886 Methylobacterium extorquens CM4 7118146 YP_002423980.1 CDS Mchl_5290 NC_011757.1 5666883 5667380 D PFAM: TspO/MBR family protein; KEGG: mex:Mext_4823 TspO/MBR family protein; TspO and MBR-like protein 5666883..5667380 Methylobacterium extorquens CM4 7118391 YP_002423981.1 CDS Mchl_5291 NC_011757.1 5667384 5667749 D KEGG: mex:Mext_4824 hypothetical protein; hypothetical protein 5667384..5667749 Methylobacterium extorquens CM4 7118392 YP_002423982.1 CDS Mchl_5292 NC_011757.1 5667793 5669388 D PFAM: cytochrome C class I; KEGG: mex:Mext_4825 gluconate 2-dehydrogenase (acceptor); gluconate 2-dehydrogenase (acceptor) 5667793..5669388 Methylobacterium extorquens CM4 7118393 YP_002423983.1 CDS Mchl_5293 NC_011757.1 5669563 5670555 D similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 5669563..5670555 Methylobacterium extorquens CM4 7118394 YP_002423984.1 CDS Mchl_5294 NC_011757.1 5670552 5671283 D TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: mex:Mext_4827 6-phosphogluconolactonase; 6-phosphogluconolactonase 5670552..5671283 Methylobacterium extorquens CM4 7118395 YP_002423985.1 CDS Mchl_5295 NC_011757.1 5671396 5671962 D KEGG: mex:Mext_4828 hypothetical protein; hypothetical protein 5671396..5671962 Methylobacterium extorquens CM4 7118396 YP_002423986.1 CDS Mchl_5296 NC_011757.1 5672075 5673847 R responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease; Cgt; ChvA; NdvA; cyclic beta-1,2-glucan ABC transporter complement(5672075..5673847) Methylobacterium extorquens CM4 7118397 YP_002423987.1 CDS Mchl_5297 NC_011757.1 5674118 5674891 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: mex:Mext_4830 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 5674118..5674891 Methylobacterium extorquens CM4 7118398 YP_002423988.1 CDS Mchl_5298 NC_011757.1 5674906 5675739 D PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_4831 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 5674906..5675739 Methylobacterium extorquens CM4 7118399 YP_002423989.1 CDS Mchl_5299 NC_011757.1 5675761 5676267 R PFAM: SCP-like extracellular; KEGG: mpo:Mpop_5377 SCP-like extracellular; SCP-like extracellular complement(5675761..5676267) Methylobacterium extorquens CM4 7118400 YP_002423990.1 CDS Mchl_5300 NC_011757.1 5676393 5679122 R PFAM: MscS Mechanosensitive ion channel; KEGG: mex:Mext_4833 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS complement(5676393..5679122) Methylobacterium extorquens CM4 7118401 YP_002423991.1 CDS Mchl_5301 NC_011757.1 5679834 5680382 D PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mex:Mext_4834 HNH endonuclease; HNH endonuclease 5679834..5680382 Methylobacterium extorquens CM4 7118402 YP_002423992.1 CDS Mchl_5302 NC_011757.1 5680390 5680641 R KEGG: mpo:Mpop_5380 hypothetical protein; hypothetical protein complement(5680390..5680641) Methylobacterium extorquens CM4 7118403 YP_002423993.1 CDS Mchl_5303 NC_011757.1 5680668 5681567 R PFAM: porin; KEGG: mpo:Mpop_5381 outer membrane insertion C-terminal signal; porin complement(5680668..5681567) Methylobacterium extorquens CM4 7118404 YP_002423994.1 CDS Mchl_5304 NC_011757.1 5681806 5682663 R PFAM: porin opacity type; porin; KEGG: mex:Mext_4836 porin opacity type; porin opacity type complement(5681806..5682663) Methylobacterium extorquens CM4 7118405 YP_002423995.1 CDS Mchl_5305 NC_011757.1 5682844 5683707 R KEGG: mex:Mext_4837 hypothetical protein; hypothetical protein complement(5682844..5683707) Methylobacterium extorquens CM4 7118406 YP_002423996.1 CDS glmM NC_011757.1 5683971 5685311 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(5683971..5685311) Methylobacterium extorquens CM4 7118407 YP_002423997.1 CDS Mchl_5307 NC_011757.1 5685498 5686247 R PFAM: protein of unknown function DUF81; KEGG: mex:Mext_4839 hypothetical protein; hypothetical protein complement(5685498..5686247) Methylobacterium extorquens CM4 7118408 YP_002423998.1 CDS Mchl_5308 NC_011757.1 5686363 5688291 R KEGG: mex:Mext_4840 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; ATP-dependent metalloprotease FtsH complement(5686363..5688291) Methylobacterium extorquens CM4 7118409 YP_002423999.1 CDS Mchl_5309 NC_011757.1 5688429 5689472 R TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: mex:Mext_4841 tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase complement(5688429..5689472) Methylobacterium extorquens CM4 7118410 YP_002424000.1 CDS Mchl_5310 NC_011757.1 5689469 5690494 R TIGRFAM: tol-pal system protein YbgF; KEGG: mex:Mext_4842 tol-pal system protein YbgF; tol-pal system protein YbgF complement(5689469..5690494) Methylobacterium extorquens CM4 7118411 YP_002424001.1 CDS Mchl_5311 NC_011757.1 5690668 5691180 R TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_4843 peptidoglycan-associated lipoprotein; peptidoglycan-associated lipoprotein complement(5690668..5691180) Methylobacterium extorquens CM4 7118412 YP_002424002.1 CDS Mchl_5312 NC_011757.1 5691564 5691917 R KEGG: mex:Mext_4844 hypothetical protein; hypothetical protein complement(5691564..5691917) Methylobacterium extorquens CM4 7118413 YP_002424003.1 CDS Mchl_5313 NC_011757.1 5692020 5692418 D PFAM: response regulator receiver; KEGG: mex:Mext_4845 response regulator receiver; response regulator receiver protein 5692020..5692418 Methylobacterium extorquens CM4 7118414 YP_002424004.1 CDS Mchl_5314 NC_011757.1 5692514 5693410 R KEGG: mex:Mext_4846 hypothetical protein; hypothetical protein complement(5692514..5693410) Methylobacterium extorquens CM4 7118415 YP_002424005.1 CDS Mchl_5315 NC_011757.1 5693584 5694645 D PFAM: GSCFA domain protein; KEGG: mex:Mext_4847 GSCFA domain-containing protein; GSCFA domain-containing protein 5693584..5694645 Methylobacterium extorquens CM4 7118416 YP_002424006.1 CDS Mchl_5316 NC_011757.1 5694793 5695722 R KEGG: mex:Mext_4848 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase; porphobilinogen deaminase complement(5694793..5695722) Methylobacterium extorquens CM4 7118417 YP_002424007.1 CDS Mchl_5317 NC_011757.1 5696052 5697116 R PFAM: integrase family protein; KEGG: mex:Mext_4388 integrase family protein; integrase family protein complement(5696052..5697116) Methylobacterium extorquens CM4 7118419 YP_002424008.1 CDS Mchl_5319 NC_011757.1 5700531 5702783 R KEGG: met:M446_5543 RecD/TraA family helicase; TIGRFAM: helicase, RecD/TraA family; SMART: DNA-binding protein; ATPase AAA; RecD/TraA family helicase complement(5700531..5702783) Methylobacterium extorquens CM4 7118421 YP_002424009.1 CDS Mchl_5320 NC_011757.1 5703035 5703244 R hypothetical protein complement(5703035..5703244) Methylobacterium extorquens CM4 7118422 YP_002424010.1 CDS Mchl_5321 NC_011757.1 5703232 5703528 R hypothetical protein complement(5703232..5703528) Methylobacterium extorquens CM4 7118423 YP_002424011.1 CDS Mchl_5322 NC_011757.1 5703745 5703906 D hypothetical protein 5703745..5703906 Methylobacterium extorquens CM4 7118424 YP_002424012.1 CDS Mchl_5323 NC_011757.1 5703944 5704627 R hypothetical protein complement(5703944..5704627) Methylobacterium extorquens CM4 7118425 YP_002424013.1 CDS Mchl_5324 NC_011757.1 5704786 5704977 R hypothetical protein complement(5704786..5704977) Methylobacterium extorquens CM4 7118426 YP_002424014.1 CDS Mchl_5325 NC_011757.1 5705085 5705219 D hypothetical protein 5705085..5705219 Methylobacterium extorquens CM4 7118427 YP_002424015.1 CDS Mchl_5326 NC_011757.1 5705163 5705291 R hypothetical protein complement(5705163..5705291) Methylobacterium extorquens CM4 7118428 YP_002424016.1 CDS Mchl_5327 NC_011757.1 5705288 5705770 R KEGG: mrd:Mrad2831_2006 heat shock protein DnaJ domain-containing protein; heat shock protein DnaJ domain-containing protein complement(5705288..5705770) Methylobacterium extorquens CM4 7118429 YP_002424017.1 CDS Mchl_5328 NC_011757.1 5705767 5705994 R KEGG: bvi:Bcep1808_6235 hypothetical protein; hypothetical protein complement(5705767..5705994) Methylobacterium extorquens CM4 7118430 YP_002424018.1 CDS Mchl_5329 NC_011757.1 5705994 5707184 R KEGG: rsq:Rsph17025_4201 hypothetical protein; hypothetical protein complement(5705994..5707184) Methylobacterium extorquens CM4 7119005 YP_002424019.1 CDS Mchl_5330 NC_011757.1 5708243 5708908 D PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: rpb:RPB_3655 SAM binding protein; type 12 methyltransferase 5708243..5708908 Methylobacterium extorquens CM4 7114365 YP_002424020.1 CDS Mchl_5331 NC_011757.1 5709063 5709461 R KEGG: mrd:Mrad2831_5275 hypothetical protein; hypothetical protein complement(5709063..5709461) Methylobacterium extorquens CM4 7116248 YP_002424021.1 CDS Mchl_5332 NC_011757.1 5710008 5711189 D KEGG: ava:Ava_1781 hypothetical protein; hypothetical protein 5710008..5711189 Methylobacterium extorquens CM4 7116249 YP_002424022.1 CDS Mchl_5334 NC_011757.1 5713665 5714729 D PFAM: integrase family protein; KEGG: mex:Mext_4388 integrase family protein; integrase family protein 5713665..5714729 Methylobacterium extorquens CM4 7116251 YP_002424023.1 CDS Mchl_5335 NC_011757.1 5715442 5716545 D KEGG: nha:Nham_3713 hypothetical protein; hypothetical protein 5715442..5716545 Methylobacterium extorquens CM4 7116252 YP_002424024.1 CDS Mchl_5336 NC_011757.1 5717226 5718842 R KEGG: mex:Mext_4849 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(5717226..5718842) Methylobacterium extorquens CM4 7116253 YP_002424025.1 CDS Mchl_5337 NC_011757.1 5719016 5719909 R PFAM: polysaccharide deacetylase; KEGG: mex:Mext_4850 polysaccharide deacetylase; polysaccharide deacetylase complement(5719016..5719909) Methylobacterium extorquens CM4 7116254 YP_002424026.1 CDS Mchl_5338 NC_011757.1 5719951 5722422 R PFAM: inner-membrane translocator; ABC transporter related; SMART: ATPase AAA; KEGG: mex:Mext_4851 ABC transporter; ABC transporter complement(5719951..5722422) Methylobacterium extorquens CM4 7116255 YP_002424027.1 CDS Mchl_5339 NC_011757.1 5722425 5723294 R PFAM: inner-membrane translocator; KEGG: mex:Mext_4852 inner-membrane translocator; inner-membrane translocator complement(5722425..5723294) Methylobacterium extorquens CM4 7116256 YP_002424028.1 CDS Mchl_5340 NC_011757.1 5723344 5724534 R PFAM: extracellular ligand-binding receptor; KEGG: mex:Mext_4853 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(5723344..5724534) Methylobacterium extorquens CM4 7116257 YP_002424029.1 CDS Mchl_5341 NC_011757.1 5724745 5725155 D KEGG: mex:Mext_4854 hypothetical protein; hypothetical protein 5724745..5725155 Methylobacterium extorquens CM4 7116258 YP_002424030.1 CDS Mchl_5342 NC_011757.1 5725160 5725861 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_4855 GntR domain-containing protein; GntR family transcriptional regulator complement(5725160..5725861) Methylobacterium extorquens CM4 7116259 YP_002424031.1 CDS Mchl_5343 NC_011757.1 5726294 5726749 R KEGG: mex:Mext_4857 hypothetical protein; hypothetical protein complement(5726294..5726749) Methylobacterium extorquens CM4 7116260 YP_002424032.1 CDS Mchl_5344 NC_011757.1 5727705 5727974 R hypothetical protein complement(5727705..5727974) Methylobacterium extorquens CM4 7116261 YP_002424033.1 CDS Mchl_5345 NC_011757.1 5728154 5729170 R PFAM: helix-turn-helix domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: mex:Mext_4859 PAS domain-containing protein; PAS fold-3 domain-containing protein complement(5728154..5729170) Methylobacterium extorquens CM4 7116262 YP_002424034.1 CDS Mchl_5346 NC_011757.1 5729567 5730901 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4861 major facilitator transporter; major facilitator superfamily protein complement(5729567..5730901) Methylobacterium extorquens CM4 7116263 YP_002424035.1 CDS Mchl_5347 NC_011757.1 5731183 5731686 D PFAM: protein of unknown function DUF892; KEGG: mex:Mext_4862 hypothetical protein; hypothetical protein 5731183..5731686 Methylobacterium extorquens CM4 7116264 YP_002424036.1 CDS Mchl_5348 NC_011757.1 5731858 5733351 D PFAM: protein of unknown function UPF0061; KEGG: mex:Mext_4863 hypothetical protein; hypothetical protein 5731858..5733351 Methylobacterium extorquens CM4 7116265 YP_002424037.1 CDS Mchl_5349 NC_011757.1 5734017 5735792 D TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: mex:Mext_4864 acetolactate synthase large subunit; acetolactate synthase, large subunit, biosynthetic type 5734017..5735792 Methylobacterium extorquens CM4 7116266 YP_002424038.1 CDS Mchl_5350 NC_011757.1 5735853 5736764 R KEGG: mex:Mext_4865 hypothetical protein; hypothetical protein complement(5735853..5736764) Methylobacterium extorquens CM4 7116267 YP_002424039.1 CDS Mchl_5351 NC_011757.1 5736871 5737413 D TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; acetolactate synthase small subunit; KEGG: mex:Mext_4866 acetolactate synthase, small subunit; acetolactate synthase, small subunit 5736871..5737413 Methylobacterium extorquens CM4 7116268 YP_002424040.1 CDS Mchl_5352 NC_011757.1 5737476 5738120 D PFAM: glutathione S-transferase domain; KEGG: mex:Mext_4867 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein 5737476..5738120 Methylobacterium extorquens CM4 7116269 YP_002424041.1 CDS Mchl_5353 NC_011757.1 5738344 5740113 D KEGG: mex:Mext_4868 asparagine synthase amidotransferase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase family amidotransferase; PFAM: glutamine amidotransferase class-II; asparagine synthase; asparagine synthase family amidotransferase 5738344..5740113 Methylobacterium extorquens CM4 7116270 YP_002424042.1 CDS Mchl_5354 NC_011757.1 5740269 5741108 D PFAM: glutamine amidotransferase class-II; KEGG: mex:Mext_4869 glutamine amidotransferase class-II; class II glutamine amidotransferase 5740269..5741108 Methylobacterium extorquens CM4 7116271 YP_002424043.1 CDS Mchl_5355 NC_011757.1 5741256 5742002 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_4870 sigma-70 family RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit complement(5741256..5742002) Methylobacterium extorquens CM4 7116272 YP_002424044.1 CDS Mchl_5356 NC_011757.1 5742290 5744251 D KEGG: mex:Mext_4871 hypothetical protein; hypothetical protein 5742290..5744251 Methylobacterium extorquens CM4 7116273 YP_002424045.1 CDS Mchl_5357 NC_011757.1 5744406 5744672 D KEGG: mex:Mext_4872 hypothetical protein; hypothetical protein 5744406..5744672 Methylobacterium extorquens CM4 7116274 YP_002424046.1 CDS Mchl_5358 NC_011757.1 5744893 5745939 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: mex:Mext_4873 histidine kinase dimerisation/phosphoacceptor; signal transduction histidine kinase complement(5744893..5745939) Methylobacterium extorquens CM4 7116275 YP_002424047.1 CDS Mchl_5359 NC_011757.1 5745936 5746382 R PFAM: response regulator receiver; KEGG: mex:Mext_4874 response regulator receiver; response regulator receiver protein complement(5745936..5746382) Methylobacterium extorquens CM4 7116276 YP_002424048.1 CDS Mchl_5360 NC_011757.1 5746385 5748283 R KEGG: mex:Mext_4875 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; MHYT domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase complement(5746385..5748283) Methylobacterium extorquens CM4 7116277 YP_002424049.1 CDS Mchl_5361 NC_011757.1 5748610 5749509 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_4876 cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 5748610..5749509 Methylobacterium extorquens CM4 7116278 YP_002424050.1 CDS Mchl_5362 NC_011757.1 5749559 5751490 R KEGG: mex:Mext_4877 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; response regulator receiver; GAF domain protein; Sigma-70 region 4 type 2; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; LuxR family transcriptional regulator complement(5749559..5751490) Methylobacterium extorquens CM4 7116279 YP_002424051.1 CDS Mchl_5363 NC_011757.1 5752410 5752847 D hypothetical protein 5752410..5752847 Methylobacterium extorquens CM4 7116280 YP_002424052.1 CDS Mchl_5366 NC_011757.1 5755109 5755282 D KEGG: met:M446_0726 hypothetical protein; hypothetical protein 5755109..5755282 Methylobacterium extorquens CM4 7116283 YP_002424053.1 CDS Mchl_5367 NC_011757.1 5756975 5757145 R hypothetical protein complement(5756975..5757145) Methylobacterium extorquens CM4 7116284 YP_002424054.1 CDS Mchl_5368 NC_011757.1 5757698 5759005 R KEGG: mpo:Mpop_5454 hypothetical protein; hypothetical protein complement(5757698..5759005) Methylobacterium extorquens CM4 7116285 YP_002424055.1 CDS Mchl_5369 NC_011757.1 5759059 5759661 R KEGG: vei:Veis_3747 hypothetical protein; hypothetical protein complement(5759059..5759661) Methylobacterium extorquens CM4 7116286 YP_002424056.1 CDS Mchl_5370 NC_011757.1 5759658 5760254 R hypothetical protein complement(5759658..5760254) Methylobacterium extorquens CM4 7116287 YP_002424057.1 CDS Mchl_5371 NC_011757.1 5760487 5761131 R KEGG: ypg:YpAngola_0075 hypothetical protein; hypothetical protein complement(5760487..5761131) Methylobacterium extorquens CM4 7116288 YP_002424058.1 CDS Mchl_5372 NC_011757.1 5761142 5761774 R PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: bov:BOV_0279 recombinase; Resolvase domain complement(5761142..5761774) Methylobacterium extorquens CM4 7116289 YP_002424059.1 CDS Mchl_5373 NC_011757.1 5762226 5763923 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0141 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5762226..5763923 Methylobacterium extorquens CM4 7116290 YP_002424060.1 CDS Mchl_5374 NC_011757.1 5763923 5764246 D KEGG: mex:Mext_0140 hypothetical protein; hypothetical protein 5763923..5764246 Methylobacterium extorquens CM4 7116291 YP_002424061.1 CDS Mchl_5375 NC_011757.1 5765018 5765281 D KEGG: mpo:Mpop_0307 hypothetical protein; hypothetical protein 5765018..5765281 Methylobacterium extorquens CM4 7116292 YP_002424062.1 CDS Mchl_5376 NC_011757.1 5765382 5765702 R KEGG: mpo:Mpop_3310 hypothetical protein; hypothetical protein complement(5765382..5765702) Methylobacterium extorquens CM4 7116293 YP_002424063.1 CDS Mchl_5377 NC_011757.1 5766046 5767044 R PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_0102 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(5766046..5767044) Methylobacterium extorquens CM4 7116294 YP_002424064.1 CDS Mchl_5378 NC_011757.1 5767281 5768150 R PFAM: integrase catalytic region; KEGG: mpo:Mpop_3817 integrase catalytic region; integrase catalytic subunit complement(5767281..5768150) Methylobacterium extorquens CM4 7116295 YP_002424065.1 CDS Mchl_5379 NC_011757.1 5768189 5768464 R PFAM: transposase IS3/IS911 family protein; KEGG: mpo:Mpop_3816 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(5768189..5768464) Methylobacterium extorquens CM4 7116296 YP_002424066.1 CDS Mchl_5380 NC_011757.1 5768649 5771321 D KEGG: mpo:Mpop_4105 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 5768649..5771321 Methylobacterium extorquens CM4 7116297 YP_002424067.1 CDS Mchl_5381 NC_011757.1 5771525 5773249 R PFAM: AMP-dependent synthetase and ligase; KEGG: azc:AZC_2874 AMP-dependent synthetase; AMP-dependent synthetase and ligase complement(5771525..5773249) Methylobacterium extorquens CM4 7116298 YP_002424068.1 CDS Mchl_5382 NC_011757.1 5773394 5774368 D hypothetical protein 5773394..5774368 Methylobacterium extorquens CM4 7116299 YP_002424069.1 CDS Mchl_5383 NC_011757.1 5774365 5774952 D hypothetical protein 5774365..5774952 Methylobacterium extorquens CM4 7116300 YP_002424070.1 CDS Mchl_5384 NC_011757.1 5775035 5775829 R KEGG: vei:Veis_3747 hypothetical protein; hypothetical protein complement(5775035..5775829) Methylobacterium extorquens CM4 7116301 YP_002424071.1 CDS Mchl_5385 NC_011757.1 5776005 5777804 R PFAM: integrase family protein; KEGG: ret:RHE_CH00241 recombinase protein, phage integrase family; integrase family protein complement(5776005..5777804) Methylobacterium extorquens CM4 7116302 YP_002424072.1 CDS Mchl_5386 NC_011758.1 44 1483 D TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mrd:Mrad2831_5257 YVTN beta-propeller repeat-containing protein; 40-residue YVTN family beta-propeller repeat protein 44..1483 Methylobacterium extorquens CM4 7119086 YP_002424073.1 CDS Mchl_5387 NC_011758.1 1533 1853 R KEGG: mrd:Mrad2831_4216 sulfite:cytochrome C oxidoreductase subunit B; sulfite:cytochrome C oxidoreductase subunit B complement(1533..1853) Methylobacterium extorquens CM4 7119087 YP_002424074.1 CDS Mchl_5388 NC_011758.1 1867 3078 R PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: mrd:Mrad2831_4215 oxidoreductase molybdopterin binding; oxidoreductase molybdopterin binding complement(1867..3078) Methylobacterium extorquens CM4 7119088 YP_002424075.1 CDS Mchl_5389 NC_011758.1 3198 3899 R KEGG: xau:Xaut_2673 transmembrane anti-sigma factor; transmembrane anti-sigma factor complement(3198..3899) Methylobacterium extorquens CM4 7119089 YP_002424076.1 CDS Mchl_5390 NC_011758.1 3899 4459 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: xau:Xaut_2674 ECF subfamily RNA polymerase sigma-24 factor; RNA polymerase, sigma-24 subunit, ECF subfamily complement(3899..4459) Methylobacterium extorquens CM4 7119090 YP_002424077.1 CDS Mchl_5391 NC_011758.1 4842 6287 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: mpo:Mpop_0054 GntR family transcriptional regulator with aminotransferase domain; GntR family transcriptional regulator complement(4842..6287) Methylobacterium extorquens CM4 7119091 YP_002424078.1 CDS Mchl_5392 NC_011758.1 6628 7110 D KEGG: mpo:Mpop_0055 hypothetical protein; hypothetical protein 6628..7110 Methylobacterium extorquens CM4 7119092 YP_002424079.1 CDS Mchl_5393 NC_011758.1 7191 8267 D PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mpo:Mpop_0056 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 7191..8267 Methylobacterium extorquens CM4 7119093 YP_002424080.1 CDS Mchl_5394 NC_011758.1 8221 9324 D PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mpo:Mpop_0057 radical SAM protein; radical SAM protein 8221..9324 Methylobacterium extorquens CM4 7119094 YP_002424081.1 CDS Mchl_5395 NC_011758.1 9321 9866 D PFAM: GCN5-related N-acetyltransferase; KEGG: mpo:Mpop_0058 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase 9321..9866 Methylobacterium extorquens CM4 7119095 YP_002424082.1 CDS Mchl_5396 NC_011758.1 9866 10861 D PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: mpo:Mpop_0059 AIR synthase related protein; AIR synthase related protein 9866..10861 Methylobacterium extorquens CM4 7119096 YP_002424083.1 CDS Mchl_5397 NC_011758.1 10858 12033 D PFAM: glycosyl transferase group 1; KEGG: mpo:Mpop_0061 glycosyl transferase group 1; glycosyl transferase group 1 10858..12033 Methylobacterium extorquens CM4 7119097 YP_002424084.1 CDS Mchl_5398 NC_011758.1 12026 12307 D KEGG: mpo:Mpop_0062 hypothetical protein; hypothetical protein 12026..12307 Methylobacterium extorquens CM4 7119098 YP_002424085.1 CDS Mchl_5399 NC_011758.1 12346 13614 D PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpo:Mpop_0063 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase 12346..13614 Methylobacterium extorquens CM4 7119099 YP_002424086.1 CDS Mchl_5400 NC_011758.1 13894 14505 D PFAM: cobalamin synthesis CobW domain protein; KEGG: mrd:Mrad2831_0862 cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein 13894..14505 Methylobacterium extorquens CM4 7119100 YP_002424087.1 CDS Mchl_5401 NC_011758.1 15580 15933 D hypothetical protein 15580..15933 Methylobacterium extorquens CM4 7119101 YP_002424088.1 CDS Mchl_5402 NC_011758.1 16058 16516 D KEGG: rpt:Rpal_1148 hypothetical protein; hypothetical protein 16058..16516 Methylobacterium extorquens CM4 7119102 YP_002424089.1 CDS Mchl_5403 NC_011758.1 17416 18255 D PFAM: resolvase; Recombinase; KEGG: nha:Nham_3864 recombinase; resolvase 17416..18255 Methylobacterium extorquens CM4 7119103 YP_002424090.1 CDS Mchl_5404 NC_011758.1 18620 20836 D PFAM: resolvase; Recombinase; KEGG: mpo:Mpop_3842 resolvase domain; Recombinase 18620..20836 Methylobacterium extorquens CM4 7119104 YP_002424091.1 CDS Mchl_5405 NC_011758.1 20860 22173 R PFAM: chloride channel core; KEGG: met:M446_6166 chloride channel core; chloride channel core complement(20860..22173) Methylobacterium extorquens CM4 7119105 YP_002424092.1 CDS Mchl_5406 NC_011758.1 22845 23594 R SMART: TIR protein; KEGG: mex:Mext_1920 TIR protein; TIR protein complement(22845..23594) Methylobacterium extorquens CM4 7119106 YP_002424093.1 CDS Mchl_5407 NC_011758.1 23597 23758 R hypothetical protein complement(23597..23758) Methylobacterium extorquens CM4 7119107 YP_002424094.1 CDS Mchl_5408 NC_011758.1 24059 25825 R KEGG: cbk:CLL_A2630 sec-C motif domain protein; hypothetical protein complement(24059..25825) Methylobacterium extorquens CM4 7119108 YP_002424095.1 CDS Mchl_5409 NC_011758.1 25970 26215 R hypothetical protein complement(25970..26215) Methylobacterium extorquens CM4 7119109 YP_002424096.1 CDS Mchl_5411 NC_011758.1 27357 29516 R PFAM: protein of unknown function DUF323; KEGG: sco:SCO0305 hypothetical protein; hypothetical protein complement(27357..29516) Methylobacterium extorquens CM4 7119111 YP_002424097.1 CDS Mchl_5412 NC_011758.1 29628 32981 R PFAM: UvrD/REP helicase; KEGG: rpa:RPA2215 ATP-dependent exodeoxyribonuclease (subunit A); UvrD/REP helicase complement(29628..32981) Methylobacterium extorquens CM4 7119195 YP_002424098.1 CDS Mchl_5413 NC_011758.1 32981 35641 R KEGG: xau:Xaut_2986 hypothetical protein; hypothetical protein complement(32981..35641) Methylobacterium extorquens CM4 7119196 YP_002424099.1 CDS Mchl_5414 NC_011758.1 35914 38181 R PFAM: helicase; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: rpe:RPE_2448 DEAD/DEAH box helicase; DEAD/DEAH box helicase complement(35914..38181) Methylobacterium extorquens CM4 7119197 YP_002424100.1 CDS Mchl_5415 NC_011758.1 38156 39481 R KEGG: rpb:RPB_2542 hypothetical protein; hypothetical protein complement(38156..39481) Methylobacterium extorquens CM4 7119198 YP_002424101.1 CDS Mchl_5416 NC_011758.1 39487 41730 R KEGG: nha:Nham_2000 hypothetical protein; hypothetical protein complement(39487..41730) Methylobacterium extorquens CM4 7119199 YP_002424102.1 CDS Mchl_5417 NC_011758.1 41684 42637 R KEGG: LOC771139; hypothetical protein LOC771139; hypothetical protein complement(41684..42637) Methylobacterium extorquens CM4 7119200 YP_002424103.1 CDS Mchl_5418 NC_011758.1 42687 43184 R hypothetical protein complement(42687..43184) Methylobacterium extorquens CM4 7119201 YP_002424104.1 CDS Mchl_5419 NC_011758.1 43297 43812 R hypothetical protein complement(43297..43812) Methylobacterium extorquens CM4 7119202 YP_002424105.1 CDS Mchl_5420 NC_011758.1 44996 45385 D hypothetical protein 44996..45385 Methylobacterium extorquens CM4 7119203 YP_002424106.1 CDS Mchl_5421 NC_011758.1 46428 46925 D hypothetical protein 46428..46925 Methylobacterium extorquens CM4 7119204 YP_002424107.1 CDS Mchl_5424 NC_011758.1 48133 48327 R hypothetical protein complement(48133..48327) Methylobacterium extorquens CM4 7119207 YP_002424108.1 CDS Mchl_5425 NC_011758.1 48328 49563 R KEGG: rle:pRL100078 hypothetical protein; hypothetical protein complement(48328..49563) Methylobacterium extorquens CM4 7119208 YP_002424109.1 CDS Mchl_5426 NC_011758.1 49705 49989 D hypothetical protein 49705..49989 Methylobacterium extorquens CM4 7119209 YP_002424110.1 CDS Mchl_5427 NC_011758.1 49964 50875 R hypothetical protein complement(49964..50875) Methylobacterium extorquens CM4 7119210 YP_002424111.1 CDS Mchl_5428 NC_011758.1 51152 52996 R PFAM: alpha amylase; SMART: alpha amylase catalytic sub domain; KEGG: mba:Mbar_A1790 alpha-amylase; alpha amylase complement(51152..52996) Methylobacterium extorquens CM4 7119211 YP_002424112.1 CDS Mchl_5429 NC_011758.1 53292 54203 R KEGG: rsq:Rsph17025_4384 hypothetical protein; hypothetical protein complement(53292..54203) Methylobacterium extorquens CM4 7119212 YP_002424113.1 CDS Mchl_5430 NC_011758.1 54238 55821 R KEGG: rsq:Rsph17025_4383 type I restriction-modification system methyltransferase subunit-like protein; type I restriction-modification system methyltransferase subunit-like protein complement(54238..55821) Methylobacterium extorquens CM4 7119213 YP_002424114.1 CDS Mchl_5431 NC_011758.1 56175 57365 D KEGG: rha:RHA1_ro09119 hypothetical protein; hypothetical protein 56175..57365 Methylobacterium extorquens CM4 7119214 YP_002424115.1 CDS Mchl_5432 NC_011758.1 57362 58309 D KEGG: rfr:Rfer_1067 hypothetical protein; hypothetical protein 57362..58309 Methylobacterium extorquens CM4 7119215 YP_002424116.1 CDS Mchl_5433 NC_011758.1 58625 59275 D PFAM: Domain of unknown function DUF1863; KEGG: pca:Pcar_2917 hypothetical protein; hypothetical protein 58625..59275 Methylobacterium extorquens CM4 7119216 YP_002424117.1 CDS Mchl_5434 NC_011758.1 59646 60887 D SMART: TIR protein; KEGG: nwi:Nwi_0257 hypothetical protein; TIR protein 59646..60887 Methylobacterium extorquens CM4 7119217 YP_002424118.1 CDS Mchl_5436 NC_011758.1 61517 62251 D PFAM: protein of unknown function DUF1275; KEGG: mpo:Mpop_2916 protein of unknown function DUF1275; hypothetical protein 61517..62251 Methylobacterium extorquens CM4 7119219 YP_002424119.1 CDS Mchl_5437 NC_011758.1 62546 63961 R PFAM: integrase; KEGG: mpo:Mpop_2395 integrase; integrase complement(62546..63961) Methylobacterium extorquens CM4 7119220 YP_002424120.1 CDS Mchl_5439 NC_011758.1 64860 66080 R PFAM: transposase mutator type; KEGG: nha:Nham_3015 transposase, mutator type; transposase mutator type complement(64860..66080) Methylobacterium extorquens CM4 7119222 YP_002424121.1 CDS Mchl_5440 NC_011758.1 66102 66836 R PFAM: transposase IS111A/IS1328/IS1533; KEGG: mex:Mext_3686 transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533 complement(66102..66836) Methylobacterium extorquens CM4 7119223 YP_002424122.1 CDS Mchl_5441 NC_011758.1 67086 68285 D PFAM: transposase mutator type; KEGG: met:M446_7018 hypothetical protein; transposase mutator type 67086..68285 Methylobacterium extorquens CM4 7119224 YP_002424123.1 CDS Mchl_5444 NC_011758.1 69469 71268 R TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: pyrrolo-quinoline quinone; KEGG: mex:Mext_1809 methanol/ethanol family PQQ-dependent dehydrogenase; PQQ-dependent dehydrogenase, methanol/ethanol family complement(69469..71268) Methylobacterium extorquens CM4 7119227 YP_002424124.1 CDS Mchl_5445 NC_011758.1 71459 72895 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: bbt:BBta_5349 two-component sensor histidine kinase; histidine kinase 71459..72895 Methylobacterium extorquens CM4 7119228 YP_002424125.1 CDS Mchl_5446 NC_011758.1 72892 73548 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpo:Mpop_3468 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 72892..73548 Methylobacterium extorquens CM4 7119229 YP_002424126.1 CDS Mchl_5447 NC_011758.1 73838 74671 R PFAM: integrase; KEGG: nwi:Nwi_2918 integrase, catalytic region; integrase complement(73838..74671) Methylobacterium extorquens CM4 7119230 YP_002424127.1 CDS Mchl_5448 NC_011758.1 74749 75639 R PFAM: integrase; KEGG: gdi:GDI0980 integrase; integrase complement(74749..75639) Methylobacterium extorquens CM4 7119231 YP_002424128.1 CDS Mchl_5449 NC_011758.1 75636 75920 R PFAM: transposase IS3/IS911 family protein; KEGG: sal:Sala_0416 transposase IS3/IS911; transposase IS3/IS911 family protein complement(75636..75920) Methylobacterium extorquens CM4 7119232 YP_002424129.1 CDS Mchl_5451 NC_011758.1 76970 77950 R PFAM: integrase; transposase IS3/IS911 family protein; KEGG: nwi:Nwi_3112 helix-turn-helix, fis-type; integrase complement(76970..77950) Methylobacterium extorquens CM4 7119234 YP_002424130.1 CDS Mchl_5452 NC_011758.1 77947 78321 R PFAM: transposase IS3/IS911 family protein; KEGG: nwi:Nwi_3087 transposase; transposase IS3/IS911 family protein complement(77947..78321) Methylobacterium extorquens CM4 7119235 YP_002424131.1 CDS Mchl_5453 NC_011758.1 78681 79760 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ecp:ECP_4551 transposase; transposase IS116/IS110/IS902 family protein 78681..79760 Methylobacterium extorquens CM4 7119236 YP_002424132.1 CDS Mchl_5455 NC_011758.1 80197 81336 R PFAM: CBS domain containing protein; HPP family protein; KEGG: mex:Mext_2087 HPP family protein?; hypothetical protein complement(80197..81336) Methylobacterium extorquens CM4 7119238 YP_002424133.1 CDS Mchl_5456 NC_011758.1 81523 81843 D hypothetical protein 81523..81843 Methylobacterium extorquens CM4 7119239 YP_002424134.1 CDS Mchl_5457 NC_011758.1 82319 82855 R KEGG: mex:Mext_2817 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(82319..82855) Methylobacterium extorquens CM4 7119240 YP_002424135.1 CDS Mchl_5458 NC_011758.1 82852 83814 R PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mlo:mlr2177 hypothetical protein; pseudouridine synthase complement(82852..83814) Methylobacterium extorquens CM4 7119241 YP_002424136.1 CDS Mchl_5459 NC_011758.1 83825 85087 R PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: oan:Oant_0300 Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase complement(83825..85087) Methylobacterium extorquens CM4 7119242 YP_002424137.1 CDS Mchl_5460 NC_011758.1 85214 86371 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase complement(85214..86371) Methylobacterium extorquens CM4 7119243 YP_002424138.1 CDS Mchl_5461 NC_011758.1 86455 87714 R TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; KEGG: mpo:Mpop_1834 squalene-associated FAD-dependent desaturase; squalene-associated FAD-dependent desaturase complement(86455..87714) Methylobacterium extorquens CM4 7119244 YP_002424139.1 CDS Mchl_5462 NC_011758.1 87722 89158 R PFAM: homospermidine synthase; KEGG: mex:Mext_2042 homospermidine synthase; homospermidine synthase complement(87722..89158) Methylobacterium extorquens CM4 7119245 YP_002424140.1 CDS Mchl_5463 NC_011758.1 89257 89706 R KEGG: mex:Mext_3358 hypothetical protein; GreA/GreB family elongation factor complement(89257..89706) Methylobacterium extorquens CM4 7119246 YP_002424141.1 CDS Mchl_5464 NC_011758.1 90596 91009 D PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mpo:Mpop_4181 GreA/GreB family elongation factor; GreA/GreB family elongation factor 90596..91009 Methylobacterium extorquens CM4 7119247 YP_002424142.1 CDS Mchl_5466 NC_011758.1 93094 93348 R hypothetical protein complement(93094..93348) Methylobacterium extorquens CM4 7119249 YP_002424143.1 CDS Mchl_5467 NC_011758.1 93602 94045 R KEGG: noc:Noc_1918 transcription elongation factor; GreA/GreB family elongation factor complement(93602..94045) Methylobacterium extorquens CM4 7119250 YP_002424144.1 CDS Mchl_5468 NC_011758.1 94073 94495 R PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mex:Mext_3357 transcription elongation factor GreA/GreB domain-containing protein; GreA/GreB family elongation factor complement(94073..94495) Methylobacterium extorquens CM4 7119251 YP_002424145.1 CDS Mchl_5469 NC_011758.1 94511 94663 R hypothetical protein complement(94511..94663) Methylobacterium extorquens CM4 7119252 YP_002424146.1 CDS Mchl_5470 NC_011758.1 95293 95532 D hypothetical protein 95293..95532 Methylobacterium extorquens CM4 7119253 YP_002424147.1 CDS Mchl_5471 NC_011758.1 96233 96430 D hypothetical protein 96233..96430 Methylobacterium extorquens CM4 7119254 YP_002424148.1 CDS Mchl_5472 NC_011758.1 96470 97399 D PFAM: UspA domain protein; KEGG: pla:Plav_3480 UspA domain-containing protein; UspA domain protein 96470..97399 Methylobacterium extorquens CM4 7119255 YP_002424149.1 CDS Mchl_5473 NC_011758.1 97460 98110 D KEGG: mpo:Mpop_3736 sigma 54 modulation protein/ribosomal protein S30EA; hypothetical protein 97460..98110 Methylobacterium extorquens CM4 7119256 YP_002424150.1 CDS Mchl_5474 NC_011758.1 98107 98304 D hypothetical protein 98107..98304 Methylobacterium extorquens CM4 7119257 YP_002424151.1 CDS Mchl_5479 NC_011758.1 100233 101293 D KEGG: rle:pRL70033 hypothetical protein; transposase join(100233..100724,100724..101293) Methylobacterium extorquens CM4 7119262 YP_002424152.1 CDS Mchl_5480 NC_011758.1 101486 105400 D KEGG: rru:Rru_A0502 hypothetical protein; hypothetical protein 101486..105400 Methylobacterium extorquens CM4 7119263 YP_002424153.1 CDS Mchl_5483 NC_011758.1 106307 106774 D KEGG: gdi:GDI2860 integrase; integrase 106307..106774 Methylobacterium extorquens CM4 7119266 YP_002424154.1 CDS Mchl_5484 NC_011758.1 106971 107255 D PFAM: transposase IS3/IS911 family protein; KEGG: sal:Sala_0416 transposase IS3/IS911; transposase IS3/IS911 family protein 106971..107255 Methylobacterium extorquens CM4 7119267 YP_002424155.1 CDS Mchl_5485 NC_011758.1 107252 108142 D PFAM: integrase; KEGG: gdi:GDI0980 integrase; integrase 107252..108142 Methylobacterium extorquens CM4 7119268 YP_002424156.1 CDS Mchl_5486 NC_011758.1 108226 108474 D KEGG: mrd:Mrad2831_6417 resolvase domain-containing protein; hypothetical protein 108226..108474 Methylobacterium extorquens CM4 7119269 YP_002424157.1 CDS Mchl_5487 NC_011758.1 108477 109943 R KEGG: nwi:Nwi_3121 hypothetical protein; hypothetical protein complement(108477..109943) Methylobacterium extorquens CM4 7119270 YP_002424158.1 CDS Mchl_5488 NC_011758.1 110278 112821 R KEGG: nwi:Nwi_2088 hypothetical protein; hypothetical protein complement(110278..112821) Methylobacterium extorquens CM4 7119271 YP_002424159.1 CDS Mchl_5489 NC_011758.1 112874 113884 R PFAM: ATPase AAA; SMART: AAA ATPase; KEGG: met:M446_0961 ATPase central domain-containing protein; ATPase AAA complement(112874..113884) Methylobacterium extorquens CM4 7119272 YP_002424160.1 CDS Mchl_5491 NC_011758.1 116385 118322 R TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: prenyltransferase/squalene oxidase; KEGG: gbe:GbCGDNIH1_2107 squalene--hopene cyclase; squalene-hopene cyclase complement(116385..118322) Methylobacterium extorquens CM4 7119274 YP_002424161.1 CDS Mchl_5492 NC_011758.1 118428 118961 R PFAM: regulatory protein TetR; KEGG: mrd:Mrad2831_0286 TetR family transcriptional regulator; TetR family transcriptional regulator complement(118428..118961) Methylobacterium extorquens CM4 7119275 YP_002424162.1 CDS Mchl_5493 NC_011758.1 119117 119461 D PFAM: small multidrug resistance protein; KEGG: hne:HNE_0908 SMR family multidrug efflux pump; small multidrug resistance protein 119117..119461 Methylobacterium extorquens CM4 7119276 YP_002424163.1 CDS Mchl_5494 NC_011758.1 119464 119889 D PFAM: regulatory protein TetR; KEGG: rpd:RPD_3328 regulatory protein, TetR; TetR family transcriptional regulator 119464..119889 Methylobacterium extorquens CM4 7119194 YP_002424164.1 CDS Mchl_5495 NC_011758.1 120081 121235 D TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: mrd:Mrad2831_0285 RND family efflux transporter MFP subunit; efflux transporter RND family, MFP subunit 120081..121235 Methylobacterium extorquens CM4 7119277 YP_002424165.1 CDS Mchl_5496 NC_011758.1 121255 124416 D TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mrd:Mrad2831_0284 hydrophobe/amphiphile efflux-1 (HAE1) family protein; transporter hydrophobe/amphiphile efflux-1 (HAE1) family 121255..124416 Methylobacterium extorquens CM4 7119278 YP_002424166.1 CDS Mchl_5498 NC_011758.1 125326 127356 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mpo:Mpop_3694 integral membrane sensor signal transduction histidine kinase; histidine kinase complement(125326..127356) Methylobacterium extorquens CM4 7119280 YP_002424167.1 CDS Mchl_5499 NC_011758.1 127344 128714 R PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: mpo:Mpop_3695 two component, sigma54 specific, transcriptional regulator, fis family; Fis family transcriptional regulator complement(127344..128714) Methylobacterium extorquens CM4 7119281 YP_002424168.1 CDS Mchl_5500 NC_011758.1 128844 130481 R PFAM: major facilitator superfamily MFS_1; KEGG: mpo:Mpop_3696 major facilitator superfamily MFS_1; major facilitator superfamily MFS_1 complement(128844..130481) Methylobacterium extorquens CM4 7119282 YP_002424169.1 CDS Mchl_5501 NC_011758.1 130967 133162 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mpo:Mpop_3697 TonB-dependent receptor; TonB-dependent receptor 130967..133162 Methylobacterium extorquens CM4 7119283 YP_002424170.1 CDS Mchl_5502 NC_011758.1 133327 134093 D KEGG: mex:Mext_0768 transposase; hypothetical protein join(133327..133644,133644..134093) Methylobacterium extorquens CM4 7119284 YP_002424171.1 CDS Mchl_5503 NC_011758.1 134214 134600 D KEGG: mpo:Mpop_3698 hypothetical protein; hypothetical protein 134214..134600 Methylobacterium extorquens CM4 7119285 YP_002424172.1 CDS Mchl_5504 NC_011758.1 134597 135490 D PFAM: Di-haem cytochrome C peroxidase; KEGG: mpo:Mpop_3699 cytochrome-c peroxidase; Di-heme cytochrome C peroxidase 134597..135490 Methylobacterium extorquens CM4 7119286 YP_002424173.1 CDS Mchl_5505 NC_011758.1 135543 136523 R PFAM: integrase; transposase IS3/IS911 family protein; KEGG: nwi:Nwi_3112 helix-turn-helix, fis-type; integrase complement(135543..136523) Methylobacterium extorquens CM4 7119287 YP_002424174.1 CDS Mchl_5506 NC_011758.1 136520 136894 R PFAM: transposase IS3/IS911 family protein; KEGG: nwi:Nwi_3087 transposase; transposase IS3/IS911 family protein complement(136520..136894) Methylobacterium extorquens CM4 7119288 YP_002424175.1 CDS Mchl_5507 NC_011758.1 137274 137627 D KEGG: mrd:Mrad2831_6176 hypothetical protein; hypothetical protein 137274..137627 Methylobacterium extorquens CM4 7119289 YP_002424176.1 CDS Mchl_5508 NC_011758.1 137680 138192 R KEGG: azc:AZC_3125 hypothetical protein; hypothetical protein complement(137680..138192) Methylobacterium extorquens CM4 7119290 YP_002424177.1 CDS Mchl_5509 NC_011758.1 138597 139586 R KEGG: mpo:Mpop_3704 hypothetical protein; hypothetical protein complement(138597..139586) Methylobacterium extorquens CM4 7119291 YP_002424178.1 CDS Mchl_5510 NC_011758.1 139688 140941 R KEGG: mpo:Mpop_3705 hypothetical protein; hypothetical protein complement(139688..140941) Methylobacterium extorquens CM4 7119292 YP_002424179.1 CDS Mchl_5511 NC_011758.1 141034 141378 R TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein LysR; KEGG: mpo:Mpop_3706 ModE family transcriptional regulator; ModE family transcriptional regulator complement(141034..141378) Methylobacterium extorquens CM4 7119293 YP_002424180.1 CDS Mchl_5512 NC_011758.1 141474 142742 R TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mpo:Mpop_3707 molybdenum cofactor synthesis domain protein; molybdenum cofactor synthesis protein complement(141474..142742) Methylobacterium extorquens CM4 7119294 YP_002424181.1 CDS Mchl_5513 NC_011758.1 142862 143917 D PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: gdi:GDI2530 NADP-dependent alcohol dehydrogenase C; alcohol dehydrogenase zinc-binding domain protein 142862..143917 Methylobacterium extorquens CM4 7119295 YP_002424182.1 CDS Mchl_5514 NC_011758.1 143954 144751 D TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mpo:Mpop_3709 molybdenum ABC transporter periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 143954..144751 Methylobacterium extorquens CM4 7119296 YP_002424183.1 CDS Mchl_5515 NC_011758.1 144748 145440 D TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mpo:Mpop_3710 molybdate ABC transporter inner membrane subunit; molybdate ABC transporter inner membrane subunit 144748..145440 Methylobacterium extorquens CM4 7119297 YP_002424184.1 CDS Mchl_5516 NC_011758.1 145468 146544 D KEGG: mpo:Mpop_3711 molybdate ABC transporter ATPase subunit; TIGRFAM: molybdate ABC transporter ATPase; PFAM: ABC transporter related; TOBE domain protein; SMART: ATPase AAA; molybdate ABC transporter ATPase 145468..146544 Methylobacterium extorquens CM4 7119298 YP_002424185.1 CDS Mchl_5517 NC_011758.1 146704 146913 D PFAM: TOBE domain protein; KEGG: mpo:Mpop_3712 TOBE domain protein; TOBE domain protein 146704..146913 Methylobacterium extorquens CM4 7119299 YP_002424186.1 CDS Mchl_5519 NC_011758.1 147418 148011 D PFAM: resolvase; Resolvase helix-turn-helix domain protein; KEGG: mrd:Mrad2831_6417 resolvase domain-containing protein; resolvase 147418..148011 Methylobacterium extorquens CM4 7119301 YP_002424187.1 CDS Mchl_5520 NC_011758.1 148125 148979 R KEGG: mrd:Mrad2831_5044 hypothetical protein; hypothetical protein complement(148125..148979) Methylobacterium extorquens CM4 7119302 YP_002424188.1 CDS Mchl_5521 NC_011758.1 149203 149712 R PFAM: acetone carboxylase subunit gamma; KEGG: azc:AZC_2921 acetone carboxylase subunit gamma; acetone carboxylase subunit gamma complement(149203..149712) Methylobacterium extorquens CM4 7119303 YP_002424189.1 CDS Mchl_5522 NC_011758.1 149801 152131 R PFAM: hydantoinase B/oxoprolinase; KEGG: azc:AZC_2922 acetone carboxylase subunit alpha; hydantoinase B/oxoprolinase complement(149801..152131) Methylobacterium extorquens CM4 7119304 YP_002424190.1 CDS Mchl_5523 NC_011758.1 152169 154322 R PFAM: hydantoinase/oxoprolinase; hydantoinaseoxoprolinase domain protein; KEGG: azc:AZC_2923 acetone carboxylase subunit beta; 5-oxoprolinase (ATP-hydrolyzing) complement(152169..154322) Methylobacterium extorquens CM4 7119305 YP_002424191.1 CDS Mchl_5524 NC_011758.1 154558 156480 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: azc:AZC_2924 sigma54 specific transcriptional regulator; GAF modulated sigma54 specific transcriptional regulator, Fis family complement(154558..156480) Methylobacterium extorquens CM4 7119306 YP_002424192.1 CDS Mchl_5526 NC_011758.1 157559 158341 R PFAM: integrase; KEGG: bcj:BCAM1952 transposase; integrase complement(157559..158341) Methylobacterium extorquens CM4 7119308 YP_002424193.1 CDS Mchl_5527 NC_011758.1 158392 158658 R PFAM: transposase IS3/IS911 family protein; KEGG: dde:Dde_2906 Fis family transcriptional regulator; transposase IS3/IS911 family protein complement(158392..158658) Methylobacterium extorquens CM4 7119309 YP_002424194.1 CDS Mchl_5528 NC_011758.1 158724 159278 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mpo:Mpop_1933 response regulator receiver modulated diguanylate cyclase; diguanylate cyclase 158724..159278 Methylobacterium extorquens CM4 7119310 YP_002424195.1 CDS Mchl_5529 NC_011758.1 159275 159697 R KEGG: mrd:Mrad2831_6409 hypothetical protein; hypothetical protein complement(159275..159697) Methylobacterium extorquens CM4 7119311 YP_002424196.1 CDS Mchl_5530 NC_011758.1 159975 160145 D KEGG: mlo:msr9708 hypothetical protein; hypothetical protein 159975..160145 Methylobacterium extorquens CM4 7119312 YP_002424197.1 CDS Mchl_5531 NC_011758.1 160360 160872 D PFAM: ROSMUCR transcriptional regulator; KEGG: mrd:Mrad2831_4324 MucR family transcriptional regulator; MucR family transcriptional regulator 160360..160872 Methylobacterium extorquens CM4 7119313 YP_002424198.1 CDS Mchl_5532 NC_011758.1 161423 161740 D PFAM: protein of unknown function DUF736; KEGG: pde:Pden_1518 protein of unknown function DUF736; hypothetical protein 161423..161740 Methylobacterium extorquens CM4 7119314 YP_002424199.1 CDS Mchl_5533 NC_011758.1 161810 162067 D KEGG: rpc:RPC_2516 hypothetical protein; hypothetical protein 161810..162067 Methylobacterium extorquens CM4 7119315 YP_002424200.1 CDS Mchl_5534 NC_011758.1 162217 162936 R PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: rba:RB4967 DeoR family transcriptional regulator; hypothetical protein complement(162217..162936) Methylobacterium extorquens CM4 7119316 YP_002424201.1 CDS Mchl_5535 NC_011758.1 163023 163418 D PFAM: endoribonuclease L-PSP; KEGG: nfa:nfa26270 endoribonuclease; endoribonuclease L-PSP 163023..163418 Methylobacterium extorquens CM4 7119317 YP_002424202.1 CDS Mchl_5536 NC_011758.1 163531 163794 R KEGG: syf:Synpcc7942_2103 hypothetical protein; hypothetical protein complement(163531..163794) Methylobacterium extorquens CM4 7119318 YP_002424203.1 CDS Mchl_5538 NC_011758.1 164269 164559 D PFAM: transposase IS3/IS911 family protein; KEGG: mlo:msr5972 transposase; transposase IS3/IS911 family protein 164269..164559 Methylobacterium extorquens CM4 7119320 YP_002424204.1 CDS Mchl_5539 NC_011758.1 164556 165167 D KEGG: mlo:mlr6150 transposase; transposase 164556..165167 Methylobacterium extorquens CM4 7119321 YP_002424205.1 CDS Mchl_5540 NC_011758.1 165415 166494 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ecp:ECP_4551 transposase; transposase IS116/IS110/IS902 family protein 165415..166494 Methylobacterium extorquens CM4 7119322 YP_002424206.1 CDS Mchl_5542 NC_011758.1 166792 167652 R PFAM: aminoglycoside phosphotransferase; KEGG: mex:Mext_1755 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(166792..167652) Methylobacterium extorquens CM4 7119324 YP_002424207.1 CDS Mchl_5543 NC_011758.1 167882 168052 D hypothetical protein 167882..168052 Methylobacterium extorquens CM4 7119325 YP_002424208.1 CDS Mchl_5544 NC_011758.1 168076 169326 R PFAM: glycosyl transferase family 28; KEGG: mpo:Mpop_2090 glycosyl transferase family 28; glycosyl transferase family 28 complement(168076..169326) Methylobacterium extorquens CM4 7119326 YP_002424209.1 CDS Mchl_5545 NC_011758.1 169323 170636 R KEGG: mpo:Mpop_2089 hypothetical protein; hypothetical protein complement(169323..170636) Methylobacterium extorquens CM4 7119327 YP_002424210.1 CDS Mchl_5546 NC_011758.1 170926 171351 R KEGG: mrd:Mrad2831_6474 hypothetical protein; hypothetical protein complement(170926..171351) Methylobacterium extorquens CM4 7119328 YP_002424211.1 CDS Mchl_5547 NC_011758.1 171559 171771 D KEGG: oan:Oant_4758 hypothetical protein; hypothetical protein 171559..171771 Methylobacterium extorquens CM4 7119329 YP_002424212.1 CDS Mchl_5548 NC_011758.1 171787 172101 D KEGG: mes:Meso_4589 hypothetical protein; hypothetical protein 171787..172101 Methylobacterium extorquens CM4 7119330 YP_002424213.1 CDS Mchl_5549 NC_011758.1 172098 172484 D KEGG: mes:Meso_3818 hypothetical protein; hypothetical protein 172098..172484 Methylobacterium extorquens CM4 7119331 YP_002424214.1 CDS Mchl_5550 NC_011758.1 172551 172805 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: xau:Xaut_5007 prevent-host-death family protein; prevent-host-death family protein 172551..172805 Methylobacterium extorquens CM4 7119332 YP_002424215.1 CDS Mchl_5551 NC_011758.1 172789 173340 D KEGG: rle:pRL100319 hypothetical protein; hypothetical protein 172789..173340 Methylobacterium extorquens CM4 7119333 YP_002424216.1 CDS Mchl_5552 NC_011758.1 173413 173583 D KEGG: sal:Sala_2631 hypothetical protein; hypothetical protein 173413..173583 Methylobacterium extorquens CM4 7119334 YP_002424217.1 CDS Mchl_5553 NC_011758.1 173717 173959 D KEGG: mpo:Mpop_1378 hypothetical protein; hypothetical protein 173717..173959 Methylobacterium extorquens CM4 7119335 YP_002424218.1 CDS Mchl_5554 NC_011758.1 173963 174364 D PFAM: PilT protein; KEGG: mpo:Mpop_1379 PilT protein; PilT protein 173963..174364 Methylobacterium extorquens CM4 7119336 YP_002424219.1 CDS Mchl_5555 NC_011758.1 174776 175132 D PFAM: protein of unknown function DUF736; KEGG: gdi:GDI2877 hypothetical protein; hypothetical protein 174776..175132 Methylobacterium extorquens CM4 7119337 YP_002424220.1 CDS Mchl_5556 NC_011758.1 175476 177167 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rru:Rru_A0755 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 175476..177167 Methylobacterium extorquens CM4 7119338 YP_002424221.1 CDS Mchl_5557 NC_011758.1 177559 178767 R PFAM: transposase mutator type; KEGG: mpo:Mpop_5445 transposase mutator type; transposase mutator type complement(177559..178767) Methylobacterium extorquens CM4 7119339 YP_002424222.1 CDS Mchl_5558 NC_011758.1 178970 179986 D PFAM: domain of unknown function DUF1738; KEGG: mrd:Mrad2831_6049 hypothetical protein; hypothetical protein 178970..179986 Methylobacterium extorquens CM4 7119340 YP_002424223.1 CDS Mchl_5559 NC_011758.1 179986 180765 D KEGG: mes:Meso_3816 hypothetical protein; hypothetical protein 179986..180765 Methylobacterium extorquens CM4 7119341 YP_002424224.1 CDS Mchl_5560 NC_011758.1 180777 181334 R hypothetical protein complement(180777..181334) Methylobacterium extorquens CM4 7119342 YP_002424225.1 CDS Mchl_5561 NC_011758.1 181433 181591 R hypothetical protein complement(181433..181591) Methylobacterium extorquens CM4 7119343 YP_002424226.1 CDS Mchl_5562 NC_011758.1 181658 181930 R hypothetical protein complement(181658..181930) Methylobacterium extorquens CM4 7119344 YP_002424227.1 CDS Mchl_5563 NC_011758.1 182426 182890 D hypothetical protein 182426..182890 Methylobacterium extorquens CM4 7119345 YP_002424228.1 CDS Mchl_5564 NC_011758.1 183007 185286 D SMART: ParB domain protein nuclease; KEGG: rpa:RPA2251 plasmid stabilization protein; ParB domain protein nuclease 183007..185286 Methylobacterium extorquens CM4 7119346 YP_002424229.1 CDS Mchl_5565 NC_011758.1 185471 185785 D KEGG: bbt:BBta_7412 hypothetical protein; hypothetical protein 185471..185785 Methylobacterium extorquens CM4 7119347 YP_002424230.1 CDS Mchl_5566 NC_011758.1 185797 186771 R PFAM: ROSMUCR transcriptional regulator; KEGG: mrd:Mrad2831_3868 MucR family transcriptional regulator; MucR family transcriptional regulator complement(185797..186771) Methylobacterium extorquens CM4 7119348 YP_002424231.1 CDS Mchl_5567 NC_011758.1 187004 191380 D KEGG: mes:Meso_3828 probably methylase/helicase; probably methylase/helicase 187004..191380 Methylobacterium extorquens CM4 7119349 YP_002424232.1 CDS Mchl_5568 NC_011758.1 191406 192464 D KEGG: mrd:Mrad2831_6058 hypothetical protein; hypothetical protein 191406..192464 Methylobacterium extorquens CM4 7119350 YP_002424233.1 CDS Mchl_5569 NC_011758.1 192799 193728 D KEGG: mrd:Mrad2831_6059 hypothetical protein; hypothetical protein 192799..193728 Methylobacterium extorquens CM4 7119351 YP_002424234.1 CDS Mchl_5570 NC_011758.1 193725 194192 R hypothetical protein complement(193725..194192) Methylobacterium extorquens CM4 7119352 YP_002424235.1 CDS Mchl_5571 NC_011758.1 195014 195187 D KEGG: mrd:Mrad2831_6064 hypothetical protein; hypothetical protein 195014..195187 Methylobacterium extorquens CM4 7119353 YP_002424236.1 CDS Mchl_5572 NC_011758.1 195391 197415 R VirD4 family; conjugal transfer coupling protein TraG complement(195391..197415) Methylobacterium extorquens CM4 7119354 YP_002424237.1 CDS Mchl_5573 NC_011758.1 197412 197609 R PFAM: Conjugal transfer TraD family protein; KEGG: mrd:Mrad2831_6101 conjugal transfer protein TraD; conjugal transfer protein TraD complement(197412..197609) Methylobacterium extorquens CM4 7119355 YP_002424238.1 CDS Mchl_5574 NC_011758.1 197593 197871 R KEGG: mrd:Mrad2831_6102 hypothetical protein; hypothetical protein complement(197593..197871) Methylobacterium extorquens CM4 7119356 YP_002424239.1 CDS Mchl_5575 NC_011758.1 198365 202102 D TIGRFAM: Ti-type conjugative transfer relaxase TraA; PFAM: MobA/MobL protein; KEGG: rle:pRL80122 conjugal transfer protein TraA; Ti-type conjugative transfer relaxase TraA 198365..202102 Methylobacterium extorquens CM4 7119357 YP_002424240.1 CDS Mchl_5576 NC_011758.1 202258 202608 D KEGG: gox:GOX2661 hypothetical protein; hypothetical protein 202258..202608 Methylobacterium extorquens CM4 7119112 YP_002424241.1 CDS Mchl_5577 NC_011758.1 202605 203222 D hypothetical protein 202605..203222 Methylobacterium extorquens CM4 7119113 YP_002424242.1 CDS Mchl_5578 NC_011758.1 203451 203738 D hypothetical protein 203451..203738 Methylobacterium extorquens CM4 7119114 YP_002424243.1 CDS Mchl_5579 NC_011758.1 203735 205033 D PFAM: filamentation induced by cAMP protein Fic; KEGG: dsy:DSY2769 hypothetical protein; filamentation induced by cAMP protein Fic 203735..205033 Methylobacterium extorquens CM4 7119115 YP_002424244.1 CDS Mchl_5580 NC_011758.1 205030 205944 D KEGG: pau:PA14_12280 apolipoprotein N-acyltransferase; hypothetical protein 205030..205944 Methylobacterium extorquens CM4 7119116 YP_002424245.1 CDS Mchl_5581 NC_011758.1 206019 206824 R KEGG: mrd:Mrad2831_6465 hypothetical protein; hypothetical protein complement(join(206019..206492,206492..206824)) Methylobacterium extorquens CM4 7119117 YP_002424246.1 CDS Mchl_5582 NC_011758.1 207108 208283 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: rpa:RPA2080 zinc-containing dehydrogenase; alcohol dehydrogenase GroES complement(207108..208283) Methylobacterium extorquens CM4 7119118 YP_002424247.1 CDS Mchl_5585 NC_011758.1 210800 211429 D PFAM: phosphoglycerate mutase; KEGG: swi:Swit_5116 phosphoglycerate mutase; phosphoglycerate mutase 210800..211429 Methylobacterium extorquens CM4 7119121 YP_002424248.1 CDS Mchl_5587 NC_011758.1 213468 214121 D KEGG: met:M446_6984 hypothetical protein; hypothetical protein 213468..214121 Methylobacterium extorquens CM4 7119123 YP_002424249.1 CDS Mchl_5588 NC_011758.1 214121 214453 D hypothetical protein 214121..214453 Methylobacterium extorquens CM4 7119124 YP_002424250.1 CDS Mchl_5590 NC_011758.1 214586 215391 R KEGG: mrd:Mrad2831_6465 hypothetical protein; hypothetical protein complement(join(214586..215059,215059..215391)) Methylobacterium extorquens CM4 7119126 YP_002424251.1 CDS Mchl_5591 NC_011758.1 215441 215857 R KEGG: bvi:Bcep1808_7364 hypothetical protein; hypothetical protein complement(215441..215857) Methylobacterium extorquens CM4 7119127 YP_002424252.1 CDS Mchl_5592 NC_011758.1 215854 218841 R KEGG: lpf:lpl0498 hypothetical protein; hypothetical protein complement(215854..218841) Methylobacterium extorquens CM4 7119128 YP_002424253.1 CDS Mchl_5593 NC_011758.1 218838 219308 R hypothetical protein complement(218838..219308) Methylobacterium extorquens CM4 7119129 YP_002424254.1 CDS Mchl_5594 NC_011758.1 219320 219574 R hypothetical protein complement(219320..219574) Methylobacterium extorquens CM4 7119130 YP_002424255.1 CDS Mchl_5595 NC_011758.1 219571 220854 R KEGG: lpc:LPC_2892 IcmE (DotG); hypothetical protein complement(219571..220854) Methylobacterium extorquens CM4 7119131 YP_002424256.1 CDS Mchl_5596 NC_011758.1 220866 222053 R KEGG: bvi:Bcep1808_7368 IcmK-like type IV secretion system protein; hypothetical protein complement(220866..222053) Methylobacterium extorquens CM4 7119132 YP_002424257.1 CDS Mchl_5597 NC_011758.1 222050 222706 R KEGG: bvi:Bcep1808_7369 hypothetical protein; hypothetical protein complement(222050..222706) Methylobacterium extorquens CM4 7119133 YP_002424258.1 CDS Mchl_5598 NC_011758.1 222703 222978 R hypothetical protein complement(222703..222978) Methylobacterium extorquens CM4 7119134 YP_002424259.1 CDS Mchl_5599 NC_011758.1 222980 223756 R KEGG: acb:A1S_0640 hypothetical protein; hypothetical protein complement(222980..223756) Methylobacterium extorquens CM4 7119135 YP_002424260.1 CDS Mchl_5600 NC_011758.1 224338 224904 D KEGG: ypi:YpsIP31758_B0118 type IV secretion system protein IcmC/DotIE; hypothetical protein 224338..224904 Methylobacterium extorquens CM4 7119136 YP_002424261.1 CDS Mchl_5601 NC_011758.1 224921 225442 R hypothetical protein complement(224921..225442) Methylobacterium extorquens CM4 7119137 YP_002424262.1 CDS Mchl_5602 NC_011758.1 225686 226840 D KEGG: bvi:Bcep1808_7385 DotC protein; hypothetical protein 225686..226840 Methylobacterium extorquens CM4 7119138 YP_002424263.1 CDS Mchl_5603 NC_011758.1 226844 228025 D PFAM: type II secretion system protein E; KEGG: cbd:CBUD_0350 Dot/Icm secretion system ATPase DotB; type II secretion system protein E 226844..228025 Methylobacterium extorquens CM4 7119139 YP_002424264.1 CDS Mchl_5604 NC_011758.1 228006 228644 D PFAM: protein of unknown function DUF882; peptidase M15A; KEGG: bvi:Bcep1808_7376 hypothetical protein; hypothetical protein 228006..228644 Methylobacterium extorquens CM4 7119140 YP_002424265.1 CDS Mchl_5605 NC_011758.1 228641 228886 D hypothetical protein 228641..228886 Methylobacterium extorquens CM4 7119141 YP_002424266.1 CDS Mchl_5606 NC_011758.1 228871 229548 D KEGG: bvi:Bcep1808_7328 hypothetical protein; hypothetical protein 228871..229548 Methylobacterium extorquens CM4 7119142 YP_002424267.1 CDS Mchl_5607 NC_011758.1 229545 229943 D hypothetical protein 229545..229943 Methylobacterium extorquens CM4 7119143 YP_002424268.1 CDS Mchl_5608 NC_011758.1 229940 230890 D PFAM: peptidase M23; KEGG: pvi:Cvib_1676 peptidase M23B; peptidase M23 229940..230890 Methylobacterium extorquens CM4 7119144 YP_002424269.1 CDS Mchl_5609 NC_011758.1 230887 231651 D KEGG: bvi:Bcep1808_7327 hypothetical protein; hypothetical protein 230887..231651 Methylobacterium extorquens CM4 7119145 YP_002424270.1 CDS Mchl_5610 NC_011758.1 231648 232670 D KEGG: bvi:Bcep1808_7326 hypothetical protein; hypothetical protein 231648..232670 Methylobacterium extorquens CM4 7119146 YP_002424271.1 CDS Mchl_5611 NC_011758.1 232667 233653 D KEGG: bvi:Bcep1808_7325 hypothetical protein; hypothetical protein 232667..233653 Methylobacterium extorquens CM4 7119147 YP_002424272.1 CDS Mchl_5612 NC_011758.1 233662 235920 D KEGG: rme:Rmet_2827 TraY/DotA-like type IV secretion system protein; hypothetical protein 233662..235920 Methylobacterium extorquens CM4 7119148 YP_002424273.1 CDS Mchl_5613 NC_011758.1 235924 237246 D hypothetical protein 235924..237246 Methylobacterium extorquens CM4 7119149 YP_002424274.1 CDS Mchl_5614 NC_011758.1 237350 237976 D KEGG: bja:bll8291 transposase; transposase 237350..237976 Methylobacterium extorquens CM4 7119150 YP_002424275.1 CDS Mchl_5615 NC_011758.1 237990 239216 D TIGRFAM: plasmid partitioning protein RepA; PFAM: regulatory protein MerR; cobyrinic acid ac-diamide synthase; KEGG: mrd:Mrad2831_5912 plasmid partitioning protein RepA; plasmid partitioning protein RepA 237990..239216 Methylobacterium extorquens CM4 7119151 YP_002424276.1 CDS Mchl_5616 NC_011758.1 239213 240217 D TIGRFAM: parB-like partition protein; plasmid partitioning protein RepB; PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: mrd:Mrad2831_5913 plasmid partitioning protein RepB; plasmid partitioning protein RepB 239213..240217 Methylobacterium extorquens CM4 7119152 YP_002424277.1 CDS Mchl_5617 NC_011758.1 240422 241633 D PFAM: replication protein C; KEGG: mes:Meso_4192 replication protein C; replication initiation protein RepC 240422..241633 Methylobacterium extorquens CM4 7119153 YP_002424278.1 CDS Mchl_5622 NC_011758.1 243536 244596 D KEGG: rle:pRL70033 hypothetical protein; transposase join(243536..244027,244027..244596) Methylobacterium extorquens CM4 7119158 YP_002424279.1 CDS Mchl_5624 NC_011758.1 245135 246649 D PFAM: integrase; KEGG: bja:bll5000 transposase; integrase 245135..246649 Methylobacterium extorquens CM4 7119160 YP_002424280.1 CDS Mchl_5625 NC_011758.1 246646 247470 D PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bja:bll4999 transposase; transposase 246646..247470 Methylobacterium extorquens CM4 7119161 YP_002424281.1 CDS Mchl_5626 NC_011758.1 247666 248919 D KEGG: met:M446_6861 transposase; transposase 247666..248919 Methylobacterium extorquens CM4 7119162 YP_002424282.1 CDS Mchl_5627 NC_011758.1 249082 249848 D KEGG: mex:Mext_0768 transposase; hypothetical protein join(249082..249399,249399..249848) Methylobacterium extorquens CM4 7119163 YP_002424283.1 CDS Mchl_5628 NC_011758.1 249897 250493 D PFAM: resolvase; Resolvase helix-turn-helix domain protein; KEGG: mrd:Mrad2831_6417 resolvase domain-containing protein; resolvase 249897..250493 Methylobacterium extorquens CM4 7119164 YP_002424284.1 CDS Mchl_5629 NC_011758.1 250577 250867 D PFAM: protein of unknown function DUF497; KEGG: cyt:cce_4967 hypothetical protein; hypothetical protein 250577..250867 Methylobacterium extorquens CM4 7119165 YP_002424285.1 CDS Mchl_5630 NC_011758.1 250851 251105 D KEGG: ccr:CC_0488 hypothetical protein; hypothetical protein 250851..251105 Methylobacterium extorquens CM4 7119166 YP_002424286.1 CDS Mchl_5632 NC_011758.1 252845 253650 D KEGG: scl:sce5216 transposase, probable; hypothetical protein join(252845..253177,253177..253650) Methylobacterium extorquens CM4 7119168 YP_002424287.1 CDS Mchl_5633 NC_011758.1 253765 254808 R KEGG: mst:Msp_0767 helicase; hypothetical protein complement(253765..254808) Methylobacterium extorquens CM4 7119169 YP_002424288.1 CDS Mchl_5634 NC_011758.1 254817 257630 R KEGG: pla:Plav_2607 methylase; methylase complement(254817..257630) Methylobacterium extorquens CM4 7119170 YP_002424289.1 CDS Mchl_5635 NC_011758.1 257810 258550 R hypothetical protein complement(257810..258550) Methylobacterium extorquens CM4 7119171 YP_002424290.1 CDS Mchl_5636 NC_011758.1 258609 259366 R KEGG: mpo:Mpop_3783 hypothetical protein; hypothetical protein complement(join(258609..259040,259040..259366)) Methylobacterium extorquens CM4 7119172 YP_002424291.1 CDS Mchl_5639 NC_011758.1 259870 261075 D PFAM: major royal jelly protein; KEGG: mrd:Mrad2831_5890 hypothetical protein; major royal jelly protein 259870..261075 Methylobacterium extorquens CM4 7119175 YP_002424292.1 CDS Mchl_5641 NC_011758.1 261916 263193 D PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: oan:Oant_4628 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 261916..263193 Methylobacterium extorquens CM4 7119177 YP_002424293.1 CDS Mchl_5642 NC_011758.1 263326 263610 D PFAM: transposase IS3/IS911 family protein; KEGG: sal:Sala_0416 transposase IS3/IS911; transposase IS3/IS911 family protein 263326..263610 Methylobacterium extorquens CM4 7119178 YP_002424294.1 CDS Mchl_5643 NC_011758.1 263607 264497 D PFAM: integrase; KEGG: gdi:GDI0980 integrase; integrase 263607..264497 Methylobacterium extorquens CM4 7119179 YP_002424295.1 CDS Mchl_5644 NC_011758.1 264707 265096 R PFAM: PilT protein; KEGG: ccr:CC_0841 hypothetical protein; PilT protein complement(264707..265096) Methylobacterium extorquens CM4 7119180 YP_002424296.1 CDS Mchl_5645 NC_011758.1 265089 265388 R TIGRFAM: AbrB family transcriptional regulator; KEGG: gox:GOX2681 hypothetical protein; AbrB family transcriptional regulator complement(265089..265388) Methylobacterium extorquens CM4 7119181 YP_002424297.1 CDS Mchl_5646 NC_011758.1 265577 266638 D PFAM: integrase; KEGG: mrd:Mrad2831_6128 integrase; integrase 265577..266638 Methylobacterium extorquens CM4 7119182 YP_002424298.1 CDS Mchl_5647 NC_011758.1 267083 268171 R TIGRFAM: addiction module antidote protein, HigA family; SMART: helix-turn-helix domain protein; KEGG: rru:Rru_A0006 plasmid maintenance system antidote protein; XRE family transcripitonal regulator complement(267083..268171) Methylobacterium extorquens CM4 7119183 YP_002424299.1 CDS Mchl_5648 NC_011758.1 268467 270011 D KEGG: ccr:CC_2700 hypothetical protein; hypothetical protein 268467..270011 Methylobacterium extorquens CM4 7119184 YP_002424300.1 CDS Mchl_5649 NC_011758.1 270015 270800 D KEGG: ccr:CC_2701 hypothetical protein; hypothetical protein 270015..270800 Methylobacterium extorquens CM4 7119185 YP_002424301.1 CDS Mchl_5650 NC_011758.1 270811 271713 D PFAM: cyclic nucleotide-binding; KEGG: mrd:Mrad2831_6138 cyclic nucleotide-binding; cyclic nucleotide-binding 270811..271713 Methylobacterium extorquens CM4 7119186 YP_002424302.1 CDS Mchl_5651 NC_011758.1 272002 273888 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rpc:RPC_1792 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 272002..273888 Methylobacterium extorquens CM4 7119187 YP_002424303.1 CDS Mchl_5652 NC_011758.1 273901 275142 D KEGG: rpc:RPC_1793 hypothetical protein; hypothetical protein 273901..275142 Methylobacterium extorquens CM4 7119188 YP_002424304.1 CDS Mchl_5653 NC_011758.1 276005 277591 D KEGG: rpb:RPB_3790 hypothetical protein; hypothetical protein 276005..277591 Methylobacterium extorquens CM4 7119189 YP_002424305.1 CDS Mchl_5654 NC_011758.1 277666 279204 D PFAM: integrase; KEGG: acr:Acry_3593 integrase catalytic subunit; integrase 277666..279204 Methylobacterium extorquens CM4 7119190 YP_002424306.1 CDS Mchl_5655 NC_011758.1 279216 279959 D PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; KEGG: nha:Nham_2786 IstB-like ATP-binding protein; IstB domain protein ATP-binding protein 279216..279959 Methylobacterium extorquens CM4 7119191 YP_002424307.1 CDS Mchl_5656 NC_011758.1 280709 282358 D KEGG: gur:Gura_2918 hypothetical protein; hypothetical protein 280709..282358 Methylobacterium extorquens CM4 7119192 YP_002424308.1 CDS Mchl_5657 NC_011758.1 282361 284340 D hypothetical protein 282361..284340 Methylobacterium extorquens CM4 7119193 YP_002424309.1 CDS Mchl_5658 NC_011758.1 284496 285119 D hypothetical protein 284496..285119 Methylobacterium extorquens CM4 7119007 YP_002424310.1 CDS Mchl_5659 NC_011758.1 285217 289176 R KEGG: eca:ECA0413 hypothetical protein; hypothetical protein complement(285217..289176) Methylobacterium extorquens CM4 7119008 YP_002424311.1 CDS Mchl_5660 NC_011758.1 289206 290303 D PFAM: transposase IS4 family protein; KEGG: nha:Nham_1266 transposase, IS4; transposase IS4 family protein 289206..290303 Methylobacterium extorquens CM4 7119009 YP_002424312.1 CDS Mchl_5661 NC_011758.1 290300 290626 D KEGG: met:M446_2802 hypothetical protein; hypothetical protein 290300..290626 Methylobacterium extorquens CM4 7119010 YP_002424313.1 CDS Mchl_5662 NC_011758.1 290920 292248 D KEGG: met:M446_6572 hypothetical protein; hypothetical protein 290920..292248 Methylobacterium extorquens CM4 7119011 YP_002424314.1 CDS Mchl_5663 NC_011758.1 292469 293899 R KEGG: xau:Xaut_1068 hypothetical protein; hypothetical protein complement(292469..293899) Methylobacterium extorquens CM4 7119012 YP_002424315.1 CDS Mchl_5664 NC_011758.1 293913 297461 R PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: pen:PSEEN4433 subtilisin-like serine protease; peptidase S8/S53 subtilisin kexin sedolisin complement(293913..297461) Methylobacterium extorquens CM4 7119013 YP_002424316.1 CDS Mchl_5666 NC_011758.1 297893 299113 R KEGG: bbt:BBta_7549 hypothetical protein; hypothetical protein complement(297893..299113) Methylobacterium extorquens CM4 7119015 YP_002424317.1 CDS Mchl_5667 NC_011758.1 299590 300135 R PFAM: metallophosphoesterase; KEGG: mex:Mext_1922 metallophosphoesterase; metallophosphoesterase complement(299590..300135) Methylobacterium extorquens CM4 7119016 YP_002424318.1 CDS Mchl_5668 NC_011758.1 300224 301273 R KEGG: mpo:Mpop_2589 hypothetical protein; hypothetical protein complement(300224..301273) Methylobacterium extorquens CM4 7119017 YP_002424319.1 CDS Mchl_5669 NC_011758.1 301288 303387 R PFAM: peptidase M41; ATPase AAA central domain protein; SMART: ATPase AAA; KEGG: mrd:Mrad2831_4675 ATPase central domain-containing protein; ATPase AAA complement(301288..303387) Methylobacterium extorquens CM4 7119018 YP_002424320.1 CDS Mchl_5670 NC_011758.1 303448 304467 R KEGG: mpo:Mpop_4063 metallophosphoesterase; metallophosphoesterase complement(303448..304467) Methylobacterium extorquens CM4 7119019 YP_002424321.1 CDS Mchl_5671 NC_011758.1 304546 305034 R KEGG: mpo:Mpop_2594 hypothetical protein; hypothetical protein complement(304546..305034) Methylobacterium extorquens CM4 7119020 YP_002424322.1 CDS Mchl_5672 NC_011758.1 305165 306178 R KEGG: mpo:Mpop_2595 hypothetical protein; hypothetical protein complement(305165..306178) Methylobacterium extorquens CM4 7119021 YP_002424323.1 CDS Mchl_5674 NC_011758.1 306752 309673 R SMART: hypothetical protein; KEGG: sco:SCO5953 hypothetical protein; hypothetical protein complement(306752..309673) Methylobacterium extorquens CM4 7119023 YP_002424324.1 CDS Mchl_5675 NC_011758.1 309770 312754 R SMART: hypothetical protein; pyrrolo-quinoline quinone; KEGG: mmi:MMAR_3405 regulatory protein; pyrrolo-quinoline quinone complement(309770..312754) Methylobacterium extorquens CM4 7119024 YP_002424325.1 CDS Mchl_5676 NC_011758.1 313514 315502 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mpo:Mpop_3807 TonB-dependent receptor plug; TonB-dependent receptor plug 313514..315502 Methylobacterium extorquens CM4 7119025 YP_002424326.1 CDS Mchl_5677 NC_011758.1 315513 316385 D PFAM: periplasmic binding protein; KEGG: mpo:Mpop_3806 periplasmic binding protein; periplasmic binding protein 315513..316385 Methylobacterium extorquens CM4 7119026 YP_002424327.1 CDS Mchl_5678 NC_011758.1 316382 317410 D PFAM: transporter permease; KEGG: mex:Mext_2927 transporter permease; transporter permease 316382..317410 Methylobacterium extorquens CM4 7119027 YP_002424328.1 CDS Mchl_5679 NC_011758.1 317407 318219 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mrd:Mrad2831_6080 ABC transporter; ABC transporter 317407..318219 Methylobacterium extorquens CM4 7119028 YP_002424329.1 CDS Mchl_5680 NC_011758.1 318206 319174 D KEGG: mpo:Mpop_3803 hypothetical protein; hypothetical protein 318206..319174 Methylobacterium extorquens CM4 7119029 YP_002424330.1 CDS Mchl_5681 NC_011758.1 319171 319695 D KEGG: mpo:Mpop_3802 hypothetical protein; hypothetical protein 319171..319695 Methylobacterium extorquens CM4 7119030 YP_002424331.1 CDS Mchl_5682 NC_011758.1 319845 321863 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mrd:Mrad2831_4063 TonB-dependent receptor plug; TonB-dependent receptor plug 319845..321863 Methylobacterium extorquens CM4 7119031 YP_002424332.1 CDS Mchl_5683 NC_011758.1 323442 324728 D PFAM: MOFRL domain protein; KEGG: mex:Mext_2747 hydroxypyruvate reductase; hydroxypyruvate reductase 323442..324728 Methylobacterium extorquens CM4 7119032 YP_002424333.1 CDS Mchl_5685 NC_011758.1 325222 326004 R TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mpo:Mpop_0969 precorrin-4 C11-methyltransferase; precorrin-4 C11-methyltransferase complement(325222..326004) Methylobacterium extorquens CM4 7119034 YP_002424334.1 CDS Mchl_5686 NC_011758.1 326001 326369 R KEGG: mex:Mext_1035 CobE protein; CobE protein complement(326001..326369) Methylobacterium extorquens CM4 7119035 YP_002424335.1 CDS Mchl_5687 NC_011758.1 326366 327607 R KEGG: mrd:Mrad2831_3121 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit complement(326366..327607) Methylobacterium extorquens CM4 7119036 YP_002424336.1 CDS Mchl_5688 NC_011758.1 327636 328388 D KEGG: mrd:Mrad2831_3120 precorrin-6A reductase; TIGRFAM: precorrin-6x reductase; PFAM: precorrin-6x reductase CbiJ/CobK; precorrin-6x reductase 327636..328388 Methylobacterium extorquens CM4 7119037 YP_002424337.1 CDS Mchl_5689 NC_011758.1 328427 329197 R TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: met:M446_2442 precorrin-3B C17-methyltransferase; precorrin-3B C17-methyltransferase complement(328427..329197) Methylobacterium extorquens CM4 7119038 YP_002424338.1 CDS Mchl_5690 NC_011758.1 329194 329961 R TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mpo:Mpop_1433 precorrin-2 C20-methyltransferase; precorrin-2 C20-methyltransferase complement(329194..329961) Methylobacterium extorquens CM4 7119039 YP_002424339.1 CDS Mchl_5691 NC_011758.1 329961 330593 R PFAM: precorrin-8X methylmutase CbiC/CobH; KEGG: mpo:Mpop_1434 precorrin-8X methylmutase; precorrin-8X methylmutase complement(329961..330593) Methylobacterium extorquens CM4 7119040 YP_002424340.1 CDS Mchl_5692 NC_011758.1 330676 331311 R KEGG: mrd:Mrad2831_3114 cobalamin biosynthesis protein CobW; hypothetical protein complement(330676..331311) Methylobacterium extorquens CM4 7119041 YP_002424341.1 CDS Mchl_5693 NC_011758.1 331665 332594 R KEGG: mrd:Mrad2831_1569 hypothetical protein; hypothetical protein complement(331665..332594) Methylobacterium extorquens CM4 7119042 YP_002424342.1 CDS Mchl_5694 NC_011758.1 333494 334726 R KEGG: reu:Reut_A2713 imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; amidohydrolase; imidazolonepropionase complement(333494..334726) Methylobacterium extorquens CM4 7119043 YP_002424343.1 CDS Mchl_5697 NC_011758.1 335161 337014 R TIGRFAM: methyltransferase MtaA/CmuA family; PFAM: uroporphyrinogen decarboxylase (URO-D); methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: mta:Moth_1447 cobalamin B12-binding; methyltransferase MtaA/CmuA family complement(335161..337014) Methylobacterium extorquens CM4 7119046 YP_002424344.1 CDS Mchl_5698 NC_011758.1 337039 338136 R hypothetical protein complement(337039..338136) Methylobacterium extorquens CM4 7119047 YP_002424345.1 CDS Mchl_5699 NC_011758.1 339062 339925 D TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; KEGG: azc:AZC_1492 formyltetrahydrofolate deformylase; formyltetrahydrofolate deformylase 339062..339925 Methylobacterium extorquens CM4 7119048 YP_002424346.1 CDS Mchl_5700 NC_011758.1 340046 340966 D PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: pde:Pden_2614 methenyltetrahydrofolate cyclohydrolase; methenyltetrahydrofolate cyclohydrolase 340046..340966 Methylobacterium extorquens CM4 7119049 YP_002424347.1 CDS Mchl_5701 NC_011758.1 340969 342372 D KEGG: met:M446_0475 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; FolC bifunctional protein 340969..342372 Methylobacterium extorquens CM4 7119050 YP_002424348.1 CDS Mchl_5702 NC_011758.1 342409 343437 D KEGG: ret:RHE_CH02443 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase 342409..343437 Methylobacterium extorquens CM4 7119051 YP_002424349.1 CDS Mchl_5706 NC_011758.1 345064 345654 R KEGG: mpo:Mpop_4062 hypothetical protein; hypothetical protein complement(345064..345654) Methylobacterium extorquens CM4 7119055 YP_002424350.1 CDS Mchl_5707 NC_011758.1 345916 346932 R KEGG: mpo:Mpop_4063 metallophosphoesterase; metallophosphoesterase complement(345916..346932) Methylobacterium extorquens CM4 7119056 YP_002424351.1 CDS Mchl_5708 NC_011758.1 347120 348394 R PFAM: metallophosphoesterase; KEGG: mpo:Mpop_4064 metallophosphoesterase; metallophosphoesterase complement(347120..348394) Methylobacterium extorquens CM4 7119057 YP_002424352.1 CDS Mchl_5709 NC_011758.1 348527 349504 R KEGG: mpo:Mpop_4065 hypothetical protein; hypothetical protein complement(348527..349504) Methylobacterium extorquens CM4 7119058 YP_002424353.1 CDS Mchl_5710 NC_011758.1 349689 350048 D KEGG: mpo:Mpop_2596 transcriptional regulator, XRE family; XRE family transcriptional regulator 349689..350048 Methylobacterium extorquens CM4 7119059 YP_002424354.1 CDS Mchl_5712 NC_011758.1 350477 351928 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mrd:Mrad2831_1242 integral membrane sensor signal transduction histidine kinase; histidine kinase complement(350477..351928) Methylobacterium extorquens CM4 7119061 YP_002424355.1 CDS Mchl_5713 NC_011758.1 351921 352598 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mrd:Mrad2831_1241 two component transcriptional regulator; transcriptional regulator complement(351921..352598) Methylobacterium extorquens CM4 7119062 YP_002424356.1 CDS Mchl_5714 NC_011758.1 352876 354138 D TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: mrd:Mrad2831_1239 RND family efflux transporter MFP subunit; efflux transporter RND family, MFP subunit 352876..354138 Methylobacterium extorquens CM4 7119063 YP_002424357.1 CDS Mchl_5715 NC_011758.1 354143 357280 D TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mrd:Mrad2831_1238 CzcA family heavy metal efflux protein; heavy metal efflux pump, CzcA family 354143..357280 Methylobacterium extorquens CM4 7119064 YP_002424358.1 CDS Mchl_5716 NC_011758.1 357273 357608 D hypothetical protein 357273..357608 Methylobacterium extorquens CM4 7119065 YP_002424359.1 CDS Mchl_5717 NC_011758.1 358452 359561 D PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: azo:azo0308 probable phenylacetic acid degradation NADH oxidoreductase PaaE; oxidoreductase FAD/NAD(P)-binding domain protein 358452..359561 Methylobacterium extorquens CM4 7119066 YP_002424360.1 CDS Mchl_5718 NC_011758.1 359554 360711 D PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: aeh:Mlg_1275 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 359554..360711 Methylobacterium extorquens CM4 7119067 YP_002424361.1 CDS Mchl_5719 NC_011758.1 360898 361890 D KEGG: mmi:MMAR_4261 hypothetical protein; hypothetical protein 360898..361890 Methylobacterium extorquens CM4 7119068 YP_002424362.1 CDS Mchl_5720 NC_011758.1 362249 363580 D PFAM: chemotaxis sensory transducer; KEGG: azc:AZC_0666 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 362249..363580 Methylobacterium extorquens CM4 7119069 YP_002424363.1 CDS Mchl_5721 NC_011758.1 363577 364188 D PFAM: cobalbumin biosynthesis protein; KEGG: mrd:Mrad2831_1469 adenosylcobinamide-phosphate guanylyltransferase; adenosylcobinamide-phosphate guanylyltransferase 363577..364188 Methylobacterium extorquens CM4 7119070 YP_002424364.1 CDS Mchl_5722 NC_011758.1 364185 364787 D KEGG: mrd:Mrad2831_1470 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 364185..364787 Methylobacterium extorquens CM4 7119071 YP_002424365.1 CDS Mchl_5723 NC_011758.1 364822 366276 D TIGRFAM: cobyric acid synthase CobQ; PFAM: cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: mrd:Mrad2831_1471 cobyric acid synthase CobQ; cobyric acid synthase CobQ 364822..366276 Methylobacterium extorquens CM4 7119072 YP_002424366.1 CDS Mchl_5724 NC_011758.1 366284 367276 R TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: mex:Mext_4724 cobalamin biosynthesis protein CobD; cobalamin biosynthesis protein CobD complement(366284..367276) Methylobacterium extorquens CM4 7119073 YP_002424367.1 CDS Mchl_5725 NC_011758.1 367687 368346 R PFAM: regulatory protein MerR; KEGG: afe:Lferr_2140 MerR family transcriptional regulator; MerR family transcriptional regulator complement(367687..368346) Methylobacterium extorquens CM4 7119074 YP_002424368.1 CDS Mchl_5726 NC_011758.1 368508 369470 D PFAM: methylenetetrahydrofolate reductase; KEGG: jan:Jann_1978 metfprotein-like; methylenetetrahydrofolate reductase 368508..369470 Methylobacterium extorquens CM4 7119075 YP_002424369.1 CDS Mchl_5727 NC_011758.1 369704 370639 D Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. MtrH catalyzes the transfer of the methyl group from methyl-tetrahydromethanopterin to the corrinoid prosthetic group of mtrA; tetrahydromethanopterin S-methyltransferase subunit H 369704..370639 Methylobacterium extorquens CM4 7119076 YP_002424370.1 CDS Mchl_5728 NC_011758.1 370636 371772 D KEGG: dsy:DSY1510 hypothetical protein; hypothetical protein 370636..371772 Methylobacterium extorquens CM4 7119077 YP_002424371.1 CDS Mchl_5729 NC_011758.1 371887 372972 R TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; KEGG: met:M446_2454 cobalamin biosynthesis protein CbiD; cobalamin biosynthesis protein CbiD complement(371887..372972) Methylobacterium extorquens CM4 7119078 YP_002424372.1 CDS Mchl_5730 NC_011758.1 372969 374528 R TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: xau:Xaut_5025 aminotransferase class I and II; L-threonine-O-3-phosphate decarboxylase complement(372969..374528) Methylobacterium extorquens CM4 7119079 YP_002424373.1 CDS Mchl_5731 NC_011758.1 375103 375906 D TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pla:Plav_1055 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 375103..375906 Methylobacterium extorquens CM4 7119080 YP_002424374.1 CDS Mchl_5732 NC_011758.1 375948 376655 D TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: smd:Smed_1562 cob(II)yrinic acid a,c-diamide reductase; cob(II)yrinic acid a,c-diamide reductase 375948..376655 Methylobacterium extorquens CM4 7119081 YP_002424375.1 CDS Mchl_5734 NC_011758.1 378297 379097 R KEGG: mrd:Mrad2831_5261 transmembrane anti-sigma factor; transmembrane anti-sigma factor complement(378297..379097) Methylobacterium extorquens CM4 7119083 YP_002424376.1 CDS Mchl_5735 NC_011758.1 379094 379606 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mrd:Mrad2831_5260 ECF subfamily RNA polymerase sigma-24 factor; RNA polymerase, sigma-24 subunit, ECF subfamily complement(379094..379606) Methylobacterium extorquens CM4 7119084 YP_002424377.1 CDS Mchl_5736 NC_011758.1 379803 380201 D PFAM: protein of unknown function DUF305; KEGG: mrd:Mrad2831_5258 hypothetical protein; hypothetical protein 379803..380201 Methylobacterium extorquens CM4 7119085 YP_002424479.1 CDS Mchl_5737 NC_011760.1 105 884 R KEGG: mpo:Mpop_5430 hypothetical protein; hypothetical protein complement(105..884) Methylobacterium extorquens CM4 7119647 YP_002424480.1 CDS Mchl_5738 NC_011760.1 1232 1576 D KEGG: cak:Caul_4863 hypothetical protein; hypothetical protein 1232..1576 Methylobacterium extorquens CM4 7119609 YP_002424481.1 CDS Mchl_5739 NC_011760.1 1580 1993 D KEGG: mpo:Mpop_3482 hypothetical protein; hypothetical protein 1580..1993 Methylobacterium extorquens CM4 7119610 YP_002424482.1 CDS Mchl_5740 NC_011760.1 2105 2536 D KEGG: mrd:Mrad2831_6451 hypothetical protein; hypothetical protein 2105..2536 Methylobacterium extorquens CM4 7119611 YP_002424483.1 CDS Mchl_5741 NC_011760.1 2599 3918 R KEGG: met:M446_5137 flagellin domain-containing protein; flagellin domain-containing protein complement(2599..3918) Methylobacterium extorquens CM4 7119612 YP_002424484.1 CDS Mchl_5742 NC_011760.1 4260 4631 R KEGG: met:M446_5138 flagellar biosynthesis repressor FlbT; flagellar biosynthesis repressor FlbT complement(4260..4631) Methylobacterium extorquens CM4 7119613 YP_002424485.1 CDS Mchl_5744 NC_011760.1 4932 5465 R KEGG: rec:RHECIAT_CH0001128 hypothetical protein; hypothetical protein complement(4932..5465) Methylobacterium extorquens CM4 7119615 YP_002424486.1 CDS Mchl_5745 NC_011760.1 5776 6024 D KEGG: mpo:Mpop_5031 hypothetical protein; hypothetical protein 5776..6024 Methylobacterium extorquens CM4 7119616 YP_002424487.1 CDS Mchl_5746 NC_011760.1 6886 7176 D KEGG: mex:Mext_0496 hypothetical protein; hypothetical protein 6886..7176 Methylobacterium extorquens CM4 7119617 YP_002424488.1 CDS Mchl_5747 NC_011760.1 7337 8467 R KEGG: rle:RL2313 hypothetical protein; hypothetical protein complement(7337..8467) Methylobacterium extorquens CM4 7119618 YP_002424489.1 CDS Mchl_5748 NC_011760.1 8467 8751 R hypothetical protein complement(8467..8751) Methylobacterium extorquens CM4 7119619 YP_002424490.1 CDS Mchl_5749 NC_011760.1 8757 9038 R KEGG: bbt:BBta_1498 hypothetical protein; hypothetical protein complement(8757..9038) Methylobacterium extorquens CM4 7119620 YP_002424491.1 CDS Mchl_5750 NC_011760.1 9143 9445 D KEGG: met:M446_3327 hypothetical protein; hypothetical protein 9143..9445 Methylobacterium extorquens CM4 7119621 YP_002424492.1 CDS Mchl_5751 NC_011760.1 9494 9934 D KEGG: bte:BTH_II2324 1A family penicillin-binding protein; 1A family penicillin-binding protein 9494..9934 Methylobacterium extorquens CM4 7119622 YP_002424493.1 CDS Mchl_5752 NC_011760.1 10015 10551 D hypothetical protein 10015..10551 Methylobacterium extorquens CM4 7119623 YP_002424494.1 CDS Mchl_5753 NC_011760.1 10598 11338 D hypothetical protein 10598..11338 Methylobacterium extorquens CM4 7119624 YP_002424495.1 CDS Mchl_5754 NC_011760.1 11405 11944 D KEGG: kpn:KPN_01966 electron transport complex protein RnfC; hypothetical protein 11405..11944 Methylobacterium extorquens CM4 7119625 YP_002424496.1 CDS Mchl_5755 NC_011760.1 11948 12226 D KEGG: mex:Mext_2448 hypothetical protein; hypothetical protein 11948..12226 Methylobacterium extorquens CM4 7119626 YP_002424497.1 CDS Mchl_5756 NC_011760.1 12221 12379 R KEGG: mpo:Mpop_0877 hypothetical protein; hypothetical protein complement(12221..12379) Methylobacterium extorquens CM4 7119627 YP_002424498.1 CDS Mchl_5757 NC_011760.1 12761 13408 D PFAM: Cobyrinic acid ac-diamide synthase; KEGG: met:M446_3124 cobyrinic acid ac-diamide synthase; Cobyrinic acid ac-diamide synthase 12761..13408 Methylobacterium extorquens CM4 7119628 YP_002424499.1 CDS Mchl_5758 NC_011760.1 13603 13761 D hypothetical protein 13603..13761 Methylobacterium extorquens CM4 7119629 YP_002424500.1 CDS Mchl_5759 NC_011760.1 13772 14074 D hypothetical protein 13772..14074 Methylobacterium extorquens CM4 7119630 YP_002424501.1 CDS Mchl_5760 NC_011760.1 14221 15096 D PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sru:SRU_1506 tyrosine recombinase XerC; integrase family protein 14221..15096 Methylobacterium extorquens CM4 7119631 YP_002424502.1 CDS Mchl_5762 NC_011760.1 16035 17297 R KEGG: mpo:Mpop_1194 conserved hypothetical protein; putative flagellin C-ter domain; conserved hypothetical protein; putative flagellin C-ter domain complement(16035..17297) Methylobacterium extorquens CM4 7119633 YP_002424503.1 CDS Mchl_5763 NC_011760.1 17461 17865 D PFAM: flagellar FlbT family protein; KEGG: met:M446_0687 flagellar FlbT family protein; flagellar FlbT family protein 17461..17865 Methylobacterium extorquens CM4 7119634 YP_002424504.1 CDS Mchl_5764 NC_011760.1 18067 18306 R hypothetical protein complement(18067..18306) Methylobacterium extorquens CM4 7119635 YP_002424505.1 CDS Mchl_5765 NC_011760.1 18303 18500 R hypothetical protein complement(18303..18500) Methylobacterium extorquens CM4 7119636 YP_002424506.1 CDS Mchl_5766 NC_011760.1 18497 18703 R hypothetical protein complement(18497..18703) Methylobacterium extorquens CM4 7119637 YP_002424507.1 CDS Mchl_5767 NC_011760.1 18700 18882 R hypothetical protein complement(18700..18882) Methylobacterium extorquens CM4 7119638 YP_002424508.1 CDS Mchl_5768 NC_011760.1 18866 19108 R hypothetical protein complement(18866..19108) Methylobacterium extorquens CM4 7119639 YP_002424509.1 CDS Mchl_5769 NC_011760.1 19105 19527 R KEGG: met:M446_0803 hypothetical protein; hypothetical protein complement(19105..19527) Methylobacterium extorquens CM4 7119640 YP_002424510.1 CDS Mchl_5770 NC_011760.1 19583 19822 R hypothetical protein complement(19583..19822) Methylobacterium extorquens CM4 7119641 YP_002424511.1 CDS Mchl_5771 NC_011760.1 19819 20070 R KEGG: mex:Mext_1871 hypothetical protein; hypothetical protein complement(19819..20070) Methylobacterium extorquens CM4 7119642 YP_002424512.1 CDS Mchl_5772 NC_011760.1 20113 20448 R KEGG: mrd:Mrad2831_1256 hypothetical protein; hypothetical protein complement(20113..20448) Methylobacterium extorquens CM4 7119643 YP_002424513.1 CDS Mchl_5773 NC_011760.1 20445 20714 R KEGG: met:M446_0800 hypothetical protein; hypothetical protein complement(20445..20714) Methylobacterium extorquens CM4 7119644 YP_002424514.1 CDS Mchl_5774 NC_011760.1 20711 22327 R KEGG: mag:amb0657 hypothetical protein; hypothetical protein complement(20711..22327) Methylobacterium extorquens CM4 7119645 YP_002424515.1 CDS Mchl_5775 NC_011760.1 22383 22610 R hypothetical protein complement(22383..22610) Methylobacterium extorquens CM4 7119646 Mchl_R0001 tRNA Mchl_R0001 NC_011757.1 2 76 R tRNA-Thr complement(2..76) Methylobacterium extorquens CM4 7116303 Mchl_R0002 tRNA Mchl_R0002 NC_011757.1 68537 68622 D tRNA-Tyr 68537..68622 Methylobacterium extorquens CM4 7113993 Mchl_R0003 tRNA Mchl_R0003 NC_011757.1 94720 94805 D tRNA-Tyr 94720..94805 Methylobacterium extorquens CM4 7114027 Mchl_R0004 tRNA Mchl_R0004 NC_011757.1 112742 112818 R tRNA-Met complement(112742..112818) Methylobacterium extorquens CM4 7114043 Mchl_R0005 tRNA Mchl_R0005 NC_011757.1 121619 121693 D tRNA-Glu 121619..121693 Methylobacterium extorquens CM4 7114052 Mchl_R0006 tRNA Mchl_R0006 NC_011757.1 297028 297117 R tRNA-Ser complement(297028..297117) Methylobacterium extorquens CM4 7118617 Mchl_R0007 tRNA Mchl_R0007 NC_011757.1 308227 308301 R tRNA-Val complement(308227..308301) Methylobacterium extorquens CM4 7118627 Mchl_R0008 tRNA Mchl_R0008 NC_011757.1 384032 384124 D tRNA-Ser 384032..384124 Methylobacterium extorquens CM4 7116400 Mchl_R0009 tRNA Mchl_R0009 NC_011757.1 570478 570551 R tRNA-Gly complement(570478..570551) Methylobacterium extorquens CM4 7117819 Mchl_R0010 tRNA Mchl_R0010 NC_011757.1 586158 586234 R tRNA-Met complement(586158..586234) Methylobacterium extorquens CM4 7117838 Mchl_R0013 tRNA Mchl_R0013 NC_011757.1 589706 589781 R tRNA-Ala complement(589706..589781) Methylobacterium extorquens CM4 7117841 Mchl_R0014 tRNA Mchl_R0014 NC_011757.1 589788 589864 R tRNA-Ile complement(589788..589864) Methylobacterium extorquens CM4 7117842 Mchl_R0016 tRNA Mchl_R0016 NC_011757.1 733027 733111 R tRNA-Leu complement(733027..733111) Methylobacterium extorquens CM4 7116590 Mchl_R0017 tRNA Mchl_R0017 NC_011757.1 747743 747832 D tRNA-Ser 747743..747832 Methylobacterium extorquens CM4 7116604 Mchl_R0018 tRNA Mchl_R0018 NC_011757.1 755740 755816 R tRNA-Met complement(755740..755816) Methylobacterium extorquens CM4 7116610 Mchl_R0021 tRNA Mchl_R0021 NC_011757.1 759288 759363 R tRNA-Ala complement(759288..759363) Methylobacterium extorquens CM4 7116613 Mchl_R0022 tRNA Mchl_R0022 NC_011757.1 759370 759446 R tRNA-Ile complement(759370..759446) Methylobacterium extorquens CM4 7116614 Mchl_R0024 tRNA Mchl_R0024 NC_011757.1 778086 778162 R tRNA-Met complement(778086..778162) Methylobacterium extorquens CM4 7115758 Mchl_R0027 tRNA Mchl_R0027 NC_011757.1 781634 781709 R tRNA-Ala complement(781634..781709) Methylobacterium extorquens CM4 7115761 Mchl_R0028 tRNA Mchl_R0028 NC_011757.1 781716 781792 R tRNA-Ile complement(781716..781792) Methylobacterium extorquens CM4 7115762 Mchl_R0030 tRNA Mchl_R0030 NC_011757.1 984801 984876 D tRNA-Glu 984801..984876 Methylobacterium extorquens CM4 7114737 Mchl_R0031 tRNA Mchl_R0031 NC_011757.1 1155445 1155521 R tRNA-Met complement(1155445..1155521) Methylobacterium extorquens CM4 7117267 Mchl_R0034 tRNA Mchl_R0034 NC_011757.1 1158993 1159068 R tRNA-Ala complement(1158993..1159068) Methylobacterium extorquens CM4 7117270 Mchl_R0035 tRNA Mchl_R0035 NC_011757.1 1159075 1159151 R tRNA-Ile complement(1159075..1159151) Methylobacterium extorquens CM4 7117271 Mchl_R0037 tRNA Mchl_R0037 NC_011757.1 1230366 1230442 D tRNA-Asp 1230366..1230442 Methylobacterium extorquens CM4 7117909 Mchl_R0038 tRNA Mchl_R0038 NC_011757.1 1533823 1533899 R tRNA-Arg complement(1533823..1533899) Methylobacterium extorquens CM4 7116695 Mchl_R0039 tRNA Mchl_R0039 NC_011757.1 1635041 1635117 R tRNA-Met complement(1635041..1635117) Methylobacterium extorquens CM4 7115182 Mchl_R0042 tRNA Mchl_R0042 NC_011757.1 1638589 1638664 R tRNA-Ala complement(1638589..1638664) Methylobacterium extorquens CM4 7118595 Mchl_R0043 tRNA Mchl_R0043 NC_011757.1 1638671 1638747 R tRNA-Ile complement(1638671..1638747) Methylobacterium extorquens CM4 7118758 Mchl_R0045 tRNA Mchl_R0045 NC_011757.1 1641826 1641902 D tRNA-Arg 1641826..1641902 Methylobacterium extorquens CM4 7118761 Mchl_R0046 tRNA Mchl_R0046 NC_011757.1 2012017 2012091 D tRNA-Gly 2012017..2012091 Methylobacterium extorquens CM4 7116758 Mchl_R0047 tRNA Mchl_R0047 NC_011757.1 2050556 2050632 D tRNA-Gly 2050556..2050632 Methylobacterium extorquens CM4 7118677 Mchl_R0049 tRNA Mchl_R0049 NC_011757.1 2340917 2340991 D tRNA-Val 2340917..2340991 Methylobacterium extorquens CM4 7114783 Mchl_R0050 tRNA Mchl_R0050 NC_011757.1 2548474 2548549 D tRNA-Thr 2548474..2548549 Methylobacterium extorquens CM4 7113763 Mchl_R0051 tRNA Mchl_R0051 NC_011757.1 2606824 2606910 R tRNA-Leu complement(2606824..2606910) Methylobacterium extorquens CM4 7114465 Mchl_R0053 tRNA Mchl_R0053 NC_011757.1 2812941 2813025 D tRNA-Leu 2812941..2813025 Methylobacterium extorquens CM4 7117428 Mchl_R0054 tRNA Mchl_R0054 NC_011757.1 2819697 2819772 D tRNA-Val 2819697..2819772 Methylobacterium extorquens CM4 7117433 Mchl_R0055 tRNA Mchl_R0055 NC_011757.1 2828879 2828954 D tRNA-Ala 2828879..2828954 Methylobacterium extorquens CM4 7117442 Mchl_R0056 tRNA Mchl_R0056 NC_011757.1 3002385 3002460 R tRNA-Phe complement(3002385..3002460) Methylobacterium extorquens CM4 7115080 Mchl_R0057 tRNA Mchl_R0057 NC_011757.1 3003606 3003681 D tRNA-Thr 3003606..3003681 Methylobacterium extorquens CM4 7115083 Mchl_R0058 tRNA Mchl_R0058 NC_011757.1 3155524 3155605 D tRNA-Tyr 3155524..3155605 Methylobacterium extorquens CM4 7118185 Mchl_R0059 tRNA Mchl_R0059 NC_011757.1 3177327 3177403 R tRNA-His complement(3177327..3177403) Methylobacterium extorquens CM4 7118202 Mchl_R0060 tRNA Mchl_R0060 NC_011757.1 3478474 3478549 D tRNA-Lys 3478474..3478549 Methylobacterium extorquens CM4 7117066 Mchl_R0061 tRNA Mchl_R0061 NC_011757.1 3580575 3580648 D tRNA-Ser 3580575..3580648 Methylobacterium extorquens CM4 7116043 Mchl_R0062 tRNA Mchl_R0062 NC_011757.1 3642060 3642136 D tRNA-Pro 3642060..3642136 Methylobacterium extorquens CM4 7114212 Mchl_R0063 tRNA Mchl_R0063 NC_011757.1 3998208 3998282 D tRNA-Gly 3998208..3998282 Methylobacterium extorquens CM4 7116979 Mchl_R0064 tRNA Mchl_R0064 NC_011757.1 4051427 4051502 R tRNA-Met complement(4051427..4051502) Methylobacterium extorquens CM4 7117036 Mchl_R0065 tRNA Mchl_R0065 NC_011757.1 4177730 4177819 D tRNA-Ser 4177730..4177819 Methylobacterium extorquens CM4 7117169 Mchl_R0066 tRNA Mchl_R0066 NC_011757.1 4297924 4297999 D tRNA-Ala 4297924..4297999 Methylobacterium extorquens CM4 7114383 Mchl_R0067 tRNA Mchl_R0067 NC_011757.1 4418500 4418576 D tRNA-Pro 4418500..4418576 Methylobacterium extorquens CM4 7115318 Mchl_R0068 tRNA Mchl_R0068 NC_011757.1 4418622 4418698 D tRNA-Arg 4418622..4418698 Methylobacterium extorquens CM4 7115319 Mchl_R0069 tRNA Mchl_R0069 NC_011757.1 4606949 4607025 D tRNA-Trp 4606949..4607025 Methylobacterium extorquens CM4 7116528 Mchl_R0070 tRNA Mchl_R0070 NC_011757.1 4854501 4854585 R tRNA-Leu complement(4854501..4854585) Methylobacterium extorquens CM4 7117975 Mchl_R0071 tRNA Mchl_R0071 NC_011757.1 5003234 5003307 D tRNA-Gln 5003234..5003307 Methylobacterium extorquens CM4 7118083 Mchl_R0072 tRNA Mchl_R0072 NC_011757.1 5048681 5048765 D tRNA-Leu 5048681..5048765 Methylobacterium extorquens CM4 7118124 Mchl_R0073 tRNA Mchl_R0073 NC_011757.1 5139095 5139180 R tRNA-Tyr complement(5139095..5139180) Methylobacterium extorquens CM4 7118283 Mchl_R0074 tRNA Mchl_R0074 NC_011757.1 5163248 5163322 D tRNA-Gln 5163248..5163322 Methylobacterium extorquens CM4 7118304 Mchl_R0075 tRNA Mchl_R0075 NC_011757.1 5320360 5320436 D tRNA-Pro 5320360..5320436 Methylobacterium extorquens CM4 7114975 Mchl_R0077 tRNA Mchl_R0077 NC_011757.1 5533718 5533791 R tRNA-Cys complement(5533718..5533791) Methylobacterium extorquens CM4 7116201 Mchl_R0078 tRNA Mchl_R0078 NC_011757.1 5534035 5534110 D tRNA-Asn 5534035..5534110 Methylobacterium extorquens CM4 7116202 Mchl_R0079 tRNA Mchl_R0079 NC_011757.1 5695918 5695993 D tRNA-Lys 5695918..5695993 Methylobacterium extorquens CM4 7118418 Mchl_R0011 rRNA Mchl_R0011 NC_011757.1 586313 586427 R 5S ribosomal RNA complement(586313..586427) Methylobacterium extorquens CM4 7117839 Mchl_R0012 rRNA Mchl_R0012 NC_011757.1 586580 589394 R 23S ribosomal RNA complement(586580..589394) Methylobacterium extorquens CM4 7117840 Mchl_R0015 rRNA Mchl_R0015 NC_011757.1 590074 591546 R 16S ribosomal RNA complement(590074..591546) Methylobacterium extorquens CM4 7117843 Mchl_R0019 rRNA Mchl_R0019 NC_011757.1 755895 756009 R 5S ribosomal RNA complement(755895..756009) Methylobacterium extorquens CM4 7116611 Mchl_R0020 rRNA Mchl_R0020 NC_011757.1 756162 758976 R 23S ribosomal RNA complement(756162..758976) Methylobacterium extorquens CM4 7116612 Mchl_R0023 rRNA Mchl_R0023 NC_011757.1 759656 761128 R 16S ribosomal RNA complement(759656..761128) Methylobacterium extorquens CM4 7116615 Mchl_R0025 rRNA Mchl_R0025 NC_011757.1 778241 778355 R 5S ribosomal RNA complement(778241..778355) Methylobacterium extorquens CM4 7115759 Mchl_R0026 rRNA Mchl_R0026 NC_011757.1 778508 781322 R 23S ribosomal RNA complement(778508..781322) Methylobacterium extorquens CM4 7115760 Mchl_R0029 rRNA Mchl_R0029 NC_011757.1 782002 783474 R 16S ribosomal RNA complement(782002..783474) Methylobacterium extorquens CM4 7115763 Mchl_R0032 rRNA Mchl_R0032 NC_011757.1 1155600 1155714 R 5S ribosomal RNA complement(1155600..1155714) Methylobacterium extorquens CM4 7117268 Mchl_R0033 rRNA Mchl_R0033 NC_011757.1 1155867 1158681 R 23S ribosomal RNA complement(1155867..1158681) Methylobacterium extorquens CM4 7117269 Mchl_R0036 rRNA Mchl_R0036 NC_011757.1 1159361 1160833 R 16S ribosomal RNA complement(1159361..1160833) Methylobacterium extorquens CM4 7117272 Mchl_R0040 rRNA Mchl_R0040 NC_011757.1 1635196 1635310 R 5S ribosomal RNA complement(1635196..1635310) Methylobacterium extorquens CM4 7115183 Mchl_R0041 rRNA Mchl_R0041 NC_011757.1 1635463 1638277 R 23S ribosomal RNA complement(1635463..1638277) Methylobacterium extorquens CM4 7115184 Mchl_R0044 rRNA Mchl_R0044 NC_011757.1 1638957 1640429 R 16S ribosomal RNA complement(1638957..1640429) Methylobacterium extorquens CM4 7118759