-- dump date   	20140619_144450
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_001637501.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
YP_001637502.1	binds the polymerase to DNA and acts as a sliding clamp
YP_001637503.1	KEGG: rpb:RPB_0004 DNA replication and repair protein RecF; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; SMART: AAA ATPase
YP_001637504.1	PFAM: PilT protein domain protein; KEGG: xau:Xaut_4793 PilT protein domain protein
YP_001637505.1	PFAM: Rv0623 family protein transcription factor; KEGG: acr:Acry_3269 Rv0623 family protein transcription factor
YP_001637506.1	KEGG: rru:Rru_A0089 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases
YP_001637509.1	KEGG: acr:Acry_3541 helicase, RecD/TraA family; TIGRFAM: helicase, RecD/TraA family; SMART: Helix-hairpin-helix DNA-binding class 1; AAA ATPase
YP_001637510.1	KEGG: nwi:Nwi_1822 hypothetical protein
YP_001637511.1	KEGG: bra:BRADO2785 phosphoribosylformylglycinamidine synthase II (FGAM synthase II); TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein
YP_001637512.1	PFAM: BolA family protein; KEGG: rpb:RPB_3710 BolA-like protein
YP_001637513.1	TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: ret:RHE_CH02304 glutaredoxin protein
YP_001637514.1	PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pna:Pnap_4563 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001637515.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: mes:Meso_3700 SMP-30/gluconolaconase/LRE-like region
YP_001637517.1	KEGG: rpa:RPA1577 hypothetical protein
YP_001637518.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: pst:PSPTO_2717 sensory box histidine kinase/response regulator
YP_001637519.1	KEGG: bxe:Bxe_B2609 hypothetical protein; PFAM: Circadian clock protein KaiC central region; KaiA binding; SMART: AAA ATPase
YP_001637520.1	KEGG: bxe:Bxe_B2044 hypothetical protein
YP_001637521.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pla:Plav_3507 short-chain dehydrogenase/reductase SDR
YP_001637522.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rle:RL2913 putative GntR family transcriptional regulator
YP_001637523.1	TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: bur:Bcep18194_A4412 hypothetical protein
YP_001637524.1	acyl carrier protein of malonate decarboxylase
YP_001637525.1	The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A
YP_001637526.1	TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: bte:BTH_I2800 malonate decarboxylase, gamma subunit
YP_001637527.1	KEGG: bch:Bcen2424_1273 hypothetical protein
YP_001637528.1	KEGG: bam:Bamb_1152 triphosphoribosyl-dephospho-CoA synthase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; PFAM: triphosphoribosyl-dephospho-CoA protein
YP_001637529.1	KEGG: bte:BTH_I2797 acyl transferase domain protein
YP_001637530.1	TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aav:Aave_4150 general secretion pathway protein D
YP_001637531.1	PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator
YP_001637533.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pmy:Pmen_4447 helix-turn-helix-domain containing protein, AraC type
YP_001637534.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: reh:H16_A1682 D-lactate dehydrogenase
YP_001637535.1	PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: nca:Noca_3421 kojibiose phosphorylase
YP_001637536.1	TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: nha:Nham_0891 YidE/YbjL duplication
YP_001637537.1	PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: ana:all1058 putative trehalose/maltose hydrolase
YP_001637538.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: csc:Csac_0438 beta-phosphoglucomutase family hydrolase
YP_001637539.1	PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: rle:RL0066 putative xylulose-5-phosphate phosphoketolase
YP_001637540.1	KEGG: bja:blr3479 hypothetical protein
YP_001637542.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pmy:Pmen_0268 helix-turn-helix-domain containing protein, AraC type
YP_001637544.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reh:H16_B1002 transcriptional regulator
YP_001637545.1	KEGG: ret:RHE_PD00095 putative insertion sequence transposase protein
YP_001637547.1	KEGG: aba:Acid345_1413 hypothetical protein
YP_001637548.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: aba:Acid345_4738 sulfate transporter
YP_001637549.1	KEGG: bja:blr3479 hypothetical protein
YP_001637550.1	PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_0861 GCN5-related N-acetyltransferase
YP_001637551.1	PFAM: phosphate acetyl/butaryl transferase; KEGG: xau:Xaut_3251 phosphate acetyltransferase
YP_001637552.1	TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: xau:Xaut_3252 acetate kinase
YP_001637553.1	KEGG: xau:Xaut_2306 hypothetical protein
YP_001637554.1	PFAM: transposase IS4 family protein; KEGG: acr:Acry_3208 transposase, IS4 family protein
YP_001637555.1	PFAM: alpha/beta hydrolase fold; KEGG: rpe:RPE_3641 alpha/beta hydrolase fold
YP_001637557.1	PFAM: peptidase M18 aminopeptidase I; peptidase M20; peptidase M42 family protein; KEGG: gsu:GSU2196 hydrolase, putative
YP_001637558.1	PFAM: inositol monophosphatase; KEGG: stp:Strop_0369 inositol monophosphatase
YP_001637559.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpe:RPE_1272 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001637560.1	PFAM: alpha/beta hydrolase fold; KEGG: bcl:ABC0759 hypothetical protein
YP_001637561.1	PFAM: isochorismatase hydrolase; KEGG: bja:blr8041 hypothetical protein
YP_001637562.1	KEGG: hch:HCH_06523 GDSL-lilke lipase/acylhydrolase family protein
YP_001637563.1	KEGG: gur:Gura_2209 hypothetical protein
YP_001637564.1	PFAM: nuclease (SNase domain protein); KEGG: xcb:XC_2149 succinoglycan biosynthesis protein
YP_001637567.1	TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: xau:Xaut_4392 small GTP-binding protein
YP_001637569.1	KEGG: sse:Ssed_4245 hypothetical protein
YP_001637571.1	KEGG: mlo:mlr3136 hypothetical protein
YP_001637572.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bra:BRADO3435 putative transcriptional regulatory protein, Crp/Fnr family
YP_001637573.1	KEGG: rsh:Rsph17029_1334 response regulator receiver protein
YP_001637574.1	KEGG: mlo:mlr2110 hypothetical protein
YP_001637577.1	KEGG: mlo:mlr3136 hypothetical protein
YP_001637579.1	KEGG: mlo:mlr6156 hypothetical protein
YP_001637580.1	PFAM: integrase family protein; KEGG: mag:amb4292 integrase
YP_001637581.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpa:RPA3511 ErfK/YbiS/YcfS/YnhG
YP_001637582.1	PFAM: Sporulation domain protein; Lytic transglycosylase catalytic; KEGG: xau:Xaut_3156 lytic transglycosylase catalytic
YP_001637583.1	KEGG: bbt:BBta_4248 hypothetical protein
YP_001637584.1	KEGG: pcr:Pcryo_1614 hypothetical protein
YP_001637586.1	KEGG: oan:Oant_1526 hypothetical protein
YP_001637587.1	KEGG: bta:513668 similar to collagen, type XXVII, alpha 1
YP_001637588.1	KEGG: rpa:RPA1852 putative transcriptional regulator MucR
YP_001637589.1	KEGG: ccr:CC_0933 transcriptional regulator
YP_001637590.1	PFAM: dienelactone hydrolase; phospholipase/Carboxylesterase; BAAT/Acyl-CoA thioester hydrolase; KEGG: aba:Acid345_1173 dienelactone hydrolase
YP_001637591.1	KEGG: ret:RHE_PB00061 putative cytochrome c class I protein
YP_001637592.1	KEGG: sus:Acid_6905 hypothetical protein
YP_001637593.1	KEGG: smd:Smed_6356 putative cytochrome c oxidase subunit III protein
YP_001637594.1	TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; KEGG: smd:Smed_6355 cytochrome c oxidase subunit I type
YP_001637595.1	TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: smd:Smed_6354 cytochrome c oxidase subunit II
YP_001637596.1	PFAM: cytochrome c class I; KEGG: smd:Smed_6353 cytochrome c class I
YP_001637597.1	SMART: extracellular solute-binding protein family 3; KEGG: smd:Smed_6352 extracellular solute-binding protein family 3
YP_001637598.1	TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: smd:Smed_6351 pyrrolo-quinoline quinone
YP_001637600.1	PFAM: integrase family protein; KEGG: mag:amb3777 hypothetical protein
YP_001637601.1	PFAM: alpha/beta hydrolase fold; KEGG: rpe:RPE_3641 alpha/beta hydrolase fold
YP_001637602.1	KEGG: dra:DR_1067 hypothetical protein
YP_001637603.1	PFAM: lipolytic protein G-D-S-L family; KEGG: xcb:XC_1017 lipase/esterase
YP_001637604.1	PFAM: SNARE associated Golgi protein; KEGG: mms:mma_2302 DedA family protein
YP_001637605.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: rha:RHA1_ro05030 possible phospholipase D alpha
YP_001637606.1	KEGG: rsq:Rsph17025_3559 hypothetical protein
YP_001637607.1	KEGG: rpa:RPA2075 putative signal transduction histidine kinase with GAF and PAS/PAC domains; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001637608.1	PFAM: response regulator receiver; KEGG: rpa:RPA2074 response regulator receiver (CheY-like protein)
YP_001637609.1	KEGG: pla:Plav_0358 signal transduction histidine kinase
YP_001637610.1	PFAM: nuclease (SNase domain protein); KEGG: xcb:XC_2149 succinoglycan biosynthesis protein
YP_001637612.1	TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; PAS fold domain protein; KEGG: aeh:Mlg_1833 PAS/PAC sensor signal transduction histidine kinase
YP_001637613.1	PFAM: BLUF domain protein; KEGG: tel:tll0078 phototaxis regulatory protein PixD
YP_001637614.1	KEGG: gbe:GbCGDNIH1_1778 hypothetical cytosolic protein
YP_001637615.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: rpa:RPA1994 hypothetical protein
YP_001637616.1	KEGG: rle:pRL120640 hypothetical protein
YP_001637618.1	PFAM: integrase family protein; KEGG: ccr:CC_1766 hypothetical protein
YP_001637619.1	KEGG: rsq:Rsph17025_3557 hypothetical protein
YP_001637620.1	PFAM: major facilitator superfamily MFS_1; KEGG: har:HEAR3278 putative oxalate/formate antiporter
YP_001637621.1	KEGG: nwi:Nwi_2917 integrase, catalytic region
YP_001637622.1	KEGG: pst:PSPTO_1490 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001637623.1	PFAM: AMP-dependent synthetase and ligase; KEGG: azo:azo1033 long-chain-fatty-acid-CoA ligase
YP_001637624.1	PFAM: porin; KEGG: xau:Xaut_2469 porin
YP_001637625.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: acr:Acry_0629 alpha/beta hydrolase fold-3 domain protein
YP_001637626.1	KEGG: gox:GOX2659 transposase
YP_001637627.1	KEGG: bam:Bamb_2415 hypothetical protein
YP_001637629.1	PFAM: Hemolysin-type calcium-binding region; KEGG: pde:Pden_2124 hemolysin-type calcium-binding region
YP_001637630.1	PFAM: sigma-70 region 2 domain protein; KEGG: mes:Meso_3107 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001637631.1	PFAM: regulatory protein MarR; KEGG: mxa:MXAN_0654 transcriptional regulator, MarR family
YP_001637633.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: syn:slr0423 rare lipoprotein A
YP_001637634.1	KEGG: ccr:CC_0655 sensory box/GGDEF family protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001637635.1	KEGG: mlo:mll0948 hypothetical protein
YP_001637636.1	PFAM: TadE family protein; KEGG: bch:Bcen2424_6780 TadE family protein
YP_001637639.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bbt:BBta_2906 putative methyl-accepting chemotaxis protein
YP_001637640.1	KEGG: net:Neut_1746 integrase, catalytic region
YP_001637641.1	KEGG: sme:SMa1174 hypothetical protein
YP_001637642.1	KEGG: rpd:RPD_3796 response regulator receiver
YP_001637645.1	KEGG: sse:Ssed_4245 hypothetical protein
YP_001637647.1	TIGRFAM: outer membrane adhesin like proteiin; KEGG: dar:Daro_3199 VCBS
YP_001637648.1	KEGG: rsq:Rsph17025_3559 hypothetical protein
YP_001637651.1	PFAM: helix-turn-helix domain protein; KEGG: bhe:BH02210 transcriptional regulator
YP_001637652.1	PFAM: helix-turn-helix domain protein; KEGG: oan:Oant_0753 transcriptional regulator, XRE family
YP_001637653.1	KEGG: mmr:Mmar10_1499 hypothetical protein
YP_001637654.1	KEGG: aga:AgaP_18389 ENSANGP00000020878
YP_001637656.1	KEGG: pen:PSEEN4266 hypothetical protein
YP_001637657.1	KEGG: mag:amb3683 hypothetical protein
YP_001637659.1	KEGG: mlo:mlr6156 hypothetical protein
YP_001637660.1	PFAM: integrase family protein; KEGG: mag:amb3768 integrase
YP_001637661.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpa:RPA3511 ErfK/YbiS/YcfS/YnhG
YP_001637662.1	PFAM: Sporulation domain protein; Lytic transglycosylase catalytic; KEGG: xau:Xaut_3156 lytic transglycosylase catalytic
YP_001637663.1	KEGG: bbt:BBta_4248 hypothetical protein
YP_001637664.1	KEGG: pcr:Pcryo_1614 hypothetical protein
YP_001637666.1	KEGG: oan:Oant_1526 hypothetical protein
YP_001637667.1	PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator
YP_001637668.1	PFAM: dienelactone hydrolase; phospholipase/Carboxylesterase; BAAT/Acyl-CoA thioester hydrolase; KEGG: aba:Acid345_1173 dienelactone hydrolase
YP_001637669.1	KEGG: rxy:Rxyl_2437 alpha/beta hydrolase fold
YP_001637670.1	KEGG: syn:sll1717 hypothetical protein
YP_001637671.1	KEGG: rle:pRL110095 putative transmembrane protein
YP_001637672.1	PFAM: integrase family protein; KEGG: mag:amb3777 hypothetical protein
YP_001637673.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_001637674.1	PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: xau:Xaut_1692 phosphoribosylanthranilate isomerase
YP_001637675.1	KEGG: xau:Xaut_2218 hypothetical protein
YP_001637676.1	TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: rpb:RPB_0638 integration host factor, beta subunit
YP_001637677.1	TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: rpd:RPD_0193 signal peptide peptidase SppA, 36K type
YP_001637678.1	KEGG: swi:Swit_4010 hypothetical protein
YP_001637679.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
YP_001637680.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: rpa:RPA3364 putative rRNA methylase
YP_001637682.1	PFAM: Pirin domain protein; KEGG: nha:Nham_0009 pirin-like
YP_001637683.1	TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: atc:AGR_C_3111 glutathione-regulated potassium-efflux system protein (K(+)/H(+) antiporter)
YP_001637684.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: bbt:BBta_3390 putative cytochrome c-type biogenesis protein
YP_001637685.1	PFAM: HhH-GPD family protein; KEGG: mmr:Mmar10_1055 HhH-GPD family protein
YP_001637688.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bra:BRADO2559 putative methyl-accepting chemotaxis protein
YP_001637689.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_2425 ABC transporter related
YP_001637690.1	KEGG: sme:SMc00123 hypothetical protein
YP_001637692.1	KEGG: stm:STM4196 putative cytoplasmic protein
YP_001637693.1	KEGG: oan:Oant_0417 hypothetical protein
YP_001637694.1	KEGG: swi:Swit_1135 hypothetical protein
YP_001637695.1	PFAM: glycosyl transferase group 1; KEGG: fal:FRAAL1901 putative glycosyl transferase
YP_001637696.1	PFAM: glycosyl transferase group 1; KEGG: acr:Acry_1363 glycosyl transferase, group 1
YP_001637697.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: glycosyl transferase group 1; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: nmu:Nmul_A2267 sucrose-phosphate phosphatase
YP_001637698.1	KEGG: mgi:Mflv_3876 putative sugar transferase
YP_001637699.1	KEGG: rba:RB4336 hypothetical protein
YP_001637700.1	PFAM: glycosyl transferase family 2; KEGG: rba:RB4337 similar to glycosyl transferase
YP_001637701.1	PFAM: glycosyl transferase group 1; KEGG: rba:RB4333 probable galactosyltransferase
YP_001637702.1	KEGG: ath:AT1G01180 unknown protein
YP_001637703.1	PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bja:bll2340 two-component response regulator
YP_001637704.1	PFAM: ABC transporter related; KEGG: bxe:Bxe_A0918 excinuclease ABC, A subunit
YP_001637705.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bra:BRADO0452 putative bifunctional protein: class I glutamine amidotransferase-like (N-terminal), transcriptional regulator protein AraC/XylS family (C-terminal)
YP_001637706.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbt:BBta_3264 putative oxidoreductase protein
YP_001637707.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: sme:SMa1491 isoquinoline 1-oxidoreductase, alpha subunit
YP_001637708.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bbt:BBta_3261 putative isoquinoline 1-oxidoreductase beta subunit
YP_001637709.1	PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: cff:CFF8240_0914 C4-dicarboxylate transporter/malic acid transport protein
YP_001637710.1	PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bra:BRADO1760 D-3-phosphoglycerate dehydrogenase (PgdH)
YP_001637711.1	PFAM: FAD linked oxidase domain protein; KEGG: xau:Xaut_1614 FAD linked oxidase domain protein
YP_001637712.1	KEGG: nha:Nham_4188 chaperone protein HtpG
YP_001637713.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nha:Nham_4187 4Fe-4S ferredoxin, iron-sulfur binding
YP_001637714.1	PFAM: Polysulphide reductase NrfD; KEGG: nha:Nham_4186 polysulphide reductase, NrfD
YP_001637715.1	KEGG: nha:Nham_4185 hypothetical protein
YP_001637716.1	KEGG: nha:Nham_4184 hypothetical protein
YP_001637717.1	KEGG: nha:Nham_4183 hypothetical protein
YP_001637718.1	KEGG: nha:Nham_4182 hypothetical protein
YP_001637719.1	TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; KEGG: nha:Nham_4180 cytochrome c oxidase, subunit II
YP_001637720.1	KEGG: nha:Nham_4179 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_001637721.1	PFAM: cytochrome c oxidase subunit III; KEGG: nha:Nham_4178 cytochrome c oxidase, subunit III
YP_001637722.1	TIGRFAM: caa(3)-type oxidase, subunit IV; KEGG: noc:Noc_1247 Caa(3)-type oxidase, subunit IV
YP_001637723.1	KEGG: bbt:BBta_p0210 putative insertion element protein
YP_001637725.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bja:bll6484 ECF sigma factor
YP_001637726.1	KEGG: bja:bll6483 hypothetical protein
YP_001637727.1	PFAM: Catalase domain protein; KEGG: bxe:Bxe_B1668 putative catalase
YP_001637728.1	PFAM: cytochrome B561; KEGG: xcb:XC_3994 cytochrome b561
YP_001637729.1	catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
YP_001637730.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: xau:Xaut_3238 K+-transporting ATPase, B subunit
YP_001637731.1	one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex
YP_001637732.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: bbt:BBta_6335 sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation
YP_001637733.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpd:RPD_0666 response regulator receiver
YP_001637734.1	KEGG: gbe:GbCGDNIH1_1600 hypothetical protein
YP_001637735.1	KEGG: rpc:RPC_2525 TRAP transporter solute receptor, TAXI family
YP_001637736.1	KEGG: smd:Smed_3881 hypothetical protein
YP_001637737.1	PFAM: methyltransferase putative; Methyltransferase type 11; Methyltransferase type 12; KEGG: bra:BRADO2072 putative 3-demethylubiquinone-9 3-O-methyltransferase
YP_001637738.1	PFAM: Phosphoglycerate mutase; KEGG: sme:SMb20250 hypothetical protein
YP_001637739.1	PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: sme:SMb20249 myo-inositol-1-phosphate synthase
YP_001637740.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mes:Meso_2774 NAD-dependent epimerase/dehydratase
YP_001637741.1	KEGG: ade:Adeh_1058 hypothetical protein
YP_001637742.1	KEGG: smd:Smed_3891 hypothetical protein
YP_001637743.1	KEGG: rsh:Rsph17029_2169 hypothetical protein
YP_001637744.1	PFAM: glycosyl transferase group 1; KEGG: rsh:Rsph17029_2170 glycosyl transferase, group 1
YP_001637745.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bra:BRADO2067 putative Fe-S oxidoreductase homolog to magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
YP_001637746.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rsp:RSP_0519 NAD-dependent epimerase/dehydratase
YP_001637747.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: ade:Adeh_1060 NAD-dependent epimerase/dehydratase
YP_001637748.1	PFAM: integrase family protein; KEGG: sil:SPO1927 site-specfic recombinase, phage integrase family
YP_001637750.1	PFAM: Prophage CP4-57 regulatory; KEGG: xcv:XCV2219 hypothetical protein
YP_001637752.1	KEGG: noc:Noc_2244 protein of unknown function DUF927
YP_001637755.1	KEGG: sru:SRU_0545 hypothetical protein
YP_001637756.1	KEGG: xau:Xaut_2240 hypothetical protein
YP_001637757.1	KEGG: mag:amb3705 hypothetical protein
YP_001637759.1	PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: rle:RL1925 hypothetical protein
YP_001637760.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: atc:AGR_pAT_642 hypothetical protein
YP_001637761.1	PFAM: helix-turn-helix HxlR type; KEGG: atc:AGR_pAT_641 hypothetical protein
YP_001637763.1	PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: mlo:mlr9024 resolvase / integrase
YP_001637764.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: eba:ebA355 hypothetical protein
YP_001637766.1	KEGG: pde:Pden_1523 putative restriction endonuclease
YP_001637767.1	KEGG: nar:Saro_0354 putative type II DNA modification enzyme
YP_001637768.1	PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases; KEGG: pde:Pden_1526 helicase domain protein
YP_001637769.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; KEGG: gox:GOX1503 probable ATP-dependent helicase Lhr
YP_001637770.1	PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bra:BRADO4634 putative polynucleotide enzyme with nucleotide triphosphate hydrolase domain
YP_001637771.1	PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: xau:Xaut_4189 carboxypeptidase Taq
YP_001637772.1	KEGG: rpe:RPE_0414 molecular chaperone, HSP70 class
YP_001637773.1	KEGG: rpb:RPB_2335 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_001637775.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: xau:Xaut_4762 HAD-superfamily hydrolase, subfamily IA, variant 1
YP_001637776.1	PFAM: ATP12 ATPase; KEGG: rpa:RPA3207 hypothetical protein
YP_001637777.1	PFAM: carboxyl transferase; KEGG: xau:Xaut_4725 carboxyl transferase
YP_001637779.1	PFAM: regulatory protein TetR; KEGG: mlo:mll1406 probable transcriptional regulator
YP_001637780.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_001637781.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mpt:Mpe_A3061 hypothetical protein
YP_001637782.1	KEGG: syw:SYNW2410 hypothetical protein
YP_001637783.1	TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: xau:Xaut_1195 crotonyl-CoA reductase
YP_001637784.1	PFAM: Catalase domain protein; KEGG: rba:RB4376 catalase
YP_001637785.1	KEGG: xau:Xaut_1197 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein
YP_001637786.1	KEGG: mfa:Mfla_1093 hypothetical protein
YP_001637787.1	PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: rle:RL1193 putative short-chain reductase
YP_001637788.1	SMART: regulatory protein ArsR; KEGG: ret:RHE_CH01046 probable transcriptional regulator protein, ArsR family
YP_001637789.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001637791.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
YP_001637792.1	PFAM: peptidase C15 pyroglutamyl peptidase I; KEGG: rpc:RPC_1753 peptidase C15, pyroglutamyl peptidase I
YP_001637793.1	functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins
YP_001637794.1	PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: bja:blr7980 hypothetical protein
YP_001637795.1	KEGG: rle:RL4008 hypothetical protein
YP_001637796.1	PFAM: peptidase S15; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: acr:Acry_0766 peptidase S9, prolyl oligopeptidase active site domain protein
YP_001637797.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mlo:mll7632 hypothetical protein
YP_001637799.1	TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: bja:bll1921 exonuclease subunit SbcD homolog
YP_001637800.1	PFAM: SMC domain protein; KEGG: ade:Adeh_0433 exonuclease SbcC
YP_001637801.1	PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_3273 major facilitator superfamily MFS_1
YP_001637802.1	KEGG: bme:BMEI0183 competence protein F
YP_001637803.1	KEGG: bja:bll8048 hypothetical protein
YP_001637804.1	PFAM: Methyltransferase type 11; KEGG: xau:Xaut_3105 methyltransferase type 11
YP_001637805.1	PFAM: protein of unknown function DUF427; KEGG: bur:Bcep18194_B2068 protein of unknown function DUF427
YP_001637806.1	KEGG: pde:Pden_3092 hypothetical protein
YP_001637807.1	TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: xau:Xaut_2586 NUDIX hydrolase
YP_001637808.1	PFAM: protein of unknown function DUF541; KEGG: mes:Meso_2073 protein of unknown function DUF541
YP_001637809.1	KEGG: rpd:RPD_0111 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ
YP_001637810.1	KEGG: rpa:RPA0494 sensor histidine kinase with PAS/PAC and response regulator receiver domains
YP_001637811.1	PFAM: glutathione peroxidase; KEGG: bra:BRADO3371 putative glutathione peroxidase
YP_001637813.1	KEGG: rpc:RPC_2151 hypothetical protein
YP_001637814.1	proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain
YP_001637815.1	KEGG: mes:Meso_1984 AsmA
YP_001637817.1	PFAM: UvrD/REP helicase; KEGG: rpb:RPB_2023 UvrD/REP helicase
YP_001637818.1	PFAM: PhoH family protein; KEGG: ent:Ent638_1548 PhoH family protein
YP_001637819.1	TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: ppr:PBPRA1295 putative aquaporin Z
YP_001637820.1	PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: rpc:RPC_3293 exonuclease
YP_001637821.1	PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: pla:Plav_0946 (glutamate--ammonia-ligase) adenylyltransferase
YP_001637822.1	KEGG: mlo:mlr0494 hypothetical protein
YP_001637823.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpb:RPB_3441 periplasmic sensor signal transduction histidine kinase
YP_001637824.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpd:RPD_2012 response regulator receiver
YP_001637825.1	PFAM: OsmC family protein; KEGG: mes:Meso_0693 OsmC-like protein
YP_001637826.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO0533 putative sulfonate ABC transporter, ATP binding protein (SsuB/TauB/YcbE-like)
YP_001637827.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_7646 putative sulfonate ABC transporter, permease protein
YP_001637828.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN2025 transporter, LysE family
YP_001637829.1	TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: bra:BRADO0531 putative sulfonate ABC transporter, periplasmic binding protein (SsuA/YcbO-like)
YP_001637830.1	catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein
YP_001637831.1	PFAM: GrpE protein; KEGG: mlo:mll3220 heat shock protein (HSP-70 COFACTOR), grpE
YP_001637832.1	KEGG: rsp:RSP_2764 hypothetical protein
YP_001637833.1	PFAM: protein of unknown function DUF497; KEGG: oan:Oant_1533 protein of unknown function DUF497
YP_001637834.1	PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: nca:Noca_0170 prephenate dehydratase
YP_001637835.1	KEGG: rpe:RPE_3769 3-deoxy-D-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase
YP_001637836.1	PFAM: cytochrome c class I; KEGG: mlo:mll5495 cytochrome c
YP_001637837.1	PFAM: extracellular solute-binding protein family 5; KEGG: nha:Nham_0378 extracellular solute-binding protein, family 5
YP_001637838.1	PFAM: extracellular solute-binding protein family 5; KEGG: rpe:RPE_3766 extracellular solute-binding protein, family 5
YP_001637839.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_0013 binding-protein-dependent transport systems inner membrane component
YP_001637840.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA4388 GCN5-related N-acetyltransferase
YP_001637841.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pla:Plav_3087 AMP-dependent synthetase and ligase
YP_001637842.1	PFAM: glycosyl transferase family 2; KEGG: rpr:RP218 putative glycosyl transferase
YP_001637843.1	PFAM: integrase family protein; KEGG: rpb:RPB_3046 phage integrase
YP_001637844.1	PFAM: flagellin domain protein; KEGG: smd:Smed_0268 flagellin domain protein
YP_001637845.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_3446 ISHne3, transposase
YP_001637846.1	KEGG: ecw:EcE24377A_2232 conserved hypothetical protein TIGR02594
YP_001637849.1	KEGG: xau:Xaut_3728 hypothetical protein
YP_001637851.1	PFAM: Hemolysin-type calcium-binding region; KEGG: ana:alr7304 similar to hlyA
YP_001637853.1	KEGG: rle:RL3520 hypothetical protein
YP_001637854.1	PFAM: peptidase S24 and S26 domain protein; KEGG: pmc:P9515_10191 putative SOS mutagenesis protein UmuD
YP_001637855.1	KEGG: mpt:Mpe_B0052 DNA-directed DNA polymerase
YP_001637856.1	TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-4 domain protein; KEGG: pap:PSPA7_0636 transcriptional regulator, LuxR family
YP_001637857.1	PFAM: CsbD family protein; KEGG: bja:blr1496 hypothetical protein
YP_001637858.1	KEGG: smd:Smed_5683 conserved hypothetical membrane spanning protein
YP_001637859.1	PFAM: CsbD family protein; KEGG: pen:PSEEN4005 hypothetical protein
YP_001637860.1	PFAM: CsbD family protein; KEGG: acr:Acry_2107 CsbD family protein
YP_001637861.1	PFAM: protein of unknown function UPF0187; KEGG: pen:PSEEN4044 hypothetical protein
YP_001637862.1	TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pla:Plav_0407 acetylornithine deacetylase (ArgE)
YP_001637863.1	protein associated with Co2+ and Mg2+ efflux
YP_001637865.1	Catalyzes the deamination of dCTP to form dUTP
YP_001637866.1	KEGG: bra:BRADO1703 putative transport protein, YfdC-like
YP_001637867.1	PFAM: molybdopterin binding domain; KEGG: xau:Xaut_3541 molybdopterin binding domain
YP_001637868.1	PFAM: sugar fermentation stimulation protein; KEGG: xau:Xaut_3100 sugar fermentation stimulation protein
YP_001637869.1	TIGRFAM: methyltransferase FkbM family; KEGG: bbt:BBta_0234 hypothetical protein
YP_001637870.1	PFAM: alpha/beta hydrolase fold; KEGG: xau:Xaut_3209 alpha/beta hydrolase fold
YP_001637872.1	PFAM: ABC-2 type transporter; KEGG: mpt:Mpe_A0977 ABC transporter permease protein
YP_001637873.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr6579 ABC transporter ATP-binding protein
YP_001637874.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mes:Meso_2441 4Fe-4S ferredoxin, iron-sulfur binding
YP_001637875.1	KEGG: smd:Smed_5498 hypothetical protein
YP_001637876.1	KEGG: mes:Meso_2443 hypothetical protein
YP_001637877.1	KEGG: mes:Meso_2444 hypothetical protein
YP_001637878.1	KEGG: mes:Meso_2445 molybdopterin-guanine dinucleotide biosynthesis protein A
YP_001637879.1	KEGG: mes:Meso_2446 hypothetical protein
YP_001637880.1	PFAM: cytoplasmic chaperone TorD family protein; KEGG: mes:Meso_2447 cytoplasmic chaperone TorD
YP_001637881.1	TIGRFAM: formate dehydrogenase region TAT target; KEGG: mes:Meso_2448 twin-arginine translocation pathway signal
YP_001637882.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mes:Meso_2449 twin-arginine translocation pathway signal
YP_001637883.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bja:bll5476 formate dehydrogenase iron-sulfur subunit
YP_001637884.1	TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: mes:Meso_2451 formate dehydrogenase, gamma subunit
YP_001637886.1	KEGG: smd:Smed_5488 hypothetical protein
YP_001637887.1	KEGG: vvy:VVA1400 hypothetical protein
YP_001637888.1	PFAM: regulatory protein TetR; KEGG: azo:azo0243 putative TetR family transcriptional regulator
YP_001637889.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xau:Xaut_1149 efflux transporter, RND family, MFP subunit
YP_001637890.1	PFAM: acriflavin resistance protein; KEGG: xau:Xaut_1148 acriflavin resistance protein
YP_001637891.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: atc:AGR_C_3767 hypothetical protein
YP_001637892.1	Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
YP_001637893.1	KEGG: rpb:RPB_0345 hypothetical protein
YP_001637894.1	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs
YP_001637895.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
YP_001637896.1	KEGG: nha:Nham_0149 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001637897.1	KEGG: rpc:RPC_0322 extracellular ligand-binding receptor
YP_001637898.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: xau:Xaut_0340 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase
YP_001637899.1	PFAM: protein of unknown function UPF0102; KEGG: rpd:RPD_0400 protein of unknown function UPF0102
YP_001637900.1	PFAM: response regulator receiver; KEGG: ccr:CC_3015 response regulator
YP_001637901.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pmy:Pmen_3115 substrate-binding region of ABC-type glycine betaine transport system
YP_001637902.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A2384 binding-protein-dependent transport systems inner membrane component
YP_001637903.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: esa:ESA_01111 hypothetical protein
YP_001637904.1	PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_1255 ErfK/YbiS/YcfS/YnhG
YP_001637905.1	PFAM: Extensin family protein; KEGG: atc:AGR_C_4159 hypothetical protein
YP_001637906.1	PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: rpa:RPA0872 putative peptidyl-dipeptidase
YP_001637907.1	PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: gbe:GbCGDNIH1_0047 formate--tetrahydrofolate ligase
YP_001637908.1	PFAM: Heavy metal transport/detoxification protein; KEGG: vei:Veis_1021 heavy metal transport/detoxification protein
YP_001637909.1	PFAM: EAL domain protein; KEGG: bja:blr7477 hypothetical protein
YP_001637911.1	KEGG: mmr:Mmar10_0609 chemotaxis protein
YP_001637912.1	PFAM: response regulator receiver; KEGG: bja:bll7479 two-component response regulator
YP_001637913.1	TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: rpd:RPD_4040 riboflavin biosynthesis protein RibF
YP_001637914.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: xau:Xaut_4126 glyoxylate reductase
YP_001637915.1	PFAM: protein of unknown function DUF1058; KEGG: xau:Xaut_4125 protein of unknown function DUF1058
YP_001637916.1	PFAM: ferric-uptake regulator; KEGG: xau:Xaut_3845 ferric uptake regulator, Fur family
YP_001637917.1	catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP
YP_001637918.1	FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_001637919.1	KEGG: xau:Xaut_0052 short-chain dehydrogenase/reductase SDR
YP_001637920.1	KEGG: nha:Nham_1390 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein
YP_001637921.1	PFAM: DoxX family protein; KEGG: mes:Meso_0934 DoxX
YP_001637922.1	KEGG: nwi:Nwi_1127 tetratricopeptide TPR_4 protein
YP_001637924.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: rpa:RPA1570 putative aminopeptidase
YP_001637925.1	PFAM: ROSMUCR transcriptional regulator; KEGG: rpc:RPC_1774 transcriptional regulator, MucR family
YP_001637927.1	KEGG: rpe:RPE_1869 hypothetical protein
YP_001637928.1	PFAM: Fe-S metabolism associated SufE; KEGG: bja:bll3069 hypothetical protein
YP_001637929.1	KEGG: dvu:DVU0449 sensor/response regulator; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein
YP_001637930.1	KEGG: nha:Nham_0235 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001637931.1	KEGG: pla:Plav_0358 signal transduction histidine kinase
YP_001637933.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: csa:Csal_0685 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001637934.1	KEGG: bbt:BBta_p0210 putative insertion element protein
YP_001637935.1	PFAM: transposase IS3/IS911 family protein; KEGG: bbt:BBta_p0209 putative transposase IS3/IS911 family
YP_001637936.1	KEGG: nwi:Nwi_2918 integrase, catalytic region
YP_001637938.1	PFAM: protein of unknown function DUF1003; KEGG: swi:Swit_4796 protein of unknown function DUF1003
YP_001637940.1	KEGG: ecw:EcE24377A_2232 conserved hypothetical protein TIGR02594
YP_001637943.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: syn:slr0423 rare lipoprotein A
YP_001637944.1	PFAM: protein of unknown function DUF1236; KEGG: mmu:100041170 similar to loricrin
YP_001637947.1	KEGG: cel:C18D11.9 C18D11.9
YP_001637949.1	PFAM: protein of unknown function DUF1236; KEGG: nha:Nham_0234 hypothetical protein
YP_001637950.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mes:Meso_3107 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001637951.1	PFAM: response regulator receiver; KEGG: rle:RL3611 putative two-component response regulator transcriptional regulatory protein
YP_001637952.1	PFAM: Ion transport 2 domain protein; KEGG: maq:Maqu_0775 ion transport 2 domain protein
YP_001637953.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mes:Meso_4540 transcriptional regulator, LysR family
YP_001637954.1	PFAM: sodium:dicarboxylate symporter; KEGG: pfo:Pfl_2773 sodium:dicarboxylate symporter
YP_001637955.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bja:bll6730 hypothetical protein
YP_001637956.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bra:BRADO4306 putative glyoxalase
YP_001637957.1	KEGG: ppf:Pput_4013 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001637960.1	KEGG: rde:RD1_2486 hypothetical protein
YP_001637962.1	KEGG: bja:bll8089 hypothetical protein
YP_001637965.1	PFAM: integrase family protein; KEGG: xfa:XF0678 phage-related integrase
YP_001637967.1	PFAM: regulatory protein MerR; KEGG: sal:Sala_2558 transcriptional regulator, MerR family
YP_001637968.1	PFAM: TM2 domain containing protein?; KEGG: cyb:CYB_1650 TM2 domain protein
YP_001637969.1	PFAM: Integrase catalytic region; Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: nwi:Nwi_2917 integrase, catalytic region
YP_001637971.1	PFAM: ribonuclease H; KEGG: rfr:Rfer_1464 ribonuclease H
YP_001637972.1	KEGG: kpn:KPN_pKPN5p08190 hypothetical protein
YP_001637973.1	PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: rso:RSc0805 hypothetical protein
YP_001637974.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc0804 probable transcription regulator protein
YP_001637975.1	KEGG: reh:H16_B2110 multimeric flavodoxin
YP_001637977.1	PFAM: UspA domain protein; KEGG: rpc:RPC_4049 hypothetical protein
YP_001637979.1	KEGG: pla:Plav_0358 signal transduction histidine kinase
YP_001637980.1	KEGG: nha:Nham_1250 phasin 2
YP_001637982.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: azo:azo2649 GGDEF family protein
YP_001637985.1	KEGG: rle:RL3648 putative galactosyl transferase
YP_001637986.1	KEGG: sil:SPO2649 hypothetical protein
YP_001637987.1	KEGG: smd:Smed_3881 hypothetical protein
YP_001637988.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bra:BRADO2072 putative 3-demethylubiquinone-9 3-O-methyltransferase
YP_001637989.1	PFAM: Phosphoglycerate mutase; KEGG: sme:SMb20250 hypothetical protein
YP_001637990.1	PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: mes:Meso_2694 myo-inositol-1-phosphate synthase
YP_001637991.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mes:Meso_2774 NAD-dependent epimerase/dehydratase
YP_001637992.1	KEGG: ade:Adeh_1058 hypothetical protein
YP_001637993.1	KEGG: mes:Meso_2776 hypothetical protein
YP_001637994.1	KEGG: rsq:Rsph17025_2428 hypothetical protein
YP_001637995.1	PFAM: glycosyl transferase group 1; KEGG: rsq:Rsph17025_2429 glycosyl transferase, group 1
YP_001637996.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bra:BRADO2067 putative Fe-S oxidoreductase homolog to magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
YP_001637997.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ret:RHE_PB00053 probable nucleoside diphosphate epimerase protein
YP_001637998.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: afw:Anae109_3216 NAD-dependent epimerase/dehydratase
YP_001637999.1	KEGG: sco:SCO0647 short chain oxidoreductase
YP_001638000.1	KEGG: rle:RL1211 hypothetical protein
YP_001638001.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: ret:RHE_CH02415 putative cytochrome biogenesis protein
YP_001638002.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pfo:Pfl_2086 two component transcriptional regulator, winged helix family
YP_001638003.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: reu:Reut_B3910 ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal
YP_001638004.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_CH01180 probable ABC transporter, ATP-binding protein
YP_001638005.1	PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_1119 putative hydrolase, alpha/beta fold family
YP_001638006.1	KEGG: pfo:Pfl_2256 putative cytochrome P460
YP_001638007.1	PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sme:SMc00621 adenylate cyclase 2 protein
YP_001638009.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rme:Rmet_1715 transcriptional regulator, AraC family
YP_001638010.1	KEGG: rpe:RPE_1623 hypothetical protein
YP_001638012.1	PFAM: sulfatase; KEGG: bja:bll5074 putative arylsulfatase
YP_001638013.1	PFAM: protein of unknown function DUF323; KEGG: bja:bll4742 hypothetical protein
YP_001638014.1	KEGG: rpa:RPA3746 possible RND superfamily transporter
YP_001638015.1	KEGG: rpc:RPC_1715 hypothetical protein
YP_001638016.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pfo:Pfl_2761 transcriptional regulator, AraC family
YP_001638017.1	KEGG: xau:Xaut_3413 hypothetical protein
YP_001638019.1	KEGG: mlo:mlr5309 Na+/H+ antiporter
YP_001638020.1	KEGG: rpd:RPD_2417 hypothetical protein
YP_001638021.1	KEGG: bbt:BBta_p0210 putative insertion element protein
YP_001638023.1	PFAM: peptidase M23B; KEGG: xau:Xaut_1905 peptidase M23B
YP_001638025.1	KEGG: hch:HCH_04570 transposase and inactivated derivatives
YP_001638026.1	KEGG: sma:SAV494 hypothetical protein
YP_001638027.1	KEGG: bra:BRADO2970 hypothetical protein
YP_001638028.1	TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: xau:Xaut_4749 aminopeptidase N
YP_001638029.1	KEGG: xau:Xaut_1626 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001638030.1	TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: smd:Smed_2891 arginase
YP_001638031.1	KEGG: gbe:GbCGDNIH1_0798 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase
YP_001638034.1	PFAM: CutA1 divalent ion tolerance protein; KEGG: pla:Plav_2702 CutA1 divalent ion tolerance protein
YP_001638035.1	PFAM: ATP-NAD/AcoX kinase; KEGG: xau:Xaut_1643 NAD(+) kinase
YP_001638036.1	PFAM: protein of unknown function DUF1674; KEGG: rpe:RPE_0029 protein of unknown function DUF1674
YP_001638037.1	PFAM: Fmu (Sun) domain protein; methyltransferase small; Methyltransferase type 11; KEGG: xau:Xaut_0038 sun protein
YP_001638039.1	KEGG: bja:blr1554 hypothetical protein
YP_001638040.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III; KEGG: mxa:MXAN_2571 aminotransferase, class II
YP_001638042.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: rpb:RPB_2466 malonyl CoA-acyl carrier protein transacylase
YP_001638043.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: pla:Plav_3359 3-oxoacyl-(acyl-carrier-protein) reductase
YP_001638044.1	carries the fatty acid chain in fatty acid biosynthesis
YP_001638045.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: rpa:RPA3072 3-oxoacyl-acyl carrier protein synthase II
YP_001638046.1	PFAM: aminodeoxychorismate lyase; KEGG: nha:Nham_2350 aminodeoxychorismate lyase
YP_001638047.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: csc:Csac_0438 beta-phosphoglucomutase family hydrolase
YP_001638048.1	PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: nca:Noca_3421 kojibiose phosphorylase
YP_001638049.1	TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: sme:SMb21184 putative acetate kinase (acetokinase) protein
YP_001638050.1	PFAM: secretion protein HlyD family protein; KEGG: rpa:RPA0681 membrane permeases, predicted cation efflux pump
YP_001638051.1	PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: rpa:RPA0682 possible ABC transporter ATP-binding component, membrane bound
YP_001638052.1	PFAM: ABC-2 type transporter; KEGG: rle:pRL90045 putative ABC transporter permease component
YP_001638053.1	PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: bja:bll2518 putative phosphoketolase
YP_001638054.1	PFAM: monooxygenase FAD-binding; KEGG: stp:Strop_2657 monooxygenase, FAD-binding
YP_001638055.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: xau:Xaut_4408 ABC transporter related
YP_001638056.1	PFAM: extracellular solute-binding protein family 1; KEGG: bov:BOV_A0655 putative iron compound ABC transporter, periplasmic iron compound-binding protein
YP_001638057.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_4446 binding-protein-dependent transport systems inner membrane component
YP_001638059.1	PFAM: protein of unknown function DUF540; KEGG: bmb:BruAb1_0163 hypothetical protein
YP_001638060.1	PFAM: Kelch repeat-containing protein; Kelch repeat protein; KEGG: noc:Noc_0230 hypothetical protein
YP_001638061.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bja:blr0703 hypothetical protein
YP_001638062.1	PFAM: cyclic nucleotide-binding; KEGG: rpb:RPB_1692 cyclic nucleotide-binding domain (cNMP-BD) protein
YP_001638063.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: acr:Acry_2974 cupin 2, conserved barrel domain protein
YP_001638066.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_4544 sulfate ABC transporter, periplasmic sulfate-binding protein
YP_001638067.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00258 probable sulfate uptake ABC transporter, permease protein
YP_001638068.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0109 sulfate ABC transporter, permease protein
YP_001638069.1	KEGG: mlo:mlr1669 ATP-binding protein of sulfate ABC transporter; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001638070.1	KEGG: bbt:BBta_0200 putative membrane protein of unknown function
YP_001638071.1	KEGG: rru:Rru_A0153 endonuclease III/Nth; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein
YP_001638072.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_001638073.1	PFAM: glycosyl transferase family 2; KEGG: mca:MCA0620 glycosyl transferase, group 2 family protein
YP_001638074.1	PFAM: glycosyl transferase family 2; KEGG: gbe:GbCGDNIH1_0744 glycosyltransferase
YP_001638075.1	KEGG: xau:Xaut_2202 hypothetical protein
YP_001638076.1	PFAM: Invasion associated locus B family protein; KEGG: xau:Xaut_4649 invasion associated locus B family protein
YP_001638078.1	PFAM: protein of unknown function DUF45; KEGG: nwi:Nwi_0131 protein of unknown function DUF45
YP_001638079.1	TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mlo:mll4552 intracellular PHB depolymerase
YP_001638080.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mlo:mlr5307 two-component, sensor histidine protein kinase
YP_001638081.1	PFAM: response regulator receiver; KEGG: bov:BOV_0131 DNA-binding response regulator
YP_001638082.1	KEGG: xau:Xaut_0190 putative exported protein of unknown function
YP_001638083.1	TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: nha:Nham_1634 phosphoribosylformylglycinamidine synthetase PurS
YP_001638084.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_001638085.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
YP_001638086.1	PFAM: inositol monophosphatase; KEGG: nwi:Nwi_2740 inositol monophosphatase
YP_001638087.1	PFAM: thiamine monophosphate synthase; KEGG: xau:Xaut_2226 thiamine monophosphate synthase
YP_001638088.1	PFAM: thiazole biosynthesis family protein; KEGG: xau:Xaut_2225 thiazole biosynthesis family protein
YP_001638089.1	TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: xau:Xaut_2224 thiamine biosynthesis protein ThiS
YP_001638090.1	TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: xau:Xaut_2223 glycine oxidase ThiO
YP_001638091.1	PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: smd:Smed_4273 putative adenylate/guanylate cyclase
YP_001638092.1	KEGG: mag:amb3555 hypothetical protein
YP_001638093.1	SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMc00479 putative transcription regulator protein
YP_001638094.1	PFAM: major facilitator superfamily MFS_1; KEGG: swi:Swit_3077 major facilitator superfamily MFS_1
YP_001638095.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria
YP_001638096.1	synthesizes RNA primers at the replication forks
YP_001638097.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: atc:AGR_L_1647 possible gluconolactonase precursor
YP_001638098.1	KEGG: psb:Psyr_2718 major royal jelly protein
YP_001638099.1	KEGG: rpa:RPA1278 GatB/YqeY
YP_001638100.1	TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: xau:Xaut_1243 carbamoyl-phosphate synthase, small subunit
YP_001638103.1	with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella
YP_001638104.1	with FlgF and B makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_001638105.1	PFAM: flagellar hook-basal body complex protein FliE; KEGG: sme:SMc03029 flagellar hook-basal body complex protein
YP_001638106.1	makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_001638107.1	KEGG: oan:Oant_4208 FlgA, flagellar basal-body P-ring formation protein
YP_001638108.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella
YP_001638109.1	KEGG: rpe:RPE_1161 hypothetical protein
YP_001638110.1	PFAM: flagellar L-ring protein; KEGG: bja:bll6869 flagellar L-ring protein precursor
YP_001638111.1	PFAM: flagellar basal body-associated protein FliL; KEGG: rpe:RPE_1163 flagellar basal body-associated protein FliL
YP_001638112.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagellum
YP_001638114.1	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_001638115.1	KEGG: bja:bll6863 hypothetical protein
YP_001638116.1	PFAM: OmpA/MotB domain protein; KEGG: bja:bll6862 probable flagellar motor protein
YP_001638117.1	a periplasmic protein that interacts with and stabilizes MotB; in Rhizobium, interactions between MotB and MotC at the periplasmic surface of the motor control the energy flux or the energy coupling that drives flagellar rotation
YP_001638118.1	KEGG: lma:LmjF35.0290 hypothetical protein, conserved
YP_001638119.1	PFAM: Lytic transglycosylase catalytic; KEGG: sme:SMc03045 hypothetical protein
YP_001638120.1	PFAM: transcriptional regulator domain protein; KEGG: mlo:mlr2935 two-component response regulator
YP_001638121.1	KEGG: ret:RHE_CH00649 hypothetical protein
YP_001638122.1	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella
YP_001638123.1	PFAM: flagellar motor switch protein FliG; KEGG: rpe:RPE_1153 flagellar motor switch protein FliG
YP_001638124.1	TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bja:bll6879 probable flagellar motor switch protein
YP_001638125.1	KEGG: rpe:RPE_1876 hypothetical protein
YP_001638127.1	PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: rpc:RPC_1089 flagellar motor switch protein FliM
YP_001638128.1	KEGG: oan:Oant_4217 chemotaxis MotA protein
YP_001638129.1	heat shock protein involved in degradation of misfolded proteins
YP_001638130.1	heat shock protein involved in degradation of misfolded proteins
YP_001638131.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: rme:Rmet_4814 protein of unknown function DUF6, transmembrane
YP_001638132.1	KEGG: atc:AGR_C_4888 hypothetical protein
YP_001638133.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: tel:tll1694 Rieske 2Fe-2S family protein
YP_001638135.1	KEGG: mmr:Mmar10_1580 hypothetical protein
YP_001638136.1	KEGG: rpd:RPD_0510 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_001638137.1	TIGRFAM: chorismate mutase; PFAM: Chorismate mutase; KEGG: gox:GOX2001 chorismate mutase
YP_001638138.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
YP_001638139.1	Essential for efficient processing of 16S rRNA
YP_001638140.1	KEGG: rpb:RPB_1999 hypothetical protein
YP_001638141.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bja:bll4992 hypothetical protein
YP_001638143.1	KEGG: xau:Xaut_2511 tRNA (guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase
YP_001638144.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate
YP_001638145.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_001638147.1	KEGG: rru:Rru_A0360 methylthioribose-1-phosphate isomerase; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related
YP_001638148.1	KEGG: rsh:Rsph17029_3080 putative DNA-binding protein
YP_001638149.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mes:Meso_1298 MATE efflux family protein
YP_001638150.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pap:PSPA7_1898 probable ATP-binding/permease fusion ABC transporter
YP_001638151.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: sme:SMc00184 putative tRNA/rRNA methyltransferase protein
YP_001638152.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bra:BRADO2559 putative methyl-accepting chemotaxis protein
YP_001638153.1	PFAM: PspA/IM30 family protein; KEGG: rle:RL3579 putative phage-related protein
YP_001638154.1	PFAM: protein of unknown function DUF1449; KEGG: rle:RL3580 putative transmembrane protein
YP_001638155.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bbr:BB1785 putative ferrisiderophore receptor
YP_001638156.1	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis
YP_001638157.1	KEGG: bra:BRADO5919 conserved hypothetical protein; putative deoxyribonuclease
YP_001638158.1	KEGG: sen:SACE_4319 aspartate aminotransferase
YP_001638159.1	PFAM: transcriptional regulator domain protein; KEGG: mlo:mlr2935 two-component response regulator
YP_001638160.1	PFAM: flagellin domain protein; KEGG: rpc:RPC_1104 flagellin-like
YP_001638161.1	PFAM: type IV pilus assembly PilZ; KEGG: bbt:BBta_7466 hypothetical protein
YP_001638162.1	KEGG: bja:bll7264 hypothetical protein
YP_001638163.1	PFAM: protein of unknown function DUF1217; KEGG: oan:Oant_4216 protein of unknown function DUF1217
YP_001638164.1	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rpe:RPE_1147 flagellar basal body rod protein
YP_001638165.1	involved in type III protein export during flagellum assembly
YP_001638166.1	the hook connects flagellar basal body to the flagellar filament
YP_001638167.1	with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook
YP_001638168.1	with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella
YP_001638169.1	acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_001638170.1	post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_001638171.1	acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_001638172.1	FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum
YP_001638173.1	membrane protein involved in the flagellar export apparatus
YP_001638174.1	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium has one thick and several thin flagella; the Bradyrhizobium protein in this cluster are associated with the thin flagella
YP_001638175.1	KEGG: she:Shewmr4_3774 signal recognition particle-docking protein FtsY
YP_001638176.1	KEGG: bja:bll6849 hypothetical protein
YP_001638177.1	KEGG: rpe:RPE_1183 hypothetical protein
YP_001638178.1	KEGG: rpe:RPE_1184 hypothetical protein
YP_001638179.1	PFAM: dihydrodipicolinate synthetase; KEGG: smd:Smed_4167 dihydrodipicolinate synthetase
YP_001638180.1	KEGG: bbt:BBta_3048 hypothetical protein
YP_001638181.1	PFAM: protein of unknown function DUF1491; KEGG: bja:blr3074 hypothetical protein
YP_001638182.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bra:BRADO2709 conserved hypothetical protein; putative peptidoglycan-binding domain-containing protein
YP_001638183.1	KEGG: rpb:RPB_3515 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_001638185.1	TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: smd:Smed_0170 cytochrome d ubiquinol oxidase, subunit II
YP_001638186.1	PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_2920 major facilitator superfamily MFS_1 transporter
YP_001638187.1	PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_1704 major facilitator superfamily MFS_1
YP_001638188.1	PFAM: helix-turn-helix HxlR type; KEGG: sbl:Sbal_1705 transcriptional regulator, HxlR family
YP_001638189.1	KEGG: rru:Rru_A2520 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_001638190.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bra:BRADO2559 putative methyl-accepting chemotaxis protein
YP_001638191.1	Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile
YP_001638192.1	PFAM: protein of unknown function UPF0066; KEGG: xau:Xaut_4390 protein of unknown function UPF0066
YP_001638193.1	KEGG: rpc:RPC_3454 hypothetical protein
YP_001638194.1	PFAM: protein of unknown function DUF201; KEGG: mca:MCA0146 hypothetical protein
YP_001638195.1	PFAM: Protein of unknown function DUF1810; KEGG: mav:MAV_2841 hypothetical protein
YP_001638196.1	PFAM: histone deacetylase superfamily; KEGG: ccr:CC_3648 histone deacetylase family protein
YP_001638197.1	KEGG: mlo:mlr5650 ceramide glucosyltransferase
YP_001638198.1	KEGG: ccr:CC_3699 hypothetical protein
YP_001638201.1	TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: gbe:GbCGDNIH1_1893 ethanolamine permease
YP_001638202.1	PFAM: fatty acid desaturase; KEGG: ret:RHE_CH00426 probable fatty acid desaturase protein
YP_001638203.1	PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: xcv:XCV2949 putative transcriptional regulator, ArsR family
YP_001638204.1	PFAM: glutamine amidotransferase class-I; KEGG: ccr:CC_0409 glutamine amidotransferase, class-I family protein
YP_001638205.1	PFAM: aldo/keto reductase; KEGG: rsh:Rsph17029_3940 aldo/keto reductase
YP_001638206.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: pde:Pden_3330 AraC-type transcriptional regulator domain protein
YP_001638207.1	PFAM: monooxygenase FAD-binding; KEGG: xac:XAC1667 oxidoreductase
YP_001638208.1	KEGG: xau:Xaut_0479 DedA family
YP_001638209.1	PFAM: Disulphide bond formation protein DsbB; KEGG: atc:AGR_L_2587 hypothetical protein
YP_001638210.1	PFAM: Putative ParB-like nuclease; KEGG: bbt:BBta_3524 hypothetical protein
YP_001638211.1	PFAM: acyltransferase 3; KEGG: mes:Meso_0084 acyltransferase 3
YP_001638212.1	PFAM: protein of unknown function DUF55; KEGG: xau:Xaut_1108 protein of unknown function DUF55
YP_001638213.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
YP_001638214.1	KEGG: mmr:Mmar10_2039 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001638215.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_001638216.1	KEGG: xau:Xaut_1159 uroporphyrinogen III synthase HEM4
YP_001638217.1	KEGG: lma:LmjF35.0520 proteophosphoglycan ppg4
YP_001638218.1	PFAM: HemY domain protein; KEGG: bbt:BBta_0286 putative exported protein of unknown function with HemY domain (porphyrin biosynthesis)
YP_001638219.1	KEGG: ccr:CC_0423 hypothetical protein
YP_001638220.1	KEGG: mlo:mlr1763 hypothetical protein
YP_001638223.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
YP_001638224.1	TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: rpd:RPD_4127 chaperonin GroEL
YP_001638225.1	KEGG: acr:Acry_3273 helicase, RecD/TraA family
YP_001638226.1	PFAM: protein of unknown function DUF955; KEGG: bbt:BBta_p0024 hypothetical protein
YP_001638228.1	PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: xau:Xaut_4606 plasmid pRiA4b ORF-3 family protein
YP_001638229.1	PFAM: protein of unknown function DUF262; KEGG: har:HEAR0699 hypothetical protein
YP_001638230.1	PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: swi:Swit_5066 resolvase, N-terminal domain
YP_001638231.1	PFAM: alpha/beta hydrolase fold; KEGG: mms:mma_1873 carboxyl esterase, a/b hydrolase
YP_001638232.1	KEGG: bbt:BBta_1727 hypothetical protein
YP_001638233.1	KEGG: pau:PA14_15710 hypothetical protein
YP_001638234.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: mag:amb2664 hypothetical protein
YP_001638235.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bra:BRADO3399 putative sensor histidine kinase with two PAS and a response regulator receiver domains
YP_001638236.1	KEGG: swi:Swit_3326 hypothetical protein
YP_001638237.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_3647 transcriptional regulator, LysR family
YP_001638238.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll2747 3-oxoacyl-[acyl-carrier-protein] reductase
YP_001638239.1	PFAM: beta-lactamase domain protein; KEGG: gbe:GbCGDNIH1_1166 metal-dependent hydrolase
YP_001638240.1	PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: mlo:mlr3059 hypothetical protein
YP_001638241.1	PFAM: luciferase family protein; KEGG: psb:Psyr_3064 luciferase
YP_001638243.1	KEGG: pla:Plav_0324 hypothetical protein
YP_001638244.1	KEGG: xau:Xaut_2240 hypothetical protein
YP_001638245.1	PFAM: transposase IS4 family protein; KEGG: acr:Acry_3208 transposase, IS4 family protein
YP_001638248.1	PFAM: HNH endonuclease; KEGG: mlo:msr8735 hypothetical protein
YP_001638250.1	PFAM: transposase IS4 family protein; KEGG: gbe:GbCGDNIH1_1045 transposase
YP_001638251.1	KEGG: gox:GOX2659 transposase
YP_001638252.1	KEGG: reh:H16_A2132 hydroxypyruvate reductase
YP_001638253.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bra:BRADO3435 putative transcriptional regulatory protein, Crp/Fnr family
YP_001638254.1	PFAM: response regulator receiver; KEGG: rpa:RPA2074 response regulator receiver (CheY-like protein)
YP_001638255.1	KEGG: rpd:RPD_2136 hypothetical protein
YP_001638256.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nar:Saro_0439 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001638258.1	PFAM: cytochrome P450; KEGG: bha:BH0579 cytochrome P450 hydroxylase
YP_001638259.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: mlo:mll0364 hypothetical protein
YP_001638263.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bra:BRADO3435 putative transcriptional regulatory protein, Crp/Fnr family
YP_001638264.1	KEGG: mlo:mlr2110 hypothetical protein
YP_001638268.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: mlo:mlr2110 hypothetical protein
YP_001638269.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: mlo:mlr2110 hypothetical protein
YP_001638270.1	KEGG: atc:AGR_pAT_694 hypothetical protein
YP_001638271.1	PFAM: integrase family protein; KEGG: ccr:CC_1766 hypothetical protein
YP_001638272.1	PFAM: protein of unknown function DUF323; KEGG: bja:bll4742 hypothetical protein
YP_001638273.1	PFAM: sulfatase; KEGG: smd:Smed_1239 sulfatase
YP_001638275.1	KEGG: xac:XAC3730 methyltransferase; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001638276.1	KEGG: bur:Bcep18194_B2465 zinc-containing alcohol dehydrogenase superfamily
YP_001638277.1	KEGG: rle:RL3611 putative two-component response regulator transcriptional regulatory protein
YP_001638278.1	KEGG: nha:Nham_0235 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001638280.1	TIGRFAM: phage uncharacterized protein; PFAM: protein of unknown function DUF264; KEGG: nha:Nham_0801 phage uncharacterized protein-like
YP_001638281.1	KEGG: nha:Nham_0815 hypothetical protein
YP_001638282.1	PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; KEGG: nar:Saro_1452 DNA methylase N-4/N-6
YP_001638285.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bbt:BBta_0969 putative methyl-accepting chemotaxis protein
YP_001638287.1	PFAM: helicase domain protein; KEGG: gox:GOX1762 putative RNA helicase
YP_001638289.1	PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: sen:SACE_5346 RNA binding S1:resolvase, RNase H-like fold
YP_001638291.1	PFAM: ABC transporter related; KEGG: xau:Xaut_3811 ABC transporter related
YP_001638292.1	KEGG: xau:Xaut_3812 capsule polysaccharide export protein-like protein
YP_001638293.1	KEGG: atc:AGR_pAT_724 hypothetical protein
YP_001638294.1	KEGG: rle:RL1165 hypothetical protein
YP_001638295.1	membrane protein involved in the flagellar export apparatus
YP_001638296.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: rpe:RPE_1545 methyl-accepting chemotaxis sensory transducer
YP_001638297.1	KEGG: oan:Oant_1858 hypothetical protein
YP_001638298.1	TIGRFAM: flagellar export protein FliJ; KEGG: bja:blr2202 hypothetical protein
YP_001638299.1	involved in type III protein export during flagellum assembly
YP_001638300.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sme:SMc00654 response regulator,controls chromosomal replication initiation protein
YP_001638301.1	KEGG: rpe:RPE_3702 hypothetical protein
YP_001638302.1	KEGG: pen:PSEEN4077 chloramphenicol acetyltransferase
YP_001638303.1	NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate
YP_001638304.1	PFAM: Acetamidase/Formamidase; KEGG: mpt:Mpe_A3600 hypothetical protein
YP_001638305.1	KEGG: mes:Meso_1574 hypothetical protein
YP_001638306.1	KEGG: sun:SUN_1733 hypothetical protein
YP_001638307.1	PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: rru:Rru_A2348 glycosyl transferase
YP_001638308.1	KEGG: mpt:Mpe_A0733 hypothetical protein
YP_001638310.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: oan:Oant_0136 peptidase M20
YP_001638311.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bra:BRADO5691 putative xanthine dehydrogenase YagT-like, iron-sulfur binding subunit
YP_001638312.1	PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: nha:Nham_1040 molybdopterin dehydrogenase, FAD-binding
YP_001638313.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: swi:Swit_5315 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding
YP_001638314.1	PFAM: Camphor resistance CrcB protein; KEGG: hne:HNE_1001 CrcB protein
YP_001638315.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: atc:AGR_L_3039 hypothetical protein
YP_001638316.1	PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: xau:Xaut_0653 peptidase M15D VanX D-ala-D-ala dipeptidase
YP_001638318.1	KEGG: rpc:RPC_3616 hypothetical protein
YP_001638319.1	KEGG: nha:Nham_3843 transcriptional regulator, XRE family
YP_001638320.1	PFAM: regulatory protein MarR; KEGG: xau:Xaut_1908 transcriptional regulator, MarR family
YP_001638321.1	PFAM: glycosyl transferase family 2; KEGG: ter:Tery_2707 glycosyl transferase, family 2
YP_001638322.1	TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: tbd:Tbd_1881 alpha-D-glucose-1-phosphate cytidylyltransferase
YP_001638323.1	TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: tbd:Tbd_1880 CDP-glucose 4,6-dehydratase
YP_001638324.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; Methyltransferase domain protein; C-methyltransferase; KEGG: rpe:RPE_4255 C-methyltransferase
YP_001638325.1	PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: bms:BRA0437 dTDP-4-dehydrorhamnose 3,5-epimerase
YP_001638326.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: pla:Plav_3348 NAD-dependent epimerase/dehydratase
YP_001638327.1	PFAM: response regulator receiver; KEGG: ret:RHE_CH02917 probable two-component response regulator protein
YP_001638328.1	TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: gox:GOX0719 adenosylmethionine--8-amino-7-oxononanoate transaminase
YP_001638329.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
YP_001638330.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
YP_001638331.1	TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rpa:RPA3848 glycine cleavage system protein T2
YP_001638333.1	KEGG: ccr:CC_1576 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class V; aminotransferase class I and II
YP_001638334.1	PFAM: NLP/P60 protein; KEGG: rpe:RPE_3759 NLP/P60 protein
YP_001638335.1	KEGG: bbt:BBta_3892 hypothetical protein
YP_001638336.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: acr:Acry_1568 short-chain dehydrogenase/reductase SDR
YP_001638337.1	PFAM: MgtC/SapB transporter; KEGG: rpb:RPB_4554 MgtC/SapB transporter
YP_001638338.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: rsh:Rsph17029_4008 ATPase associated with various cellular activities, AAA_3
YP_001638339.1	KEGG: rde:RD1_0873 hypothetical protein
YP_001638340.1	KEGG: mca:MCA3084 hypothetical protein
YP_001638341.1	PFAM: von Willebrand factor type A; KEGG: rsh:Rsph17029_4011 von Willebrand factor, type A
YP_001638342.1	PFAM: von Willebrand factor type A; KEGG: rsp:RSP_3280 hypothetical protein
YP_001638343.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; KEGG: maq:Maqu_1949 TPR repeat-containing protein
YP_001638344.1	KEGG: pde:Pden_1131 hypothetical protein
YP_001638345.1	KEGG: psb:Psyr_1393 hypothetical protein
YP_001638346.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: xau:Xaut_1906 protein of unknown function DUF6 transmembrane
YP_001638347.1	KEGG: nha:Nham_0234 hypothetical protein
YP_001638348.1	KEGG: rpe:RPE_0517 OmpA/MotB domain protein
YP_001638349.1	TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: pla:Plav_1522 methionine-R-sulfoxide reductase
YP_001638350.1	PFAM: ribonuclease BN; KEGG: bbt:BBta_2397 putative membrane protein of unknown function with ribonuclease domain
YP_001638351.1	KEGG: oan:Oant_3652 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001638352.1	catalyzes the formation of malonyl-CoA from malonate and CoA
YP_001638354.1	PFAM: Collagen triple helix repeat; KEGG: rpc:RPC_2599 collagen triple helix repeat
YP_001638355.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; KEGG: nha:Nham_2553 HI0933-like protein
YP_001638356.1	PFAM: Integral membrane protein TerC; KEGG: atc:AGR_C_3415 putative transmembrane transport protein
YP_001638358.1	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: jan:Jann_1867 peptidase C56, PfpI
YP_001638359.1	KEGG: osa:4343816 Os07g0600000
YP_001638360.1	KEGG: rpb:RPB_2921 hypothetical protein
YP_001638362.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: atc:AGR_L_3376 hypothetical protein
YP_001638364.1	PFAM: conserved hypothetical protein; KEGG: rpe:RPE_3414 uncharacterised conserved protein UCP032025
YP_001638365.1	KEGG: bbt:BBta_5560 hypothetical protein
YP_001638366.1	PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_4111 major facilitator superfamily MFS_1
YP_001638367.1	PFAM: protein of unknown function DUF140; KEGG: rpb:RPB_1627 protein of unknown function DUF140
YP_001638368.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_4114 ABC transporter related
YP_001638369.1	PFAM: Mammalian cell entry related domain protein; KEGG: oan:Oant_2109 mammalian cell entry related domain protein
YP_001638370.1	KEGG: smd:Smed_1551 protein of unknown function DUF330
YP_001638371.1	PFAM: inositol monophosphatase; KEGG: rpa:RPA1156 putative myo-inositol monophosphatase 2 family protein
YP_001638372.1	KEGG: bov:BOV_0418 hypothetical protein
YP_001638373.1	TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: bja:bll7521 4-hydroxybenzoate octaprenyltransferase
YP_001638374.1	KEGG: bra:BRADO6103 conserved hypothetical protein; putative signal peptide
YP_001638375.1	PFAM: protein of unknown function DUF558; KEGG: rpa:RPA1151 hypothetical protein
YP_001638376.1	PFAM: Asparaginase/glutaminase; KEGG: mms:mma_3667 L-asparaginase
YP_001638377.1	KEGG: xau:Xaut_4204 glutamate--cysteine ligase; TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GCS2
YP_001638378.1	KEGG: bja:bll6457 hypothetical protein
YP_001638379.1	PFAM: SirA family protein; KEGG: mes:Meso_2429 SirA-like
YP_001638380.1	PFAM: NUDIX hydrolase; KEGG: rle:RL1593 putative ADP-ribose pyrophosphatase
YP_001638381.1	KEGG: bja:bll7889 hypothetical protein
YP_001638382.1	KEGG: sph:MGAS10270_Spy1299 hypothetical protein
YP_001638383.1	KEGG: xau:Xaut_4258 conserved hypothetical transmembrane signal peptide protein
YP_001638384.1	PFAM: protein of unknown function DUF1289; KEGG: xau:Xaut_4259 protein of unknown function DUF1289
YP_001638385.1	KEGG: sma:SAV5996 hypothetical protein
YP_001638386.1	TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: xau:Xaut_4260 cobalamin 5'-phosphate synthase
YP_001638387.1	KEGG: ret:RHE_CH02443 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase protein; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
YP_001638388.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rpd:RPD_2046 ATP-binding region, ATPase-like
YP_001638389.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: xau:Xaut_2917 (2Fe-2S)-binding domain protein
YP_001638390.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: azo:azo0022 putative isoquinoline 1-oxidoreductase, beta subunit
YP_001638391.1	KEGG: xcb:XC_3757 methyltransferase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001638392.1	PFAM: Amidase; KEGG: bja:bll5103 malonamidase E2
YP_001638393.1	PFAM: Extensin family protein; KEGG: xau:Xaut_1728 extensin family protein
YP_001638394.1	KEGG: xau:Xaut_2732 putative exported protein of unknown function
YP_001638395.1	PFAM: ribonuclease T2; KEGG: xau:Xaut_2731 ribonuclease T2
YP_001638396.1	PFAM: protein of unknown function DUF519; KEGG: mes:Meso_1970 protein of unknown function DUF519
YP_001638397.1	KEGG: nha:Nham_3268 hypothetical protein
YP_001638398.1	KEGG: nha:Nham_3760 hypothetical protein
YP_001638399.1	PFAM: FAD linked oxidase domain protein; KEGG: ret:RHE_CH00808 glycolate oxidase subunit D protein
YP_001638400.1	PFAM: cytochrome c class I; KEGG: gbe:GbCGDNIH1_1910 cytochrome c
YP_001638401.1	PFAM: regulatory protein MarR; KEGG: bja:blr0736 transcriptional regulatory protein
YP_001638402.1	KEGG: bbt:BBta_3054 hypothetical protein
YP_001638403.1	PFAM: protein of unknown function DUF1214; KEGG: xau:Xaut_1410 protein of unknown function DUF1214
YP_001638404.1	KEGG: rpe:RPE_1880 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_001638405.1	PFAM: protein of unknown function UPF0153; KEGG: bja:blr3103 hypothetical protein
YP_001638406.1	PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_3103 GCN5-related N-acetyltransferase
YP_001638407.1	PFAM: TadE family protein; KEGG: acr:Acry_2979 TadE family protein
YP_001638408.1	KEGG: bra:BRADO3362 hypothetical protein
YP_001638409.1	KEGG: bbt:BBta_7530 hypothetical protein
YP_001638410.1	PFAM: AFG1-family ATPase; KEGG: bms:BR1929 hypothetical protein
YP_001638411.1	TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: bbt:BBta_3948 putative 3-methyladenine DNA glycosylase
YP_001638412.1	PFAM: ribonuclease H; KEGG: pna:Pnap_1680 ribonuclease H
YP_001638413.1	KEGG: nha:Nham_1400 hypothetical protein
YP_001638414.1	KEGG: bja:bsr4462 hypothetical protein
YP_001638415.1	catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
YP_001638416.1	PFAM: sodium/hydrogen exchanger; KEGG: bja:bll1306 Na+/H+ antiporter
YP_001638417.1	PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: atc:AGR_C_3833 N-acetylmuramoyl-L-alanine amidase
YP_001638418.1	PFAM: heat shock protein DnaJ domain protein; KEGG: pla:Plav_2408 heat shock protein DnaJ domain protein
YP_001638419.1	KEGG: xau:Xaut_1724 hypothetical protein
YP_001638420.1	PFAM: UreE urease accessory domain protein; KEGG: rpb:RPB_1867 UreE urease accessory-like
YP_001638422.1	PFAM: dihydrouridine synthase DuS; KEGG: xau:Xaut_4250 TIM-barrel protein, YjbN family
YP_001638423.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bja:bll5864 hypothetical protein
YP_001638424.1	PFAM: response regulator receiver; KEGG: bra:BRADO6065 putative response regulator receiver (CheY-like protein)
YP_001638425.1	PFAM: BLUF domain protein; KEGG: mmw:Mmwyl1_2753 BLUF domain protein
YP_001638426.1	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: bbt:BBta_7242 putative flagellar hook protein FlgE
YP_001638427.1	TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: rpc:RPC_2014 flagellar hook-associated protein
YP_001638428.1	KEGG: rpc:RPC_2015 hypothetical protein
YP_001638429.1	KEGG: xau:Xaut_2621 hypothetical protein
YP_001638430.1	TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; KEGG: pla:Plav_1748 modification methylase, HemK family
YP_001638431.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_001638432.1	KEGG: eca:ECA2975 hypothetical protein
YP_001638433.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: xau:Xaut_2624 PTSINtr with GAF domain, PtsP
YP_001638434.1	KEGG: bra:BRADO0574 aspartokinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein
YP_001638435.1	KEGG: oan:Oant_1033 ubiquinone biosynthesis O-methyltransferase; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12
YP_001638436.1	PFAM: PEBP family protein; KEGG: swi:Swit_0873 PEBP family protein
YP_001638437.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpa:RPA0400 possible alcohol dehydrogenase and quinone oxidoreductase
YP_001638438.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
YP_001638439.1	PFAM: YceI family protein; KEGG: gbe:GbCGDNIH1_1625 hypothetical protein
YP_001638440.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
YP_001638441.1	KEGG: atc:AGR_C_2384 hypothetical protein
YP_001638442.1	PFAM: response regulator receiver; KEGG: oan:Oant_3678 response regulator receiver protein
YP_001638443.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: nha:Nham_2442 diguanylate cyclase (GGDEF domain)
YP_001638444.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: gka:GK1738 hypothetical protein
YP_001638445.1	flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine
YP_001638449.1	TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: xau:Xaut_0075 cysteine synthase A
YP_001638451.1	PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: mlo:mlr7916 hypothetical protein
YP_001638452.1	KEGG: ret:RHE_CH00634 hypothetical protein
YP_001638453.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: reu:Reut_A1474 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001638454.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20203 probable transcriptional regulator protein
YP_001638455.1	PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: rpc:RPC_2899 inositol phosphatase/fructose-1,6-bisphosphatase
YP_001638456.1	PFAM: phosphoribulokinase/uridine kinase; KEGG: nwi:Nwi_2693 phosphoribulokinase/uridine kinase
YP_001638457.1	KEGG: ppr:PBPRA1384 hypothetical protein
YP_001638458.1	PFAM: protein of unknown function DUF28; KEGG: xau:Xaut_3062 protein of unknown function DUF28
YP_001638460.1	KEGG: smd:Smed_5726 beta-lactamase-like protein
YP_001638461.1	KEGG: xau:Xaut_2465 hypothetical protein
YP_001638462.1	KEGG: mlo:mlr3471 hypothetical protein
YP_001638463.1	PFAM: polysaccharide biosynthesis protein; KEGG: rle:RL4299 putative polysaccharide export related protein
YP_001638464.1	KEGG: rpd:RPD_0900 hypothetical protein
YP_001638465.1	KEGG: mes:Meso_3041 OpgC protein
YP_001638466.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpa:RPA4522 haloacid dehalogenase-like hydrolase
YP_001638467.1	PFAM: ribulose-phosphate 3-epimerase; KEGG: rpb:RPB_3689 ribulose-phosphate 3-epimerase
YP_001638468.1	PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_0639 GCN5-related N-acetyltransferase
YP_001638469.1	PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: mag:amb1108 arginine/lysine/ornithine decarboxylase
YP_001638470.1	TIGRFAM: TonB family protein; KEGG: rsh:Rsph17029_2581 TonB family protein
YP_001638471.1	TIGRFAM: molybdenum cofactor synthesis domain protein; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: rpd:RPD_1202 molybdenum cofactor biosynthesis protein
YP_001638472.1	TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: bra:BRADO2830 adenylosuccinate lyase (adenylosuccinase) (ASL)
YP_001638473.1	PFAM: aminotransferase class IV; KEGG: rso:RS01735 putative D-alanine aminotransferase (D-aspartate aminotransferase) protein
YP_001638474.1	KEGG: rpc:RPC_0989 hypothetical protein
YP_001638475.1	PFAM: adenylosuccinate synthetase; KEGG: ret:RHE_CH03344 adenylosuccinate synthetase protein
YP_001638476.1	KEGG: bja:bll7051 hypothetical protein
YP_001638477.1	binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters
YP_001638478.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mes:Meso_3605 diguanylate cyclase/phosphodiesterase
YP_001638480.1	PFAM: GCN5-related N-acetyltransferase; KEGG: aha:AHA_2068 protein PhnO
YP_001638481.1	KEGG: bbt:BBta_6759 pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA); TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_001638482.1	PFAM: GTPase EngC; KEGG: mlo:mlr1879 putative GTPase
YP_001638483.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: rpc:RPC_0437 NAD-dependent epimerase/dehydratase
YP_001638484.1	KEGG: bja:bll2323 hypothetical protein
YP_001638485.1	PFAM: proton/sugar symporter LacY; major facilitator superfamily MFS_1; KEGG: rru:Rru_A1657 major facilitator superfamily MFS_1
YP_001638486.1	binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity
YP_001638487.1	KEGG: bba:Bd0310 hypothetical protein
YP_001638488.1	KEGG: bbt:BBta_0217 putative exported protein of unknown function
YP_001638490.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nmu:Nmul_A1489 short-chain dehydrogenase/reductase SDR
YP_001638491.1	PFAM: isochorismatase hydrolase; KEGG: bja:blr8041 hypothetical protein
YP_001638492.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eba:ebA1699 putative glutathione-dependent formaldehyde dehydrogenase
YP_001638493.1	KEGG: bpm:BURPS1710b_1365 hypothetical protein
YP_001638494.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rsq:Rsph17025_2997 short-chain dehydrogenase/reductase SDR
YP_001638495.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbt:BBta_3170 putative short-chain dehydrogenase/reductase
YP_001638497.1	PFAM: ABC-1 domain protein; KEGG: spe:Spro_2799 ABC-1 domain protein
YP_001638499.1	PFAM: peptidase M23B; KEGG: nha:Nham_0660 peptidase M23B
YP_001638500.1	PFAM: protein of unknown function DUF1311; KEGG: pde:Pden_3634 protein of unknown function DUF1311
YP_001638501.1	PFAM: glutamyl-tRNA synthetase class Ic; KEGG: xau:Xaut_3840 glutamyl-tRNA synthetase class Ic
YP_001638504.1	molecular chaperone
YP_001638506.1	PFAM: gamma-glutamyltranspeptidase; KEGG: xau:Xaut_0189 gamma-glutamyltransferase
YP_001638507.1	PFAM: Dak kinase; Dak phosphatase; KEGG: net:Neut_1377 glycerone kinase
YP_001638508.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pla:Plav_2215 methyltransferase type 11
YP_001638509.1	PFAM: major facilitator superfamily MFS_1; KEGG: har:HEAR2461 putative oxalate/formate antiporter
YP_001638510.1	KEGG: xau:Xaut_3280 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_001638511.1	KEGG: bbt:BBta_3151 putative CobE protein
YP_001638512.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bbt:BBta_4589 putative diguanylate cyclase (GGDEF)
YP_001638513.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pde:Pden_0302 transcriptional regulator, LysR family
YP_001638514.1	PFAM: transmembrane pair domain protein; KEGG: atc:AGR_C_3030 hypothetical protein
YP_001638515.1	TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bbt:BBta_3152 precorrin-4 C(11)-methyltransferase
YP_001638516.1	responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid
YP_001638517.1	PFAM: helix-turn-helix domain protein; KEGG: oan:Oant_0753 transcriptional regulator, XRE family
YP_001638518.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bja:bll7423 hypothetical protein
YP_001638519.1	PFAM: major facilitator superfamily MFS_1; KEGG: gbe:GbCGDNIH1_1206 antimicrobial peptide efflux protein RosA
YP_001638520.1	TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bja:bll6310 putative exopolysaccharide production protein
YP_001638521.1	KEGG: nha:Nham_0618 putative ferric uptake regulator, FUR family
YP_001638522.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll7771 ABC transporter ATP-binding protein
YP_001638523.1	PFAM: ABC-3 protein; KEGG: rru:Rru_A3703 ABC-3 transporter component
YP_001638524.1	KEGG: bra:BRADO4145 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein
YP_001638525.1	KEGG: bja:blr3859 hypothetical protein
YP_001638526.1	PFAM: ChaC family protein; AIG2 family protein; KEGG: oan:Oant_4148 ChaC family protein
YP_001638527.1	TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: mes:Meso_0952 DNA repair protein RecO
YP_001638528.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_001638529.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_001638530.1	PFAM: Extracellular ligand-binding receptor; KEGG: xau:Xaut_3905 extracellular ligand-binding receptor
YP_001638531.1	PFAM: protein of unknown function DUF182; KEGG: xau:Xaut_3909 protein of unknown function DUF182
YP_001638532.1	KEGG: rpe:RPE_1660 xanthine dehydrogenase accessory factor
YP_001638533.1	PFAM: molybdopterin binding domain; KEGG: rpa:RPA3797 hypothetical protein
YP_001638534.1	KEGG: mes:Meso_1294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase
YP_001638535.1	KEGG: bbt:BBta_7189 hypothetical protein
YP_001638536.1	PFAM: formyl transferase domain protein; KEGG: bam:Bamb_5891 formyl transferase domain protein
YP_001638537.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pub:SAR11_0304 short chain dehydrogenase
YP_001638538.1	KEGG: rpc:RPC_1642 hypothetical protein
YP_001638539.1	PFAM: Exopolysaccharide synthesis ExoD; KEGG: xau:Xaut_4269 exopolysaccharide synthesis ExoD
YP_001638540.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_4461 ABC transporter related
YP_001638541.1	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: xau:Xaut_4462 lipoprotein releasing system, transmembrane protein, LolC/E family
YP_001638542.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_001638543.1	PFAM: protein of unknown function DUF1467; KEGG: xau:Xaut_4616 protein of unknown function DUF1467
YP_001638544.1	KEGG: jan:Jann_3164 glyoxalase/bleomycin resistance protein/dioxygenase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_001638545.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: xau:Xaut_4618 beta-lactamase domain protein
YP_001638546.1	TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: mlo:mll1351 biotin-protein ligase birA
YP_001638547.1	TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: pla:Plav_3213 proton-translocating NADH-quinone oxidoreductase, chain N
YP_001638548.1	KEGG: mes:Meso_1034 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_001638549.1	KEGG: pla:Plav_3215 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I)
YP_001638550.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: pla:Plav_3216 NADH-ubiquinone oxidoreductase chain 4L
YP_001638551.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: nwi:Nwi_1878 NADH dehydrogenase subunit J
YP_001638552.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001638553.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001638554.1	Catalyzes the transfer of electrons from NADH to quinone
YP_001638555.1	part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase
YP_001638556.1	KEGG: jan:Jann_1176 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit
YP_001638557.1	KEGG: bra:BRADO4183 NADH-quinone oxidoreductase chain D (NADH dehydrogenase I, chain D) (NDH-1, chain D); TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa
YP_001638558.1	KEGG: xau:Xaut_4631 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit
YP_001638559.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_001638560.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: mes:Meso_1022 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YP_001638561.1	PFAM: SCP-like extracellular; KEGG: bja:blr1486 hypothetical protein
YP_001638562.1	TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain protein; KEGG: sme:SMa1243 Azu1 pseudoazurin (blue copper protein)
YP_001638563.1	TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: bja:blr7377 carbamoylphosphate synthase large subunit
YP_001638564.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YP_001638566.1	PFAM: protein of unknown function DUF1022; KEGG: pla:Plav_2310 protein of unknown function DUF1022
YP_001638567.1	KEGG: bbt:BBta_6803 thioredoxin reductase, FAD/NAD(P)-binding; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001638568.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_2754 transcriptional regulator, LysR family
YP_001638569.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_001638570.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: oan:Oant_2273 acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_001638571.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: xau:Xaut_3502 acetyl-CoA carboxylase, biotin carboxylase
YP_001638572.1	PFAM: leucyl/phenylalanyl-tRNA--protein transferase; KEGG: nwi:Nwi_1757 leucyl/phenylalanyl-tRNA--protein transferase
YP_001638573.1	PFAM: regulatory protein TetR; KEGG: acr:Acry_3038 transcriptional regulator, TetR family
YP_001638574.1	KEGG: sus:Acid_5124 hypothetical protein
YP_001638575.1	KEGG: mlo:mlr0199 cellulase-like protein
YP_001638576.1	PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: nwi:Nwi_1760 NADH-ubiquinone oxidoreductase
YP_001638577.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_001638578.1	KEGG: acr:Acry_2813 arsenical pump membrane protein
YP_001638579.1	KEGG: hne:HNE_0990 arsenical resistance protein ArsH
YP_001638580.1	PFAM: PRC-barrel domain protein; KEGG: atc:AGR_C_723 hypothetical protein
YP_001638581.1	PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: rpc:RPC_2765 ion transport 2
YP_001638583.1	KEGG: eba:ebA6904 hypothetical protein
YP_001638584.1	PFAM: Endoribonuclease L-PSP; KEGG: reh:H16_B2517 putative regulator of purine biosynthesis
YP_001638585.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: psb:Psyr_2937 NADH:flavin oxidoreductase/NADH oxidase
YP_001638586.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psp:PSPPH_2295 transcriptional regulator, LysR family
YP_001638587.1	KEGG: mlo:mlr3990 weak similarity to phospholipase
YP_001638588.1	KEGG: zmo:ZMO0488 probable GTP binding protein
YP_001638589.1	KEGG: rpa:RPA1404 glutamyl-tRNA(Gln) amidotransferase subunit A
YP_001638590.1	PFAM: ribonuclease BN; KEGG: bra:BRADO2085 conserved hypothetical protein; putative membrane protein; putative ribonuclease
YP_001638591.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: rha:RHA1_ro02434 hypothetical protein
YP_001638592.1	KEGG: rpa:RPA2075 putative signal transduction histidine kinase with GAF and PAS/PAC domains; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001638593.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sal:Sala_1165 short-chain dehydrogenase/reductase SDR
YP_001638594.1	PFAM: protein of unknown function DUF938; KEGG: reh:H16_B2396 hypothetical protein
YP_001638595.1	KEGG: syf:Synpcc7942_1330 hypothetical protein
YP_001638596.1	KEGG: rpd:RPD_2389 ABC transporter related
YP_001638597.1	PFAM: K potassium transporter; KEGG: rpd:RPD_2692 K+ potassium transporter
YP_001638598.1	KEGG: bxe:Bxe_B1808 hypothetical protein
YP_001638599.1	KEGG: rme:Rmet_2604 short-chain dehydrogenase/reductase SDR
YP_001638600.1	KEGG: nha:Nham_0970 hypothetical protein
YP_001638601.1	PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: gvi:glr1689 hypothetical protein
YP_001638602.1	PFAM: metallophosphoesterase; KEGG: psb:Psyr_2599 metallophosphoesterase
YP_001638604.1	PFAM: protein of unknown function DUF892; KEGG: jan:Jann_2208 protein of unknown function DUF892
YP_001638605.1	KEGG: sco:SCO3841 hypothetical protein
YP_001638606.1	PFAM: formate/nitrite transporter; KEGG: sde:Sde_2826 formate/nitrate transporter
YP_001638607.1	PFAM: protein kinase; Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: tyrosine protein kinase; protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: bja:bll2800 probable bifunctional serine/threonine kinase and phosphatase
YP_001638608.1	PFAM: glycosyl transferase family 2; KEGG: smd:Smed_3726 cellulose synthase (UDP-forming)
YP_001638609.1	KEGG: ret:RHE_PE00362 hypothetical protein
YP_001638611.1	PFAM: acetate and butyrate kinase; KEGG: xau:Xaut_3252 acetate kinase
YP_001638612.1	KEGG: xau:Xaut_2306 hypothetical protein
YP_001638613.1	PFAM: protein of unknown function DUF344; KEGG: nha:Nham_0877 protein of unknown function DUF344
YP_001638614.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: xau:Xaut_4353 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
YP_001638615.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xau:Xaut_4352 efflux transporter, RND family, MFP subunit
YP_001638616.1	KEGG: xau:Xaut_2894 protein of unknown function DUF395 YeeE/YedE
YP_001638617.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: xau:Xaut_2895 protein of unknown function DUF395 YeeE/YedE
YP_001638618.1	PFAM: regulatory protein ArsR; transcriptional regulator TrmB; KEGG: rme:Rmet_2370 transcriptional regulator, ArsR family
YP_001638619.1	KEGG: xau:Xaut_2619 ABC transporter related; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001638620.1	TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO2772 putative nitrate ABC transporter (permease protein) (NtrB-like protein)
YP_001638621.1	KEGG: bja:bll5734 ABC transporter nitrate-binding protein
YP_001638622.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rubredoxin-type Fe(Cys)4 protein; KEGG: pol:Bpro_4853 rubredoxin-type Fe(Cys)4 protein
YP_001638623.1	KEGG: pol:Bpro_4852 acyl-CoA dehydrogenase-like
YP_001638624.1	PFAM: OsmC family protein; KEGG: mfa:Mfla_2175 OsmC-like protein
YP_001638625.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pol:Bpro_4849 transcriptional regulator, NifA subfamily, fis family
YP_001638626.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bps:BPSS1864 AraC-family regulatory protein
YP_001638627.1	PFAM: ThiJ/PfpI domain protein; KEGG: sfu:Sfum_2623 ThiJ/PfpI domain protein
YP_001638628.1	TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: mxa:MXAN_5858 probable cation:acetate symporter ActP
YP_001638629.1	PFAM: protein of unknown function DUF485; KEGG: mxa:MXAN_5857 hypothetical protein
YP_001638630.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rpa:RPA1563 putative nitrilase
YP_001638631.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpa:RPA3387 transcriptional regulator, LysR family
YP_001638632.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mes:Meso_3107 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001638633.1	PFAM: helix-turn-helix domain protein; KEGG: ccr:CC_1006 transcriptional regulator, Cro/CI family
YP_001638634.1	KEGG: rru:Rru_B0039 type I secretion system ATPase, PrtD; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001638635.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: ccr:CC_1009 RsaA secretion system, membrane protein RsaE
YP_001638636.1	KEGG: lma:LmjF35.0540 proteophosphoglycan 5
YP_001638637.1	PFAM: glycosyl transferase family 2; KEGG: bbt:BBta_3605 putative glycosyltransferase, possibly the catalytic subunit of a cellulose synthase
YP_001638638.1	KEGG: nha:Nham_4220 hypothetical protein
YP_001638639.1	KEGG: bbt:BBta_3603 hypothetical protein
YP_001638640.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_2775 ABC transporter related
YP_001638641.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_2776 binding-protein-dependent transport systems inner membrane component
YP_001638642.1	KEGG: xau:Xaut_2774 ABC transporter substrate-binding protein
YP_001638643.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pde:Pden_5014 acyl-CoA dehydrogenase, type 2, C-terminal domain
YP_001638644.1	PFAM: luciferase family protein; KEGG: pde:Pden_5013 alkanesulfonate monooxygenase
YP_001638645.1	TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bbt:BBta_3309 putative alkanesulfonate ABC transporter, substrate binding protein
YP_001638646.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: pde:Pden_5003 cupin 2, conserved barrel domain protein
YP_001638647.1	KEGG: rrs:RoseRS_1758 O-acetylhomoserine/O-acetylserine sulfhydrylase
YP_001638649.1	KEGG: ccr:CC_2651 serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein
YP_001638650.1	PFAM: cyclic nucleotide-binding; KEGG: mxa:MXAN_6249 cyclic nucleotide-binding domain protein
YP_001638651.1	TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mpt:Mpe_A0023 putative cysteine desulfurase
YP_001638652.1	KEGG: acr:Acry_1763 hypothetical protein
YP_001638653.1	KEGG: mxa:MXAN_4110 transcriptional regulator, LysR family
YP_001638654.1	PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpc:RPC_4596 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001638655.1	KEGG: xau:Xaut_2341 porin
YP_001638657.1	PFAM: protein of unknown function DUF1236; KEGG: rpe:RPE_0234 protein of unknown function DUF1236
YP_001638658.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ccr:CC_2903 cold-shock domain family protein
YP_001638659.1	KEGG: bra:BRADO3284 hypothetical protein; putative signal peptide
YP_001638661.1	KEGG: psb:Psyr_3815 hypothetical protein
YP_001638662.1	KEGG: mpt:Mpe_A2803 putative ABC-type Co2+ transport system, periplasmic component
YP_001638663.1	KEGG: ccr:CC_0836 sensor histidine kinase, putative; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001638664.1	PFAM: membrane protein of uknown function UCP014873; KEGG: smd:Smed_0077 membrane protein of uknown function UCP014873
YP_001638665.1	in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever
YP_001638666.1	KEGG: nwi:Nwi_0010 hypothetical protein
YP_001638667.1	involved in the assembly of the urease metallocenter; possible nickel donor
YP_001638668.1	PFAM: Urease accessory protein UreF; KEGG: bra:BRADO5865 putative urease accessory protein UreF
YP_001638669.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
YP_001638670.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
YP_001638671.1	TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: bbt:BBta_1963 urease accessory protein UreG
YP_001638672.1	PFAM: Urease accessory protein UreD; KEGG: bra:BRADO5861 putative urease accessory protein UreD
YP_001638673.1	TIGRFAM: urea ABC transporter, urea binding protein; KEGG: rpd:RPD_3864 amide-UreA binding protein
YP_001638674.1	PFAM: protein of unknown function DUF1624; KEGG: pap:PSPA7_5557 hypothetical protein
YP_001638675.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pae:PA4837 probable outer membrane protein
YP_001638676.1	KEGG: rpc:RPC_3188 hypothetical protein
YP_001638677.1	KEGG: mlo:mlr0593 hypothetical protein
YP_001638678.1	PFAM: OsmC family protein; KEGG: acr:Acry_2200 OsmC family protein
YP_001638679.1	KEGG: pol:Bpro_2802 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001638680.1	catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA
YP_001638681.1	PFAM: phospholipase/Carboxylesterase; KEGG: xau:Xaut_0060 phospholipase/carboxylesterase
YP_001638682.1	catalyzes the formation of formyl-CoA from oxalyl-CoA
YP_001638683.1	PFAM: Domain of unknown function DUF1929; KEGG: gvi:gll4251 similarity to galactose oxidase
YP_001638684.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll3149 putative oxalate:formate antiporter
YP_001638685.1	PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_B1702 oxalate / formate antiporter, MFS-type, OFA family
YP_001638686.1	PFAM: CBS domain containing protein; KEGG: ttj:TTHA0349 CBS domain protein
YP_001638688.1	KEGG: rbe:RBE_0615 hypothetical protein
YP_001638690.1	TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bra:BRADO4956 putative formyl-CoA transferase
YP_001638691.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: xau:Xaut_0485 transcriptional regulator, GntR family
YP_001638692.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: xau:Xaut_1926 cobalamin synthesis protein P47K
YP_001638693.1	PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: rpb:RPB_1345 serine-type D-Ala-D-Ala carboxypeptidase
YP_001638694.1	KEGG: bbr:BB3075 hypothetical protein
YP_001638697.1	PFAM: monooxygenase FAD-binding; KEGG: sma:SAV1134 hydroxylase
YP_001638698.1	TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: rpe:RPE_3943 6-pyruvoyl tetrahydropterin synthase and hypothetical protein
YP_001638699.1	TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: xau:Xaut_1874 ExsB protein
YP_001638700.1	PFAM: LmbE family protein; KEGG: rpd:RPD_0576 LmbE-like protein
YP_001638701.1	PFAM: glycosyl transferase family 2; KEGG: rba:RB4337 similar to glycosyl transferase
YP_001638702.1	KEGG: sme:SMb20340 hypothetical protein
YP_001638704.1	KEGG: rba:RB4336 hypothetical protein
YP_001638705.1	PFAM: glycosyl transferase family 2; KEGG: rpd:RPD_0578 glycosyl transferase, family 2
YP_001638706.1	PFAM: glycosyl transferase group 1; KEGG: rba:RB4333 probable galactosyltransferase
YP_001638707.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: xau:Xaut_2849 phosphotransferase system, phosphocarrier protein HPr
YP_001638708.1	PFAM: PTS system fructose subfamily IIA component; KEGG: nha:Nham_0440 PTS system fructose subfamily IIA component
YP_001638709.1	KEGG: rpb:RPB_0465 HPr kinase
YP_001638710.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpd:RPD_0368 ATP-binding region, ATPase-like
YP_001638711.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpd:RPD_0367 response regulator receiver
YP_001638712.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mes:Meso_2207 pyridoxamine 5'-phosphate oxidase-related, FMN-binding
YP_001638713.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_001638714.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: rpa:RPA1807 possible heavy metal efflux pump, HlyD family secretion protein
YP_001638715.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: nha:Nham_3298 heavy metal efflux pump CzcA
YP_001638716.1	KEGG: cvi:CV_3051 probable transcriptional regulator lacI family
YP_001638718.1	PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bme:BMEI1055 penicillin-binding protein 1A
YP_001638719.1	KEGG: pla:Plav_2552 hypothetical protein
YP_001638720.1	KEGG: bra:BRADO7005 conserved hypothetical protein; putative flagellin C-ter domain
YP_001638721.1	PFAM: flagellar FlbT family protein; KEGG: pla:Plav_2550 flagellar FlbT family protein
YP_001638723.1	PFAM: acyltransferase 3; KEGG: rpe:RPE_4819 acyltransferase 3
YP_001638724.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dar:Daro_2752 metal-dependent phosphohydrolase, HD subdomain
YP_001638725.1	KEGG: sil:SPO3438 hypothetical protein
YP_001638726.1	PFAM: protein of unknown function DUF442; KEGG: atc:AGR_L_2726 hypothetical protein
YP_001638727.1	catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential
YP_001638728.1	KEGG: afw:Anae109_3322 hypothetical protein
YP_001638729.1	KEGG: xau:Xaut_4179 hypothetical protein
YP_001638730.1	PFAM: protein of unknown function DUF849; KEGG: xau:Xaut_4047 protein of unknown function DUF849
YP_001638731.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: xau:Xaut_4048 two component, sigma54 specific, transcriptional regulator, fis family
YP_001638732.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xau:Xaut_4049 histidine kinase
YP_001638733.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_4050 ABC transporter related
YP_001638734.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_4051 binding-protein-dependent transport systems inner membrane component
YP_001638735.1	KEGG: xau:Xaut_4052 NMT1/THI5 like domain protein
YP_001638736.1	blocks the formation of polar Z-ring septums
YP_001638737.1	KEGG: pla:Plav_3284 hypothetical protein
YP_001638738.1	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: rpd:RPD_0699 GTP-binding protein TypA
YP_001638739.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; CHASE3 domain protein; KEGG: rpb:RPB_2961 methyl-accepting chemotaxis sensory transducer
YP_001638740.1	blocks the formation of polar Z-ring septums
YP_001638741.1	TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: acr:Acry_1991 septum site-determining protein MinD
YP_001638742.1	TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: smd:Smed_4342 cell division topological specificity factor MinE
YP_001638743.1	PFAM: cytochrome P450; KEGG: rpe:RPE_0057 cytochrome P450
YP_001638744.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bra:BRADO1816 putative gluconolactonase
YP_001638745.1	KEGG: mjl:Mjls_4980 putative dehydrogenase protein
YP_001638746.1	PFAM: Carbohydrate-selective porin OprB; KEGG: gbe:GbCGDNIH1_1489 porin
YP_001638747.1	KEGG: xau:Xaut_2677 transposase IS4 family protein
YP_001638748.1	KEGG: neu:NE2536 integrase, catalytic core
YP_001638749.1	PFAM: extracellular solute-binding protein family 5; KEGG: rle:pRL120434 putative substrate-binding component of ABC transporter
YP_001638750.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA0760 putative oligopeptide ABC transporter, permease component
YP_001638751.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA0759 putative oligopeptide ABC transporter, permease component
YP_001638752.1	KEGG: pol:Bpro_0383 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001638753.1	KEGG: pol:Bpro_0384 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001638754.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: xau:Xaut_3248 methylmalonate-semialdehyde dehydrogenase
YP_001638755.1	PFAM: cyclase/dehydrase; carbon monoxide dehydrogenase subunit G; KEGG: sme:SMc01132 hypothetical protein
YP_001638756.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO4579 putative branched-chain amino acid ABC transporter, ATP-binding protein (LivF-like)
YP_001638757.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll6233 ABC transporter ATP-binding protein
YP_001638758.1	PFAM: inner-membrane translocator; KEGG: bbt:BBta_3735 putative branched-chain amino acid ABC transporter, permease protein
YP_001638759.1	PFAM: inner-membrane translocator; KEGG: bbt:BBta_3734 putative branched-chain amino acid ABC transporter, permease protein
YP_001638760.1	PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_3733 putative branched-chain amino acid ABC transporter, periplasmic-binding protein
YP_001638761.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bra:BRADO4584 putative carbon-monoxide dehydrogenase large subunit, CoxL-like protein
YP_001638762.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bbt:BBta_3731 putative carbon-monoxide dehydrogenase small subunit, CoxS-like protein
YP_001638763.1	PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bja:bll6239 probable carbon monoxide dehydrogenase medium chain
YP_001638764.1	PFAM: regulatory protein TetR; KEGG: bja:blr6240 transcriptional regulatory protein
YP_001638765.1	KEGG: bbt:BBta_6028 N-carbamoyl-L-amino acid hydrolase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001638766.1	catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate
YP_001638767.1	KEGG: xau:Xaut_3248 methylmalonate-semialdehyde dehydrogenase
YP_001638768.1	KEGG: bur:Bcep18194_C7468 transcriptional regulator, LysR family
YP_001638770.1	PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: rsh:Rsph17029_3540 DEAD/DEAH box helicase domain protein
YP_001638771.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: sfu:Sfum_0727 ammonium transporter
YP_001638772.1	TIGRFAM: urea transporter; PFAM: Urea transporter; KEGG: bmb:BruAb1_1360 hypothetical urea transporter
YP_001638773.1	PFAM: Urease accessory protein UreD; KEGG: yen:YE0957 urease accessory protein
YP_001638774.1	TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: bov:BOV_1317 urease accessory protein UreG
YP_001638775.1	PFAM: Urease accessory protein UreF; KEGG: yen:YE0955 urease accessory protein
YP_001638776.1	PFAM: UreE urease accessory domain protein; KEGG: bov:BOV_1315 putative urease accessory protein UreE
YP_001638777.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
YP_001638778.1	TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: ypm:YP_2478 putative membrane protein
YP_001638779.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
YP_001638780.1	KEGG: bmb:BruAb1_1354 UreB-2, urease, beta subunit; TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit
YP_001638781.1	KEGG: yen:YE0951 urease gamma subunit; TIGRFAM: urease, gamma subunit; PFAM: Urease gamma subunit region
YP_001638782.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mpt:Mpe_A2804 outer membrane receptor protein
YP_001638783.1	KEGG: mpt:Mpe_A2803 putative ABC-type Co2+ transport system, periplasmic component
YP_001638784.1	KEGG: bam:Bamb_2344 membrane protein-like protein
YP_001638785.1	transposase and inactivated derivatives; KEGG: hch:HCH_04570 transposase and inactivated derivatives
YP_001638787.1	PFAM: glucose sorbosone dehydrogenase; KEGG: mes:Meso_2552 glucose sorbosone dehydrogenase
YP_001638788.1	PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_5011 putative alpha/beta hydrolase
YP_001638789.1	KEGG: sme:SMa1515 hypothetical protein
YP_001638790.1	KEGG: afw:Anae109_0554 protein of unknown function DUF1468
YP_001638791.1	PFAM: protein of unknown function DUF112 transmembrane; KEGG: afw:Anae109_0553 protein of unknown function DUF112 transmembrane
YP_001638792.1	PFAM: conserved hypothetical protein; KEGG: afw:Anae109_0552 uncharacterized protein UPF0065
YP_001638793.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rle:pRL110509 putative oxidoreductase
YP_001638794.1	KEGG: nha:Nham_0159 phosphoglycerate mutase 1 family; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase
YP_001638795.1	KEGG: oan:Oant_1526 hypothetical protein
YP_001638797.1	KEGG: ang:An11g08860 hypothetical protein
YP_001638798.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pst:PSPTO_1056 oxidoreductase, short chain dehydrogenase/reductase family
YP_001638800.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: xau:Xaut_4571 alpha/beta hydrolase fold-3 domain protein
YP_001638801.1	KEGG: psp:PSPPH_1261 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001638802.1	PFAM: cytochrome P450; KEGG: atc:AGR_C_2890 cytochrome P450 hydroxylase
YP_001638803.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: ccr:CC_0740 sensory box/GGDEF family protein
YP_001638804.1	PFAM: protein of unknown function DUF1194; KEGG: gbe:GbCGDNIH1_1872 hypothetical protein
YP_001638805.1	PFAM: ApbE family lipoprotein; KEGG: pna:Pnap_3962 ApbE family lipoprotein
YP_001638806.1	PFAM: FMN-binding domain protein; KEGG: pna:Pnap_3961 regulatory protein, putative
YP_001638807.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: sil:SPO1513 hypothetical protein
YP_001638808.1	KEGG: sil:SPO1514 hypothetical protein
YP_001638809.1	KEGG: dar:Daro_1001 cytochrome c550
YP_001638810.1	SMART: extracellular solute-binding protein family 3; KEGG: swi:Swit_0692 extracellular solute-binding protein, family 3
YP_001638811.1	TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: swi:Swit_0693 pyrrolo-quinoline quinone
YP_001638812.1	PFAM: major facilitator superfamily MFS_1; KEGG: rpa:RPA1880 putative membrane transport protein-major facilitator superfamily
YP_001638814.1	KEGG: pau:PA14_45090 hypothetical protein
YP_001638817.1	KEGG: mmw:Mmwyl1_0385 hypothetical protein
YP_001638818.1	KEGG: aba:Acid345_2422 hypothetical protein
YP_001638820.1	KEGG: ret:RHE_PF00244 hypothetical protein
YP_001638821.1	PFAM: peptidase M48 Ste24p; KEGG: psb:Psyr_4950 peptidase M48, Ste24p
YP_001638823.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: acr:Acry_2400 cupin 2, conserved barrel domain protein
YP_001638824.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mba:Mbar_A0777 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase
YP_001638825.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pst:PSPTO_2864 transcriptional regulator, LysR family
YP_001638826.1	PFAM: protein of unknown function DUF849; KEGG: bja:bll5461 hypothetical protein
YP_001638827.1	PFAM: UspA domain protein; KEGG: mlo:mlr6608 hypothetical protein
YP_001638828.1	PFAM: cytochrome c class I; KEGG: rpa:RPA4235 putative cytochrome c, class I
YP_001638829.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rpd:RPD_1357 regulatory protein, Crp
YP_001638830.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpe:BP0263 probable ATP-binding component of ABC transporter
YP_001638831.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccr:CC_0761 ABC transporter, ATP-binding protein CydD
YP_001638832.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: mms:mma_2014 cytochrome bd-I oxidase subunit I
YP_001638833.1	KEGG: rle:pRL90279 putative transmembrane cytochrome bd-II oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II
YP_001638834.1	TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: bpa:BPP4023 hypothetical protein
YP_001638835.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: pst:PSPTO_3191 transcriptional regulator, DeoR family
YP_001638836.1	PFAM: Amidase; KEGG: cmi:CMM_2656 putative amidase
YP_001638837.1	PFAM: response regulator receiver; histidine kinase A domain protein; KEGG: rle:RL2731 putative two-component sensor histidine kinase transcriptional regulatory protein
YP_001638838.1	KEGG: rpa:RPA3787 hypothetical protein
YP_001638839.1	KEGG: atc:AGR_L_3021 hypothetical protein; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2
YP_001638840.1	KEGG: atc:AGR_L_3024 hypothetical protein
YP_001638841.1	PFAM: glycoside hydrolase family 8; KEGG: smd:Smed_5210 cellulase
YP_001638842.1	KEGG: ret:RHE_CH01545 hypothetical protein
YP_001638843.1	KEGG: mmu:100042292 similar to CG10953-PA
YP_001638844.1	KEGG: sit:TM1040_3646 protein of unknown function DUF395, YeeE/YedE
YP_001638845.1	PFAM: glycosyl transferase group 1; KEGG: ppu:PP_1786 glycosyl transferase, putative
YP_001638846.1	KEGG: bxe:Bxe_A3033 hypothetical protein
YP_001638847.1	KEGG: bbr:BB2662 hypothetical protein
YP_001638848.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity
YP_001638849.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mlo:mlr8397 hypothetical protein
YP_001638850.1	PFAM: protein of unknown function DUF461; nuclear export factor GLE1; KEGG: bra:BRADO5142 conserved hypothetical protein; putative signal peptide; putative nuclear export factor GLE1 domain
YP_001638851.1	PFAM: protein of unknown function DUF461; KEGG: xau:Xaut_0418 protein of unknown function DUF461
YP_001638852.1	PFAM: electron transport protein SCO1/SenC; KEGG: bra:BRADO6747 putative electron transport protein (SCO1/SenC/PrrC-like)
YP_001638854.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_B2704 TonB-dependent receptor
YP_001638855.1	PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: rle:RL2172 putative peptidase
YP_001638856.1	PFAM: Carbohydrate-selective porin OprB; KEGG: bra:BRADO6357 putative carbohydrate porin, OprB family
YP_001638857.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mpt:Mpe_A2899 putative GntR-family transcription regulator
YP_001638858.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rpa:RPA2543 TrapT family, DctP subunit, C4-dicarboxylate periplasmic binding protein
YP_001638859.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: rpa:RPA2542 possible TrapT family, DctQ subunit, C4-dicarboxylate transport
YP_001638860.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpa:RPA2541 TrapT family, DctM subunit, C4-dicarboxylate transport
YP_001638863.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: sit:TM1040_1439 pyridoxal-5'-phosphate-dependent enzyme, beta subunit
YP_001638865.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpe:RPE_0242 peptidoglycan-binding domain 1 protein
YP_001638866.1	PFAM: protein of unknown function DUF606; KEGG: bcz:pE33L466_0268 hypothetical protein
YP_001638867.1	PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: rpa:RPA2553 hypothetical protein
YP_001638868.1	TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: bbt:BBta_3916 penicillin-binding protein 1C (PBP-1C)
YP_001638869.1	PFAM: small multidrug resistance protein; KEGG: swi:Swit_3611 small multidrug resistance protein
YP_001638870.1	PFAM: helix-turn-helix domain protein; KEGG: bbt:BBta_0665 hypothetical protein
YP_001638871.1	TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: bja:bll0976 sortase, putative
YP_001638872.1	PFAM: von Willebrand factor type A; Vault protein inter-alpha-trypsin domain protein; SMART: Vault protein inter-alpha-trypsin, metazoa; KEGG: bja:bll0977 hypothetical protein
YP_001638873.1	PFAM: Phosphoglycerate mutase; KEGG: acr:Acry_0137 phosphoglycerate mutase
YP_001638875.1	PFAM: high-affinity nickel-transporter; KEGG: rpe:RPE_4806 high-affinity nickel-transporter
YP_001638876.1	PFAM: protein of unknown function DUF1007; KEGG: rpa:RPA0873 hypothetical protein
YP_001638877.1	PFAM: cytochrome C biogenesis protein; KEGG: xau:Xaut_1658 cytochrome c biogenesis protein
YP_001638878.1	PFAM: cytochrome c assembly protein; KEGG: ret:RHE_CH01291 cytochrome-C-type synthesis protein
YP_001638879.1	PFAM: CcmE/CycJ protein; KEGG: rpe:RPE_1933 CcmE/CycJ protein
YP_001638880.1	KEGG: rpe:RPE_1932 tetratricopeptide TPR_2; TIGRFAM: cytochrome c-type biogenesis protein CcmI; PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein
YP_001638881.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bra:BRADO2729 putative two-component sensor histidine kinase
YP_001638882.1	KEGG: rpc:RPC_1461 hypothetical protein
YP_001638883.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bja:blr3121 two-component response regulator
YP_001638888.1	PFAM: glycoside hydrolase family 24; KEGG: bbk:BARBAKC583_0240 phage lysozyme
YP_001638889.1	KEGG: pde:Pden_3078 hypothetical protein
YP_001638890.1	KEGG: nha:Nham_1426 gene transfer agent (GTA) orfg15, like protein
YP_001638891.1	TIGRFAM: phage cell wall peptidase, NlpC/P60 family; KEGG: nha:Nham_1425 putative phage cell wall peptidase, NlpC/P60
YP_001638892.1	PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_1179 hypothetical protein
YP_001638893.1	PFAM: conserved hypothetical protein; KEGG: rpc:RPC_1821 hypothetical protein
YP_001638894.1	KEGG: xau:Xaut_3164 gene transfer agent (GTA) orfg11
YP_001638895.1	KEGG: xau:Xaut_3163 phage conserved hypothetical protein
YP_001638896.1	KEGG: rpd:RPD_1984 gene transfer agent (GTA) orfg10
YP_001638897.1	TIGRFAM: phage major tail protein, TP901-1 family; KEGG: rpc:RPC_1816 phage major tail protein, TP901-1
YP_001638898.1	KEGG: rpa:RPA1898 homologue of rhodobacter capsulatus gene transfer agent (GTA) orfg8 (32% identity)
YP_001638899.1	TIGRFAM: phage head-tail adaptor; KEGG: pla:Plav_0909 phage head-tail adaptor, putative
YP_001638900.1	KEGG: rpe:RPE_1914 phiE125 gp8 family protein
YP_001638901.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: rpb:RPB_3469 peptidase S1 and S6, chymotrypsin/Hap
YP_001638902.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: xau:Xaut_3157 peptidase S1 and S6 chymotrypsin/Hap
YP_001638903.1	TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: rpd:RPD_1970 phage major capsid protein, HK97
YP_001638904.1	TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: bov:BOV_0589 caudovirus prohead protease
YP_001638905.1	TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: rpc:RPC_1801 phage portal protein, HK97
YP_001638906.1	PFAM: protein of unknown function DUF264; KEGG: xau:Xaut_3147 protein of unknown function DUF264
YP_001638907.1	TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rpe:RPE_2223 precorrin-3B C17-methyltransferase
YP_001638908.1	TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bra:BRADO4904 precorrin-2 C(20)-methyltransferase
YP_001638909.1	PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: bra:BRADO4905 precorrin-8X methylmutase
YP_001638910.1	TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: xau:Xaut_3285 precorrin-3B synthase
YP_001638911.1	with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism
YP_001638912.1	KEGG: xcb:XC_1486 hypothetical protein
YP_001638913.1	TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bbt:BBta_3143 putative cobalamin synthesis protein CobW
YP_001638914.1	PFAM: protein of unknown function DUF1636; KEGG: sit:TM1040_2208 protein of unknown function DUF1636
YP_001638915.1	TIGRFAM: cobalt transporter, subunit CbtA; PFAM: Cobalt transporter subunit CbtA putative; KEGG: oan:Oant_1874 cobalt transporter, subunit CbtA
YP_001638916.1	TIGRFAM: cobalt transporter, subunit CbtB; PFAM: Cobalt transporter subunit CbtB putative; KEGG: xau:Xaut_3774 cobalt transporter, subunit CbtB
YP_001638917.1	PFAM: Protein of unknown function DUF1772; KEGG: xau:Xaut_3066 protein of unknown function DUF1772
YP_001638918.1	PFAM: regulatory protein MarR; KEGG: rso:RSc1851 putative transcription regulator protein
YP_001638919.1	PFAM: cobalbumin biosynthesis protein; KEGG: mlo:mll1308 cobinamide kinase
YP_001638920.1	KEGG: mlo:mll1306 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
YP_001638921.1	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle
YP_001638922.1	TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: xau:Xaut_1627 formaldehyde-activating enzyme (Fae)
YP_001638925.1	PFAM: alpha/beta hydrolase fold; KEGG: bja:blr0418 putative epoxide hydrolase
YP_001638926.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mag:amb3804 methyl-accepting chemotaxis protein
YP_001638927.1	KEGG: nha:Nham_0235 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001638928.1	KEGG: nha:Nham_3254 hypothetical protein
YP_001638929.1	TIGRFAM: conserved hypothetical membrane protein; KEGG: bja:bll2463 hypothetical protein
YP_001638930.1	PFAM: protein of unknown function DUF58; KEGG: nwi:Nwi_2627 hypothetical protein
YP_001638931.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: xau:Xaut_2948 ATPase associated with various cellular activities AAA_3
YP_001638932.1	PFAM: thioesterase superfamily protein; KEGG: rpb:RPB_4340 thioesterase superfamily
YP_001638933.1	PFAM: protein of unknown function DUF1285; KEGG: bja:blr2466 hypothetical protein
YP_001638934.1	PFAM: NUDIX hydrolase; KEGG: xau:Xaut_2950 NUDIX hydrolase
YP_001638935.1	KEGG: bra:BRADO1967 hypothetical protein
YP_001638936.1	PFAM: Polynucleotide adenylyltransferase region; KEGG: xau:Xaut_2952 polynucleotide adenylyltransferase region
YP_001638937.1	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane
YP_001638938.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_001638939.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
YP_001638940.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_001638941.1	TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: rpb:RPB_0268 ATP synthase F1, delta subunit
YP_001638942.1	PFAM: ferrochelatase; KEGG: xau:Xaut_2814 ferrochelatase
YP_001638943.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sru:SRU_0996 hypothetical protein
YP_001638944.1	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: mag:amb3606 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterase
YP_001638945.1	PFAM: Uracil-DNA glycosylase superfamily; KEGG: pde:Pden_2138 uracil-DNA glycosylase
YP_001638946.1	SMART: Rhodanese domain protein; KEGG: bja:blr5051 superoxide dismutase SodM-like protein
YP_001638947.1	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: bja:blr5052 putative chromate transport protein
YP_001638949.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xau:Xaut_3112 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_001638950.1	TIGRFAM: preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: xau:Xaut_0512 preprotein translocase, SecA subunit
YP_001638951.1	PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mlr4407 hypothetical protein
YP_001638952.1	PFAM: beta-lactamase; KEGG: msm:MSMEG_3978 beta-lactamase
YP_001638953.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: rpc:RPC_3373 4'-phosphopantetheinyl transferase
YP_001638954.1	PFAM: NUDIX hydrolase; KEGG: ret:RHE_CH01183 hypothetical protein
YP_001638955.1	TIGRFAM: esterase, PHB depolymerase family; KEGG: bbt:BBta_5379 putative esterase, PHB depolymerase
YP_001638956.1	KEGG: nha:Nham_4274 putative transcriptional regulator, CopG family
YP_001638957.1	KEGG: nwi:Nwi_0105 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease
YP_001638958.1	PFAM: protein of unknown function DUF497; KEGG: vei:Veis_2884 protein of unknown function DUF497
YP_001638959.1	SMART: helix-turn-helix domain protein; KEGG: sus:Acid_7034 hypothetical protein
YP_001638960.1	KEGG: mlo:mlr4493 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase
YP_001638961.1	TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: mes:Meso_3480 shikimate 5-dehydrogenase
YP_001638962.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rpe:RPE_0509 cation diffusion facilitator family transporter
YP_001638963.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: nwi:Nwi_0103 Maf-like protein
YP_001638964.1	KEGG: acr:Acry_0382 capsular polysaccharide biosynthesis protein-like protein
YP_001638965.1	PFAM: protein of unknown function DUF299; KEGG: xau:Xaut_1827 protein of unknown function DUF299
YP_001638966.1	KEGG: bra:BRADO1875 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D)
YP_001638967.1	PFAM: conserved hypothetical protein; KEGG: bja:bll0636 hypothetical protein
YP_001638968.1	KEGG: ret:RHE_CH01705 hypothetical protein
YP_001638969.1	long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors
YP_001638970.1	May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
YP_001638971.1	TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: xau:Xaut_1844 HAD-superfamily hydrolase, subfamily IIA
YP_001638972.1	PFAM: regulatory protein TetR; KEGG: sit:TM1040_1583 transcriptional regulator, TetR family
YP_001638973.1	Synthesizes thioester adducts of fatty acids enzymatically to the phosphopantetheine group of acyl carrier protein
YP_001638974.1	PFAM: protein of unknown function DUF1044; KEGG: plu:plu4467 hypothetical protein
YP_001638975.1	KEGG: sme:SMa2151 probable DNA-binding protein
YP_001638976.1	PFAM: DSBA oxidoreductase; KEGG: mes:Meso_4108 DsbA oxidoreductase
YP_001638977.1	PFAM: Rubrerythrin; protein of unknown function DUF125 transmembrane; KEGG: sil:SPO3842 hypothetical protein
YP_001638978.1	KEGG: mpt:Mpe_B0545 carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein
YP_001638979.1	PFAM: molybdopterin biosynthesis MoaE protein; KEGG: mlo:mlr7915 molybdopterin converting factor, subunit 2
YP_001638980.1	PFAM: protein of unknown function UPF0118; KEGG: bja:blr4959 hypothetical protein
YP_001638981.1	malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate
YP_001638982.1	PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: pna:Pnap_3742 VWA containing CoxE family protein
YP_001638983.1	PFAM: ATPase associated with various cellular activities AAA_5; KEGG: rrs:RoseRS_4022 ATPase associated with various cellular activities, AAA_5
YP_001638984.1	PFAM: zinc finger SWIM domain protein; KEGG: rha:RHA1_ro01904 hypothetical protein
YP_001638985.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_001638986.1	TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: sme:SMb20062 hypothetical protein
YP_001638987.1	PFAM: plasmid stabilization system; KEGG: mbb:BCG_1998c hypothetical protein
YP_001638988.1	PFAM: Uracil-DNA glycosylase superfamily; KEGG: mlo:mll0558 hypothetical protein
YP_001638989.1	KEGG: nwi:Nwi_1129 hypothetical protein
YP_001638990.1	type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase
YP_001638991.1	PFAM: protein of unknown function DUF1330; KEGG: acr:Acry_1359 protein of unknown function DUF1330
YP_001638992.1	PFAM: regulatory protein TetR; KEGG: rpa:RPA4413 possible transcriptional regulator, TetR family
YP_001638994.1	TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: sit:TM1040_0461 deoxyuridine 5'-triphosphate nucleotidohydrolase (dut)
YP_001638995.1	PFAM: NUDIX hydrolase; KEGG: oan:Oant_1073 hypothetical protein
YP_001638996.1	PFAM: carbonic anhydrase; KEGG: bpe:BP3425 putative carbonic anhydrase
YP_001638997.1	PFAM: inositol monophosphatase; KEGG: xau:Xaut_3486 3'(2'),5'-bisphosphate nucleotidase
YP_001638998.1	KEGG: xau:Xaut_3487 hypothetical protein
YP_001638999.1	PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: rpc:RPC_3803 CheA signal transduction histidine kinases
YP_001639000.1	PFAM: CheW domain protein; KEGG: rpc:RPC_3802 CheW protein
YP_001639001.1	PFAM: response regulator receiver; KEGG: rpc:RPC_4245 response regulator receiver domain protein (CheY-like)
YP_001639002.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: bra:BRADO1476 chemotaxis response regulator protein CheB-glutamate methylesterase
YP_001639003.1	PFAM: MCP methyltransferase CheR-type; KEGG: bra:BRADO1477 chemotaxis protein methyltransferase
YP_001639004.1	PFAM: Allophanate hydrolase subunit 1; KEGG: rpc:RPC_2624 hypothetical protein
YP_001639005.1	KEGG: rpa:RPA2682 UreA amidolyase-related; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2
YP_001639006.1	KEGG: psa:PST_3212 UV damage repair endonuclease
YP_001639007.1	KEGG: rpd:RPD_0940 hypothetical protein
YP_001639008.1	PFAM: Hypoxia induced protein conserved region; KEGG: nwi:Nwi_0751 hypothetical protein
YP_001639009.1	KEGG: syw:SYNW1403 hypothetical protein
YP_001639010.1	KEGG: pla:Plav_3239 hypothetical protein
YP_001639011.1	TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: oan:Oant_1007 ATP--cobalamin adenosyltransferase
YP_001639012.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: xau:Xaut_2159 electron transfer flavoprotein alpha/beta-subunit
YP_001639013.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: rpd:RPD_0931 electron transfer flavoprotein, alpha subunit
YP_001639014.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: xau:Xaut_2157 3-hydroxybutyryl-CoA dehydrogenase
YP_001639016.1	TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: xau:Xaut_1621 quinone oxidoreductase putative PIG3
YP_001639017.1	KEGG: bra:BRADO3518 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_001639018.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_3446 ISHne3, transposase
YP_001639019.1	KEGG: mes:Meso_2676 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_001639020.1	PFAM: glycosyl transferase family 20; KEGG: smd:Smed_5911 alpha,alpha-trehalose-phosphate synthase (UDP-forming)
YP_001639021.1	KEGG: rsh:Rsph17029_1046 hypothetical protein
YP_001639022.1	KEGG: mes:Meso_3142 protein of unknown function DUF1469
YP_001639024.1	KEGG: rsq:Rsph17025_1892 hypothetical protein
YP_001639025.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_001639026.1	TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: bra:BRADO3024 secretion chaperone CsaA protein
YP_001639027.1	KEGG: pmy:Pmen_2170 hypothetical protein
YP_001639028.1	PFAM: major facilitator superfamily MFS_1; KEGG: rpb:RPB_4332 major facilitator superfamily MFS_1
YP_001639029.1	TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; KEGG: rpa:RPA0302 putative protein-export protein SecB
YP_001639030.1	PFAM: import inner membrane translocase subunit Tim44; KEGG: xau:Xaut_2048 import inner membrane translocase subunit Tim44
YP_001639031.1	PFAM: MltA domain protein; 3D domain protein; KEGG: xau:Xaut_2049 MltA domain protein
YP_001639032.1	PFAM: Smr protein/MutS2; KEGG: bja:blr0644 hypothetical protein
YP_001639033.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_001639034.1	catalyzes the formation of acetate from pyruvate
YP_001639036.1	PFAM: Integral membrane protein TerC; KEGG: pfl:PFL_3996 membrane protein, TerC family
YP_001639037.1	similar to YegS from E. coli
YP_001639038.1	KEGG: zmo:ZMO0488 probable GTP binding protein
YP_001639039.1	KEGG: rru:Rru_A2520 penicillin-binding protein 1A
YP_001639040.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: xcv:XCV4482 acid phosphatase
YP_001639041.1	KEGG: ana:alr3514 hypothetical protein
YP_001639042.1	SMART: helix-turn-helix domain protein; KEGG: cph:Cpha266_0786 putative DNA-binding protein
YP_001639043.1	KEGG: pla:Plav_1954 RelE-like cytotoxic translational repressor of toxin-antitoxin stability system
YP_001639044.1	KEGG: pla:Plav_0267 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; PFAM: transferase hexapeptide repeat containing protein
YP_001639045.1	PFAM: cyclic nucleotide-binding; KEGG: rpd:RPD_0441 cyclic nucleotide-binding
YP_001639046.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mes:Meso_3424 two component transcriptional regulator, winged helix family
YP_001639047.1	KEGG: xau:Xaut_1770 hypothetical protein
YP_001639048.1	PFAM: alanine racemase domain protein; KEGG: xau:Xaut_0278 alanine racemase domain protein
YP_001639049.1	TIGRFAM: leucyl-tRNA synthetase; KEGG: rpc:RPC_0284 leucyl-tRNA synthetase
YP_001639050.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_001639051.1	TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; KEGG: mba:Mbar_A0404 hypothetical protein
YP_001639053.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_001639054.1	TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: xau:Xaut_1835 glucose inhibited division protein
YP_001639055.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: xau:Xaut_1836 cobyrinic acid ac-diamide synthase
YP_001639056.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: mlo:mll4477 chromosome partitioning protein, ParB
YP_001639057.1	required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA
YP_001639058.1	KEGG: rpb:RPB_0386 hypothetical protein
YP_001639060.1	KEGG: xau:Xaut_0016 hypothetical protein
YP_001639061.1	KEGG: swi:Swit_4855 protein of unknown function DUF23
YP_001639062.1	PFAM: Prephenate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: xau:Xaut_0393 arogenate dehydrogenase
YP_001639063.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
YP_001639065.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bja:bll4920 ferrichrome iron receptor
YP_001639066.1	PFAM: K potassium transporter; KEGG: bbt:BBta_3513 low affinity potassium transporter (Kup family)
YP_001639067.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_001639068.1	PFAM: Patatin; KEGG: xau:Xaut_1886 patatin
YP_001639069.1	PFAM: regulatory protein ArsR; UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: xau:Xaut_2830 methyltransferase type 11
YP_001639070.1	KEGG: xau:Xaut_2831 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase
YP_001639071.1	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity
YP_001639073.1	KEGG: bra:BRADO4228 conserved hypothetical protein; putative acyl-CoA N-acyltransferase related protein
YP_001639074.1	PFAM: polysaccharide deacetylase; KEGG: bbt:BBta_0752 putative polysaccharide deacetylase
YP_001639076.1	KEGG: rpa:RPA2757 hypothetical protein
YP_001639077.1	PFAM: cytochrome oxidase assembly; KEGG: xau:Xaut_4338 cytochrome oxidase assembly
YP_001639078.1	PFAM: Hly-III family protein; KEGG: rpa:RPA1585 putative hemmolysin III, HlyIII family
YP_001639080.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_001639082.1	PFAM: flagellar FlaF family protein; KEGG: nwi:Nwi_1106 putative flagellar protein FlaF
YP_001639085.1	PFAM: metallophosphoesterase; KEGG: sme:SMb20398 hypothetical protein
YP_001639086.1	TIGRFAM: TonB family protein; KEGG: rpe:RPE_0962 TonB family protein
YP_001639087.1	TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rru:Rru_A2154 biopolymer transport protein ExbD/TolR
YP_001639088.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: rru:Rru_A2155 MotA/TolQ/ExbB proton channel
YP_001639089.1	KEGG: mlo:mlr1156 hypothetical protein
YP_001639090.1	PFAM: heat shock protein Hsp20; KEGG: rpa:RPA0054 putative small heat shock protein
YP_001639091.1	PFAM: protein of unknown function DUF1150; KEGG: xau:Xaut_2033 protein of unknown function DUF1150
YP_001639092.1	KEGG: rpb:RPB_0067 hypothetical protein
YP_001639093.1	PFAM: glycosyl transferase group 1; KEGG: pla:Plav_0205 glycosyl transferase group 1
YP_001639094.1	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits
YP_001639095.1	PFAM: Amylo-alpha-16-glucosidase; KEGG: bra:BRADO2429 hypothetical protein
YP_001639096.1	PFAM: glycosyl transferase group 1; KEGG: mes:Meso_3692 glycosyl transferase, group 1
YP_001639097.1	PFAM: ribosomal protein L35; KEGG: bra:BRADO0137 50S ribosomal protein L35
YP_001639098.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_001639099.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_001639100.1	KEGG: bbt:BBta_0212 phenylalanyl-tRNA synthetase beta chain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit
YP_001639101.1	PFAM: SEC-C motif domain protein; KEGG: sus:Acid_0028 protein of unknown function DUF1186
YP_001639102.1	PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: bja:blr0765 molybdopterin biosynthesis protein
YP_001639103.1	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.
YP_001639104.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_001639105.1	TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: rpe:RPE_0655 methionyl-tRNA formyltransferase
YP_001639106.1	KEGG: bra:BRADO0770 peptide deformylase (PDF) (polypeptide deformylase); TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_001639107.1	KEGG: cte:CT0439 hypothetical protein
YP_001639108.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_001639109.1	PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP
YP_001639110.1	TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: xau:Xaut_0398 radical SAM enzyme, Cfr family
YP_001639111.1	PFAM: shikimate kinase; 3-dehydroquinate synthase; KEGG: bra:BRADO0609 bifunctional: shikimate kinase (N-terminal); dehydroquinate synthase (C-terminal)
YP_001639112.1	PFAM: regulatory protein TetR; KEGG: bbt:BBta_5351 putative transcriptional regulatory protein, TetR family
YP_001639113.1	TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase; KEGG: bme:BMEI0137 malate dehydrogenase
YP_001639114.1	KEGG: rpe:RPE_0299 succinyl-CoA synthetase, beta subunit; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein
YP_001639115.1	TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: bbt:BBta_0394 succinyl-CoA synthetase, alpha subunit, NAD(P)-binding
YP_001639116.1	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide
YP_001639117.1	TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: xau:Xaut_0158 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
YP_001639118.1	Catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_001639119.1	KEGG: bra:BRADO6651 putative sensor histidine kinase with PAS/PAC and response regulator receiver domains; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001639120.1	KEGG: bbr:BB0701 hypothetical protein
YP_001639121.1	PFAM: Sarcosine oxidase gamma subunit; KEGG: xau:Xaut_4703 sarcosine oxidase gamma subunit
YP_001639122.1	TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: bra:BRADO5880 sarcosine oxidase, alpha subunit
YP_001639123.1	PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: xau:Xaut_4701 sarcosine oxidase delta subunit heterotetrameric
YP_001639124.1	TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: bbt:BBta_1949 sarcosine oxidase, beta subunit
YP_001639125.1	PFAM: ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bra:BRADO5877 putative bifunctional protein with a transcriptional regulator AraC/XylS family domain and a class I glutamine amidotransferase-like domain
YP_001639126.1	PFAM: glutamine amidotransferase class-II; KEGG: bbt:BBta_1942 putative glutamine amidotransferase GATase, classII
YP_001639127.1	PFAM: glutamate synthase alpha subunit domain protein; KEGG: gbe:GbCGDNIH1_2112 glutamate synthase family protein
YP_001639128.1	PFAM: dihydroorotate dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: azo:azo3013 glutamate synthase, large subunit
YP_001639129.1	TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region; KEGG: bbt:BBta_1945 glutamine synthetase I
YP_001639130.1	KEGG: rpd:RPD_0711 hypothetical protein
YP_001639131.1	KEGG: smd:Smed_6258 transposase and inactivated derivatives-like protein
YP_001639132.1	PFAM: Hemolysin-type calcium-binding region; Animal haem peroxidase; KEGG: rpd:RPD_1560 animal haem peroxidase
YP_001639133.1	KEGG: mes:Meso_0792 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001639134.1	PFAM: Hemolysin-type calcium-binding region; KEGG: mes:Meso_0793 hemolysin-type calcium-binding region
YP_001639135.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: mes:Meso_0794 type I secretion membrane fusion protein, HlyD family
YP_001639136.1	KEGG: rsp:RSP_4193 hypothetical protein
YP_001639137.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rpa:RPA1490 bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB4
YP_001639138.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rpd:RPD_3789 response regulator receiver
YP_001639139.1	KEGG: bur:Bcep18194_C6578 esterase/lipase-like protein
YP_001639140.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pol:Bpro_3929 UbiE/COQ5 methyltransferase
YP_001639141.1	PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ava:Ava_4696 GAF sensor hybrid histidine kinase
YP_001639142.1	KEGG: mlo:mll2384 probable sensor/response regulator hybrid protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein
YP_001639143.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; TrkA-N domain protein; NmrA family protein; Male sterility domain; KEGG: rle:RL1205 hypothetical protein
YP_001639144.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL1204 putative LysR family transcriptional regulator
YP_001639145.1	PFAM: luciferase family protein; KEGG: rle:RL2299 putative bacterial luciferase family oxidoreductase
YP_001639146.1	PFAM: DoxX family protein; KEGG: jan:Jann_0759 hypothetical protein
YP_001639147.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_4296 transcriptional regulator, LysR family
YP_001639148.1	PFAM: isochorismatase hydrolase; KEGG: rle:RL0306 putative isochorismatase family protein
YP_001639149.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mgi:Mflv_2124 alcohol dehydrogenase, zinc-binding domain protein
YP_001639150.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B2516 transcriptional regulator, LysR-family
YP_001639151.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rle:RL1211 hypothetical protein
YP_001639152.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpd:RPD_4246 ErfK/YbiS/YcfS/YnhG
YP_001639153.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_2757 transcriptional regulator, LysR family
YP_001639154.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bxe:Bxe_A2683 hypothetical protein
YP_001639155.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: acr:Acry_2974 cupin 2, conserved barrel domain protein
YP_001639156.1	KEGG: ang:An12g09540 hypothetical protein Pfam: MRJP SGL
YP_001639157.1	KEGG: mlo:mlr7750 alginate lyase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein
YP_001639158.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: rru:Rru_A0215 protein of unknown function DUF6, transmembrane
YP_001639159.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: xom:XOO_1775 sensor histidine kinase
YP_001639160.1	TIGRFAM: autotransporter-associated beta strand repeat protein; PFAM: Amidase; KEGG: mxa:MXAN_3566 amidase
YP_001639161.1	TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: xau:Xaut_3292 uracil-xanthine permease
YP_001639162.1	KEGG: xau:Xaut_4655 hypothetical protein
YP_001639163.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
YP_001639165.1	PFAM: isochorismatase hydrolase; KEGG: rpb:RPB_1017 isochorismatase hydrolase
YP_001639166.1	KEGG: bra:BRADO1748 conserved hypothetical protein; putative signal peptide
YP_001639167.1	catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.
YP_001639168.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO1747 putative ABC transporter (ATP-binding protein)
YP_001639169.1	PFAM: inner-membrane translocator; KEGG: rpa:RPA4576 putative permease protein of sugar ABC transporter
YP_001639170.1	PFAM: inner-membrane translocator; KEGG: bbt:BBta_2058 putative ABC transporter (permease protein)
YP_001639171.1	PFAM: basic membrane lipoprotein; KEGG: mlo:mlr7061 hypothetical protein
YP_001639172.1	PFAM: inner-membrane translocator; KEGG: mlo:mlr7062 sugar ABC transporter, permease protein
YP_001639173.1	PFAM: inner-membrane translocator; KEGG: mlo:mlr7063 sugar ABC transporter, permease protein
YP_001639174.1	formamide amidohydrolase; catalyzes the hydrolysis of formamide to formate
YP_001639175.1	PFAM: isochorismatase hydrolase; KEGG: bja:blr6151 hypothetical isochorismatase family protein
YP_001639176.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PE00111 probable sugar ABC transporter, ATP-binding protein
YP_001639177.1	PFAM: protein of unknown function DUF81; KEGG: sdn:Sden_2780 protein of unknown function DUF81
YP_001639178.1	PFAM: basic membrane lipoprotein; KEGG: bbt:BBta_2057 putative ABC transporter (substrate-binding protein)
YP_001639181.1	PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: cya:CYA_1044 X-Pro dipeptidyl-peptidase (S15 family)
YP_001639182.1	PFAM: Creatininase; KEGG: bbt:BBta_1271 hypothetical protein
YP_001639183.1	PFAM: AMP-dependent synthetase and ligase; KEGG: mta:Moth_0503 AMP-dependent synthetase and ligase
YP_001639184.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bbt:BBta_1267 putative NAD(P)H dehydrogenase (quinone) protein
YP_001639185.1	PFAM: FAD linked oxidase domain protein; KEGG: bbt:BBta_1268 hypothetical protein
YP_001639186.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: cya:CYA_0699 oxidoreductase, 2OG-Fe(II) oxygenase family
YP_001639187.1	PFAM: NMT1/THI5 like domain protein; KEGG: ter:Tery_0706 putative secreted protein
YP_001639188.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: bbt:BBta_1261 hypothetical protein
YP_001639189.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_1263 putative ABC transporter, permease protein
YP_001639190.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_1264 putative ABC transporter, ATP-binding protein
YP_001639191.1	PFAM: NMT1/THI5 like domain protein; KEGG: bxe:Bxe_A2012 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein
YP_001639192.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:pRL110610 putative LysR family transcriptional regulator
YP_001639193.1	Catalyzes the deamination of cytosine to uracil and ammonia
YP_001639196.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_2371 transcriptional regulator, LysR family
YP_001639197.1	TIGRFAM: guanine deaminase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: gox:GOX0898 guanine deaminase
YP_001639198.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bbt:BBta_2048 putative xanthine dehydrogenase family protein
YP_001639199.1	PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bra:BRADO1737 conserved hypothetical protein; putative oxidoreductase (FAD binding)
YP_001639200.1	PFAM: NMT1/THI5 like domain protein; KEGG: bbt:BBta_6030 putative ABC transporter, substrate binding protein
YP_001639201.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL3722 putative transmembrane component of ABC transporter
YP_001639202.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01825 putative permease ABC transporter protein
YP_001639203.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_6033 putative ABC transporter, ATP-binding protein
YP_001639204.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: atc:AGR_C_4534 putative flavin reductase
YP_001639205.1	PFAM: alpha/beta hydrolase fold; KEGG: psp:PSPPH_1045 hydrolase, alpha/beta fold family
YP_001639206.1	PFAM: Endoribonuclease L-PSP; KEGG: spe:Spro_1821 endoribonuclease L-PSP
YP_001639207.1	PFAM: isochorismatase hydrolase; KEGG: esa:ESA_02363 hypothetical protein
YP_001639208.1	PFAM: luciferase family protein; KEGG: psa:PST_3597 bacterial luciferase family protein
YP_001639209.1	PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: esa:ESA_02360 hypothetical protein
YP_001639210.1	catalyzes the formation of glyoxylate from (S)-ureidoglycolate
YP_001639211.1	TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: rpa:RPA0553 hypothetical protein
YP_001639212.1	PFAM: protein of unknown function DUF989; KEGG: xau:Xaut_3294 protein of unknown function DUF989
YP_001639213.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_3293 transcriptional regulator, LysR family
YP_001639214.1	KEGG: xau:Xaut_3290 chitin deacetylase; TIGRFAM: OHCU decarboxylase; urate catabolism protein; PFAM: polysaccharide deacetylase
YP_001639215.1	TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: mes:Meso_2832 transthyretin
YP_001639216.1	PFAM: protein of unknown function DUF808; KEGG: rle:RL2395 putative transmembrane protein
YP_001639217.1	PFAM: EAL domain protein; KEGG: bja:blr0364 hypothetical protein
YP_001639218.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rru:Rru_A2567 putative diguanylate cyclase (GGDEF domain)
YP_001639219.1	PFAM: OmpW family protein; KEGG: acr:Acry_1957 OmpW family protein
YP_001639224.1	KEGG: pde:Pden_0660 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_001639225.1	PFAM: aminoglycoside phosphotransferase; KEGG: swi:Swit_0048 aminoglycoside phosphotransferase
YP_001639226.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: xau:Xaut_0019 phospholipid/glycerol acyltransferase
YP_001639227.1	PFAM: protein of unknown function DUF497; KEGG: rpd:RPD_3974 protein of unknown function DUF497
YP_001639228.1	KEGG: dvl:Dvul_1491 hypothetical protein
YP_001639229.1	TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: bbt:BBta_1187 putative methionine biosynthesis protein (MetW)
YP_001639230.1	KEGG: mlo:mlr3538 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold
YP_001639231.1	TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: bbt:BBta_5538 peptide methionine sulfoxide reductase MsrB
YP_001639232.1	TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: bja:blr7043 peptide methionine sulfoxide reductase
YP_001639233.1	TIGRFAM: bacterioferritin; PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: bbt:BBta_6242 bacterioferritin (iron storage homoprotein)
YP_001639234.1	KEGG: bbt:BBta_6243 putative bacterioferritin-associated ferredoxin
YP_001639235.1	PFAM: UspA domain protein; KEGG: rru:Rru_A2612 UspA
YP_001639236.1	PFAM: acyltransferase 3; KEGG: mlo:mlr6758 exopolysaccharide biosynthesis protein
YP_001639237.1	KEGG: psa:PST_1217 predicted outer membrane protein
YP_001639238.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: atc:AGR_C_1309 hypothetical protein
YP_001639239.1	KEGG: sme:SMc00865 hypothetical protein
YP_001639241.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
YP_001639242.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
YP_001639243.1	PFAM: Thioredoxin domain; KEGG: bra:BRADO6716 putative thioredoxin (H-type,TRX-H)
YP_001639244.1	KEGG: pde:Pden_0023 rhodanese
YP_001639245.1	PFAM: Sulphur oxidation protein SoxZ; KEGG: gbe:GbCGDNIH1_2319 hypothetical secreted protein
YP_001639246.1	PFAM: beta-lactamase domain protein; KEGG: gbe:GbCGDNIH1_0107 beta-lactamase
YP_001639247.1	PFAM: regulatory protein TetR; KEGG: pst:PSPTO_4267 transcriptional regulator, TetR family
YP_001639248.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bja:bll7768 hypothetical protein
YP_001639251.1	KEGG: bja:blr4975 hypothetical protein
YP_001639252.1	KEGG: mag:amb1110 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001639253.1	PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: xau:Xaut_4117 protein of unknown function DUF463 YcjX family protein
YP_001639254.1	PFAM: conserved hypothetical protein; KEGG: mlo:mlr0776 hypothetical protein
YP_001639255.1	KEGG: yli:YALI0F00990g hypothetical protein
YP_001639256.1	PFAM: protein of unknown function DUF1234; KEGG: xau:Xaut_2551 protein of unknown function DUF1234
YP_001639257.1	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: xau:Xaut_1740 diaminopimelate decarboxylase
YP_001639260.1	KEGG: bbt:BBta_6565 hypothetical protein
YP_001639261.1	PFAM: conserved hypothetical protein; KEGG: xau:Xaut_3485 hypothetical protein
YP_001639262.1	PFAM: ribonuclease HII/HIII; KEGG: mag:amb3989 ribonuclease HII
YP_001639263.1	PFAM: glycosyl transferase group 1; KEGG: bja:bll8163 glycosyl transferase
YP_001639264.1	PFAM: metallophosphoesterase; KEGG: xau:Xaut_4108 metallophosphoesterase
YP_001639265.1	PFAM: aminotransferase class V; KEGG: gbe:GbCGDNIH1_0048 serine--glyoxylate aminotransferase
YP_001639266.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: gbe:GbCGDNIH1_0049 glycerate dehydrogenase
YP_001639267.1	PFAM: Methylene-tetrahydromethanopterin dehydrogenase; KEGG: gbe:GbCGDNIH1_0050 methylenetetrahydrofolate dehydrogenase (NADP+)
YP_001639268.1	PFAM: Formiminotransferase-cyclodeaminase; KEGG: gbe:GbCGDNIH1_0051 methenyltetrahydrofolate cyclohydrolase
YP_001639269.1	catalyzes the formation of malyl-CoA from malate and CoA
YP_001639270.1	Catalyzes the only substrate-level phosphorylation in the TCA cycle
YP_001639271.1	PFAM: phosphoenolpyruvate carboxylase; KEGG: gbe:GbCGDNIH1_0054 phosphoenolpyruvate carboxylase
YP_001639272.1	PFAM: HpcH/HpaI aldolase; KEGG: gbe:GbCGDNIH1_0055 malyl-CoA lyase
YP_001639273.1	PFAM: protein of unknown function DUF1003; KEGG: mes:Meso_1875 protein of unknown function DUF1003
YP_001639274.1	PFAM: dienelactone hydrolase; KEGG: gvi:glr3401 probable carboxymethylenebutenolidase
YP_001639275.1	PFAM: transcriptional coactivator/pterin dehydratase; KEGG: gbe:GbCGDNIH1_0777 pterin-4-alpha-carbinolamine dehydratase
YP_001639276.1	KEGG: xau:Xaut_1785 putative ABC transporter periplasmic solute-binding protein
YP_001639277.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_1784 binding-protein-dependent transport systems inner membrane component
YP_001639278.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_1783 ABC transporter related
YP_001639279.1	TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: xau:Xaut_1781 pyrrolo-quinoline quinone
YP_001639280.1	KEGG: bbt:BBta_5969 putative cytochrome c protein
YP_001639281.1	SMART: extracellular solute-binding protein family 3; KEGG: xau:Xaut_1779 extracellular solute-binding protein family 3
YP_001639282.1	KEGG: mes:Meso_1414 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK
YP_001639283.1	TIGRFAM: dihydroneopterin aldolase; KEGG: gtn:GTNG_0070 dihydroneopterin aldolase
YP_001639284.1	KEGG: bbt:BBta_3026 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS
YP_001639285.1	KEGG: xau:Xaut_1797 hypothetical protein
YP_001639286.1	KEGG: xau:Xaut_1798 hypothetical protein
YP_001639287.1	TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; KEGG: xau:Xaut_1799 coenzyme PQQ biosynthesis protein E
YP_001639288.1	Required in the synthesis of PPQ, but its exact function is unknown
YP_001639289.1	possibly involved in transport of pyrroloquinoline quinone transport
YP_001639290.1	PFAM: coenzyme PQQ biosynthesis protein A
YP_001639291.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xau:Xaut_1803 two component transcriptional regulator, winged helix family
YP_001639292.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: xau:Xaut_1804 integral membrane sensor signal transduction histidine kinase
YP_001639293.1	KEGG: xau:Xaut_0033 hypothetical protein
YP_001639294.1	TIGRFAM: formylmethanofuran dehydrogenase subunit C; PFAM: glutamate synthase alpha subunit domain protein; KEGG: gbe:GbCGDNIH1_0781 tungsten-containing formylmethanofuran dehydrogenase, subunit C
YP_001639295.1	catalyzes the transfer of a formyl group from formylmethanofuran to tetrahydromethanopterin tetrahydromethanopterin
YP_001639296.1	TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3; KEGG: gbe:GbCGDNIH1_0779 tungsten-containing formylmethanofuran dehydrogenase, subunit A
YP_001639297.1	KEGG: gbe:GbCGDNIH1_0778 tungsten-containing formylmethanofuran dehydrogenase, subunit B
YP_001639298.1	TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: mca:MCA2861 kinase, GHMP family, putative
YP_001639299.1	PFAM: Methylene-tetrahydromethanopterin dehydrogenase; KEGG: gbe:GbCGDNIH1_0775 methylenetetrahydromethanopterin dehydrogenase (NAD+/NADP+)
YP_001639300.1	PFAM: protein of unknown function DUF201; KEGG: xau:Xaut_3534 protein of unknown function DUF201
YP_001639301.1	catalyzes the reversible formation of methenyl-H(4)methanopterin from N(5)-formyl-H(4)methanopterin
YP_001639302.1	TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: gbe:GbCGDNIH1_0772 ribosomal protein S6 modification protein
YP_001639303.1	PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: mfa:Mfla_1656 triphosphoribosyl-dephospho-CoA protein
YP_001639304.1	TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: xau:Xaut_0032 formaldehyde-activating enzyme (Fae)
YP_001639305.1	PFAM: histidine biosynthesis protein; KEGG: xau:Xaut_3531 histidine biosynthesis protein
YP_001639306.1	TIGRFAM: H4MPT-linked C1 transfer pathway protein; PFAM: Hydantoinase/oxoprolinase; KEGG: gbe:GbCGDNIH1_0768 hydantoinase/oxoprolinase family protein
YP_001639308.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: bbt:BBta_4384 putative exported protein of unknown function
YP_001639309.1	KEGG: bra:BRADO4013 conserved hypothetical protein; putative signal peptide
YP_001639310.1	KEGG: xau:Xaut_0030 putative exported protein of unknown function
YP_001639311.1	KEGG: gbe:GbCGDNIH1_0766 hypothetical protein
YP_001639312.1	PFAM: dihydropteroate synthase DHPS; KEGG: gbe:GbCGDNIH1_0765 dihydropteroate synthase
YP_001639313.1	PFAM: aspartate/glutamate/uridylate kinase; KEGG: xau:Xaut_4102 amino acid kinase family protein
YP_001639314.1	KEGG: noc:Noc_0020 hypothetical protein
YP_001639315.1	KEGG: xau:Xaut_0029 hypothetical protein
YP_001639316.1	KEGG: xau:Xaut_0028 putative exported protein of unknown function
YP_001639317.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: xau:Xaut_0027 40-residue YVTN family beta-propeller repeat protein
YP_001639318.1	KEGG: pmy:Pmen_1949 hypothetical protein
YP_001639320.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pde:Pden_0029 ABC transporter related
YP_001639321.1	PFAM: ABC-2 type transporter; KEGG: xau:Xaut_0025 ABC-2 type transporter
YP_001639322.1	KEGG: xau:Xaut_0024 hypothetical protein
YP_001639323.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gbe:GbCGDNIH1_1908 probable TonB-dependent receptor YncD precursor
YP_001639324.1	KEGG: rpe:RPE_4188 hypothetical protein
YP_001639326.1	TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: rpa:RPA2750 probable glycosyl transferase
YP_001639327.1	PFAM: glycosyl transferase group 1; KEGG: nwi:Nwi_1413 glycosyl transferase, group 1
YP_001639328.1	PFAM: polysaccharide export protein; KEGG: rpb:RPB_4708 polysaccharide export protein
YP_001639329.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: rpe:RPE_2845 lipopolysaccharide biosynthesis
YP_001639330.1	PFAM: conserved hypothetical protein; KEGG: atc:AGR_C_145 hypothetical protein
YP_001639331.1	KEGG: bja:bll8116 DNA polymerase III tau subunit; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase
YP_001639332.1	KEGG: hch:HCH_03671 hypothetical protein
YP_001639333.1	KEGG: bov:BOV_1568 hypothetical protein
YP_001639334.1	PFAM: integrase family protein; KEGG: mes:Meso_3806 phage integrase
YP_001639335.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rpc:RPC_1770 cytidine/deoxycytidylate deaminase, zinc-binding region
YP_001639343.1	PFAM: DnaB domain protein helicase domain protein; KEGG: rpe:RPE_3317 replicative DNA helicase
YP_001639344.1	PFAM: protein of unknown function DUF1376; KEGG: mlo:mll2129 hypothetical protein
YP_001639345.1	KEGG: xau:Xaut_3435 hypothetical protein
YP_001639346.1	KEGG: nha:Nham_2842 hypothetical protein
YP_001639350.1	PFAM: regulatory protein Crp; KEGG: bbt:BBta_0252 putative transcriptional regulator with a cAMP-binding domain-like, Crp/Fnr family
YP_001639351.1	KEGG: ccr:CC_0836 sensor histidine kinase, putative; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001639352.1	PFAM: response regulator receiver; KEGG: rpb:RPB_4041 response regulator receiver domain protein
YP_001639353.1	KEGG: mms:mma_2325 hypothetical protein
YP_001639354.1	PFAM: protein of unknown function DUF937; KEGG: nha:Nham_3880 protein of unknown function DUF937
YP_001639355.1	KEGG: smd:Smed_5683 conserved hypothetical membrane spanning protein
YP_001639357.1	PFAM: protein of unknown function DUF1452; KEGG: nwi:Nwi_1145 protein of unknown function DUF1452
YP_001639358.1	KEGG: mlo:mlr8083 two-component, sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001639359.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: rsh:Rsph17029_2967 PAS/PAC sensor hybrid histidine kinase
YP_001639361.1	KEGG: rpa:RPA1404 glutamyl-tRNA(Gln) amidotransferase subunit A
YP_001639362.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ccr:CC_2903 cold-shock domain family protein
YP_001639363.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ret:RHE_PF00130 putative cold shock protein
YP_001639364.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; HWE histidine kinase; histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; KEGG: ccr:CC_0285 sensory box histidine kinase
YP_001639365.1	PFAM: response regulator receiver; KEGG: rpb:RPB_4041 response regulator receiver domain protein
YP_001639366.1	KEGG: mlo:msr8735 hypothetical protein
YP_001639370.1	KEGG: ava:Ava_C0129 transposase
YP_001639371.1	PFAM: Integrase catalytic region; KEGG: rso:RSp1628 ISRSO16-transposase orfB protein
YP_001639372.1	KEGG: smd:Smed_1425 hypothetical protein
YP_001639374.1	KEGG: xau:Xaut_0335 Mg chelatase, subunit ChlI
YP_001639375.1	PFAM: Resolvase domain; Recombinase; KEGG: nha:Nham_0143 recombinase
YP_001639377.1	TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: mpt:Mpe_A1581 NADH oxidoreductase
YP_001639378.1	PFAM: regulatory protein ArsR; KEGG: xau:Xaut_0874 regulatory protein ArsR
YP_001639379.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rpd:RPD_3419 low molecular weight phosphotyrosine protein phosphatase
YP_001639380.1	TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: mes:Meso_0324 arsenate reductase
YP_001639381.1	TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: acr:Acry_2813 arsenical pump membrane protein
YP_001639383.1	KEGG: rme:Rmet_6081 hypothetical protein
YP_001639384.1	KEGG: mes:Meso_4202 transcriptional regulator, ArsR family
YP_001639385.1	KEGG: mlo:mll2164 probable secreted protein
YP_001639386.1	PFAM: major facilitator superfamily MFS_1; KEGG: oan:Oant_3196 major facilitator superfamily MFS_1
YP_001639388.1	KEGG: bam:Bamb_6604 hypothetical protein
YP_001639390.1	SMART: TIR protein; KEGG: noc:Noc_A0023 TIR
YP_001639391.1	KEGG: tme:Tmel_1086 hypothetical protein
YP_001639392.1	PFAM: metallophosphoesterase; KEGG: sme:SMb20398 hypothetical protein
YP_001639393.1	PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bja:bll0661 magnesium chelatase family protein
YP_001639394.1	PFAM: Glutathione S-transferase domain; KEGG: bbt:BBta_3119 putative glutathione S-transferase
YP_001639395.1	PFAM: domain of unknown function DUF1745; KEGG: mlo:mlr1131 hypothetical protein
YP_001639396.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mlo:mlr1132 probable two-component sensor
YP_001639398.1	PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: rpd:RPD_3279 transglutaminase-like cysteine peptidase, BTLCP
YP_001639399.1	PFAM: thioesterase superfamily protein; KEGG: xau:Xaut_2128 thioesterase superfamily protein
YP_001639400.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ccr:CC_2298 carboxylesterase family protein
YP_001639401.1	PFAM: Sporulation domain protein; Lytic transglycosylase catalytic; KEGG: xau:Xaut_3156 lytic transglycosylase catalytic
YP_001639402.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: gbe:GbCGDNIH1_1142 molybdopterin dependent oxidoreductase
YP_001639403.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bra:BRADO1006 putative oligopeptide transport protein (ABC superfamily, atp_bind)
YP_001639404.1	KEGG: ret:RHE_CH00198 phosphopentomutase protein; TIGRFAM: phosphopentomutase; PFAM: metalloenzyme domain protein; Phosphopentomutase domain protein
YP_001639405.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
YP_001639406.1	KEGG: bxe:Bxe_B0032 hypothetical protein
YP_001639407.1	PFAM: DNA/RNA non-specific endonuclease; KEGG: pol:Bpro_5415 DNA/RNA non-specific endonuclease
YP_001639409.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_001639410.1	TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: reu:Reut_B4897 NAD-dependent epimerase/dehydratase:short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase:NmrA-like
YP_001639411.1	TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: rpa:RPA3743 possible phytoene synthase-related protein
YP_001639412.1	TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: rpa:RPA3742 putative poly-isoprenyl transferase
YP_001639413.1	TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; KEGG: rpc:RPC_1719 amine oxidase
YP_001639414.1	KEGG: nha:Nham_2682 squalene cyclase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase
YP_001639415.1	KEGG: mlo:mlr3555 hypothetical protein
YP_001639416.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class I and II; aminotransferase class-III; KEGG: bpl:BURPS1106A_3269 putative 8-amino-7-oxononanoate synthase
YP_001639417.1	PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: sme:SMc02273 fatty acid synthase transmembrane protein
YP_001639418.1	KEGG: xau:Xaut_3551 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase
YP_001639419.1	PFAM: glycosyl transferase family 2; KEGG: bch:Bcen2424_0878 glycosyl transferase, family 2
YP_001639420.1	KEGG: xau:Xaut_3818 hypothetical protein
YP_001639421.1	PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_1247 major facilitator superfamily MFS_1
YP_001639422.1	PFAM: Ethanolamine ammonia lyase large subunit; KEGG: xau:Xaut_4034 ethanolamine ammonia lyase large subunit
YP_001639423.1	PFAM: Ethanolamine ammonia-lyase light chain; KEGG: xau:Xaut_4033 ethanolamine ammonia-lyase
YP_001639424.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_001639425.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: rpa:RPA2862 putative exopolysaccharide regulatory protein ExoR
YP_001639426.1	TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: smd:Smed_1154 exodeoxyribonuclease III Xth
YP_001639427.1	KEGG: pde:Pden_3125 hypothetical protein
YP_001639428.1	PFAM: AMP-dependent synthetase and ligase; KEGG: xau:Xaut_2464 AMP-dependent synthetase and ligase
YP_001639429.1	PFAM: protein of unknown function DUF465; KEGG: nwi:Nwi_1004 protein of unknown function DUF465
YP_001639430.1	PFAM: protein of unknown function DUF465; KEGG: nha:Nham_1238 protein of unknown function DUF465
YP_001639432.1	KEGG: sme:SMc04001 probable phosphoribosylaminoimidazole carboxylase catalytic subunit protein; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_001639433.1	KEGG: xau:Xaut_1255 phosphoribosylaminoimidazole carboxylase, ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
YP_001639434.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: oan:Oant_1392 TPR repeat-containing protein
YP_001639435.1	PFAM: response regulator receiver; KEGG: rpa:RPA2074 response regulator receiver (CheY-like protein)
YP_001639436.1	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese
YP_001639437.1	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine
YP_001639438.1	KEGG: nwi:Nwi_2478 hypothetical protein
YP_001639439.1	KEGG: xau:Xaut_0345 hypothetical protein
YP_001639440.1	KEGG: rpc:RPC_3841 hypothetical protein
YP_001639441.1	PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: bxe:Bxe_B0740 concentrative nucleoside/H+ symporter
YP_001639442.1	KEGG: xau:Xaut_1107 hypothetical protein
YP_001639443.1	PFAM: glycosyl transferase group 1; KEGG: sat:SYN_02667 alpha-D-QuiNAc alpha-1,3-galactosyltransferase
YP_001639444.1	KEGG: nha:Nham_3998 putative DNA topoisomerase I
YP_001639445.1	PFAM: chemotaxis sensory transducer; KEGG: rpb:RPB_0006 methyl-accepting chemotaxis sensory transducer
YP_001639446.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: aci:ACIAD1750 ubiquinol oxidase subunit I, cyanide insensitive
YP_001639447.1	PFAM: regulatory protein LuxR; KEGG: reh:H16_A3710 response regulator, NarL-family
YP_001639448.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: mmr:Mmar10_0119 diguanylate cyclase
YP_001639451.1	PFAM: iron permease FTR1; KEGG: rpc:RPC_2692 iron permease FTR1
YP_001639452.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: xau:Xaut_1233 protein tyrosine phosphatase
YP_001639453.1	PFAM: conserved hypothetical protein; KEGG: rpc:RPC_4416 uncharacterised conserved protein UCP032146
YP_001639454.1	PFAM: histidinol dehydrogenase; KEGG: nha:Nham_0286 histidinol dehydrogenase
YP_001639455.1	KEGG: mes:Meso_0191 hypothetical protein
YP_001639457.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_001639459.1	catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine
YP_001639461.1	KEGG: mbb:BCG_3106 hypothetical protein
YP_001639462.1	KEGG: xau:Xaut_3222 hypothetical protein
YP_001639463.1	PFAM: PhnA protein; KEGG: rle:pRL100320 putative polybetahydroxybutyrate synthesis PhnA protein
YP_001639464.1	PFAM: beta-lactamase domain protein; KEGG: rpc:RPC_0754 beta-lactamase-like
YP_001639465.1	PFAM: regulatory protein LuxR; KEGG: atc:AGR_C_3566 hypothetical protein
YP_001639466.1	KEGG: xau:Xaut_3227 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II
YP_001639469.1	PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: pla:Plav_3355 domain of unknown function DUF1732
YP_001639470.1	Essential for recycling GMP and indirectly, cGMP
YP_001639471.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_4405 ABC transporter related
YP_001639472.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_0060 ErfK/YbiS/YcfS/YnhG
YP_001639473.1	KEGG: rpd:RPD_0641 Cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase
YP_001639474.1	KEGG: xau:Xaut_3850 hypothetical protein
YP_001639475.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_3292 TonB-dependent siderophore receptor
YP_001639476.1	KEGG: eli:ELI_00530 KDPG aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase
YP_001639477.1	catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate
YP_001639478.1	becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers
YP_001639479.1	PFAM: Carbohydrate-selective porin OprB; KEGG: bbt:BBta_7453 OmpA-like transmembrane domain
YP_001639480.1	KEGG: bja:blr1215 hypothetical protein
YP_001639481.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
YP_001639483.1	PFAM: peptidase M48 Ste24p; KEGG: rpd:RPD_3691 peptidase M48, Ste24p
YP_001639484.1	KEGG: rpe:RPE_4304 hypothetical protein
YP_001639485.1	PFAM: protein of unknown function DUF466; KEGG: bcn:Bcen_5299 protein of unknown function DUF466
YP_001639486.1	PFAM: carbon starvation protein CstA; KEGG: bur:Bcep18194_B0097 carbon starvation protein CstA
YP_001639487.1	PFAM: protein of unknown function DUF477; KEGG: bov:BOV_1752 hypothetical protein
YP_001639488.1	PFAM: protein of unknown function DUF477; KEGG: swi:Swit_3453 protein of unknown function DUF477
YP_001639489.1	PFAM: LemA family protein; KEGG: pfo:Pfl_1298 LemA
YP_001639490.1	TIGRFAM: conserved hypothetical selenoprotein; PFAM: Selenoprotein W-related; KEGG: pen:PSEEN3919 hypothetical protein
YP_001639491.1	KEGG: mlo:mll9598 histidine protein kinase; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001639492.1	PFAM: aldo/keto reductase; KEGG: rso:RSc1500 putative oxidoreductase protein
YP_001639493.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bra:BRADO3435 putative transcriptional regulatory protein, Crp/Fnr family
YP_001639494.1	catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose
YP_001639495.1	KEGG: pen:PSEEN5107 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35
YP_001639497.1	KEGG: bja:blr7998 putative ferredoxin-NAD reductase component
YP_001639499.1	KEGG: rpa:RPA0914 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein
YP_001639500.1	PFAM: glycosyl transferase family 4; KEGG: rpa:RPA3982 glycosyl transferase, family 4
YP_001639501.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: bmn:BMA10247_1840 NAD-dependent epimerase/dehydratase family protein
YP_001639502.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: bja:blr5106 acyl-carrier-protein phosphodiesterase
YP_001639503.1	PFAM: helix-turn-helix HxlR type; KEGG: bja:bll5105 transcriptional regulatory protein
YP_001639504.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KR domain protein; KEGG: rpd:RPD_1616 polysaccharide biosynthesis protein CapD
YP_001639505.1	PFAM: protein of unknown function DUF1206; KEGG: rxy:Rxyl_0683 protein of unknown function DUF1206
YP_001639507.1	PFAM: protein of unknown function DUF820; KEGG: hha:Hhal_1924 protein of unknown function DUF820
YP_001639508.1	PFAM: protein of unknown function DUF820; KEGG: ttj:TTHA1553 hypothetical protein
YP_001639509.1	PFAM: homospermidine synthase; KEGG: bra:BRADO6264 homospermidine synthase
YP_001639511.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpd:RPD_0855 GCN5-related N-acetyltransferase
YP_001639512.1	PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bja:blr7759 ornithine decarboxylase
YP_001639513.1	involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan
YP_001639514.1	PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mlr7776 hypothetical protein
YP_001639515.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gox:GOX0502 putative oxidoreductase
YP_001639516.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bra:BRADO4011 putative phosphoglycolate phosphatase; putative haloacid dehalogenase-like hydrolase
YP_001639517.1	PFAM: SmpA/OmlA domain protein; KEGG: rpa:RPA2737 hypothetical protein
YP_001639518.1	KEGG: mes:Meso_1143 ubiquinol-cytochrome c chaperone
YP_001639519.1	KEGG: xau:Xaut_4383 hypothetical protein
YP_001639520.1	TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: xau:Xaut_4384 fatty acid/phospholipid synthesis protein PlsX
YP_001639521.1	KEGG: rpb:RPB_2650 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YP_001639522.1	PFAM: histone family protein DNA-binding protein; KEGG: xau:Xaut_4386 integration host factor, alpha subunit
YP_001639523.1	PFAM: regulatory protein MerR; KEGG: rpc:RPC_2678 transcriptional regulator, MerR family
YP_001639525.1	KEGG: rpb:RPB_2247 hypothetical protein
YP_001639526.1	PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: bra:BRADO5807 conserved hypothetical protein (YeaG); putative Ser protein kinase
YP_001639527.1	PFAM: protein of unknown function DUF444; KEGG: bja:bll6755 hypothetical protein
YP_001639528.1	PFAM: SpoVR family protein; KEGG: bja:bll6754 hypothetical protein
YP_001639529.1	TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: mes:Meso_1967 phosphoribosylglycinamide formyltransferase
YP_001639530.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_001639532.1	PFAM: protein of unknown function UPF0118; KEGG: oan:Oant_2575 protein of unknown function UPF0118
YP_001639533.1	KEGG: pla:Plav_3328 chromosomal replication initiator DnaA
YP_001639534.1	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate
YP_001639535.1	PFAM: Ppx/GppA phosphatase; KEGG: xau:Xaut_3126 Ppx/GppA phosphatase
YP_001639537.1	PFAM: aminotransferase class I and II; KEGG: rle:RL3443 putative aspartate aminotransferase
YP_001639538.1	PFAM: coenzyme A transferase; KEGG: bja:bll0888 hypothetical protein
YP_001639539.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bra:BRADO6566 putative methyl-accepting chemotaxis protein
YP_001639540.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_001639541.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_001639542.1	TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: xau:Xaut_4437 uridylate kinase
YP_001639543.1	catalyzes the hydrolysis of pyrophosphate to phosphate
YP_001639544.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA0410 GCN5-related N-acetyltransferase
YP_001639545.1	KEGG: ccr:CC_0306 hypothetical protein
YP_001639546.1	KEGG: bte:BTH_I2812 hypothetical protein
YP_001639547.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
YP_001639548.1	TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: xau:Xaut_4431 surface antigen (D15)
YP_001639549.1	KEGG: xau:Xaut_4432 putative membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein
YP_001639550.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_001639551.1	PFAM: phosphatidate cytidylyltransferase; KEGG: xau:Xaut_4434 phosphatidate cytidylyltransferase
YP_001639552.1	KEGG: xau:Xaut_4435 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_001639553.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_001639554.1	PFAM: CBS domain containing protein; HPP family protein?; KEGG: rle:pRL120639 putative transmembrane protein
YP_001639555.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: rpb:RPB_0369 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
YP_001639556.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bja:bll2166 transcriptional regulatory protein
YP_001639557.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_B4775 NAD-dependent epimerase/dehydratase:short-chain dehydrogenase/reductase SDR
YP_001639558.1	PFAM: Transketolase domain protein; KEGG: acr:Acry_0717 transketolase domain protein
YP_001639559.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: acr:Acry_0718 transketolase, central region
YP_001639560.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bja:blr2170 probable ABC transporter substrate-binding protein
YP_001639561.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpd:RPD_2721 TRAP C4-dicarboxylate transport system permease DctM subunit
YP_001639562.1	KEGG: xau:Xaut_4179 hypothetical protein
YP_001639563.1	KEGG: mes:Meso_3238 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase
YP_001639564.1	PFAM: nitrogen regulatory protein P-II; KEGG: xau:Xaut_2209 nitrogen regulatory protein P-II
YP_001639565.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: bra:BRADO0305 ammonium transport protein (Amt family)
YP_001639566.1	KEGG: acr:Acry_3492 hypothetical protein
YP_001639567.1	PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: rpa:RPA0279 possible FtsK/SpoIIIE family
YP_001639568.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bbt:BBta_2266 putative outer membrane hemin/siderophore receptor protein
YP_001639569.1	KEGG: xcb:XC_3757 methyltransferase; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001639570.1	KEGG: bov:BOV_A0860 hypothetical protein
YP_001639571.1	TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: oan:Oant_1449 oxidoreductase alpha (molybdopterin) subunit
YP_001639572.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
YP_001639573.1	PFAM: protein of unknown function DUF952; KEGG: xau:Xaut_1468 protein of unknown function DUF952
YP_001639574.1	PFAM: peptidase S24 and S26 domain protein; KEGG: rpe:RPE_0719 putative phage repressor
YP_001639575.1	KEGG: nha:Nham_2576 hypothetical protein
YP_001639576.1	KEGG: nwi:Nwi_2175 hypothetical protein
YP_001639577.1	KEGG: rpa:RPA3429 serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein
YP_001639578.1	consists of N-terminal helix-turn-helix domain and C-terminal shikimate kinase-like domain which may bind benzoyl-CoA; controls inducible expression of the bzd catabolic operon that is involved in the anaerobic catabolism of benzoate
YP_001639579.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rru:Rru_A0438 multi-sensor signal transduction histidine kinase
YP_001639582.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpa:RPA4791 two-component transcriptional regulator, winged helix family
YP_001639583.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bbt:BBta_0711 two-component system regulator
YP_001639584.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: psa:PST_0059 putative lyase
YP_001639585.1	KEGG: rle:pRL120138 putative CobW family cobalimin synthesis protein
YP_001639586.1	PFAM: cyclic nucleotide-binding; KEGG: mlo:mlr2110 hypothetical protein
YP_001639587.1	PFAM: PepSY-associated TM helix domain protein; KEGG: bbt:BBta_6053 putative membrane protein of unknown function with 4 PepSY-associated TM helix domain
YP_001639588.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcc:XCC4162 ferrichrome-iron receptor 3
YP_001639589.1	KEGG: bra:BRADO6323 hypothetical protein
YP_001639590.1	PFAM: oxidoreductase molybdopterin binding; KEGG: sal:Sala_0108 oxidoreductase, molybdopterin binding
YP_001639591.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: afw:Anae109_1054 oxidoreductase FAD/NAD(P)-binding domain protein
YP_001639592.1	PFAM: conserved hypothetical protein; KEGG: mes:Meso_3610 hypothetical protein
YP_001639594.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
YP_001639595.1	KEGG: xau:Xaut_1111 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region
YP_001639596.1	PFAM: protein of unknown function DUF167; KEGG: ret:RHE_CH03912 hypothetical protein
YP_001639597.1	KEGG: bms:BRA0256 hypothetical protein
YP_001639598.1	PFAM: glycosyl transferase family 28; KEGG: pol:Bpro_4922 glycosyl transferase, family 28
YP_001639599.1	PFAM: Creatininase; KEGG: rpb:RPB_0569 creatininase
YP_001639600.1	KEGG: aav:Aave_3523 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001639601.1	KEGG: mpa:MAP1775 hypothetical protein
YP_001639602.1	PFAM: CsbD family protein; KEGG: nha:Nham_1079 CsbD-like
YP_001639603.1	PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_B1702 oxalate / formate antiporter, MFS-type, OFA family
YP_001639604.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rpb:RPB_3432 fumarylacetoacetate (FAA) hydrolase
YP_001639605.1	KEGG: mpt:Mpe_A2226 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein
YP_001639606.1	PFAM: AMP-dependent synthetase and ligase; KEGG: mpt:Mpe_A2230 coenzyme A synthetase-like protein
YP_001639609.1	KEGG: bja:bll6799 hypothetical protein
YP_001639610.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr0485 hypothetical protein
YP_001639611.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB1011 LysR-family transcriptional regulator
YP_001639612.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: gox:GOX0497 hypothetical protein
YP_001639613.1	PFAM: HpcH/HpaI aldolase; KEGG: xau:Xaut_1974 citryl-CoA lyase
YP_001639614.1	KEGG: rpb:RPB_3274 hypothetical protein
YP_001639615.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bra:BRADO3430 putative haloacid dehalogenase-like hydrolase family protein
YP_001639616.1	KEGG: mmw:Mmwyl1_2221 hypothetical protein
YP_001639617.1	KEGG: bja:blr1665 hypothetical protein
YP_001639618.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: acr:Acry_1284 transcriptional regulator, LysR family
YP_001639619.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsh:Rsph17029_3780 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001639620.1	PFAM: phospholipase/Carboxylesterase; KEGG: rsh:Rsph17029_3781 phospholipase/carboxylesterase
YP_001639622.1	KEGG: bja:blr1666 hypothetical protein
YP_001639623.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_001639624.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_001639625.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_001639626.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_001639627.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_001639628.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_001639629.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_001639630.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_001639631.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_001639632.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_001639633.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_001639634.1	KEGG: xau:Xaut_1685 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein
YP_001639635.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_001639636.1	PFAM: ribosomal protein L29; KEGG: sme:SMc01301 50S ribosomal protein L29
YP_001639637.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_001639638.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rba:RB5871 cell division protein FtsH homolog
YP_001639639.1	PFAM: NUDIX hydrolase; KEGG: xau:Xaut_3446 NUDIX hydrolase
YP_001639640.1	PFAM: regulatory protein MarR; transcriptional regulator PadR family protein; KEGG: reu:Reut_B5560 regulatory protein, MarR
YP_001639641.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_001639642.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_001639643.1	PFAM: beta-lactamase domain protein; KEGG: rpc:RPC_1473 beta-lactamase-like
YP_001639644.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_001639645.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_001639646.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
YP_001639647.1	TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: xau:Xaut_4778 preprotein translocase, SecY subunit
YP_001639648.1	late assembly protein
YP_001639649.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
YP_001639650.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_001639651.1	binds 5S rRNA along with protein L5 and L25
YP_001639652.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
YP_001639653.1	PFAM: ribosomal protein S8; KEGG: xau:Xaut_4784 ribosomal protein S8
YP_001639654.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
YP_001639655.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_001639656.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_001639657.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_001639659.1	PFAM: nuclease (SNase domain protein); KEGG: xcb:XC_2149 succinoglycan biosynthesis protein
YP_001639661.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: smd:Smed_5323 diguanylate cyclase
YP_001639662.1	KEGG: bpl:BURPS1106A_1526 hypothetical protein
YP_001639666.1	KEGG: oan:Oant_3682 hypothetical protein
YP_001639668.1	KEGG: rpc:RPC_3285 hypothetical protein
YP_001639669.1	PFAM: monooxygenase FAD-binding; KEGG: bja:blr5591 salicylate hydroxylase
YP_001639670.1	KEGG: xau:Xaut_3232 hypothetical protein
YP_001639671.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rle:RL1320 autolysin AtlE and putative transcriptional regulator AtlR genes, complete cds (hypothetical protein se0751)
YP_001639672.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: pla:Plav_2600 methionine aminopeptidase, type I
YP_001639673.1	PFAM: DNA repair protein RadC; KEGG: nha:Nham_0430 DNA repair protein RadC
YP_001639674.1	PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rpe:RPE_2297 protein of unknown function DUF404
YP_001639675.1	PFAM: protein of unknown function DUF403; KEGG: xau:Xaut_3539 protein of unknown function DUF403
YP_001639677.1	KEGG: sme:SMb21030 hypothetical protein
YP_001639679.1	KEGG: rle:RL1067 hypothetical protein
YP_001639680.1	PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: bbt:BBta_5275 hypothetical protein
YP_001639681.1	KEGG: rpb:RPB_3219 putative proteasome-type protease
YP_001639682.1	PFAM: Silent information regulator protein Sir2; KEGG: ccr:CC_3480 transcriptional regulator, Sir2 family
YP_001639683.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: ret:RHE_CH02715 probable hemolysin protein
YP_001639684.1	PFAM: glycosyl transferase family 2; KEGG: bra:BRADO7033 putative glycosyl transferase, group 2
YP_001639687.1	KEGG: xau:Xaut_4771 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein
YP_001639688.1	KEGG: ang:An01g09380 hypothetical protein Pfam: Extensin_2 Troponin
YP_001639689.1	TIGRFAM: phasin; KEGG: rpc:RPC_3941 phasin 2
YP_001639690.1	PFAM: glycosyl transferase group 1; KEGG: mes:Meso_2590 glycosyl transferase, group 1
YP_001639691.1	PFAM: glycosyl transferase group 1; KEGG: mes:Meso_2590 glycosyl transferase, group 1
YP_001639693.1	KEGG: rpb:RPB_2161 diguanylate cyclase/phosphodiesterase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: PAS domain containing protein
YP_001639694.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: xau:Xaut_0310 acyl-CoA dehydrogenase domain protein
YP_001639695.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: mes:Meso_3027 protein of unknown function DUF6, transmembrane
YP_001639696.1	PFAM: ribonuclease BN; KEGG: xau:Xaut_0308 putative ribonuclease BN
YP_001639697.1	KEGG: pat:Patl_3215 hypothetical protein
YP_001639698.1	KEGG: ccr:CC_1482 sulfate adenylate transferase, subunit 1/adenylylsulfate kinase; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein
YP_001639699.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
YP_001639700.1	KEGG: ret:RHE_CH01132 phosphoadenosine-phosphosulfate reductase protein; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase
YP_001639701.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: rpb:RPB_0007 transcriptional regulator, AsnC family
YP_001639702.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: acr:Acry_2801 flavodoxin/nitric oxide synthase
YP_001639703.1	hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide
YP_001639704.1	KEGG: yen:YE3189 putative hydroxamate-type ferrisiderophore receptor
YP_001639705.1	PFAM: TonB-dependent receptor plug; KEGG: kpn:KPN_02105 TonB-dependent receptor
YP_001639706.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_001639708.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: xau:Xaut_4694 transcriptional regulator, XRE family
YP_001639709.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mmr:Mmar10_1884 single-strand binding protein
YP_001639710.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: mxa:MXAN_3170 oxidoreductase, zinc-binding dehydrogenase family
YP_001639711.1	KEGG: bra:BRADO4341 hypothetical protein; putative secreted protein
YP_001639712.1	KEGG: mmu:13211 DEAH (Asp-Glu-Ala-His) box polypeptide 9
YP_001639713.1	KEGG: mlo:mlr0120 hypothetical protein
YP_001639714.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rme:Rmet_4859 NADH:flavin oxidoreductase/NADH oxidase
YP_001639715.1	PFAM: Glutathione S-transferase domain; KEGG: oan:Oant_1604 putative glutathione S-transferase
YP_001639716.1	KEGG: ret:RHE_CH03579 hypothetical protein
YP_001639717.1	PFAM: Thioredoxin domain; KEGG: oan:Oant_3284 thioredoxin
YP_001639718.1	PFAM: peptidase S16 lon domain protein; KEGG: rpc:RPC_0265 peptidase S16, lon-like
YP_001639719.1	PFAM: protein of unknown function DUF343; KEGG: bra:BRADO0313 hypothetical protein
YP_001639720.1	PFAM: import inner membrane translocase subunit Tim44; KEGG: bra:BRADO5022 conserved hypothetical protein; putative signal peptide
YP_001639721.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aav:Aave_3564 PAS/PAC sensor hybrid histidine kinase
YP_001639722.1	PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: nha:Nham_2572 transglutaminase-like cysteine peptidase, BTLCP
YP_001639723.1	PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: rpa:RPA3421 hypothetical protein
YP_001639724.1	PFAM: type IV pilus assembly PilZ; KEGG: nha:Nham_2571 hypothetical protein
YP_001639725.1	PFAM: protein of unknown function DUF1457; KEGG: smd:Smed_1044 protein of unknown function DUF1457
YP_001639726.1	PFAM: Rhomboid family protein; KEGG: smd:Smed_1045 rhomboid family protein
YP_001639727.1	KEGG: xau:Xaut_4179 hypothetical protein
YP_001639728.1	PFAM: CBS domain containing protein; KEGG: mlo:mlr0188 hypothetical protein
YP_001639729.1	PFAM: Patatin; KEGG: xau:Xaut_1647 patatin
YP_001639730.1	PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: pla:Plav_2663 phosphoribosyl-AMP cyclohydrolase
YP_001639731.1	PFAM: GTP cyclohydrolase I; KEGG: xau:Xaut_1649 GTP cyclohydrolase I
YP_001639732.1	PFAM: nitrogen-fixing NifU domain protein; KEGG: rpc:RPC_3115 nitrogen-fixing NifU-like
YP_001639733.1	PFAM: protein of unknown function DUF37; KEGG: rpa:RPA3394 hypothetical protein
YP_001639734.1	PFAM: protein of unknown function UPF0005; KEGG: oan:Oant_0100 protein of unknown function UPF0005
YP_001639735.1	PFAM: protein of unknown function DUF214; KEGG: nwi:Nwi_0414 protein of unknown function DUF214
YP_001639736.1	PFAM: ATP-binding region ATPase domain protein; KEGG: rpa:RPA4524 sensor histidine kinase
YP_001639737.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
YP_001639738.1	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids
YP_001639739.1	KEGG: rpd:RPD_2650 peptidase S26A, signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein
YP_001639740.1	PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: rpa:RPA2697 putative ribonuclease III
YP_001639741.1	TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: rpe:RPE_3021 GTP-binding protein Era
YP_001639742.1	PFAM: methyltransferase small; KEGG: ccr:CC_1837 hypothetical protein
YP_001639743.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: ccr:CC_1838 ribosomal small subunit pseudouridine synthase A
YP_001639744.1	KEGG: jan:Jann_0526 hypothetical protein
YP_001639745.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: mgm:Mmc1_2003 Sel1 domain protein repeat-containing protein
YP_001639746.1	KEGG: ret:RHE_CH00820 hypothetical protein
YP_001639748.1	PFAM: K potassium transporter; KEGG: bja:blr4695 potassium uptake protein
YP_001639749.1	KEGG: rpa:RPA4031 hypothetical protein
YP_001639750.1	PFAM: NUDIX hydrolase; KEGG: xau:Xaut_2145 NUDIX hydrolase
YP_001639751.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpa:RPA4638 methyl-accepting chemotaxis receptor/sensory transducer
YP_001639752.1	PFAM: protein of unknown function DUF610 YibQ; KEGG: nwi:Nwi_0450 hypothetical protein
YP_001639753.1	KEGG: rpb:RPB_0258 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_001639754.1	PFAM: peptidase M23B; KEGG: rpa:RPA0168 putative filament-A precursor
YP_001639755.1	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
YP_001639756.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rme:Rmet_5758 major facilitator superfamily MFS_1
YP_001639757.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bxe:Bxe_B1411 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
YP_001639758.1	PFAM: DSBA oxidoreductase; KEGG: pla:Plav_1378 DsbA oxidoreductase
YP_001639759.1	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming
YP_001639760.1	KEGG: mlo:mll1459 hypothetical protein
YP_001639761.1	KEGG: bur:Bcep18194_A6516 hypothetical protein
YP_001639762.1	TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: nwi:Nwi_1220 phosphoglycolate phosphatase
YP_001639763.1	KEGG: xau:Xaut_3220 hypothetical protein
YP_001639764.1	KEGG: bms:BR1010 ribose 5-phosphate isomerase A; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase
YP_001639765.1	KEGG: xau:Xaut_3222 hypothetical protein
YP_001639766.1	PFAM: O-antigen polymerase; KEGG: rru:Rru_A2114 O-antigen polymerase
YP_001639767.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: xau:Xaut_3224 glutathione-disulfide reductase
YP_001639768.1	KEGG: rpe:RPE_2709 TRAP transporter solute receptor, TAXI family
YP_001639769.1	KEGG: rru:Rru_A0639 regulatory protein RecX
YP_001639770.1	PFAM: OsmC family protein; KEGG: bja:bll6262 probable osmotically inducible protein
YP_001639771.1	PFAM: Radical SAM domain protein; KEGG: eli:ELI_05380 hypothetical protein
YP_001639772.1	PFAM: Uracil-DNA glycosylase superfamily; KEGG: rpe:RPE_1823 phage SPO1 DNA polymerase-related protein
YP_001639773.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B2482 putative zinc-containing dehydrogenase
YP_001639774.1	KEGG: psa:PST_0139 probable transcriptional regulator
YP_001639775.1	KEGG: rpa:RPA3382 hypothetical protein
YP_001639776.1	KEGG: rpb:RPB_2186 hypothetical protein
YP_001639777.1	PFAM: HpcH/HpaI aldolase; KEGG: mlo:mlr0906 citrate lyase beta chain
YP_001639778.1	PFAM: Glutathione S-transferase domain; KEGG: rpa:RPA4314 possible glutathione S-transferase
YP_001639780.1	PFAM: Catalase domain protein; KEGG: bbt:BBta_6719 catalase, protein SrpA precursor
YP_001639782.1	KEGG: xau:Xaut_1646 hypothetical protein
YP_001639783.1	PFAM: nitroreductase; KEGG: rpd:RPD_3262 nitroreductase
YP_001639784.1	KEGG: xau:Xaut_1636 hypothetical protein
YP_001639786.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bch:Bcen2424_4885 transcriptional regulator, GntR family
YP_001639787.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
YP_001639789.1	PFAM: ROK family protein; KEGG: sfu:Sfum_0489 ROK family protein
YP_001639790.1	PFAM: sodium:dicarboxylate symporter; KEGG: bja:blr7187 C4-dicarboxylate transport protein
YP_001639791.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme
YP_001639792.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_001639793.1	KEGG: xau:Xaut_2205 hypothetical protein
YP_001639794.1	PFAM: peptidase M16 domain protein; KEGG: xau:Xaut_2204 peptidase M16 domain protein
YP_001639795.1	PFAM: peptidase M16 domain protein; KEGG: xau:Xaut_2203 peptidase M16 domain protein
YP_001639796.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: smd:Smed_2404 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001639797.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bja:blr3831 ferredoxin NADP+ reductase
YP_001639798.1	TIGRFAM: dethiobiotin synthase; KEGG: pla:Plav_0040 dethiobiotin synthase
YP_001639799.1	KEGG: rpc:RPC_3528 PRC-barrel
YP_001639800.1	PFAM: response regulator receiver; KEGG: bam:Bamb_4524 PAS/PAC sensor hybrid histidine kinase
YP_001639801.1	PFAM: protein of unknown function DUF1275; KEGG: bov:BOV_1767 hypothetical protein
YP_001639802.1	SMART: WD-40 repeat protein; KEGG: rpb:RPB_4555 WD-40 repeat protein
YP_001639803.1	KEGG: xau:Xaut_4558 hypothetical protein
YP_001639804.1	KEGG: ret:RHE_CH03836 hypothetical protein
YP_001639805.1	KEGG: rru:Rru_A2114 O-antigen polymerase
YP_001639806.1	PFAM: protein of unknown function DUF1025; KEGG: bja:blr0494 hypothetical protein
YP_001639807.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bra:BRADO0776 putative HAD-superfamily hydrolase; putative pyrimidine 5-nucleotidase
YP_001639808.1	TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: rpa:RPA0629 acetylglutamate kinase
YP_001639810.1	PFAM: MOSC domain containing protein; KEGG: rpd:RPD_4096 hypothetical protein
YP_001639811.1	PFAM: MOSC domain containing protein; KEGG: pla:Plav_1750 MOSC domain containing protein
YP_001639812.1	KEGG: rpd:RPD_4095 ATPase AAA-2; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_001639813.1	PFAM: metallophosphoesterase; KEGG: sfu:Sfum_1247 metallophosphoesterase
YP_001639814.1	PFAM: short chain fatty acid transporter; KEGG: vei:Veis_4199 short chain fatty acid transporter
YP_001639815.1	PFAM: protein of unknown function DUF423; KEGG: rpd:RPD_0071 protein of unknown function DUF423
YP_001639816.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_001639817.1	PFAM: 60 kDa inner membrane insertion protein; KEGG: rpd:RPD_0069 60 kDa inner membrane insertion protein
YP_001639818.1	TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: xau:Xaut_1922 ribonuclease P protein component
YP_001639819.1	in Escherichia coli transcription of this gene is enhanced by polyamines
YP_001639820.1	PFAM: protein of unknown function DUF1465; KEGG: nwi:Nwi_2748 protein of unknown function DUF1465
YP_001639821.1	TIGRFAM: ribosomal protein L31; KEGG: xau:Xaut_0843 ribosomal protein L31
YP_001639822.1	KEGG: bbt:BBta_6942 putative ABC transporter, ATP-binding protein, ATPase; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_001639823.1	catalyzes the formation of pyruvate from D-cysteine
YP_001639826.1	PFAM: OmpA/MotB domain protein; KEGG: nha:Nham_3542 OmpA/MotB
YP_001639827.1	KEGG: bja:bll1511 hypothetical protein
YP_001639828.1	PFAM: metallophosphoesterase; KEGG: bra:BRADO1139 metallo-phosphoesterase
YP_001639829.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: smd:Smed_2646 5-formyltetrahydrofolate cyclo-ligase
YP_001639830.1	PFAM: protein of unknown function DUF710; KEGG: xau:Xaut_3073 protein of unknown function DUF710
YP_001639831.1	KEGG: mlo:msl3747 contains similarity to tropomyosin
YP_001639832.1	KEGG: smd:Smed_2651 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_001639834.1	PFAM: phosphoglycerate kinase; KEGG: rpd:RPD_4314 phosphoglycerate kinase
YP_001639835.1	class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis
YP_001639836.1	PFAM: thiamine monophosphate synthase; KEGG: nha:Nham_3535 thiamine monophosphate synthase
YP_001639837.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: rpa:RPA0938 hypothetical protein
YP_001639838.1	PFAM: amino acid permease-associated region; KEGG: sal:Sala_1704 amino acid permease-associated region
YP_001639839.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: pla:Plav_3236 carbohydrate kinase, YjeF related protein
YP_001639840.1	PFAM: nitrogen regulatory protein P-II; KEGG: rpe:RPE_2506 nitrogen regulatory protein P-II
YP_001639841.1	catalyzes the formation of glutamate from glutamine
YP_001639842.1	PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: bja:blr4169 glutamine synthetase II
YP_001639843.1	TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: bja:blr4949 glutamine synthetase I
YP_001639844.1	PFAM: NADPH-dependent FMN reductase; KEGG: rpb:RPB_2517 NADPH-dependent FMN reductase
YP_001639846.1	KEGG: xau:Xaut_3864 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein
YP_001639847.1	PFAM: protein of unknown function DUF983; KEGG: rpa:RPA3126 hypothetical protein
YP_001639848.1	PFAM: NUDIX hydrolase; KEGG: xau:Xaut_3862 NUDIX hydrolase
YP_001639849.1	KEGG: rpb:RPB_0608 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; type IV pilus assembly PilZ; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001639850.1	KEGG: rpa:RPA3202 hypothetical protein
YP_001639851.1	PFAM: domain of unknown function DUF1730; KEGG: mlo:mlr4636 iron-sulfur cluster binding protein
YP_001639852.1	PFAM: Glutathione S-transferase domain; KEGG: xau:Xaut_1808 glutathione S-transferase domain
YP_001639853.1	KEGG: atc:AGR_C_505 undecaprenyl-diphosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA
YP_001639854.1	PFAM: methylmalonyl-CoA mutase; KEGG: bra:BRADO2682 methylmalonyl-CoA mutase small subunit (MCM-beta)
YP_001639855.1	KEGG: rpb:RPB_0042 hypothetical protein
YP_001639857.1	KEGG: xau:Xaut_4374 hypothetical protein
YP_001639858.1	KEGG: rru:Rru_B0038 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_001639859.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ret:RHE_CH01514 dTDP-glucose-4,6-dehydratase protein
YP_001639860.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ccr:CC_1140 dTDP-4-dehydrorhamnose reductase
YP_001639861.1	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mmw:Mmwyl1_0838 glucose-1-phosphate thymidylyltransferase
YP_001639862.1	KEGG: swi:Swit_2155 hypothetical protein
YP_001639863.1	PFAM: secretion protein HlyD family protein; KEGG: sil:SPO2718 hypothetical protein
YP_001639864.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins
YP_001639865.1	KEGG: sil:SPO2714 peptidase, M50 family
YP_001639866.1	PFAM: GAF domain protein; KEGG: sil:SPO2715 GAF domain protein
YP_001639867.1	KEGG: mgm:Mmc1_2178 hypothetical protein
YP_001639868.1	PFAM: O-methyltransferase family 2; Methyltransferase type 11; Methyltransferase type 12; KEGG: stp:Strop_0204 O-methyltransferase, family 2
YP_001639869.1	KEGG: lpp:lpp0585 hypothetical protein
YP_001639870.1	PFAM: FAD dependent oxidoreductase; tryptophan halogenase; KEGG: ccr:CC_0972 tryptophan halogenase, putative
YP_001639872.1	PFAM: Radical SAM domain protein; KEGG: mbu:Mbur_1233 Fe-S protein, radical SAM family
YP_001639873.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rpb:RPB_3438 transcriptional regulator, AraC family
YP_001639874.1	PFAM: SapC family protein; KEGG: pin:Ping_3347 SapC family protein
YP_001639875.1	KEGG: cch:Cag_0616 parallel beta-helix repeat
YP_001639877.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: noc:Noc_0994 methylase involved in ubiquinone/menaquinone biosynthesis-like
YP_001639878.1	PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pca:Pcar_2487 Fe-S oxidoreductase
YP_001639879.1	PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gme:Gmet_0101 radical SAM
YP_001639880.1	PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: sil:SPO1361 multicopper oxidase domain protein
YP_001639881.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
YP_001639882.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
YP_001639883.1	binds and unfolds substrates as part of the ClpXP protease
YP_001639884.1	KEGG: xau:Xaut_3593 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001639888.1	KEGG: gox:GOX0496 hypothetical protein
YP_001639889.1	KEGG: gbe:GbCGDNIH1_0228 glycosyltransferase
YP_001639892.1	PFAM: Hemolysin-type calcium-binding region; KEGG: ana:alr7304 similar to hlyA
YP_001639893.1	PFAM: terminase large subunit; KEGG: nmu:Nmul_A1463 phage terminase, large subunit, PBSX
YP_001639894.1	KEGG: bvi:Bcep1808_4528 hypothetical protein
YP_001639898.1	PFAM: Resolvase domain; Recombinase; KEGG: fra:Francci3_1684 resolvase-like
YP_001639902.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: cbd:COXBU7E912_1655 cytidine/deoxycytidylate deaminase family protein
YP_001639904.1	PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator
YP_001639907.1	KEGG: atc:AGR_C_790 hypothetical protein
YP_001639909.1	KEGG: rle:RL4065 hypothetical protein
YP_001639911.1	KEGG: xau:Xaut_4477 hypothetical protein
YP_001639915.1	KEGG: ret:RHE_CH00634 hypothetical protein
YP_001639917.1	PFAM: Resolvase domain; KEGG: bbt:BBta_6747 putative resolvase (site-specific recombinase)
YP_001639918.1	PFAM: helix-turn-helix HxlR type; KEGG: eca:ECA2934 putative transcriptional regulator
YP_001639919.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: smd:Smed_5815 NADP oxidoreductase coenzyme F420-dependent
YP_001639920.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pfo:Pfl_2299 zinc-containing alcohol dehydrogenase superfamily
YP_001639921.1	KEGG: dps:DP0911 hypothetical protein
YP_001639923.1	KEGG: nha:Nham_2527 hypothetical protein
YP_001639926.1	PFAM: integrase family protein; KEGG: rpc:RPC_3867 phage integrase
YP_001639927.1	PFAM: glycosyl transferase group 1; KEGG: swi:Swit_4003 glycosyl transferase, group 1
YP_001639928.1	KEGG: pla:Plav_2197 hypothetical protein
YP_001639929.1	PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: psa:PST_0141 modification methylase, HemK family
YP_001639930.1	PFAM: Protein of unknown function YqcI/YcgG; KEGG: rpb:RPB_1618 hypothetical protein
YP_001639931.1	KEGG: pla:Plav_3249 hypothetical protein
YP_001639932.1	TIGRFAM: oligopeptide transporters, OPT superfamily; oligopeptide transporter, OPT family; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: reh:H16_A3260 oligopeptide transporter
YP_001639933.1	PFAM: ABC-2 type transporter; KEGG: xau:Xaut_3810 ABC-2 type transporter
YP_001639935.1	PFAM: ribonuclease BN; KEGG: bra:BRADO2085 conserved hypothetical protein; putative membrane protein; putative ribonuclease
YP_001639936.1	KEGG: osa:4337187 Os04g0644400
YP_001639937.1	KEGG: xau:Xaut_2377 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2
YP_001639938.1	PFAM: Endonuclease V; KEGG: mca:MCA0045 endonuclease V
YP_001639939.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_001639940.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_001639941.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
YP_001639942.1	KEGG: rpd:RPD_3516 hypothetical protein
YP_001639943.1	PFAM: Flp/Fap pilin component; KEGG: smd:Smed_5123 Flp/Fap pilin component
YP_001639944.1	PFAM: peptidase A24A prepilin type IV; KEGG: bbt:BBta_7029 putative type IV prepilin peptidase, CpaA
YP_001639945.1	TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: rpc:RPC_3712 Flp pilus assembly CpaB
YP_001639946.1	PFAM: type II and III secretion system protein; transport-associated; KEGG: bbt:BBta_7031 putative pilus assembly protein CpaC
YP_001639947.1	TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; PFAM: Pilus biogenesis CpaD family protein; KEGG: nha:Nham_0390 pilus assembly protein CpaD
YP_001639948.1	KEGG: rpc:RPC_3715 putative pilus assembly protein CpaE
YP_001639949.1	PFAM: type II secretion system protein E; KEGG: bja:bll1436 pilus assembly protein
YP_001639950.1	PFAM: type II secretion system protein; KEGG: bbt:BBta_7035 putative pilus assembly protein
YP_001639951.1	PFAM: type II secretion system protein; KEGG: rpa:RPA3683 hypothetical protein
YP_001639952.1	PFAM: MaoC domain protein dehydratase; KEGG: nwi:Nwi_2507 MaoC-like dehydratase
YP_001639953.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: gbe:GbCGDNIH1_2292 transporter, MFS superfamily
YP_001639954.1	PFAM: OsmC family protein; KEGG: gbe:GbCGDNIH1_0067 organic hydroperoxide resistance protein
YP_001639955.1	PFAM: CoA-binding domain protein; KEGG: rpb:RPB_2668 CoA-binding
YP_001639956.1	PFAM: thioesterase superfamily protein; KEGG: pla:Plav_2936 thioesterase superfamily protein
YP_001639957.1	PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_1628 major facilitator superfamily MFS_1
YP_001639958.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_A4297 putative diguanylate cyclase (GGDEF domain)
YP_001639959.1	PFAM: BA14K family protein; KEGG: rpb:RPB_1022 BA14K-like
YP_001639960.1	KEGG: smd:Smed_5683 conserved hypothetical membrane spanning protein
YP_001639961.1	PFAM: CsbD family protein; KEGG: bra:BRADO1086 conserved hypothetical protein, hypothetical UPF0337 protein
YP_001639962.1	KEGG: rpa:RPA0207 hypothetical protein
YP_001639963.1	PFAM: 3'-5' exonuclease; KEGG: rpc:RPC_0419 3'-5' exonuclease
YP_001639964.1	PFAM: protein of unknown function DUF1239; KEGG: nwi:Nwi_0172 hypothetical protein
YP_001639965.1	PFAM: OstA family protein; KEGG: rpa:RPA0048 hypothetical protein
YP_001639966.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nwi:Nwi_0174 ABC transporter, ATPase subunit
YP_001639967.1	TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: bra:BRADO0113 RNA polymerase sigma-54 factor
YP_001639968.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: rpc:RPC_0414 sigma 54 modulation protein/ribosomal protein S30EA
YP_001639969.1	TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: xau:Xaut_2034 PTS IIA-like nitrogen-regulatory protein PtsN
YP_001639971.1	KEGG: rpc:RPC_1250 magnesium chelatase ATPase subunit I; TIGRFAM: magnesium chelatase ATPase subunit I; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase
YP_001639972.1	catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate
YP_001639973.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
YP_001639974.1	PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: gbe:GbCGDNIH1_0264 MarC family integral membrane protein
YP_001639975.1	PFAM: Methyltransferase type 11; KEGG: xau:Xaut_2018 methyltransferase type 11
YP_001639976.1	KEGG: smd:Smed_2552 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein
YP_001639977.1	KEGG: bja:bsr0189 hypothetical protein
YP_001639978.1	TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bja:blr0190 probable site-specific integrase/recombinase
YP_001639979.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: psa:PST_2767 GGDEF domain protein
YP_001639980.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: sus:Acid_6936 glycoside hydrolase, family 3 domain protein
YP_001639981.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_2635 binding-protein-dependent transport systems inner membrane component
YP_001639982.1	KEGG: sal:Sala_1501 hypothetical protein
YP_001639983.1	PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: xau:Xaut_4557 aminotransferase class I and II
YP_001639984.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bvi:Bcep1808_1113 efflux transporter, RND family, MFP subunit
YP_001639985.1	PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_A2908 RND multidrug efflux pump, AcrB/AcrD/AcrF family
YP_001639986.1	PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_A2909 RND multidrug efflux pump, AcrB/AcrD/AcrF family
YP_001639987.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A4489 RND efflux system, outer membrane lipoprotein, NodT family
YP_001639988.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_001639989.1	KEGG: bbt:BBta_0340 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase
YP_001639992.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rpe:RPE_1253 thiamine pyrophosphate enzyme TPP binding domain protein
YP_001639993.1	PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: mxa:MXAN_4998 hypothetical protein
YP_001639994.1	PFAM: Polyprenyl synthetase; KEGG: xau:Xaut_0205 polyprenyl synthetase
YP_001639995.1	TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: sme:SMc03883 putative monofunctional biosynthetic peptidoglycan transglycosylase transmembrane protein
YP_001639996.1	PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: rxy:Rxyl_0663 deoxyribodipyrimidine photolyase
YP_001639997.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bra:BRADO4734 putative periplasmic mannitol-binding protein; putative Trap-T transport system, DctP subunit
YP_001639998.1	KEGG: smd:Smed_5268 protein tyrosine phosphatase
YP_001639999.1	PFAM: Extracellular ligand-binding receptor; KEGG: rru:Rru_A1746 extracellular ligand-binding receptor
YP_001640000.1	PFAM: polysaccharide export protein; KEGG: xau:Xaut_3820 polysaccharide export protein
YP_001640001.1	PFAM: sulfatase; KEGG: bte:BTH_I1340 putative capsular polysaccharide biosynthesis protein WcbQ
YP_001640002.1	PFAM: Capsule polysaccharide biosynthesis protein; KEGG: swi:Swit_2453 capsule polysaccharide biosynthesis protein
YP_001640003.1	PFAM: Capsule polysaccharide biosynthesis protein; KEGG: bbr:BB2922 capsular polysaccharide export protein
YP_001640004.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mag:amb0744 dehydrogenase with different specificities
YP_001640005.1	PFAM: formyl transferase domain protein; KEGG: cch:Cag_0487 methionyl-tRNA formyltransferase
YP_001640006.1	catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
YP_001640007.1	TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: bja:blr2485 rieske iron-sulfur protein
YP_001640008.1	PFAM: Cytochrome b/b6 domain; KEGG: xau:Xaut_2958 cytochrome b/b6 domain
YP_001640009.1	PFAM: cytochrome c1; KEGG: rpd:RPD_1303 cytochrome c1
YP_001640010.1	Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate
YP_001640011.1	KEGG: rpb:RPB_0710 hypothetical protein
YP_001640012.1	PFAM: metallophosphoesterase; KEGG: mes:Meso_1478 twin-arginine translocation pathway signal
YP_001640013.1	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis
YP_001640014.1	KEGG: rpc:RPC_0305 hypothetical protein
YP_001640015.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_001640016.1	TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: rpe:RPE_0367 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
YP_001640017.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_001640018.1	TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: rle:RL0041 putative histidine biosynthesis bifunctional protein
YP_001640019.1	catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis
YP_001640020.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bra:BRADO6566 putative methyl-accepting chemotaxis protein
YP_001640021.1	KEGG: mmr:Mmar10_1844 hypothetical protein
YP_001640022.1	PFAM: response regulator receiver; KEGG: bja:bll7342 two-component response regulator
YP_001640023.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bra:BRADO1451 hypothetical protein
YP_001640025.1	TIGRFAM: phasin; PFAM: Phasin 2 family protein; KEGG: nha:Nham_1250 phasin 2
YP_001640026.1	KEGG: rpc:RPC_3942 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001640027.1	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
YP_001640028.1	PFAM: protein of unknown function DUF485; KEGG: rme:Rmet_5782 protein of unknown function DUF485
YP_001640029.1	TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: mag:amb2727 predicted symporter
YP_001640030.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: xau:Xaut_3353 major facilitator superfamily MFS_1
YP_001640031.1	KEGG: bra:BRADO0338 purine biosynthesis protein; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region
YP_001640032.1	PFAM: Heparinase II/III family protein; KEGG: xau:Xaut_0039 heparinase II/III family protein
YP_001640033.1	PFAM: Rhodanese domain protein; KEGG: sit:TM1040_2634 3-mercaptopyruvate sulfurtransferase
YP_001640035.1	PFAM: Hemolysin-type calcium-binding region; KEGG: dde:Dde_1416 hypothetical protein
YP_001640036.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: nar:Saro_0237 DEAD/DEAH box helicase-like
YP_001640037.1	PFAM: protein of unknown function DUF1508; KEGG: bmb:BruAb1_0978 hypothetical protein
YP_001640038.1	KEGG: rpb:RPB_1415 hypothetical protein
YP_001640039.1	PFAM: thioesterase superfamily protein; KEGG: sil:SPO0440 thioesterase family protein
YP_001640040.1	PFAM: beta-lactamase domain protein; KEGG: bbt:BBta_7673 putative enzyme with metallo-hydrolase/oxidoreductase domain
YP_001640041.1	KEGG: ret:RHE_CH00012 DNA gyrase subunit B protein; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II
YP_001640042.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mes:Meso_3107 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001640043.1	TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: bbt:BBta_4693 mechanosensitive channel
YP_001640045.1	PFAM: protein of unknown function DUF1236; KEGG: rpb:RPB_0713 protein of unknown function DUF1236
YP_001640046.1	PFAM: aminotransferase class I and II; KEGG: mlo:mlr2987 aspartate aminotransferase
YP_001640048.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpd:RPD_3883 ATP-binding region, ATPase-like
YP_001640049.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xau:Xaut_2558 two component transcriptional regulator, winged helix family
YP_001640050.1	PFAM: regulatory protein MarR; KEGG: xau:Xaut_2557 transcriptional regulator, MarR family
YP_001640051.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_001640052.1	KEGG: rpc:RPC_0235 hypothetical protein
YP_001640053.1	KEGG: mlo:mll6900 hypothetical protein
YP_001640054.1	PFAM: multi antimicrobial extrusion protein MatE; KEGG: gox:GOX1028 hypothetical protein
YP_001640055.1	TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: xau:Xaut_4650 potassium efflux system protein
YP_001640056.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_001640057.1	KEGG: xau:Xaut_2356 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: aminoglycoside phosphotransferase
YP_001640058.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: xau:Xaut_2596 redoxin domain protein
YP_001640059.1	PFAM: protein of unknown function DUF179; KEGG: xau:Xaut_2594 protein of unknown function DUF179
YP_001640060.1	KEGG: bbt:BBta_4904 hypothetical protein
YP_001640061.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001640062.1	PFAM: Helix-turn-helix type 11 domain protein; KEGG: atc:AGR_pAT_393 hypothetical protein
YP_001640063.1	KEGG: atc:AGR_pAT_394 glutathione S-transferase
YP_001640064.1	KEGG: bov:BOV_1165 protein RecA; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase
YP_001640065.1	KEGG: bja:bll5808 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_001640066.1	TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: bja:bll5809 flagellar biosynthetic protein
YP_001640067.1	TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: rpe:RPE_1555 flagellar biosynthetic protein FliR
YP_001640068.1	TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: bja:bsl5811 flagellar biosynthetic protein
YP_001640069.1	TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: rpa:RPA3886 flagellar hook-basal body complex protein FliE
YP_001640070.1	with FlgF and B makes up the proximal portion of the flagellar basal body rod
YP_001640071.1	with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum
YP_001640072.1	KEGG: rpa:RPA3889 hypothetical protein
YP_001640073.1	PFAM: FAD dependent oxidoreductase; KEGG: bpd:BURPS668_0239 FAD-dependent oxidoreductase
YP_001640074.1	PFAM: transglutaminase domain protein; KEGG: gbe:GbCGDNIH1_1338 transglutaminase-like enzymes, putative cysteine proteases
YP_001640075.1	TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: bja:blr0469 heme exporter protein C
YP_001640076.1	TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD)
YP_001640077.1	TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: rpc:RPC_0209 periplasmic protein thiol
YP_001640078.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gox:GOX1356 oxidoreductase, iron-sulphur binding subunit
YP_001640079.1	PFAM: protein of unknown function DUF162; KEGG: gox:GOX1357 putative electron transport protein
YP_001640080.1	PFAM: protein of unknown function DUF162; KEGG: gox:GOX1358 hypothetical protein
YP_001640081.1	PFAM: transglutaminase domain protein; KEGG: xau:Xaut_1588 transglutaminase domain protein
YP_001640082.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_001640083.1	forms a direct contact with the tRNA during translation
YP_001640084.1	KEGG: bov:BOV_1408 hypothetical protein
YP_001640085.1	PFAM: TOBE domain protein; KEGG: oan:Oant_3365 TOBE domain protein
YP_001640086.1	PFAM: Aldose 1-epimerase; KEGG: bra:BRADO2126 hypothetical protein
YP_001640087.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hha:Hhal_0759 ABC transporter related
YP_001640089.1	KEGG: mpt:Mpe_A3498 hypothetical protein
YP_001640090.1	PFAM: protein of unknown function DUF329; KEGG: bra:BRADO6633 hypothetical protein
YP_001640091.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: rpd:RPD_4276 maf protein
YP_001640094.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpd:RPD_0700 TonB-dependent siderophore receptor
YP_001640097.1	TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: bbt:BBta_0380 heme ABC transporter (heme exporter protein B), permease protein (cytochrome c biogenesis)
YP_001640098.1	KEGG: bja:blr0467 heme exporter protein A; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001640100.1	TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: xau:Xaut_3852 aconitate hydratase 1
YP_001640101.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rpc:RPC_2699 antibiotic biosynthesis monooxygenase
YP_001640102.1	TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: bbt:BBta_6524 putative maleylacetoacetate isomerase (MAAI)
YP_001640103.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gbe:GbCGDNIH1_1652 NADH dehydrogenase
YP_001640104.1	PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: rpc:RPC_0686 ethyl tert-butyl ether degradation EthD
YP_001640106.1	PFAM: chemotaxis sensory transducer; KEGG: rpb:RPB_3522 methyl-accepting chemotaxis sensory transducer
YP_001640107.1	KEGG: oan:Oant_0429 quinolinate synthetase complex, A subunit; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A
YP_001640108.1	KEGG: gbe:GbCGDNIH1_0641 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001640109.1	KEGG: mes:Meso_2555 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase
YP_001640110.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:blr7232 hypothetical protein
YP_001640111.1	KEGG: ccr:CC_1532 hypothetical protein
YP_001640112.1	PFAM: protein of unknown function DUF971; KEGG: oan:Oant_2230 protein of unknown function DUF971
YP_001640113.1	KEGG: oan:Oant_2231 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001640114.1	KEGG: bte:BTH_I2812 hypothetical protein
YP_001640115.1	PFAM: GSCFA domain protein; KEGG: swi:Swit_3997 GSCFA
YP_001640116.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rpa:RPA1973 3-hydroxyisobutyrate dehydrogenase
YP_001640117.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
YP_001640118.1	KEGG: xau:Xaut_1660 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase
YP_001640119.1	KEGG: bja:bll6506 serine protease DO-like precursor; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein
YP_001640120.1	TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: xau:Xaut_1663 HflC protein
YP_001640121.1	TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: xau:Xaut_1664 HflK protein
YP_001640122.1	PFAM: dihydrofolate reductase region; KEGG: eba:ebA4414 dihydrofolate reductase
YP_001640123.1	PFAM: thymidylate synthase; KEGG: xau:Xaut_3514 thymidylate synthase
YP_001640124.1	PFAM: Abortive infection protein; KEGG: syr:SynRCC307_0866 predicted metal-dependent membrane protease
YP_001640125.1	PFAM: protein of unknown function DUF1321; KEGG: xau:Xaut_1418 protein of unknown function DUF1321
YP_001640126.1	PFAM: cytochrome P450; KEGG: mes:Meso_4009 cytochrome P450
YP_001640127.1	TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; KEGG: xau:Xaut_1667 fumarate hydratase, class II
YP_001640129.1	PFAM: protein of unknown function DUF1052; KEGG: xau:Xaut_0307 protein of unknown function DUF1052
YP_001640130.1	PFAM: periplasmic binding protein; KEGG: bja:bll4160 probable substrate-binding protein
YP_001640131.1	KEGG: ypa:YPA_0241 hypothetical protein
YP_001640132.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal
YP_001640133.1	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: xau:Xaut_1326 phenazine biosynthesis protein PhzF family
YP_001640134.1	PFAM: NUDIX hydrolase; KEGG: rpe:RPE_2205 hypothetical protein
YP_001640136.1	catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis
YP_001640137.1	KEGG: mes:Meso_2666 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase
YP_001640138.1	PFAM: protein of unknown function DUF1611; KEGG: sme:SMc03251 hypothetical protein
YP_001640139.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: nha:Nham_1314 mandelate racemase/muconate lactonizing enzyme
YP_001640140.1	PFAM: Lytic transglycosylase catalytic; KEGG: mag:amb3136 hypothetical protein
YP_001640141.1	PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: mxa:MXAN_0452 putative myo-inositol-1-phosphate synthase
YP_001640142.1	KEGG: kra:Krad_3431 hypothetical protein
YP_001640143.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bch:Bcen2424_3334 methyltransferase type 11
YP_001640144.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: kra:Krad_3430 oxidoreductase domain protein
YP_001640145.1	PFAM: protein of unknown function DUF181; KEGG: kra:Krad_3428 protein of unknown function DUF181
YP_001640146.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sco:SCO6575 hypothetical protein
YP_001640147.1	PFAM: glycosyl transferase group 1; KEGG: kra:Krad_3427 glycosyl transferase group 1
YP_001640148.1	PFAM: LmbE family protein; KEGG: kra:Krad_3426 LmbE family protein
YP_001640149.1	PFAM: Uracil-DNA glycosylase superfamily; KEGG: cph:Cpha266_1617 hypothetical protein
YP_001640150.1	KEGG: xau:Xaut_0184 putative membrane protein of unknown function
YP_001640151.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rpd:RPD_0887 ATP-binding region, ATPase-like
YP_001640152.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: spe:Spro_2413 heavy metal translocating P-type ATPase
YP_001640153.1	TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: mes:Meso_3892 transcriptional regulator, MerR family
YP_001640154.1	KEGG: nha:Nham_2671 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001640155.1	KEGG: rpb:RPB_4286 methyl-accepting chemotaxis sensory transducer
YP_001640156.1	PFAM: acyltransferase 3; KEGG: atc:AGR_C_4279 hypothetical protein
YP_001640157.1	TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: rpa:RPA0434 putative tRNA pseudouridine 55 synthase
YP_001640158.1	PFAM: ribosome-binding factor A; KEGG: rpa:RPA0435 putative ribosome-binding factor A
YP_001640159.1	TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; GTP-binding protein HSR1-related; elongation factor Tu domain 2 protein; translation initiation factor IF-2 domain protein; Initiation factor 2 associated domain protein ; Miro domain protein; KEGG: bbt:BBta_0057 translation initiation factor IF-2
YP_001640160.1	PFAM: protein of unknown function DUF448; KEGG: xau:Xaut_0294 protein of unknown function DUF448
YP_001640161.1	KEGG: xau:Xaut_0295 NusA antitermination factor; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH type 1 domain protein; NusA domain protein; SMART: KH domain protein
YP_001640162.1	PFAM: protein of unknown function DUF150; KEGG: xau:Xaut_0296 protein of unknown function DUF150
YP_001640163.1	KEGG: asa:ASA_3895 streptogramin A acetyltransferase
YP_001640164.1	TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: bmb:BruAb2_0345 Asd, aspartate-semialdehyde dehydrogenase
YP_001640167.1	PFAM: GCN5-related N-acetyltransferase; KEGG: mfa:Mfla_1085 GCN5-related N-acetyltransferase
YP_001640168.1	KEGG: xau:Xaut_4558 hypothetical protein
YP_001640169.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: sit:TM1040_0080 cobalamin synthesis protein, P47K
YP_001640170.1	PFAM: regulatory protein TetR; KEGG: rpb:RPB_1805 transcriptional regulator, TetR family
YP_001640171.1	KEGG: smd:Smed_3234 hypothetical protein
YP_001640172.1	KEGG: nmu:Nmul_A1403 alpha amylase, catalytic region; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_001640173.1	amylomaltase; acts to release glucose from maltodextrins
YP_001640174.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bxe:Bxe_B2861 putative alpha-amylase-related protein
YP_001640175.1	KEGG: mes:Meso_2678 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_001640176.1	KEGG: rxy:Rxyl_0316 1,4-alpha-glucan branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain
YP_001640177.1	PFAM: protein of unknown function UPF0060; KEGG: sal:Sala_0701 protein of unknown function UPF0060
YP_001640179.1	KEGG: kra:Krad_4460 radical SAM domain protein
YP_001640180.1	SMART: HhH-GPD family protein; KEGG: ccr:CC_2272 endonuclease III family protein
YP_001640181.1	PFAM: transcription activator effector binding; KEGG: rpc:RPC_0216 transcription activator, effector binding
YP_001640182.1	PFAM: diaminopimelate epimerase; KEGG: rpc:RPC_0215 diaminopimelate epimerase
YP_001640183.1	KEGG: mes:Meso_3390 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB
YP_001640184.1	PFAM: pseudouridine synthase; KEGG: nwi:Nwi_0315 pseudouridine synthase
YP_001640185.1	KEGG: xau:Xaut_0413 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_001640186.1	TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; KEGG: bov:BOV_1862 intracellular septation protein A
YP_001640187.1	PFAM: hydroxyneurosporene synthase; KEGG: rpc:RPC_1288 hydroxyneurosporene synthase
YP_001640188.1	TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rru:Rru_A2984 CrtD protein
YP_001640189.1	PFAM: Polyprenyl synthetase; KEGG: rru:Rru_A2983 polyprenyl synthetase
YP_001640190.1	PFAM: O-methyltransferase family 2; KEGG: rpc:RPC_1291 O-methyltransferase, family 2
YP_001640191.1	TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: rru:Rru_A2981 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide
YP_001640192.1	KEGG: rpb:RPB_4001 chlorophyllide reductase iron protein subunit X; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein
YP_001640193.1	TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase component 1; KEGG: bra:BRADO1619 bacteriochlorophyllide reductase subunit 52.5 kDa chain
YP_001640194.1	TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1; protein of unknown function DUF1197; KEGG: rpa:RPA1524 bacteriochlorophyllide reductase subunit
YP_001640196.1	PFAM: antenna complex alpha/beta subunit; KEGG: bbt:BBta_6433 light harvesting 1 beta subunit
YP_001640197.1	PFAM: antenna complex alpha/beta subunit; KEGG: rpa:RPA1526 light-harvesting complex 1 alpha chain
YP_001640198.1	TIGRFAM: photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; KEGG: hha:Hhal_1605 photosynthetic reaction center L subunit
YP_001640199.1	TIGRFAM: photosynthetic reaction center, M subunit; PFAM: photosynthetic reaction centre protein; KEGG: bra:BRADO1625 photosynthetic reaction center M protein
YP_001640200.1	PFAM: photosynthetic reaction centre cytochrome c subunit; KEGG: hha:Hhal_1603 photosynthetic reaction centre, cytochrome c subunit
YP_001640201.1	KEGG: sme:SMb21466 ABC transporter ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001640202.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: bja:bll7913 HlyD family secretion protein
YP_001640203.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif
YP_001640204.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:bll7547 hypothetical protein
YP_001640205.1	PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_1660 putative alpha/beta hydrolase
YP_001640206.1	KEGG: nwi:Nwi_0986 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta
YP_001640207.1	KEGG: xau:Xaut_2468 porin
YP_001640208.1	PFAM: protein of unknown function DUF1036; KEGG: bja:blr7137 hypothetical protein
YP_001640209.1	PFAM: MOFRL domain protein; KEGG: bja:blr7830 hydroxypyruvate reductase
YP_001640210.1	PFAM: N-formylglutamate amidohydrolase; KEGG: pla:Plav_2032 N-formylglutamate amidohydrolase
YP_001640211.1	PFAM: protein of unknown function DUF1244; KEGG: bja:bll7136 hypothetical protein
YP_001640212.1	KEGG: bra:BRADO1188 hypothetical protein
YP_001640213.1	PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: xau:Xaut_2067 protein of unknown function DUF882
YP_001640214.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: xau:Xaut_2068 peptidoglycan-binding domain 1 protein
YP_001640215.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mes:Meso_2731 two component, sigma54 specific, transcriptional regulator, fis family
YP_001640216.1	TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: xau:Xaut_2070 oligoendopeptidase, PepF/M3 family
YP_001640218.1	TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: rpd:RPD_1413 death-on-curing protein
YP_001640219.1	PFAM: ABC-1 domain protein; KEGG: xau:Xaut_1153 ABC-1 domain protein
YP_001640221.1	PFAM: alanine dehydrogenase/PNT domain protein; KEGG: bja:bll7126 NAD(P)+ transhydrogenase
YP_001640222.1	KEGG: oan:Oant_1385 PntAB, NAD(P) transhydrogenase, alpha2 subunit
YP_001640223.1	PFAM: NAD(P) transhydrogenase beta subunit; KEGG: xau:Xaut_1950 NAD(P)(+) transhydrogenase (AB-specific)
YP_001640224.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: xau:Xaut_4751 single-stranded-DNA-specific exonuclease RecJ
YP_001640225.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bra:BRADO3435 putative transcriptional regulatory protein, Crp/Fnr family
YP_001640226.1	PFAM: HWE histidine kinase; KEGG: rpa:RPA2076 putative signal transduction histidine kinase
YP_001640227.1	PFAM: surface antigen (D15); KEGG: nwi:Nwi_0875 surface antigen (D15)
YP_001640228.1	PFAM: protein of unknown function DUF490; KEGG: nha:Nham_1002 protein of unknown function DUF490
YP_001640231.1	catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide
YP_001640232.1	KEGG: bja:blr5735 transcriptional regulatory protein; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; AAA ATPase
YP_001640233.1	PFAM: Carbohydrate-selective porin OprB; KEGG: rpb:RPB_1735 carbohydrate-selective porin OprB
YP_001640234.1	PFAM: Di-haem cytochrome c peroxidase; KEGG: bja:blr1552 methylamine utilization protein precursor
YP_001640235.1	KEGG: bja:bll1555 hypothetical protein
YP_001640236.1	KEGG: bja:bll5864 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001640237.1	PFAM: manganese containing catalase; KEGG: rsq:Rsph17025_0606 catalase
YP_001640238.1	PFAM: protein of unknown function DUF892; KEGG: ret:RHE_PF00058 hypothetical protein
YP_001640239.1	KEGG: mlo:mlr3555 hypothetical protein
YP_001640240.1	KEGG: bbt:BBta_6772 hypothetical protein
YP_001640241.1	PFAM: CBS domain containing protein; Chloride channel core; KEGG: bms:BR0490 voltage gated chloride channel family protein
YP_001640243.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
YP_001640244.1	KEGG: rle:RL1194 putative transmembrane protein
YP_001640245.1	NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis
YP_001640246.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_001640247.1	PFAM: Septum formation initiator; KEGG: rpc:RPC_2488 septum formation initiator
YP_001640248.1	KEGG: xau:Xaut_3888 pyruvate dehydrogenase (acetyl-transferring); TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component
YP_001640249.1	catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase
YP_001640250.1	KEGG: rpe:RPE_2615 hypothetical protein
YP_001640251.1	KEGG: xau:Xaut_3891 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein
YP_001640252.1	E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_001640254.1	KEGG: mlo:mll1484 hypothetical protein
YP_001640255.1	KEGG: xft:PD1851 endo-1,4-beta-glucanase
YP_001640257.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_3286 ErfK/YbiS/YcfS/YnhG
YP_001640258.1	KEGG: reu:Reut_B3494 L-sorbosone dehydrogenase
YP_001640260.1	PFAM: cell wall hydrolase SleB; KEGG: ret:RHE_PE00255 putative cell wall-associated hydrolase protein
YP_001640261.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_001640262.1	PFAM: cyclase/dehydrase; KEGG: nwi:Nwi_1440 streptomyces cyclase/dehydrase
YP_001640263.1	PFAM: regulatory protein AsnC/Lrp family; Helix-turn-helix type 11 domain protein; KEGG: rle:RL3094 putative AsnC family transcriptional regulator
YP_001640264.1	catalyzes the formation of L-proline from L-ornithine
YP_001640265.1	PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: bxe:Bxe_A0098 3-oxoacyl-(acyl-carrier protein) synthase
YP_001640266.1	KEGG: bmn:BMA10247_3096 hypothetical protein
YP_001640267.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: bxe:Bxe_A0096 3-oxoacyl-(acyl-carrier protein) synthase
YP_001640268.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bpd:BURPS668_3878 oxidoreductase, short chain dehydrogenase/reductase family
YP_001640269.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: slo:Shew_1330 Rieske (2Fe-2S) domain protein
YP_001640270.1	KEGG: bmn:BMA10247_3093 hexapeptide transferase family protein
YP_001640271.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ccr:CC_0119 TPR domain protein
YP_001640272.1	KEGG: rso:RSc0006 hypothetical protein
YP_001640273.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: swi:Swit_4845 ABC transporter related
YP_001640274.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bbt:BBta_0872 putative oxidoreductase with iron-sulfur subunit
YP_001640275.1	PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bja:blr2218 putative xanthine dehydrogenase
YP_001640276.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bja:blr2219 dehydrogenase
YP_001640277.1	PFAM: CinA domain protein; KEGG: xau:Xaut_4307 CinA domain protein
YP_001640278.1	TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MECDP-synthase; KEGG: nwi:Nwi_1442 4-diphosphocytidyl-2C-methyl-D-erythritol synthase
YP_001640279.1	TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: rsh:Rsph17029_1458 putative TIM-barrel protein, nifR3 family
YP_001640280.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: rpd:RPD_2589 ATP-binding region, ATPase-like
YP_001640281.1	KEGG: xau:Xaut_4399 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001640282.1	PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mag:amb0356 DNA or RNA helicase of superfamily II
YP_001640283.1	KEGG: xau:Xaut_4398 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001640284.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: rpa:RPA2595 nitrogen assimilation regulatory protein NtrX-response regulator
YP_001640285.1	TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: xau:Xaut_4393 RNA chaperone Hfq
YP_001640286.1	TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: xau:Xaut_4392 small GTP-binding protein
YP_001640287.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: swi:Swit_2232 sulphate transporter
YP_001640288.1	PFAM: carbonic anhydrase; KEGG: ret:RHE_CH01064 probable carbonic anhydrase protein
YP_001640290.1	PFAM: protein of unknown function DUF305; KEGG: sme:SMc00921 hypothetical signal peptide protein
YP_001640291.1	KEGG: xau:Xaut_3407 hypothetical protein
YP_001640292.1	PFAM: acriflavin resistance protein; KEGG: xau:Xaut_3406 heavy metal efflux pump, CzcA family
YP_001640293.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: xau:Xaut_3405 hypothetical protein
YP_001640294.1	KEGG: fal:FRAAL5625 hypothetical protein; putative esterase/lipase/thioesterase domains
YP_001640295.1	PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator
YP_001640296.1	PFAM: CheW domain protein; KEGG: mag:amb1962 chemotaxis signal transduction protein
YP_001640297.1	PFAM: MCP methyltransferase CheR-type; Tetratricopeptide TPR_2 repeat protein; KEGG: mag:amb1963 chemotaxis protein methyltransferase CheR
YP_001640298.1	PFAM: CheW domain protein; KEGG: rca:Rcas_4203 CheW protein
YP_001640299.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mag:amb1965 methyl-accepting chemotaxis protein
YP_001640300.1	PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: mxa:MXAN_6951 sensor histidine kinase/response regulator
YP_001640301.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: mag:amb1966 chemotaxis response regulator
YP_001640302.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mag:amb1967 signal transduction histidine kinase
YP_001640303.1	KEGG: gox:GOX0269 sensory transduction protein kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_001640304.1	PFAM: metallothionein family 14; KEGG: ava:Ava_C0149 metallothionein, family 14
YP_001640305.1	PFAM: WD-40 repeat protein; cytochrome c class I; KEGG: mes:Meso_2440 WD-40 repeat
YP_001640306.1	PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; KEGG: nha:Nham_3135 molybdopterin binding domain
YP_001640307.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: bja:blr2308 putative molybdopterin biosynthesis protein
YP_001640308.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: bbr:BB2113 molybdopterin-guanine dinucleotide biosynthesis protein B
YP_001640309.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: nha:Nham_3130 MoeA-like, domain I and II
YP_001640310.1	PFAM: regulatory protein LysR; KEGG: pnu:Pnuc_1335 transcriptional regulator of molybdate metabolism, LysR family
YP_001640311.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mag:amb3046 ABC-type tungstate transport system, periplasmic component
YP_001640312.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo2923 probable tungstate ATP-binding protein
YP_001640313.1	PFAM: extracellular solute-binding protein family 1; KEGG: bja:bll6227 putative sulfate transport system substrate-binding protein
YP_001640315.1	PFAM: PRC-barrel domain protein; KEGG: rpa:RPA3568 hypothetical protein
YP_001640316.1	involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan
YP_001640317.1	necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space
YP_001640318.1	KEGG: bja:bsr2670 hypothetical protein
YP_001640319.1	PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rsq:Rsph17025_0780 cystathionine gamma-synthase
YP_001640320.1	PFAM: TspO/MBR family protein; KEGG: xau:Xaut_2163 TspO and MBR like protein
YP_001640321.1	PFAM: response regulator receiver; KEGG: rpb:RPB_0832 response regulator receiver domain protein
YP_001640322.1	TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: xau:Xaut_0023 hypoxanthine phosphoribosyltransferase
YP_001640323.1	TIGRFAM: MJ0042 family finger-like protein; KEGG: bbt:BBta_1175 hypothetical protein
YP_001640324.1	KEGG: xau:Xaut_0022 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001640325.1	PFAM: protein of unknown function DUF214; KEGG: bja:blr1391 cell division protein
YP_001640326.1	PFAM: protein of unknown function DUF218; KEGG: rpd:RPD_0945 protein of unknown function DUF218
YP_001640327.1	PFAM: response regulator receiver; KEGG: bra:BRADO5751 putative response regulator receiver (CheY-like protein)
YP_001640328.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_001640329.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_001640330.1	TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; KEGG: mes:Meso_3455 nicotinate (nicotinamide) nucleotide adenylyltransferase
YP_001640331.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: ccr:CC_3432 iojap-related protein
YP_001640332.1	KEGG: bja:bll5262 hypothetical protein
YP_001640333.1	KEGG: bra:BRADO3253 conserved hypothetical protein; putative transcriptional regulatory protein
YP_001640334.1	PFAM: Aldose 1-epimerase; KEGG: kra:Krad_0621 aldose 1-epimerase
YP_001640335.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: gbe:GbCGDNIH1_1628 transporter
YP_001640336.1	PFAM: periplasmic solute binding protein; KEGG: xau:Xaut_4709 periplasmic solute binding protein
YP_001640337.1	TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: nwi:Nwi_2524 molybdopterin converting factor, subunit 1
YP_001640338.1	TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: xau:Xaut_2345 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_001640339.1	TIGRFAM: excinuclease ABC, C subunit; PFAM: Excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: oan:Oant_2589 excinuclease ABC, C subunit
YP_001640340.1	KEGG: rpe:RPE_0865 hypothetical protein
YP_001640341.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bbt:BBta_1675 putative ErfK/YbiS/YcfS/YnhG protein family
YP_001640342.1	KEGG: xau:Xaut_1890 putative periplasmic ligand-binding sensor protein
YP_001640343.1	KEGG: xau:Xaut_2341 porin
YP_001640344.1	PFAM: protein of unknown function DUF152; KEGG: rpa:RPA4360 DUF152
YP_001640345.1	PFAM: protein of unknown function DUF185; KEGG: xau:Xaut_2549 protein of unknown function DUF185
YP_001640346.1	PFAM: prolipoprotein diacylglyceryl transferase; KEGG: xau:Xaut_2548 prolipoprotein diacylglyceryl transferase
YP_001640347.1	PFAM: MgtC/SapB transporter; KEGG: bvi:Bcep1808_3670 MgtC/SapB transporter
YP_001640348.1	catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate
YP_001640349.1	KEGG: rle:pRL120796 hypothetical protein
YP_001640350.1	PFAM: cell wall hydrolase SleB; KEGG: bmb:BruAb1_0404 hypothetical protein
YP_001640352.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_001640353.1	KEGG: rpa:RPA1050 hypothetical protein
YP_001640354.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: xau:Xaut_1215 ErfK/YbiS/YcfS/YnhG family protein
YP_001640355.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: xau:Xaut_3833 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001640357.1	PFAM: cyclic nucleotide-binding; KEGG: atc:AGR_C_4670 hypothetical protein
YP_001640358.1	KEGG: rru:Rru_A3018 hypothetical protein
YP_001640359.1	PFAM: regulatory protein MarR; transcriptional regulator TrmB; KEGG: sil:SPOA0405 transcriptional regulator, MarR family
YP_001640360.1	KEGG: nwi:Nwi_0614 hypothetical protein
YP_001640361.1	PFAM: beta-lactamase domain protein; KEGG: rle:RL1093 putative beta-lactamase family protein
YP_001640362.1	KEGG: xau:Xaut_4721 hypothetical protein
YP_001640363.1	PFAM: protein of unknown function DUF1328; KEGG: rpb:RPB_2024 protein of unknown function DUF1328
YP_001640364.1	KEGG: rpd:RPD_1367 hypothetical protein
YP_001640365.1	in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media
YP_001640367.1	PFAM: protein of unknown function UPF0153; KEGG: bja:blr5563 hypothetical protein
YP_001640368.1	PFAM: aminotransferase class-III; KEGG: pla:Plav_0797 aminotransferase class-III
YP_001640370.1	PFAM: metallophosphoesterase; KEGG: mlo:mll3894 hypothetical protein
YP_001640372.1	PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_0311 GCN5-related N-acetyltransferase
YP_001640373.1	PFAM: HhH-GPD family protein; AlkA domain protein; KEGG: rru:Rru_A3357 transcriptional regulator, AraC family
YP_001640375.1	TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: rpd:RPD_2949 ribonuclease D
YP_001640377.1	PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: nha:Nham_2011 serine-type D-Ala-D-Ala carboxypeptidase
YP_001640378.1	PFAM: AsmA family protein; KEGG: rpe:RPE_4079 AsmA family protein
YP_001640379.1	KEGG: bbt:BBta_6830 acetyl-CoA/acetoacetyl-CoA transferase, alpha subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase
YP_001640380.1	KEGG: nha:Nham_1247 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase
YP_001640383.1	PFAM: PepSY-associated TM helix domain protein; KEGG: rle:RL0896 putative transmembrane transporter
YP_001640384.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nwi:Nwi_2902 TonB-dependent receptor
YP_001640385.1	KEGG: pde:Pden_1366 hypothetical protein
YP_001640386.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sal:Sala_1001 ABC transporter related
YP_001640387.1	PFAM: transport system permease protein; KEGG: mes:Meso_2065 transport system permease protein
YP_001640388.1	PFAM: periplasmic binding protein; KEGG: rsp:RSP_2403 ABC cobalamin/Fe3+-siderophore transporter, periplasmic substrate-binding subunit
YP_001640389.1	TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: mes:Meso_4551 prevent-host-death family protein
YP_001640390.1	PFAM: PilT protein domain protein; KEGG: sme:SMc00393 hypothetical/unknown protein
YP_001640391.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_001640392.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: plt:Plut_0466 phosphoesterase, PA-phosphatase related
YP_001640393.1	KEGG: atc:AGR_C_2981 hypothetical protein
YP_001640394.1	PFAM: Fmu (Sun) domain protein; KEGG: rpc:RPC_3064 Fmu (Sun)
YP_001640396.1	KEGG: rpc:RPC_0016 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein
YP_001640397.1	KEGG: bja:blr3862 hypothetical protein
YP_001640399.1	KEGG: xau:Xaut_3123 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase
YP_001640400.1	PFAM: cell cycle protein; KEGG: bbt:BBta_6175 essential cell division protein (stabilizes FtsZ ring)
YP_001640401.1	KEGG: xau:Xaut_1191 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain
YP_001640402.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_001640403.1	KEGG: bbt:BBta_6629 putative phage-related transcriptional regulator
YP_001640404.1	KEGG: bbt:BBta_6628 hypothetical protein
YP_001640405.1	KEGG: rpc:RPC_3304 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein
YP_001640406.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_001640407.1	PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: nha:Nham_1284 cell division protein FtsQ
YP_001640408.1	PFAM: cell division protein FtsA; KEGG: bov:BOV_1383 cell division protein FtsA
YP_001640409.1	TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: nwi:Nwi_1058 cell division protein FtsZ
YP_001640410.1	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis
YP_001640411.1	KEGG: rpa:RPA3520 putative lipoprotein
YP_001640413.1	KEGG: acr:Acry_1197 hypothetical protein
YP_001640414.1	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: bja:bll6593 DNA repair protein
YP_001640416.1	PFAM: YiaAB two helix domain protein; KEGG: bbt:BBta_1638 putative exported protein of unknown function with YiaA/B two helix domain
YP_001640417.1	PFAM: PspA/IM30 family protein; KEGG: bja:bll7613 hypothetical protein
YP_001640418.1	TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: rpc:RPC_1201 oxidoreductase alpha (molybdopterin) subunit
YP_001640420.1	KEGG: bov:BOV_2041 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70
YP_001640421.1	TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: ret:RHE_CH00144 molecular chaperone protein, DnaJ family
YP_001640422.1	KEGG: bra:BRADO0162 phospholipid N-methyltransferase
YP_001640423.1	KEGG: bra:BRADO4327 conserved hypothetical protein; putative secreted protein
YP_001640424.1	KEGG: bch:Bcen2424_6240 thymidine phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; thymidine phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain
YP_001640425.1	KEGG: ret:RHE_CH00193 2-deoxyribose-5-phosphate aldolase protein; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase
YP_001640426.1	catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation
YP_001640427.1	TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rsp:RSP_1594 cytidine deaminase
YP_001640428.1	KEGG: xau:Xaut_1414 hypothetical protein
YP_001640429.1	KEGG: rpa:RPA1159 putative tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase
YP_001640430.1	PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: nwi:Nwi_2556 three-deoxy-D-manno-octulosonic-acid transferase
YP_001640431.1	PFAM: protein of unknown function DUF374; KEGG: nwi:Nwi_2557 protein of unknown function DUF374
YP_001640432.1	PFAM: metallophosphoesterase; KEGG: nwi:Nwi_2634 metallophosphoesterase
YP_001640433.1	PFAM: response regulator receiver; KEGG: mmr:Mmar10_0951 response regulator receiver protein
YP_001640434.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: xau:Xaut_0192 putative cold-shock DNA-binding domain protein
YP_001640436.1	PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bja:bll1431 aminopeptidase
YP_001640437.1	PFAM: Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpe:RPE_3757 tetratricopeptide TPR_2 repeat protein
YP_001640438.1	required for 70S ribosome assembly
YP_001640439.1	PFAM: Auxin Efflux Carrier; KEGG: xau:Xaut_3839 auxin efflux carrier
YP_001640440.1	class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine
YP_001640441.1	KEGG: bja:bll2420 hypothetical protein
YP_001640442.1	TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: ret:RHE_CH01648 peptide chain release factor 2 protein
YP_001640443.1	PFAM: peptidase M23B; KEGG: nwi:Nwi_1671 peptidase M23B
YP_001640444.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: smd:Smed_1475 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_001640445.1	KEGG: bra:BRADO3530 hypothetical protein
YP_001640446.1	PFAM: fatty acid desaturase; KEGG: pla:Plav_3282 fatty acid desaturase
YP_001640447.1	KEGG: rpb:RPB_2998 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib
YP_001640448.1	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling
YP_001640449.1	KEGG: cjk:jk1234 hypothetical protein
YP_001640450.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_001640451.1	TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: xau:Xaut_4136 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_001640453.1	PFAM: histone deacetylase superfamily; KEGG: nha:Nham_0780 histone deacetylase superfamily
YP_001640454.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: nwi:Nwi_2891 ErfK/YbiS/YcfS/YnhG
YP_001640455.1	KEGG: mlo:mll0880 hypothetical protein
YP_001640456.1	PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: xau:Xaut_4726 carbamoyl-phosphate synthase L chain ATP-binding
YP_001640457.1	PFAM: AIG2 family protein; KEGG: sen:SACE_6527 hypothetical protein
YP_001640458.1	PFAM: acylphosphatase; KEGG: ath:AT5G03370 acylphosphatase family
YP_001640459.1	PFAM: protein of unknown function DUF599; KEGG: bja:blr5168 hypothetical protein
YP_001640460.1	KEGG: rpc:RPC_3337 hypothetical protein
YP_001640461.1	PFAM: protein of unknown function DUF218; KEGG: xau:Xaut_4460 protein of unknown function DUF218
YP_001640462.1	PFAM: Glutathione S-transferase domain; KEGG: rso:RSc0984 probable GST-related protein
YP_001640463.1	KEGG: ccr:CC_0716 L-lysine 2,3-aminomutase, putative; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein
YP_001640464.1	PFAM: tRNA synthetase class II (D K and N); KEGG: mlo:mlr8260 lysyl-tRNA synthetase
YP_001640465.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_001640466.1	PFAM: protein of unknown function DUF1624; KEGG: atc:AGR_C_2846 hypothetical protein
YP_001640467.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rpb:RPB_2938 cold-shock DNA-binding domain protein
YP_001640468.1	PFAM: protein of unknown function DUF192; KEGG: rpb:RPB_2937 protein of unknown function DUF192
YP_001640469.1	involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; part of a complex with BchI, BchD, and BchH
YP_001640470.1	TIGRFAM: magnesium chelatase accessory protein; PFAM: alpha/beta hydrolase fold; KEGG: rpd:RPD_3767 alpha/beta hydrolase fold
YP_001640471.1	TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bbt:BBta_6445 phytoene dehydrogenase (phytoene desaturase)
YP_001640472.1	PFAM: Squalene/phytoene synthase; KEGG: rru:Rru_A0494 squalene/phytoene synthase
YP_001640473.1	TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: xau:Xaut_4160 urease accessory protein UreG
YP_001640474.1	PFAM: Urease accessory protein UreF; KEGG: xau:Xaut_4159 urease accessory protein UreF
YP_001640475.1	PFAM: UreE urease accessory domain protein; KEGG: bbt:BBta_7007 urease accessory protein UreE
YP_001640476.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
YP_001640477.1	PFAM: protein of unknown function DUF1003; KEGG: mlo:mlr4962 hypothetical protein
YP_001640478.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rpe:RPE_3733 metal dependent phosphohydrolase
YP_001640479.1	KEGG: xau:Xaut_4155 urease, gamma subunit; TIGRFAM: urease, beta subunit; urease, gamma subunit; PFAM: Urease beta subunit; Urease gamma subunit region
YP_001640480.1	PFAM: Urease accessory protein UreD; KEGG: xau:Xaut_4154 urease accessory protein UreD
YP_001640481.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: atc:AGR_C_4534 putative flavin reductase
YP_001640483.1	KEGG: bja:bll6163 hypothetical protein
YP_001640484.1	catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.
YP_001640485.1	KEGG: syr:SynRCC307_1970 translation initiation factor IF-2
YP_001640487.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rle:RL3677 putative UDP-glucuronate 5'-epimerase
YP_001640488.1	KEGG: xau:Xaut_3551 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase
YP_001640489.1	KEGG: bov:BOV_1140 hypothetical protein
YP_001640492.1	TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Threonine dehydratase domain protein; Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pmy:Pmen_4221 threonine dehydratase, biosynthetic
YP_001640493.1	PFAM: type IV pilus assembly PilZ; KEGG: mlo:mll0185 hypothetical protein
YP_001640494.1	PFAM: SlyX family protein; KEGG: nha:Nham_1077 SlyX
YP_001640496.1	TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: bmb:BruAb1_1041 DksA, DnaK suppressor protein
YP_001640497.1	KEGG: bra:BRADO5638 hypothetical protein
YP_001640498.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: bra:BRADO5639 putative membrane bound O-acyl transferase (MBOAT) family protein; putative alginate O-acetyltransferase
YP_001640499.1	KEGG: bbt:BBta_6132 putative exported protein of unknown function
YP_001640500.1	KEGG: rpd:RPD_1678 hypothetical protein
YP_001640501.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum
YP_001640502.1	KEGG: bja:blr5839 hypothetical protein
YP_001640503.1	KEGG: rpb:RPB_3796 hypothetical protein
YP_001640505.1	part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod
YP_001640506.1	TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: nha:Nham_1382 flageller protein FlgA
YP_001640507.1	TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: nha:Nham_1383 flagellar basal-body rod FlgG
YP_001640508.1	FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum
YP_001640509.1	interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring
YP_001640510.1	with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum
YP_001640511.1	KEGG: bbt:BBta_5506 hypothetical protein
YP_001640512.1	KEGG: rpa:RPA3895 hypothetical protein
YP_001640513.1	PFAM: glutathione peroxidase; KEGG: xcb:XC_2825 glutathione peroxidase-like protein
YP_001640514.1	PFAM: Invasion associated locus B family protein; KEGG: nwi:Nwi_0706 invasion associated locus B
YP_001640515.1	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: azo:azo1337 conserved hypothetical peptidoglycan-binding protein
YP_001640516.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pla:Plav_0657 NAD(P)H dehydrogenase (quinone)
YP_001640517.1	PFAM: elongation factor G domain protein; elongation factor G domain IV; KEGG: rpe:RPE_3589 translation elongation factor G
YP_001640518.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: eli:ELI_07635 hypothetical protein
YP_001640519.1	PFAM: sodium:dicarboxylate symporter; KEGG: oan:Oant_3480 sodium:dicarboxylate symporter
YP_001640520.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xau:Xaut_1775 histidine kinase
YP_001640521.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: sme:SMb20613 C4-dicarboxylate transport transcriptional regulatory protein
YP_001640522.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: acr:Acry_2395 diguanylate cyclase
YP_001640523.1	KEGG: mlo:mll7787 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein
YP_001640524.1	TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: mes:Meso_1720 glutamyl-tRNA(Gln) amidotransferase, B subunit
YP_001640525.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bbt:BBta_3476 putative cation efflux family protein, CzcD-like protein
YP_001640528.1	PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bam:Bamb_0893 monooxygenase, FAD-binding
YP_001640529.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
YP_001640530.1	KEGG: tfu:Tfu_2432 hypothetical protein
YP_001640531.1	KEGG: rle:RL2407 putative queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase
YP_001640532.1	KEGG: bra:BRADO5776 conserved hypothetical protein; putative exported protein
YP_001640533.1	KEGG: bra:BRADO5638 hypothetical protein
YP_001640534.1	KEGG: slo:Shew_2180 hypothetical protein
YP_001640535.1	KEGG: slo:Shew_2179 hypothetical protein
YP_001640536.1	KEGG: bbt:BBta_5534 hypothetical protein
YP_001640537.1	PFAM: integrase family protein; KEGG: oan:Oant_0882 phage integrase family protein
YP_001640538.1	KEGG: pna:Pnap_3109 hypothetical protein
YP_001640540.1	SMART: tyrosine protein kinase; serine/threonine protein kinase; leucine-rich repeat-containing protein typical subtype; KEGG: pst:PSPTO_3161 protein kinase, putative
YP_001640541.1	PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: mlo:mll9114 hypothetical protein
YP_001640542.1	PFAM: adenylate cyclase; KEGG: bra:BRADO2715 conserved hypothetical protein; putative CYTH domain
YP_001640543.1	PFAM: ferredoxin; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: bja:blr7256 putative adenylate cyclase
YP_001640544.1	PFAM: alpha/beta hydrolase fold; KEGG: gbe:GbCGDNIH1_1476 hydrolase
YP_001640545.1	KEGG: swi:Swit_5311 catalase
YP_001640547.1	pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient
YP_001640550.1	PFAM: aminotransferase class I and II; KEGG: bja:blr4361 aminotransferase class I
YP_001640552.1	TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: sme:SMc00296 poly3-hydroxybutyrate polymerase protein
YP_001640553.1	PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mxa:MXAN_2260 potassium efflux system family protein
YP_001640554.1	PFAM: regulatory protein LuxR; KEGG: bbt:BBta_5209 putative regulatory protein (LuxR-family)
YP_001640555.1	KEGG: rpe:RPE_4409 glycine--tRNA ligase; TIGRFAM: glycyl-tRNA synthetase, beta subunit
YP_001640556.1	PFAM: protein of unknown function DUF839; KEGG: pde:Pden_3474 protein of unknown function DUF839
YP_001640557.1	KEGG: rle:RL2963 hypothetical protein
YP_001640558.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_001640561.1	PFAM: regulatory protein TetR; KEGG: xau:Xaut_1146 transcriptional regulator, TetR family
YP_001640562.1	PFAM: protein of unknown function DUF1348; KEGG: mlo:mll3526 hypothetical protein
YP_001640563.1	PFAM: acyltransferase 3; KEGG: pat:Patl_1185 acyltransferase 3
YP_001640564.1	PFAM: peptidase S49; KEGG: nwi:Nwi_2589 peptidase S49
YP_001640565.1	PFAM: methyltransferase small; Methyltransferase type 12; KEGG: nwi:Nwi_2590 methyltransferase small
YP_001640566.1	KEGG: sme:SMc00859 hypothetical/unknown protein
YP_001640567.1	PFAM: Polyprenyl synthetase; KEGG: rpd:RPD_1214 farnesyltranstransferase
YP_001640568.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_001640569.1	PFAM: porin; KEGG: xau:Xaut_3823 porin
YP_001640570.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: nha:Nham_3217 tetratricopeptide TPR_2
YP_001640575.1	KEGG: bja:blr5116 Nrd protein
YP_001640576.1	PFAM: band 7 protein; KEGG: sco:SCO5038 integral membrane protein
YP_001640577.1	KEGG: bxe:Bxe_B1928 ABC cyclic peptide efflux pump, fused ATPase and inner membrane subunits; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001640578.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_001640580.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: psb:Psyr_4766 threonine aldolase
YP_001640581.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_2782 putative fused ATP-binding/permease protein
YP_001640582.1	PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_3213 major facilitator superfamily MFS_1
YP_001640583.1	PFAM: PRC-barrel domain protein; KEGG: rpc:RPC_3212 PRC-barrel
YP_001640585.1	PFAM: PRC-barrel domain protein; KEGG: rpa:RPA4758 hypothetical protein
YP_001640586.1	PFAM: SWIB/MDM2 domain protein; KEGG: har:HEAR2779 hypothetical protein
YP_001640587.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pap:PSPA7_4040 probable short-chain dehydrogenase
YP_001640588.1	PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2121 major facilitator superfamily MFS_1
YP_001640589.1	PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO4325 putative alpha/beta hydrolase; putative prolyl aminopeptidase
YP_001640590.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bxe:Bxe_A0271 oxidoreductase
YP_001640591.1	PFAM: Glutathione S-transferase domain; KEGG: mag:amb2655 glutathione S-transferase
YP_001640593.1	PFAM: ETC complex I subunit conserved region; KEGG: smd:Smed_1447 ETC complex I subunit conserved region
YP_001640594.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rme:Rmet_3722 CMP/dCMP deaminase, zinc-binding
YP_001640595.1	KEGG: kra:Krad_0827 radical SAM domain protein
YP_001640596.1	KEGG: xau:Xaut_3225 hypothetical protein
YP_001640597.1	KEGG: bxe:Bxe_B1322 glycogen operon protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_001640598.1	KEGG: bbt:BBta_0880 putative sensor histidine kinase with PAS/PAC and response regulator receiver domains; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001640599.1	KEGG: rle:pRL110309 hypothetical protein
YP_001640600.1	Converts isocitrate to alpha ketoglutarate
YP_001640602.1	PFAM: Formaldehyde-activating enzyme (Fae); KEGG: gbe:GbCGDNIH1_0524 formaldehyde-activating enzyme
YP_001640603.1	TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: atc:AGR_C_3426 hypothetical protein
YP_001640605.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gbe:GbCGDNIH1_0098 alcohol dehydrogenase
YP_001640606.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bbt:BBta_0969 putative methyl-accepting chemotaxis protein
YP_001640607.1	KEGG: sit:TM1040_3505 hypothetical protein
YP_001640608.1	KEGG: mlo:mlr8465 O-acetylhomoserine (thiol)-lyase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_001640609.1	PFAM: response regulator receiver; KEGG: rpd:RPD_3796 response regulator receiver
YP_001640610.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: oan:Oant_3012 protein of unknown function DUF224 cysteine-rich region domain protein
YP_001640611.1	KEGG: bja:bll1143 hypothetical protein
YP_001640612.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: pla:Plav_0472 alpha/beta hydrolase fold-3 domain protein
YP_001640613.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: rle:RL0582 putative ATP-dependent helicase
YP_001640614.1	KEGG: bja:blr1149 putative ICC-like phosphoesterases
YP_001640615.1	KEGG: jan:Jann_0504 hypothetical protein
YP_001640616.1	PFAM: Chloride channel core; KEGG: bbt:BBta_5041 putative H(+)/Cl(-) exchange transporter
YP_001640617.1	PFAM: protein of unknown function DUF1328; KEGG: bra:BRADO2787 conserved hypothetical protein; putative signal peptide
YP_001640618.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mxa:MXAN_0865 oxidoreductase, short chain dehydrogenase/reductase family
YP_001640619.1	KEGG: bja:bll5027 putative thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein
YP_001640620.1	TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: bja:bll5028 N-utilization substance protein B
YP_001640621.1	KEGG: rpb:RPB_2638 riboflavin synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase
YP_001640622.1	PFAM: UbiA prenyltransferase; KEGG: hne:HNE_2070 prenyltransferase, UbiA family
YP_001640623.1	PFAM: GtrA family protein; KEGG: hne:HNE_2071 hypothetical protein
YP_001640624.1	KEGG: mxa:MXAN_1439 hypothetical protein
YP_001640626.1	TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: oan:Oant_2527 riboflavin synthase, alpha subunit
YP_001640627.1	TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: bja:bll5031 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase
YP_001640628.1	PFAM: ATP-cone domain protein; KEGG: xau:Xaut_4277 ATP-cone domain protein
YP_001640629.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_001640630.1	PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: rpd:RPD_0827 H+-transporting two-sector ATPase, B/B' subunit
YP_001640631.1	PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: rpa:RPA0844 putative FoF1 ATP synthase, subunit B'
YP_001640632.1	PFAM: H+transporting two-sector ATPase C subunit; KEGG: oan:Oant_0501 H+transporting two-sector ATPase C subunit
YP_001640633.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
YP_001640634.1	KEGG: smd:Smed_0446 putative FOF1 ATP synthase, subunit I transmembrane protein
YP_001640635.1	KEGG: mes:Meso_0767 DsbA oxidoreductase
YP_001640636.1	PFAM: protein of unknown function DUF1159; KEGG: rpb:RPB_1069 protein of unknown function DUF1159
YP_001640638.1	TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: rpa:RPA4485 adenine glycosylase mutY
YP_001640639.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mes:Meso_0763 DNA methylase N-4/N-6
YP_001640640.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: syn:slr0423 rare lipoprotein A
YP_001640641.1	KEGG: nwi:Nwi_0402 hypothetical protein
YP_001640642.1	KEGG: osa:4344410 Os08g0100500
YP_001640643.1	PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_2599 ABC transporter related
YP_001640644.1	PFAM: porin; KEGG: xau:Xaut_3823 porin
YP_001640645.1	KEGG: xau:Xaut_3825 OmpA/MotB domain protein
YP_001640646.1	PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ret:RHE_CH02493 probable adenylate cyclase protein
YP_001640647.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: rme:Rmet_3828 hydrolases of HD superfamily-like protein
YP_001640648.1	PFAM: Lytic transglycosylase catalytic; KEGG: rpe:RPE_2633 lytic transglycosylase, catalytic
YP_001640649.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_001640650.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_001640651.1	PFAM: protein of unknown function DUF88; KEGG: bja:blr5067 hypothetical protein
YP_001640652.1	TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: ccr:CC_1555 orotate phosphoribosyltransferase
YP_001640654.1	KEGG: bja:bll5065 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region
YP_001640655.1	Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
YP_001640656.1	PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: bbt:BBta_0040 putative NifU protein
YP_001640657.1	PFAM: peptidase M22 glycoprotease; KEGG: xau:Xaut_1822 peptidase M22 glycoprotease
YP_001640658.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_0043 putative ribosomal-protein-alanine acetyltransferase, RimI-like protein
YP_001640659.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: rpd:RPD_3930 phospholipid/glycerol acyltransferase
YP_001640660.1	PFAM: MEKHLA domain protein; KEGG: xac:XAC1124 hypothetical protein
YP_001640662.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
YP_001640663.1	PFAM: PhoH family protein; KEGG: bra:BRADO0042 putative phosphate starvation-inducible protein, PhoH-like protein
YP_001640664.1	PFAM: protein of unknown function UPF0054; KEGG: rpe:RPE_0204 protein of unknown function UPF0054
YP_001640665.1	PFAM: CBS domain containing protein; transporter-associated region; KEGG: mlo:mlr5537 hemolysin
YP_001640666.1	Transfers the fatty acyl group on membrane lipoproteins
YP_001640667.1	KEGG: rno:304859 DEAH (Asp-Glu-Ala-His) box polypeptide 9 (predicted)
YP_001640668.1	PFAM: Catalase domain protein; KEGG: dge:Dgeo_2728 catalase
YP_001640669.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: acr:Acry_0653 transcriptional regulator, LysR family
YP_001640670.1	TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: spe:Spro_0189 putative ammonia monooxygenase
YP_001640671.1	PFAM: diacylglycerol kinase; KEGG: nha:Nham_1484 diacylglycerol kinase
YP_001640674.1	PFAM: metallophosphoesterase; KEGG: sme:SMb20398 hypothetical protein
YP_001640675.1	KEGG: bbt:BBta_5384 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase
YP_001640676.1	PFAM: protein of unknown function DUF323; KEGG: rpc:RPC_1598 protein of unknown function DUF323
YP_001640677.1	KEGG: rpb:RPB_3706 hypothetical protein
YP_001640678.1	KEGG: psb:Psyr_3983 serralysin
YP_001640679.1	PFAM: protein of unknown function DUF779; KEGG: aeh:Mlg_2727 protein of unknown function DUF779
YP_001640680.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bja:blr2809 nitrate reductase large subunit
YP_001640681.1	TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: xau:Xaut_2375 uroporphyrin-III C-methyltransferase
YP_001640682.1	PFAM: electron transport protein SCO1/SenC; KEGG: xau:Xaut_2379 electron transport protein SCO1/SenC
YP_001640683.1	KEGG: xau:Xaut_2382 glycosyl transferase family 2
YP_001640684.1	PFAM: extracellular solute-binding protein family 3; KEGG: nha:Nham_0202 extracellular solute-binding protein, family 3
YP_001640686.1	KEGG: bbt:BBta_5025 hypothetical protein
YP_001640687.1	KEGG: rpd:RPD_0286 cobalt chelatase, pCobT subunit; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit; SMART: von Willebrand factor type A
YP_001640688.1	KEGG: nha:Nham_0498 cobalt chelatase, pCobS small subunit; TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities AAA_5
YP_001640689.1	PFAM: heat shock protein DnaJ domain protein; KEGG: rpc:RPC_0536 heat shock protein DnaJ-like
YP_001640690.1	PFAM: BolA family protein; KEGG: nha:Nham_0495 BolA-like protein
YP_001640691.1	PFAM: Class I peptide chain release factor; KEGG: nha:Nham_3167 class I peptide chain release factor
YP_001640692.1	PFAM: protein of unknown function DUF1275; KEGG: pau:PA14_03150 hypothetical protein
YP_001640693.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rpa:RPA0804 hypothetical protein
YP_001640694.1	KEGG: rpa:RPA0803 putative mRNA 3-end processing factor
YP_001640695.1	PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: bja:bll1144 putative ATP dependent DNA ligase
YP_001640696.1	PFAM: protein of unknown function UPF0047; KEGG: xau:Xaut_1451 protein of unknown function UPF0047
YP_001640697.1	PFAM: protein of unknown function DUF606; KEGG: bur:Bcep18194_B0608 protein of unknown function DUF606
YP_001640698.1	PFAM: protein of unknown function UPF0057; KEGG: aha:AHA_1233 hypothetical protein
YP_001640699.1	PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rpe:RPE_0674 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein
YP_001640700.1	PFAM: EAL domain protein; KEGG: bra:BRADO6920 conserved hypothetical protein, EAL domain protein
YP_001640702.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_001640703.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr1158 acyl-CoA dehydrogenase
YP_001640704.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: rpa:RPA0814 hypothetical protein
YP_001640706.1	KEGG: pat:Patl_3215 hypothetical protein
YP_001640707.1	KEGG: kra:Krad_3574 hypothetical protein
YP_001640708.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: xau:Xaut_2555 phosphoesterase PA-phosphatase related
YP_001640709.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: chu:CHU_1247 probable dehydrogenase
YP_001640711.1	PFAM: peptidase M16 domain protein; KEGG: xau:Xaut_3525 peptidase M16 domain protein
YP_001640712.1	KEGG: xau:Xaut_3524 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit
YP_001640713.1	KEGG: bja:bll2215 hypothetical protein
YP_001640714.1	PFAM: Surfeit locus 1 family protein; KEGG: xau:Xaut_4641 surfeit locus 1 family protein
YP_001640715.1	PFAM: protein of unknown function DUF983; KEGG: mlo:mlr7498 hypothetical protein
YP_001640716.1	PFAM: cytochrome c oxidase subunit III; KEGG: bbt:BBta_0833 cytochrome c oxidase, subunit III
YP_001640717.1	PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: bja:blr1174 putative cytochrome C oxidase assembly protein
YP_001640718.1	KEGG: bbt:BBta_0831 conserved protein CoxF
YP_001640719.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_001640720.1	KEGG: xau:Xaut_4647 cytochrome c oxidase subunit I type; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_001640721.1	KEGG: xau:Xaut_4648 cytochrome c oxidase subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region
YP_001640722.1	TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: rpc:RPC_4562 formate dehydrogenase family accessory protein FdhD
YP_001640723.1	KEGG: bbt:BBta_1372 putative exported protein of unknown function
YP_001640724.1	PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin)
YP_001640725.1	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
YP_001640726.1	PFAM: beta-lactamase domain protein; KEGG: sil:SPO2170 metallo-beta-lactamase family protein
YP_001640727.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: bja:blr5687 two-component sensor histidine kinase
YP_001640728.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bja:blr5688 two-component response regulator
YP_001640729.1	PFAM: protein of unknown function DUF459; KEGG: xau:Xaut_1975 protein of unknown function DUF459
YP_001640730.1	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsq:Rsph17025_0051 lytic murein transglycosylase
YP_001640731.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mes:Meso_0777 UDP-glucose 4-epimerase
YP_001640732.1	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: atc:AGR_L_2114 UTP--glucose-1-phosphate uridylyltransferase
YP_001640733.1	PFAM: N-formylglutamate amidohydrolase; KEGG: nha:Nham_1142 N-formylglutamate amidohydrolase
YP_001640734.1	PFAM: response regulator receiver; KEGG: smd:Smed_2719 response regulator receiver protein
YP_001640735.1	TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: xau:Xaut_3089 glutaredoxin 3
YP_001640736.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: xau:Xaut_3088 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_001640737.1	PFAM: protein of unknown function DUF1178; KEGG: rpa:RPA0600 hypothetical protein
YP_001640738.1	KEGG: ccr:CC_0285 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001640739.1	TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: rpe:RPE_4918 peptide methionine sulfoxide reductase
YP_001640740.1	PFAM: conserved hypothetical protein; KEGG: rpa:RPA0231 hypothetical protein
YP_001640741.1	KEGG: sme:SMc00823 hypothetical protein
YP_001640742.1	D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm
YP_001640743.1	PFAM: PRC-barrel domain protein; KEGG: atc:AGR_C_723 hypothetical protein
YP_001640744.1	KEGG: rpe:RPE_4919 hypothetical protein
YP_001640745.1	PFAM: Na+/H+ antiporter NhaA; KEGG: bov:BOV_0406 Na+/H+ antiporter NhaA
YP_001640746.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rpc:RPC_4876 thioredoxin-like
YP_001640747.1	TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: xau:Xaut_1738 argininosuccinate lyase
YP_001640749.1	KEGG: xau:Xaut_0405 hypothetical protein
YP_001640750.1	KEGG: nha:Nham_1089 hypothetical protein
YP_001640751.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsh:Rsph17029_1725 HAD-superfamily hydrolase, subfamily IA, variant 3
YP_001640752.1	PFAM: Carbamoyltransferase; KEGG: mca:MCA1640 nodulation protein nolNO, putative
YP_001640753.1	KEGG: nwi:Nwi_2478 hypothetical protein
YP_001640754.1	KEGG: mlo:mll7634 2-haloacid halidohydrolase Iva; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase
YP_001640755.1	TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: nha:Nham_1306 integral membrane protein MviN
YP_001640756.1	PFAM: manganese and iron superoxide dismutase; KEGG: rpe:RPE_3840 superoxide dismutase
YP_001640757.1	KEGG: rpc:RPC_1773 hypothetical protein
YP_001640758.1	KEGG: ccr:CC_0836 sensor histidine kinase, putative; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001640759.1	PFAM: glycosyl transferase family 2; KEGG: mca:MCA0619 glycosyl transferase, group 2 family protein
YP_001640760.1	KEGG: bch:Bcen2424_0875 rhamnosyltransferase
YP_001640761.1	PFAM: peptidase M48 Ste24p; KEGG: xau:Xaut_2231 peptidase M48 Ste24p
YP_001640762.1	KEGG: bbt:BBta_7541 hypothetical protein
YP_001640763.1	PFAM: helix-turn-helix domain protein; KEGG: oan:Oant_0753 transcriptional regulator, XRE family
YP_001640764.1	PFAM: S-adenosylmethionine synthetase; KEGG: xau:Xaut_1816 methionine adenosyltransferase
YP_001640765.1	KEGG: pla:Plav_3624 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase
YP_001640766.1	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity
YP_001640767.1	PFAM: oxidoreductase molybdopterin binding; KEGG: tbd:Tbd_2349 hypothetical protein
YP_001640768.1	KEGG: rle:RL3018 putative transmembrane b-type cytochrome protein
YP_001640770.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
YP_001640771.1	KEGG: nwi:Nwi_2008 dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase
YP_001640772.1	PFAM: protein of unknown function DUF205; KEGG: sme:SMc01362 hypothetical transmembrane protein
YP_001640773.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: rpe:RPE_3377 DNA protecting protein DprA
YP_001640774.1	PFAM: lipolytic protein G-D-S-L family; KEGG: nha:Nham_0220 lipolytic enzyme, G-D-S-L
YP_001640776.1	PFAM: ThiJ/PfpI domain protein; KEGG: pfo:Pfl_1835 ThiJ/PfpI
YP_001640777.1	PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: pla:Plav_2841 Holliday junction resolvase YqgF
YP_001640780.1	TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: rpc:RPC_2260 glutamyl-tRNA(Gln) amidotransferase, C subunit
YP_001640781.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_001640783.1	PFAM: Excinuclease ABC C subunit domain protein; KEGG: rpc:RPC_0376 excinuclease ABC, C subunit-like
YP_001640784.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rpa:RPA1498 RND multidrug efflux transporter MexD
YP_001640785.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpa:RPA2735 putative RND multidrug efflux membrane fusion protein MexC precursor
YP_001640787.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpa:RPA1617 ErfK/YbiS/YcfS/YnhG
YP_001640788.1	KEGG: rsq:Rsph17025_0776 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein
YP_001640789.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: mlo:mlr6892 hypothetical protein
YP_001640791.1	PFAM: Usg family protein; KEGG: bja:bsl5624 hypothetical protein
YP_001640792.1	TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: bbt:BBta_2521 60 kDa chaperonin (protein Cpn60)
YP_001640793.1	PFAM: chaperonin Cpn10; KEGG: smd:Smed_1282 chaperonin Cpn10
YP_001640794.1	PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: xau:Xaut_2768 acyl-CoA dehydrogenase type 2 domain
YP_001640795.1	KEGG: bxe:Bxe_C0340 hypothetical protein
YP_001640796.1	KEGG: csa:Csal_0183 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein
YP_001640797.1	PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: bbt:BBta_4886 putative sulfite oxidase (SoxC)
YP_001640798.1	KEGG: bch:Bcen2424_6593 cytochrome c, class I
YP_001640799.1	KEGG: ppu:PP_3229 periplasmic aliphatic sulfonate-binding protein, putative; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3
YP_001640800.1	PFAM: luciferase family protein; KEGG: bbt:BBta_3300 putative alkanesulfonate monooxygenase
YP_001640801.1	TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: gbe:GbCGDNIH1_1636 xanthine permease
YP_001640802.1	PFAM: DSBA oxidoreductase; KEGG: ani:AN6936.2 hypothetical protein
YP_001640803.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pae:PA2294 putative sulfonate transport system ATP-binding protein
YP_001640804.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppu:PP_0208 nitrate ABC transporter, permease protein, putative
YP_001640805.1	KEGG: bbt:BBta_4880 putative ABC transporter, substrate-binding protein
YP_001640806.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: nwi:Nwi_0675 cyclic nucleotide-binding protein
YP_001640807.1	PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: bbt:BBta_4882 hypothetical protein
YP_001640808.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nwi:Nwi_0677 4Fe-4S ferredoxin, iron-sulfur binding
YP_001640809.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbt:BBta_4884 putative fumarate reductase/succinate dehydrogenase, flavoprotein subunit
YP_001640810.1	PFAM: protein of unknown function DUF971; KEGG: bbt:BBta_4885 hypothetical protein
YP_001640812.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: smd:Smed_2842 diguanylate cyclase/phosphodiesterase
YP_001640813.1	KEGG: ret:RHE_PE00106 putative methyltransferase protein
YP_001640814.1	PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: rru:Rru_A0942 GreA/GreB family elongation factor
YP_001640815.1	KEGG: rpd:RPD_0852 hypothetical protein
YP_001640816.1	KEGG: xau:Xaut_2147 hypothetical protein
YP_001640819.1	KEGG: mes:Meso_1904 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001640820.1	PFAM: response regulator receiver; KEGG: rpa:RPA1481 response regulator receiver (CheY-like protein)
YP_001640821.1	KEGG: rpc:RPC_3529 signal transduction histidine kinase
YP_001640822.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_4059 transcriptional regulator, LysR family
YP_001640823.1	PFAM: Extracellular ligand-binding receptor; KEGG: xau:Xaut_4060 extracellular ligand-binding receptor
YP_001640824.1	PFAM: inner-membrane translocator; KEGG: xau:Xaut_4061 inner-membrane translocator
YP_001640825.1	PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_4062 ABC transporter related
YP_001640826.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_4063 ABC transporter related
YP_001640827.1	PFAM: cyclase family protein; KEGG: xau:Xaut_4064 cyclase family protein
YP_001640828.1	PFAM: Amidase; KEGG: xau:Xaut_4065 amidase
YP_001640829.1	aliphatic amidase; catalyzes the hydrolysis of short-chain aliphatic amides to their organic acids and can also transfer the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates
YP_001640830.1	PFAM: Carbohydrate-selective porin OprB; KEGG: gbe:GbCGDNIH1_1489 porin
YP_001640831.1	TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: gbe:GbCGDNIH1_1830 putative regulatory protein FmdB
YP_001640832.1	PFAM: Acetamidase/Formamidase; KEGG: rpe:RPE_4597 formamidase
YP_001640833.1	PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO5867 homoserine O-acetyltransferase
YP_001640834.1	KEGG: rpa:RPA1254 putative ATP-binding component of ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001640835.1	TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: bja:blr0970 ABC transporter ATP-binding protein
YP_001640836.1	TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: rpa:RPA1252 putative high-affinity branched-chain amino acid transport system permease protein
YP_001640837.1	TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: bja:blr0968 ABC transporter permease protein
YP_001640838.1	KEGG: bja:blr0967 ABC transporter substrate-binding protein
YP_001640839.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bra:BRADO6898 sensor histidine kinase with a response regulator receiver domain (two-component signal transduction system)
YP_001640840.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rpa:RPA1248 two-component transcriptional regulator, LuxR family
YP_001640841.1	PFAM: Invasion associated locus B family protein; KEGG: rpd:RPD_2626 invasion associated locus B
YP_001640842.1	catalyzes the formation of precorrin 6x from precorrin 5
YP_001640843.1	KEGG: rso:RS03125 probable transmembrane protein
YP_001640844.1	KEGG: psb:Psyr_3532 PAS
YP_001640845.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bja:blr8197 probable partition protein
YP_001640847.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: nwi:Nwi_1466 rare lipoprotein A
YP_001640848.1	KEGG: smd:Smed_4175 hypothetical protein
YP_001640849.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: mes:Meso_1815 iron-sulfur cluster assembly accessory protein
YP_001640850.1	KEGG: mes:Meso_1814 putative deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_001640851.1	KEGG: cel:T20B6.3 T20B6.3
YP_001640852.1	PFAM: thioesterase superfamily protein; KEGG: bpd:BURPS668_1648 thioesterase family protein
YP_001640853.1	KEGG: nha:Nham_1758 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase
YP_001640854.1	PFAM: Sporulation domain protein; KEGG: rpd:RPD_2794 sporulation related
YP_001640855.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: ccr:CC_2006 glycosyl hydrolase, family 3
YP_001640856.1	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes
YP_001640857.1	TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: xau:Xaut_4406 twin-arginine translocation protein, TatB subunit
YP_001640858.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: bja:bll4749 SEC-independent protein translocase protein
YP_001640859.1	KEGG: ade:Adeh_2310 hypothetical protein
YP_001640860.1	PFAM: major facilitator superfamily MFS_1; KEGG: azo:azo0581 putative transmembrane efflux precursor protein
YP_001640861.1	PFAM: NADPH-dependent FMN reductase; KEGG: rsq:Rsph17025_0771 NADPH-dependent FMN reductase
YP_001640862.1	KEGG: mlo:mll4559 aliphatic sulfonate binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3
YP_001640863.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_1867 putative ABC transporter, permease protein
YP_001640864.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:RL2767 putative aliphatic sulfonates transport ATP-binding component of ABC transporter
YP_001640865.1	PFAM: luciferase family protein; KEGG: gbe:GbCGDNIH1_0256 alkanesulfonate monooxygenase
YP_001640866.1	KEGG: bbt:BBta_2507 putative ABC transporter, substrate binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3
YP_001640867.1	KEGG: bbt:BBta_3178 putative ABC transporter, substrate-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3
YP_001640868.1	KEGG: gbe:GbCGDNIH1_0532 pyridine nucleotide-disulfide oxidoreductase family
YP_001640869.1	KEGG: pde:Pden_4788 hypothetical protein
YP_001640870.1	KEGG: bja:blr1215 hypothetical protein
YP_001640871.1	KEGG: xau:Xaut_3913 hypothetical protein
YP_001640872.1	PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: bbt:BBta_2947 hypothetical protein
YP_001640873.1	PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bja:blr2978 hypothetical protein
YP_001640874.1	PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: rpa:RPA3752 transglutaminase-like domain
YP_001640875.1	PFAM: regulatory protein TetR; KEGG: rle:RL0480 putative TetR family transcriptional regulator
YP_001640876.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpa:RPA1853 putative short-chain dehydrogenase
YP_001640877.1	PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_3226 drug resistance transporter, Bcr/CflA subfamily
YP_001640878.1	KEGG: nha:Nham_0661 hypothetical protein
YP_001640879.1	PFAM: beta-lactamase; KEGG: sus:Acid_2490 beta-lactamase
YP_001640880.1	PFAM: Aldehyde Dehydrogenase_; KEGG: mlo:mll6639 aldehyde dehydrogenase
YP_001640881.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_2742 methyl-accepting chemotaxis sensory transducer
YP_001640882.1	PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: atc:AGR_C_3079 hypothetical protein
YP_001640883.1	PFAM: AMP-dependent synthetase and ligase; KEGG: atc:AGR_C_3078 hypothetical protein
YP_001640885.1	PFAM: DoxX family protein; KEGG: xau:Xaut_0302 DoxX family protein
YP_001640886.1	PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_0838 major facilitator superfamily MFS_1
YP_001640887.1	KEGG: bra:BRADO5687 conserved hypothetical protein; putative exported protein
YP_001640888.1	PFAM: amidohydrolase; KEGG: mes:Meso_1082 amidohydrolase
YP_001640889.1	PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: xau:Xaut_0837 ribosomal RNA methyltransferase RrmJ/FtsJ
YP_001640890.1	PFAM: Ppx/GppA phosphatase; KEGG: ret:RHE_CH00788 exopolyphosphatase protein
YP_001640891.1	PFAM: glycosyl transferase family 2; KEGG: rba:RB11941 conserved hypothetical protein-putative glycosyl transferase
YP_001640892.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: rba:RB11942 conserved hypothetical protein-putative acyltransferase
YP_001640893.1	TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rba:RB11943 phytoene dehydrogenase
YP_001640894.1	PFAM: glutamine amidotransferase class-I; KEGG: bbt:BBta_7211 putative glutamine amidotransferase, class-I
YP_001640895.1	PFAM: ABC-2 type transporter; KEGG: bra:BRADO6504 putative ABC transporter (permease protein)
YP_001640896.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO6503 putative ABC transporter (ATP-binding protein)
YP_001640897.1	KEGG: hha:Hhal_1327 hypothetical protein
YP_001640898.1	TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rba:RB10270 phytoene dehydrogenase
YP_001640899.1	KEGG: bmb:BruAb1_1523 hypothetical protein
YP_001640900.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mes:Meso_2208 tRNA/rRNA methyltransferase (SpoU)
YP_001640901.1	PFAM: MaoC domain protein dehydratase; KEGG: xau:Xaut_2482 MaoC domain protein dehydratase
YP_001640902.1	PFAM: cation efflux protein; KEGG: mes:Meso_4140 putative transporter
YP_001640903.1	PFAM: metallophosphoesterase; KEGG: eba:ebA6067 predicted calcineurin-like phosphoesterase
YP_001640905.1	KEGG: pau:PA14_24370 hypothetical protein
YP_001640906.1	PFAM: Glutathione S-transferase domain; KEGG: vei:Veis_2181 glutathione S-transferase, N-terminal domain
YP_001640908.1	PFAM: amidinotransferase; KEGG: nwi:Nwi_2321 amidinotransferase
YP_001640909.1	TIGRFAM: membrane protein; PFAM: conserved hypothetical protein; KEGG: noc:Noc_1748 conserved hypothetical protein 374
YP_001640910.1	PFAM: toluene tolerance family protein; KEGG: gbe:GbCGDNIH1_2403 toluene transport system Ttg2D protein
YP_001640911.1	KEGG: bps:BPSL0293 putative glucosyltransferase
YP_001640912.1	KEGG: zmo:ZMO0973 Fe-S oxidoreductase; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001640913.1	TIGRFAM: hopanoid biosynthesis associated protein HpnK; PFAM: YdjC family protein; KEGG: zmo:ZMO0974 hypothetical protein
YP_001640914.1	KEGG: bmb:BruAb2_0848 hypothetical protein
YP_001640915.1	TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: rpe:RPE_1817 hypothetical protein
YP_001640916.1	TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; KEGG: reh:H16_B2170 predicted Fe-S oxidoreductase
YP_001640917.1	KEGG: bja:blr3005 hypothetical protein
YP_001640918.1	PFAM: polysaccharide export protein; KEGG: xau:Xaut_3820 polysaccharide export protein
YP_001640919.1	KEGG: bra:BRADO5812 putative bifunctional: 6-phosphogluconolactonase (N-terminal) (Pgl); D-gluconate kinase (C-terminal); TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase
YP_001640920.1	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: rpa:RPA3639 Cof-subfamily: Cof-like hydrolase
YP_001640921.1	PFAM: Lytic transglycosylase catalytic; KEGG: bja:blr6654 probable transglycosylase
YP_001640922.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_001640924.1	TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: xau:Xaut_3109 polyhydroxyalkonate synthesis repressor, PhaR
YP_001640925.1	KEGG: bra:BRADO0562 acetyl-CoA acetyltransferase with thiolase domain (acetoacetyl-CoA thiolase); TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase
YP_001640926.1	TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xau:Xaut_3107 acetoacetyl-CoA reductase
YP_001640927.1	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA
YP_001640928.1	PFAM: peptidase M29 aminopeptidase II; KEGG: mes:Meso_3021 peptidase M29, aminopeptidase II
YP_001640929.1	KEGG: ret:RHE_CH00014 hypothetical protein
YP_001640930.1	PFAM: FAD linked oxidase domain protein; KEGG: xau:Xaut_2518 FAD linked oxidase domain protein
YP_001640931.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reh:H16_A0361 putative fumarylacetoacetat hydroxylase
YP_001640932.1	PFAM: NUDIX hydrolase; KEGG: mes:Meso_2186 NUDIX hydrolase
YP_001640933.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ret:RHE_CH01517 putative nucleotide sugar transaminase protein
YP_001640934.1	PFAM: Resolvase domain; KEGG: bja:bll5010 putative resolvase
YP_001640935.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_0552 transcriptional regulator of molybdate metabolism, LysR family
YP_001640936.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bra:BRADO3435 putative transcriptional regulatory protein, Crp/Fnr family
YP_001640938.1	KEGG: bra:BRADO3416 hypothetical protein
YP_001640940.1	PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: rpb:RPB_0305 putative acyl-CoA dehydrogenase
YP_001640941.1	PFAM: OsmC family protein; KEGG: xau:Xaut_2612 OsmC family protein
YP_001640942.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_0309 binding-protein-dependent transport systems inner membrane component
YP_001640943.1	KEGG: rpb:RPB_0308 twin-arginine translocation pathway signal
YP_001640944.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_0307 ABC transporter related
YP_001640945.1	PFAM: Carbohydrate-selective porin OprB; KEGG: gbe:GbCGDNIH1_1489 porin
YP_001640946.1	KEGG: bbt:BBta_2543 putative monooxygenase
YP_001640947.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_2544 putative branched-chain amino acid ABC transporter, ATP-binding protein
YP_001640948.1	PFAM: inner-membrane translocator; KEGG: bbt:BBta_2545 putative branched-chain amino acid ABC transporter, permease protein
YP_001640949.1	PFAM: inner-membrane translocator; KEGG: bbt:BBta_2546 putative branched-chain amino acid ABC transporter, permease protein
YP_001640950.1	KEGG: bbt:BBta_2547 hypothetical protein
YP_001640951.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_2548 high-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding protein)
YP_001640952.1	PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: xau:Xaut_2768 acyl-CoA dehydrogenase type 2 domain
YP_001640954.1	PFAM: heat shock protein Hsp20; KEGG: nha:Nham_1917 heat shock protein HSP20
YP_001640955.1	KEGG: bra:BRADO3435 putative transcriptional regulatory protein, Crp/Fnr family
YP_001640956.1	PFAM: UspA domain protein; KEGG: nwi:Nwi_1035 universal stress protein, UspA
YP_001640957.1	KEGG: bja:bll7960 hypothetical protein
YP_001640958.1	PFAM: transport-associated; KEGG: sme:SMa1153 hypothetical protein
YP_001640960.1	PFAM: UspA domain protein; KEGG: sme:SMa1158 hypothetical protein
YP_001640961.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rpd:RPD_1340 cyclic nucleotide-binding
YP_001640962.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mlo:mll6606 response regulator FixJ
YP_001640963.1	KEGG: bja:bll2760 two-component oxygen-sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001640964.1	PFAM: UspA domain protein; KEGG: xau:Xaut_3179 UspA domain protein
YP_001640965.1	PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: azo:azo3686 probable response regulator
YP_001640966.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: dar:Daro_3350 response regulator receiver:ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal:Hpt
YP_001640967.1	KEGG: bbt:BBta_2204 hypothetical protein
YP_001640968.1	PFAM: TadE family protein; KEGG: pla:Plav_0225 TadE family protein
YP_001640969.1	PFAM: TadE family protein; KEGG: acr:Acry_2979 TadE family protein
YP_001640970.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: xau:Xaut_0669 alcohol dehydrogenase zinc-binding domain protein
YP_001640972.1	KEGG: acr:Acry_1987 hypothetical protein
YP_001640973.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: acr:Acry_3536 UMUC domain protein DNA-repair protein
YP_001640974.1	KEGG: syf:Synpcc7942_1549 DNA polymerase V
YP_001640976.1	PFAM: helix-turn-helix domain protein; KEGG: mes:Meso_3923 transcriptional regulator, XRE family
YP_001640977.1	PFAM: Hemolysin-type calcium-binding region; KEGG: rsh:Rsph17029_4185 Na-Ca exchanger/integrin-beta4
YP_001640980.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bja:blr6181 transcriptional regulatory protein
YP_001640982.1	PFAM: PAS fold-3 domain protein; KEGG: nmu:Nmul_A2207 multi-sensor hybrid histidine kinase
YP_001640984.1	PFAM: transposase IS3/IS911 family protein; KEGG: bbt:BBta_p0209 putative transposase IS3/IS911 family
YP_001640985.1	PFAM: Integrase catalytic region; KEGG: bbt:BBta_p0210 putative insertion element protein
YP_001640986.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_3446 ISHne3, transposase
YP_001640987.1	KEGG: mlo:mlr8545 hypothetical protein
YP_001640988.1	KEGG: bbr:BB3486 hypothetical protein
YP_001640989.1	PFAM: NLP/P60 protein; KEGG: bvi:Bcep1808_3223 hypothetical protein
YP_001640993.1	KEGG: sme:SMc04265 hypothetical protein
YP_001640994.1	PFAM: HNH endonuclease; KEGG: nar:Saro_0644 HNH endonuclease
YP_001640998.1	PFAM: transposase IS3/IS911 family protein; KEGG: aav:Aave_2936 transposase IS3/IS911 family protein
YP_001641002.1	KEGG: pna:Pnap_4034 putative transposase of insertion sequence ISRm10-1
YP_001641003.1	PFAM: regulatory protein Crp; KEGG: ret:RHE_PF00508 nitrogen fixation transcriptional regulator protein, Fnr/CRP family
YP_001641004.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mlo:mll6759 putative nucleotide sugar epimerase
YP_001641005.1	KEGG: ppd:Ppro_2466 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase
YP_001641006.1	PFAM: protein of unknown function DUF218; KEGG: xau:Xaut_4460 protein of unknown function DUF218
YP_001641007.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: mlo:mlr6756 exopolysaccharide biosynthesis protein
YP_001641008.1	PFAM: Nucleotidyl transferase; KEGG: mlo:mlr6764 mannose-1-phosphate guanyltransferase
YP_001641009.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mlo:mlr6765 similar to spore coat polysaccharide biosynthesis protein SpsC
YP_001641010.1	PFAM: sugar transferase; KEGG: mlo:mlr6766 putative transferase
YP_001641011.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mlo:mlr6767 probable UDP-glucose 4-epimerase
YP_001641012.1	PFAM: polysaccharide export protein; KEGG: bja:blr6311 putative exopolysaccharide production protein
YP_001641015.1	PFAM: glycosyl transferase family 2; KEGG: mpt:Mpe_A0604 putative glycosyl transferase
YP_001641016.1	PFAM: glycosyl transferase group 1; KEGG: mca:MCA1433 glycosyl transferase, group 1 family protein
YP_001641017.1	PFAM: glycosyl transferase group 1; KEGG: sth:STH2712 putative glycosyl transferase
YP_001641018.1	KEGG: dde:Dde_0836 CapK related-protein
YP_001641019.1	PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_3089 glycosyl transferase group 1
YP_001641020.1	PFAM: glycosyl transferase group 1; KEGG: pin:Ping_0456 glycosyl transferase, group 1
YP_001641021.1	PFAM: O-antigen polymerase; KEGG: rxy:Rxyl_1940 O-antigen polymerase
YP_001641022.1	PFAM: polysaccharide biosynthesis protein; KEGG: mem:Memar_0954 polysaccharide biosynthesis protein
YP_001641024.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mul:MUL_4678 hypothetical protein
YP_001641025.1	KEGG: bth:BT_4183 pectate lyase L precursor
YP_001641026.1	PFAM: Hemolysin-type calcium-binding region; KEGG: afm:AFUA_3G14890 pectate lyase, putative
YP_001641027.1	PFAM: regulatory protein LuxR; KEGG: bja:blr6291 transcriptional regulatory protein
YP_001641028.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mlo:mll6762 two component system response regulator
YP_001641029.1	KEGG: rpb:RPB_1542 acyltransferase 3
YP_001641030.1	PFAM: domain of unknown function DUF1738; KEGG: xau:Xaut_3034 domain of unknown function DUF1738
YP_001641034.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pmu:PM1075 unknown
YP_001641035.1	PFAM: protein of unknown function DUF159; KEGG: xau:Xaut_3740 protein of unknown function DUF159
YP_001641036.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: xau:Xaut_3409 ErfK/YbiS/YcfS/YnhG family protein
YP_001641041.1	KEGG: pfl:PFL_0702 lipoprotein, putative
YP_001641045.1	Transcriptional regulator that represses the manganese transporter MntH when manganese is present
YP_001641046.1	TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: xcb:XC_1947 manganese transport protein
YP_001641047.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS05312 probable transcription regulator protein
YP_001641048.1	PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: esa:ESA_04130 hypothetical protein
YP_001641049.1	TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: nwi:Nwi_2798 succinate dehydrogenase, cytochrome b subunit
YP_001641050.1	TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: xau:Xaut_1966 succinate dehydrogenase hydrophobic membrane anchor
YP_001641051.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
YP_001641053.1	KEGG: atc:AGR_C_4790 succinate dehydrogenase iron-sulfur protein subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin
YP_001641054.1	KEGG: mes:Meso_3393 outer membrane lipoprotein omp19
YP_001641055.1	KEGG: bja:bll7745 hypothetical protein
YP_001641056.1	KEGG: mes:Meso_2737 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS)
YP_001641058.1	PFAM: protein of unknown function DUF606; KEGG: pen:PSEEN0988 hypothetical protein
YP_001641059.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pla:Plav_0639 enoyl-CoA hydratase/isomerase
YP_001641060.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gvi:glr2355 probable oxidoreductase
YP_001641061.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_0020 short-chain dehydrogenase/reductase SDR
YP_001641062.1	TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: rpa:RPA4441 putative magnesium/cobalt transport protein
YP_001641063.1	PFAM: protein of unknown function DUF892; KEGG: gbe:GbCGDNIH1_0093 protein YciF
YP_001641064.1	KEGG: ilo:IL2343 methyl-accepting chemotaxis protein (contains HAMP domain)
YP_001641065.1	PFAM: chemotaxis sensory transducer; KEGG: bbt:BBta_0969 putative methyl-accepting chemotaxis protein
YP_001641066.1	KEGG: bra:BRADO6018 conserved hypothetical protein; putative signal peptide
YP_001641068.1	KEGG: rpe:RPE_1591 hypothetical protein
YP_001641069.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: atc:AGR_L_1698 hypothetical protein
YP_001641070.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: atc:AGR_L_1696 hypothetical protein
YP_001641071.1	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: bra:BRADO0236 putative sensor histidine kinase with a response regulator receiver domain
YP_001641072.1	PFAM: regulatory protein TetR; KEGG: gbe:GbCGDNIH1_1777 transcriptional regulator, TetR family
YP_001641074.1	KEGG: eli:ELI_11695 endonuclease III; PFAM: HhH-GPD family protein; SMART: iron-sulfur cluster loop
YP_001641075.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr1253 dehydrogenase
YP_001641076.1	PFAM: beta-Ig-H3/fasciclin; KEGG: xom:XOO_0610 hypothetical protein
YP_001641077.1	PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_C6920 alpha/beta hydrolase
YP_001641078.1	PFAM: GAF domain protein; KEGG: swi:Swit_4430 GAF sensor hybrid histidine kinase
YP_001641080.1	KEGG: bbt:BBta_7551 hypothetical protein
YP_001641081.1	KEGG: bbt:BBta_4359 hypothetical protein
YP_001641082.1	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll1464 molybdenum transport protein modB
YP_001641083.1	PFAM: Glutathione S-transferase domain; KEGG: rpb:RPB_0021 glutathione S-transferase-like
YP_001641084.1	KEGG: mlo:mll1463 molybdenum transport protein modC; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase
YP_001641086.1	KEGG: atc:AGR_L_1193 hypothetical protein
YP_001641087.1	KEGG: bbt:BBta_3827 4-hydroxythreonine-4-phosphate dehydrogenase (4-(phosphohydroxy)-L-threonine dehydrogenase); TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA
YP_001641088.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
YP_001641089.1	KEGG: maq:Maqu_0017 secretion protein HlyD family protein
YP_001641090.1	PFAM: glycosyl transferase family 2; chitin synthase; KEGG: vpa:VPA0393 hypothetical protein
YP_001641091.1	PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_5011 putative alpha/beta hydrolase
YP_001641092.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sme:SMb20070 putative sulfate permease protein
YP_001641093.1	PFAM: LrgB family protein; KEGG: rpb:RPB_0492 LrgB-like protein
YP_001641094.1	PFAM: LrgA family protein; KEGG: bja:blr1347 hypothetical protein
YP_001641095.1	PFAM: protein of unknown function DUF1332; KEGG: mlo:mll4217 hypothetical protein
YP_001641096.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: acr:Acry_2045 methyltransferase type 11
YP_001641097.1	PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: rpc:RPC_2311 organic solvent tolerance protein
YP_001641098.1	PFAM: permease YjgP/YjgQ family protein; KEGG: xau:Xaut_2837 permease YjgP/YjgQ family protein
YP_001641099.1	PFAM: permease YjgP/YjgQ family protein; KEGG: nwi:Nwi_1677 permease YjgP/YjgQ
YP_001641100.1	PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: nwi:Nwi_1676 leucyl aminopeptidase
YP_001641102.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll1319 acyl-CoA synthase
YP_001641103.1	PFAM: MscS Mechanosensitive ion channel; KEGG: pla:Plav_2855 MscS mechanosensitive ion channel
YP_001641104.1	PFAM: DSBA oxidoreductase; KEGG: xau:Xaut_3499 DsbA oxidoreductase
YP_001641105.1	KEGG: rpd:RPD_3546 uncharacterized domain HDIG; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_001641106.1	PFAM: phosphate-selective porin O and P; KEGG: noc:Noc_2418 phosphate-selective porin O and P
YP_001641107.1	PFAM: aminotransferase class I and II; KEGG: rpa:RPA2446 putative aminotransferase
YP_001641108.1	TIGRFAM: ribonuclease, Rne/Rng family; KEGG: xau:Xaut_4668 ribonuclease, Rne/Rng family
YP_001641110.1	PFAM: cell wall hydrolase/autolysin; KEGG: rpe:RPE_2978 N-acetylmuramoyl-L-alanine amidase
YP_001641111.1	KEGG: rpa:RPA2452 putative penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_001641112.1	PFAM: luciferase family protein; KEGG: atc:AGR_pAT_784 hypothetical protein
YP_001641113.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mlo:mlr5225 dibenzothiophene desulfurization enzyme
YP_001641114.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: sme:SMb21337 putative iron-sulfur-binding protein, probably subunit of an oxidoreductase like aldehyde oxidase or xanthine dehydrogenase
YP_001641115.1	PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: xac:XAC2894 oxidoreductase
YP_001641116.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: smd:Smed_4735 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding
YP_001641118.1	PFAM: Xanthine/uracil/vitamin C permease; KEGG: reu:Reut_B5339 xanthine/uracil/vitamin C permease:sulphate transporter
YP_001641119.1	PFAM: luciferase family protein; KEGG: bja:bll1244 flavin dependant oxidoreductase
YP_001641121.1	KEGG: mxa:MXAN_6138 RibD domain protein
YP_001641122.1	KEGG: wsu:WS1052 hypothetical protein
YP_001641123.1	involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan
YP_001641124.1	necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space
YP_001641125.1	KEGG: swi:Swit_5097 integrase, catalytic region
YP_001641126.1	KEGG: gbe:GbCGDNIH1_1045 transposase
YP_001641127.1	KEGG: gox:GOX2659 transposase
YP_001641128.1	KEGG: xau:Xaut_3551 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase
YP_001641129.1	TIGRFAM: methyltransferase FkbM family; KEGG: mag:amb2566 SAM-dependent methyltransferase
YP_001641130.1	KEGG: gox:GOX0592 hypothetical protein
YP_001641131.1	PFAM: glycosyl transferase group 1; KEGG: gox:GOX0595 putative glycosyltransferase
YP_001641132.1	KEGG: ana:alr4488 hypothetical protein
YP_001641133.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_3446 ISHne3, transposase
YP_001641134.1	KEGG: xcv:XCV4203 filamentous hemagglutinin-related protein
YP_001641135.1	KEGG: smd:Smed_6477 feruloyl esterase
YP_001641136.1	KEGG: rpb:RPB_2154 transposase IS116/IS110/IS902
YP_001641137.1	KEGG: rru:Rru_B0038 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_001641138.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ret:RHE_CH01514 dTDP-glucose-4,6-dehydratase protein
YP_001641139.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ccr:CC_1140 dTDP-4-dehydrorhamnose reductase
YP_001641140.1	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mmw:Mmwyl1_0838 glucose-1-phosphate thymidylyltransferase
YP_001641141.1	KEGG: sye:Syncc9902_0633 lipopolysaccharide biosynthesis protein-like
YP_001641142.1	KEGG: gbe:GbCGDNIH1_0062 hypothetical cytosolic protein
YP_001641143.1	KEGG: sfu:Sfum_3763 putative transposase
YP_001641144.1	KEGG: smd:Smed_6258 transposase and inactivated derivatives-like protein
YP_001641145.1	KEGG: ret:RHE_PA00059 probable insertion sequence transposase protein
YP_001641149.1	KEGG: bbt:BBta_1221 hypothetical protein
YP_001641150.1	KEGG: pla:Plav_0324 hypothetical protein
YP_001641152.1	PFAM: glycosyl transferase family 2; KEGG: rbe:RBE_0706 glycosyltransferase
YP_001641154.1	KEGG: chu:CHU_0859 acetyltransferase with hexapeptide repeat
YP_001641155.1	KEGG: nar:Saro_0724 glycosyl transferase, family 2
YP_001641156.1	PFAM: glycosyl transferase group 1; KEGG: fjo:Fjoh_0312 glycosyl transferase, group 1
YP_001641157.1	KEGG: rty:RT0327 possible glycosyltransferase
YP_001641158.1	TIGRFAM: methyltransferase FkbM family; KEGG: mag:amb2566 SAM-dependent methyltransferase
YP_001641159.1	PFAM: Glutathione S-transferase domain; KEGG: rru:Rru_A3271 glutathione S-transferase family protein
YP_001641160.1	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rpd:RPD_0747 dTDP-4-dehydrorhamnose reductase
YP_001641161.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; Polysaccharide biosynthesis domain protein; KEGG: har:HEAR1147 putative UDP-glucose 4-epimerase
YP_001641162.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: pmy:Pmen_1873 UDP-N-acetylglucosamine 2-epimerase
YP_001641163.1	KEGG: ccr:CC_0423 hypothetical protein
YP_001641164.1	KEGG: maq:Maqu_2649 fibronectin, type III domain protein
YP_001641166.1	catalyzes the hydrolysis of allophanate
YP_001641167.1	KEGG: xau:Xaut_1222 UreA carboxylase; TIGRFAM: urea amidolyase related protein; urea carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; SMART: Allophanate hydrolase subunit 1
YP_001641168.1	KEGG: ret:RHE_PE00119 hypothetical protein
YP_001641169.1	KEGG: xau:Xaut_1224 hypothetical protein
YP_001641170.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: bur:Bcep18194_C7526 protein of unknown function DUF861
YP_001641171.1	TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region; KEGG: dar:Daro_0077 glutamine synthetase, catalytic region
YP_001641172.1	PFAM: Creatininase; KEGG: dar:Daro_0078 creatininase
YP_001641173.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1387 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit
YP_001641174.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_5921 binding-protein-dependent transport systems inner membrane component
YP_001641175.1	KEGG: mfa:Mfla_1859 ABC transport system substrate-binding protein
YP_001641176.1	KEGG: aeh:Mlg_0732 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase
YP_001641177.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aeh:Mlg_0733 binding-protein-dependent transport systems inner membrane component
YP_001641178.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: csa:Csal_3102 substrate-binding region of ABC-type glycine betaine transport system
YP_001641179.1	KEGG: acb:A1S_1441 putative signal peptide
YP_001641180.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: rsh:Rsph17029_1567 transcriptional regulator, AraC family
YP_001641181.1	TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: xau:Xaut_0869 sarcosine oxidase, beta subunit family
YP_001641182.1	TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: xau:Xaut_0868 sarcosine oxidase, delta subunit family
YP_001641183.1	TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: xau:Xaut_0867 sarcosine oxidase, alpha subunit family
YP_001641184.1	PFAM: Sarcosine oxidase gamma subunit; KEGG: xau:Xaut_0866 sarcosine oxidase gamma subunit
YP_001641185.1	KEGG: xau:Xaut_0871 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain
YP_001641187.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: xau:Xaut_0317 YbaK/prolyl-tRNA synthetase associated region
YP_001641188.1	KEGG: acr:Acry_0997 electron transfer flavoprotein beta-subunit
YP_001641189.1	PFAM: Electron transfer flavoprotein alpha subunit; KEGG: gbe:GbCGDNIH1_0071 electron transfer flavoprotein alpha-subunit
YP_001641190.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gbe:GbCGDNIH1_0072 fumarate reductase iron-sulfur protein
YP_001641191.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gbe:GbCGDNIH1_0073 NADH-dependent flavin oxidoreductase
YP_001641192.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: gbe:GbCGDNIH1_0075 ring hydroxylating dioxygenase oxidoreductase subunit
YP_001641193.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: gbe:GbCGDNIH1_0076 ring hydroxylating dioxygenase, alpha-subunit
YP_001641194.1	TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: bbt:BBta_2598 putative inositol monophosphatase family protein
YP_001641195.1	PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: bbt:BBta_2597 putative ethanolamine kinase
YP_001641196.1	PFAM: aminoglycoside phosphotransferase; KEGG: bbt:BBta_2596 hypothetical protein
YP_001641197.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
YP_001641198.1	KEGG: bbt:BBta_2593 putative ABC transporter, ATP binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001641199.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_2592 putative ABC transporter, permease protein
YP_001641200.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_2591 putative ABC transporter, permease protein
YP_001641201.1	PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_2590 putative ABC transporter, substrate-binding protein
YP_001641202.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: rpb:RPB_4403 TonB-dependent siderophore receptor
YP_001641203.1	PFAM: FecR protein; KEGG: rpa:RPA3281 probable FecR, iron siderophore sensor protein
YP_001641204.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: xau:Xaut_2777 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001641205.1	PFAM: IucA/IucC family protein; KEGG: nwi:Nwi_2302 siderophore synthetase component
YP_001641206.1	PFAM: AMP-dependent synthetase and ligase; IucA/IucC family protein; KEGG: rpa:RPA2389 possible rhizobactin siderophore biosynthesis protein RhsF
YP_001641207.1	KEGG: rpb:RPB_4395 hypothetical protein
YP_001641208.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rpa:RPA2386 hypothetical protein
YP_001641209.1	KEGG: nwi:Nwi_2293 hypothetical protein
YP_001641210.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpb:RPB_4402 GCN5-related N-acetyltransferase
YP_001641211.1	KEGG: smd:Smed_6350 hypothetical protein
YP_001641213.1	KEGG: xau:Xaut_2539 putative transcriptional regulator, TetR family
YP_001641214.1	KEGG: bbt:BBta_1743 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent
YP_001641215.1	PFAM: Protein of unknown function DUF1790; KEGG: xau:Xaut_2546 protein of unknown function DUF1790
YP_001641216.1	PFAM: protein of unknown function DUF526; KEGG: rpc:RPC_1414 protein of unknown function DUF526
YP_001641217.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bbt:BBta_6216 putative two component response transcriptional regulator (OmpR family)
YP_001641218.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpc:RPC_4653 periplasmic sensor signal transduction histidine kinase
YP_001641219.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: psp:PSPPH_0905 GGDEF domain protein
YP_001641220.1	KEGG: rle:pRL110461 putative glutathione-S-transferase protein
YP_001641221.1	TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: xau:Xaut_2136 polyhydroxyalkanoate depolymerase, intracellular
YP_001641222.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_001641223.1	PFAM: response regulator receiver; KEGG: bra:BRADO1367 putative two-component response regulator
YP_001641224.1	PFAM: glutamine amidotransferase class-II; KEGG: bra:BRADO0859 putative glutamine amidotransferase, class-II
YP_001641225.1	PFAM: protein of unknown function DUF81; KEGG: ccr:CC_0372 hypothetical protein
YP_001641226.1	PFAM: MaoC domain protein dehydratase; KEGG: xau:Xaut_1970 MaoC domain protein dehydratase
YP_001641227.1	PFAM: protein of unknown function YGGT; KEGG: rpa:RPA0415 family of unknown function YGGT
YP_001641228.1	PFAM: integrase family protein; KEGG: bja:bll0870 probable site-specific integrase/recombinase
YP_001641230.1	KEGG: lma:LmjF34.0690 hypothetical protein, conserved
YP_001641232.1	PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator
YP_001641233.1	PFAM: Resolvase domain; KEGG: rpb:RPB_0923 resolvase-like
YP_001641234.1	KEGG: bsu:BG13632 hypothetical protein
YP_001641235.1	PFAM: transposase IS4 family protein; KEGG: acr:Acry_3208 transposase, IS4 family protein
YP_001641236.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr2833 short chain dehydrogenase
YP_001641238.1	PFAM: regulatory protein MarR; KEGG: mxa:MXAN_3240 transcriptional regulator, MarR family
YP_001641239.1	PFAM: DoxX family protein; KEGG: jan:Jann_0759 hypothetical protein
YP_001641240.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: pol:Bpro_3542 MATE efflux family protein
YP_001641242.1	PFAM: regulatory protein TetR; KEGG: reh:H16_B1139 transcriptional regulator
YP_001641243.1	PFAM: acriflavin resistance protein; KEGG: mms:mma_1025 cation efflux system protein
YP_001641244.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mms:mma_1024 component of multidrug efflux system
YP_001641245.1	KEGG: bbt:BBta_p0203 hypothetical protein
YP_001641246.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:pRL100447 putative LysR family transcriptional regulator
YP_001641247.1	PFAM: aldo/keto reductase; KEGG: rle:pRL100446 putative aldo-keto reductase
YP_001641248.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-3 domain protein; KEGG: rpd:RPD_0066 GGDEF domain
YP_001641249.1	PFAM: EAL domain protein; GAF domain protein; KEGG: aav:Aave_3096 diguanylate phosphodiesterase with GAF sensor
YP_001641251.1	PFAM: regulatory protein LysR; KEGG: bvi:Bcep1808_0955 transcriptional regulator of molybdate metabolism, LysR family
YP_001641252.1	KEGG: bra:BRADO0251 hypothetical protein
YP_001641253.1	KEGG: bja:blr0530 hypothetical protein
YP_001641255.1	KEGG: smd:Smed_1425 hypothetical protein
YP_001641256.1	KEGG: xau:Xaut_2147 hypothetical protein
YP_001641257.1	PFAM: protein of unknown function UPF0118; KEGG: gbe:GbCGDNIH1_2397 hypothetical membrane spanning protein
YP_001641258.1	KEGG: pap:PSPA7_0636 transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001641259.1	PFAM: Transglycosylase-associated protein; KEGG: bov:BOV_0440 putative transglycosylase-associated protein
YP_001641260.1	KEGG: smd:Smed_5683 conserved hypothetical membrane spanning protein
YP_001641261.1	KEGG: sus:Acid_7531 hypothetical protein
YP_001641262.1	KEGG: sus:Acid_7532 hypothetical protein
YP_001641263.1	KEGG: bja:bll4998 hypothetical protein
YP_001641264.1	TIGRFAM: esterase, PHB depolymerase family; KEGG: xau:Xaut_3344 esterase, PHB depolymerase family
YP_001641265.1	PFAM: Choloylglycine hydrolase; KEGG: rpb:RPB_3497 choloylglycine hydrolase
YP_001641266.1	PFAM: alpha/beta hydrolase fold; KEGG: rxy:Rxyl_2437 alpha/beta hydrolase fold
YP_001641267.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: acr:Acry_1099 transcriptional regulator, LysR family
YP_001641268.1	PFAM: protein of unknown function DUF1275; KEGG: rso:RSc0238 putative permease transmembrane protein
YP_001641269.1	PFAM: helix-turn-helix domain protein; GAF domain protein; KEGG: tel:tll1282 two-component hybrid sensor and regulator
YP_001641270.1	KEGG: rpe:RPE_4154 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001641271.1	KEGG: xau:Xaut_3516 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein
YP_001641272.1	inactive form
YP_001641273.1	PFAM: Chloride channel core; KEGG: xau:Xaut_2460 chloride channel core
YP_001641274.1	KEGG: bja:blr7330 AcrB/AcrD/AcrF family protein
YP_001641275.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:blr7329 putative multidrug resistance protein
YP_001641276.1	TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: nha:Nham_4073 cytochrome d ubiquinol oxidase, subunit II
YP_001641277.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: nha:Nham_4072 cytochrome bd ubiquinol oxidase, subunit I
YP_001641278.1	PFAM: protein of unknown function DUF81; KEGG: acr:Acry_3050 protein of unknown function DUF81
YP_001641279.1	PFAM: regulatory protein ArsR; KEGG: rru:Rru_A1717 transcriptional regulator, ArsR family
YP_001641280.1	PFAM: beta-lactamase domain protein; KEGG: pde:Pden_4706 beta-lactamase domain protein
YP_001641281.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rpc:RPC_1920 peroxidase
YP_001641282.1	PFAM: protein of unknown function DUF442; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: reu:Reut_B3588 protein of unknown function DUF442
YP_001641283.1	KEGG: stp:Strop_1906 tetratricopeptide TPR_4
YP_001641284.1	PFAM: alpha/beta hydrolase fold; KEGG: sru:SRU_0288 hydrolase, alpha/beta fold family, putative
YP_001641285.1	PFAM: periplasmic binding protein; KEGG: rpc:RPC_1985 periplasmic binding protein
YP_001641286.1	PFAM: transport system permease protein; ABC-3 protein; KEGG: pde:Pden_0865 transport system permease protein
YP_001641287.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_1423 ABC transporter related
YP_001641288.1	PFAM: oxidoreductase molybdopterin binding; KEGG: rle:RL3017 putative exported molybdopterin cofactor-containing protein
YP_001641289.1	KEGG: aba:Acid345_3942 hypothetical protein
YP_001641290.1	PFAM: NodS family protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpb:RPB_4100 NodS
YP_001641291.1	PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: rpb:RPB_4098 acyl-CoA dehydrogenase
YP_001641295.1	PFAM: aldo/keto reductase; KEGG: pcu:pc0543 probable oxidoreductase MocA family
YP_001641297.1	PFAM: isochorismatase hydrolase; KEGG: mva:Mvan_4420 isochorismatase hydrolase
YP_001641298.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:bll0300 RagD protein
YP_001641299.1	PFAM: acriflavin resistance protein; KEGG: bja:bll0301 cation efflux protein
YP_001641300.1	KEGG: sus:Acid_6814 hypothetical protein
YP_001641301.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mfa:Mfla_2111 NADP oxidoreductase, coenzyme F420-dependent
YP_001641302.1	PFAM: aldo/keto reductase; KEGG: pmy:Pmen_0376 aldo/keto reductase
YP_001641303.1	TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein; KEGG: rpe:RPE_0929 putative methyltransferase
YP_001641304.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: xau:Xaut_3094 RNA-binding S4 domain protein
YP_001641305.1	PFAM: protein of unknown function DUF1328; KEGG: rpb:RPB_2024 protein of unknown function DUF1328
YP_001641306.1	TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: har:HEAR1959 NADPH-dependent FMN reductase
YP_001641307.1	PFAM: regulatory protein ArsR; KEGG: xau:Xaut_0874 regulatory protein ArsR
YP_001641308.1	TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: mes:Meso_0324 arsenate reductase
YP_001641309.1	TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: nwi:Nwi_3126 arsenite efflux pump ACR3
YP_001641310.1	KEGG: bja:bll0955 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001641311.1	PFAM: alpha/beta hydrolase fold; KEGG: rpa:RPA1163 possible epoxide hydrolase
YP_001641312.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr7900 putative nodulation protein
YP_001641313.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mes:Meso_0427 CMP/dCMP deaminase, zinc-binding
YP_001641314.1	KEGG: mlo:mlr7447 phosphoribosylamine-glycine ligase; TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase
YP_001641315.1	KEGG: gvi:gll1539 unknown protein
YP_001641316.1	KEGG: xau:Xaut_1413 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type
YP_001641317.1	KEGG: ret:RHE_CH00843 hypothetical protein
YP_001641318.1	KEGG: xau:Xaut_2553 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase
YP_001641319.1	PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: rpc:RPC_1206 GreA/GreB family elongation factor
YP_001641320.1	TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bra:BRADO2038 putative dehydrogenase, NAD(P)-binding domain and GroES-like domain
YP_001641321.1	KEGG: mlo:mll8471 hypothetical protein
YP_001641322.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bja:bll0157 ferredoxin
YP_001641323.1	PFAM: transcription factor CarD; KEGG: oan:Oant_1134 transcriptional regulator, CarD family
YP_001641324.1	binds with the catalytic core of RNA polymerase to produce the holoenzyme; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma-32 is responsible for the expression of heat shock promoters; there are paralogs in Rhizobium and Sinorhizobium; the proteins in this cluster act as secondary heat shock sigma factors; the Rhizobium sigma-32 factor may also be involved in exopolysaccharide production
YP_001641325.1	KEGG: bja:blr8004 probable site-specific integrase/recombinase
YP_001641326.1	KEGG: pfl:PFL_5107 UDP-N-acetylglucosamine 2-epimerase
YP_001641327.1	TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine
YP_001641328.1	PFAM: Hemolysin-type calcium-binding region; KEGG: rsh:Rsph17029_4185 Na-Ca exchanger/integrin-beta4
YP_001641329.1	SMART: PDZ/DHR/GLGF domain protein; KEGG: bbt:BBta_1107 putative serine protease
YP_001641330.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rpb:RPB_3909 sigma-24 (FecI-like)
YP_001641331.1	KEGG: acr:Acry_1332 uncharacterized protein-like protein
YP_001641332.1	KEGG: xau:Xaut_4179 hypothetical protein
YP_001641333.1	TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: xau:Xaut_4315 excinuclease ABC, A subunit
YP_001641334.1	KEGG: bra:BRADO3576 conserved hypothetical protein; putative methyl-accepting chemotaxis protein
YP_001641335.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Nitrate and nitrite sensing domain protein; KEGG: mag:amb3383 methyl-accepting chemotaxis protein
YP_001641336.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mlo:mll7356 multidrug efflux membrane fusion protein MexE
YP_001641337.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: nha:Nham_0712 hydrophobe/amphiphile efflux-1 HAE1
YP_001641338.1	KEGG: rpd:RPD_3796 response regulator receiver
YP_001641339.1	KEGG: swi:Swit_5219 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001641340.1	SMART: regulatory protein Crp; KEGG: nha:Nham_0645 putative transcriptional regulator, Crp/Fnr family
YP_001641341.1	PFAM: glycoside hydrolase family 25; KEGG: rsp:RSP_3565 glycoside hydrolase, family 25
YP_001641342.1	PFAM: protein of unknown function DUF1130; KEGG: rle:pRL80098 hypothetical protein
YP_001641343.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: bja:blr4586 2-octaprenyl-6-methoxyphenyl hydroxylase
YP_001641345.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: xau:Xaut_3872 alcohol dehydrogenase zinc-binding domain protein
YP_001641346.1	PFAM: isochorismatase hydrolase; KEGG: rme:Rmet_1854 isochorismatase hydrolase
YP_001641347.1	PFAM: aminotransferase class IV; KEGG: zmo:ZMO0115 branched-chain amino acid aminotransferase
YP_001641348.1	TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: zmo:ZMO0114 anthranilate synthase component II
YP_001641349.1	TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: bja:bll2092 para-aminobenzoate synthetase component I
YP_001641350.1	TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: xft:PD1099 DNA-damage-inducible protein
YP_001641351.1	TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: ajs:Ajs_4296 addiction module toxin, RelE/StbE family
YP_001641352.1	catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit
YP_001641354.1	KEGG: rpe:RPE_2057 membrane protein-like protein
YP_001641355.1	TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: xau:Xaut_4391 MazG family protein
YP_001641356.1	PFAM: plasmid encoded RepA protein; KEGG: xac:XACb0056 replication protein A
YP_001641357.1	KEGG: mmu:100042292 similar to CG10953-PA
YP_001641358.1	PFAM: Patatin; KEGG: rpd:RPD_2041 patatin
YP_001641359.1	PFAM: HpcH/HpaI aldolase; KEGG: xau:Xaut_3870 HpcH/HpaI aldolase
YP_001641360.1	TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: oan:Oant_3636 hemimethylated DNA binding protein
YP_001641361.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pfo:Pfl_2170 putative diguanylate cyclase (GGDEF domain)
YP_001641363.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xau:Xaut_1149 efflux transporter, RND family, MFP subunit
YP_001641364.1	PFAM: acriflavin resistance protein; KEGG: xau:Xaut_1148 acriflavin resistance protein
YP_001641365.1	KEGG: rpd:RPD_3546 uncharacterized domain HDIG; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region
YP_001641366.1	TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: pfl:PFL_0325 agmatinase, putative
YP_001641367.1	KEGG: rca:Rcas_1415 methicillin resistance protein
YP_001641368.1	KEGG: sme:SMc01445 hypothetical protein
YP_001641369.1	KEGG: rsh:Rsph17029_2252 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein
YP_001641370.1	TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: bja:bll0760 ubiquinone biosynthesis protein
YP_001641371.1	TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_0378 ubiquinone/menaquinone biosynthesis methyltransferases
YP_001641372.1	KEGG: gbe:GbCGDNIH1_1342 dihydrofolate reductase
YP_001641373.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nha:Nham_1687 short-chain dehydrogenase/reductase SDR
YP_001641374.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
YP_001641375.1	PFAM: Colicin V production protein; KEGG: bov:BOV_0454 putative colicin V production protein
YP_001641376.1	PFAM: beta-lactamase domain protein; KEGG: bbt:BBta_5036 putative metallo-hydrolase/oxidoreductase
YP_001641377.1	PFAM: electron transport protein SCO1/SenC; KEGG: pla:Plav_0014 classical-complement-pathway C3/C5 convertase
YP_001641378.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_001641379.1	KEGG: rpe:RPE_3334 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein
YP_001641380.1	TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: rpa:RPA3084 replicative DNA helicase (dnaB)
YP_001641381.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_001641382.1	KEGG: rpc:RPC_2294 hypothetical protein
YP_001641383.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_001641384.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_001641385.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sal:Sala_0626 gentamicin 3'-N-acetyltransferase
YP_001641386.1	PFAM: protein of unknown function DUF1696; KEGG: mes:Meso_1246 protein of unknown function DUF1696
YP_001641388.1	KEGG: gbe:GbCGDNIH1_0305 hypothetical protein
YP_001641389.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rle:RL0451 putative cold shock protein
YP_001641391.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_001641393.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bbt:BBta_2266 putative outer membrane hemin/siderophore receptor protein
YP_001641394.1	KEGG: rpb:RPB_2180 hypothetical protein
YP_001641395.1	KEGG: bra:BRADO2748 hypothetical protein
YP_001641396.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sus:Acid_2411 GCN5-related N-acetyltransferase
YP_001641397.1	PFAM: Citrate transporter; KEGG: xau:Xaut_4755 citrate transporter
YP_001641398.1	involved in the transport of C4-dicarboxylates across the membrane
YP_001641399.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: gox:GOX0911 putative oxidoreductase
YP_001641400.1	PFAM: fumarate lyase; KEGG: hch:HCH_01841 aspartate ammonia-lyase
YP_001641401.1	KEGG: nwi:Nwi_0904 hypothetical protein
YP_001641402.1	PFAM: porin; KEGG: xau:Xaut_2286 porin
YP_001641403.1	PFAM: extracellular solute-binding protein family 3; KEGG: rru:Rru_A2087 extracellular solute-binding protein, family 3
YP_001641404.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A2088 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
YP_001641405.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_4372 polar amino acid ABC transporter, inner membrane subunit
YP_001641406.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psb:Psyr_3911 ABC transporter
YP_001641407.1	PFAM: protein of unknown function DUF606; KEGG: gbe:GbCGDNIH1_1401 hypothetical membrane spanning protein
YP_001641408.1	PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: bja:blr5272 arsenical pump membrane protein
YP_001641409.1	KEGG: ddi:DDB_0185120 hypothetical protein
YP_001641410.1	PFAM: Propeptide PepSY amd peptidase M4
YP_001641411.1	PFAM: NUDIX hydrolase; KEGG: rca:Rcas_0387 NUDIX hydrolase
YP_001641412.1	PFAM: band 7 protein; KEGG: kra:Krad_4132 band 7 protein
YP_001641413.1	KEGG: fal:FRAAL0513 hypothetical protein
YP_001641414.1	TIGRFAM: amino acid adenylation domain protein; non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; transferase hexapeptide repeat containing protein; KEGG: mag:amb1359 hypothetical protein
YP_001641415.1	PFAM: protein of unknown function DUF891; KEGG: mmw:Mmwyl1_0353 protein of unknown function DUF891
YP_001641416.1	KEGG: sus:Acid_0970 transcriptional regulator, fis family
YP_001641417.1	KEGG: xau:Xaut_4471 conserved hypothetical protein; putative alpha/beta hydrolase domain
YP_001641418.1	PFAM: aminotransferase class V; KEGG: bra:BRADO3539 cysteine desulfurase (nitrogenase metalloclusters biosynthesis protein NifS)
YP_001641419.1	TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: rpa:RPA2464 SufB, needed for FhuF Fe-S center stability
YP_001641420.1	KEGG: rpb:RPB_2992 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001641421.1	TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: xau:Xaut_4467 FeS assembly protein SufD
YP_001641422.1	TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bra:BRADO3544 cysteine desulfurase
YP_001641423.1	TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59; KEGG: mlo:mlr0023 hypothetical protein
YP_001641424.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; FeS assembly scaffold SufA; PFAM: HesB/YadR/YfhF-family protein; KEGG: rpb:RPB_2988 HesB/YadR/YfhF
YP_001641425.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_2834 diguanylate cyclase (GGDEF domain)
YP_001641426.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: xau:Xaut_4759 DEAD/DEAH box helicase domain protein
YP_001641428.1	PFAM: porin; KEGG: xau:Xaut_2467 porin
YP_001641429.1	KEGG: bbt:BBta_7106 hypothetical protein
YP_001641430.1	KEGG: bra:BRADO3284 hypothetical protein; putative signal peptide
YP_001641431.1	KEGG: pst:PSPTO_3129 hypothetical protein
YP_001641433.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: afw:Anae109_0220 HAD-superfamily hydrolase, subfamily IA, variant 3
YP_001641435.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO0399 putative ABC transporter, ATP-binding protein
YP_001641436.1	PFAM: lipolytic protein G-D-S-L family; KEGG: rpe:RPE_0303 lipolytic enzyme, G-D-S-L family
YP_001641437.1	TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: rpa:RPA0194 2'_5' RNA ligase
YP_001641438.1	TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: bja:bsl5417 preprotein translocase
YP_001641439.1	TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: sme:SMc01322 probable transcription antitermination protein
YP_001641440.1	binds directly to 23S ribosomal RNA
YP_001641441.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_001641442.1	PFAM: cytochrome P450; KEGG: mxa:MXAN_4127 cytochrome P450 family protein
YP_001641443.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mba:Mbar_A1946 putative ferredoxin reductase
YP_001641444.1	KEGG: rha:RHA1_ro02508 ferredoxin protein
YP_001641445.1	PFAM: acyltransferase 3; KEGG: mxa:MXAN_1041 acyltransferase family protein
YP_001641446.1	PFAM: glycosyl transferase family 2; KEGG: pla:Plav_3344 glycosyl transferase family 2
YP_001641447.1	TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: rpa:RPA3043 aspartyl-tRNA synthetase
YP_001641448.1	KEGG: syf:Synpcc7942_0419 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB
YP_001641450.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pol:Bpro_3959 5-carboxymethyl-2-hydroxymuconate delta-isomerase
YP_001641451.1	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: xau:Xaut_4441 membrane protein involved in aromatic hydrocarbon degradation
YP_001641452.1	PFAM: Prephenate dehydrogenase; KEGG: oan:Oant_3943 prephenate dehydrogenase
YP_001641453.1	KEGG: ccr:CC_0091 sensory box/GGDEF family protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001641454.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bbt:BBta_2962 hypothetical protein
YP_001641455.1	PFAM: phosphate-selective porin O and P; KEGG: nar:Saro_2588 phosphate-selective porin O and P
YP_001641456.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_001641457.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_001641458.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_001641459.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
YP_001641460.1	PFAM: extracellular solute-binding protein family 1; KEGG: bbt:BBta_3516 putrescine ABC transporter, periplasmic binding protein
YP_001641461.1	PFAM: Endoribonuclease L-PSP; KEGG: bja:bll1127 hypothetical protein
YP_001641462.1	PFAM: Transglycosylase-associated protein; KEGG: rpc:RPC_2982 transglycosylase-associated protein
YP_001641463.1	PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: yen:YE1738 hypothetical protein
YP_001641464.1	PFAM: helix-turn-helix HxlR type; KEGG: rpb:RPB_2619 putative transcriptional regulator
YP_001641466.1	PFAM: Glutathione S-transferase domain; KEGG: sal:Sala_2778 glutathione S-transferase-like protein
YP_001641467.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_3292 TonB-dependent siderophore receptor
YP_001641468.1	KEGG: rpa:RPA0432 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein
YP_001641469.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_001641470.1	PFAM: amino acid permease-associated region; KEGG: gvi:gll1666 probable amino acid transporter
YP_001641471.1	TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: nha:Nham_0092 exodeoxyribonuclease III (xth)
YP_001641472.1	PFAM: BLUF domain protein; KEGG: rpa:RPA0522 possible activator of photopigment and puc with BLUF domain
YP_001641473.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: bja:bll5864 hypothetical protein
YP_001641474.1	PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: xau:Xaut_1840 outer membrane lipoprotein carrier protein LolA
YP_001641475.1	PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: smd:Smed_4194 cell divisionFtsK/SpoIIIE
YP_001641476.1	catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
YP_001641477.1	LovR from Caulobacter crescentus is a response regulator part of a two-component signaling system that regulates photosensitive bacterial cell-surface and cell-cell attachment
YP_001641478.1	KEGG: ccr:CC_0285 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001641479.1	PFAM: major facilitator superfamily MFS_1; KEGG: pla:Plav_3596 major facilitator superfamily MFS_1
YP_001641480.1	KEGG: eba:ebA2553 hypothetical protein
YP_001641481.1	KEGG: jan:Jann_3601 hypothetical protein
YP_001641482.1	PFAM: NnrUfamily protein; KEGG: rpb:RPB_2444 NnrU
YP_001641483.1	KEGG: bbt:BBta_3774 hypothetical protein
YP_001641484.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_001641485.1	PFAM: protein of unknown function DUF81; KEGG: pap:PSPA7_5761 hypothetical protein
YP_001641486.1	PFAM: glutamate--cysteine ligase GCS2; KEGG: xau:Xaut_4105 glutamate--cysteine ligase GCS2
YP_001641487.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
YP_001641489.1	PFAM: protein of unknown function UPF0074; KEGG: pla:Plav_0970 transcriptional regulator, BadM/Rrf2 family
YP_001641490.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: oan:Oant_3585 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001641491.1	PFAM: beta-lactamase; KEGG: mlo:mll2003 hypothetical protein
YP_001641492.1	KEGG: rpa:RPA0981 sensor histidine kinase with multiple PAS and a response regulator receiver domain; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001641493.1	KEGG: pol:Bpro_3007 glutathione S-transferase-like
YP_001641494.1	PFAM: protein of unknown function DUF937; KEGG: reh:H16_A3150 hypothetical protein
YP_001641496.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_001641497.1	PFAM: PilT protein domain protein; KEGG: hha:Hhal_0789 PilT protein domain protein
YP_001641498.1	PFAM: LysR substrate-binding; KEGG: bbt:BBta_6129 putative transcriptional regulatory protein, LysR family
YP_001641499.1	KEGG: gox:GOX2137 transcriptional regulator
YP_001641500.1	PFAM: DoxX family protein; KEGG: bbt:BBta_6128 putative membrane protein of unknown function with DoxD-like family protein domain
YP_001641501.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpb:RPB_4677 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001641502.1	KEGG: bja:blr0850 hypothetical protein
YP_001641503.1	KEGG: bja:blr0851 hypothetical protein
YP_001641504.1	catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate
YP_001641505.1	KEGG: rpd:RPD_0062 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001641506.1	PFAM: Ankyrin; KEGG: ppf:Pput_3876 ankyrin
YP_001641507.1	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: oan:Oant_1086 glycerol kinase
YP_001641508.1	PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_4720 alpha/beta hydrolase fold
YP_001641509.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bra:BRADO6566 putative methyl-accepting chemotaxis protein
YP_001641510.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: nha:Nham_2449 glycerophosphoryl diester phosphodiesterase
YP_001641511.1	PFAM: Endoribonuclease L-PSP; KEGG: bja:blr5132 hypothetical protein
YP_001641512.1	PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: oan:Oant_2167 ABC transporter related
YP_001641513.1	KEGG: oan:Oant_2166 secretion protein HlyD family protein
YP_001641515.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mlo:mlr1270 probable transcriptional regulator
YP_001641516.1	TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mlo:mlr5646 acetylornithine aminotransferase
YP_001641517.1	TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: nwi:Nwi_0514 ornithine carbamoyltransferase
YP_001641518.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: pol:Bpro_4120 hypothetical protein
YP_001641519.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: rle:RL4704 putative glyoxalase family protein
YP_001641520.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xac:XAC2129 3-ketoacyl-acyl carrier protein reductase
YP_001641521.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: cvi:CV_2037 dihydrolipoamide dehydrogenase
YP_001641522.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; Phytochrome central region domain protein; PAS fold-2 domain protein; PAS fold domain protein; KEGG: ava:Ava_1003 multi-sensor signal transduction histidine kinase
YP_001641523.1	PFAM: Haem oxygenase; KEGG: pen:PSEEN1837 heme oxygenase BphO
YP_001641524.1	KEGG: acr:Acry_0122 hypothetical protein
YP_001641525.1	KEGG: nha:Nham_2927 hypothetical protein
YP_001641526.1	KEGG: xau:Xaut_3812 capsule polysaccharide export protein-like protein
YP_001641528.1	KEGG: bja:blr3114 hypothetical protein
YP_001641529.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rpa:RPA1268 two-component flagellar transcriptional activator FlbD, fis-type
YP_001641530.1	TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bra:BRADO5902 flagellar motor switch protein
YP_001641531.1	binds to and inhibits the function of flagella specific ATPase FliI
YP_001641532.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_001641533.1	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_001641534.1	PFAM: protein of unknown function DUF1153; KEGG: bov:BOV_1536 hypothetical protein
YP_001641535.1	PFAM: flagellar hook capping protein; KEGG: bbt:BBta_1878 putative flagellar basal-body rod modification protein FlgD
YP_001641536.1	PFAM: flagellar hook-length control protein; KEGG: rpa:RPA1305 possible flagellar hook length determination protein
YP_001641537.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_001641538.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: xau:Xaut_0403 phosphatidylethanolamine N-methyltransferase
YP_001641539.1	PFAM: SNARE associated Golgi protein; KEGG: pla:Plav_0303 SNARE associated Golgi protein
YP_001641540.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: nha:Nham_3706 histidine kinase
YP_001641541.1	PFAM: carbonic anhydrase; KEGG: pst:PSPTO_1340 carbonic anhydrase
YP_001641542.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_1513 drug resistance transporter, EmrB/QacA subfamily
YP_001641543.1	PFAM: secretion protein HlyD family protein; KEGG: xau:Xaut_1512 secretion protein HlyD family protein
YP_001641544.1	PFAM: regulatory protein TetR; KEGG: xau:Xaut_1511 transcriptional regulator, TetR family
YP_001641545.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: nwi:Nwi_0637 acyl-CoA dehydrogenase
YP_001641546.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: rpd:RPD_1247 SUA5/YciO/YrdC/YwlC
YP_001641548.1	KEGG: rpc:RPC_0560 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001641549.1	PFAM: KaiB domain protein; KEGG: rsp:RSP_3983 circadian clock KaiB-like protein
YP_001641550.1	PFAM: KaiB domain protein; KEGG: mma:MM_1091 thiol-disulfide isomerase
YP_001641551.1	acts as a promotor non-specific transcription repressor
YP_001641553.1	PFAM: response regulator receiver; KEGG: rpa:RPA1481 response regulator receiver (CheY-like protein)
YP_001641554.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rpa:RPA4816 two component sensor histidine kinase
YP_001641555.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mlo:mlr6617 two-component system, regulatory protein
YP_001641556.1	KEGG: mlo:mlr6616 hypothetical protein
YP_001641557.1	PFAM: nuclease (SNase domain protein); KEGG: xac:XAC3258 succinoglycan biosynthesis protein
YP_001641559.1	KEGG: bbr:BB3603 putative iron uptake protein
YP_001641560.1	PFAM: PepSY-associated TM helix domain protein; KEGG: reh:H16_B0118 uncharacterized iron-regulated membrane protein
YP_001641561.1	KEGG: reh:H16_B0117 putative iron uptake protein
YP_001641562.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bpa:BPP3206 putative ferric siderophore receptor
YP_001641564.1	KEGG: par:Psyc_1601 hypothetical protein
YP_001641565.1	PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: bbt:BBta_7350 putative phosphomannomutase/phosphoglucomutase (PMM / PGM)
YP_001641566.1	PFAM: Hemolysin-type calcium-binding region; KEGG: rpe:RPE_3513 hemolysin-type calcium-binding region
YP_001641567.1	PFAM: Hemolysin-type calcium-binding region; KEGG: rpe:RPE_3513 hemolysin-type calcium-binding region
YP_001641569.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: ccr:CC_0164 hypothetical protein
YP_001641570.1	KEGG: rpe:RPE_3504 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase
YP_001641571.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: rpe:RPE_3503 NAD-dependent epimerase/dehydratase
YP_001641572.1	KEGG: rpe:RPE_3494 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF
YP_001641573.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: aeh:Mlg_2802 NAD-dependent epimerase/dehydratase
YP_001641574.1	PFAM: polysaccharide export protein; KEGG: rpe:RPE_3496 polysaccharide export protein
YP_001641575.1	KEGG: rpe:RPE_3497 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein
YP_001641577.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rpc:RPC_1904 two component transcriptional regulator, LuxR family
YP_001641578.1	KEGG: rpc:RPC_1906 hypothetical protein
YP_001641579.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein; KEGG: xau:Xaut_0031 40-residue YVTN family beta-propeller repeat protein
YP_001641580.1	KEGG: rpc:RPC_1917 MxaD protein, putative
YP_001641581.1	SMART: von Willebrand factor type A; KEGG: rpc:RPC_1916 von Willebrand factor, type A
YP_001641582.1	KEGG: rpe:RPE_3131 hypothetical protein
YP_001641583.1	PFAM: von Willebrand factor type A; KEGG: rpc:RPC_1914 von Willebrand factor, type A
YP_001641584.1	KEGG: rpc:RPC_1913 MxaA protein, putative
YP_001641585.1	KEGG: rpc:RPC_1912 hypothetical protein
YP_001641586.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rpc:RPC_1911 ATPase associated with various cellular activities, AAA_3
YP_001641587.1	PFAM: methanol dehydrogenase beta subunit; KEGG: mca:MCA0782 methanol dehydrogenase, small subunit
YP_001641588.1	PFAM: cytochrome c class I; KEGG: pde:Pden_2995 cytochrome c, class I
YP_001641589.1	SMART: extracellular solute-binding protein family 3; KEGG: gbe:GbCGDNIH1_0345 MoxJ protein precursor
YP_001641590.1	TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: rpc:RPC_1907 pyrrolo-quinoline quinone
YP_001641592.1	KEGG: rsh:Rsph17029_2577 hypothetical protein
YP_001641593.1	KEGG: rpb:RPB_2922 hypothetical protein
YP_001641594.1	PFAM: beta-lactamase domain protein; KEGG: smd:Smed_3996 beta-lactamase domain protein
YP_001641595.1	KEGG: smd:Smed_3995 hypothetical protein
YP_001641596.1	TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: xau:Xaut_4419 nucleotidyl transferase
YP_001641597.1	TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: rpd:RPD_2618 glucosamine--fructose-6-phosphate aminotransferase, isomerizing
YP_001641598.1	PFAM: protein of unknown function DUF336; KEGG: mfa:Mfla_1444 protein of unknown function DUF336
YP_001641599.1	PFAM: protein of unknown function DUF502; KEGG: rpb:RPB_2853 protein of unknown function DUF502
YP_001641601.1	catalyzes branch migration in Holliday junction intermediates
YP_001641602.1	PFAM: protein of unknown function DUF339; KEGG: smd:Smed_1400 protein of unknown function DUF339
YP_001641603.1	KEGG: xau:Xaut_4262 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_001641604.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ret:RHE_PF00130 putative cold shock protein
YP_001641605.1	KEGG: mes:Meso_3295 hypothetical protein
YP_001641608.1	KEGG: rpb:RPB_2848 acid-CoA ligase
YP_001641609.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bra:BRADO1892 putative sensor histidine kinase with a response regulator receiver domain
YP_001641610.1	PFAM: response regulator receiver; KEGG: bja:blr5906 two-component hybrid sensor and regulator
YP_001641611.1	PFAM: AMP-dependent synthetase and ligase; KEGG: xau:Xaut_2463 AMP-dependent synthetase and ligase
YP_001641613.1	PFAM: glycosyl transferase family 39; KEGG: xau:Xaut_4551 glycosyl transferase family 39
YP_001641614.1	PFAM: glycosyl transferase family 2; KEGG: rpa:RPA2557 glycosyl transferase, family 2
YP_001641615.1	PFAM: lipid A biosynthesis domain protein; KEGG: bbt:BBta_3920 putative membrane protein of unknown function with lipid A disaccharide synthase (N-term)
YP_001641616.1	KEGG: gox:GOX0918 hypothetical protein
YP_001641617.1	KEGG: acr:Acry_1088 flavoprotein involved in K+ transport-like protein
YP_001641618.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: acr:Acry_0629 alpha/beta hydrolase fold-3 domain protein
YP_001641619.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_B5157 short-chain dehydrogenase/reductase SDR
YP_001641620.1	PFAM: protein of unknown function UPF0061; KEGG: hne:HNE_0163 hypothetical protein
YP_001641621.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc00642 hypothetical protein
YP_001641622.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: bbt:BBta_1806 putative two-component sensor histidine kinase
YP_001641623.1	PFAM: lipolytic protein G-D-S-L family; KEGG: acr:Acry_1996 lipolytic enzyme, G-D-S-L family
YP_001641624.1	KEGG: nwi:Nwi_0742 hypothetical protein
YP_001641625.1	KEGG: jan:Jann_1274 beta-lactamase-like
YP_001641626.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: mes:Meso_1584 hydrolase, TatD family
YP_001641627.1	TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); KEGG: rpe:RPE_2867 methionyl-tRNA synthetase
YP_001641630.1	KEGG: xau:Xaut_4326 DNA-directed DNA polymerase
YP_001641631.1	PFAM: thymidylate kinase; KEGG: mes:Meso_1581 thymidylate kinase
YP_001641632.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO3466 putrescine ABC transporter, permease protein
YP_001641633.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_0165 binding-protein-dependent transport systems inner membrane component
YP_001641634.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rpb:RPB_1454 spermidine/putrescine ABC transporter ATP-binding subunit
YP_001641635.1	PFAM: cyclic nucleotide-binding; KEGG: neu:NE1296 cyclic nucleotide-binding domain:cAMP-dependent protein kinase
YP_001641637.1	KEGG: xau:Xaut_1379 hypothetical protein
YP_001641639.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll6038 hypothetical transport protein
YP_001641640.1	PFAM: aminotransferase class V; KEGG: bja:bll6039 probable SgaA serine-glyoxylate aminotransferase
YP_001641641.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bja:blr6040 transcriptional regulatory protein
YP_001641642.1	KEGG: azo:azo1163 putative hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel
YP_001641643.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B1317 short-chain dehydrogenase
YP_001641644.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: bja:blr6041 putative glycolate oxidase
YP_001641645.1	TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mlo:mll4552 intracellular PHB depolymerase
YP_001641646.1	PFAM: Aldehyde Dehydrogenase_; KEGG: xau:Xaut_2714 aldehyde dehydrogenase
YP_001641647.1	KEGG: acr:Acry_1166 collagen triple helix repeat
YP_001641648.1	KEGG: hne:HNE_3446 ISHne3, transposase
YP_001641649.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: ret:RHE_CH00241 putative recombinase protein, phage integrase family
YP_001641650.1	PFAM: surface presentation of antigens (SPOA) protein; KEGG: nwi:Nwi_1730 flagellar motor switch protein
YP_001641651.1	TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: rpe:RPE_3436 lipoate-protein ligase B
YP_001641652.1	PFAM: glycosyl transferase family 2; KEGG: rpd:RPD_0578 glycosyl transferase, family 2
YP_001641653.1	PFAM: protein of unknown function DUF606; KEGG: reu:Reut_A0176 protein of unknown function DUF606
YP_001641654.1	PFAM: protein of unknown function UPF0118; KEGG: rpc:RPC_1866 protein of unknown function UPF0118
YP_001641655.1	PFAM: response regulator receiver; KEGG: syf:Synpcc7942_1817 response regulator receiver domain protein (CheY-like)
YP_001641656.1	PFAM: pentapeptide repeat protein; KEGG: gvi:gll2892 hypothetical protein
YP_001641657.1	KEGG: mag:amb1112 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001641658.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bja:blr0404 transcriptional regulatory protein
YP_001641659.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:bll0403 hypothetical protein
YP_001641660.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mlo:mll1133 probable two-component response regulator
YP_001641661.1	PFAM: GCN5-related N-acetyltransferase; KEGG: acr:Acry_2841 GCN5-related N-acetyltransferase
YP_001641662.1	PFAM: protein of unknown function DUF983; KEGG: xau:Xaut_0415 protein of unknown function DUF983
YP_001641663.1	TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: rpd:RPD_4131 L-lactate transport
YP_001641664.1	PFAM: manganese containing catalase; KEGG: gka:GK3036 manganese catalase
YP_001641665.1	PFAM: Squalene/phytoene synthase; KEGG: bov:BOV_0889 hypothetical protein
YP_001641666.1	PFAM: protein of unknown function DUF498; KEGG: bov:BOV_0888 hypothetical protein
YP_001641667.1	TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: nha:Nham_1800 SecF protein
YP_001641668.1	TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: rpc:RPC_2776 protein-export membrane protein SecD
YP_001641669.1	TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: xau:Xaut_4308 preprotein translocase, YajC subunit
YP_001641670.1	PFAM: protein of unknown function DUF815; KEGG: xau:Xaut_4247 protein of unknown function DUF815
YP_001641671.1	PFAM: peptidase M23B; KEGG: rpe:RPE_2706 peptidase M23B
YP_001641672.1	PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; KEGG: xau:Xaut_4414 protein-L-isoaspartate O-methyltransferase
YP_001641673.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
YP_001641674.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001641675.1	PFAM: regulatory protein MarR; KEGG: bbt:BBta_4653 putative transcriptional regulatory protein, MarR family
YP_001641676.1	KEGG: rpc:RPC_2652 hypothetical protein
YP_001641677.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pla:Plav_2899 enoyl-CoA hydratase/isomerase
YP_001641678.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_001641680.1	PFAM: RDD domain containing protein; KEGG: atc:AGR_C_2148 hypothetical protein
YP_001641681.1	Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate
YP_001641682.1	TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: rpa:RPA3826 hypothetical protein
YP_001641683.1	KEGG: noc:Noc_0674 hypothetical protein
YP_001641684.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: rpa:RPA4378 maltose O-acetyltransferase
YP_001641685.1	PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: xau:Xaut_1265 protein of unknown function zinc metallopeptidase putative
YP_001641686.1	TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: xau:Xaut_2373 phage SPO1 DNA polymerase-related protein
YP_001641687.1	PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: xau:Xaut_2374 electron-transferring-flavoprotein dehydrogenase
YP_001641688.1	PFAM: peptidase S58 DmpA; KEGG: nha:Nham_2617 peptidase S58, DmpA
YP_001641689.1	TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE0201 hypothetical protein
YP_001641692.1	TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rpe:RPE_2728 cystathionine beta-lyase
YP_001641693.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rha:RHA1_ro03787 probable transcriptional regulator, AraC family
YP_001641694.1	KEGG: rpd:RPD_2220 hypothetical protein
YP_001641695.1	KEGG: tcr:511285.120 ATP-dependent RNA helicase Pfam: DEAD Helicase_C GRP PROSITE: DEAD_ATP_HELICASE GLY_RICH
YP_001641696.1	PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_0861 GCN5-related N-acetyltransferase
YP_001641697.1	KEGG: xau:Xaut_3746 hypothetical protein
YP_001641698.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bvi:Bcep1808_4018 pyridoxamine 5'-phosphate oxidase-related, FMN-binding
YP_001641699.1	KEGG: psb:Psyr_1778 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001641700.1	PFAM: glycosyl transferase family 2; KEGG: ace:Acel_0725 glycosyl transferase, family 2
YP_001641701.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: reu:Reut_A1446 hypothetical protein
YP_001641702.1	KEGG: sme:SMb20088 hypothetical fusion protein; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12
YP_001641703.1	PFAM: heat shock protein Hsp20; KEGG: mlo:mll9627 small heat shock protein
YP_001641704.1	KEGG: bja:bll5218 hypothetical protein
YP_001641705.1	TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: rsq:Rsph17025_2933 DNA mismatch repair protein MutL
YP_001641706.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: reu:Reut_B3825 butyryl-CoA dehydrogenase
YP_001641707.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_2091 ABC transporter related
YP_001641708.1	KEGG: bra:BRADO1608 putative alpha/beta hydrolase fold
YP_001641709.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: mxa:MXAN_4511 RibD domain protein
YP_001641710.1	PFAM: OsmC family protein; KEGG: ajs:Ajs_2509 OsmC family protein
YP_001641711.1	PFAM: protein of unknown function DUF336; KEGG: xau:Xaut_0298 protein of unknown function DUF336
YP_001641712.1	PFAM: extracellular solute-binding protein family 5; KEGG: mes:Meso_0038 extracellular solute-binding protein, family 5
YP_001641713.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsh:Rsph17029_0131 binding-protein-dependent transport systems inner membrane component
YP_001641714.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7599 ABC transporter, permease protein
YP_001641716.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rpd:RPD_1026 major facilitator superfamily MFS_1
YP_001641718.1	PFAM: protein of unknown function DUF1013; KEGG: xau:Xaut_2354 protein of unknown function DUF1013
YP_001641719.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rsh:Rsph17029_3779 transcriptional regulator, LysR family
YP_001641720.1	stationary phase protein that binds TrpR repressor
YP_001641721.1	KEGG: pna:Pnap_0565 thiol:disulfide interchange protein, putative
YP_001641722.1	TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: rpd:RPD_0321 DNA mismatch repair protein MutS
YP_001641724.1	KEGG: nha:Nham_0455 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases
YP_001641725.1	KEGG: bbt:BBta_4432 putative membrane protein of unknown function
YP_001641727.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr7489 lactoylglutathione lyase
YP_001641728.1	TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: rpb:RPB_0271 phage integrase
YP_001641729.1	PFAM: Phosphoglycerate mutase; KEGG: xau:Xaut_4141 phosphoglycerate mutase
YP_001641730.1	PFAM: protein of unknown function DUF344; KEGG: rrs:RoseRS_1635 protein of unknown function DUF344
YP_001641731.1	PFAM: MOSC domain containing protein; KEGG: xau:Xaut_5027 MOSC domain containing protein
YP_001641732.1	KEGG: xau:Xaut_4143 enoyl-acyl carrier protein reductase
YP_001641733.1	PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: bra:BRADO2148 putative heat shock protein DnaJ
YP_001641734.1	KEGG: bja:blr2625 hypothetical protein
YP_001641735.1	KEGG: gox:GOX1988 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding
YP_001641736.1	PFAM: response regulator receiver; KEGG: rpa:RPA4010 response regulator receiver (CheY-like protein)
YP_001641737.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_1135 short-chain dehydrogenase/reductase SDR
YP_001641738.1	KEGG: rci:RRC34 hypothetical protein
YP_001641739.1	PFAM: NUDIX hydrolase; KEGG: xau:Xaut_1476 NUDIX hydrolase
YP_001641740.1	PFAM: conserved hypothetical protein; KEGG: rpa:RPA1072 hypothetical protein
YP_001641741.1	KEGG: rpd:RPD_1241 hypothetical protein
YP_001641742.1	KEGG: smd:Smed_1375 hypothetical protein
YP_001641743.1	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
YP_001641744.1	TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: xau:Xaut_1416 glycine cleavage T protein (aminomethyl transferase)
YP_001641745.1	PFAM: methyladenine glycosylase; KEGG: bbt:BBta_2374 3-methyl-adenine DNA glycosylase I, constitutive
YP_001641746.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: rpb:RPB_1114 metal dependent phosphohydrolase
YP_001641747.1	KEGG: mlo:mll1302 hypothetical protein
YP_001641748.1	TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: bra:BRADO2164 exodeoxyribonuclease small subunit
YP_001641749.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_001641750.1	PFAM: superoxide dismutase copper/zinc binding; KEGG: xau:Xaut_2922 superoxide dismutase copper/zinc binding
YP_001641751.1	TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: xau:Xaut_4163 hemolysin A
YP_001641752.1	PFAM: (Uracil-5)-methyltransferase; KEGG: rpa:RPA0948 possible hypothetical RNA methyltransferase
YP_001641753.1	KEGG: cyb:CYB_0430 tetratricopeptide repeat protein
YP_001641754.1	KEGG: pat:Patl_3215 hypothetical protein
YP_001641755.1	PFAM: protein of unknown function DUF159; KEGG: pla:Plav_0767 protein of unknown function DUF159
YP_001641756.1	PFAM: protein of unknown function DUF482; KEGG: mlo:mlr0661 hypothetical protein
YP_001641757.1	KEGG: rpa:RPA3439 putative hydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001641758.1	TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: azo:azo2292 methylated-DNA--[protein]-cysteine S-methyltransferase
YP_001641759.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mlo:mll4860 hypothetical protein
YP_001641760.1	PFAM: histidine triad (HIT) protein; KEGG: mlo:mlr0662 probable Hit-like protein involved in cell-cycle regulation
YP_001641761.1	PFAM: type IV pilus assembly PilZ; KEGG: bbt:BBta_7466 hypothetical protein
YP_001641763.1	PFAM: glycoside hydrolase 15-related; KEGG: sru:SRU_0387 glycosyl hydrolase, family 15
YP_001641765.1	KEGG: hch:HCH_06986 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase
YP_001641766.1	PFAM: sugar isomerase (SIS); KEGG: xcv:XCV0770 glucosamine-6-phosphate deaminase
YP_001641767.1	catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway
YP_001641768.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sme:SMb20092 hypothetical protein
YP_001641769.1	PFAM: Asparaginase/glutaminase; KEGG: har:HEAR1103 putative L-asparaginase; putative signal peptide protein
YP_001641770.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: ccr:CC_0522 phospholipase D family protein
YP_001641771.1	PFAM: SNARE associated Golgi protein; KEGG: rba:RB11207 hypothetical protein
YP_001641773.1	PFAM: Surfeit locus 1 family protein; KEGG: bbt:BBta_2034 putative SURF1 family protein
YP_001641774.1	TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: smd:Smed_4369 cytochrome o ubiquinol oxidase subunit IV
YP_001641775.1	TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: rle:pRL110040 putative cytochrome o ubiquinol oxidase subunit III
YP_001641776.1	KEGG: smd:Smed_4371 cytochrome o ubiquinol oxidase subunit I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_001641777.1	TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: sme:SMb21487 putative cytochrome o ubiquinol oxidase chain II protein
YP_001641778.1	KEGG: rle:pRL110043 putative transmembrane transporter protein
YP_001641779.1	PFAM: acriflavin resistance protein; KEGG: mlo:mll5518 RND efflux transporter
YP_001641780.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rle:pRL120697 putative HlyD family secretion protein
YP_001641781.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpa:RPA1959 putative RND efflux membrane protein
YP_001641782.1	PFAM: regulatory protein TetR; KEGG: mmr:Mmar10_2114 transcriptional regulator, TetR family
YP_001641783.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rpd:RPD_3789 response regulator receiver
YP_001641784.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rpd:RPD_3788 phytochrome
YP_001641785.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mlo:mll6762 two component system response regulator
YP_001641786.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: nha:Nham_3000 two component transcriptional regulator, LuxR family
YP_001641787.1	PFAM: glycosyl transferase family 2; KEGG: rpe:RPE_3510 glycosyl transferase, family 2
YP_001641788.1	KEGG: rpa:RPA0172 hypothetical protein
YP_001641789.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rpc:RPC_4634 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001641790.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS05312 probable transcription regulator protein
YP_001641792.1	PFAM: protein of unknown function DUF81; KEGG: rme:Rmet_3822 protein of unknown function DUF81
YP_001641793.1	KEGG: ade:Adeh_4032 general secretory system II, protein E-like
YP_001641794.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: xau:Xaut_0504 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
YP_001641795.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
YP_001641797.1	PFAM: regulatory protein TetR; KEGG: rpc:RPC_1901 transcriptional regulator, TetR family
YP_001641798.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:bll3872 HlyD family secretion protein
YP_001641799.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bja:bll3871 AcrB/AcrD/AcrF family protein
YP_001641800.1	PFAM: regulatory protein TetR; KEGG: sgl:SG0229 putative transcriptional regulator
YP_001641801.1	PFAM: ThiJ/PfpI domain protein; KEGG: aav:Aave_0745 transcriptional regulator, fis family
YP_001641802.1	KEGG: msm:MSMEG_3970 glutamyl-tRNA(Gln) amidotransferase subunit A
YP_001641803.1	PFAM: peptidase membrane zinc metallopeptidase putative; KEGG: aeh:Mlg_1818 peptidase, membrane zinc metallopeptidase, putative
YP_001641804.1	PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: jan:Jann_2058 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001641805.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rle:RL2334 putative AraC family transcriptional regulator
YP_001641806.1	KEGG: mlo:mlr4665 hypothetical protein
YP_001641807.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rle:pRL120187 putative amine oxidase family protein
YP_001641808.1	PFAM: ThiJ/PfpI domain protein; KEGG: rpb:RPB_2555 twin-arginine translocation pathway signal
YP_001641809.1	KEGG: mms:mma_2325 hypothetical protein
YP_001641810.1	KEGG: csa:Csal_0183 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein
YP_001641811.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_0182 binding-protein-dependent transport systems inner membrane component
YP_001641812.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb1865 ABC-type nitrate/sulfonate/bicarbonate transport system
YP_001641813.1	KEGG: atc:AGR_C_779 hypothetical protein
YP_001641815.1	TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: bms:BRA1063 peptide chain release factor 3
YP_001641816.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_3017 short-chain dehydrogenase/reductase SDR
YP_001641819.1	KEGG: bra:BRADO3295 hypothetical protein; putative signal sequence
YP_001641820.1	PFAM: Hemolysin-type calcium-binding region; KEGG: ana:alr7304 similar to hlyA
YP_001641823.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: ecw:EcE24377A_2232 conserved hypothetical protein TIGR02594
YP_001641828.1	PFAM: integrase family protein; KEGG: sat:SYN_00695 phage integrase family protein
YP_001641829.1	KEGG: ava:Ava_3457 hypothetical protein
YP_001641830.1	KEGG: bov:BOV_1943 hypothetical protein
YP_001641831.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_001641832.1	PFAM: RNA-binding S4 domain protein; KEGG: acr:Acry_3089 RNA-binding S4 domain protein
YP_001641833.1	PFAM: helicase domain protein; KEGG: xau:Xaut_2639 helicase domain protein
YP_001641835.1	KEGG: xau:Xaut_1938 hypothetical protein
YP_001641836.1	PFAM: Heme NO binding domain protein; KEGG: hch:HCH_03700 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
YP_001641837.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: dar:Daro_1579 PAS:GGDEF
YP_001641838.1	PFAM: Glucokinase; KEGG: oan:Oant_1332 glucokinase
YP_001641839.1	KEGG: bvi:Bcep1808_1075 HAD-superfamily hydrolase, subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase
YP_001641840.1	PFAM: protein of unknown function DUF427; KEGG: mjl:Mjls_3005 protein of unknown function DUF427
YP_001641841.1	PFAM: beta-lactamase; KEGG: sil:SPO1641 beta-lactamase
YP_001641842.1	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: pap:PSPA7_6064 probable choline transporter
YP_001641843.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: rpd:RPD_0625 NADH dehydrogenase (ubiquinone), 24 kDa subunit
YP_001641844.1	PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: gbe:GbCGDNIH1_1933 NAD-dependent formate dehydrogenase beta subunit (FdsB)
YP_001641845.1	TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: bbt:BBta_3089 formate dehydrogenase, alpha subunit
YP_001641846.1	KEGG: gbe:GbCGDNIH1_1936 NAD-dependent formate dehydrogenase delta subunit (FdsD)
YP_001641847.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_3482 transcriptional regulator, LysR family
YP_001641849.1	TIGRFAM: small GTP-binding protein; GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: xau:Xaut_2055 GTP-binding protein Obg/CgtA
YP_001641851.1	PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_2144 GCN5-related N-acetyltransferase
YP_001641852.1	involved in the peptidyltransferase reaction during translation
YP_001641853.1	PFAM: ribosomal protein L21; KEGG: smd:Smed_3005 ribosomal protein L21
YP_001641854.1	PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: nha:Nham_2631 protein of unknown function DUF853, NPT hydrolase putative
YP_001641855.1	KEGG: oan:Oant_2694 hypothetical protein
YP_001641856.1	KEGG: rpa:RPA0316 hypothetical protein
YP_001641857.1	PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_3861 major facilitator superfamily MFS_1
YP_001641859.1	PFAM: Patatin; KEGG: rpd:RPD_2041 patatin
YP_001641860.1	KEGG: rsp:RSP_6158 light-harvesting complex alpha subunit
YP_001641862.1	KEGG: nwi:Nwi_2052 hypothetical protein
YP_001641863.1	PFAM: diacylglycerol kinase catalytic region; KEGG: rru:Rru_A3289 diacylglycerol kinase, catalytic region
YP_001641864.1	PFAM: metallophosphoesterase; KEGG: mlo:mll9676 3',5'-cyclic-nucleotide phosphodiesterase CpdA homolog
YP_001641865.1	PFAM: Na+/solute symporter; KEGG: gtn:GTNG_3183 sodium/proline symporter
YP_001641866.1	KEGG: gtn:GTNG_3184 hypothetical protein
YP_001641867.1	KEGG: rpe:RPE_0362 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001641868.1	KEGG: atc:AGR_C_779 hypothetical protein
YP_001641869.1	PFAM: Nucleotidyl transferase; KEGG: xau:Xaut_3298 nucleotidyl transferase
YP_001641870.1	PFAM: aminoglycoside phosphotransferase; protein of unknown function UPF0079; KEGG: xau:Xaut_3297 protein of unknown function UPF0079
YP_001641871.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: nha:Nham_0053 PAS/PAC sensor signal transduction histidine kinase
YP_001641872.1	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine
YP_001641873.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rle:RL4301 putative acetyl-coenzyme A synthetase
YP_001641874.1	PFAM: nitroreductase; KEGG: xau:Xaut_2772 nitroreductase
YP_001641875.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpe:RPE_2855 enoyl-CoA hydratase/isomerase
YP_001641876.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: gox:GOX0070 hypothetical membrane-spanning protein
YP_001641877.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: gox:GOX0071 cardiolipin synthetase
YP_001641878.1	TIGRFAM: double-strand break repair protein AddB; KEGG: xau:Xaut_3299 double-strand break repair protein AddB
YP_001641879.1	TIGRFAM: double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; KEGG: bbt:BBta_0090 putative helicase-exonuclease type V protein family, AddA subunit
YP_001641880.1	PFAM: glucose sorbosone dehydrogenase; KEGG: atc:AGR_L_1629 hypothetical protein
YP_001641881.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bov:BOV_2021 thioredoxin
YP_001641882.1	KEGG: xau:Xaut_2469 porin
YP_001641883.1	TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; KEGG: rpd:RPD_0200 FolC bifunctional protein
YP_001641884.1	TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: rpe:RPE_0456 acetyl-CoA carboxylase, carboxyl transferase, beta subunit
YP_001641885.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_001641886.1	PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; KEGG: oan:Oant_0019 NADH pyrophosphatase-like protein
YP_001641887.1	PFAM: histidine triad (HIT) protein; KEGG: pla:Plav_2685 histidine triad (HIT) protein
YP_001641888.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rpa:RPA0145 metal dependent phosphohydrolase with a response regulator receiver domain
YP_001641889.1	PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: xau:Xaut_1589 DEAD/DEAH box helicase domain protein
YP_001641890.1	KEGG: rsq:Rsph17025_0561 hypothetical protein
YP_001641891.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rpe:RPE_3141 putative signal transduction histidine kinase
YP_001641892.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bra:BRADO1924 putative two-component response regulator, lux-R family
YP_001641893.1	PFAM: TENA/THI-4 domain protein; KEGG: har:HEAR0909 putative transcriptional activator (TenA family)
YP_001641894.1	PFAM: amino acid permease-associated region; KEGG: sus:Acid_4944 amino acid permease-associated region
YP_001641895.1	PFAM: beta-lactamase domain protein; KEGG: ret:RHE_PE00054 hypothetical protein
YP_001641896.1	PFAM: protein of unknown function DUF949; KEGG: bra:BRADO0605 conserved hypothetical protein; putative exported protein; putative transcriptiona regulatory protein at C-terminal
YP_001641897.1	KEGG: smd:Smed_4600 ABC transporter related
YP_001641898.1	KEGG: reu:Reut_B4429 polysulphide reductase, NrfD
YP_001641899.1	KEGG: sus:Acid_0494 hypothetical protein
YP_001641900.1	PFAM: glutamine amidotransferase class-II; KEGG: stm:STM0311 putative glutamine amidotransferase
YP_001641901.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mes:Meso_3107 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001641902.1	PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator
YP_001641904.1	KEGG: bra:BRADO5746 hypothetical protein
YP_001641905.1	PFAM: ferredoxin; KEGG: bra:BRADO5081 2Fe-2S ferredoxin (FdII)
YP_001641906.1	PFAM: Hpt domain protein; KEGG: bja:bll5886 two-component hybrid sensor and regulator
YP_001641907.1	KEGG: rle:RL2654 putative transmembrane protein
YP_001641908.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: xau:Xaut_4454 transcriptional regulator, XRE family
YP_001641909.1	KEGG: bja:bll5905 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1
YP_001641910.1	PFAM: thiamine monophosphate synthase; KEGG: atc:AGR_L_3059 thiamine-phosphate pyrophosphorylase
YP_001641911.1	KEGG: bbr:BB4287 hypothetical protein
YP_001641913.1	PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator
YP_001641914.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis
YP_001641915.1	KEGG: uma:UM00593.1 hypothetical protein
YP_001641916.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc03196 putative molybdate-binding periplasmic ABC transporter protein
YP_001641918.1	PFAM: ribosomal L11 methyltransferase; KEGG: rpc:RPC_3290 ribosomal L11 methyltransferase
YP_001641919.1	PFAM: creatinase; peptidase M24; KEGG: rpd:RPD_3379 peptidase M24
YP_001641920.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rsq:Rsph17025_3233 hypothetical protein
YP_001641921.1	PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: zmo:ZMO0139 fructosamine-3-kinase
YP_001641924.1	PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: bbt:BBta_1667 putative ABC transporter (fused ATP-binding and permease components)
YP_001641925.1	KEGG: xau:Xaut_2465 hypothetical protein
YP_001641927.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ret:RHE_CH01279 putative pyridoxine 5'-phosphate oxidase protein
YP_001641928.1	PFAM: Glutathione S-transferase domain; KEGG: rle:RL1425 putative glutathione S-transferase
YP_001641929.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: nar:Saro_2765 transcriptional regulator, LysR family
YP_001641930.1	Catalyzes the reduction of sulfite to sulfide, an essential step in the anaerobic sulfate-respiration pathway
YP_001641931.1	ferredoxin-dependent assimilatory nitrite reductase
YP_001641932.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: rpe:RPE_1261 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001641933.1	KEGG: xau:Xaut_2502 nitrate ABC transporter, ATPase subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001641934.1	TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO2472 nitrate transport permease protein (NrtB)
YP_001641935.1	KEGG: rpb:RPB_1760 twin-arginine translocation pathway signal
YP_001641936.1	KEGG: xau:Xaut_2505 putative nitrate transport protein
YP_001641937.1	PFAM: response regulator receiver; ANTAR domain protein; KEGG: mlo:mlr2855 two-component response regulator
YP_001641938.1	KEGG: lma:LmjF35.0290 hypothetical protein, conserved
YP_001641939.1	PFAM: glycoside hydrolase 15-related; KEGG: nwi:Nwi_2309 glycoside hydrolase 15-related
YP_001641940.1	TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: gbe:GbCGDNIH1_0856 transketolase
YP_001641941.1	catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; catalyzes isomerization of glucose 6-phosphate and fructose 6-phosphate
YP_001641942.1	PFAM: SNARE associated Golgi protein; KEGG: acr:Acry_2490 uncharacterized membrane-associated protein-like protein
YP_001641944.1	KEGG: rru:Rru_A1712 chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein
YP_001641945.1	KEGG: kra:Krad_3429 hypothetical protein
YP_001641946.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nwi:Nwi_2310 short chain dehydrogenase
YP_001641947.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: smd:Smed_2643 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
YP_001641948.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sme:SMc03972 putative multidrug efflux system transmembrane protein
YP_001641949.1	PFAM: Rhodanese domain protein; KEGG: xau:Xaut_2590 rhodanese domain protein
YP_001641950.1	PFAM: glycosyl transferase group 1; KEGG: swi:Swit_4016 glycosyl transferase, group 1
YP_001641952.1	PFAM: autoinducer synthesis protein; KEGG: nwi:Nwi_0626 autoinducer synthesis protein
YP_001641953.1	PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: rpb:RPB_3321 transcriptional regulator, LuxR family
YP_001641955.1	TIGRFAM: methyltransferase FkbM family; KEGG: mav:MAV_1133 methyltransferase FkbM
YP_001641956.1	KEGG: gox:GOX0967 hypothetical protein
YP_001641957.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gbe:GbCGDNIH1_2337 transcriptional regulators, LysR family
YP_001641959.1	PFAM: acriflavin resistance protein; KEGG: bra:BRADO6304 putative multidrug efflux transporter, AcrB/AcrD/AcrF family protein
YP_001641960.1	KEGG: bra:BRADO6305 putative multidrug resistant protein
YP_001641961.1	KEGG: nar:Saro_0724 glycosyl transferase, family 2
YP_001641963.1	PFAM: Pyrrolo-quinoline quinone; KEGG: bxe:Bxe_B2415 putative quinoprotein alcohol dehydrogenase
YP_001641965.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: rpe:RPE_3014 signal transduction histidine kinase
YP_001641967.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: pfo:Pfl_4169 twin-arginine translocation pathway signal
YP_001641968.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bam:Bamb_1231 (2Fe-2S)-binding domain protein
YP_001641969.1	KEGG: xcv:XCV3887 hypothetical protein
YP_001641972.1	KEGG: gbe:GbCGDNIH1_1334 phosphoenolpyruvate carboxylase
YP_001641974.1	KEGG: lma:LmjF35.0290 hypothetical protein, conserved
YP_001641975.1	PFAM: Saccharopine dehydrogenase; KEGG: ret:RHE_CH01011 hypothetical protein
YP_001641976.1	PFAM: protein of unknown function DUF985; KEGG: mmr:Mmar10_2382 protein of unknown function DUF985
YP_001641977.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: zmo:ZMO0689 glucose-fructose oxidoreductase chain A
YP_001641978.1	PFAM: protein of unknown function DUF606; KEGG: mul:MUL_3006 hypothetical protein
YP_001641979.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pde:Pden_3396 transcriptional regulator, LysR family
YP_001641980.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: xau:Xaut_1258 alcohol dehydrogenase zinc-binding domain protein
YP_001641981.1	KEGG: bbt:BBta_4271 putative histidine kinase with PAS/PAC motif; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001641982.1	PFAM: SH3 type 3 domain protein
YP_001641983.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xau:Xaut_1259 short-chain dehydrogenase/reductase SDR
YP_001641984.1	FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.
YP_001641985.1	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_001641986.1	PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: smd:Smed_1740 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
YP_001641987.1	Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides
YP_001641989.1	KEGG: aha:AHA_0450 GGDEF family protein
YP_001641990.1	PFAM: protein of unknown function UPF0118; KEGG: gbe:GbCGDNIH1_0407 hypothetical membrane spanning protein
YP_001641991.1	KEGG: cvi:CV_1739 hypothetical protein
YP_001641993.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: rle:RL3719 hypothetical protein
YP_001641994.1	KEGG: xau:Xaut_2465 hypothetical protein
YP_001641995.1	PFAM: heat shock protein Hsp20; KEGG: xau:Xaut_2821 heat shock protein HSP20
YP_001641996.1	PFAM: alpha/beta hydrolase fold; KEGG: rpa:RPA0888 putative lysophospholipase L2
YP_001641997.1	PFAM: Hemolysin-type calcium-binding region; KEGG: pen:PSEEN0141 surface adhesion protein
YP_001641998.1	TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: bbt:BBta_1389 putative inositol monophosphatase family protein
YP_001641999.1	PFAM: protein of unknown function UPF0118; KEGG: gbe:GbCGDNIH1_2397 hypothetical membrane spanning protein
YP_001642000.1	PFAM: LamB/YcsF family protein; KEGG: rpe:RPE_3039 LamB/YcsF family protein
YP_001642001.1	catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate
YP_001642002.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mxa:MXAN_0453 putative general stress protein 26
YP_001642004.1	KEGG: atc:AGR_C_1282 MRP protein homolog
YP_001642005.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: rpe:RPE_3728 molybdopterin-guanine dinucleotide biosynthesis protein A
YP_001642006.1	TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: bbt:BBta_4371 DNA gyrase, subunit A, type II topoisomerase
YP_001642007.1	KEGG: xau:Xaut_2469 porin
YP_001642008.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
YP_001642009.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: oan:Oant_2179 peptidyl-prolyl cis-trans isomerase cyclophilin type
YP_001642010.1	KEGG: rpa:RPA2603 hypothetical protein
YP_001642011.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: hne:HNE_1405 putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
YP_001642012.1	PFAM: response regulator receiver; KEGG: rpd:RPD_3796 response regulator receiver
YP_001642013.1	KEGG: swi:Swit_4947 hypothetical protein
YP_001642014.1	KEGG: oan:Oant_3146 hypothetical protein
YP_001642015.1	KEGG: nha:Nham_3765 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein
YP_001642016.1	KEGG: sme:SMb20474 hypothetical protein
YP_001642017.1	PFAM: Patatin; KEGG: bte:BTH_II0018 patatin-like phospholipase
YP_001642018.1	PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: rpc:RPC_2765 ion transport 2
YP_001642020.1	PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: bja:blr2316 probable NADH-ubiquinone oxidoreductase chain F
YP_001642021.1	TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: bja:blr2317 formate dehydrogenase alpha subunit
YP_001642022.1	PFAM: polysaccharide biosynthesis protein; KEGG: aba:Acid345_3798 hypothetical protein
YP_001642023.1	KEGG: mag:amb0043 hypothetical protein
YP_001642024.1	PFAM: polysaccharide deacetylase; KEGG: fra:Francci3_1587 polysaccharide deacetylase
YP_001642025.1	PFAM: glycosyl transferase group 1; KEGG: bra:BRADO7053 hypothetical protein, putative glycosyl transferase
YP_001642026.1	KEGG: dra:DR_2133 hypothetical protein
YP_001642027.1	KEGG: afw:Anae109_1237 hypothetical protein
YP_001642028.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: mlo:mll2090 hypothetical protein
YP_001642029.1	KEGG: ret:RHE_CH01355 exopolysaccharide production protein
YP_001642030.1	KEGG: rpb:RPB_0997 hypothetical protein
YP_001642031.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bja:bll7782 putative 3-oxoacyl-[acyl-carrier-protein] reductase
YP_001642032.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bra:BRADO6291 putative 2-succinylbenzoate--CoA ligase (OSB-CoA synthetase) (o-succinylbenzoyl-CoA synthetase)
YP_001642033.1	KEGG: bja:bsl7784 probable acyl carrier protein
YP_001642034.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bja:blr0230 probable esterase
YP_001642035.1	KEGG: bja:bll0957 hypothetical protein
YP_001642036.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rpa:RPA4598 possible acyl-CoA dehydrogenase
YP_001642037.1	KEGG: bja:bsr0959 hypothetical protein
YP_001642038.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: atc:AGR_L_2798 hypothetical protein
YP_001642039.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit
YP_001642041.1	PFAM: aminotransferase class IV; KEGG: bja:bll0229 branched-chain amino acid aminotransferase
YP_001642042.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: rpa:RPA4600 hypothetical protein
YP_001642043.1	KEGG: rpd:RPD_1104 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_001642044.1	catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis
YP_001642045.1	activates fatty acids by binding to coenzyme A; may be involved in acyclic terpene utilization
YP_001642046.1	KEGG: aba:Acid345_3798 hypothetical protein
YP_001642047.1	KEGG: rpe:RPE_3501 O-antigen polymerase
YP_001642049.1	PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: xau:Xaut_0942 radical SAM domain protein
YP_001642050.1	TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: net:Neut_1702 monovalent cation/proton antiporter, MnhG/PhaG subunit
YP_001642051.1	PFAM: multiple resistance and pH regulation protein F; KEGG: rpa:RPA2793 multicomponent K+:H+ antiporter subunit F
YP_001642052.1	PFAM: cation antiporter; KEGG: nha:Nham_1007 cation antiporter
YP_001642053.1	subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone
YP_001642054.1	subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali
YP_001642055.1	subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+
YP_001642057.1	TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: swo:Swol_0617 UDP-glucose 6-dehydrogenase
YP_001642058.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: swo:Swol_0618 nucleoside-diphosphate-sugar epimerase
YP_001642059.1	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: rle:pRL90132 putative GDP-L-fucose synthetase
YP_001642060.1	TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: rpe:RPE_3494 glycosyl transferase, WecB/TagA/CpsF family
YP_001642061.1	PFAM: glycosyl transferase group 1; KEGG: bra:BRADO7042 putative glycosyltransferase, group 1
YP_001642063.1	PFAM: condensation domain protein; phosphopantetheine-binding; KEGG: psb:Psyr_2608 amino acid adenylation
YP_001642064.1	TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: mes:Meso_2580 amino acid adenylation domain
YP_001642065.1	KEGG: lma:LmjF35.0290 hypothetical protein, conserved
YP_001642066.1	PFAM: Phosphoglycerate mutase; KEGG: sme:SMc03822 hypothetical protein
YP_001642067.1	PFAM: aldo/keto reductase; KEGG: mpt:Mpe_A1746 putative oxidoreductase
YP_001642068.1	PFAM: plasmid stabilization system; KEGG: bbt:BBta_4865 hypothetical protein
YP_001642069.1	KEGG: rpe:RPE_1421 putative transcriptional regulators, CopG/Arc/MetJ family
YP_001642070.1	PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rpd:RPD_3462 ATPase associated with various cellular activities, AAA_5
YP_001642073.1	PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: ccr:CC_3496 TrkA family protein
YP_001642074.1	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
YP_001642075.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_001642076.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rpb:RPB_1990 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase
YP_001642077.1	TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rpb:RPB_1989 UDP-N-acetylmuramyl-tripeptide synthetases
YP_001642078.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: bra:BRADO5665 division-specific transpeptidase, penicillin-binding protein
YP_001642079.1	KEGG: bbt:BBta_6181 putative exported protein of unknown function
YP_001642080.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: xau:Xaut_1852 S-adenosyl-methyltransferase MraW
YP_001642081.1	KEGG: rpc:RPC_3294 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: NAD-dependent DNA ligase
YP_001642083.1	PFAM: protein of unknown function DUF820; KEGG: ana:alr1460 hypothetical protein
YP_001642084.1	PFAM: PfkB domain protein; KEGG: xau:Xaut_2565 PfkB domain protein
YP_001642085.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: gvi:glr0841 FKBP-type peptidyl-prolyl cis-trans isomerase
YP_001642087.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bja:blr4370 hypothetical protein
YP_001642088.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001642089.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: csa:Csal_3199 transcriptional regulator, GntR family
YP_001642090.1	PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: rpc:RPC_1602 aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_001642091.1	KEGG: bra:BRADO3437 hypothetical protein
YP_001642092.1	PFAM: glutamate--cysteine ligase GCS2; KEGG: xau:Xaut_4105 glutamate--cysteine ligase GCS2
YP_001642094.1	PFAM: peptidase S10 serine carboxypeptidase; KEGG: bbt:BBta_5174 putative peptidase S10, serine carboxypeptidase
YP_001642095.1	PFAM: DNA polymerase III chi subunit HolC; KEGG: bja:blr4109 putative DNA polymerase III chi subunit
YP_001642096.1	KEGG: mgm:Mmc1_2179 putative outer membrane adhesin like proteiin
YP_001642097.1	PFAM: glutathionylspermidine synthase; KEGG: bja:bll2198 hypothetical protein
YP_001642098.1	KEGG: pde:Pden_1246 hypothetical protein
YP_001642099.1	PFAM: protein of unknown function DUF350; KEGG: bja:bll2199 hypothetical protein
YP_001642100.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_001642101.1	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: ret:RHE_CH02185 protein-export translocase protein
YP_001642103.1	KEGG: atc:AGR_C_2481 hypothetical protein
YP_001642105.1	PFAM: triosephosphate isomerase; KEGG: rle:RL2513 putative triosephosphate isomerase
YP_001642106.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rpa:RPA2889 putative peptidyl-prolyl cis-trans isomerse D
YP_001642107.1	KEGG: xau:Xaut_4378 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like
YP_001642108.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rru:Rru_A1293 chemotaxis sensory transducer
YP_001642109.1	TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: xau:Xaut_4377 glutamine amidotransferase of anthranilate synthase
YP_001642110.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_001642111.1	PFAM: Indole-3-glycerol phosphate synthase; KEGG: mes:Meso_1639 indole-3-glycerol phosphate synthase
YP_001642112.1	TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: xau:Xaut_4373 molybdenum cofactor biosynthesis protein C
YP_001642113.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: bja:blr4825 molybdopterin biosynthesis protein
YP_001642114.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_001642115.1	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis
YP_001642116.1	PFAM: protein of unknown function DUF1009; KEGG: rpc:RPC_2448 protein of unknown function DUF1009
YP_001642117.1	catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM
YP_001642118.1	PFAM: protein of unknown function DUF188; KEGG: rpc:RPC_3085 protein of unknown function DUF188
YP_001642119.1	KEGG: ret:RHE_CH01926 citrate synthase protein; TIGRFAM: citrate synthase I; PFAM: Citrate synthase
YP_001642120.1	TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: xau:Xaut_4369 glutamyl-tRNA synthetase
YP_001642121.1	PFAM: ComEC/Rec2-related protein; KEGG: bja:bll4830 hypothetical protein
YP_001642122.1	Represses a number of genes involved in the response to DNA damage
YP_001642123.1	PFAM: protein of unknown function DUF1236; KEGG: rpc:RPC_2866 protein of unknown function DUF1236
YP_001642124.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: oan:Oant_1720 metabolite/H+ symporter, major facilitator superfamily (MFS)
YP_001642125.1	PFAM: protein of unknown function DUF849; KEGG: bja:bll5461 hypothetical protein
YP_001642126.1	KEGG: bbt:BBta_2879 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase
YP_001642128.1	PFAM: aldo/keto reductase; KEGG: gbe:GbCGDNIH1_0254 aldo/keto reductase family protein
YP_001642129.1	KEGG: mfa:Mfla_0988 hypothetical protein
YP_001642130.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bja:blr2506 putative chemotaxis protein
YP_001642131.1	KEGG: xau:Xaut_3516 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein
YP_001642132.1	KEGG: ecx:EcHS_A4169 putative lipoprotein
YP_001642133.1	TIGRFAM: valyl-tRNA synthetase; KEGG: rpb:RPB_2892 valyl-tRNA synthetase
YP_001642134.1	KEGG: bja:blr4474 hypothetical protein
YP_001642135.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: rpc:RPC_2568 type I secretion outer membrane protein, TolC
YP_001642136.1	PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: bbt:BBta_3944 putative protein-L-isoaspartate O-methyltransferase
YP_001642139.1	KEGG: net:Neut_1746 integrase, catalytic region
YP_001642141.1	KEGG: rxy:Rxyl_3078 hypothetical protein
YP_001642142.1	KEGG: smd:Smed_2010 hypothetical protein
YP_001642145.1	KEGG: aav:Aave_3825 hypothetical protein
YP_001642146.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: hydroxyethylthiazole kinase; protein of unknown function UPF0031; KEGG: xcv:XCV1201 hypothetical protein
YP_001642148.1	KEGG: rsh:Rsph17029_1329 hypothetical protein
YP_001642152.1	TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: cvi:CV_0938 ABC transporter phosphate-binding protein
YP_001642153.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_0013 phosphate ABC transporter, inner membrane subunit PstC
YP_001642154.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll3720 phosphate transport system permease protein pstA
YP_001642155.1	KEGG: rpd:RPD_0891 phosphate transport system permease protein 1; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001642156.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: bja:blr1095 phosphate transport system regulatory protein
YP_001642157.1	TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xau:Xaut_0202 two component transcriptional regulator, winged helix family
YP_001642158.1	PFAM: GcrA cell cycle regulator; KEGG: xau:Xaut_1217 GcrA cell cycle regulator
YP_001642159.1	PFAM: Domain of unknown function DUF1849; KEGG: nha:Nham_2446 hypothetical protein
YP_001642160.1	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function
YP_001642161.1	KEGG: bra:BRADO4902 precorrin-6A reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK
YP_001642162.1	TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: bra:BRADO4913 cobyric acid synthase
YP_001642163.1	TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: mlo:mlr1304 cobalamin biosynthetic protein cobD
YP_001642164.1	TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: bra:BRADO4915 putative threonine-phosphate decarboxylase
YP_001642165.1	PFAM: major facilitator superfamily MFS_1; KEGG: bmn:BMA10247_0490 major facilitator family transporter
YP_001642167.1	PFAM: Malonyl-CoA decarboxylase; KEGG: smd:Smed_5137 malonyl-CoA decarboxylase
YP_001642168.1	PFAM: CsbD family protein; KEGG: bja:blr1496 hypothetical protein
YP_001642169.1	TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bja:blr1488 3-hydroxybutyrate dehydrogenase
YP_001642170.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein
YP_001642171.1	KEGG: swi:Swit_3999 hypothetical protein
YP_001642172.1	PFAM: protein of unknown function DUF949; KEGG: bbt:BBta_7577 putative exported protein of unknown function with transcriptiona regulatory protein domain (C-term)
YP_001642173.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_001642174.1	KEGG: maq:Maqu_0399 DNA polymerase, beta domain protein region
YP_001642175.1	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: azo:azo1337 conserved hypothetical peptidoglycan-binding protein
YP_001642176.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_001642177.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: bch:Bcen2424_4912 2-nitropropane dioxygenase, NPD
YP_001642178.1	KEGG: xau:Xaut_4661 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_001642179.1	KEGG: xau:Xaut_4662 phosphatidylserine decarboxylase related protein; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related
YP_001642180.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_4185 ABC transporter related
YP_001642181.1	PFAM: Peptidoglycan-binding LysM; KEGG: bra:BRADO3522 conserved hypothetical protein; putative C-terminal Lysin domain
YP_001642182.1	PFAM: conserved hypothetical protein; KEGG: xau:Xaut_4183 hypothetical protein
YP_001642183.1	KEGG: xau:Xaut_2554 hypothetical protein
YP_001642184.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_001642185.1	KEGG: rpe:RPE_1997 hypothetical protein
YP_001642186.1	PFAM: CreA family protein; KEGG: xau:Xaut_4719 CreA family protein
YP_001642187.1	KEGG: bja:bll3788 hypothetical protein
YP_001642188.1	PFAM: OmpA/MotB domain protein; KEGG: rpa:RPA0213 possible OmpA family member
YP_001642189.1	PFAM: major facilitator superfamily MFS_1; KEGG: pau:PA14_66510 putative MFS transporter
YP_001642190.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: rpe:RPE_1372 3-demethylubiquinone-9 3-methyltransferase
YP_001642191.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: xau:Xaut_0336 methyltransferase type 11
YP_001642192.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_001642193.1	PFAM: secretion protein HlyD family protein; KEGG: bja:blr0261 hypothetical protein
YP_001642194.1	PFAM: protein of unknown function DUF1656; KEGG: pen:PSEEN1299 hypothetical protein
YP_001642195.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: bja:blr0260 hypothetical protein
YP_001642196.1	KEGG: swi:Swit_0866 hypothetical protein
YP_001642198.1	PFAM: Glutathione S-transferase domain; KEGG: xau:Xaut_3798 glutathione S-transferase domain
YP_001642199.1	TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; WD40 domain protein beta Propeller; KEGG: rpe:RPE_4707 transport system periplasmic component
YP_001642200.1	TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA; KEGG: olu:OSTLU_30657 predicted protein
YP_001642201.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: smd:Smed_2629 biopolymer transport TolR
YP_001642202.1	TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: xau:Xaut_3059 Tol-Pal system TolQ
YP_001642203.1	PFAM: chemotaxis sensory transducer; KEGG: rru:Rru_A1053 chemotaxis sensory transducer
YP_001642204.1	TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: rpc:RPC_4799 4-hydroxybenzoyl-CoA thioesterase
YP_001642206.1	PFAM: metallophosphoesterase; KEGG: mlo:mll3894 hypothetical protein
YP_001642207.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_001642208.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mes:Meso_1133 twin-arginine translocation pathway signal
YP_001642209.1	PFAM: Ferritin Dps family protein; KEGG: rle:RL0342 putative ferritin-family protein
YP_001642210.1	PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: xac:XAC4077 conserved hypothetical protein
YP_001642211.1	PFAM: class II aldolase/adducin family protein; KEGG: bja:bll6170 L-fuculose phosphate aldolase
YP_001642212.1	PFAM: ROSMUCR transcriptional regulator; KEGG: xau:Xaut_2842 transcriptional regulator, MucR family
YP_001642213.1	PFAM: restriction endonuclease; KEGG: pmm:PMM1014 hypothetical protein
YP_001642214.1	PFAM: PepSY-associated TM helix domain protein; KEGG: bja:blr4505 hypothetical protein
YP_001642215.1	KEGG: bja:bll0910 penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_001642216.1	PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rle:RL1602 putative transmembrane adenylate cyclase
YP_001642217.1	KEGG: acr:Acry_1919 uncharacterized relative of glutathione S-transferase MAPEG superfamily-like protein
YP_001642218.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rpc:RPC_4741 cobyrinic acid a,c-diamide synthase
YP_001642219.1	KEGG: rpb:RPB_1821 hypothetical protein
YP_001642221.1	TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: xau:Xaut_1166 chaperonin GroEL
YP_001642222.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
YP_001642223.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: mlo:mlr9579 magnesium and cobalt transport protein
YP_001642224.1	PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bch:Bcen2424_6435 multiple antibiotic resistance (MarC)-related proteins
YP_001642225.1	KEGG: noc:Noc_2481 polysaccharide biosynthesis protein
YP_001642226.1	PFAM: FAD linked oxidase domain protein; KEGG: sme:SMc00833 probable glycolate oxidase subunit protein
YP_001642227.1	PFAM: phosphate transporter; KEGG: pfl:PFL_4546 low-affinity inorganic phosphate transporter
YP_001642230.1	KEGG: bbt:BBta_5378 hypothetical protein
YP_001642231.1	in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane
YP_001642232.1	KEGG: nwi:Nwi_1075 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein
YP_001642233.1	MDM; functions in conversion of succinate to propionate
YP_001642235.1	PFAM: protein of unknown function DUF817; KEGG: bra:BRADO1358 hypothetical protein
YP_001642237.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpc:RPC_1127 peptidase S1 and S6, chymotrypsin/Hap
YP_001642238.1	PFAM: heat shock protein DnaJ domain protein; KEGG: rpb:RPB_2392 heat shock protein DnaJ-like
YP_001642239.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; KEGG: rpb:RPB_2393 serine-type D-Ala-D-Ala carboxypeptidase
YP_001642240.1	PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: xau:Xaut_4537 ATP-dependent Clp protease adaptor protein ClpS
YP_001642241.1	KEGG: xau:Xaut_4536 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_001642243.1	catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine
YP_001642244.1	KEGG: hha:Hhal_1628 hypothetical protein
YP_001642245.1	oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis
YP_001642246.1	KEGG: rpc:RPC_1322 hypothetical protein
YP_001642247.1	KEGG: bbt:BBta_6409 hypothetical protein
YP_001642248.1	KEGG: rpa:RPA1549 possible photosynthetic complex assembly protein
YP_001642249.1	TIGRFAM: photosynthetic reaction center H subunit; PFAM: Photosynthetic reaction centre H subunit; KEGG: bbt:BBta_6411 reaction center protein H chain (photosynthetic reaction center H subunit)
YP_001642250.1	PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: bra:BRADO1644 photosynthetic complex (LH1) assembly protein LhaA, major facilitator superfamily (MFS) transporter
YP_001642251.1	catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine
YP_001642252.1	light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production
YP_001642253.1	involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; the enzyme from Rhodobacter capsulatus contains an Fe-S cluster; part of a complex with BchI, BchD, and BchH
YP_001642254.1	light-independent reduction of protochlorophyllide to form chlorophyllide a
YP_001642255.1	light-independent reduction of protochlorophyllide to form chlorophyllide a
YP_001642256.1	PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: bbt:BBta_6418 2-vinyl bacteriochlorophyllide hydratase
YP_001642257.1	KEGG: rpd:RPD_3738 cobalamin B12-binding
YP_001642258.1	KEGG: rru:Rru_A0626 transcriptional regulator, fis family; TIGRFAM: transcriptional regulator PpsR; PFAM: helix-turn-helix Fis-type; PAS fold domain protein; SMART: PAS domain containing protein
YP_001642259.1	TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: rru:Rru_A0627 bacteriochlorophyll/chlorophyll synthetase
YP_001642260.1	PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rpe:RPE_1337 PucC protein
YP_001642261.1	TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: rpd:RPD_3745 geranylgeranyl reductase
YP_001642262.1	PFAM: TspO/MBR family protein; KEGG: mpt:Mpe_A2778 tryptophan-rich sensory protein
YP_001642263.1	KEGG: rru:Rru_A0630 hypothetical protein
YP_001642264.1	PFAM: cytochrome c class I; KEGG: pnu:Pnuc_0555 cytochrome c, class I
YP_001642265.1	similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate
YP_001642266.1	TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: rpc:RPC_3673 6-phosphogluconolactonase
YP_001642267.1	KEGG: sco:SCO7123 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
YP_001642268.1	responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA
YP_001642269.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpd:RPD_2078 MotA/TolQ/ExbB proton channel
YP_001642270.1	PFAM: OmpA/MotB domain protein; KEGG: bja:blr3801 probable chemotaxis protein
YP_001642271.1	PFAM: SCP-like extracellular; KEGG: bja:blr1486 hypothetical protein
YP_001642272.1	PFAM: MscS Mechanosensitive ion channel; KEGG: xau:Xaut_2094 MscS mechanosensitive ion channel
YP_001642273.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: rru:Rru_A3733 HNH endonuclease
YP_001642274.1	PFAM: porin; KEGG: rpa:RPA4315 hypothetical protein
YP_001642275.1	PFAM: porin opacity type; porin; KEGG: nwi:Nwi_2971 hypothetical protein
YP_001642276.1	KEGG: rpa:RPA4316 hypothetical protein
YP_001642277.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YP_001642278.1	PFAM: protein of unknown function DUF81; KEGG: bpe:BP2176 putative inner membrane protein
YP_001642279.1	KEGG: xau:Xaut_3083 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001642280.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: xau:Xaut_3082 tRNA(Ile)-lysidine synthetase
YP_001642281.1	TIGRFAM: tol-pal system protein YbgF; KEGG: bja:bll7148 hypothetical protein
YP_001642282.1	TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: rpb:RPB_1815 OmpA/MotB
YP_001642284.1	PFAM: response regulator receiver; KEGG: ppu:PP_2354 sensory box histidine kinase/response regulator
YP_001642285.1	KEGG: bte:BTH_I2812 hypothetical protein
YP_001642286.1	PFAM: GSCFA domain protein; KEGG: swi:Swit_3997 GSCFA
YP_001642287.1	KEGG: rru:Rru_A3568 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase
YP_001642288.1	KEGG: reh:H16_A0784 gamma-glutamyltransferase 2; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_001642289.1	PFAM: polysaccharide deacetylase; KEGG: vei:Veis_3554 hypothetical protein
YP_001642290.1	PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_2083 inner-membrane translocator ABC transporter
YP_001642291.1	PFAM: inner-membrane translocator; KEGG: rpb:RPB_2082 inner-membrane translocator
YP_001642292.1	PFAM: Extracellular ligand-binding receptor; KEGG: rpb:RPB_2081 twin-arginine translocation pathway signal
YP_001642293.1	KEGG: rpb:RPB_2080 hypothetical protein
YP_001642294.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rpb:RPB_2079 transcriptional regulator, GntR family
YP_001642298.1	PFAM: helix-turn-helix domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: nca:Noca_1313 PAS sensor protein
YP_001642300.1	PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_4631 D-galactonate transporter
YP_001642301.1	PFAM: protein of unknown function DUF892; KEGG: rpb:RPB_3832 protein of unknown function DUF892
YP_001642302.1	PFAM: protein of unknown function UPF0061; KEGG: rpe:RPE_3277 protein of unknown function UPF0061
YP_001642303.1	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: xau:Xaut_1488 acetolactate synthase, large subunit, biosynthetic type
YP_001642304.1	KEGG: bxe:Bxe_A3033 hypothetical protein
YP_001642305.1	TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: rpc:RPC_3253 acetolactate synthase, small subunit
YP_001642306.1	PFAM: Glutathione S-transferase domain; KEGG: bbt:BBta_0613 putative glutathione S-transferase
YP_001642307.1	KEGG: bra:BRADO0860 asparagine synthetase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase family amidotransferase; PFAM: glutamine amidotransferase class-II; asparagine synthase
YP_001642308.1	PFAM: glutamine amidotransferase class-II; KEGG: bbt:BBta_7207 putative glutamine amidotransferase, class-II
YP_001642309.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mes:Meso_3107 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001642310.1	KEGG: gka:GK1520 hypothetical protein
YP_001642312.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: rru:Rru_A0664 signal transduction histidine kinase
YP_001642313.1	PFAM: response regulator receiver; KEGG: mlo:mlr5738 two-component response regulator
YP_001642314.1	KEGG: bra:BRADO2089 putative sensor histidine kinase with multiple PAS domains; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; MHYT domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein
YP_001642315.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bra:BRADO3435 putative transcriptional regulatory protein, Crp/Fnr family
YP_001642316.1	KEGG: bbt:BBta_2788 two component transcriptional regulatory protein, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; response regulator receiver; GAF domain protein; Sigma-70 region 4 type 2; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001642317.1	PFAM: PAS fold-3 domain protein; KEGG: ccr:CC_0836 sensor histidine kinase, putative
YP_001642322.1	PFAM: DNA polymerase beta domain protein region
YP_001642324.1	PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: mlo:mlr9024 resolvase / integrase
YP_001642325.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: psb:Psyr_3124 TonB-dependent siderophore receptor
YP_001642326.1	PFAM: Dual specificity protein phosphatase; ADP-ribosylation/Crystallin J1; SMART: Protein-tyrosine phosphatase, catalytic; KEGG: nar:Saro_0259 ADP-ribosyl-(dinitrogen reductase) hydrolase
YP_001642327.1	TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: cth:Cthe_1986 phage / plasmid primase, P4 family
YP_001642328.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: ret:RHE_CH00241 putative recombinase protein, phage integrase family
YP_001642329.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase