-- dump date 20140619_144446 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 419610000001 SEQ_END SEQ_END NC_010172.1 5471154 5471154 DR NC_010172.1; contig end 5471154..5471154 Methylobacterium extorquens PA1 YP_001637501.1 CDS dnaA NC_010172.1 44 1549 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 44..1549 Methylobacterium extorquens PA1 5835869 YP_001637502.1 CDS Mext_0002 NC_010172.1 1870 2991 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1870..2991 Methylobacterium extorquens PA1 5831313 YP_001637503.1 CDS Mext_0003 NC_010172.1 3032 4186 D KEGG: rpb:RPB_0004 DNA replication and repair protein RecF; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; SMART: AAA ATPase; DNA replication and repair protein RecF 3032..4186 Methylobacterium extorquens PA1 5831314 YP_001637504.1 CDS Mext_0004 NC_010172.1 4190 4594 R PFAM: PilT protein domain protein; KEGG: xau:Xaut_4793 PilT protein domain protein; PilT domain-containing protein complement(4190..4594) Methylobacterium extorquens PA1 5831315 YP_001637505.1 CDS Mext_0005 NC_010172.1 4594 4833 R PFAM: Rv0623 family protein transcription factor; KEGG: acr:Acry_3269 Rv0623 family protein transcription factor; transcription factor complement(4594..4833) Methylobacterium extorquens PA1 5831316 YP_001637506.1 CDS Mext_0006 NC_010172.1 4936 6783 D KEGG: rru:Rru_A0089 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; ATP-dependent DNA helicase RecQ 4936..6783 Methylobacterium extorquens PA1 5831599 YP_001637507.1 CDS Mext_0007 NC_010172.1 6841 7179 R hypothetical protein complement(6841..7179) Methylobacterium extorquens PA1 5831600 YP_001637508.1 CDS Mext_0008 NC_010172.1 7495 8181 D hypothetical protein 7495..8181 Methylobacterium extorquens PA1 5831601 YP_001637509.1 CDS Mext_0009 NC_010172.1 8303 10504 D KEGG: acr:Acry_3541 helicase, RecD/TraA family; TIGRFAM: helicase, RecD/TraA family; SMART: Helix-hairpin-helix DNA-binding class 1; AAA ATPase; recombinase D 8303..10504 Methylobacterium extorquens PA1 5831196 YP_001637510.1 CDS Mext_0010 NC_010172.1 10657 11832 D KEGG: nwi:Nwi_1822 hypothetical protein; hypothetical protein 10657..11832 Methylobacterium extorquens PA1 5831197 YP_001637511.1 CDS Mext_0011 NC_010172.1 12023 14248 D KEGG: bra:BRADO2785 phosphoribosylformylglycinamidine synthase II (FGAM synthase II); TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; phosphoribosylformylglycinamidine synthase II 12023..14248 Methylobacterium extorquens PA1 5831198 YP_001637512.1 CDS Mext_0012 NC_010172.1 14276 14512 D PFAM: BolA family protein; KEGG: rpb:RPB_3710 BolA-like protein; BolA family protein 14276..14512 Methylobacterium extorquens PA1 5831199 YP_001637513.1 CDS Mext_0013 NC_010172.1 14586 14921 D TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: ret:RHE_CH02304 glutaredoxin protein; glutaredoxin-like protein 14586..14921 Methylobacterium extorquens PA1 5831339 YP_001637514.1 CDS Mext_0014 NC_010172.1 14994 15896 D PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pna:Pnap_4563 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 14994..15896 Methylobacterium extorquens PA1 5831340 YP_001637515.1 CDS Mext_0015 NC_010172.1 16005 16889 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: mes:Meso_3700 SMP-30/gluconolaconase/LRE-like region; SMP-30/gluconolaconase/LRE domain-containing protein 16005..16889 Methylobacterium extorquens PA1 5831341 YP_001637516.1 CDS Mext_0016 NC_010172.1 17075 17290 D hypothetical protein 17075..17290 Methylobacterium extorquens PA1 5831342 YP_001637517.1 CDS Mext_0017 NC_010172.1 17318 18154 R KEGG: rpa:RPA1577 hypothetical protein; hypothetical protein complement(17318..18154) Methylobacterium extorquens PA1 5833153 YP_001637518.1 CDS Mext_0018 NC_010172.1 18512 20557 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: pst:PSPTO_2717 sensory box histidine kinase/response regulator; ATPase domain-containing protein complement(18512..20557) Methylobacterium extorquens PA1 5833154 YP_001637519.1 CDS Mext_0019 NC_010172.1 20557 22119 R KEGG: bxe:Bxe_B2609 hypothetical protein; PFAM: Circadian clock protein KaiC central region; KaiA binding; SMART: AAA ATPase; non-specific serine/threonine protein kinase complement(20557..22119) Methylobacterium extorquens PA1 5833155 YP_001637520.1 CDS Mext_0020 NC_010172.1 22475 23674 D KEGG: bxe:Bxe_B2044 hypothetical protein; hypothetical protein 22475..23674 Methylobacterium extorquens PA1 5831663 YP_001637521.1 CDS Mext_0021 NC_010172.1 23704 24702 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pla:Plav_3507 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(23704..24702) Methylobacterium extorquens PA1 5831664 YP_001637522.1 CDS Mext_0022 NC_010172.1 24825 25511 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rle:RL2913 putative GntR family transcriptional regulator; GntR family transcriptional regulator complement(24825..25511) Methylobacterium extorquens PA1 5831665 YP_001637523.1 CDS Mext_0024 NC_010172.1 26161 27807 D TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: bur:Bcep18194_A4412 hypothetical protein; malonate decarboxylase subunit alpha 26161..27807 Methylobacterium extorquens PA1 5831282 YP_001637524.1 CDS Mext_0025 NC_010172.1 27815 28123 D acyl carrier protein of malonate decarboxylase; malonate decarboxylase subunit delta 27815..28123 Methylobacterium extorquens PA1 5831283 YP_001637525.1 CDS Mext_0026 NC_010172.1 28126 29058 D The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta 28126..29058 Methylobacterium extorquens PA1 5831284 YP_001637526.1 CDS Mext_0027 NC_010172.1 29045 29761 D TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: bte:BTH_I2800 malonate decarboxylase, gamma subunit; malonate decarboxylase subunit gamma 29045..29761 Methylobacterium extorquens PA1 5832187 YP_001637527.1 CDS Mext_0028 NC_010172.1 29754 30410 D KEGG: bch:Bcen2424_1273 hypothetical protein; hypothetical protein 29754..30410 Methylobacterium extorquens PA1 5832188 YP_001637528.1 CDS Mext_0029 NC_010172.1 30407 31267 D KEGG: bam:Bamb_1152 triphosphoribosyl-dephospho-CoA synthase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; PFAM: triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA synthase MdcB 30407..31267 Methylobacterium extorquens PA1 5832189 YP_001637529.1 CDS Mext_0030 NC_010172.1 31264 32187 D KEGG: bte:BTH_I2797 acyl transferase domain protein; acyl transferase domain-containing protein 31264..32187 Methylobacterium extorquens PA1 5832190 YP_001637530.1 CDS Mext_0031 NC_010172.1 32325 34709 R TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: aav:Aave_4150 general secretion pathway protein D; general secretion pathway protein D complement(32325..34709) Methylobacterium extorquens PA1 5832928 YP_001637531.1 CDS Mext_0032 NC_010172.1 34769 35206 R PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator; ROSMUCR transcriptional regulator complement(34769..35206) Methylobacterium extorquens PA1 5832929 YP_001637532.1 CDS Mext_0033 NC_010172.1 35503 35946 R hypothetical protein complement(35503..35946) Methylobacterium extorquens PA1 5832930 YP_001637533.1 CDS Mext_0034 NC_010172.1 36123 37223 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pmy:Pmen_4447 helix-turn-helix-domain containing protein, AraC type; helix-turn-helix domain-containing protein 36123..37223 Methylobacterium extorquens PA1 5832931 YP_001637534.1 CDS Mext_0035 NC_010172.1 37811 38818 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: reh:H16_A1682 D-lactate dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 37811..38818 Methylobacterium extorquens PA1 5831751 YP_001637535.1 CDS Mext_0036 NC_010172.1 38822 41194 D PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: nca:Noca_3421 kojibiose phosphorylase; Kojibiose phosphorylase 38822..41194 Methylobacterium extorquens PA1 5831752 YP_001637536.1 CDS Mext_0037 NC_010172.1 41357 42952 D TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: nha:Nham_0891 YidE/YbjL duplication; YidE/YbjL duplication 41357..42952 Methylobacterium extorquens PA1 5831753 YP_001637537.1 CDS Mext_0038 NC_010172.1 43248 45533 R PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: ana:all1058 putative trehalose/maltose hydrolase; Kojibiose phosphorylase complement(43248..45533) Methylobacterium extorquens PA1 5835558 YP_001637538.1 CDS Mext_0039 NC_010172.1 45526 46254 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: csc:Csac_0438 beta-phosphoglucomutase family hydrolase; HAD family hydrolase complement(45526..46254) Methylobacterium extorquens PA1 5835559 YP_001637539.1 CDS Mext_0040 NC_010172.1 46285 48720 R PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: rle:RL0066 putative xylulose-5-phosphate phosphoketolase; putative phosphoketolase complement(46285..48720) Methylobacterium extorquens PA1 5835560 YP_001637540.1 CDS Mext_0041 NC_010172.1 48862 49362 R KEGG: bja:blr3479 hypothetical protein; hypothetical protein complement(48862..49362) Methylobacterium extorquens PA1 5835561 YP_001637541.1 CDS Mext_0042 NC_010172.1 49557 49808 R hypothetical protein complement(49557..49808) Methylobacterium extorquens PA1 5835742 YP_001637542.1 CDS Mext_0043 NC_010172.1 50049 51131 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pmy:Pmen_0268 helix-turn-helix-domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(50049..51131) Methylobacterium extorquens PA1 5835743 YP_001637543.1 CDS Mext_0044 NC_010172.1 51685 51957 R hypothetical protein complement(51685..51957) Methylobacterium extorquens PA1 5835744 YP_001637544.1 CDS Mext_0045 NC_010172.1 52134 53255 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reh:H16_B1002 transcriptional regulator; helix-turn-helix domain-containing protein complement(52134..53255) Methylobacterium extorquens PA1 5835745 YP_001637545.1 CDS Mext_0046 NC_010172.1 53426 53734 D KEGG: ret:RHE_PD00095 putative insertion sequence transposase protein; hypothetical protein 53426..53734 Methylobacterium extorquens PA1 5834584 YP_001637546.1 CDS Mext_0047 NC_010172.1 53886 54443 D hypothetical protein 53886..54443 Methylobacterium extorquens PA1 5834585 YP_001637547.1 CDS Mext_0048 NC_010172.1 54670 55209 D KEGG: aba:Acid345_1413 hypothetical protein; hypothetical protein 54670..55209 Methylobacterium extorquens PA1 5834586 YP_001637548.1 CDS Mext_0049 NC_010172.1 55414 57084 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: aba:Acid345_4738 sulfate transporter; sulfate transporter complement(55414..57084) Methylobacterium extorquens PA1 5834000 YP_001637549.1 CDS Mext_0050 NC_010172.1 57598 58023 D KEGG: bja:blr3479 hypothetical protein; hypothetical protein 57598..58023 Methylobacterium extorquens PA1 5834001 YP_001637550.1 CDS Mext_0051 NC_010172.1 58205 58726 R PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_0861 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(58205..58726) Methylobacterium extorquens PA1 5834002 YP_001637551.1 CDS Mext_0052 NC_010172.1 59158 60132 D PFAM: phosphate acetyl/butaryl transferase; KEGG: xau:Xaut_3251 phosphate acetyltransferase; phosphate butyryltransferase 59158..60132 Methylobacterium extorquens PA1 5834003 YP_001637552.1 CDS Mext_0053 NC_010172.1 60136 61344 D TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: xau:Xaut_3252 acetate kinase; acetate kinase 60136..61344 Methylobacterium extorquens PA1 5834197 YP_001637553.1 CDS Mext_0054 NC_010172.1 61361 61855 D KEGG: xau:Xaut_2306 hypothetical protein; hypothetical protein 61361..61855 Methylobacterium extorquens PA1 5834198 YP_001637554.1 CDS Mext_0055 NC_010172.1 62921 63733 R PFAM: transposase IS4 family protein; KEGG: acr:Acry_3208 transposase, IS4 family protein; transposase IS4 family protein complement(62921..63733) Methylobacterium extorquens PA1 5834199 YP_001637555.1 CDS Mext_0056 NC_010172.1 63895 64893 R PFAM: alpha/beta hydrolase fold; KEGG: rpe:RPE_3641 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(63895..64893) Methylobacterium extorquens PA1 5834200 YP_001637556.1 CDS Mext_0057 NC_010172.1 65086 65331 R hypothetical protein complement(65086..65331) Methylobacterium extorquens PA1 5832255 YP_001637557.1 CDS Mext_0058 NC_010172.1 65450 66517 R PFAM: peptidase M18 aminopeptidase I; peptidase M20; peptidase M42 family protein; KEGG: gsu:GSU2196 hydrolase, putative; peptidase M42 family protein complement(65450..66517) Methylobacterium extorquens PA1 5832256 YP_001637558.1 CDS Mext_0059 NC_010172.1 68678 69493 R PFAM: inositol monophosphatase; KEGG: stp:Strop_0369 inositol monophosphatase; inositol monophosphatase complement(68678..69493) Methylobacterium extorquens PA1 5832257 YP_001637559.1 CDS Mext_0060 NC_010172.1 69694 70113 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpe:RPE_1272 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 69694..70113 Methylobacterium extorquens PA1 5833013 YP_001637560.1 CDS Mext_0061 NC_010172.1 70186 71049 D PFAM: alpha/beta hydrolase fold; KEGG: bcl:ABC0759 hypothetical protein; alpha/beta hydrolase fold protein 70186..71049 Methylobacterium extorquens PA1 5833014 YP_001637561.1 CDS Mext_0062 NC_010172.1 71265 71876 D PFAM: isochorismatase hydrolase; KEGG: bja:blr8041 hypothetical protein; isochorismatase hydrolase 71265..71876 Methylobacterium extorquens PA1 5833015 YP_001637562.1 CDS Mext_0063 NC_010172.1 71912 72652 D KEGG: hch:HCH_06523 GDSL-lilke lipase/acylhydrolase family protein; hypothetical protein 71912..72652 Methylobacterium extorquens PA1 5833016 YP_001637563.1 CDS Mext_0064 NC_010172.1 72717 73016 D KEGG: gur:Gura_2209 hypothetical protein; hypothetical protein 72717..73016 Methylobacterium extorquens PA1 5835334 YP_001637564.1 CDS Mext_0065 NC_010172.1 74421 75104 R PFAM: nuclease (SNase domain protein); KEGG: xcb:XC_2149 succinoglycan biosynthesis protein; nuclease complement(74421..75104) Methylobacterium extorquens PA1 5835335 YP_001637565.1 CDS Mext_0066 NC_010172.1 76284 76625 D hypothetical protein 76284..76625 Methylobacterium extorquens PA1 5835336 YP_001637566.1 CDS Mext_0067 NC_010172.1 76972 77427 R hypothetical protein complement(76972..77427) Methylobacterium extorquens PA1 5835337 YP_001637567.1 CDS Mext_0068 NC_010172.1 78700 80124 R TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: xau:Xaut_4392 small GTP-binding protein; GTP-binding proten HflX complement(78700..80124) Methylobacterium extorquens PA1 5835348 YP_001637568.1 CDS Mext_0069 NC_010172.1 80629 80832 R hypothetical protein complement(80629..80832) Methylobacterium extorquens PA1 5834689 YP_001637569.1 CDS Mext_0070 NC_010172.1 81062 81523 R KEGG: sse:Ssed_4245 hypothetical protein; hypothetical protein complement(81062..81523) Methylobacterium extorquens PA1 5834690 YP_001637570.1 CDS Mext_0071 NC_010172.1 82224 82778 D hypothetical protein 82224..82778 Methylobacterium extorquens PA1 5834691 YP_001637571.1 CDS Mext_0072 NC_010172.1 83173 83415 D KEGG: mlo:mlr3136 hypothetical protein; hypothetical protein 83173..83415 Methylobacterium extorquens PA1 5834692 YP_001637572.1 CDS Mext_0073 NC_010172.1 83457 84224 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bra:BRADO3435 putative transcriptional regulatory protein, Crp/Fnr family; cyclic nucleotide-binding protein complement(83457..84224) Methylobacterium extorquens PA1 5834606 YP_001637573.1 CDS Mext_0074 NC_010172.1 84221 84610 R KEGG: rsh:Rsph17029_1334 response regulator receiver protein; response regulator receiver protein complement(84221..84610) Methylobacterium extorquens PA1 5834607 YP_001637574.1 CDS Mext_0075 NC_010172.1 84876 85589 D KEGG: mlo:mlr2110 hypothetical protein; hypothetical protein 84876..85589 Methylobacterium extorquens PA1 5834608 YP_001637575.1 CDS Mext_0076 NC_010172.1 85589 85849 D hypothetical protein 85589..85849 Methylobacterium extorquens PA1 5834609 YP_001637576.1 CDS Mext_0077 NC_010172.1 85897 86175 D hypothetical protein 85897..86175 Methylobacterium extorquens PA1 5834934 YP_001637577.1 CDS Mext_0078 NC_010172.1 86210 86464 R KEGG: mlo:mlr3136 hypothetical protein; hypothetical protein complement(86210..86464) Methylobacterium extorquens PA1 5834935 YP_001637578.1 CDS Mext_0079 NC_010172.1 87032 87292 D hypothetical protein 87032..87292 Methylobacterium extorquens PA1 5834936 YP_001637579.1 CDS Mext_0080 NC_010172.1 88117 88515 R KEGG: mlo:mlr6156 hypothetical protein; hypothetical protein complement(88117..88515) Methylobacterium extorquens PA1 5835762 YP_001637580.1 CDS Mext_0081 NC_010172.1 88725 89294 D PFAM: integrase family protein; KEGG: mag:amb4292 integrase; integrase family protein 88725..89294 Methylobacterium extorquens PA1 5835763 YP_001637581.1 CDS Mext_0082 NC_010172.1 89423 90529 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpa:RPA3511 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 89423..90529 Methylobacterium extorquens PA1 5835764 YP_001637582.1 CDS Mext_0083 NC_010172.1 90667 91758 R PFAM: Sporulation domain protein; Lytic transglycosylase catalytic; KEGG: xau:Xaut_3156 lytic transglycosylase catalytic; lytic transglycosylase complement(90667..91758) Methylobacterium extorquens PA1 5835765 YP_001637583.1 CDS Mext_0084 NC_010172.1 92148 92423 R KEGG: bbt:BBta_4248 hypothetical protein; hypothetical protein complement(92148..92423) Methylobacterium extorquens PA1 5833674 YP_001637584.1 CDS Mext_0085 NC_010172.1 92517 93680 R KEGG: pcr:Pcryo_1614 hypothetical protein; hypothetical protein complement(92517..93680) Methylobacterium extorquens PA1 5833675 YP_001637585.1 CDS Mext_0086 NC_010172.1 93748 93933 D hypothetical protein 93748..93933 Methylobacterium extorquens PA1 5833676 YP_001637586.1 CDS Mext_0087 NC_010172.1 94010 94405 D KEGG: oan:Oant_1526 hypothetical protein; hypothetical protein 94010..94405 Methylobacterium extorquens PA1 5833677 YP_001637587.1 CDS Mext_0088 NC_010172.1 94529 95107 D KEGG: bta:513668 similar to collagen, type XXVII, alpha 1; hypothetical protein 94529..95107 Methylobacterium extorquens PA1 5834971 YP_001637588.1 CDS Mext_0089 NC_010172.1 95151 95393 D KEGG: rpa:RPA1852 putative transcriptional regulator MucR; transcriptional regulator protein-like protein 95151..95393 Methylobacterium extorquens PA1 5834972 YP_001637589.1 CDS Mext_0090 NC_010172.1 95390 95767 D KEGG: ccr:CC_0933 transcriptional regulator; transcriptional regulator protein-like protein 95390..95767 Methylobacterium extorquens PA1 5834973 YP_001637590.1 CDS Mext_0091 NC_010172.1 95764 96468 R PFAM: dienelactone hydrolase; phospholipase/Carboxylesterase; BAAT/Acyl-CoA thioester hydrolase; KEGG: aba:Acid345_1173 dienelactone hydrolase; dienelactone hydrolase complement(95764..96468) Methylobacterium extorquens PA1 5835821 YP_001637591.1 CDS Mext_0092 NC_010172.1 96638 97042 R KEGG: ret:RHE_PB00061 putative cytochrome c class I protein; hypothetical protein complement(96638..97042) Methylobacterium extorquens PA1 5835822 YP_001637592.1 CDS Mext_0093 NC_010172.1 97029 97979 R KEGG: sus:Acid_6905 hypothetical protein; hypothetical protein complement(97029..97979) Methylobacterium extorquens PA1 5835823 YP_001637593.1 CDS Mext_0094 NC_010172.1 98364 99014 R KEGG: smd:Smed_6356 putative cytochrome c oxidase subunit III protein; putative cytochrome c oxidase subunit III protein complement(98364..99014) Methylobacterium extorquens PA1 5835824 YP_001637594.1 CDS Mext_0095 NC_010172.1 99011 100927 R TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; KEGG: smd:Smed_6355 cytochrome c oxidase subunit I type; cytochrome c oxidase subunit I complement(99011..100927) Methylobacterium extorquens PA1 5834685 YP_001637595.1 CDS Mext_0096 NC_010172.1 100924 101928 R TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: smd:Smed_6354 cytochrome c oxidase subunit II; cytochrome c oxidase subunit II complement(100924..101928) Methylobacterium extorquens PA1 5834686 YP_001637596.1 CDS Mext_0097 NC_010172.1 101936 102499 R PFAM: cytochrome c class I; KEGG: smd:Smed_6353 cytochrome c class I; cytochrome c class I complement(101936..102499) Methylobacterium extorquens PA1 5834687 YP_001637597.1 CDS Mext_0098 NC_010172.1 102496 103332 R SMART: extracellular solute-binding protein family 3; KEGG: smd:Smed_6352 extracellular solute-binding protein family 3; extracellular solute-binding protein complement(102496..103332) Methylobacterium extorquens PA1 5834688 YP_001637598.1 CDS Mext_0099 NC_010172.1 103313 105130 R TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: smd:Smed_6351 pyrrolo-quinoline quinone; methanol/ethanol family PQQ-dependent dehydrogenase complement(103313..105130) Methylobacterium extorquens PA1 5834559 YP_001637599.1 CDS Mext_0100 NC_010172.1 105565 105888 D hypothetical protein 105565..105888 Methylobacterium extorquens PA1 5834560 YP_001637600.1 CDS Mext_0101 NC_010172.1 105966 107288 R PFAM: integrase family protein; KEGG: mag:amb3777 hypothetical protein; integrase family protein complement(105966..107288) Methylobacterium extorquens PA1 5834561 YP_001637601.1 CDS Mext_0102 NC_010172.1 107628 108626 R PFAM: alpha/beta hydrolase fold; KEGG: rpe:RPE_3641 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(107628..108626) Methylobacterium extorquens PA1 5832317 YP_001637602.1 CDS Mext_0103 NC_010172.1 108935 109156 D KEGG: dra:DR_1067 hypothetical protein; hypothetical protein 108935..109156 Methylobacterium extorquens PA1 5832318 YP_001637603.1 CDS Mext_0104 NC_010172.1 109706 110512 D PFAM: lipolytic protein G-D-S-L family; KEGG: xcb:XC_1017 lipase/esterase; GDSL family lipase 109706..110512 Methylobacterium extorquens PA1 5832319 YP_001637604.1 CDS Mext_0105 NC_010172.1 110845 111471 D PFAM: SNARE associated Golgi protein; KEGG: mms:mma_2302 DedA family protein; hypothetical protein 110845..111471 Methylobacterium extorquens PA1 5832320 YP_001637605.1 CDS Mext_0106 NC_010172.1 111509 113017 R PFAM: phospholipase D/Transphosphatidylase; KEGG: rha:RHA1_ro05030 possible phospholipase D alpha; phospholipase D/transphosphatidylase complement(111509..113017) Methylobacterium extorquens PA1 5833310 YP_001637606.1 CDS Mext_0107 NC_010172.1 113414 113629 D KEGG: rsq:Rsph17025_3559 hypothetical protein; hypothetical protein 113414..113629 Methylobacterium extorquens PA1 5833311 YP_001637607.1 CDS Mext_0108 NC_010172.1 113859 115721 D KEGG: rpa:RPA2075 putative signal transduction histidine kinase with GAF and PAS/PAC domains; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein 113859..115721 Methylobacterium extorquens PA1 5833312 YP_001637608.1 CDS Mext_0109 NC_010172.1 115718 116080 D PFAM: response regulator receiver; KEGG: rpa:RPA2074 response regulator receiver (CheY-like protein); response regulator receiver 115718..116080 Methylobacterium extorquens PA1 5833313 YP_001637609.1 CDS Mext_0110 NC_010172.1 116695 117162 R KEGG: pla:Plav_0358 signal transduction histidine kinase; hypothetical protein complement(116695..117162) Methylobacterium extorquens PA1 5832274 YP_001637610.1 CDS Mext_0111 NC_010172.1 118719 119402 R PFAM: nuclease (SNase domain protein); KEGG: xcb:XC_2149 succinoglycan biosynthesis protein; nuclease complement(118719..119402) Methylobacterium extorquens PA1 5832275 YP_001637611.1 CDS Mext_0112 NC_010172.1 119435 119584 R hypothetical protein complement(119435..119584) Methylobacterium extorquens PA1 5832276 YP_001637612.1 CDS Mext_0113 NC_010172.1 121179 121661 R TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; PAS fold domain protein; KEGG: aeh:Mlg_1833 PAS/PAC sensor signal transduction histidine kinase; PAS sensor protein complement(121179..121661) Methylobacterium extorquens PA1 5832277 YP_001637613.1 CDS Mext_0114 NC_010172.1 121875 122327 D PFAM: BLUF domain protein; KEGG: tel:tll0078 phototaxis regulatory protein PixD; BLUF domain-containing protein 121875..122327 Methylobacterium extorquens PA1 5835588 YP_001637614.1 CDS Mext_0115 NC_010172.1 122428 122658 D KEGG: gbe:GbCGDNIH1_1778 hypothetical cytosolic protein; hypothetical protein 122428..122658 Methylobacterium extorquens PA1 5835589 YP_001637615.1 CDS Mext_0116 NC_010172.1 122986 123396 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: rpa:RPA1994 hypothetical protein; cupin complement(122986..123396) Methylobacterium extorquens PA1 5835590 YP_001637616.1 CDS Mext_0117 NC_010172.1 123900 124142 R KEGG: rle:pRL120640 hypothetical protein; hypothetical protein complement(123900..124142) Methylobacterium extorquens PA1 5835591 YP_001637617.1 CDS Mext_0118 NC_010172.1 124232 124558 R hypothetical protein complement(124232..124558) Methylobacterium extorquens PA1 5834630 YP_001637618.1 CDS Mext_0119 NC_010172.1 125064 125693 D PFAM: integrase family protein; KEGG: ccr:CC_1766 hypothetical protein; integrase family protein 125064..125693 Methylobacterium extorquens PA1 5834631 YP_001637619.1 CDS Mext_0120 NC_010172.1 125636 126253 R KEGG: rsq:Rsph17025_3557 hypothetical protein; hypothetical protein complement(125636..126253) Methylobacterium extorquens PA1 5834632 YP_001637620.1 CDS Mext_0121 NC_010172.1 126855 128168 R PFAM: major facilitator superfamily MFS_1; KEGG: har:HEAR3278 putative oxalate/formate antiporter; major facilitator transporter complement(126855..128168) Methylobacterium extorquens PA1 5834633 YP_001637621.1 CDS Mext_0122 NC_010172.1 128592 129257 R KEGG: nwi:Nwi_2917 integrase, catalytic region; integrase catalytic subunit complement(128592..129257) Methylobacterium extorquens PA1 5834189 YP_001637622.1 CDS Mext_0123 NC_010172.1 130415 132493 D KEGG: pst:PSPTO_1490 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS sensor protein 130415..132493 Methylobacterium extorquens PA1 5834190 YP_001637623.1 CDS Mext_0124 NC_010172.1 133225 134925 R PFAM: AMP-dependent synthetase and ligase; KEGG: azo:azo1033 long-chain-fatty-acid-CoA ligase; AMP-dependent synthetase and ligase complement(133225..134925) Methylobacterium extorquens PA1 5834191 YP_001637624.1 CDS Mext_0125 NC_010172.1 135015 135866 D PFAM: porin; KEGG: xau:Xaut_2469 porin; porin 135015..135866 Methylobacterium extorquens PA1 5834192 YP_001637625.1 CDS Mext_0126 NC_010172.1 135978 136916 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: acr:Acry_0629 alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase domain-containing protein complement(135978..136916) Methylobacterium extorquens PA1 5834185 YP_001637626.1 CDS Mext_0127 NC_010172.1 137062 137319 D KEGG: gox:GOX2659 transposase; hypothetical protein 137062..137319 Methylobacterium extorquens PA1 5834186 YP_001637627.1 CDS Mext_0129 NC_010172.1 138930 139136 R KEGG: bam:Bamb_2415 hypothetical protein; hypothetical protein complement(138930..139136) Methylobacterium extorquens PA1 5834188 YP_001637628.1 CDS Mext_0130 NC_010172.1 139133 139369 R hypothetical protein complement(139133..139369) Methylobacterium extorquens PA1 5834124 YP_001637629.1 CDS Mext_0131 NC_010172.1 140434 141507 D PFAM: Hemolysin-type calcium-binding region; KEGG: pde:Pden_2124 hemolysin-type calcium-binding region; hemolysin-type calcium-binding protein 140434..141507 Methylobacterium extorquens PA1 5834125 YP_001637630.1 CDS Mext_0132 NC_010172.1 142801 143355 D PFAM: sigma-70 region 2 domain protein; KEGG: mes:Meso_3107 RNA polymerase, sigma-24 subunit, ECF subfamily; sigma-70 region 2 domain-containing protein 142801..143355 Methylobacterium extorquens PA1 5834126 YP_001637631.1 CDS Mext_0133 NC_010172.1 144084 144590 D PFAM: regulatory protein MarR; KEGG: mxa:MXAN_0654 transcriptional regulator, MarR family; regulatory protein MarR 144084..144590 Methylobacterium extorquens PA1 5834127 YP_001637632.1 CDS Mext_0134 NC_010172.1 144709 145473 R hypothetical protein complement(144709..145473) Methylobacterium extorquens PA1 5834011 YP_001637633.1 CDS Mext_0135 NC_010172.1 145592 145960 R TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: syn:slr0423 rare lipoprotein A; rare lipoprotein A complement(145592..145960) Methylobacterium extorquens PA1 5834012 YP_001637634.1 CDS Mext_0136 NC_010172.1 146955 151241 R KEGG: ccr:CC_0655 sensory box/GGDEF family protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; diguanylate cyclase complement(146955..151241) Methylobacterium extorquens PA1 5834013 YP_001637635.1 CDS Mext_0137 NC_010172.1 152043 153254 D KEGG: mlo:mll0948 hypothetical protein; hypothetical protein 152043..153254 Methylobacterium extorquens PA1 5834014 YP_001637636.1 CDS Mext_0138 NC_010172.1 153292 153699 D PFAM: TadE family protein; KEGG: bch:Bcen2424_6780 TadE family protein; TadE family protein 153292..153699 Methylobacterium extorquens PA1 5833993 YP_001637637.1 CDS Mext_0139 NC_010172.1 153975 154280 D hypothetical protein 153975..154280 Methylobacterium extorquens PA1 5833994 YP_001637638.1 CDS Mext_0140 NC_010172.1 155000 155305 R hypothetical protein complement(155000..155305) Methylobacterium extorquens PA1 5833995 YP_001637639.1 CDS Mext_0141 NC_010172.1 155305 157002 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bbt:BBta_2906 putative methyl-accepting chemotaxis protein; chemotaxis sensory transducer protein complement(155305..157002) Methylobacterium extorquens PA1 5833996 YP_001637640.1 CDS Mext_0142 NC_010172.1 157274 157609 R KEGG: net:Neut_1746 integrase, catalytic region; integrase catalytic subunit complement(157274..157609) Methylobacterium extorquens PA1 5835581 YP_001637641.1 CDS Mext_0143 NC_010172.1 157640 157768 R KEGG: sme:SMa1174 hypothetical protein; hypothetical protein complement(157640..157768) Methylobacterium extorquens PA1 5835582 YP_001637642.1 CDS Mext_0144 NC_010172.1 159244 159600 D KEGG: rpd:RPD_3796 response regulator receiver; hypothetical protein 159244..159600 Methylobacterium extorquens PA1 5835583 YP_001637643.1 CDS Mext_0145 NC_010172.1 159907 160248 D hypothetical protein 159907..160248 Methylobacterium extorquens PA1 5835657 YP_001637644.1 CDS Mext_0146 NC_010172.1 160542 160949 R hypothetical protein complement(160542..160949) Methylobacterium extorquens PA1 5835658 YP_001637645.1 CDS Mext_0147 NC_010172.1 160982 161443 R KEGG: sse:Ssed_4245 hypothetical protein; hypothetical protein complement(160982..161443) Methylobacterium extorquens PA1 5835659 YP_001637646.1 CDS Mext_0148 NC_010172.1 162144 162698 D hypothetical protein 162144..162698 Methylobacterium extorquens PA1 5835660 YP_001637647.1 CDS Mext_0150 NC_010172.1 163251 166871 R TIGRFAM: outer membrane adhesin like proteiin; KEGG: dar:Daro_3199 VCBS; outer membrane adhesin-like protein complement(163251..166871) Methylobacterium extorquens PA1 5833768 YP_001637648.1 CDS Mext_0151 NC_010172.1 167643 167858 D KEGG: rsq:Rsph17025_3559 hypothetical protein; hypothetical protein 167643..167858 Methylobacterium extorquens PA1 5833769 YP_001637649.1 CDS Mext_0152 NC_010172.1 167931 168068 D hypothetical protein 167931..168068 Methylobacterium extorquens PA1 5833770 YP_001637650.1 CDS Mext_0153 NC_010172.1 168080 168298 D hypothetical protein 168080..168298 Methylobacterium extorquens PA1 5833407 YP_001637651.1 CDS Mext_0154 NC_010172.1 168920 169324 D PFAM: helix-turn-helix domain protein; KEGG: bhe:BH02210 transcriptional regulator; helix-turn-helix domain-containing protein 168920..169324 Methylobacterium extorquens PA1 5833408 YP_001637652.1 CDS Mext_0155 NC_010172.1 169575 169982 D PFAM: helix-turn-helix domain protein; KEGG: oan:Oant_0753 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein 169575..169982 Methylobacterium extorquens PA1 5833409 YP_001637653.1 CDS Mext_0156 NC_010172.1 170460 170945 R KEGG: mmr:Mmar10_1499 hypothetical protein; hypothetical protein complement(170460..170945) Methylobacterium extorquens PA1 5833410 YP_001637654.1 CDS Mext_0157 NC_010172.1 171034 172107 R KEGG: aga:AgaP_18389 ENSANGP00000020878; hypothetical protein complement(171034..172107) Methylobacterium extorquens PA1 5832380 YP_001637655.1 CDS Mext_0158 NC_010172.1 172104 172496 R hypothetical protein complement(172104..172496) Methylobacterium extorquens PA1 5832381 YP_001637656.1 CDS Mext_0159 NC_010172.1 172493 173047 R KEGG: pen:PSEEN4266 hypothetical protein; hypothetical protein complement(172493..173047) Methylobacterium extorquens PA1 5832382 YP_001637657.1 CDS Mext_0160 NC_010172.1 173056 174585 R KEGG: mag:amb3683 hypothetical protein; hypothetical protein complement(173056..174585) Methylobacterium extorquens PA1 5832383 YP_001637658.1 CDS Mext_0161 NC_010172.1 174686 176377 D hypothetical protein 174686..176377 Methylobacterium extorquens PA1 5831667 YP_001637659.1 CDS Mext_0162 NC_010172.1 176402 176767 R KEGG: mlo:mlr6156 hypothetical protein; hypothetical protein complement(176402..176767) Methylobacterium extorquens PA1 5831668 YP_001637660.1 CDS Mext_0163 NC_010172.1 176990 177559 D PFAM: integrase family protein; KEGG: mag:amb3768 integrase; integrase family protein 176990..177559 Methylobacterium extorquens PA1 5831669 YP_001637661.1 CDS Mext_0164 NC_010172.1 178135 178794 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpa:RPA3511 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 178135..178794 Methylobacterium extorquens PA1 5833170 YP_001637662.1 CDS Mext_0165 NC_010172.1 178932 180023 R PFAM: Sporulation domain protein; Lytic transglycosylase catalytic; KEGG: xau:Xaut_3156 lytic transglycosylase catalytic; lytic transglycosylase complement(178932..180023) Methylobacterium extorquens PA1 5833171 YP_001637663.1 CDS Mext_0166 NC_010172.1 180413 180688 R KEGG: bbt:BBta_4248 hypothetical protein; hypothetical protein complement(180413..180688) Methylobacterium extorquens PA1 5833172 YP_001637664.1 CDS Mext_0167 NC_010172.1 180782 181945 R KEGG: pcr:Pcryo_1614 hypothetical protein; hypothetical protein complement(180782..181945) Methylobacterium extorquens PA1 5833173 YP_001637665.1 CDS Mext_0168 NC_010172.1 182013 182198 D hypothetical protein 182013..182198 Methylobacterium extorquens PA1 5831005 YP_001637666.1 CDS Mext_0169 NC_010172.1 182218 182670 D KEGG: oan:Oant_1526 hypothetical protein; hypothetical protein 182218..182670 Methylobacterium extorquens PA1 5831006 YP_001637667.1 CDS Mext_0170 NC_010172.1 183431 183991 D PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator; ROSMUCR transcriptional regulator 183431..183991 Methylobacterium extorquens PA1 5831007 YP_001637668.1 CDS Mext_0171 NC_010172.1 183988 184692 R PFAM: dienelactone hydrolase; phospholipase/Carboxylesterase; BAAT/Acyl-CoA thioester hydrolase; KEGG: aba:Acid345_1173 dienelactone hydrolase; dienelactone hydrolase complement(183988..184692) Methylobacterium extorquens PA1 5831008 YP_001637669.1 CDS Mext_0172 NC_010172.1 185264 185494 D KEGG: rxy:Rxyl_2437 alpha/beta hydrolase fold; hypothetical protein 185264..185494 Methylobacterium extorquens PA1 5833273 YP_001637670.1 CDS Mext_0173 NC_010172.1 185773 187317 R KEGG: syn:sll1717 hypothetical protein; hypothetical protein complement(185773..187317) Methylobacterium extorquens PA1 5833274 YP_001637671.1 CDS Mext_0174 NC_010172.1 187499 188125 R KEGG: rle:pRL110095 putative transmembrane protein; putative transmembrane protein complement(187499..188125) Methylobacterium extorquens PA1 5833275 YP_001637672.1 CDS Mext_0175 NC_010172.1 188402 189724 R PFAM: integrase family protein; KEGG: mag:amb3777 hypothetical protein; integrase family protein complement(188402..189724) Methylobacterium extorquens PA1 5833276 YP_001637673.1 CDS Mext_0176 NC_010172.1 190109 191401 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(190109..191401) Methylobacterium extorquens PA1 5832007 YP_001637674.1 CDS Mext_0177 NC_010172.1 191473 192120 R PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: xau:Xaut_1692 phosphoribosylanthranilate isomerase; phosphoribosylanthranilate isomerase complement(191473..192120) Methylobacterium extorquens PA1 5832008 YP_001637675.1 CDS Mext_0178 NC_010172.1 192137 192505 R KEGG: xau:Xaut_2218 hypothetical protein; hypothetical protein complement(192137..192505) Methylobacterium extorquens PA1 5832671 YP_001637676.1 CDS Mext_0179 NC_010172.1 192731 193039 R TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: rpb:RPB_0638 integration host factor, beta subunit; integration host factor subunit beta complement(192731..193039) Methylobacterium extorquens PA1 5832672 YP_001637677.1 CDS Mext_0180 NC_010172.1 193081 194046 R TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: rpd:RPD_0193 signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 36K type complement(193081..194046) Methylobacterium extorquens PA1 5832673 YP_001637678.1 CDS Mext_0181 NC_010172.1 194307 195632 R KEGG: swi:Swit_4010 hypothetical protein; hypothetical protein complement(194307..195632) Methylobacterium extorquens PA1 5833114 YP_001637679.1 CDS rpsA NC_010172.1 195725 197437 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(195725..197437) Methylobacterium extorquens PA1 5833115 YP_001637680.1 CDS Mext_0183 NC_010172.1 197852 198658 R TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: rpa:RPA3364 putative rRNA methylase; RNA methyltransferase complement(197852..198658) Methylobacterium extorquens PA1 5833116 YP_001637681.1 CDS Mext_0184 NC_010172.1 199300 200085 R hypothetical protein complement(199300..200085) Methylobacterium extorquens PA1 5833587 YP_001637682.1 CDS Mext_0185 NC_010172.1 200217 201155 D PFAM: Pirin domain protein; KEGG: nha:Nham_0009 pirin-like; pirin domain-containing protein 200217..201155 Methylobacterium extorquens PA1 5833588 YP_001637683.1 CDS Mext_0186 NC_010172.1 201258 203024 D TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: atc:AGR_C_3111 glutathione-regulated potassium-efflux system protein (K(+)/H(+) antiporter); potassium efflux system protein 201258..203024 Methylobacterium extorquens PA1 5833589 YP_001637684.1 CDS Mext_0187 NC_010172.1 203204 203923 D PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: bbt:BBta_3390 putative cytochrome c-type biogenesis protein; cytochrome c biogenesis protein transmembrane protein 203204..203923 Methylobacterium extorquens PA1 5830964 YP_001637685.1 CDS Mext_0188 NC_010172.1 204031 204645 D PFAM: HhH-GPD family protein; KEGG: mmr:Mmar10_1055 HhH-GPD family protein; HhH-GPD family protein 204031..204645 Methylobacterium extorquens PA1 5830965 YP_001637686.1 CDS Mext_0189 NC_010172.1 204651 204908 R hypothetical protein complement(204651..204908) Methylobacterium extorquens PA1 5830966 YP_001637687.1 CDS Mext_0190 NC_010172.1 205236 205454 D hypothetical protein 205236..205454 Methylobacterium extorquens PA1 5830967 YP_001637688.1 CDS Mext_0191 NC_010172.1 205569 207266 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bra:BRADO2559 putative methyl-accepting chemotaxis protein; chemotaxis sensory transducer protein complement(205569..207266) Methylobacterium extorquens PA1 5831128 YP_001637689.1 CDS Mext_0192 NC_010172.1 207649 209271 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_2425 ABC transporter related; ABC transporter-like protein 207649..209271 Methylobacterium extorquens PA1 5831129 YP_001637690.1 CDS Mext_0193 NC_010172.1 209279 209635 R KEGG: sme:SMc00123 hypothetical protein; hypothetical protein complement(209279..209635) Methylobacterium extorquens PA1 5831130 YP_001637691.1 CDS Mext_0194 NC_010172.1 209645 209884 R hypothetical protein complement(209645..209884) Methylobacterium extorquens PA1 5831131 YP_001637692.1 CDS Mext_0195 NC_010172.1 210102 210746 R KEGG: stm:STM4196 putative cytoplasmic protein; hypothetical protein complement(210102..210746) Methylobacterium extorquens PA1 5831685 YP_001637693.1 CDS Mext_0196 NC_010172.1 210757 211392 R KEGG: oan:Oant_0417 hypothetical protein; hypothetical protein complement(210757..211392) Methylobacterium extorquens PA1 5831686 YP_001637694.1 CDS Mext_0197 NC_010172.1 211493 212482 D KEGG: swi:Swit_1135 hypothetical protein; hypothetical protein 211493..212482 Methylobacterium extorquens PA1 5831687 YP_001637695.1 CDS Mext_0198 NC_010172.1 212502 213686 R PFAM: glycosyl transferase group 1; KEGG: fal:FRAAL1901 putative glycosyl transferase; group 1 glycosyl transferase complement(212502..213686) Methylobacterium extorquens PA1 5831688 YP_001637696.1 CDS Mext_0199 NC_010172.1 213686 214726 R PFAM: glycosyl transferase group 1; KEGG: acr:Acry_1363 glycosyl transferase, group 1; group 1 glycosyl transferase complement(213686..214726) Methylobacterium extorquens PA1 5833718 YP_001637697.1 CDS Mext_0200 NC_010172.1 214784 216838 D TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: glycosyl transferase group 1; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: nmu:Nmul_A2267 sucrose-phosphate phosphatase; HAD family hydrolase 214784..216838 Methylobacterium extorquens PA1 5833719 YP_001637698.1 CDS Mext_0201 NC_010172.1 216860 217750 D KEGG: mgi:Mflv_3876 putative sugar transferase; putative sugar transferase 216860..217750 Methylobacterium extorquens PA1 5833720 YP_001637699.1 CDS Mext_0202 NC_010172.1 217798 218946 D KEGG: rba:RB4336 hypothetical protein; hypothetical protein 217798..218946 Methylobacterium extorquens PA1 5831844 YP_001637700.1 CDS Mext_0203 NC_010172.1 218997 219938 D PFAM: glycosyl transferase family 2; KEGG: rba:RB4337 similar to glycosyl transferase; glycosyl transferase family protein 218997..219938 Methylobacterium extorquens PA1 5831845 YP_001637701.1 CDS Mext_0204 NC_010172.1 219935 220990 D PFAM: glycosyl transferase group 1; KEGG: rba:RB4333 probable galactosyltransferase; group 1 glycosyl transferase 219935..220990 Methylobacterium extorquens PA1 5831846 YP_001637702.1 CDS Mext_0205 NC_010172.1 221035 221703 D KEGG: ath:AT1G01180 unknown protein; hypothetical protein 221035..221703 Methylobacterium extorquens PA1 5831847 YP_001637703.1 CDS Mext_0206 NC_010172.1 222390 223499 D PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bja:bll2340 two-component response regulator; metal-dependent phosphohydrolase 222390..223499 Methylobacterium extorquens PA1 5831083 YP_001637704.1 CDS Mext_0207 NC_010172.1 223664 226360 D PFAM: ABC transporter related; KEGG: bxe:Bxe_A0918 excinuclease ABC, A subunit; ABC transporter-like protein 223664..226360 Methylobacterium extorquens PA1 5831084 YP_001637705.1 CDS Mext_0208 NC_010172.1 226402 227358 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bra:BRADO0452 putative bifunctional protein: class I glutamine amidotransferase-like (N-terminal), transcriptional regulator protein AraC/XylS family (C-terminal); ThiJ/PfpI domain-containing protein complement(226402..227358) Methylobacterium extorquens PA1 5831085 YP_001637706.1 CDS Mext_0209 NC_010172.1 227486 228274 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbt:BBta_3264 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 227486..228274 Methylobacterium extorquens PA1 5831086 YP_001637707.1 CDS Mext_0210 NC_010172.1 228467 228913 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: sme:SMa1491 isoquinoline 1-oxidoreductase, alpha subunit; 2Fe-2S iron-sulfur cluster binding domain-containing protein 228467..228913 Methylobacterium extorquens PA1 5832300 YP_001637708.1 CDS Mext_0211 NC_010172.1 228924 231182 D PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bbt:BBta_3261 putative isoquinoline 1-oxidoreductase beta subunit; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 228924..231182 Methylobacterium extorquens PA1 5832301 YP_001637709.1 CDS Mext_0212 NC_010172.1 231193 232200 D PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: cff:CFF8240_0914 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 231193..232200 Methylobacterium extorquens PA1 5832302 YP_001637710.1 CDS Mext_0213 NC_010172.1 232432 233682 D PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bra:BRADO1760 D-3-phosphoglycerate dehydrogenase (PgdH); NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 232432..233682 Methylobacterium extorquens PA1 5832303 YP_001637711.1 CDS Mext_0214 NC_010172.1 233698 235095 D PFAM: FAD linked oxidase domain protein; KEGG: xau:Xaut_1614 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 233698..235095 Methylobacterium extorquens PA1 5831762 YP_001637712.1 CDS Mext_0215 NC_010172.1 235867 236526 D KEGG: nha:Nham_4188 chaperone protein HtpG; chaperone protein HtpG 235867..236526 Methylobacterium extorquens PA1 5831763 YP_001637713.1 CDS Mext_0216 NC_010172.1 236514 239324 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nha:Nham_4187 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin 236514..239324 Methylobacterium extorquens PA1 5831764 YP_001637714.1 CDS Mext_0217 NC_010172.1 239321 240691 D PFAM: Polysulphide reductase NrfD; KEGG: nha:Nham_4186 polysulphide reductase, NrfD; polysulfide reductase NrfD 239321..240691 Methylobacterium extorquens PA1 5831765 YP_001637715.1 CDS Mext_0218 NC_010172.1 240688 241206 D KEGG: nha:Nham_4185 hypothetical protein; hypothetical protein 240688..241206 Methylobacterium extorquens PA1 5833394 YP_001637716.1 CDS Mext_0219 NC_010172.1 241203 241730 D KEGG: nha:Nham_4184 hypothetical protein; hypothetical protein 241203..241730 Methylobacterium extorquens PA1 5833395 YP_001637717.1 CDS Mext_0220 NC_010172.1 241727 242683 D KEGG: nha:Nham_4183 hypothetical protein; hypothetical protein 241727..242683 Methylobacterium extorquens PA1 5833396 YP_001637718.1 CDS Mext_0221 NC_010172.1 242676 243197 D KEGG: nha:Nham_4182 hypothetical protein; hypothetical protein 242676..243197 Methylobacterium extorquens PA1 5831962 YP_001637719.1 CDS Mext_0222 NC_010172.1 243197 244285 D TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; KEGG: nha:Nham_4180 cytochrome c oxidase, subunit II; cytochrome c oxidase subunit II 243197..244285 Methylobacterium extorquens PA1 5831963 YP_001637720.1 CDS Mext_0223 NC_010172.1 244317 246008 D KEGG: nha:Nham_4179 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I 244317..246008 Methylobacterium extorquens PA1 5831964 YP_001637721.1 CDS Mext_0224 NC_010172.1 246005 246694 D PFAM: cytochrome c oxidase subunit III; KEGG: nha:Nham_4178 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 246005..246694 Methylobacterium extorquens PA1 5831965 YP_001637722.1 CDS Mext_0225 NC_010172.1 246691 246993 D TIGRFAM: caa(3)-type oxidase, subunit IV; KEGG: noc:Noc_1247 Caa(3)-type oxidase, subunit IV; caa(3)-type oxidase subunit IV 246691..246993 Methylobacterium extorquens PA1 5832194 YP_001637723.1 CDS Mext_0226 NC_010172.1 247134 247484 R KEGG: bbt:BBta_p0210 putative insertion element protein; hypothetical protein complement(247134..247484) Methylobacterium extorquens PA1 5832195 YP_001637724.1 CDS Mext_0227 NC_010172.1 247508 247792 R hypothetical protein complement(247508..247792) Methylobacterium extorquens PA1 5832196 YP_001637725.1 CDS Mext_0228 NC_010172.1 248069 248590 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bja:bll6484 ECF sigma factor; sigma-70 family RNA polymerase sigma factor 248069..248590 Methylobacterium extorquens PA1 5832197 YP_001637726.1 CDS Mext_0229 NC_010172.1 248593 249360 D KEGG: bja:bll6483 hypothetical protein; hypothetical protein 248593..249360 Methylobacterium extorquens PA1 5831689 YP_001637727.1 CDS Mext_0230 NC_010172.1 249407 250480 D PFAM: Catalase domain protein; KEGG: bxe:Bxe_B1668 putative catalase; catalase domain-containing protein 249407..250480 Methylobacterium extorquens PA1 5831690 YP_001637728.1 CDS Mext_0231 NC_010172.1 250477 251043 D PFAM: cytochrome B561; KEGG: xcb:XC_3994 cytochrome b561; cytochrome B561 250477..251043 Methylobacterium extorquens PA1 5831691 YP_001637729.1 CDS Mext_0233 NC_010172.1 251640 253355 D catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 251640..253355 Methylobacterium extorquens PA1 5832691 YP_001637730.1 CDS Mext_0234 NC_010172.1 253602 255692 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: xau:Xaut_3238 K+-transporting ATPase, B subunit; K+-transporting ATPase subunit B 253602..255692 Methylobacterium extorquens PA1 5832692 YP_001637731.1 CDS Mext_0235 NC_010172.1 255716 256321 D one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C 255716..256321 Methylobacterium extorquens PA1 5832693 YP_001637732.1 CDS Mext_0236 NC_010172.1 256332 259049 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: bbt:BBta_6335 sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation; osmosensitive K channel His kinase sensor 256332..259049 Methylobacterium extorquens PA1 5832694 YP_001637733.1 CDS Mext_0237 NC_010172.1 259046 259792 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpd:RPD_0666 response regulator receiver; response regulator receiver 259046..259792 Methylobacterium extorquens PA1 5833292 YP_001637734.1 CDS Mext_0238 NC_010172.1 260040 260291 R KEGG: gbe:GbCGDNIH1_1600 hypothetical protein; hypothetical protein complement(260040..260291) Methylobacterium extorquens PA1 5833293 YP_001637735.1 CDS Mext_0239 NC_010172.1 260483 261844 D KEGG: rpc:RPC_2525 TRAP transporter solute receptor, TAXI family; TRAP-type transport system periplasmic component-like protein 260483..261844 Methylobacterium extorquens PA1 5833294 YP_001637736.1 CDS Mext_0240 NC_010172.1 262145 263083 R KEGG: smd:Smed_3881 hypothetical protein; hypothetical protein complement(262145..263083) Methylobacterium extorquens PA1 5831797 YP_001637737.1 CDS Mext_0241 NC_010172.1 263080 263868 R PFAM: methyltransferase putative; Methyltransferase type 11; Methyltransferase type 12; KEGG: bra:BRADO2072 putative 3-demethylubiquinone-9 3-O-methyltransferase; type 11 methyltransferase complement(263080..263868) Methylobacterium extorquens PA1 5831798 YP_001637738.1 CDS Mext_0242 NC_010172.1 263865 264650 R PFAM: Phosphoglycerate mutase; KEGG: sme:SMb20250 hypothetical protein; phosphoglycerate mutase complement(263865..264650) Methylobacterium extorquens PA1 5831799 YP_001637739.1 CDS Mext_0243 NC_010172.1 264647 265744 R PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: sme:SMb20249 myo-inositol-1-phosphate synthase; myo-inositol-1-phosphate synthase complement(264647..265744) Methylobacterium extorquens PA1 5831800 YP_001637740.1 CDS Mext_0244 NC_010172.1 265744 266784 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mes:Meso_2774 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(265744..266784) Methylobacterium extorquens PA1 5832531 YP_001637741.1 CDS Mext_0245 NC_010172.1 266811 267911 R KEGG: ade:Adeh_1058 hypothetical protein; hypothetical protein complement(266811..267911) Methylobacterium extorquens PA1 5832532 YP_001637742.1 CDS Mext_0246 NC_010172.1 267908 269014 R KEGG: smd:Smed_3891 hypothetical protein; hypothetical protein complement(267908..269014) Methylobacterium extorquens PA1 5832533 YP_001637743.1 CDS Mext_0247 NC_010172.1 269011 270138 R KEGG: rsh:Rsph17029_2169 hypothetical protein; hypothetical protein complement(269011..270138) Methylobacterium extorquens PA1 5832534 YP_001637744.1 CDS Mext_0248 NC_010172.1 270135 271241 R PFAM: glycosyl transferase group 1; KEGG: rsh:Rsph17029_2170 glycosyl transferase, group 1; group 1 glycosyl transferase complement(270135..271241) Methylobacterium extorquens PA1 5832621 YP_001637745.1 CDS Mext_0249 NC_010172.1 271232 272527 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bra:BRADO2067 putative Fe-S oxidoreductase homolog to magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase; radical SAM domain-containing protein complement(271232..272527) Methylobacterium extorquens PA1 5832622 YP_001637746.1 CDS Mext_0250 NC_010172.1 272524 273615 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rsp:RSP_0519 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(272524..273615) Methylobacterium extorquens PA1 5832623 YP_001637747.1 CDS Mext_0251 NC_010172.1 273612 274724 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: ade:Adeh_1060 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(273612..274724) Methylobacterium extorquens PA1 5832624 YP_001637748.1 CDS Mext_0253 NC_010172.1 277465 278703 D PFAM: integrase family protein; KEGG: sil:SPO1927 site-specfic recombinase, phage integrase family; integrase family protein 277465..278703 Methylobacterium extorquens PA1 5833085 YP_001637749.1 CDS Mext_0254 NC_010172.1 278713 279735 D hypothetical protein 278713..279735 Methylobacterium extorquens PA1 5833086 YP_001637750.1 CDS Mext_0255 NC_010172.1 279856 280089 D PFAM: Prophage CP4-57 regulatory; KEGG: xcv:XCV2219 hypothetical protein; prophage CP4-57 regulatory 279856..280089 Methylobacterium extorquens PA1 5833087 YP_001637751.1 CDS Mext_0256 NC_010172.1 280092 281069 D hypothetical protein 280092..281069 Methylobacterium extorquens PA1 5832733 YP_001637752.1 CDS Mext_0257 NC_010172.1 281179 282921 D KEGG: noc:Noc_2244 protein of unknown function DUF927; superfamily II helicase 281179..282921 Methylobacterium extorquens PA1 5832734 YP_001637753.1 CDS Mext_0258 NC_010172.1 283044 283619 D hypothetical protein 283044..283619 Methylobacterium extorquens PA1 5832735 YP_001637754.1 CDS Mext_0259 NC_010172.1 283764 284069 D hypothetical protein 283764..284069 Methylobacterium extorquens PA1 5833341 YP_001637755.1 CDS Mext_0260 NC_010172.1 284472 284981 R KEGG: sru:SRU_0545 hypothetical protein; hypothetical protein complement(284472..284981) Methylobacterium extorquens PA1 5833342 YP_001637756.1 CDS Mext_0261 NC_010172.1 285505 286128 D KEGG: xau:Xaut_2240 hypothetical protein; hypothetical protein 285505..286128 Methylobacterium extorquens PA1 5833343 YP_001637757.1 CDS Mext_0262 NC_010172.1 286133 286546 D KEGG: mag:amb3705 hypothetical protein; hypothetical protein 286133..286546 Methylobacterium extorquens PA1 5833344 YP_001637758.1 CDS Mext_0263 NC_010172.1 286773 287015 D hypothetical protein 286773..287015 Methylobacterium extorquens PA1 5831207 YP_001637759.1 CDS Mext_0264 NC_010172.1 287514 289130 R PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: rle:RL1925 hypothetical protein; hypothetical protein complement(287514..289130) Methylobacterium extorquens PA1 5831208 YP_001637760.1 CDS Mext_0265 NC_010172.1 289506 290237 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: atc:AGR_pAT_642 hypothetical protein; short-chain dehydrogenase/reductase SDR complement(289506..290237) Methylobacterium extorquens PA1 5831209 YP_001637761.1 CDS Mext_0266 NC_010172.1 290320 290712 D PFAM: helix-turn-helix HxlR type; KEGG: atc:AGR_pAT_641 hypothetical protein; helix-turn-helix HxlR type protein 290320..290712 Methylobacterium extorquens PA1 5831210 YP_001637762.1 CDS Mext_0267 NC_010172.1 290846 291325 R hypothetical protein complement(290846..291325) Methylobacterium extorquens PA1 5831098 YP_001637763.1 CDS Mext_0268 NC_010172.1 291402 291947 R PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: mlo:mlr9024 resolvase / integrase; resolvase domain-containing protein complement(291402..291947) Methylobacterium extorquens PA1 5831099 YP_001637764.1 CDS Mext_0269 NC_010172.1 292075 292944 R PFAM: Sel1 domain protein repeat-containing protein; KEGG: eba:ebA355 hypothetical protein; Sel1 domain-containing protein complement(292075..292944) Methylobacterium extorquens PA1 5831100 YP_001637765.1 CDS Mext_0270 NC_010172.1 294155 294985 D hypothetical protein 294155..294985 Methylobacterium extorquens PA1 5831101 YP_001637766.1 CDS Mext_0271 NC_010172.1 294982 295788 R KEGG: pde:Pden_1523 putative restriction endonuclease; putative restriction endonuclease complement(294982..295788) Methylobacterium extorquens PA1 5833583 YP_001637767.1 CDS Mext_0272 NC_010172.1 295790 299758 R KEGG: nar:Saro_0354 putative type II DNA modification enzyme; putative type II DNA modification enzyme complement(295790..299758) Methylobacterium extorquens PA1 5833584 YP_001637768.1 CDS Mext_0273 NC_010172.1 299758 302517 R PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases; KEGG: pde:Pden_1526 helicase domain protein; helicase domain-containing protein complement(299758..302517) Methylobacterium extorquens PA1 5833585 YP_001637769.1 CDS Mext_0274 NC_010172.1 302514 307778 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; KEGG: gox:GOX1503 probable ATP-dependent helicase Lhr; DEAD/DEAH box helicase complement(302514..307778) Methylobacterium extorquens PA1 5833586 YP_001637770.1 CDS Mext_0275 NC_010172.1 308527 309840 D PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bra:BRADO4634 putative polynucleotide enzyme with nucleotide triphosphate hydrolase domain; recombination factor protein RarA 308527..309840 Methylobacterium extorquens PA1 5832437 YP_001637771.1 CDS Mext_0276 NC_010172.1 309876 311369 D PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: xau:Xaut_4189 carboxypeptidase Taq; carboxypeptidase Taq 309876..311369 Methylobacterium extorquens PA1 5833047 YP_001637772.1 CDS Mext_0277 NC_010172.1 311466 312779 D KEGG: rpe:RPE_0414 molecular chaperone, HSP70 class; molecular chaperone, HSP70 class 311466..312779 Methylobacterium extorquens PA1 5833048 YP_001637773.1 CDS Mext_0278 NC_010172.1 313007 314413 D KEGG: rpb:RPB_2335 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 313007..314413 Methylobacterium extorquens PA1 5833049 YP_001637774.1 CDS Mext_0279 NC_010172.1 314497 314919 D hypothetical protein 314497..314919 Methylobacterium extorquens PA1 5833050 YP_001637775.1 CDS Mext_0280 NC_010172.1 315058 315759 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: xau:Xaut_4762 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase 315058..315759 Methylobacterium extorquens PA1 5832597 YP_001637776.1 CDS Mext_0281 NC_010172.1 315820 316623 D PFAM: ATP12 ATPase; KEGG: rpa:RPA3207 hypothetical protein; ATP12 ATPase 315820..316623 Methylobacterium extorquens PA1 5832598 YP_001637777.1 CDS Mext_0282 NC_010172.1 317218 318750 D PFAM: carboxyl transferase; KEGG: xau:Xaut_4725 carboxyl transferase; carboxyl transferase 317218..318750 Methylobacterium extorquens PA1 5832599 YP_001637778.1 CDS Mext_0283 NC_010172.1 318812 319366 R hypothetical protein complement(318812..319366) Methylobacterium extorquens PA1 5832600 YP_001637779.1 CDS Mext_0284 NC_010172.1 319803 320450 D PFAM: regulatory protein TetR; KEGG: mlo:mll1406 probable transcriptional regulator; regulatory protein TetR 319803..320450 Methylobacterium extorquens PA1 5831950 YP_001637780.1 CDS Mext_0285 NC_010172.1 320484 321503 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 320484..321503 Methylobacterium extorquens PA1 5831951 YP_001637781.1 CDS Mext_0286 NC_010172.1 321671 322324 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mpt:Mpe_A3061 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 321671..322324 Methylobacterium extorquens PA1 5832171 YP_001637782.1 CDS Mext_0287 NC_010172.1 322436 323260 D KEGG: syw:SYNW2410 hypothetical protein; hypothetical protein 322436..323260 Methylobacterium extorquens PA1 5832172 YP_001637783.1 CDS Mext_0288 NC_010172.1 323333 324631 R TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: xau:Xaut_1195 crotonyl-CoA reductase; crotonyl-CoA reductase complement(323333..324631) Methylobacterium extorquens PA1 5832173 YP_001637784.1 CDS Mext_0289 NC_010172.1 324812 326284 R PFAM: Catalase domain protein; KEGG: rba:RB4376 catalase; catalase complement(324812..326284) Methylobacterium extorquens PA1 5832174 YP_001637785.1 CDS Mext_0290 NC_010172.1 326651 328717 D KEGG: xau:Xaut_1197 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; methylmalonyl-CoA mutase large subunit 326651..328717 Methylobacterium extorquens PA1 5832327 YP_001637786.1 CDS Mext_0291 NC_010172.1 328827 329513 R KEGG: mfa:Mfla_1093 hypothetical protein; hypothetical protein complement(328827..329513) Methylobacterium extorquens PA1 5832328 YP_001637787.1 CDS Mext_0292 NC_010172.1 329810 330598 R PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: rle:RL1193 putative short-chain reductase; short-chain dehydrogenase/reductase SDR complement(329810..330598) Methylobacterium extorquens PA1 5832329 YP_001637788.1 CDS Mext_0293 NC_010172.1 330665 330994 D SMART: regulatory protein ArsR; KEGG: ret:RHE_CH01046 probable transcriptional regulator protein, ArsR family; regulatory protein ArsR 330665..330994 Methylobacterium extorquens PA1 5832330 YP_001637789.1 CDS Mext_0294 NC_010172.1 331146 332207 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 331146..332207 Methylobacterium extorquens PA1 5832454 YP_001637790.1 CDS Mext_0295 NC_010172.1 332221 332394 R hypothetical protein complement(332221..332394) Methylobacterium extorquens PA1 5832455 YP_001637791.1 CDS leuD NC_010172.1 332554 333159 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 332554..333159 Methylobacterium extorquens PA1 5832456 YP_001637792.1 CDS Mext_0297 NC_010172.1 333167 333784 R PFAM: peptidase C15 pyroglutamyl peptidase I; KEGG: rpc:RPC_1753 peptidase C15, pyroglutamyl peptidase I; peptidase C15 pyroglutamyl peptidase I complement(333167..333784) Methylobacterium extorquens PA1 5832736 YP_001637793.1 CDS Mext_0298 NC_010172.1 333781 334821 R functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase complement(333781..334821) Methylobacterium extorquens PA1 5832737 YP_001637794.1 CDS Mext_0299 NC_010172.1 334917 335951 D PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: bja:blr7980 hypothetical protein; hypothetical protein 334917..335951 Methylobacterium extorquens PA1 5832738 YP_001637795.1 CDS Mext_0300 NC_010172.1 336137 336484 D KEGG: rle:RL4008 hypothetical protein; hypothetical protein 336137..336484 Methylobacterium extorquens PA1 5832739 YP_001637796.1 CDS Mext_0301 NC_010172.1 336562 338442 R PFAM: peptidase S15; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: acr:Acry_0766 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase complement(336562..338442) Methylobacterium extorquens PA1 5832613 YP_001637797.1 CDS Mext_0302 NC_010172.1 338511 339428 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mlo:mll7632 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(338511..339428) Methylobacterium extorquens PA1 5832614 YP_001637798.1 CDS Mext_0303 NC_010172.1 339770 340024 D hypothetical protein 339770..340024 Methylobacterium extorquens PA1 5832615 YP_001637799.1 CDS Mext_0304 NC_010172.1 340156 341403 D TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: bja:bll1921 exonuclease subunit SbcD homolog; nuclease SbcCD subunit D 340156..341403 Methylobacterium extorquens PA1 5832616 YP_001637800.1 CDS Mext_0305 NC_010172.1 341415 345161 D PFAM: SMC domain protein; KEGG: ade:Adeh_0433 exonuclease SbcC; SMC domain-containing protein 341415..345161 Methylobacterium extorquens PA1 5832049 YP_001637801.1 CDS Mext_0306 NC_010172.1 345364 346683 D PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_3273 major facilitator superfamily MFS_1; major facilitator transporter 345364..346683 Methylobacterium extorquens PA1 5832050 YP_001637802.1 CDS Mext_0307 NC_010172.1 346765 347532 R KEGG: bme:BMEI0183 competence protein F; competence protein F complement(346765..347532) Methylobacterium extorquens PA1 5832051 YP_001637803.1 CDS Mext_0308 NC_010172.1 347562 347789 R KEGG: bja:bll8048 hypothetical protein; hypothetical protein complement(347562..347789) Methylobacterium extorquens PA1 5832052 YP_001637804.1 CDS Mext_0309 NC_010172.1 347993 348886 D PFAM: Methyltransferase type 11; KEGG: xau:Xaut_3105 methyltransferase type 11; type 11 methyltransferase 347993..348886 Methylobacterium extorquens PA1 5833478 YP_001637805.1 CDS Mext_0310 NC_010172.1 348883 349239 D PFAM: protein of unknown function DUF427; KEGG: bur:Bcep18194_B2068 protein of unknown function DUF427; hypothetical protein 348883..349239 Methylobacterium extorquens PA1 5833479 YP_001637806.1 CDS Mext_0311 NC_010172.1 349248 350789 R KEGG: pde:Pden_3092 hypothetical protein; hypothetical protein complement(349248..350789) Methylobacterium extorquens PA1 5833480 YP_001637807.1 CDS Mext_0312 NC_010172.1 350821 351237 R TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: xau:Xaut_2586 NUDIX hydrolase; mutator MutT protein complement(350821..351237) Methylobacterium extorquens PA1 5833481 YP_001637808.1 CDS Mext_0313 NC_010172.1 351234 351956 R PFAM: protein of unknown function DUF541; KEGG: mes:Meso_2073 protein of unknown function DUF541; hypothetical protein complement(351234..351956) Methylobacterium extorquens PA1 5831052 YP_001637809.1 CDS Mext_0314 NC_010172.1 351953 353197 R KEGG: rpd:RPD_0111 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ complement(351953..353197) Methylobacterium extorquens PA1 5831053 YP_001637810.1 CDS Mext_0315 NC_010172.1 353579 354049 D KEGG: rpa:RPA0494 sensor histidine kinase with PAS/PAC and response regulator receiver domains; sensor histidine kinase 353579..354049 Methylobacterium extorquens PA1 5831054 YP_001637811.1 CDS Mext_0316 NC_010172.1 354142 354696 D PFAM: glutathione peroxidase; KEGG: bra:BRADO3371 putative glutathione peroxidase; glutathione peroxidase 354142..354696 Methylobacterium extorquens PA1 5832687 YP_001637812.1 CDS Mext_0317 NC_010172.1 354943 355266 D hypothetical protein 354943..355266 Methylobacterium extorquens PA1 5832688 YP_001637813.1 CDS Mext_0318 NC_010172.1 355457 355699 D KEGG: rpc:RPC_2151 hypothetical protein; hypothetical protein 355457..355699 Methylobacterium extorquens PA1 5832689 YP_001637814.1 CDS Mext_0319 NC_010172.1 355706 358813 R proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(355706..358813) Methylobacterium extorquens PA1 5832690 YP_001637815.1 CDS Mext_0320 NC_010172.1 358901 362428 R KEGG: mes:Meso_1984 AsmA; hypothetical protein complement(358901..362428) Methylobacterium extorquens PA1 5831930 YP_001637816.1 CDS Mext_0321 NC_010172.1 362589 362840 R hypothetical protein complement(362589..362840) Methylobacterium extorquens PA1 5831931 YP_001637817.1 CDS Mext_0322 NC_010172.1 362956 365343 D PFAM: UvrD/REP helicase; KEGG: rpb:RPB_2023 UvrD/REP helicase; UvrD/REP helicase 362956..365343 Methylobacterium extorquens PA1 5831932 YP_001637818.1 CDS Mext_0323 NC_010172.1 365740 366456 D PFAM: PhoH family protein; KEGG: ent:Ent638_1548 PhoH family protein; PhoH family protein 365740..366456 Methylobacterium extorquens PA1 5831933 YP_001637819.1 CDS Mext_0324 NC_010172.1 366527 367267 R TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: ppr:PBPRA1295 putative aquaporin Z; MIP family channel protein complement(366527..367267) Methylobacterium extorquens PA1 5833632 YP_001637820.1 CDS Mext_0325 NC_010172.1 367638 368531 R PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: rpc:RPC_3293 exonuclease; exonuclease RNase T and DNA polymerase III complement(367638..368531) Methylobacterium extorquens PA1 5833633 YP_001637821.1 CDS Mext_0326 NC_010172.1 368582 371545 R PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: pla:Plav_0946 (glutamate--ammonia-ligase) adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase complement(368582..371545) Methylobacterium extorquens PA1 5833634 YP_001637822.1 CDS Mext_0327 NC_010172.1 371787 372551 R KEGG: mlo:mlr0494 hypothetical protein; hypothetical protein complement(371787..372551) Methylobacterium extorquens PA1 5833635 YP_001637823.1 CDS Mext_0328 NC_010172.1 373127 374557 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpb:RPB_3441 periplasmic sensor signal transduction histidine kinase; ATPase domain-containing protein complement(373127..374557) Methylobacterium extorquens PA1 5833831 YP_001637824.1 CDS Mext_0329 NC_010172.1 374554 375252 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpd:RPD_2012 response regulator receiver; response regulator receiver complement(374554..375252) Methylobacterium extorquens PA1 5833832 YP_001637825.1 CDS Mext_0330 NC_010172.1 375279 375788 R PFAM: OsmC family protein; KEGG: mes:Meso_0693 OsmC-like protein; OsmC family protein complement(375279..375788) Methylobacterium extorquens PA1 5833833 YP_001637826.1 CDS Mext_0331 NC_010172.1 375865 376644 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO0533 putative sulfonate ABC transporter, ATP binding protein (SsuB/TauB/YcbE-like); ABC transporter-like protein complement(375865..376644) Methylobacterium extorquens PA1 5833834 YP_001637827.1 CDS Mext_0332 NC_010172.1 376652 377491 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_7646 putative sulfonate ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein complement(376652..377491) Methylobacterium extorquens PA1 5833572 YP_001637828.1 CDS Mext_0333 NC_010172.1 377552 378184 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pen:PSEEN2025 transporter, LysE family; lysine exporter protein LysE/YggA complement(377552..378184) Methylobacterium extorquens PA1 5833573 YP_001637829.1 CDS Mext_0334 NC_010172.1 378193 379167 R TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: bra:BRADO0531 putative sulfonate ABC transporter, periplasmic binding protein (SsuA/YcbO-like); aliphatic sulfonate ABC transporter substrate-binding protein complement(378193..379167) Methylobacterium extorquens PA1 5833574 YP_001637830.1 CDS Mext_0335 NC_010172.1 379327 382113 D catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 379327..382113 Methylobacterium extorquens PA1 5831704 YP_001637831.1 CDS Mext_0336 NC_010172.1 382205 382813 D PFAM: GrpE protein; KEGG: mlo:mll3220 heat shock protein (HSP-70 COFACTOR), grpE; ribulose-phosphate 3-epimerase 382205..382813 Methylobacterium extorquens PA1 5831705 YP_001637832.1 CDS Mext_0337 NC_010172.1 382921 383238 R KEGG: rsp:RSP_2764 hypothetical protein; hypothetical protein complement(382921..383238) Methylobacterium extorquens PA1 5831706 YP_001637833.1 CDS Mext_0338 NC_010172.1 383228 383503 R PFAM: protein of unknown function DUF497; KEGG: oan:Oant_1533 protein of unknown function DUF497; hypothetical protein complement(383228..383503) Methylobacterium extorquens PA1 5831707 YP_001637834.1 CDS Mext_0339 NC_010172.1 383595 384452 R PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: nca:Noca_0170 prephenate dehydratase; prephenate dehydratase complement(383595..384452) Methylobacterium extorquens PA1 5832527 YP_001637835.1 CDS Mext_0340 NC_010172.1 384469 385212 R KEGG: rpe:RPE_3769 3-deoxy-D-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase complement(384469..385212) Methylobacterium extorquens PA1 5832528 YP_001637836.1 CDS Mext_0341 NC_010172.1 385520 386437 D PFAM: cytochrome c class I; KEGG: mlo:mll5495 cytochrome c; cytochrome c class I 385520..386437 Methylobacterium extorquens PA1 5832529 YP_001637837.1 CDS Mext_0342 NC_010172.1 386610 388523 D PFAM: extracellular solute-binding protein family 5; KEGG: nha:Nham_0378 extracellular solute-binding protein, family 5; extracellular solute-binding protein 386610..388523 Methylobacterium extorquens PA1 5832530 YP_001637838.1 CDS Mext_0343 NC_010172.1 388520 390394 D PFAM: extracellular solute-binding protein family 5; KEGG: rpe:RPE_3766 extracellular solute-binding protein, family 5; extracellular solute-binding protein 388520..390394 Methylobacterium extorquens PA1 5832886 YP_001637839.1 CDS Mext_0344 NC_010172.1 390404 391501 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_0013 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 390404..391501 Methylobacterium extorquens PA1 5832887 YP_001637840.1 CDS Mext_0345 NC_010172.1 391522 392073 D PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA4388 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 391522..392073 Methylobacterium extorquens PA1 5832888 YP_001637841.1 CDS Mext_0346 NC_010172.1 392187 393719 D PFAM: AMP-dependent synthetase and ligase; KEGG: pla:Plav_3087 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 392187..393719 Methylobacterium extorquens PA1 5832889 YP_001637842.1 CDS Mext_0347 NC_010172.1 393780 394562 D PFAM: glycosyl transferase family 2; KEGG: rpr:RP218 putative glycosyl transferase; glycosyl transferase family protein 393780..394562 Methylobacterium extorquens PA1 5832660 YP_001637843.1 CDS Mext_0348 NC_010172.1 394798 396705 D PFAM: integrase family protein; KEGG: rpb:RPB_3046 phage integrase; integrase family protein 394798..396705 Methylobacterium extorquens PA1 5832662 YP_001637844.1 CDS Mext_0349 NC_010172.1 397030 398124 R PFAM: flagellin domain protein; KEGG: smd:Smed_0268 flagellin domain protein; flagellin domain-containing protein complement(397030..398124) Methylobacterium extorquens PA1 5832109 YP_001637845.1 CDS Mext_0352 NC_010172.1 400171 401100 D PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_3446 ISHne3, transposase; transposase IS116/IS110/IS902 family protein 400171..401100 Methylobacterium extorquens PA1 5835843 YP_001637846.1 CDS Mext_0353 NC_010172.1 401448 402047 D KEGG: ecw:EcE24377A_2232 conserved hypothetical protein TIGR02594; hypothetical protein 401448..402047 Methylobacterium extorquens PA1 5835844 YP_001637847.1 CDS Mext_0354 NC_010172.1 402106 402867 D hypothetical protein 402106..402867 Methylobacterium extorquens PA1 5835845 YP_001637848.1 CDS Mext_0355 NC_010172.1 402938 403081 D hypothetical protein 402938..403081 Methylobacterium extorquens PA1 5835846 YP_001637849.1 CDS Mext_0356 NC_010172.1 403091 403501 D KEGG: xau:Xaut_3728 hypothetical protein; hypothetical protein 403091..403501 Methylobacterium extorquens PA1 5835018 YP_001637850.1 CDS Mext_0357 NC_010172.1 403467 403859 D hypothetical protein 403467..403859 Methylobacterium extorquens PA1 5835019 YP_001637851.1 CDS Mext_0358 NC_010172.1 404320 405831 D PFAM: Hemolysin-type calcium-binding region; KEGG: ana:alr7304 similar to hlyA; hemolysin-type calcium-binding protein 404320..405831 Methylobacterium extorquens PA1 5835020 YP_001637852.1 CDS Mext_0359 NC_010172.1 406060 406302 R hypothetical protein complement(406060..406302) Methylobacterium extorquens PA1 5835021 YP_001637853.1 CDS Mext_0360 NC_010172.1 406305 406559 R KEGG: rle:RL3520 hypothetical protein; hypothetical protein complement(406305..406559) Methylobacterium extorquens PA1 5835746 YP_001637854.1 CDS Mext_0361 NC_010172.1 406700 407155 D PFAM: peptidase S24 and S26 domain protein; KEGG: pmc:P9515_10191 putative SOS mutagenesis protein UmuD; peptidase S24/S26 domain-containing protein 406700..407155 Methylobacterium extorquens PA1 5835747 YP_001637855.1 CDS Mext_0362 NC_010172.1 407420 407803 D KEGG: mpt:Mpe_B0052 DNA-directed DNA polymerase; DNA-directed DNA polymerase 407420..407803 Methylobacterium extorquens PA1 5835748 YP_001637856.1 CDS Mext_0363 NC_010172.1 408475 409311 D TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-4 domain protein; KEGG: pap:PSPA7_0636 transcriptional regulator, LuxR family; PAS sensor protein 408475..409311 Methylobacterium extorquens PA1 5835749 YP_001637857.1 CDS Mext_0364 NC_010172.1 409588 409962 D PFAM: CsbD family protein; KEGG: bja:blr1496 hypothetical protein; CsbD family protein 409588..409962 Methylobacterium extorquens PA1 5834304 YP_001637858.1 CDS Mext_0365 NC_010172.1 410006 410917 D KEGG: smd:Smed_5683 conserved hypothetical membrane spanning protein; hypothetical protein 410006..410917 Methylobacterium extorquens PA1 5834305 YP_001637859.1 CDS Mext_0366 NC_010172.1 411008 411211 D PFAM: CsbD family protein; KEGG: pen:PSEEN4005 hypothetical protein; CsbD family protein 411008..411211 Methylobacterium extorquens PA1 5834306 YP_001637860.1 CDS Mext_0367 NC_010172.1 411286 411669 D PFAM: CsbD family protein; KEGG: acr:Acry_2107 CsbD family protein; CsbD family protein 411286..411669 Methylobacterium extorquens PA1 5834307 YP_001637861.1 CDS Mext_0368 NC_010172.1 411890 412810 R PFAM: protein of unknown function UPF0187; KEGG: pen:PSEEN4044 hypothetical protein; hypothetical protein complement(411890..412810) Methylobacterium extorquens PA1 5835653 YP_001637862.1 CDS Mext_0369 NC_010172.1 412821 413996 R TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pla:Plav_0407 acetylornithine deacetylase (ArgE); acetylornithine deacetylase complement(412821..413996) Methylobacterium extorquens PA1 5835654 YP_001637863.1 CDS apaG NC_010172.1 413993 414385 R protein associated with Co2+ and Mg2+ efflux; ApaG protein complement(413993..414385) Methylobacterium extorquens PA1 5835655 YP_001637864.1 CDS Mext_0371 NC_010172.1 414553 415002 D hypothetical protein 414553..415002 Methylobacterium extorquens PA1 5835656 YP_001637865.1 CDS Mext_0372 NC_010172.1 414999 416117 D Catalyzes the deamination of dCTP to form dUTP; 2'-deoxycytidine 5'-triphosphate deaminase 414999..416117 Methylobacterium extorquens PA1 5835646 YP_001637866.1 CDS Mext_0373 NC_010172.1 416164 417051 R KEGG: bra:BRADO1703 putative transport protein, YfdC-like; putative transport protein, YfdC-like protein complement(416164..417051) Methylobacterium extorquens PA1 5835647 YP_001637867.1 CDS Mext_0374 NC_010172.1 417163 417900 R PFAM: molybdopterin binding domain; KEGG: xau:Xaut_3541 molybdopterin binding domain; molybdopterin binding domain-containing protein complement(417163..417900) Methylobacterium extorquens PA1 5835648 YP_001637868.1 CDS Mext_0375 NC_010172.1 417984 418730 D PFAM: sugar fermentation stimulation protein; KEGG: xau:Xaut_3100 sugar fermentation stimulation protein; sugar fermentation stimulation protein 417984..418730 Methylobacterium extorquens PA1 5835577 YP_001637869.1 CDS Mext_0376 NC_010172.1 418687 419667 R TIGRFAM: methyltransferase FkbM family; KEGG: bbt:BBta_0234 hypothetical protein; FkbM family methyltransferase complement(418687..419667) Methylobacterium extorquens PA1 5835578 YP_001637870.1 CDS Mext_0377 NC_010172.1 419672 420448 D PFAM: alpha/beta hydrolase fold; KEGG: xau:Xaut_3209 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 419672..420448 Methylobacterium extorquens PA1 5835579 YP_001637871.1 CDS Mext_0378 NC_010172.1 420587 421051 D hypothetical protein 420587..421051 Methylobacterium extorquens PA1 5835580 YP_001637872.1 CDS Mext_0379 NC_010172.1 421076 421855 R PFAM: ABC-2 type transporter; KEGG: mpt:Mpe_A0977 ABC transporter permease protein; ABC-2 type transporter complement(421076..421855) Methylobacterium extorquens PA1 5835610 YP_001637873.1 CDS Mext_0380 NC_010172.1 421852 422778 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr6579 ABC transporter ATP-binding protein; ABC transporter-like protein complement(421852..422778) Methylobacterium extorquens PA1 5835611 YP_001637874.1 CDS Mext_0381 NC_010172.1 422995 425034 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mes:Meso_2441 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin complement(422995..425034) Methylobacterium extorquens PA1 5835612 YP_001637875.1 CDS Mext_0382 NC_010172.1 425175 425933 D KEGG: smd:Smed_5498 hypothetical protein; hypothetical protein 425175..425933 Methylobacterium extorquens PA1 5835613 YP_001637876.1 CDS Mext_0383 NC_010172.1 425930 426496 D KEGG: mes:Meso_2443 hypothetical protein; hypothetical protein 425930..426496 Methylobacterium extorquens PA1 5835598 YP_001637877.1 CDS Mext_0384 NC_010172.1 426493 427503 D KEGG: mes:Meso_2444 hypothetical protein; hypothetical protein 426493..427503 Methylobacterium extorquens PA1 5835599 YP_001637878.1 CDS Mext_0385 NC_010172.1 427512 428030 D KEGG: mes:Meso_2445 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein A 427512..428030 Methylobacterium extorquens PA1 5835600 YP_001637879.1 CDS Mext_0386 NC_010172.1 428027 428737 D KEGG: mes:Meso_2446 hypothetical protein; hypothetical protein 428027..428737 Methylobacterium extorquens PA1 5835601 YP_001637880.1 CDS Mext_0387 NC_010172.1 428825 429460 D PFAM: cytoplasmic chaperone TorD family protein; KEGG: mes:Meso_2447 cytoplasmic chaperone TorD; cytoplasmic chaperone TorD family protein 428825..429460 Methylobacterium extorquens PA1 5835632 YP_001637881.1 CDS Mext_0388 NC_010172.1 429537 429782 D TIGRFAM: formate dehydrogenase region TAT target; KEGG: mes:Meso_2448 twin-arginine translocation pathway signal; formate dehydrogenase region TAT target 429537..429782 Methylobacterium extorquens PA1 5835633 YP_001637882.1 CDS Mext_0389 NC_010172.1 429790 432732 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mes:Meso_2449 twin-arginine translocation pathway signal; molybdopterin oxidoreductase 429790..432732 Methylobacterium extorquens PA1 5835634 YP_001637883.1 CDS Mext_0390 NC_010172.1 432750 433346 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bja:bll5476 formate dehydrogenase iron-sulfur subunit; 4Fe-4S ferredoxin 432750..433346 Methylobacterium extorquens PA1 5835635 YP_001637884.1 CDS Mext_0391 NC_010172.1 433415 434452 D TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: mes:Meso_2451 formate dehydrogenase, gamma subunit; formate dehydrogenase subunit gamma 433415..434452 Methylobacterium extorquens PA1 5834673 YP_001637885.1 CDS Mext_0392 NC_010172.1 434548 434787 D hypothetical protein 434548..434787 Methylobacterium extorquens PA1 5834674 YP_001637886.1 CDS Mext_0393 NC_010172.1 434832 435449 D KEGG: smd:Smed_5488 hypothetical protein; hypothetical protein 434832..435449 Methylobacterium extorquens PA1 5834675 YP_001637887.1 CDS Mext_0394 NC_010172.1 435488 436081 R KEGG: vvy:VVA1400 hypothetical protein; hypothetical protein complement(435488..436081) Methylobacterium extorquens PA1 5832060 YP_001637888.1 CDS Mext_0395 NC_010172.1 436711 437346 D PFAM: regulatory protein TetR; KEGG: azo:azo0243 putative TetR family transcriptional regulator; regulatory protein TetR 436711..437346 Methylobacterium extorquens PA1 5832061 YP_001637889.1 CDS Mext_0396 NC_010172.1 437343 438584 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xau:Xaut_1149 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 437343..438584 Methylobacterium extorquens PA1 5832062 YP_001637890.1 CDS Mext_0397 NC_010172.1 438633 441728 D PFAM: acriflavin resistance protein; KEGG: xau:Xaut_1148 acriflavin resistance protein; acriflavin resistance protein 438633..441728 Methylobacterium extorquens PA1 5832063 YP_001637891.1 CDS Mext_0398 NC_010172.1 441873 442832 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: atc:AGR_C_3767 hypothetical protein; hypothetical protein complement(441873..442832) Methylobacterium extorquens PA1 5834038 YP_001637892.1 CDS hrcA NC_010172.1 443063 444154 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(443063..444154) Methylobacterium extorquens PA1 5834039 YP_001637893.1 CDS Mext_0400 NC_010172.1 444408 444695 D KEGG: rpb:RPB_0345 hypothetical protein; hypothetical protein 444408..444695 Methylobacterium extorquens PA1 5834040 YP_001637894.1 CDS rph NC_010172.1 444860 445573 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 444860..445573 Methylobacterium extorquens PA1 5834041 YP_001637895.1 CDS Mext_0402 NC_010172.1 445570 446205 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 445570..446205 Methylobacterium extorquens PA1 5834201 YP_001637896.1 CDS Mext_0403 NC_010172.1 446416 447633 D KEGG: nha:Nham_0149 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 446416..447633 Methylobacterium extorquens PA1 5834202 YP_001637897.1 CDS Mext_0404 NC_010172.1 447638 448849 R KEGG: rpc:RPC_0322 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(447638..448849) Methylobacterium extorquens PA1 5834203 YP_001637898.1 CDS Mext_0405 NC_010172.1 448970 449920 D PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: xau:Xaut_0340 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 448970..449920 Methylobacterium extorquens PA1 5834204 YP_001637899.1 CDS Mext_0406 NC_010172.1 449904 450290 D PFAM: protein of unknown function UPF0102; KEGG: rpd:RPD_0400 protein of unknown function UPF0102; hypothetical protein 449904..450290 Methylobacterium extorquens PA1 5834666 YP_001637900.1 CDS Mext_0407 NC_010172.1 450320 450712 R PFAM: response regulator receiver; KEGG: ccr:CC_3015 response regulator; response regulator receiver complement(450320..450712) Methylobacterium extorquens PA1 5834667 YP_001637901.1 CDS Mext_0408 NC_010172.1 450912 451916 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pmy:Pmen_3115 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein 450912..451916 Methylobacterium extorquens PA1 5834668 YP_001637902.1 CDS Mext_0409 NC_010172.1 451913 453055 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A2384 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 451913..453055 Methylobacterium extorquens PA1 5834669 YP_001637903.1 CDS Mext_0410 NC_010172.1 453052 453780 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: esa:ESA_01111 hypothetical protein; binding-protein-dependent transport system inner membrane protein 453052..453780 Methylobacterium extorquens PA1 5834822 YP_001637904.1 CDS Mext_0411 NC_010172.1 453787 454896 R PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_1255 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein complement(453787..454896) Methylobacterium extorquens PA1 5834823 YP_001637905.1 CDS Mext_0412 NC_010172.1 455003 455920 R PFAM: Extensin family protein; KEGG: atc:AGR_C_4159 hypothetical protein; extensin family protein complement(455003..455920) Methylobacterium extorquens PA1 5834824 YP_001637906.1 CDS Mext_0413 NC_010172.1 456119 458218 D PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: rpa:RPA0872 putative peptidyl-dipeptidase; peptidyl-dipeptidase Dcp 456119..458218 Methylobacterium extorquens PA1 5834825 YP_001637907.1 CDS Mext_0414 NC_010172.1 458330 460003 R PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: gbe:GbCGDNIH1_0047 formate--tetrahydrofolate ligase; formate--tetrahydrofolate ligase complement(458330..460003) Methylobacterium extorquens PA1 5832652 YP_001637908.1 CDS Mext_0415 NC_010172.1 460242 460463 R PFAM: Heavy metal transport/detoxification protein; KEGG: vei:Veis_1021 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein complement(460242..460463) Methylobacterium extorquens PA1 5832653 YP_001637909.1 CDS Mext_0416 NC_010172.1 460699 462228 D PFAM: EAL domain protein; KEGG: bja:blr7477 hypothetical protein; EAL domain-containing protein 460699..462228 Methylobacterium extorquens PA1 5832654 YP_001637910.1 CDS Mext_0417 NC_010172.1 462263 462490 R hypothetical protein complement(462263..462490) Methylobacterium extorquens PA1 5835847 YP_001637911.1 CDS Mext_0418 NC_010172.1 462661 463197 R KEGG: mmr:Mmar10_0609 chemotaxis protein; chemotaxis protein complement(462661..463197) Methylobacterium extorquens PA1 5835848 YP_001637912.1 CDS Mext_0419 NC_010172.1 463381 463764 R PFAM: response regulator receiver; KEGG: bja:bll7479 two-component response regulator; response regulator receiver complement(463381..463764) Methylobacterium extorquens PA1 5835849 YP_001637913.1 CDS Mext_0420 NC_010172.1 464017 465084 D TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: rpd:RPD_4040 riboflavin biosynthesis protein RibF; riboflavin biosynthesis protein RibF 464017..465084 Methylobacterium extorquens PA1 5835850 YP_001637914.1 CDS Mext_0421 NC_010172.1 465264 466268 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: xau:Xaut_4126 glyoxylate reductase; glyoxylate reductase complement(465264..466268) Methylobacterium extorquens PA1 5834030 YP_001637915.1 CDS Mext_0422 NC_010172.1 466595 467188 D PFAM: protein of unknown function DUF1058; KEGG: xau:Xaut_4125 protein of unknown function DUF1058; hypothetical protein 466595..467188 Methylobacterium extorquens PA1 5834031 YP_001637916.1 CDS Mext_0423 NC_010172.1 467293 467793 R PFAM: ferric-uptake regulator; KEGG: xau:Xaut_3845 ferric uptake regulator, Fur family; ferric-uptake regulator complement(467293..467793) Methylobacterium extorquens PA1 5834032 YP_001637917.1 CDS Mext_0424 NC_010172.1 468070 468609 D catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 468070..468609 Methylobacterium extorquens PA1 5834033 YP_001637918.1 CDS Mext_0425 NC_010172.1 468770 469996 D FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 468770..469996 Methylobacterium extorquens PA1 5834240 YP_001637919.1 CDS Mext_0426 NC_010172.1 470424 471299 D KEGG: xau:Xaut_0052 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 470424..471299 Methylobacterium extorquens PA1 5834241 YP_001637920.1 CDS Mext_0427 NC_010172.1 471367 472128 D KEGG: nha:Nham_1390 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP 471367..472128 Methylobacterium extorquens PA1 5834242 YP_001637921.1 CDS Mext_0428 NC_010172.1 472185 472586 D PFAM: DoxX family protein; KEGG: mes:Meso_0934 DoxX; DoxX family protein 472185..472586 Methylobacterium extorquens PA1 5834243 YP_001637922.1 CDS Mext_0429 NC_010172.1 472590 475940 R KEGG: nwi:Nwi_1127 tetratricopeptide TPR_4 protein; hypothetical protein complement(472590..475940) Methylobacterium extorquens PA1 5835171 YP_001637923.1 CDS Mext_0430 NC_010172.1 476056 476487 R hypothetical protein complement(476056..476487) Methylobacterium extorquens PA1 5835172 YP_001637924.1 CDS Mext_0431 NC_010172.1 476641 478788 R PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: rpa:RPA1570 putative aminopeptidase; oligopeptidase B complement(476641..478788) Methylobacterium extorquens PA1 5835173 YP_001637925.1 CDS Mext_0432 NC_010172.1 479217 479654 D PFAM: ROSMUCR transcriptional regulator; KEGG: rpc:RPC_1774 transcriptional regulator, MucR family; ROSMUCR transcriptional regulator 479217..479654 Methylobacterium extorquens PA1 5835174 YP_001637926.1 CDS Mext_0433 NC_010172.1 479727 479999 D hypothetical protein 479727..479999 Methylobacterium extorquens PA1 5831063 YP_001637927.1 CDS Mext_0434 NC_010172.1 480108 480950 D KEGG: rpe:RPE_1869 hypothetical protein; hypothetical protein 480108..480950 Methylobacterium extorquens PA1 5831064 YP_001637928.1 CDS Mext_0435 NC_010172.1 480989 481417 R PFAM: Fe-S metabolism associated SufE; KEGG: bja:bll3069 hypothetical protein; Fe-S metabolism associated SufE complement(480989..481417) Methylobacterium extorquens PA1 5831065 YP_001637929.1 CDS Mext_0436 NC_010172.1 481506 482585 R KEGG: dvu:DVU0449 sensor/response regulator; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein; PAS sensor protein complement(481506..482585) Methylobacterium extorquens PA1 5831066 YP_001637930.1 CDS Mext_0437 NC_010172.1 482738 486415 R KEGG: nha:Nham_0235 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein complement(482738..486415) Methylobacterium extorquens PA1 5830986 YP_001637931.1 CDS Mext_0438 NC_010172.1 487093 487602 D KEGG: pla:Plav_0358 signal transduction histidine kinase; hypothetical protein 487093..487602 Methylobacterium extorquens PA1 5830987 YP_001637932.1 CDS Mext_0439 NC_010172.1 487717 487881 D hypothetical protein 487717..487881 Methylobacterium extorquens PA1 5830988 YP_001637933.1 CDS Mext_0440 NC_010172.1 487928 488368 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: csa:Csal_0685 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(487928..488368) Methylobacterium extorquens PA1 5830989 YP_001637934.1 CDS Mext_0441 NC_010172.1 488513 488848 R KEGG: bbt:BBta_p0210 putative insertion element protein; putative insertion element protein complement(488513..488848) Methylobacterium extorquens PA1 5832396 YP_001637935.1 CDS Mext_0442 NC_010172.1 488956 489237 R PFAM: transposase IS3/IS911 family protein; KEGG: bbt:BBta_p0209 putative transposase IS3/IS911 family; transposase IS3/IS911 family protein complement(488956..489237) Methylobacterium extorquens PA1 5832397 YP_001637936.1 CDS Mext_0443 NC_010172.1 489465 489716 D KEGG: nwi:Nwi_2918 integrase, catalytic region; integrase catalytic subunit 489465..489716 Methylobacterium extorquens PA1 5832398 YP_001637937.1 CDS Mext_0444 NC_010172.1 489721 489927 R hypothetical protein complement(489721..489927) Methylobacterium extorquens PA1 5832399 YP_001637938.1 CDS Mext_0445 NC_010172.1 490384 490974 R PFAM: protein of unknown function DUF1003; KEGG: swi:Swit_4796 protein of unknown function DUF1003; hypothetical protein complement(490384..490974) Methylobacterium extorquens PA1 5832202 YP_001637939.1 CDS Mext_0446 NC_010172.1 490974 491261 D hypothetical protein 490974..491261 Methylobacterium extorquens PA1 5832203 YP_001637940.1 CDS Mext_0448 NC_010172.1 492064 492360 D KEGG: ecw:EcE24377A_2232 conserved hypothetical protein TIGR02594; hypothetical protein 492064..492360 Methylobacterium extorquens PA1 5832205 YP_001637941.1 CDS Mext_0449 NC_010172.1 492660 492989 D hypothetical protein 492660..492989 Methylobacterium extorquens PA1 5832876 YP_001637942.1 CDS Mext_0450 NC_010172.1 493066 493833 R hypothetical protein complement(493066..493833) Methylobacterium extorquens PA1 5832877 YP_001637943.1 CDS Mext_0451 NC_010172.1 493948 494142 R TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: syn:slr0423 rare lipoprotein A; rare lipoprotein A complement(493948..494142) Methylobacterium extorquens PA1 5832878 YP_001637944.1 CDS Mext_0452 NC_010172.1 494427 495263 D PFAM: protein of unknown function DUF1236; KEGG: mmu:100041170 similar to loricrin; hypothetical protein 494427..495263 Methylobacterium extorquens PA1 5832879 YP_001637945.1 CDS Mext_0453 NC_010172.1 495312 495713 D hypothetical protein 495312..495713 Methylobacterium extorquens PA1 5833058 YP_001637946.1 CDS Mext_0454 NC_010172.1 495919 496143 R hypothetical protein complement(495919..496143) Methylobacterium extorquens PA1 5833059 YP_001637947.1 CDS Mext_0455 NC_010172.1 496314 496568 R KEGG: cel:C18D11.9 C18D11.9; hypothetical protein complement(496314..496568) Methylobacterium extorquens PA1 5833060 YP_001637948.1 CDS Mext_0456 NC_010172.1 496791 497036 D hypothetical protein 496791..497036 Methylobacterium extorquens PA1 5833061 YP_001637949.1 CDS Mext_0457 NC_010172.1 497084 497500 D PFAM: protein of unknown function DUF1236; KEGG: nha:Nham_0234 hypothetical protein; hypothetical protein 497084..497500 Methylobacterium extorquens PA1 5831366 YP_001637950.1 CDS Mext_0458 NC_010172.1 497599 498279 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mes:Meso_3107 RNA polymerase, sigma-24 subunit, ECF subfamily; sigma-70 family RNA polymerase sigma factor complement(497599..498279) Methylobacterium extorquens PA1 5831367 YP_001637951.1 CDS Mext_0459 NC_010172.1 498693 499223 D PFAM: response regulator receiver; KEGG: rle:RL3611 putative two-component response regulator transcriptional regulatory protein; response regulator receiver 498693..499223 Methylobacterium extorquens PA1 5831368 YP_001637952.1 CDS Mext_0460 NC_010172.1 499430 500554 D PFAM: Ion transport 2 domain protein; KEGG: maq:Maqu_0775 ion transport 2 domain protein; Ion transport 2 domain-containing protein 499430..500554 Methylobacterium extorquens PA1 5831369 YP_001637953.1 CDS Mext_0461 NC_010172.1 501034 501966 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mes:Meso_4540 transcriptional regulator, LysR family; regulatory protein LysR complement(501034..501966) Methylobacterium extorquens PA1 5831166 YP_001637954.1 CDS Mext_0462 NC_010172.1 502108 503439 D PFAM: sodium:dicarboxylate symporter; KEGG: pfo:Pfl_2773 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 502108..503439 Methylobacterium extorquens PA1 5831167 YP_001637955.1 CDS Mext_0463 NC_010172.1 503504 504667 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bja:bll6730 hypothetical protein; mandelate racemase/muconate lactonizing protein 503504..504667 Methylobacterium extorquens PA1 5831168 YP_001637956.1 CDS Mext_0464 NC_010172.1 504774 505382 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bra:BRADO4306 putative glyoxalase; glyoxalase/bleomycin resistance protein/dioxygenase 504774..505382 Methylobacterium extorquens PA1 5831169 YP_001637957.1 CDS Mext_0465 NC_010172.1 505493 505885 D KEGG: ppf:Pput_4013 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 505493..505885 Methylobacterium extorquens PA1 5831985 YP_001637958.1 CDS Mext_0466 NC_010172.1 505929 506693 D hypothetical protein 505929..506693 Methylobacterium extorquens PA1 5831986 YP_001637959.1 CDS Mext_0467 NC_010172.1 506699 507466 D hypothetical protein 506699..507466 Methylobacterium extorquens PA1 5831987 YP_001637960.1 CDS Mext_0468 NC_010172.1 508251 508562 D KEGG: rde:RD1_2486 hypothetical protein; hypothetical protein 508251..508562 Methylobacterium extorquens PA1 5831988 YP_001637961.1 CDS Mext_0469 NC_010172.1 508806 509087 R hypothetical protein complement(508806..509087) Methylobacterium extorquens PA1 5832411 YP_001637962.1 CDS Mext_0470 NC_010172.1 509166 515303 D KEGG: bja:bll8089 hypothetical protein; hypothetical protein 509166..515303 Methylobacterium extorquens PA1 5832412 YP_001637963.1 CDS Mext_0471 NC_010172.1 515701 516042 D hypothetical protein 515701..516042 Methylobacterium extorquens PA1 5832413 YP_001637964.1 CDS Mext_0472 NC_010172.1 516226 516630 D hypothetical protein 516226..516630 Methylobacterium extorquens PA1 5832414 YP_001637965.1 CDS Mext_0473 NC_010172.1 516906 518039 R PFAM: integrase family protein; KEGG: xfa:XF0678 phage-related integrase; integrase family protein complement(516906..518039) Methylobacterium extorquens PA1 5832625 YP_001637966.1 CDS Mext_0474 NC_010172.1 518691 521003 R hypothetical protein complement(518691..521003) Methylobacterium extorquens PA1 5832626 YP_001637967.1 CDS Mext_0478 NC_010172.1 522568 523185 R PFAM: regulatory protein MerR; KEGG: sal:Sala_2558 transcriptional regulator, MerR family; regulatory protein MerR complement(522568..523185) Methylobacterium extorquens PA1 5832628 YP_001637968.1 CDS Mext_0479 NC_010172.1 524101 524445 R PFAM: TM2 domain containing protein?; KEGG: cyb:CYB_1650 TM2 domain protein; TM2 domain-containing protein complement(524101..524445) Methylobacterium extorquens PA1 5833516 YP_001637969.1 CDS Mext_0481 NC_010172.1 524921 526312 D PFAM: Integrase catalytic region; Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: nwi:Nwi_2917 integrase, catalytic region; integrase catalytic subunit 524921..526312 Methylobacterium extorquens PA1 5833518 YP_001637970.1 CDS Mext_0482 NC_010172.1 526452 526919 R hypothetical protein complement(526452..526919) Methylobacterium extorquens PA1 5833519 YP_001637971.1 CDS Mext_0483 NC_010172.1 527114 527545 R PFAM: ribonuclease H; KEGG: rfr:Rfer_1464 ribonuclease H; ribonuclease H complement(527114..527545) Methylobacterium extorquens PA1 5831292 YP_001637972.1 CDS Mext_0484 NC_010172.1 528568 529146 R KEGG: kpn:KPN_pKPN5p08190 hypothetical protein; hypothetical protein complement(528568..529146) Methylobacterium extorquens PA1 5831293 YP_001637973.1 CDS Mext_0485 NC_010172.1 529146 530366 R PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: rso:RSc0805 hypothetical protein; hypothetical protein complement(529146..530366) Methylobacterium extorquens PA1 5831294 YP_001637974.1 CDS Mext_0486 NC_010172.1 530424 531320 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc0804 probable transcription regulator protein; LysR substrate-binding protein 530424..531320 Methylobacterium extorquens PA1 5831295 YP_001637975.1 CDS Mext_0487 NC_010172.1 531608 532087 R KEGG: reh:H16_B2110 multimeric flavodoxin; multimeric flavodoxin complement(531608..532087) Methylobacterium extorquens PA1 5831696 YP_001637976.1 CDS Mext_0488 NC_010172.1 532197 532439 R hypothetical protein complement(532197..532439) Methylobacterium extorquens PA1 5831697 YP_001637977.1 CDS Mext_0489 NC_010172.1 533775 534593 D PFAM: UspA domain protein; KEGG: rpc:RPC_4049 hypothetical protein; UspA domain-containing protein 533775..534593 Methylobacterium extorquens PA1 5831698 YP_001637978.1 CDS Mext_0491 NC_010172.1 535771 535983 R hypothetical protein complement(535771..535983) Methylobacterium extorquens PA1 5832908 YP_001637979.1 CDS Mext_0492 NC_010172.1 536033 536533 R KEGG: pla:Plav_0358 signal transduction histidine kinase; hypothetical protein complement(536033..536533) Methylobacterium extorquens PA1 5832909 YP_001637980.1 CDS Mext_0493 NC_010172.1 536930 537253 D KEGG: nha:Nham_1250 phasin 2; hypothetical protein 536930..537253 Methylobacterium extorquens PA1 5832910 YP_001637981.1 CDS Mext_0494 NC_010172.1 537456 537647 D hypothetical protein 537456..537647 Methylobacterium extorquens PA1 5832911 YP_001637982.1 CDS Mext_0495 NC_010172.1 537817 539541 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: azo:azo2649 GGDEF family protein; diguanylate cyclase 537817..539541 Methylobacterium extorquens PA1 5832492 YP_001637983.1 CDS Mext_0496 NC_010172.1 540368 540658 D hypothetical protein 540368..540658 Methylobacterium extorquens PA1 5832493 YP_001637984.1 CDS Mext_0497 NC_010172.1 540990 541199 D hypothetical protein 540990..541199 Methylobacterium extorquens PA1 5832494 YP_001637985.1 CDS Mext_0498 NC_010172.1 541630 542445 R KEGG: rle:RL3648 putative galactosyl transferase; hypothetical protein complement(541630..542445) Methylobacterium extorquens PA1 5832495 YP_001637986.1 CDS Mext_0499 NC_010172.1 542458 543459 R KEGG: sil:SPO2649 hypothetical protein; hypothetical protein complement(542458..543459) Methylobacterium extorquens PA1 5833733 YP_001637987.1 CDS Mext_0500 NC_010172.1 543899 544837 R KEGG: smd:Smed_3881 hypothetical protein; hypothetical protein complement(543899..544837) Methylobacterium extorquens PA1 5833734 YP_001637988.1 CDS Mext_0501 NC_010172.1 544837 545601 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bra:BRADO2072 putative 3-demethylubiquinone-9 3-O-methyltransferase; type 12 methyltransferase complement(544837..545601) Methylobacterium extorquens PA1 5833735 YP_001637989.1 CDS Mext_0502 NC_010172.1 545598 546203 R PFAM: Phosphoglycerate mutase; KEGG: sme:SMb20250 hypothetical protein; phosphoglycerate mutase complement(545598..546203) Methylobacterium extorquens PA1 5833736 YP_001637990.1 CDS Mext_0503 NC_010172.1 546200 547291 R PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: mes:Meso_2694 myo-inositol-1-phosphate synthase; myo-inositol-1-phosphate synthase complement(546200..547291) Methylobacterium extorquens PA1 5832942 YP_001637991.1 CDS Mext_0504 NC_010172.1 547291 548361 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mes:Meso_2774 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(547291..548361) Methylobacterium extorquens PA1 5832943 YP_001637992.1 CDS Mext_0505 NC_010172.1 548484 549605 R KEGG: ade:Adeh_1058 hypothetical protein; hypothetical protein complement(548484..549605) Methylobacterium extorquens PA1 5832944 YP_001637993.1 CDS Mext_0506 NC_010172.1 549602 550714 R KEGG: mes:Meso_2776 hypothetical protein; hypothetical protein complement(549602..550714) Methylobacterium extorquens PA1 5832945 YP_001637994.1 CDS Mext_0507 NC_010172.1 550711 551832 R KEGG: rsq:Rsph17025_2428 hypothetical protein; hypothetical protein complement(550711..551832) Methylobacterium extorquens PA1 5833496 YP_001637995.1 CDS Mext_0508 NC_010172.1 551829 552965 R PFAM: glycosyl transferase group 1; KEGG: rsq:Rsph17025_2429 glycosyl transferase, group 1; group 1 glycosyl transferase complement(551829..552965) Methylobacterium extorquens PA1 5833497 YP_001637996.1 CDS Mext_0509 NC_010172.1 552956 554248 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bra:BRADO2067 putative Fe-S oxidoreductase homolog to magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase; radical SAM domain-containing protein complement(552956..554248) Methylobacterium extorquens PA1 5833498 YP_001637997.1 CDS Mext_0510 NC_010172.1 554245 555348 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ret:RHE_PB00053 probable nucleoside diphosphate epimerase protein; NAD-dependent epimerase/dehydratase complement(554245..555348) Methylobacterium extorquens PA1 5833499 YP_001637998.1 CDS Mext_0511 NC_010172.1 555345 556511 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: afw:Anae109_3216 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(555345..556511) Methylobacterium extorquens PA1 5832270 YP_001637999.1 CDS Mext_0512 NC_010172.1 556903 557151 R KEGG: sco:SCO0647 short chain oxidoreductase; short chain oxidoreductase complement(556903..557151) Methylobacterium extorquens PA1 5832271 YP_001638000.1 CDS Mext_0514 NC_010172.1 558034 558399 R KEGG: rle:RL1211 hypothetical protein; hypothetical protein complement(558034..558399) Methylobacterium extorquens PA1 5832273 YP_001638001.1 CDS Mext_0515 NC_010172.1 558559 560289 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: ret:RHE_CH02415 putative cytochrome biogenesis protein; cytochrome c biogenesis protein transmembrane protein complement(558559..560289) Methylobacterium extorquens PA1 5833124 YP_001638002.1 CDS Mext_0516 NC_010172.1 560545 561288 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pfo:Pfl_2086 two component transcriptional regulator, winged helix family; response regulator receiver 560545..561288 Methylobacterium extorquens PA1 5833125 YP_001638003.1 CDS Mext_0517 NC_010172.1 561288 562586 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: reu:Reut_B3910 ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal; ATPase domain-containing protein 561288..562586 Methylobacterium extorquens PA1 5833126 YP_001638004.1 CDS Mext_0518 NC_010172.1 562616 564217 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_CH01180 probable ABC transporter, ATP-binding protein; ABC transporter-like protein complement(562616..564217) Methylobacterium extorquens PA1 5833127 YP_001638005.1 CDS Mext_0519 NC_010172.1 564594 565619 D PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_1119 putative hydrolase, alpha/beta fold family; alpha/beta hydrolase fold protein 564594..565619 Methylobacterium extorquens PA1 5833544 YP_001638006.1 CDS Mext_0520 NC_010172.1 565603 566124 D KEGG: pfo:Pfl_2256 putative cytochrome P460; putative cytochrome P460 565603..566124 Methylobacterium extorquens PA1 5833545 YP_001638007.1 CDS Mext_0521 NC_010172.1 566114 567241 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sme:SMc00621 adenylate cyclase 2 protein; adenylyl cyclase class-3/4/guanylyl cyclase 566114..567241 Methylobacterium extorquens PA1 5833546 YP_001638008.1 CDS Mext_0522 NC_010172.1 567786 568067 R hypothetical protein complement(567786..568067) Methylobacterium extorquens PA1 5833547 YP_001638009.1 CDS Mext_0523 NC_010172.1 568212 569384 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rme:Rmet_1715 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein complement(568212..569384) Methylobacterium extorquens PA1 5833839 YP_001638010.1 CDS Mext_0524 NC_010172.1 569640 570524 R KEGG: rpe:RPE_1623 hypothetical protein; hypothetical protein complement(569640..570524) Methylobacterium extorquens PA1 5833840 YP_001638011.1 CDS Mext_0525 NC_010172.1 570601 571077 R hypothetical protein complement(570601..571077) Methylobacterium extorquens PA1 5833841 YP_001638012.1 CDS Mext_0526 NC_010172.1 571349 573043 R PFAM: sulfatase; KEGG: bja:bll5074 putative arylsulfatase; sulfatase complement(571349..573043) Methylobacterium extorquens PA1 5833842 YP_001638013.1 CDS Mext_0527 NC_010172.1 573046 574023 R PFAM: protein of unknown function DUF323; KEGG: bja:bll4742 hypothetical protein; hypothetical protein complement(573046..574023) Methylobacterium extorquens PA1 5831891 YP_001638014.1 CDS Mext_0528 NC_010172.1 574468 576837 R KEGG: rpa:RPA3746 possible RND superfamily transporter; RND superfamily transporter complement(574468..576837) Methylobacterium extorquens PA1 5831892 YP_001638015.1 CDS Mext_0529 NC_010172.1 576874 577446 R KEGG: rpc:RPC_1715 hypothetical protein; hypothetical protein complement(576874..577446) Methylobacterium extorquens PA1 5831893 YP_001638016.1 CDS Mext_0530 NC_010172.1 578813 579877 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pfo:Pfl_2761 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 578813..579877 Methylobacterium extorquens PA1 5831894 YP_001638017.1 CDS Mext_0531 NC_010172.1 580688 581725 D KEGG: xau:Xaut_3413 hypothetical protein; hypothetical protein 580688..581725 Methylobacterium extorquens PA1 5832465 YP_001638018.1 CDS Mext_0532 NC_010172.1 581806 582096 R hypothetical protein complement(581806..582096) Methylobacterium extorquens PA1 5832466 YP_001638019.1 CDS Mext_0533 NC_010172.1 582224 582496 R KEGG: mlo:mlr5309 Na+/H+ antiporter; Na+/H+ antiporter complement(582224..582496) Methylobacterium extorquens PA1 5832467 YP_001638020.1 CDS Mext_0534 NC_010172.1 582663 583124 R KEGG: rpd:RPD_2417 hypothetical protein; hypothetical protein complement(582663..583124) Methylobacterium extorquens PA1 5832468 YP_001638021.1 CDS Mext_0535 NC_010172.1 583860 584168 R KEGG: bbt:BBta_p0210 putative insertion element protein; hypothetical protein complement(583860..584168) Methylobacterium extorquens PA1 5832281 YP_001638022.1 CDS Mext_0536 NC_010172.1 584530 584778 R hypothetical protein complement(584530..584778) Methylobacterium extorquens PA1 5832282 YP_001638023.1 CDS Mext_0537 NC_010172.1 585179 586042 R PFAM: peptidase M23B; KEGG: xau:Xaut_1905 peptidase M23B; peptidase M23B complement(585179..586042) Methylobacterium extorquens PA1 5832283 YP_001638024.1 CDS Mext_0538 NC_010172.1 586445 586777 D hypothetical protein 586445..586777 Methylobacterium extorquens PA1 5832284 YP_001638025.1 CDS Mext_0539 NC_010172.1 586872 587291 D KEGG: hch:HCH_04570 transposase and inactivated derivatives; hypothetical protein 586872..587291 Methylobacterium extorquens PA1 5832474 YP_001638026.1 CDS Mext_0540 NC_010172.1 587437 587733 D KEGG: sma:SAV494 hypothetical protein; hypothetical protein 587437..587733 Methylobacterium extorquens PA1 5832475 YP_001638027.1 CDS Mext_0541 NC_010172.1 588418 589326 D KEGG: bra:BRADO2970 hypothetical protein; hypothetical protein 588418..589326 Methylobacterium extorquens PA1 5832476 YP_001638028.1 CDS pepN NC_010172.1 589405 592041 D TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: xau:Xaut_4749 aminopeptidase N; aminopeptidase N 589405..592041 Methylobacterium extorquens PA1 5832477 YP_001638029.1 CDS Mext_0543 NC_010172.1 592227 594587 D KEGG: xau:Xaut_1626 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein 592227..594587 Methylobacterium extorquens PA1 5833755 YP_001638030.1 CDS Mext_0544 NC_010172.1 594996 595922 D TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: smd:Smed_2891 arginase; arginase 594996..595922 Methylobacterium extorquens PA1 5833756 YP_001638031.1 CDS Mext_0545 NC_010172.1 595986 597593 R KEGG: gbe:GbCGDNIH1_0798 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase complement(595986..597593) Methylobacterium extorquens PA1 5833757 YP_001638032.1 CDS Mext_0546 NC_010172.1 597734 598291 R hypothetical protein complement(597734..598291) Methylobacterium extorquens PA1 5833758 YP_001638033.1 CDS Mext_0547 NC_010172.1 598561 598722 D hypothetical protein 598561..598722 Methylobacterium extorquens PA1 5831269 YP_001638034.1 CDS Mext_0548 NC_010172.1 598802 599125 R PFAM: CutA1 divalent ion tolerance protein; KEGG: pla:Plav_2702 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein complement(598802..599125) Methylobacterium extorquens PA1 5831270 YP_001638035.1 CDS Mext_0549 NC_010172.1 599230 600000 D PFAM: ATP-NAD/AcoX kinase; KEGG: xau:Xaut_1643 NAD(+) kinase; NAD(+) kinase 599230..600000 Methylobacterium extorquens PA1 5831271 YP_001638036.1 CDS Mext_0550 NC_010172.1 600069 600296 R PFAM: protein of unknown function DUF1674; KEGG: rpe:RPE_0029 protein of unknown function DUF1674; hypothetical protein complement(600069..600296) Methylobacterium extorquens PA1 5831272 YP_001638037.1 CDS Mext_0551 NC_010172.1 600473 601750 D PFAM: Fmu (Sun) domain protein; methyltransferase small; Methyltransferase type 11; KEGG: xau:Xaut_0038 sun protein; Fmu (Sun) domain-containing protein 600473..601750 Methylobacterium extorquens PA1 5833536 YP_001638038.1 CDS Mext_0552 NC_010172.1 601810 601974 R hypothetical protein complement(601810..601974) Methylobacterium extorquens PA1 5833537 YP_001638039.1 CDS Mext_0553 NC_010172.1 602321 603355 D KEGG: bja:blr1554 hypothetical protein; hypothetical protein 602321..603355 Methylobacterium extorquens PA1 5833538 YP_001638040.1 CDS Mext_0554 NC_010172.1 603725 604918 D PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III; KEGG: mxa:MXAN_2571 aminotransferase, class II; class I and II aminotransferase 603725..604918 Methylobacterium extorquens PA1 5833539 YP_001638041.1 CDS Mext_0555 NC_010172.1 604979 605308 R hypothetical protein complement(604979..605308) Methylobacterium extorquens PA1 5835796 YP_001638042.1 CDS Mext_0556 NC_010172.1 605654 606586 D TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: rpb:RPB_2466 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 605654..606586 Methylobacterium extorquens PA1 5835797 YP_001638043.1 CDS Mext_0557 NC_010172.1 606696 607436 D TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: pla:Plav_3359 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 606696..607436 Methylobacterium extorquens PA1 5835798 YP_001638044.1 CDS acpP NC_010172.1 607700 607936 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 607700..607936 Methylobacterium extorquens PA1 5835799 YP_001638045.1 CDS Mext_0559 NC_010172.1 608075 609337 D TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: rpa:RPA3072 3-oxoacyl-acyl carrier protein synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase 2 608075..609337 Methylobacterium extorquens PA1 5832098 YP_001638046.1 CDS Mext_0560 NC_010172.1 609600 611003 D PFAM: aminodeoxychorismate lyase; KEGG: nha:Nham_2350 aminodeoxychorismate lyase; aminodeoxychorismate lyase 609600..611003 Methylobacterium extorquens PA1 5832099 YP_001638047.1 CDS Mext_0561 NC_010172.1 611033 611779 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: csc:Csac_0438 beta-phosphoglucomutase family hydrolase; HAD family hydrolase complement(611033..611779) Methylobacterium extorquens PA1 5832100 YP_001638048.1 CDS Mext_0562 NC_010172.1 611763 614150 R PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: nca:Noca_3421 kojibiose phosphorylase; Kojibiose phosphorylase complement(611763..614150) Methylobacterium extorquens PA1 5832101 YP_001638049.1 CDS Mext_0563 NC_010172.1 615009 616211 D TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: sme:SMb21184 putative acetate kinase (acetokinase) protein; acetate kinase 615009..616211 Methylobacterium extorquens PA1 5832133 YP_001638050.1 CDS Mext_0564 NC_010172.1 616208 617239 D PFAM: secretion protein HlyD family protein; KEGG: rpa:RPA0681 membrane permeases, predicted cation efflux pump; secretion protein HlyD family protein 616208..617239 Methylobacterium extorquens PA1 5832134 YP_001638051.1 CDS Mext_0565 NC_010172.1 617247 619985 D PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: rpa:RPA0682 possible ABC transporter ATP-binding component, membrane bound; ABC transporter-like protein 617247..619985 Methylobacterium extorquens PA1 5832135 YP_001638052.1 CDS Mext_0566 NC_010172.1 619987 621186 D PFAM: ABC-2 type transporter; KEGG: rle:pRL90045 putative ABC transporter permease component; ABC-2 type transporter 619987..621186 Methylobacterium extorquens PA1 5832136 YP_001638053.1 CDS Mext_0567 NC_010172.1 621266 623701 D PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: bja:bll2518 putative phosphoketolase; putative phosphoketolase 621266..623701 Methylobacterium extorquens PA1 5834457 YP_001638054.1 CDS Mext_0568 NC_010172.1 623825 624955 D PFAM: monooxygenase FAD-binding; KEGG: stp:Strop_2657 monooxygenase, FAD-binding; FAD-binding monooxygenase 623825..624955 Methylobacterium extorquens PA1 5834458 YP_001638055.1 CDS Mext_0569 NC_010172.1 625248 626423 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: xau:Xaut_4408 ABC transporter related; ABC transporter-like protein 625248..626423 Methylobacterium extorquens PA1 5834460 YP_001638056.1 CDS Mext_0570 NC_010172.1 626526 627551 D PFAM: extracellular solute-binding protein family 1; KEGG: bov:BOV_A0655 putative iron compound ABC transporter, periplasmic iron compound-binding protein; extracellular solute-binding protein 626526..627551 Methylobacterium extorquens PA1 5834116 YP_001638057.1 CDS Mext_0571 NC_010172.1 627628 629280 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_4446 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 627628..629280 Methylobacterium extorquens PA1 5834117 YP_001638058.1 CDS Mext_0572 NC_010172.1 629703 630158 R hypothetical protein complement(629703..630158) Methylobacterium extorquens PA1 5834118 YP_001638059.1 CDS Mext_0573 NC_010172.1 630242 630967 R PFAM: protein of unknown function DUF540; KEGG: bmb:BruAb1_0163 hypothetical protein; hypothetical protein complement(630242..630967) Methylobacterium extorquens PA1 5834171 YP_001638060.1 CDS Mext_0574 NC_010172.1 631127 632092 D PFAM: Kelch repeat-containing protein; Kelch repeat protein; KEGG: noc:Noc_0230 hypothetical protein; kelch repeat-containing protein 631127..632092 Methylobacterium extorquens PA1 5834172 YP_001638061.1 CDS Mext_0575 NC_010172.1 632180 633508 D PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bja:blr0703 hypothetical protein; amine oxidase 632180..633508 Methylobacterium extorquens PA1 5834173 YP_001638062.1 CDS Mext_0576 NC_010172.1 633617 634252 D PFAM: cyclic nucleotide-binding; KEGG: rpb:RPB_1692 cyclic nucleotide-binding domain (cNMP-BD) protein; cyclic nucleotide-binding protein 633617..634252 Methylobacterium extorquens PA1 5834174 YP_001638063.1 CDS Mext_0577 NC_010172.1 634256 634675 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: acr:Acry_2974 cupin 2, conserved barrel domain protein; cupin complement(634256..634675) Methylobacterium extorquens PA1 5834019 YP_001638064.1 CDS Mext_0578 NC_010172.1 634913 635086 D hypothetical protein 634913..635086 Methylobacterium extorquens PA1 5834020 YP_001638065.1 CDS Mext_0579 NC_010172.1 635513 635803 R hypothetical protein complement(635513..635803) Methylobacterium extorquens PA1 5834021 YP_001638066.1 CDS Mext_0581 NC_010172.1 636438 637505 D TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_4544 sulfate ABC transporter, periplasmic sulfate-binding protein; sulfate ABC transporter substrate-binding protein 636438..637505 Methylobacterium extorquens PA1 5833978 YP_001638067.1 CDS Mext_0582 NC_010172.1 637510 638364 D TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00258 probable sulfate uptake ABC transporter, permease protein; sulfate ABC transporter permease 637510..638364 Methylobacterium extorquens PA1 5833979 YP_001638068.1 CDS Mext_0583 NC_010172.1 638357 639259 D TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0109 sulfate ABC transporter, permease protein; sulfate ABC transporter permease 638357..639259 Methylobacterium extorquens PA1 5833980 YP_001638069.1 CDS Mext_0584 NC_010172.1 639261 640307 D KEGG: mlo:mlr1669 ATP-binding protein of sulfate ABC transporter; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter ATPase 639261..640307 Methylobacterium extorquens PA1 5833981 YP_001638070.1 CDS Mext_0585 NC_010172.1 646766 647287 R KEGG: bbt:BBta_0200 putative membrane protein of unknown function; hypothetical protein complement(646766..647287) Methylobacterium extorquens PA1 5835761 YP_001638071.1 CDS Mext_0586 NC_010172.1 647308 648120 D KEGG: rru:Rru_A0153 endonuclease III/Nth; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; endonuclease III 647308..648120 Methylobacterium extorquens PA1 5835810 YP_001638072.1 CDS Mext_0587 NC_010172.1 648314 649108 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 648314..649108 Methylobacterium extorquens PA1 5835811 YP_001638073.1 CDS Mext_0588 NC_010172.1 649115 650770 R PFAM: glycosyl transferase family 2; KEGG: mca:MCA0620 glycosyl transferase, group 2 family protein; glycosyl transferase family protein complement(649115..650770) Methylobacterium extorquens PA1 5835812 YP_001638074.1 CDS Mext_0589 NC_010172.1 650767 652821 R PFAM: glycosyl transferase family 2; KEGG: gbe:GbCGDNIH1_0744 glycosyltransferase; glycosyl transferase family protein complement(650767..652821) Methylobacterium extorquens PA1 5835813 YP_001638075.1 CDS Mext_0590 NC_010172.1 652880 653512 R KEGG: xau:Xaut_2202 hypothetical protein; hypothetical protein complement(652880..653512) Methylobacterium extorquens PA1 5834211 YP_001638076.1 CDS Mext_0591 NC_010172.1 653573 654115 R PFAM: Invasion associated locus B family protein; KEGG: xau:Xaut_4649 invasion associated locus B family protein; invasion associated locus B family protein complement(653573..654115) Methylobacterium extorquens PA1 5834212 YP_001638077.1 CDS Mext_0592 NC_010172.1 654274 654771 D hypothetical protein 654274..654771 Methylobacterium extorquens PA1 5834213 YP_001638078.1 CDS Mext_0593 NC_010172.1 654858 655640 R PFAM: protein of unknown function DUF45; KEGG: nwi:Nwi_0131 protein of unknown function DUF45; hypothetical protein complement(654858..655640) Methylobacterium extorquens PA1 5834214 YP_001638079.1 CDS Mext_0594 NC_010172.1 655679 656923 R TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mlo:mll4552 intracellular PHB depolymerase; polyhydroxyalkanoate depolymerase complement(655679..656923) Methylobacterium extorquens PA1 5835252 YP_001638080.1 CDS Mext_0595 NC_010172.1 657069 658463 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mlo:mlr5307 two-component, sensor histidine protein kinase; ATPase domain-containing protein 657069..658463 Methylobacterium extorquens PA1 5835253 YP_001638081.1 CDS Mext_0596 NC_010172.1 658473 659102 D PFAM: response regulator receiver; KEGG: bov:BOV_0131 DNA-binding response regulator; response regulator receiver 658473..659102 Methylobacterium extorquens PA1 5835254 YP_001638082.1 CDS Mext_0597 NC_010172.1 659284 659508 D KEGG: xau:Xaut_0190 putative exported protein of unknown function; hypothetical protein 659284..659508 Methylobacterium extorquens PA1 5835255 YP_001638083.1 CDS Mext_0598 NC_010172.1 659700 659939 D TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: nha:Nham_1634 phosphoribosylformylglycinamidine synthetase PurS; phosphoribosylformylglycinamidine synthase PurS 659700..659939 Methylobacterium extorquens PA1 5834502 YP_001638084.1 CDS Mext_0599 NC_010172.1 659939 660619 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 659939..660619 Methylobacterium extorquens PA1 5834503 YP_001638085.1 CDS Mext_0600 NC_010172.1 660745 661290 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(660745..661290) Methylobacterium extorquens PA1 5834504 YP_001638086.1 CDS Mext_0601 NC_010172.1 661373 662167 R PFAM: inositol monophosphatase; KEGG: nwi:Nwi_2740 inositol monophosphatase; inositol-phosphate phosphatase complement(661373..662167) Methylobacterium extorquens PA1 5834505 YP_001638087.1 CDS Mext_0602 NC_010172.1 662450 663067 R PFAM: thiamine monophosphate synthase; KEGG: xau:Xaut_2226 thiamine monophosphate synthase; thiamine monophosphate synthase complement(662450..663067) Methylobacterium extorquens PA1 5834996 YP_001638088.1 CDS Mext_0603 NC_010172.1 663074 663895 R PFAM: thiazole biosynthesis family protein; KEGG: xau:Xaut_2225 thiazole biosynthesis family protein; thiazole biosynthesis family protein complement(663074..663895) Methylobacterium extorquens PA1 5834997 YP_001638089.1 CDS Mext_0604 NC_010172.1 663898 664110 R TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: xau:Xaut_2224 thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS complement(663898..664110) Methylobacterium extorquens PA1 5834998 YP_001638090.1 CDS Mext_0605 NC_010172.1 664107 665429 R TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: xau:Xaut_2223 glycine oxidase ThiO; glycine oxidase ThiO complement(664107..665429) Methylobacterium extorquens PA1 5834999 YP_001638091.1 CDS Mext_0606 NC_010172.1 665667 667067 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: smd:Smed_4273 putative adenylate/guanylate cyclase; adenylyl cyclase class-3/4/guanylyl cyclase complement(665667..667067) Methylobacterium extorquens PA1 5835782 YP_001638092.1 CDS Mext_0607 NC_010172.1 667238 667606 D KEGG: mag:amb3555 hypothetical protein; hypothetical protein 667238..667606 Methylobacterium extorquens PA1 5835783 YP_001638093.1 CDS Mext_0608 NC_010172.1 667898 668902 D SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMc00479 putative transcription regulator protein; helix-turn-helix domain-containing protein 667898..668902 Methylobacterium extorquens PA1 5835784 YP_001638094.1 CDS Mext_0609 NC_010172.1 668911 670254 D PFAM: major facilitator superfamily MFS_1; KEGG: swi:Swit_3077 major facilitator superfamily MFS_1; major facilitator transporter 668911..670254 Methylobacterium extorquens PA1 5834988 YP_001638095.1 CDS Mext_0610 NC_010172.1 670299 672455 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD complement(670299..672455) Methylobacterium extorquens PA1 5834989 YP_001638096.1 CDS dnaG NC_010172.1 672501 674426 R synthesizes RNA primers at the replication forks; DNA primase complement(672501..674426) Methylobacterium extorquens PA1 5834990 YP_001638097.1 CDS Mext_0612 NC_010172.1 674561 675547 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: atc:AGR_L_1647 possible gluconolactonase precursor; gluconolactonase 674561..675547 Methylobacterium extorquens PA1 5834991 YP_001638098.1 CDS Mext_0613 NC_010172.1 675544 676710 D KEGG: psb:Psyr_2718 major royal jelly protein; hypothetical protein 675544..676710 Methylobacterium extorquens PA1 5834297 YP_001638099.1 CDS Mext_0614 NC_010172.1 676898 677356 R KEGG: rpa:RPA1278 GatB/YqeY; GatB/YqeY complement(676898..677356) Methylobacterium extorquens PA1 5834298 YP_001638100.1 CDS Mext_0615 NC_010172.1 677546 678796 D TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: xau:Xaut_1243 carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit 677546..678796 Methylobacterium extorquens PA1 5834299 YP_001638101.1 CDS Mext_0616 NC_010172.1 678935 679309 D hypothetical protein 678935..679309 Methylobacterium extorquens PA1 5834300 YP_001638102.1 CDS Mext_0617 NC_010172.1 679350 682025 R hypothetical protein complement(679350..682025) Methylobacterium extorquens PA1 5835003 YP_001638103.1 CDS flgB NC_010172.1 682183 682572 D with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella; flagellar basal body rod protein FlgB 682183..682572 Methylobacterium extorquens PA1 5835004 YP_001638104.1 CDS flgC NC_010172.1 682569 682985 D with FlgF and B makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod protein FlgC 682569..682985 Methylobacterium extorquens PA1 5835005 YP_001638105.1 CDS Mext_0620 NC_010172.1 682999 683352 D PFAM: flagellar hook-basal body complex protein FliE; KEGG: sme:SMc03029 flagellar hook-basal body complex protein; flagellar hook-basal body complex protein FliE 682999..683352 Methylobacterium extorquens PA1 5835006 YP_001638106.1 CDS flgG NC_010172.1 683445 684233 D makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod protein FlgG 683445..684233 Methylobacterium extorquens PA1 5834308 YP_001638107.1 CDS Mext_0622 NC_010172.1 684299 684793 D KEGG: oan:Oant_4208 FlgA, flagellar basal-body P-ring formation protein; FlgA, flagellar basal-body P-ring formation protein 684299..684793 Methylobacterium extorquens PA1 5834309 YP_001638108.1 CDS flgI NC_010172.1 684790 685917 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar basal body P-ring protein 684790..685917 Methylobacterium extorquens PA1 5834310 YP_001638109.1 CDS Mext_0624 NC_010172.1 685917 686501 D KEGG: rpe:RPE_1161 hypothetical protein; hypothetical protein 685917..686501 Methylobacterium extorquens PA1 5834311 YP_001638110.1 CDS Mext_0625 NC_010172.1 686501 687208 D PFAM: flagellar L-ring protein; KEGG: bja:bll6869 flagellar L-ring protein precursor; flagellar L-ring protein 686501..687208 Methylobacterium extorquens PA1 5835014 YP_001638111.1 CDS Mext_0626 NC_010172.1 687291 687773 D PFAM: flagellar basal body-associated protein FliL; KEGG: rpe:RPE_1163 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 687291..687773 Methylobacterium extorquens PA1 5835015 YP_001638112.1 CDS fliP NC_010172.1 687770 688552 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagellum; flagellar biosynthesis protein FliP 687770..688552 Methylobacterium extorquens PA1 5835016 YP_001638113.1 CDS Mext_0628 NC_010172.1 688714 688944 R hypothetical protein complement(688714..688944) Methylobacterium extorquens PA1 5835017 YP_001638114.1 CDS fliF NC_010172.1 689058 690737 D the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 689058..690737 Methylobacterium extorquens PA1 5833989 YP_001638115.1 CDS Mext_0630 NC_010172.1 690737 691465 D KEGG: bja:bll6863 hypothetical protein; hypothetical protein 690737..691465 Methylobacterium extorquens PA1 5833990 YP_001638116.1 CDS Mext_0631 NC_010172.1 691467 692873 D PFAM: OmpA/MotB domain protein; KEGG: bja:bll6862 probable flagellar motor protein; OmpA/MotB domain-containing protein 691467..692873 Methylobacterium extorquens PA1 5833991 YP_001638117.1 CDS Mext_0632 NC_010172.1 692870 694252 D a periplasmic protein that interacts with and stabilizes MotB; in Rhizobium, interactions between MotB and MotC at the periplasmic surface of the motor control the energy flux or the energy coupling that drives flagellar rotation; chemotaxis protein 692870..694252 Methylobacterium extorquens PA1 5833992 YP_001638118.1 CDS Mext_0633 NC_010172.1 694709 696145 D KEGG: lma:LmjF35.0290 hypothetical protein, conserved; hypothetical protein 694709..696145 Methylobacterium extorquens PA1 5834619 YP_001638119.1 CDS Mext_0634 NC_010172.1 696228 696767 D PFAM: Lytic transglycosylase catalytic; KEGG: sme:SMc03045 hypothetical protein; lytic transglycosylase 696228..696767 Methylobacterium extorquens PA1 5834620 YP_001638120.1 CDS Mext_0635 NC_010172.1 696775 697476 R PFAM: transcriptional regulator domain protein; KEGG: mlo:mlr2935 two-component response regulator; transcriptional regulator domain-containing protein complement(696775..697476) Methylobacterium extorquens PA1 5834621 YP_001638121.1 CDS Mext_0636 NC_010172.1 697698 698144 R KEGG: ret:RHE_CH00649 hypothetical protein; hypothetical protein complement(697698..698144) Methylobacterium extorquens PA1 5834622 YP_001638122.1 CDS flhB NC_010172.1 698141 699202 R membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar biosynthesis protein FlhB complement(698141..699202) Methylobacterium extorquens PA1 5834461 YP_001638123.1 CDS Mext_0638 NC_010172.1 699246 700325 R PFAM: flagellar motor switch protein FliG; KEGG: rpe:RPE_1153 flagellar motor switch protein FliG; flagellar motor switch protein FliG complement(699246..700325) Methylobacterium extorquens PA1 5834462 YP_001638124.1 CDS Mext_0639 NC_010172.1 700348 700674 R TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bja:bll6879 probable flagellar motor switch protein; flagellar motor switch protein FliN complement(700348..700674) Methylobacterium extorquens PA1 5834463 YP_001638125.1 CDS Mext_0640 NC_010172.1 700875 701147 D KEGG: rpe:RPE_1876 hypothetical protein; hypothetical protein 700875..701147 Methylobacterium extorquens PA1 5834464 YP_001638126.1 CDS Mext_0641 NC_010172.1 701161 701457 R hypothetical protein complement(701161..701457) Methylobacterium extorquens PA1 5834293 YP_001638127.1 CDS Mext_0642 NC_010172.1 701441 702475 R PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: rpc:RPC_1089 flagellar motor switch protein FliM; flagellar motor switch protein FliM complement(701441..702475) Methylobacterium extorquens PA1 5834294 YP_001638128.1 CDS Mext_0643 NC_010172.1 702490 703365 R KEGG: oan:Oant_4217 chemotaxis MotA protein; chemotaxis MotA protein complement(702490..703365) Methylobacterium extorquens PA1 5834295 YP_001638129.1 CDS Mext_0644 NC_010172.1 703563 704123 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 703563..704123 Methylobacterium extorquens PA1 5834296 YP_001638130.1 CDS hslU NC_010172.1 704235 705548 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 704235..705548 Methylobacterium extorquens PA1 5834992 YP_001638131.1 CDS Mext_0646 NC_010172.1 705551 706441 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rme:Rmet_4814 protein of unknown function DUF6, transmembrane; hypothetical protein 705551..706441 Methylobacterium extorquens PA1 5834993 YP_001638132.1 CDS Mext_0647 NC_010172.1 706475 707536 R KEGG: atc:AGR_C_4888 hypothetical protein; hypothetical protein complement(706475..707536) Methylobacterium extorquens PA1 5834994 YP_001638133.1 CDS Mext_0648 NC_010172.1 707586 708671 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: tel:tll1694 Rieske 2Fe-2S family protein; Rieske (2Fe-2S) domain-containing protein complement(707586..708671) Methylobacterium extorquens PA1 5834995 YP_001638134.1 CDS Mext_0649 NC_010172.1 709233 709697 R hypothetical protein complement(709233..709697) Methylobacterium extorquens PA1 5833985 YP_001638135.1 CDS Mext_0650 NC_010172.1 710075 710464 D KEGG: mmr:Mmar10_1580 hypothetical protein; hypothetical protein 710075..710464 Methylobacterium extorquens PA1 5833986 YP_001638136.1 CDS Mext_0651 NC_010172.1 710483 712045 D KEGG: rpd:RPD_0510 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein 710483..712045 Methylobacterium extorquens PA1 5833987 YP_001638137.1 CDS Mext_0652 NC_010172.1 712042 712389 D TIGRFAM: chorismate mutase; PFAM: Chorismate mutase; KEGG: gox:GOX2001 chorismate mutase; chorismate mutase 712042..712389 Methylobacterium extorquens PA1 5833988 YP_001638138.1 CDS rpsP NC_010172.1 712389 712751 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 712389..712751 Methylobacterium extorquens PA1 5834193 YP_001638139.1 CDS rimM NC_010172.1 712875 713546 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 712875..713546 Methylobacterium extorquens PA1 5834194 YP_001638140.1 CDS Mext_0655 NC_010172.1 713554 714348 R KEGG: rpb:RPB_1999 hypothetical protein; hypothetical protein complement(713554..714348) Methylobacterium extorquens PA1 5834195 YP_001638141.1 CDS Mext_0656 NC_010172.1 714417 715259 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bja:bll4992 hypothetical protein; type 11 methyltransferase complement(714417..715259) Methylobacterium extorquens PA1 5834196 YP_001638142.1 CDS Mext_0657 NC_010172.1 715270 715575 D hypothetical protein 715270..715575 Methylobacterium extorquens PA1 5835343 YP_001638143.1 CDS Mext_0658 NC_010172.1 715684 716406 D KEGG: xau:Xaut_2511 tRNA (guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 715684..716406 Methylobacterium extorquens PA1 5835344 YP_001638144.1 CDS Mext_0659 NC_010172.1 716580 717755 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 716580..717755 Methylobacterium extorquens PA1 5835345 YP_001638145.1 CDS Mext_0660 NC_010172.1 717913 719520 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 717913..719520 Methylobacterium extorquens PA1 5835346 YP_001638146.1 CDS Mext_0661 NC_010172.1 719666 719869 D hypothetical protein 719666..719869 Methylobacterium extorquens PA1 5833921 YP_001638147.1 CDS Mext_0662 NC_010172.1 720012 721109 D KEGG: rru:Rru_A0360 methylthioribose-1-phosphate isomerase; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; aIF-2BI family translation initiation factor 720012..721109 Methylobacterium extorquens PA1 5833922 YP_001638148.1 CDS Mext_0663 NC_010172.1 721121 721468 R KEGG: rsh:Rsph17029_3080 putative DNA-binding protein; putative DNA-binding protein complement(721121..721468) Methylobacterium extorquens PA1 5833923 YP_001638149.1 CDS Mext_0664 NC_010172.1 721534 722952 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mes:Meso_1298 MATE efflux family protein; MATE efflux family protein complement(721534..722952) Methylobacterium extorquens PA1 5833924 YP_001638150.1 CDS Mext_0665 NC_010172.1 722977 724917 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pap:PSPA7_1898 probable ATP-binding/permease fusion ABC transporter; ABC transporter-like protein complement(722977..724917) Methylobacterium extorquens PA1 5831300 YP_001638151.1 CDS Mext_0666 NC_010172.1 724974 725423 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: sme:SMc00184 putative tRNA/rRNA methyltransferase protein; tRNA/rRNA methyltransferase SpoU 724974..725423 Methylobacterium extorquens PA1 5831301 YP_001638152.1 CDS Mext_0667 NC_010172.1 725653 727350 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bra:BRADO2559 putative methyl-accepting chemotaxis protein; chemotaxis sensory transducer protein 725653..727350 Methylobacterium extorquens PA1 5831302 YP_001638153.1 CDS Mext_0668 NC_010172.1 727613 728752 D PFAM: PspA/IM30 family protein; KEGG: rle:RL3579 putative phage-related protein; PspA/IM30 family protein 727613..728752 Methylobacterium extorquens PA1 5831303 YP_001638154.1 CDS Mext_0669 NC_010172.1 728749 729417 D PFAM: protein of unknown function DUF1449; KEGG: rle:RL3580 putative transmembrane protein; hypothetical protein 728749..729417 Methylobacterium extorquens PA1 5835208 YP_001638155.1 CDS Mext_0672 NC_010172.1 731340 733526 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bbr:BB1785 putative ferrisiderophore receptor; TonB-dependent siderophore receptor 731340..733526 Methylobacterium extorquens PA1 5835210 YP_001638156.1 CDS Mext_0673 NC_010172.1 733570 734493 D catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 733570..734493 Methylobacterium extorquens PA1 5835211 YP_001638157.1 CDS Mext_0674 NC_010172.1 734541 735662 D KEGG: bra:BRADO5919 conserved hypothetical protein; putative deoxyribonuclease; putative deoxyribonuclease 734541..735662 Methylobacterium extorquens PA1 5835062 YP_001638158.1 CDS Mext_0675 NC_010172.1 735813 737090 R KEGG: sen:SACE_4319 aspartate aminotransferase; aspartate aminotransferase complement(735813..737090) Methylobacterium extorquens PA1 5835063 YP_001638159.1 CDS Mext_0676 NC_010172.1 737475 738155 D PFAM: transcriptional regulator domain protein; KEGG: mlo:mlr2935 two-component response regulator; transcriptional regulator domain-containing protein 737475..738155 Methylobacterium extorquens PA1 5835064 YP_001638160.1 CDS Mext_0677 NC_010172.1 738264 740021 R PFAM: flagellin domain protein; KEGG: rpc:RPC_1104 flagellin-like; flagellin domain-containing protein complement(738264..740021) Methylobacterium extorquens PA1 5835065 YP_001638161.1 CDS Mext_0678 NC_010172.1 740544 740843 R PFAM: type IV pilus assembly PilZ; KEGG: bbt:BBta_7466 hypothetical protein; type IV pilus assembly PilZ complement(740544..740843) Methylobacterium extorquens PA1 5835862 YP_001638162.1 CDS Mext_0679 NC_010172.1 741046 741615 D KEGG: bja:bll7264 hypothetical protein; hypothetical protein 741046..741615 Methylobacterium extorquens PA1 5835863 YP_001638163.1 CDS Mext_0680 NC_010172.1 741788 743041 D PFAM: protein of unknown function DUF1217; KEGG: oan:Oant_4216 protein of unknown function DUF1217; hypothetical protein 741788..743041 Methylobacterium extorquens PA1 5835864 YP_001638164.1 CDS Mext_0681 NC_010172.1 743047 743775 D PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rpe:RPE_1147 flagellar basal body rod protein; flagellar basal body rod protein 743047..743775 Methylobacterium extorquens PA1 5835865 YP_001638165.1 CDS fliI NC_010172.1 743780 745108 D involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 743780..745108 Methylobacterium extorquens PA1 5833759 YP_001638166.1 CDS flgE NC_010172.1 745191 746402 D the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 745191..746402 Methylobacterium extorquens PA1 5833760 YP_001638167.1 CDS flgK NC_010172.1 746481 747944 D with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 746481..747944 Methylobacterium extorquens PA1 5833761 YP_001638168.1 CDS flgL NC_010172.1 747952 749004 D with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar hook-associated protein FlgL 747952..749004 Methylobacterium extorquens PA1 5833762 YP_001638169.1 CDS flaF NC_010172.1 749045 749395 D acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis regulatory protein FlaF 749045..749395 Methylobacterium extorquens PA1 5834370 YP_001638170.1 CDS flbT NC_010172.1 749406 749927 D post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis repressor FlbT 749406..749927 Methylobacterium extorquens PA1 5834371 YP_001638171.1 CDS flgD NC_010172.1 749934 750350 D acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod modification protein 749934..750350 Methylobacterium extorquens PA1 5834372 YP_001638172.1 CDS fliQ NC_010172.1 750417 750683 D FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar biosynthesis protein FliQ 750417..750683 Methylobacterium extorquens PA1 5834373 YP_001638173.1 CDS flhA NC_010172.1 751014 753095 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 751014..753095 Methylobacterium extorquens PA1 5833670 YP_001638174.1 CDS fliR NC_010172.1 753092 753862 D FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium has one thick and several thin flagella; the Bradyrhizobium protein in this cluster are associated with the thin flagella; flagellar biosynthesis protein FliR 753092..753862 Methylobacterium extorquens PA1 5833671 YP_001638175.1 CDS Mext_0692 NC_010172.1 753871 754281 D KEGG: she:Shewmr4_3774 signal recognition particle-docking protein FtsY; hypothetical protein 753871..754281 Methylobacterium extorquens PA1 5833672 YP_001638176.1 CDS Mext_0693 NC_010172.1 754357 754827 D KEGG: bja:bll6849 hypothetical protein; hypothetical protein 754357..754827 Methylobacterium extorquens PA1 5833673 YP_001638177.1 CDS Mext_0694 NC_010172.1 754833 755177 D KEGG: rpe:RPE_1183 hypothetical protein; hypothetical protein 754833..755177 Methylobacterium extorquens PA1 5831945 YP_001638178.1 CDS Mext_0695 NC_010172.1 755181 755627 D KEGG: rpe:RPE_1184 hypothetical protein; hypothetical protein 755181..755627 Methylobacterium extorquens PA1 5831946 YP_001638179.1 CDS Mext_0696 NC_010172.1 755723 756616 D PFAM: dihydrodipicolinate synthetase; KEGG: smd:Smed_4167 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 755723..756616 Methylobacterium extorquens PA1 5831947 YP_001638180.1 CDS Mext_0697 NC_010172.1 756718 757704 D KEGG: bbt:BBta_3048 hypothetical protein; hypothetical protein 756718..757704 Methylobacterium extorquens PA1 5831948 YP_001638181.1 CDS Mext_0698 NC_010172.1 757720 758061 R PFAM: protein of unknown function DUF1491; KEGG: bja:blr3074 hypothetical protein; hypothetical protein complement(757720..758061) Methylobacterium extorquens PA1 5831639 YP_001638182.1 CDS Mext_0699 NC_010172.1 758205 758957 R PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bra:BRADO2709 conserved hypothetical protein; putative peptidoglycan-binding domain-containing protein; peptidoglycan binding domain-containing protein complement(758205..758957) Methylobacterium extorquens PA1 5831640 YP_001638183.1 CDS Mext_0700 NC_010172.1 759001 760947 R KEGG: rpb:RPB_3515 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAS sensor protein complement(759001..760947) Methylobacterium extorquens PA1 5831641 YP_001638184.1 CDS Mext_0701 NC_010172.1 761320 761652 D hypothetical protein 761320..761652 Methylobacterium extorquens PA1 5831642 YP_001638185.1 CDS Mext_0702 NC_010172.1 761803 762846 D TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: smd:Smed_0170 cytochrome d ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II 761803..762846 Methylobacterium extorquens PA1 5833345 YP_001638186.1 CDS Mext_0703 NC_010172.1 763077 764306 R PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_2920 major facilitator superfamily MFS_1 transporter; major facilitator transporter complement(763077..764306) Methylobacterium extorquens PA1 5833346 YP_001638187.1 CDS Mext_0704 NC_010172.1 764366 765547 R PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_1704 major facilitator superfamily MFS_1; major facilitator transporter complement(764366..765547) Methylobacterium extorquens PA1 5833347 YP_001638188.1 CDS Mext_0705 NC_010172.1 765690 766142 D PFAM: helix-turn-helix HxlR type; KEGG: sbl:Sbal_1705 transcriptional regulator, HxlR family; helix-turn-helix HxlR type protein 765690..766142 Methylobacterium extorquens PA1 5833348 YP_001638189.1 CDS Mext_0706 NC_010172.1 766435 768927 D KEGG: rru:Rru_A2520 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; 1A family penicillin-binding protein 766435..768927 Methylobacterium extorquens PA1 5834587 YP_001638190.1 CDS Mext_0707 NC_010172.1 769134 770831 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bra:BRADO2559 putative methyl-accepting chemotaxis protein; chemotaxis sensory transducer protein 769134..770831 Methylobacterium extorquens PA1 5834588 YP_001638191.1 CDS Mext_0708 NC_010172.1 770958 772445 R Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase complement(770958..772445) Methylobacterium extorquens PA1 5834589 YP_001638192.1 CDS Mext_0709 NC_010172.1 772597 773133 D PFAM: protein of unknown function UPF0066; KEGG: xau:Xaut_4390 protein of unknown function UPF0066; hypothetical protein 772597..773133 Methylobacterium extorquens PA1 5834590 YP_001638193.1 CDS Mext_0710 NC_010172.1 773153 774463 R KEGG: rpc:RPC_3454 hypothetical protein; cellulose biosynthesis protein CelD complement(773153..774463) Methylobacterium extorquens PA1 5834591 YP_001638194.1 CDS Mext_0711 NC_010172.1 774672 775742 R PFAM: protein of unknown function DUF201; KEGG: mca:MCA0146 hypothetical protein; hypothetical protein complement(774672..775742) Methylobacterium extorquens PA1 5834592 YP_001638195.1 CDS Mext_0712 NC_010172.1 775986 776417 R PFAM: Protein of unknown function DUF1810; KEGG: mav:MAV_2841 hypothetical protein; hypothetical protein complement(775986..776417) Methylobacterium extorquens PA1 5834593 YP_001638196.1 CDS Mext_0713 NC_010172.1 776479 777405 R PFAM: histone deacetylase superfamily; KEGG: ccr:CC_3648 histone deacetylase family protein; histone deacetylase superfamily protein complement(776479..777405) Methylobacterium extorquens PA1 5834594 YP_001638197.1 CDS Mext_0714 NC_010172.1 777488 778672 D KEGG: mlo:mlr5650 ceramide glucosyltransferase; ceramide glucosyltransferase 777488..778672 Methylobacterium extorquens PA1 5834658 YP_001638198.1 CDS Mext_0715 NC_010172.1 779174 780721 D KEGG: ccr:CC_3699 hypothetical protein; chromosome segregation ATPase-like protein 779174..780721 Methylobacterium extorquens PA1 5834659 YP_001638199.1 CDS Mext_0716 NC_010172.1 780778 781269 D hypothetical protein 780778..781269 Methylobacterium extorquens PA1 5834660 YP_001638200.1 CDS Mext_0717 NC_010172.1 781287 781793 D hypothetical protein 781287..781793 Methylobacterium extorquens PA1 5834661 YP_001638201.1 CDS Mext_0718 NC_010172.1 782013 783389 D TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: gbe:GbCGDNIH1_1893 ethanolamine permease; ethanolamine transporter 782013..783389 Methylobacterium extorquens PA1 5834580 YP_001638202.1 CDS Mext_0719 NC_010172.1 783596 784522 R PFAM: fatty acid desaturase; KEGG: ret:RHE_CH00426 probable fatty acid desaturase protein; fatty acid desaturase complement(783596..784522) Methylobacterium extorquens PA1 5834581 YP_001638203.1 CDS Mext_0720 NC_010172.1 784583 784933 D PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: xcv:XCV2949 putative transcriptional regulator, ArsR family; regulatory protein ArsR 784583..784933 Methylobacterium extorquens PA1 5834582 YP_001638204.1 CDS Mext_0721 NC_010172.1 785544 786236 D PFAM: glutamine amidotransferase class-I; KEGG: ccr:CC_0409 glutamine amidotransferase, class-I family protein; glutamine amidotransferase 785544..786236 Methylobacterium extorquens PA1 5834583 YP_001638205.1 CDS Mext_0722 NC_010172.1 786238 787254 R PFAM: aldo/keto reductase; KEGG: rsh:Rsph17029_3940 aldo/keto reductase; aldo/keto reductase complement(786238..787254) Methylobacterium extorquens PA1 5834181 YP_001638206.1 CDS Mext_0723 NC_010172.1 787402 788313 D PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: pde:Pden_3330 AraC-type transcriptional regulator domain protein; AraC-like transcriptional regulator 787402..788313 Methylobacterium extorquens PA1 5834182 YP_001638207.1 CDS Mext_0724 NC_010172.1 788567 789793 R PFAM: monooxygenase FAD-binding; KEGG: xac:XAC1667 oxidoreductase; FAD-binding monooxygenase complement(788567..789793) Methylobacterium extorquens PA1 5834184 YP_001638208.1 CDS Mext_0725 NC_010172.1 790004 790585 D KEGG: xau:Xaut_0479 DedA family; DedA family protein 790004..790585 Methylobacterium extorquens PA1 5834164 YP_001638209.1 CDS Mext_0726 NC_010172.1 790582 791094 D PFAM: Disulphide bond formation protein DsbB; KEGG: atc:AGR_L_2587 hypothetical protein; disulfide bond formation protein DsbB 790582..791094 Methylobacterium extorquens PA1 5834165 YP_001638210.1 CDS Mext_0727 NC_010172.1 791058 791675 R PFAM: Putative ParB-like nuclease; KEGG: bbt:BBta_3524 hypothetical protein; putative ParB-like nuclease complement(791058..791675) Methylobacterium extorquens PA1 5834166 YP_001638211.1 CDS Mext_0728 NC_010172.1 792058 793248 D PFAM: acyltransferase 3; KEGG: mes:Meso_0084 acyltransferase 3; acyltransferase 3 792058..793248 Methylobacterium extorquens PA1 5834079 YP_001638212.1 CDS Mext_0729 NC_010172.1 793264 793686 R PFAM: protein of unknown function DUF55; KEGG: xau:Xaut_1108 protein of unknown function DUF55; hypothetical protein complement(793264..793686) Methylobacterium extorquens PA1 5834080 YP_001638213.1 CDS gpsA NC_010172.1 793788 794813 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(793788..794813) Methylobacterium extorquens PA1 5834081 YP_001638214.1 CDS Mext_0731 NC_010172.1 795359 796834 D KEGG: mmr:Mmar10_2039 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein 795359..796834 Methylobacterium extorquens PA1 5834082 YP_001638215.1 CDS Mext_0732 NC_010172.1 796851 797894 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease complement(796851..797894) Methylobacterium extorquens PA1 5834026 YP_001638216.1 CDS Mext_0733 NC_010172.1 798072 798782 D KEGG: xau:Xaut_1159 uroporphyrinogen III synthase HEM4; uroporphyrinogen III synthase HEM4 798072..798782 Methylobacterium extorquens PA1 5834027 YP_001638217.1 CDS Mext_0734 NC_010172.1 798923 801229 D KEGG: lma:LmjF35.0520 proteophosphoglycan ppg4; hypothetical protein 798923..801229 Methylobacterium extorquens PA1 5834028 YP_001638218.1 CDS Mext_0735 NC_010172.1 801347 802882 D PFAM: HemY domain protein; KEGG: bbt:BBta_0286 putative exported protein of unknown function with HemY domain (porphyrin biosynthesis); HemY domain-containing protein 801347..802882 Methylobacterium extorquens PA1 5834029 YP_001638219.1 CDS Mext_0736 NC_010172.1 803469 803651 D KEGG: ccr:CC_0423 hypothetical protein; hypothetical protein 803469..803651 Methylobacterium extorquens PA1 5833983 YP_001638220.1 CDS Mext_0737 NC_010172.1 803697 804410 D KEGG: mlo:mlr1763 hypothetical protein; hypothetical protein 803697..804410 Methylobacterium extorquens PA1 5833984 YP_001638221.1 CDS Mext_0738 NC_010172.1 804523 805113 D hypothetical protein 804523..805113 Methylobacterium extorquens PA1 5834602 YP_001638222.1 CDS Mext_0739 NC_010172.1 805320 805862 D hypothetical protein 805320..805862 Methylobacterium extorquens PA1 5834603 YP_001638223.1 CDS groES NC_010172.1 806340 806627 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 806340..806627 Methylobacterium extorquens PA1 5834604 YP_001638224.1 CDS Mext_0741 NC_010172.1 806723 808369 D TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: rpd:RPD_4127 chaperonin GroEL; chaperonin GroEL 806723..808369 Methylobacterium extorquens PA1 5834605 YP_001638225.1 CDS Mext_0742 NC_010172.1 808552 809130 D KEGG: acr:Acry_3273 helicase, RecD/TraA family; recombinase D 808552..809130 Methylobacterium extorquens PA1 5834662 YP_001638226.1 CDS Mext_0743 NC_010172.1 809150 810040 D PFAM: protein of unknown function DUF955; KEGG: bbt:BBta_p0024 hypothetical protein; hypothetical protein 809150..810040 Methylobacterium extorquens PA1 5834663 YP_001638227.1 CDS Mext_0744 NC_010172.1 810113 810403 D hypothetical protein 810113..810403 Methylobacterium extorquens PA1 5834664 YP_001638228.1 CDS Mext_0745 NC_010172.1 810357 810992 R PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: xau:Xaut_4606 plasmid pRiA4b ORF-3 family protein; plasmid pRiA4b ORF-3 family protein complement(810357..810992) Methylobacterium extorquens PA1 5834665 YP_001638229.1 CDS Mext_0746 NC_010172.1 811179 812141 D PFAM: protein of unknown function DUF262; KEGG: har:HEAR0699 hypothetical protein; hypothetical protein 811179..812141 Methylobacterium extorquens PA1 5832304 YP_001638230.1 CDS Mext_0747 NC_010172.1 813860 814405 D PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: swi:Swit_5066 resolvase, N-terminal domain; resolvase domain-containing protein 813860..814405 Methylobacterium extorquens PA1 5832305 YP_001638231.1 CDS Mext_0748 NC_010172.1 814559 815488 R PFAM: alpha/beta hydrolase fold; KEGG: mms:mma_1873 carboxyl esterase, a/b hydrolase; alpha/beta hydrolase fold protein complement(814559..815488) Methylobacterium extorquens PA1 5832306 YP_001638232.1 CDS Mext_0749 NC_010172.1 815485 815820 R KEGG: bbt:BBta_1727 hypothetical protein; hypothetical protein complement(815485..815820) Methylobacterium extorquens PA1 5832307 YP_001638233.1 CDS Mext_0750 NC_010172.1 815939 816544 D KEGG: pau:PA14_15710 hypothetical protein; hypothetical protein 815939..816544 Methylobacterium extorquens PA1 5830942 YP_001638234.1 CDS Mext_0751 NC_010172.1 816718 817197 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: mag:amb2664 hypothetical protein; cupin complement(816718..817197) Methylobacterium extorquens PA1 5830943 YP_001638235.1 CDS Mext_0752 NC_010172.1 817292 818905 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bra:BRADO3399 putative sensor histidine kinase with two PAS and a response regulator receiver domains; ATPase domain-containing protein 817292..818905 Methylobacterium extorquens PA1 5830944 YP_001638236.1 CDS Mext_0753 NC_010172.1 819250 819753 R KEGG: swi:Swit_3326 hypothetical protein; hypothetical protein complement(819250..819753) Methylobacterium extorquens PA1 5830945 YP_001638237.1 CDS Mext_0754 NC_010172.1 819931 820854 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_3647 transcriptional regulator, LysR family; LysR substrate-binding protein 819931..820854 Methylobacterium extorquens PA1 5833563 YP_001638238.1 CDS Mext_0755 NC_010172.1 820946 821698 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll2747 3-oxoacyl-[acyl-carrier-protein] reductase; short-chain dehydrogenase/reductase SDR 820946..821698 Methylobacterium extorquens PA1 5833564 YP_001638239.1 CDS Mext_0756 NC_010172.1 821759 822634 D PFAM: beta-lactamase domain protein; KEGG: gbe:GbCGDNIH1_1166 metal-dependent hydrolase; beta-lactamase domain-containing protein 821759..822634 Methylobacterium extorquens PA1 5833565 YP_001638240.1 CDS Mext_0757 NC_010172.1 822676 823002 D PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: mlo:mlr3059 hypothetical protein; stress responsive alpha-beta barrel domain-containing protein 822676..823002 Methylobacterium extorquens PA1 5833566 YP_001638241.1 CDS Mext_0758 NC_010172.1 822995 823954 D PFAM: luciferase family protein; KEGG: psb:Psyr_3064 luciferase; luciferase family protein 822995..823954 Methylobacterium extorquens PA1 5833043 YP_001638242.1 CDS Mext_0759 NC_010172.1 824397 824678 R hypothetical protein complement(824397..824678) Methylobacterium extorquens PA1 5833044 YP_001638243.1 CDS Mext_0760 NC_010172.1 824866 825252 R KEGG: pla:Plav_0324 hypothetical protein; hypothetical protein complement(824866..825252) Methylobacterium extorquens PA1 5833045 YP_001638244.1 CDS Mext_0761 NC_010172.1 825284 825946 R KEGG: xau:Xaut_2240 hypothetical protein; hypothetical protein complement(825284..825946) Methylobacterium extorquens PA1 5833046 YP_001638245.1 CDS Mext_0762 NC_010172.1 826288 827118 R PFAM: transposase IS4 family protein; KEGG: acr:Acry_3208 transposase, IS4 family protein; transposase IS4 family protein complement(826288..827118) Methylobacterium extorquens PA1 5833330 YP_001638246.1 CDS Mext_0763 NC_010172.1 827131 827562 R hypothetical protein complement(827131..827562) Methylobacterium extorquens PA1 5833331 YP_001638247.1 CDS Mext_0764 NC_010172.1 827809 828051 D hypothetical protein 827809..828051 Methylobacterium extorquens PA1 5833332 YP_001638248.1 CDS Mext_0765 NC_010172.1 828330 828665 R PFAM: HNH endonuclease; KEGG: mlo:msr8735 hypothetical protein; HNH endonuclease complement(828330..828665) Methylobacterium extorquens PA1 5833333 YP_001638249.1 CDS Mext_0766 NC_010172.1 828799 829062 D hypothetical protein 828799..829062 Methylobacterium extorquens PA1 5832674 YP_001638250.1 CDS Mext_0767 NC_010172.1 829517 829888 R PFAM: transposase IS4 family protein; KEGG: gbe:GbCGDNIH1_1045 transposase; transposase IS4 family protein complement(829517..829888) Methylobacterium extorquens PA1 5832675 YP_001638251.1 CDS Mext_0768 NC_010172.1 829885 830286 R KEGG: gox:GOX2659 transposase; transposase complement(829885..830286) Methylobacterium extorquens PA1 5832676 YP_001638252.1 CDS Mext_0771 NC_010172.1 831654 832361 D KEGG: reh:H16_A2132 hydroxypyruvate reductase; hydroxypyruvate reductase 831654..832361 Methylobacterium extorquens PA1 5832719 YP_001638253.1 CDS Mext_0772 NC_010172.1 832740 833504 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bra:BRADO3435 putative transcriptional regulatory protein, Crp/Fnr family; cyclic nucleotide-binding protein 832740..833504 Methylobacterium extorquens PA1 5832720 YP_001638254.1 CDS Mext_0773 NC_010172.1 833618 834067 R PFAM: response regulator receiver; KEGG: rpa:RPA2074 response regulator receiver (CheY-like protein); response regulator receiver complement(833618..834067) Methylobacterium extorquens PA1 5832721 YP_001638255.1 CDS Mext_0774 NC_010172.1 834746 835036 D KEGG: rpd:RPD_2136 hypothetical protein; hypothetical protein 834746..835036 Methylobacterium extorquens PA1 5833249 YP_001638256.1 CDS Mext_0775 NC_010172.1 835292 835669 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nar:Saro_0439 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(835292..835669) Methylobacterium extorquens PA1 5833250 YP_001638257.1 CDS Mext_0776 NC_010172.1 836223 836738 D hypothetical protein 836223..836738 Methylobacterium extorquens PA1 5833251 YP_001638258.1 CDS Mext_0777 NC_010172.1 836806 838206 D PFAM: cytochrome P450; KEGG: bha:BH0579 cytochrome P450 hydroxylase; cytochrome P450 836806..838206 Methylobacterium extorquens PA1 5833252 YP_001638259.1 CDS Mext_0779 NC_010172.1 838897 839517 R PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: mlo:mll0364 hypothetical protein; 5-formyltetrahydrofolate cyclo-ligase complement(838897..839517) Methylobacterium extorquens PA1 5833798 YP_001638260.1 CDS Mext_0780 NC_010172.1 839596 839922 R hypothetical protein complement(839596..839922) Methylobacterium extorquens PA1 5833799 YP_001638261.1 CDS Mext_0781 NC_010172.1 840487 840744 R hypothetical protein complement(840487..840744) Methylobacterium extorquens PA1 5833800 YP_001638262.1 CDS Mext_0782 NC_010172.1 842434 842670 R hypothetical protein complement(842434..842670) Methylobacterium extorquens PA1 5832102 YP_001638263.1 CDS Mext_0783 NC_010172.1 842667 843797 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bra:BRADO3435 putative transcriptional regulatory protein, Crp/Fnr family; cyclic nucleotide-binding protein complement(842667..843797) Methylobacterium extorquens PA1 5832103 YP_001638264.1 CDS Mext_0784 NC_010172.1 844067 844780 D KEGG: mlo:mlr2110 hypothetical protein; hypothetical protein 844067..844780 Methylobacterium extorquens PA1 5832104 YP_001638265.1 CDS Mext_0785 NC_010172.1 844780 845037 D hypothetical protein 844780..845037 Methylobacterium extorquens PA1 5832105 YP_001638266.1 CDS Mext_0786 NC_010172.1 845085 845390 D hypothetical protein 845085..845390 Methylobacterium extorquens PA1 5831254 YP_001638267.1 CDS Mext_0787 NC_010172.1 845433 845666 R hypothetical protein complement(845433..845666) Methylobacterium extorquens PA1 5831255 YP_001638268.1 CDS Mext_0788 NC_010172.1 845979 846689 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: mlo:mlr2110 hypothetical protein; cyclic nucleotide-binding protein 845979..846689 Methylobacterium extorquens PA1 5831256 YP_001638269.1 CDS Mext_0789 NC_010172.1 847347 848069 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: mlo:mlr2110 hypothetical protein; cyclic nucleotide-binding protein 847347..848069 Methylobacterium extorquens PA1 5831257 YP_001638270.1 CDS Mext_0790 NC_010172.1 848157 848393 D KEGG: atc:AGR_pAT_694 hypothetical protein; hypothetical protein 848157..848393 Methylobacterium extorquens PA1 5831744 YP_001638271.1 CDS Mext_0791 NC_010172.1 848604 849233 D PFAM: integrase family protein; KEGG: ccr:CC_1766 hypothetical protein; integrase family protein 848604..849233 Methylobacterium extorquens PA1 5831745 YP_001638272.1 CDS Mext_0792 NC_010172.1 849779 850762 D PFAM: protein of unknown function DUF323; KEGG: bja:bll4742 hypothetical protein; hypothetical protein 849779..850762 Methylobacterium extorquens PA1 5831746 YP_001638273.1 CDS Mext_0793 NC_010172.1 850759 852468 D PFAM: sulfatase; KEGG: smd:Smed_1239 sulfatase; sulfatase 850759..852468 Methylobacterium extorquens PA1 5831747 YP_001638274.1 CDS Mext_0797 NC_010172.1 854058 854219 D hypothetical protein 854058..854219 Methylobacterium extorquens PA1 5831760 YP_001638275.1 CDS Mext_0798 NC_010172.1 855040 856914 D KEGG: xac:XAC3730 methyltransferase; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein 855040..856914 Methylobacterium extorquens PA1 5831761 YP_001638276.1 CDS Mext_0799 NC_010172.1 857983 858207 R KEGG: bur:Bcep18194_B2465 zinc-containing alcohol dehydrogenase superfamily; zinc-containing alcohol dehydrogenase superfamily protein complement(857983..858207) Methylobacterium extorquens PA1 5831475 YP_001638277.1 CDS Mext_0801 NC_010172.1 859258 859461 D KEGG: rle:RL3611 putative two-component response regulator transcriptional regulatory protein; HD-GYP domain-containing protein 859258..859461 Methylobacterium extorquens PA1 5831477 YP_001638278.1 CDS Mext_0802 NC_010172.1 859673 862870 R KEGG: nha:Nham_0235 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein complement(859673..862870) Methylobacterium extorquens PA1 5831478 YP_001638279.1 CDS Mext_0803 NC_010172.1 864397 864615 R hypothetical protein complement(864397..864615) Methylobacterium extorquens PA1 5832179 YP_001638280.1 CDS Mext_0804 NC_010172.1 865161 866618 R TIGRFAM: phage uncharacterized protein; PFAM: protein of unknown function DUF264; KEGG: nha:Nham_0801 phage uncharacterized protein-like; phage protein complement(865161..866618) Methylobacterium extorquens PA1 5832180 YP_001638281.1 CDS Mext_0805 NC_010172.1 866630 867184 R KEGG: nha:Nham_0815 hypothetical protein; hypothetical protein complement(866630..867184) Methylobacterium extorquens PA1 5832181 YP_001638282.1 CDS Mext_0806 NC_010172.1 867177 868643 R PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; KEGG: nar:Saro_1452 DNA methylase N-4/N-6; DNA methylase N-4/N-6 domain-containing protein complement(867177..868643) Methylobacterium extorquens PA1 5832182 YP_001638283.1 CDS Mext_0807 NC_010172.1 869555 869836 D hypothetical protein 869555..869836 Methylobacterium extorquens PA1 5831132 YP_001638284.1 CDS Mext_0808 NC_010172.1 869867 870097 R hypothetical protein complement(869867..870097) Methylobacterium extorquens PA1 5831133 YP_001638285.1 CDS Mext_0809 NC_010172.1 870571 872724 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bbt:BBta_0969 putative methyl-accepting chemotaxis protein; chemotaxis sensory transducer protein 870571..872724 Methylobacterium extorquens PA1 5831134 YP_001638286.1 CDS Mext_0810 NC_010172.1 872848 873498 D hypothetical protein 872848..873498 Methylobacterium extorquens PA1 5831135 YP_001638287.1 CDS Mext_0811 NC_010172.1 874583 876727 D PFAM: helicase domain protein; KEGG: gox:GOX1762 putative RNA helicase; helicase domain-containing protein 874583..876727 Methylobacterium extorquens PA1 5831567 YP_001638288.1 CDS Mext_0812 NC_010172.1 883370 883660 D hypothetical protein 883370..883660 Methylobacterium extorquens PA1 5832875 YP_001638289.1 CDS Mext_0813 NC_010172.1 883759 886074 D PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: sen:SACE_5346 RNA binding S1:resolvase, RNase H-like fold; RNA-binding S1 domain-containing protein 883759..886074 Methylobacterium extorquens PA1 5832321 YP_001638290.1 CDS Mext_0814 NC_010172.1 886061 886381 R hypothetical protein complement(886061..886381) Methylobacterium extorquens PA1 5832322 YP_001638291.1 CDS Mext_0815 NC_010172.1 886927 887580 D PFAM: ABC transporter related; KEGG: xau:Xaut_3811 ABC transporter related; ABC transporter-like protein 886927..887580 Methylobacterium extorquens PA1 5832323 YP_001638292.1 CDS Mext_0816 NC_010172.1 887730 888974 D KEGG: xau:Xaut_3812 capsule polysaccharide export protein-like protein; capsule polysaccharide export protein-like protein 887730..888974 Methylobacterium extorquens PA1 5833178 YP_001638293.1 CDS Mext_0817 NC_010172.1 888983 889699 R KEGG: atc:AGR_pAT_724 hypothetical protein; hypothetical protein complement(888983..889699) Methylobacterium extorquens PA1 5833179 YP_001638294.1 CDS Mext_0818 NC_010172.1 889737 890042 R KEGG: rle:RL1165 hypothetical protein; hypothetical protein complement(889737..890042) Methylobacterium extorquens PA1 5833180 YP_001638295.1 CDS flhA NC_010172.1 890244 892385 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 890244..892385 Methylobacterium extorquens PA1 5833181 YP_001638296.1 CDS Mext_0820 NC_010172.1 892491 894317 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: rpe:RPE_1545 methyl-accepting chemotaxis sensory transducer; chemotaxis sensory transducer protein 892491..894317 Methylobacterium extorquens PA1 5833695 YP_001638297.1 CDS Mext_0821 NC_010172.1 894842 895894 R KEGG: oan:Oant_1858 hypothetical protein; hypothetical protein complement(894842..895894) Methylobacterium extorquens PA1 5833696 YP_001638298.1 CDS Mext_0822 NC_010172.1 896251 896655 R TIGRFAM: flagellar export protein FliJ; KEGG: bja:blr2202 hypothetical protein; flagellar export protein FliJ complement(896251..896655) Methylobacterium extorquens PA1 5833697 YP_001638299.1 CDS fliI NC_010172.1 896751 898106 R involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase complement(896751..898106) Methylobacterium extorquens PA1 5833698 YP_001638300.1 CDS Mext_0824 NC_010172.1 898545 899246 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sme:SMc00654 response regulator,controls chromosomal replication initiation protein; response regulator receiver 898545..899246 Methylobacterium extorquens PA1 5831136 YP_001638301.1 CDS Mext_0825 NC_010172.1 899325 899576 R KEGG: rpe:RPE_3702 hypothetical protein; hypothetical protein complement(899325..899576) Methylobacterium extorquens PA1 5831137 YP_001638302.1 CDS Mext_0826 NC_010172.1 899610 900236 R KEGG: pen:PSEEN4077 chloramphenicol acetyltransferase; chloramphenicol acetyltransferase complement(899610..900236) Methylobacterium extorquens PA1 5831138 YP_001638303.1 CDS Mext_0827 NC_010172.1 900312 902645 D NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 900312..902645 Methylobacterium extorquens PA1 5831139 YP_001638304.1 CDS Mext_0828 NC_010172.1 902747 904186 D PFAM: Acetamidase/Formamidase; KEGG: mpt:Mpe_A3600 hypothetical protein; acetamidase/formamidase 902747..904186 Methylobacterium extorquens PA1 5832714 YP_001638305.1 CDS Mext_0829 NC_010172.1 904360 904539 R KEGG: mes:Meso_1574 hypothetical protein; hypothetical protein complement(904360..904539) Methylobacterium extorquens PA1 5832715 YP_001638306.1 CDS Mext_0830 NC_010172.1 904619 905503 R KEGG: sun:SUN_1733 hypothetical protein; hypothetical protein complement(904619..905503) Methylobacterium extorquens PA1 5832716 YP_001638307.1 CDS Mext_0831 NC_010172.1 905500 907575 R PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: rru:Rru_A2348 glycosyl transferase; glycosyl transferase family protein complement(905500..907575) Methylobacterium extorquens PA1 5832717 YP_001638308.1 CDS Mext_0832 NC_010172.1 907579 909600 R KEGG: mpt:Mpe_A0733 hypothetical protein; hypothetical protein complement(907579..909600) Methylobacterium extorquens PA1 5832523 YP_001638309.1 CDS Mext_0833 NC_010172.1 909600 910298 R hypothetical protein complement(909600..910298) Methylobacterium extorquens PA1 5832524 YP_001638310.1 CDS Mext_0834 NC_010172.1 910489 911874 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: oan:Oant_0136 peptidase M20; hypothetical protein complement(910489..911874) Methylobacterium extorquens PA1 5832525 YP_001638311.1 CDS Mext_0835 NC_010172.1 912163 912687 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bra:BRADO5691 putative xanthine dehydrogenase YagT-like, iron-sulfur binding subunit; 2Fe-2S iron-sulfur cluster binding domain-containing protein 912163..912687 Methylobacterium extorquens PA1 5832526 YP_001638312.1 CDS Mext_0836 NC_010172.1 912684 913700 D PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: nha:Nham_1040 molybdopterin dehydrogenase, FAD-binding; FAD-binding molybdopterin dehydrogenase 912684..913700 Methylobacterium extorquens PA1 5833474 YP_001638313.1 CDS Mext_0837 NC_010172.1 913710 915971 D PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: swi:Swit_5315 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 913710..915971 Methylobacterium extorquens PA1 5833475 YP_001638314.1 CDS Mext_0838 NC_010172.1 917011 917334 D PFAM: Camphor resistance CrcB protein; KEGG: hne:HNE_1001 CrcB protein; camphor resistance CrcB protein 917011..917334 Methylobacterium extorquens PA1 5833476 YP_001638315.1 CDS Mext_0839 NC_010172.1 917346 917783 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: atc:AGR_L_3039 hypothetical protein; hypothetical protein 917346..917783 Methylobacterium extorquens PA1 5833477 YP_001638316.1 CDS Mext_0840 NC_010172.1 917783 918445 D PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: xau:Xaut_0653 peptidase M15D VanX D-ala-D-ala dipeptidase; peptidase M15D vanX D-ala-D-ala dipeptidase 917783..918445 Methylobacterium extorquens PA1 5831550 YP_001638317.1 CDS Mext_0841 NC_010172.1 918614 918889 D hypothetical protein 918614..918889 Methylobacterium extorquens PA1 5831551 YP_001638318.1 CDS Mext_0842 NC_010172.1 918886 919212 D KEGG: rpc:RPC_3616 hypothetical protein; hypothetical protein 918886..919212 Methylobacterium extorquens PA1 5831552 YP_001638319.1 CDS Mext_0843 NC_010172.1 919217 919555 R KEGG: nha:Nham_3843 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(919217..919555) Methylobacterium extorquens PA1 5831553 YP_001638320.1 CDS Mext_0844 NC_010172.1 919662 920303 R PFAM: regulatory protein MarR; KEGG: xau:Xaut_1908 transcriptional regulator, MarR family; regulatory protein MarR complement(919662..920303) Methylobacterium extorquens PA1 5833334 YP_001638321.1 CDS Mext_0845 NC_010172.1 920550 922727 D PFAM: glycosyl transferase family 2; KEGG: ter:Tery_2707 glycosyl transferase, family 2; glycosyl transferase family protein 920550..922727 Methylobacterium extorquens PA1 5833335 YP_001638322.1 CDS Mext_0846 NC_010172.1 922759 923526 D TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: tbd:Tbd_1881 alpha-D-glucose-1-phosphate cytidylyltransferase; glucose-1-phosphate cytidylyltransferase 922759..923526 Methylobacterium extorquens PA1 5833336 YP_001638323.1 CDS Mext_0847 NC_010172.1 923526 924632 D TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: tbd:Tbd_1880 CDP-glucose 4,6-dehydratase; CDP-glucose 4,6-dehydratase 923526..924632 Methylobacterium extorquens PA1 5833337 YP_001638324.1 CDS Mext_0848 NC_010172.1 924629 925858 D PFAM: Methyltransferase type 11; Methyltransferase type 12; Methyltransferase domain protein; C-methyltransferase; KEGG: rpe:RPE_4255 C-methyltransferase; C-methyltransferase 924629..925858 Methylobacterium extorquens PA1 5831708 YP_001638325.1 CDS Mext_0849 NC_010172.1 926043 926576 D PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: bms:BRA0437 dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase 926043..926576 Methylobacterium extorquens PA1 5831709 YP_001638326.1 CDS Mext_0850 NC_010172.1 926573 927613 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: pla:Plav_3348 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 926573..927613 Methylobacterium extorquens PA1 5831710 YP_001638327.1 CDS Mext_0851 NC_010172.1 927588 927986 R PFAM: response regulator receiver; KEGG: ret:RHE_CH02917 probable two-component response regulator protein; response regulator receiver complement(927588..927986) Methylobacterium extorquens PA1 5831711 YP_001638328.1 CDS Mext_0852 NC_010172.1 928238 929524 R TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: gox:GOX0719 adenosylmethionine--8-amino-7-oxononanoate transaminase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(928238..929524) Methylobacterium extorquens PA1 5832722 YP_001638329.1 CDS Mext_0853 NC_010172.1 929684 932563 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase complement(929684..932563) Methylobacterium extorquens PA1 5832723 YP_001638330.1 CDS Mext_0854 NC_010172.1 932704 933066 R part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H complement(932704..933066) Methylobacterium extorquens PA1 5832724 YP_001638331.1 CDS Mext_0855 NC_010172.1 933091 934269 R TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rpa:RPA3848 glycine cleavage system protein T2; glycine cleavage system T protein complement(933091..934269) Methylobacterium extorquens PA1 5832725 YP_001638332.1 CDS Mext_0856 NC_010172.1 934578 934808 R hypothetical protein complement(934578..934808) Methylobacterium extorquens PA1 5831273 YP_001638333.1 CDS Mext_0857 NC_010172.1 934915 936066 D KEGG: ccr:CC_1576 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class V; aminotransferase class I and II; 8-amino-7-oxononanoate synthase 934915..936066 Methylobacterium extorquens PA1 5831274 YP_001638334.1 CDS Mext_0858 NC_010172.1 936073 936933 R PFAM: NLP/P60 protein; KEGG: rpe:RPE_3759 NLP/P60 protein; NLP/P60 protein complement(936073..936933) Methylobacterium extorquens PA1 5831275 YP_001638335.1 CDS Mext_0859 NC_010172.1 937102 937617 D KEGG: bbt:BBta_3892 hypothetical protein; hypothetical protein 937102..937617 Methylobacterium extorquens PA1 5831140 YP_001638336.1 CDS Mext_0860 NC_010172.1 937677 938363 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: acr:Acry_1568 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(937677..938363) Methylobacterium extorquens PA1 5831141 YP_001638337.1 CDS Mext_0861 NC_010172.1 938426 939142 R PFAM: MgtC/SapB transporter; KEGG: rpb:RPB_4554 MgtC/SapB transporter; MgtC/SapB transporter complement(938426..939142) Methylobacterium extorquens PA1 5831142 YP_001638338.1 CDS Mext_0862 NC_010172.1 939434 940426 D PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: rsh:Rsph17029_4008 ATPase associated with various cellular activities, AAA_3; ATPase 939434..940426 Methylobacterium extorquens PA1 5831143 YP_001638339.1 CDS Mext_0863 NC_010172.1 940432 941361 D KEGG: rde:RD1_0873 hypothetical protein; hypothetical protein 940432..941361 Methylobacterium extorquens PA1 5831884 YP_001638340.1 CDS Mext_0864 NC_010172.1 941536 941997 D KEGG: mca:MCA3084 hypothetical protein; hypothetical protein 941536..941997 Methylobacterium extorquens PA1 5831885 YP_001638341.1 CDS Mext_0865 NC_010172.1 942003 943022 D PFAM: von Willebrand factor type A; KEGG: rsh:Rsph17029_4011 von Willebrand factor, type A; von Willebrand factor type A 942003..943022 Methylobacterium extorquens PA1 5831886 YP_001638342.1 CDS Mext_0866 NC_010172.1 943034 943957 D PFAM: von Willebrand factor type A; KEGG: rsp:RSP_3280 hypothetical protein; von Willebrand factor type A 943034..943957 Methylobacterium extorquens PA1 5831887 YP_001638343.1 CDS Mext_0867 NC_010172.1 943957 944895 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; KEGG: maq:Maqu_1949 TPR repeat-containing protein; hypothetical protein 943957..944895 Methylobacterium extorquens PA1 5832804 YP_001638344.1 CDS Mext_0868 NC_010172.1 944889 946211 D KEGG: pde:Pden_1131 hypothetical protein; hypothetical protein 944889..946211 Methylobacterium extorquens PA1 5832805 YP_001638345.1 CDS Mext_0869 NC_010172.1 946299 947393 D KEGG: psb:Psyr_1393 hypothetical protein; hypothetical protein 946299..947393 Methylobacterium extorquens PA1 5832806 YP_001638346.1 CDS Mext_0870 NC_010172.1 947485 948528 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: xau:Xaut_1906 protein of unknown function DUF6 transmembrane; hypothetical protein 947485..948528 Methylobacterium extorquens PA1 5832807 YP_001638347.1 CDS Mext_0871 NC_010172.1 948498 948977 R KEGG: nha:Nham_0234 hypothetical protein; hypothetical protein complement(948498..948977) Methylobacterium extorquens PA1 5835724 YP_001638348.1 CDS Mext_0872 NC_010172.1 949051 950106 R KEGG: rpe:RPE_0517 OmpA/MotB domain protein; hypothetical protein complement(949051..950106) Methylobacterium extorquens PA1 5835725 YP_001638349.1 CDS Mext_0873 NC_010172.1 950352 950768 R TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: pla:Plav_1522 methionine-R-sulfoxide reductase; methionine-R-sulfoxide reductase complement(950352..950768) Methylobacterium extorquens PA1 5835726 YP_001638350.1 CDS Mext_0874 NC_010172.1 950872 952038 R PFAM: ribonuclease BN; KEGG: bbt:BBta_2397 putative membrane protein of unknown function with ribonuclease domain; ribonuclease BN complement(950872..952038) Methylobacterium extorquens PA1 5835727 YP_001638351.1 CDS Mext_0875 NC_010172.1 952171 953637 R KEGG: oan:Oant_3652 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein complement(952171..953637) Methylobacterium extorquens PA1 5834282 YP_001638352.1 CDS Mext_0876 NC_010172.1 953841 955373 R catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase complement(953841..955373) Methylobacterium extorquens PA1 5834283 YP_001638353.1 CDS Mext_0877 NC_010172.1 955517 955957 R hypothetical protein complement(955517..955957) Methylobacterium extorquens PA1 5834284 YP_001638354.1 CDS Mext_0878 NC_010172.1 956311 957222 D PFAM: Collagen triple helix repeat; KEGG: rpc:RPC_2599 collagen triple helix repeat; triple helix repeat-containing collagen 956311..957222 Methylobacterium extorquens PA1 5834285 YP_001638355.1 CDS Mext_0879 NC_010172.1 957235 958458 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; KEGG: nha:Nham_2553 HI0933-like protein; hypothetical protein complement(957235..958458) Methylobacterium extorquens PA1 5834278 YP_001638356.1 CDS Mext_0880 NC_010172.1 958773 959798 D PFAM: Integral membrane protein TerC; KEGG: atc:AGR_C_3415 putative transmembrane transport protein; integral membrane protein TerC 958773..959798 Methylobacterium extorquens PA1 5834279 YP_001638357.1 CDS Mext_0881 NC_010172.1 959940 960242 D hypothetical protein 959940..960242 Methylobacterium extorquens PA1 5834280 YP_001638358.1 CDS Mext_0882 NC_010172.1 960319 960897 R TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: jan:Jann_1867 peptidase C56, PfpI; PfpI family intracellular peptidase complement(960319..960897) Methylobacterium extorquens PA1 5834281 YP_001638359.1 CDS Mext_0883 NC_010172.1 961081 961302 D KEGG: osa:4343816 Os07g0600000; hypothetical protein 961081..961302 Methylobacterium extorquens PA1 5835770 YP_001638360.1 CDS Mext_0884 NC_010172.1 961478 961912 D KEGG: rpb:RPB_2921 hypothetical protein; hypothetical protein 961478..961912 Methylobacterium extorquens PA1 5835771 YP_001638361.1 CDS Mext_0885 NC_010172.1 961971 962417 R hypothetical protein complement(961971..962417) Methylobacterium extorquens PA1 5835772 YP_001638362.1 CDS Mext_0886 NC_010172.1 962706 962915 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: atc:AGR_L_3376 hypothetical protein; DNA-binding cold-shock protein 962706..962915 Methylobacterium extorquens PA1 5835773 YP_001638363.1 CDS Mext_0887 NC_010172.1 963123 963350 D hypothetical protein 963123..963350 Methylobacterium extorquens PA1 5835854 YP_001638364.1 CDS Mext_0888 NC_010172.1 963520 963981 R PFAM: conserved hypothetical protein; KEGG: rpe:RPE_3414 uncharacterised conserved protein UCP032025; hypothetical protein complement(963520..963981) Methylobacterium extorquens PA1 5835855 YP_001638365.1 CDS Mext_0889 NC_010172.1 964064 965263 R KEGG: bbt:BBta_5560 hypothetical protein; hypothetical protein complement(964064..965263) Methylobacterium extorquens PA1 5835856 YP_001638366.1 CDS Mext_0890 NC_010172.1 965432 966637 D PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_4111 major facilitator superfamily MFS_1; major facilitator transporter 965432..966637 Methylobacterium extorquens PA1 5835857 YP_001638367.1 CDS Mext_0891 NC_010172.1 966821 967969 D PFAM: protein of unknown function DUF140; KEGG: rpb:RPB_1627 protein of unknown function DUF140; hypothetical protein 966821..967969 Methylobacterium extorquens PA1 5835828 YP_001638368.1 CDS Mext_0892 NC_010172.1 968003 968839 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_4114 ABC transporter related; ABC transporter-like protein 968003..968839 Methylobacterium extorquens PA1 5835829 YP_001638369.1 CDS Mext_0893 NC_010172.1 968911 969993 D PFAM: Mammalian cell entry related domain protein; KEGG: oan:Oant_2109 mammalian cell entry related domain protein; hypothetical protein 968911..969993 Methylobacterium extorquens PA1 5835830 YP_001638370.1 CDS Mext_0894 NC_010172.1 970114 970737 D KEGG: smd:Smed_1551 protein of unknown function DUF330; hypothetical protein 970114..970737 Methylobacterium extorquens PA1 5835831 YP_001638371.1 CDS Mext_0895 NC_010172.1 970802 971620 R PFAM: inositol monophosphatase; KEGG: rpa:RPA1156 putative myo-inositol monophosphatase 2 family protein; inositol monophosphatase complement(970802..971620) Methylobacterium extorquens PA1 5834175 YP_001638372.1 CDS Mext_0896 NC_010172.1 971986 972486 D KEGG: bov:BOV_0418 hypothetical protein; hypothetical protein 971986..972486 Methylobacterium extorquens PA1 5834176 YP_001638373.1 CDS Mext_0897 NC_010172.1 972733 973683 R TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: bja:bll7521 4-hydroxybenzoate octaprenyltransferase; 4-hydroxybenzoate polyprenyltransferase complement(972733..973683) Methylobacterium extorquens PA1 5834177 YP_001638374.1 CDS Mext_0898 NC_010172.1 973719 974321 R KEGG: bra:BRADO6103 conserved hypothetical protein; putative signal peptide; putative signal peptide complement(973719..974321) Methylobacterium extorquens PA1 5834178 YP_001638375.1 CDS Mext_0899 NC_010172.1 974629 975381 D PFAM: protein of unknown function DUF558; KEGG: rpa:RPA1151 hypothetical protein; hypothetical protein 974629..975381 Methylobacterium extorquens PA1 5834648 YP_001638376.1 CDS Mext_0900 NC_010172.1 975411 976394 D PFAM: Asparaginase/glutaminase; KEGG: mms:mma_3667 L-asparaginase; asparaginase/glutaminase 975411..976394 Methylobacterium extorquens PA1 5834649 YP_001638377.1 CDS Mext_0901 NC_010172.1 976581 977951 D KEGG: xau:Xaut_4204 glutamate--cysteine ligase; TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GCS2; glutamate--cysteine ligase 976581..977951 Methylobacterium extorquens PA1 5834650 YP_001638378.1 CDS Mext_0902 NC_010172.1 978063 978473 D KEGG: bja:bll6457 hypothetical protein; hypothetical protein 978063..978473 Methylobacterium extorquens PA1 5834623 YP_001638379.1 CDS Mext_0903 NC_010172.1 978535 978819 D PFAM: SirA family protein; KEGG: mes:Meso_2429 SirA-like; SirA family protein 978535..978819 Methylobacterium extorquens PA1 5834624 YP_001638380.1 CDS Mext_0904 NC_010172.1 978859 979425 D PFAM: NUDIX hydrolase; KEGG: rle:RL1593 putative ADP-ribose pyrophosphatase; NUDIX hydrolase 978859..979425 Methylobacterium extorquens PA1 5834625 YP_001638381.1 CDS Mext_0905 NC_010172.1 979882 980280 D KEGG: bja:bll7889 hypothetical protein; hypothetical protein 979882..980280 Methylobacterium extorquens PA1 5834385 YP_001638382.1 CDS Mext_0906 NC_010172.1 980430 980870 R KEGG: sph:MGAS10270_Spy1299 hypothetical protein; hypothetical protein complement(980430..980870) Methylobacterium extorquens PA1 5834386 YP_001638383.1 CDS Mext_0907 NC_010172.1 981116 981808 R KEGG: xau:Xaut_4258 conserved hypothetical transmembrane signal peptide protein; putative transmembrane signal peptide protein complement(981116..981808) Methylobacterium extorquens PA1 5834387 YP_001638384.1 CDS Mext_0908 NC_010172.1 981805 982017 R PFAM: protein of unknown function DUF1289; KEGG: xau:Xaut_4259 protein of unknown function DUF1289; hypothetical protein complement(981805..982017) Methylobacterium extorquens PA1 5832883 YP_001638385.1 CDS Mext_0909 NC_010172.1 982072 982749 R KEGG: sma:SAV5996 hypothetical protein; hypothetical protein complement(982072..982749) Methylobacterium extorquens PA1 5832884 YP_001638386.1 CDS Mext_0910 NC_010172.1 982764 983591 R TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: xau:Xaut_4260 cobalamin 5'-phosphate synthase; cobalamin 5'-phosphate synthase complement(982764..983591) Methylobacterium extorquens PA1 5832885 YP_001638387.1 CDS Mext_0911 NC_010172.1 983759 984796 D KEGG: ret:RHE_CH02443 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase protein; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 983759..984796 Methylobacterium extorquens PA1 5835754 YP_001638388.1 CDS Mext_0912 NC_010172.1 984803 986344 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rpd:RPD_2046 ATP-binding region, ATPase-like; ATPase domain-containing protein complement(984803..986344) Methylobacterium extorquens PA1 5835755 YP_001638389.1 CDS Mext_0913 NC_010172.1 986687 987142 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: xau:Xaut_2917 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein 986687..987142 Methylobacterium extorquens PA1 5835756 YP_001638390.1 CDS Mext_0914 NC_010172.1 987178 989373 D PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: azo:azo0022 putative isoquinoline 1-oxidoreductase, beta subunit; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 987178..989373 Methylobacterium extorquens PA1 5835804 YP_001638391.1 CDS Mext_0915 NC_010172.1 989554 992952 D KEGG: xcb:XC_3757 methyltransferase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein 989554..992952 Methylobacterium extorquens PA1 5835805 YP_001638392.1 CDS Mext_0916 NC_010172.1 993040 994281 R PFAM: Amidase; KEGG: bja:bll5103 malonamidase E2; amidase complement(993040..994281) Methylobacterium extorquens PA1 5835806 YP_001638393.1 CDS Mext_0917 NC_010172.1 994389 995378 D PFAM: Extensin family protein; KEGG: xau:Xaut_1728 extensin family protein; extensin family protein 994389..995378 Methylobacterium extorquens PA1 5832781 YP_001638394.1 CDS Mext_0918 NC_010172.1 995559 996026 D KEGG: xau:Xaut_2732 putative exported protein of unknown function; hypothetical protein 995559..996026 Methylobacterium extorquens PA1 5832782 YP_001638395.1 CDS Mext_0919 NC_010172.1 996126 996800 D PFAM: ribonuclease T2; KEGG: xau:Xaut_2731 ribonuclease T2; ribonuclease T2 996126..996800 Methylobacterium extorquens PA1 5832783 YP_001638396.1 CDS Mext_0920 NC_010172.1 997278 998084 D PFAM: protein of unknown function DUF519; KEGG: mes:Meso_1970 protein of unknown function DUF519; hypothetical protein 997278..998084 Methylobacterium extorquens PA1 5831670 YP_001638397.1 CDS Mext_0921 NC_010172.1 998101 998370 R KEGG: nha:Nham_3268 hypothetical protein; hypothetical protein complement(998101..998370) Methylobacterium extorquens PA1 5831671 YP_001638398.1 CDS Mext_0922 NC_010172.1 998385 998615 R KEGG: nha:Nham_3760 hypothetical protein; hypothetical protein complement(998385..998615) Methylobacterium extorquens PA1 5831672 YP_001638399.1 CDS Mext_0923 NC_010172.1 998720 1000153 R PFAM: FAD linked oxidase domain protein; KEGG: ret:RHE_CH00808 glycolate oxidase subunit D protein; FAD linked oxidase domain-containing protein complement(998720..1000153) Methylobacterium extorquens PA1 5834023 YP_001638400.1 CDS Mext_0924 NC_010172.1 1000469 1000831 D PFAM: cytochrome c class I; KEGG: gbe:GbCGDNIH1_1910 cytochrome c; cytochrome c class I 1000469..1000831 Methylobacterium extorquens PA1 5834024 YP_001638401.1 CDS Mext_0925 NC_010172.1 1000928 1001515 R PFAM: regulatory protein MarR; KEGG: bja:blr0736 transcriptional regulatory protein; regulatory protein MarR complement(1000928..1001515) Methylobacterium extorquens PA1 5834025 YP_001638402.1 CDS Mext_0926 NC_010172.1 1001959 1002564 R KEGG: bbt:BBta_3054 hypothetical protein; hypothetical protein complement(1001959..1002564) Methylobacterium extorquens PA1 5834050 YP_001638403.1 CDS Mext_0927 NC_010172.1 1002561 1003292 R PFAM: protein of unknown function DUF1214; KEGG: xau:Xaut_1410 protein of unknown function DUF1214; hypothetical protein complement(1002561..1003292) Methylobacterium extorquens PA1 5834051 YP_001638404.1 CDS Mext_0928 NC_010172.1 1003303 1005657 R KEGG: rpe:RPE_1880 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; 1A family penicillin-binding protein complement(1003303..1005657) Methylobacterium extorquens PA1 5834052 YP_001638405.1 CDS Mext_0929 NC_010172.1 1005911 1006375 D PFAM: protein of unknown function UPF0153; KEGG: bja:blr3103 hypothetical protein; hypothetical protein 1005911..1006375 Methylobacterium extorquens PA1 5834053 YP_001638406.1 CDS Mext_0930 NC_010172.1 1006385 1007041 R PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_3103 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1006385..1007041) Methylobacterium extorquens PA1 5834054 YP_001638407.1 CDS Mext_0931 NC_010172.1 1007319 1007870 D PFAM: TadE family protein; KEGG: acr:Acry_2979 TadE family protein; TadE family protein 1007319..1007870 Methylobacterium extorquens PA1 5834055 YP_001638408.1 CDS Mext_0932 NC_010172.1 1007870 1008703 D KEGG: bra:BRADO3362 hypothetical protein; hypothetical protein 1007870..1008703 Methylobacterium extorquens PA1 5834060 YP_001638409.1 CDS Mext_0933 NC_010172.1 1008700 1010121 D KEGG: bbt:BBta_7530 hypothetical protein; hypothetical protein 1008700..1010121 Methylobacterium extorquens PA1 5834061 YP_001638410.1 CDS Mext_0934 NC_010172.1 1010378 1011592 D PFAM: AFG1-family ATPase; KEGG: bms:BR1929 hypothetical protein; AFG1 family ATPase 1010378..1011592 Methylobacterium extorquens PA1 5834062 YP_001638411.1 CDS Mext_0935 NC_010172.1 1011589 1012215 R TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: bbt:BBta_3948 putative 3-methyladenine DNA glycosylase; DNA-3-methyladenine glycosylase complement(1011589..1012215) Methylobacterium extorquens PA1 5834130 YP_001638412.1 CDS Mext_0936 NC_010172.1 1012288 1012974 R PFAM: ribonuclease H; KEGG: pna:Pnap_1680 ribonuclease H; ribonuclease H complement(1012288..1012974) Methylobacterium extorquens PA1 5834131 YP_001638413.1 CDS Mext_0937 NC_010172.1 1013027 1013812 R KEGG: nha:Nham_1400 hypothetical protein; hypothetical protein complement(1013027..1013812) Methylobacterium extorquens PA1 5834132 YP_001638414.1 CDS Mext_0938 NC_010172.1 1014525 1014833 D KEGG: bja:bsr4462 hypothetical protein; hypothetical protein 1014525..1014833 Methylobacterium extorquens PA1 5834138 YP_001638415.1 CDS Mext_0939 NC_010172.1 1015136 1016098 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 1015136..1016098 Methylobacterium extorquens PA1 5834139 YP_001638416.1 CDS Mext_0940 NC_010172.1 1016970 1018547 R PFAM: sodium/hydrogen exchanger; KEGG: bja:bll1306 Na+/H+ antiporter; sodium/hydrogen exchanger complement(1016970..1018547) Methylobacterium extorquens PA1 5834140 YP_001638417.1 CDS Mext_0941 NC_010172.1 1018645 1019397 R PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: atc:AGR_C_3833 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase complement(1018645..1019397) Methylobacterium extorquens PA1 5834141 YP_001638418.1 CDS Mext_0942 NC_010172.1 1019394 1020119 R PFAM: heat shock protein DnaJ domain protein; KEGG: pla:Plav_2408 heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein complement(1019394..1020119) Methylobacterium extorquens PA1 5834142 YP_001638419.1 CDS Mext_0943 NC_010172.1 1020322 1020591 R KEGG: xau:Xaut_1724 hypothetical protein; hypothetical protein complement(1020322..1020591) Methylobacterium extorquens PA1 5834143 YP_001638420.1 CDS Mext_0944 NC_010172.1 1020823 1021461 D PFAM: UreE urease accessory domain protein; KEGG: rpb:RPB_1867 UreE urease accessory-like; UreE urease accessory domain-containing protein 1020823..1021461 Methylobacterium extorquens PA1 5834148 YP_001638421.1 CDS Mext_0945 NC_010172.1 1021495 1021755 R hypothetical protein complement(1021495..1021755) Methylobacterium extorquens PA1 5834149 YP_001638422.1 CDS Mext_0946 NC_010172.1 1022583 1023647 D PFAM: dihydrouridine synthase DuS; KEGG: xau:Xaut_4250 TIM-barrel protein, YjbN family; tRNA-dihydrouridine synthase A 1022583..1023647 Methylobacterium extorquens PA1 5834150 YP_001638423.1 CDS Mext_0947 NC_010172.1 1023687 1025831 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bja:bll5864 hypothetical protein; diguanylate cyclase complement(1023687..1025831) Methylobacterium extorquens PA1 5834479 YP_001638424.1 CDS Mext_0948 NC_010172.1 1026146 1026598 R PFAM: response regulator receiver; KEGG: bra:BRADO6065 putative response regulator receiver (CheY-like protein); response regulator receiver complement(1026146..1026598) Methylobacterium extorquens PA1 5834480 YP_001638425.1 CDS Mext_0949 NC_010172.1 1026660 1027127 R PFAM: BLUF domain protein; KEGG: mmw:Mmwyl1_2753 BLUF domain protein; BLUF domain-containing protein complement(1026660..1027127) Methylobacterium extorquens PA1 5834481 YP_001638426.1 CDS Mext_0950 NC_010172.1 1027362 1028744 D PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: bbt:BBta_7242 putative flagellar hook protein FlgE; hypothetical protein 1027362..1028744 Methylobacterium extorquens PA1 5834599 YP_001638427.1 CDS Mext_0951 NC_010172.1 1028771 1030669 D TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: rpc:RPC_2014 flagellar hook-associated protein; flagellar hook-associated protein FlgK 1028771..1030669 Methylobacterium extorquens PA1 5834600 YP_001638428.1 CDS Mext_0952 NC_010172.1 1030684 1032477 D KEGG: rpc:RPC_2015 hypothetical protein; hypothetical protein 1030684..1032477 Methylobacterium extorquens PA1 5834601 YP_001638429.1 CDS Mext_0953 NC_010172.1 1032577 1033890 R KEGG: xau:Xaut_2621 hypothetical protein; hypothetical protein complement(1032577..1033890) Methylobacterium extorquens PA1 5834645 YP_001638430.1 CDS Mext_0954 NC_010172.1 1034415 1035305 R TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; KEGG: pla:Plav_1748 modification methylase, HemK family; protein-(glutamine-N5) methyltransferase complement(1034415..1035305) Methylobacterium extorquens PA1 5834646 YP_001638431.1 CDS prfA NC_010172.1 1035320 1036405 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(1035320..1036405) Methylobacterium extorquens PA1 5834647 YP_001638432.1 CDS Mext_0956 NC_010172.1 1036600 1037259 R KEGG: eca:ECA2975 hypothetical protein; hypothetical protein complement(1036600..1037259) Methylobacterium extorquens PA1 5834613 YP_001638433.1 CDS Mext_0957 NC_010172.1 1037305 1039566 R TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: xau:Xaut_2624 PTSINtr with GAF domain, PtsP; phosphoenolpyruvate-protein phosphotransferase complement(1037305..1039566) Methylobacterium extorquens PA1 5834614 YP_001638434.1 CDS Mext_0958 NC_010172.1 1039638 1040873 R KEGG: bra:BRADO0574 aspartokinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase complement(1039638..1040873) Methylobacterium extorquens PA1 5834615 YP_001638435.1 CDS Mext_0959 NC_010172.1 1041254 1041991 D KEGG: oan:Oant_1033 ubiquinone biosynthesis O-methyltransferase; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; ubiquinone biosynthesis O-methyltransferase 1041254..1041991 Methylobacterium extorquens PA1 5834476 YP_001638436.1 CDS Mext_0960 NC_010172.1 1042067 1042639 D PFAM: PEBP family protein; KEGG: swi:Swit_0873 PEBP family protein; PEBP family protein 1042067..1042639 Methylobacterium extorquens PA1 5834477 YP_001638437.1 CDS Mext_0961 NC_010172.1 1042776 1043756 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpa:RPA0400 possible alcohol dehydrogenase and quinone oxidoreductase; alcohol dehydrogenase 1042776..1043756 Methylobacterium extorquens PA1 5834478 YP_001638438.1 CDS ruvC NC_010172.1 1043998 1044567 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(1043998..1044567) Methylobacterium extorquens PA1 5834535 YP_001638439.1 CDS Mext_0963 NC_010172.1 1044657 1045298 R PFAM: YceI family protein; KEGG: gbe:GbCGDNIH1_1625 hypothetical protein; hypothetical protein complement(1044657..1045298) Methylobacterium extorquens PA1 5834536 YP_001638440.1 CDS ruvA NC_010172.1 1045385 1046011 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 1045385..1046011 Methylobacterium extorquens PA1 5834537 YP_001638441.1 CDS Mext_0965 NC_010172.1 1046028 1046324 R KEGG: atc:AGR_C_2384 hypothetical protein; hypothetical protein complement(1046028..1046324) Methylobacterium extorquens PA1 5834440 YP_001638442.1 CDS Mext_0966 NC_010172.1 1046402 1046782 D PFAM: response regulator receiver; KEGG: oan:Oant_3678 response regulator receiver protein; response regulator receiver 1046402..1046782 Methylobacterium extorquens PA1 5834441 YP_001638443.1 CDS Mext_0967 NC_010172.1 1046838 1048211 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: nha:Nham_2442 diguanylate cyclase (GGDEF domain); diguanylate cyclase 1046838..1048211 Methylobacterium extorquens PA1 5834442 YP_001638444.1 CDS Mext_0968 NC_010172.1 1048229 1048702 R TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: gka:GK1738 hypothetical protein; rrf2 family transcriptional regulator complement(1048229..1048702) Methylobacterium extorquens PA1 5835785 YP_001638445.1 CDS Mext_0969 NC_010172.1 1048770 1050041 D flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 1048770..1050041 Methylobacterium extorquens PA1 5835786 YP_001638446.1 CDS Mext_0970 NC_010172.1 1050069 1050233 R hypothetical protein complement(1050069..1050233) Methylobacterium extorquens PA1 5835787 YP_001638447.1 CDS Mext_0971 NC_010172.1 1050276 1050602 R hypothetical protein complement(1050276..1050602) Methylobacterium extorquens PA1 5835728 YP_001638448.1 CDS Mext_0972 NC_010172.1 1050592 1050996 R hypothetical protein complement(1050592..1050996) Methylobacterium extorquens PA1 5835729 YP_001638449.1 CDS Mext_0973 NC_010172.1 1051088 1052068 R TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: xau:Xaut_0075 cysteine synthase A; cysteine synthase A complement(1051088..1052068) Methylobacterium extorquens PA1 5835730 YP_001638450.1 CDS Mext_0974 NC_010172.1 1052424 1052600 R hypothetical protein complement(1052424..1052600) Methylobacterium extorquens PA1 5835774 YP_001638451.1 CDS Mext_0975 NC_010172.1 1052779 1053282 R PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: mlo:mlr7916 hypothetical protein; hypothetical protein complement(1052779..1053282) Methylobacterium extorquens PA1 5835775 YP_001638452.1 CDS Mext_0976 NC_010172.1 1053679 1054005 D KEGG: ret:RHE_CH00634 hypothetical protein; hypothetical protein 1053679..1054005 Methylobacterium extorquens PA1 5835776 YP_001638453.1 CDS Mext_0977 NC_010172.1 1054015 1055256 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: reu:Reut_A1474 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1054015..1055256) Methylobacterium extorquens PA1 5835807 YP_001638454.1 CDS Mext_0978 NC_010172.1 1055253 1056242 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20203 probable transcriptional regulator protein; LysR substrate-binding protein complement(1055253..1056242) Methylobacterium extorquens PA1 5835808 YP_001638455.1 CDS Mext_0979 NC_010172.1 1056451 1057497 D PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: rpc:RPC_2899 inositol phosphatase/fructose-1,6-bisphosphatase; inositol phosphatase/fructose-16-bisphosphatase 1056451..1057497 Methylobacterium extorquens PA1 5835809 YP_001638456.1 CDS Mext_0980 NC_010172.1 1057645 1058505 D PFAM: phosphoribulokinase/uridine kinase; KEGG: nwi:Nwi_2693 phosphoribulokinase/uridine kinase; phosphoribulokinase 1057645..1058505 Methylobacterium extorquens PA1 5834797 YP_001638457.1 CDS Mext_0981 NC_010172.1 1058577 1059536 R KEGG: ppr:PBPRA1384 hypothetical protein; hypothetical protein complement(1058577..1059536) Methylobacterium extorquens PA1 5834798 YP_001638458.1 CDS Mext_0982 NC_010172.1 1059652 1060446 R PFAM: protein of unknown function DUF28; KEGG: xau:Xaut_3062 protein of unknown function DUF28; hypothetical protein complement(1059652..1060446) Methylobacterium extorquens PA1 5834799 YP_001638459.1 CDS Mext_0983 NC_010172.1 1060672 1060938 D hypothetical protein 1060672..1060938 Methylobacterium extorquens PA1 5832039 YP_001638460.1 CDS Mext_0984 NC_010172.1 1060886 1061698 R KEGG: smd:Smed_5726 beta-lactamase-like protein; beta-lactamase-like protein complement(1060886..1061698) Methylobacterium extorquens PA1 5832040 YP_001638461.1 CDS Mext_0985 NC_010172.1 1062130 1062444 D KEGG: xau:Xaut_2465 hypothetical protein; hypothetical protein 1062130..1062444 Methylobacterium extorquens PA1 5832041 YP_001638462.1 CDS Mext_0986 NC_010172.1 1062466 1063608 R KEGG: mlo:mlr3471 hypothetical protein; hypothetical protein complement(1062466..1063608) Methylobacterium extorquens PA1 5831175 YP_001638463.1 CDS Mext_0987 NC_010172.1 1063608 1064984 R PFAM: polysaccharide biosynthesis protein; KEGG: rle:RL4299 putative polysaccharide export related protein; polysaccharide biosynthesis protein complement(1063608..1064984) Methylobacterium extorquens PA1 5831176 YP_001638464.1 CDS Mext_0988 NC_010172.1 1065104 1066090 R KEGG: rpd:RPD_0900 hypothetical protein; hypothetical protein complement(1065104..1066090) Methylobacterium extorquens PA1 5831177 YP_001638465.1 CDS Mext_0989 NC_010172.1 1066009 1067148 R KEGG: mes:Meso_3041 OpgC protein; OpgC protein complement(1066009..1067148) Methylobacterium extorquens PA1 5833062 YP_001638466.1 CDS Mext_0990 NC_010172.1 1067337 1068098 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpa:RPA4522 haloacid dehalogenase-like hydrolase; HAD family hydrolase complement(1067337..1068098) Methylobacterium extorquens PA1 5833063 YP_001638467.1 CDS Mext_0991 NC_010172.1 1068092 1068796 R PFAM: ribulose-phosphate 3-epimerase; KEGG: rpb:RPB_3689 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(1068092..1068796) Methylobacterium extorquens PA1 5833064 YP_001638468.1 CDS Mext_0992 NC_010172.1 1068965 1069540 R PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_0639 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1068965..1069540) Methylobacterium extorquens PA1 5831907 YP_001638469.1 CDS Mext_0993 NC_010172.1 1069579 1071924 R PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: mag:amb1108 arginine/lysine/ornithine decarboxylase; ornithine decarboxylase complement(1069579..1071924) Methylobacterium extorquens PA1 5831908 YP_001638470.1 CDS Mext_0994 NC_010172.1 1072009 1072371 R TIGRFAM: TonB family protein; KEGG: rsh:Rsph17029_2581 TonB family protein; TonB family protein complement(1072009..1072371) Methylobacterium extorquens PA1 5831909 YP_001638471.1 CDS Mext_0995 NC_010172.1 1072639 1073259 R TIGRFAM: molybdenum cofactor synthesis domain protein; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: rpd:RPD_1202 molybdenum cofactor biosynthesis protein; molybdenum cofactor biosynthesis protein B complement(1072639..1073259) Methylobacterium extorquens PA1 5833338 YP_001638472.1 CDS Mext_0996 NC_010172.1 1073359 1074666 D TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: bra:BRADO2830 adenylosuccinate lyase (adenylosuccinase) (ASL); adenylosuccinate lyase 1073359..1074666 Methylobacterium extorquens PA1 5833339 YP_001638473.1 CDS Mext_0997 NC_010172.1 1074724 1075581 D PFAM: aminotransferase class IV; KEGG: rso:RS01735 putative D-alanine aminotransferase (D-aspartate aminotransferase) protein; class IV aminotransferase 1074724..1075581 Methylobacterium extorquens PA1 5833340 YP_001638474.1 CDS Mext_0998 NC_010172.1 1075654 1075971 D KEGG: rpc:RPC_0989 hypothetical protein; hypothetical protein 1075654..1075971 Methylobacterium extorquens PA1 5835757 YP_001638475.1 CDS Mext_0999 NC_010172.1 1076105 1077451 D PFAM: adenylosuccinate synthetase; KEGG: ret:RHE_CH03344 adenylosuccinate synthetase protein; adenylosuccinate synthase 1076105..1077451 Methylobacterium extorquens PA1 5835758 YP_001638476.1 CDS Mext_1000 NC_010172.1 1077493 1078971 D KEGG: bja:bll7051 hypothetical protein; hypothetical protein 1077493..1078971 Methylobacterium extorquens PA1 5835759 YP_001638477.1 CDS Mext_1001 NC_010172.1 1079127 1080020 R binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 complement(1079127..1080020) Methylobacterium extorquens PA1 5832730 YP_001638478.1 CDS Mext_1002 NC_010172.1 1080285 1082378 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mes:Meso_3605 diguanylate cyclase/phosphodiesterase; diguanylate cyclase complement(1080285..1082378) Methylobacterium extorquens PA1 5832731 YP_001638479.1 CDS Mext_1003 NC_010172.1 1082732 1082992 D hypothetical protein 1082732..1082992 Methylobacterium extorquens PA1 5832732 YP_001638480.1 CDS Mext_1004 NC_010172.1 1083028 1083483 R PFAM: GCN5-related N-acetyltransferase; KEGG: aha:AHA_2068 protein PhnO; N-acetyltransferase GCN5 complement(1083028..1083483) Methylobacterium extorquens PA1 5833660 YP_001638481.1 CDS Mext_1005 NC_010172.1 1083687 1084718 R KEGG: bbt:BBta_6759 pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA); TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase complement(1083687..1084718) Methylobacterium extorquens PA1 5833661 YP_001638482.1 CDS Mext_1006 NC_010172.1 1085219 1086253 D PFAM: GTPase EngC; KEGG: mlo:mlr1879 putative GTPase; GTPase EngC 1085219..1086253 Methylobacterium extorquens PA1 5833782 YP_001638483.1 CDS Mext_1007 NC_010172.1 1092733 1093902 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: rpc:RPC_0437 NAD-dependent epimerase/dehydratase; NADH dehydrogenase complement(1092733..1093902) Methylobacterium extorquens PA1 5831431 YP_001638484.1 CDS Mext_1008 NC_010172.1 1094154 1094819 R KEGG: bja:bll2323 hypothetical protein; hypothetical protein complement(1094154..1094819) Methylobacterium extorquens PA1 5831432 YP_001638485.1 CDS Mext_1009 NC_010172.1 1095062 1096231 D PFAM: proton/sugar symporter LacY; major facilitator superfamily MFS_1; KEGG: rru:Rru_A1657 major facilitator superfamily MFS_1; major facilitator transporter 1095062..1096231 Methylobacterium extorquens PA1 5831433 YP_001638486.1 CDS Mext_1010 NC_010172.1 1096315 1098492 D binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 1096315..1098492 Methylobacterium extorquens PA1 5831529 YP_001638487.1 CDS Mext_1011 NC_010172.1 1098577 1098939 D KEGG: bba:Bd0310 hypothetical protein; hypothetical protein 1098577..1098939 Methylobacterium extorquens PA1 5831530 YP_001638488.1 CDS Mext_1012 NC_010172.1 1099030 1099410 R KEGG: bbt:BBta_0217 putative exported protein of unknown function; hypothetical protein complement(1099030..1099410) Methylobacterium extorquens PA1 5831531 YP_001638489.1 CDS Mext_1013 NC_010172.1 1099831 1100082 R hypothetical protein complement(1099831..1100082) Methylobacterium extorquens PA1 5832267 YP_001638490.1 CDS Mext_1014 NC_010172.1 1100200 1101210 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nmu:Nmul_A1489 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1100200..1101210) Methylobacterium extorquens PA1 5832268 YP_001638491.1 CDS Mext_1015 NC_010172.1 1101357 1101968 R PFAM: isochorismatase hydrolase; KEGG: bja:blr8041 hypothetical protein; isochorismatase hydrolase complement(1101357..1101968) Methylobacterium extorquens PA1 5832269 YP_001638492.1 CDS Mext_1016 NC_010172.1 1102001 1103173 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eba:ebA1699 putative glutathione-dependent formaldehyde dehydrogenase; alcohol dehydrogenase complement(1102001..1103173) Methylobacterium extorquens PA1 5833246 YP_001638493.1 CDS Mext_1017 NC_010172.1 1103303 1103956 R KEGG: bpm:BURPS1710b_1365 hypothetical protein; hypothetical protein complement(1103303..1103956) Methylobacterium extorquens PA1 5833247 YP_001638494.1 CDS Mext_1018 NC_010172.1 1104132 1104989 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rsq:Rsph17025_2997 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1104132..1104989 Methylobacterium extorquens PA1 5833248 YP_001638495.1 CDS Mext_1019 NC_010172.1 1105057 1106049 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbt:BBta_3170 putative short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 1105057..1106049 Methylobacterium extorquens PA1 5830990 YP_001638496.1 CDS Mext_1020 NC_010172.1 1106133 1106312 D hypothetical protein 1106133..1106312 Methylobacterium extorquens PA1 5830991 YP_001638497.1 CDS Mext_1021 NC_010172.1 1106450 1108120 R PFAM: ABC-1 domain protein; KEGG: spe:Spro_2799 ABC-1 domain protein; hypothetical protein complement(1106450..1108120) Methylobacterium extorquens PA1 5830992 YP_001638498.1 CDS Mext_1022 NC_010172.1 1108242 1108772 R hypothetical protein complement(1108242..1108772) Methylobacterium extorquens PA1 5833233 YP_001638499.1 CDS Mext_1023 NC_010172.1 1115219 1117312 D PFAM: peptidase M23B; KEGG: nha:Nham_0660 peptidase M23B; peptidase M23B 1115219..1117312 Methylobacterium extorquens PA1 5831516 YP_001638500.1 CDS Mext_1024 NC_010172.1 1117335 1117829 R PFAM: protein of unknown function DUF1311; KEGG: pde:Pden_3634 protein of unknown function DUF1311; hypothetical protein complement(1117335..1117829) Methylobacterium extorquens PA1 5831836 YP_001638501.1 CDS Mext_1025 NC_010172.1 1117914 1118807 R PFAM: glutamyl-tRNA synthetase class Ic; KEGG: xau:Xaut_3840 glutamyl-tRNA synthetase class Ic; glutamyl-tRNA synthetase complement(1117914..1118807) Methylobacterium extorquens PA1 5831837 YP_001638502.1 CDS Mext_1026 NC_010172.1 1118838 1119137 R hypothetical protein complement(1118838..1119137) Methylobacterium extorquens PA1 5831838 YP_001638503.1 CDS Mext_1027 NC_010172.1 1119361 1119579 D hypothetical protein 1119361..1119579 Methylobacterium extorquens PA1 5831716 YP_001638504.1 CDS Mext_1028 NC_010172.1 1119602 1121482 R molecular chaperone; heat shock protein 90 complement(1119602..1121482) Methylobacterium extorquens PA1 5831717 YP_001638505.1 CDS Mext_1029 NC_010172.1 1121637 1121951 R hypothetical protein complement(1121637..1121951) Methylobacterium extorquens PA1 5831718 YP_001638506.1 CDS Mext_1030 NC_010172.1 1121986 1123863 D PFAM: gamma-glutamyltranspeptidase; KEGG: xau:Xaut_0189 gamma-glutamyltransferase; gamma-glutamyltransferase 1121986..1123863 Methylobacterium extorquens PA1 5832370 YP_001638507.1 CDS Mext_1031 NC_010172.1 1123966 1125603 D PFAM: Dak kinase; Dak phosphatase; KEGG: net:Neut_1377 glycerone kinase; Glycerone kinase 1123966..1125603 Methylobacterium extorquens PA1 5832371 YP_001638508.1 CDS Mext_1032 NC_010172.1 1125612 1126460 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pla:Plav_2215 methyltransferase type 11; type 11 methyltransferase 1125612..1126460 Methylobacterium extorquens PA1 5832372 YP_001638509.1 CDS Mext_1033 NC_010172.1 1126516 1127808 D PFAM: major facilitator superfamily MFS_1; KEGG: har:HEAR2461 putative oxalate/formate antiporter; major facilitator transporter 1126516..1127808 Methylobacterium extorquens PA1 5832763 YP_001638510.1 CDS Mext_1034 NC_010172.1 1127927 1129162 D KEGG: xau:Xaut_3280 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6Y C5,15-methyltransferase subunit CbiE 1127927..1129162 Methylobacterium extorquens PA1 5832764 YP_001638511.1 CDS Mext_1035 NC_010172.1 1129159 1129566 D KEGG: bbt:BBta_3151 putative CobE protein; putative CobE protein 1129159..1129566 Methylobacterium extorquens PA1 5832765 YP_001638512.1 CDS Mext_1036 NC_010172.1 1129654 1130745 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bbt:BBta_4589 putative diguanylate cyclase (GGDEF); diguanylate cyclase 1129654..1130745 Methylobacterium extorquens PA1 5831655 YP_001638513.1 CDS Mext_1037 NC_010172.1 1130820 1131728 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pde:Pden_0302 transcriptional regulator, LysR family; LysR substrate-binding protein complement(1130820..1131728) Methylobacterium extorquens PA1 5831656 YP_001638514.1 CDS Mext_1038 NC_010172.1 1131838 1132281 D PFAM: transmembrane pair domain protein; KEGG: atc:AGR_C_3030 hypothetical protein; transmembrane pair domain-containing protein 1131838..1132281 Methylobacterium extorquens PA1 5831657 YP_001638515.1 CDS Mext_1039 NC_010172.1 1132362 1133162 D TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bbt:BBta_3152 precorrin-4 C(11)-methyltransferase; precorrin-4 C(11)-methyltransferase 1132362..1133162 Methylobacterium extorquens PA1 5833391 YP_001638516.1 CDS Mext_1040 NC_010172.1 1133159 1134484 D responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 1133159..1134484 Methylobacterium extorquens PA1 5833392 YP_001638517.1 CDS Mext_1041 NC_010172.1 1134751 1135179 R PFAM: helix-turn-helix domain protein; KEGG: oan:Oant_0753 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein complement(1134751..1135179) Methylobacterium extorquens PA1 5833393 YP_001638518.1 CDS Mext_1042 NC_010172.1 1135630 1135965 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bja:bll7423 hypothetical protein; antibiotic biosynthesis monooxygenase 1135630..1135965 Methylobacterium extorquens PA1 5833663 YP_001638519.1 CDS Mext_1043 NC_010172.1 1136119 1137366 R PFAM: major facilitator superfamily MFS_1; KEGG: gbe:GbCGDNIH1_1206 antimicrobial peptide efflux protein RosA; major facilitator transporter complement(1136119..1137366) Methylobacterium extorquens PA1 5833664 YP_001638520.1 CDS Mext_1044 NC_010172.1 1137797 1139302 D TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bja:bll6310 putative exopolysaccharide production protein; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 1137797..1139302 Methylobacterium extorquens PA1 5833665 YP_001638521.1 CDS Mext_1045 NC_010172.1 1139306 1139899 R KEGG: nha:Nham_0618 putative ferric uptake regulator, FUR family; Fe2+/Zn2+ uptake regulation protein-like protein complement(1139306..1139899) Methylobacterium extorquens PA1 5831512 YP_001638522.1 CDS Mext_1046 NC_010172.1 1140235 1141146 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll7771 ABC transporter ATP-binding protein; ABC transporter-like protein 1140235..1141146 Methylobacterium extorquens PA1 5831513 YP_001638523.1 CDS Mext_1047 NC_010172.1 1141143 1142030 D PFAM: ABC-3 protein; KEGG: rru:Rru_A3703 ABC-3 transporter component; ABC-3 protein 1141143..1142030 Methylobacterium extorquens PA1 5831514 YP_001638524.1 CDS Mext_1048 NC_010172.1 1142585 1146106 D KEGG: bra:BRADO4145 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 1142585..1146106 Methylobacterium extorquens PA1 5831150 YP_001638525.1 CDS Mext_1049 NC_010172.1 1146416 1147213 D KEGG: bja:blr3859 hypothetical protein; hypothetical protein 1146416..1147213 Methylobacterium extorquens PA1 5831151 YP_001638526.1 CDS Mext_1050 NC_010172.1 1147331 1148026 R PFAM: ChaC family protein; AIG2 family protein; KEGG: oan:Oant_4148 ChaC family protein; ChaC family protein complement(1147331..1148026) Methylobacterium extorquens PA1 5831152 YP_001638527.1 CDS Mext_1051 NC_010172.1 1148804 1149544 D TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: mes:Meso_0952 DNA repair protein RecO; DNA repair protein RecO 1148804..1149544 Methylobacterium extorquens PA1 5832069 YP_001638528.1 CDS Mext_1052 NC_010172.1 1149666 1151912 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1149666..1151912 Methylobacterium extorquens PA1 5832070 YP_001638529.1 CDS infA NC_010172.1 1151989 1152264 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(1151989..1152264) Methylobacterium extorquens PA1 5832071 YP_001638530.1 CDS Mext_1054 NC_010172.1 1152582 1153694 R PFAM: Extracellular ligand-binding receptor; KEGG: xau:Xaut_3905 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(1152582..1153694) Methylobacterium extorquens PA1 5831193 YP_001638531.1 CDS Mext_1055 NC_010172.1 1153864 1154187 D PFAM: protein of unknown function DUF182; KEGG: xau:Xaut_3909 protein of unknown function DUF182; hypothetical protein 1153864..1154187 Methylobacterium extorquens PA1 5831194 YP_001638532.1 CDS Mext_1056 NC_010172.1 1154254 1154982 D KEGG: rpe:RPE_1660 xanthine dehydrogenase accessory factor; xanthine dehydrogenase accessory factor 1154254..1154982 Methylobacterium extorquens PA1 5831195 YP_001638533.1 CDS Mext_1057 NC_010172.1 1154987 1155997 D PFAM: molybdopterin binding domain; KEGG: rpa:RPA3797 hypothetical protein; molybdopterin binding domain-containing protein 1154987..1155997 Methylobacterium extorquens PA1 5833505 YP_001638534.1 CDS Mext_1058 NC_010172.1 1155984 1156577 D KEGG: mes:Meso_1294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1155984..1156577 Methylobacterium extorquens PA1 5833506 YP_001638535.1 CDS Mext_1059 NC_010172.1 1156585 1156746 R KEGG: bbt:BBta_7189 hypothetical protein; hypothetical protein complement(1156585..1156746) Methylobacterium extorquens PA1 5833507 YP_001638536.1 CDS Mext_1060 NC_010172.1 1156751 1157617 R PFAM: formyl transferase domain protein; KEGG: bam:Bamb_5891 formyl transferase domain protein; formyl transferase domain-containing protein complement(1156751..1157617) Methylobacterium extorquens PA1 5833037 YP_001638537.1 CDS Mext_1061 NC_010172.1 1157782 1158516 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pub:SAR11_0304 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 1157782..1158516 Methylobacterium extorquens PA1 5833038 YP_001638538.1 CDS Mext_1062 NC_010172.1 1158569 1159330 R KEGG: rpc:RPC_1642 hypothetical protein; hypothetical protein complement(1158569..1159330) Methylobacterium extorquens PA1 5833039 YP_001638539.1 CDS Mext_1063 NC_010172.1 1159618 1160214 D PFAM: Exopolysaccharide synthesis ExoD; KEGG: xau:Xaut_4269 exopolysaccharide synthesis ExoD; exopolysaccharide synthesis ExoD 1159618..1160214 Methylobacterium extorquens PA1 5832481 YP_001638540.1 CDS Mext_1064 NC_010172.1 1160419 1161129 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_4461 ABC transporter related; ABC transporter-like protein complement(1160419..1161129) Methylobacterium extorquens PA1 5832482 YP_001638541.1 CDS Mext_1065 NC_010172.1 1161145 1162464 R TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: xau:Xaut_4462 lipoprotein releasing system, transmembrane protein, LolC/E family; LolC/E family lipoprotein releasing system, transmembrane protein complement(1161145..1162464) Methylobacterium extorquens PA1 5832483 YP_001638542.1 CDS Mext_1066 NC_010172.1 1162477 1163802 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(1162477..1163802) Methylobacterium extorquens PA1 5833642 YP_001638543.1 CDS Mext_1068 NC_010172.1 1164278 1164619 R PFAM: protein of unknown function DUF1467; KEGG: xau:Xaut_4616 protein of unknown function DUF1467; hypothetical protein complement(1164278..1164619) Methylobacterium extorquens PA1 5833644 YP_001638544.1 CDS Mext_1069 NC_010172.1 1164685 1165089 R KEGG: jan:Jann_3164 glyoxalase/bleomycin resistance protein/dioxygenase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; methylmalonyl-CoA epimerase complement(1164685..1165089) Methylobacterium extorquens PA1 5831873 YP_001638545.1 CDS Mext_1070 NC_010172.1 1165240 1166913 R PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: xau:Xaut_4618 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(1165240..1166913) Methylobacterium extorquens PA1 5831874 YP_001638546.1 CDS Mext_1071 NC_010172.1 1166933 1167772 R TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: mlo:mll1351 biotin-protein ligase birA; biotin--acetyl-CoA-carboxylase ligase complement(1166933..1167772) Methylobacterium extorquens PA1 5831875 YP_001638547.1 CDS Mext_1072 NC_010172.1 1167792 1169231 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: pla:Plav_3213 proton-translocating NADH-quinone oxidoreductase, chain N; proton-translocating NADH-quinone oxidoreductase subunit N complement(1167792..1169231) Methylobacterium extorquens PA1 5832478 YP_001638548.1 CDS Mext_1073 NC_010172.1 1169228 1170811 R KEGG: mes:Meso_1034 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M complement(1169228..1170811) Methylobacterium extorquens PA1 5832479 YP_001638549.1 CDS Mext_1074 NC_010172.1 1170811 1172922 R KEGG: pla:Plav_3215 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L complement(1170811..1172922) Methylobacterium extorquens PA1 5832480 YP_001638550.1 CDS Mext_1075 NC_010172.1 1172981 1173286 R PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: pla:Plav_3216 NADH-ubiquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase chain 4L complement(1172981..1173286) Methylobacterium extorquens PA1 5831076 YP_001638551.1 CDS Mext_1076 NC_010172.1 1173292 1173912 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: nwi:Nwi_1878 NADH dehydrogenase subunit J; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 complement(1173292..1173912) Methylobacterium extorquens PA1 5831077 YP_001638552.1 CDS Mext_1077 NC_010172.1 1174122 1174610 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I complement(1174122..1174610) Methylobacterium extorquens PA1 5831078 YP_001638553.1 CDS Mext_1078 NC_010172.1 1174695 1175717 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H complement(1174695..1175717) Methylobacterium extorquens PA1 5832766 YP_001638554.1 CDS Mext_1079 NC_010172.1 1175730 1177856 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G complement(1175730..1177856) Methylobacterium extorquens PA1 5832767 YP_001638555.1 CDS Mext_1080 NC_010172.1 1177831 1179132 R part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F complement(1177831..1179132) Methylobacterium extorquens PA1 5832768 YP_001638556.1 CDS Mext_1081 NC_010172.1 1179143 1180381 R KEGG: jan:Jann_1176 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH-quinone oxidoreductase subunit E complement(1179143..1180381) Methylobacterium extorquens PA1 5832278 YP_001638557.1 CDS Mext_1082 NC_010172.1 1180400 1181590 R KEGG: bra:BRADO4183 NADH-quinone oxidoreductase chain D (NADH dehydrogenase I, chain D) (NDH-1, chain D); TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase I subunit D complement(1180400..1181590) Methylobacterium extorquens PA1 5832279 YP_001638558.1 CDS Mext_1083 NC_010172.1 1181602 1182261 R KEGG: xau:Xaut_4631 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH (or F420H2) dehydrogenase subunit C complement(1181602..1182261) Methylobacterium extorquens PA1 5832280 YP_001638559.1 CDS Mext_1084 NC_010172.1 1182273 1182860 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(1182273..1182860) Methylobacterium extorquens PA1 5832400 YP_001638560.1 CDS Mext_1085 NC_010172.1 1182913 1183278 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: mes:Meso_1022 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 complement(1182913..1183278) Methylobacterium extorquens PA1 5832401 YP_001638561.1 CDS Mext_1086 NC_010172.1 1184016 1184597 D PFAM: SCP-like extracellular; KEGG: bja:blr1486 hypothetical protein; hypothetical protein 1184016..1184597 Methylobacterium extorquens PA1 5835777 YP_001638562.1 CDS Mext_1087 NC_010172.1 1184643 1185089 R TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain protein; KEGG: sme:SMa1243 Azu1 pseudoazurin (blue copper protein); pseudoazurin complement(1184643..1185089) Methylobacterium extorquens PA1 5835778 YP_001638563.1 CDS Mext_1088 NC_010172.1 1185385 1188858 D TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: bja:blr7377 carbamoylphosphate synthase large subunit; carbamoyl-phosphate synthase large subunit 1185385..1188858 Methylobacterium extorquens PA1 5835011 YP_001638564.1 CDS greA NC_010172.1 1188989 1189471 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1188989..1189471 Methylobacterium extorquens PA1 5835012 YP_001638565.1 CDS Mext_1090 NC_010172.1 1189477 1189977 D hypothetical protein 1189477..1189977 Methylobacterium extorquens PA1 5835013 YP_001638566.1 CDS Mext_1091 NC_010172.1 1190003 1191112 D PFAM: protein of unknown function DUF1022; KEGG: pla:Plav_2310 protein of unknown function DUF1022; hypothetical protein 1190003..1191112 Methylobacterium extorquens PA1 5834301 YP_001638567.1 CDS Mext_1092 NC_010172.1 1191263 1192237 D KEGG: bbt:BBta_6803 thioredoxin reductase, FAD/NAD(P)-binding; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 1191263..1192237 Methylobacterium extorquens PA1 5834302 YP_001638568.1 CDS Mext_1093 NC_010172.1 1192578 1193468 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_2754 transcriptional regulator, LysR family; LysR substrate-binding protein 1192578..1193468 Methylobacterium extorquens PA1 5834303 YP_001638569.1 CDS Mext_1094 NC_010172.1 1193465 1194040 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 1193465..1194040 Methylobacterium extorquens PA1 5835779 YP_001638570.1 CDS Mext_1095 NC_010172.1 1194059 1194529 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: oan:Oant_2273 acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1194059..1194529 Methylobacterium extorquens PA1 5835780 YP_001638571.1 CDS Mext_1096 NC_010172.1 1194540 1195907 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: xau:Xaut_3502 acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase 1194540..1195907 Methylobacterium extorquens PA1 5835781 YP_001638572.1 CDS Mext_1097 NC_010172.1 1195992 1196666 D PFAM: leucyl/phenylalanyl-tRNA--protein transferase; KEGG: nwi:Nwi_1757 leucyl/phenylalanyl-tRNA--protein transferase; leucyltransferase 1195992..1196666 Methylobacterium extorquens PA1 5835832 YP_001638573.1 CDS Mext_1098 NC_010172.1 1196733 1197353 R PFAM: regulatory protein TetR; KEGG: acr:Acry_3038 transcriptional regulator, TetR family; regulatory protein TetR complement(1196733..1197353) Methylobacterium extorquens PA1 5835833 YP_001638574.1 CDS Mext_1099 NC_010172.1 1197401 1197880 D KEGG: sus:Acid_5124 hypothetical protein; hypothetical protein 1197401..1197880 Methylobacterium extorquens PA1 5835834 YP_001638575.1 CDS Mext_1100 NC_010172.1 1197950 1198609 R KEGG: mlo:mlr0199 cellulase-like protein; hypothetical protein complement(1197950..1198609) Methylobacterium extorquens PA1 5831420 YP_001638576.1 CDS Mext_1101 NC_010172.1 1198789 1199301 R PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: nwi:Nwi_1760 NADH-ubiquinone oxidoreductase; NADH:ubiquinone oxidoreductase 17.2 kD subunit complement(1198789..1199301) Methylobacterium extorquens PA1 5831421 YP_001638577.1 CDS Mext_1102 NC_010172.1 1199725 1203456 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1199725..1203456 Methylobacterium extorquens PA1 5831422 YP_001638578.1 CDS Mext_1103 NC_010172.1 1203662 1203874 R KEGG: acr:Acry_2813 arsenical pump membrane protein; Na+/H+ antiporter NhaD permease-like protein complement(1203662..1203874) Methylobacterium extorquens PA1 5835710 YP_001638579.1 CDS Mext_1104 NC_010172.1 1203973 1204221 D KEGG: hne:HNE_0990 arsenical resistance protein ArsH; arsenical resistance protein ArsH 1203973..1204221 Methylobacterium extorquens PA1 5835711 YP_001638580.1 CDS Mext_1105 NC_010172.1 1205224 1205589 R PFAM: PRC-barrel domain protein; KEGG: atc:AGR_C_723 hypothetical protein; PRC-barrel domain-containing protein complement(1205224..1205589) Methylobacterium extorquens PA1 5835712 YP_001638581.1 CDS Mext_1106 NC_010172.1 1206737 1207507 D PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: rpc:RPC_2765 ion transport 2; Ion transport 2 domain-containing protein 1206737..1207507 Methylobacterium extorquens PA1 5831888 YP_001638582.1 CDS Mext_1107 NC_010172.1 1207590 1208447 R hypothetical protein complement(1207590..1208447) Methylobacterium extorquens PA1 5831889 YP_001638583.1 CDS Mext_1108 NC_010172.1 1208559 1209086 D KEGG: eba:ebA6904 hypothetical protein; hypothetical protein 1208559..1209086 Methylobacterium extorquens PA1 5831890 YP_001638584.1 CDS Mext_1109 NC_010172.1 1209443 1209829 R PFAM: Endoribonuclease L-PSP; KEGG: reh:H16_B2517 putative regulator of purine biosynthesis; endoribonuclease L-PSP complement(1209443..1209829) Methylobacterium extorquens PA1 5831178 YP_001638585.1 CDS Mext_1110 NC_010172.1 1209928 1211028 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: psb:Psyr_2937 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase complement(1209928..1211028) Methylobacterium extorquens PA1 5831179 YP_001638586.1 CDS Mext_1111 NC_010172.1 1211140 1212057 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psp:PSPPH_2295 transcriptional regulator, LysR family; carbonate dehydratase 1211140..1212057 Methylobacterium extorquens PA1 5831180 YP_001638587.1 CDS Mext_1112 NC_010172.1 1212335 1212919 D KEGG: mlo:mlr3990 weak similarity to phospholipase; hypothetical protein 1212335..1212919 Methylobacterium extorquens PA1 5833055 YP_001638588.1 CDS Mext_1113 NC_010172.1 1213782 1214264 D KEGG: zmo:ZMO0488 probable GTP binding protein; hypothetical protein 1213782..1214264 Methylobacterium extorquens PA1 5833056 YP_001638589.1 CDS Mext_1114 NC_010172.1 1215225 1215971 D KEGG: rpa:RPA1404 glutamyl-tRNA(Gln) amidotransferase subunit A; Urea carboxylase 1215225..1215971 Methylobacterium extorquens PA1 5833057 YP_001638590.1 CDS Mext_1115 NC_010172.1 1216229 1217272 R PFAM: ribonuclease BN; KEGG: bra:BRADO2085 conserved hypothetical protein; putative membrane protein; putative ribonuclease; ribonuclease BN complement(1216229..1217272) Methylobacterium extorquens PA1 5833349 YP_001638591.1 CDS Mext_1116 NC_010172.1 1217408 1218535 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: rha:RHA1_ro02434 hypothetical protein; NAD-dependent epimerase/dehydratase 1217408..1218535 Methylobacterium extorquens PA1 5833350 YP_001638592.1 CDS Mext_1117 NC_010172.1 1218711 1220213 R KEGG: rpa:RPA2075 putative signal transduction histidine kinase with GAF and PAS/PAC domains; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein complement(1218711..1220213) Methylobacterium extorquens PA1 5833351 YP_001638593.1 CDS Mext_1118 NC_010172.1 1220517 1221245 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sal:Sala_1165 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1220517..1221245) Methylobacterium extorquens PA1 5833653 YP_001638594.1 CDS Mext_1119 NC_010172.1 1221242 1221877 R PFAM: protein of unknown function DUF938; KEGG: reh:H16_B2396 hypothetical protein; hypothetical protein complement(1221242..1221877) Methylobacterium extorquens PA1 5833654 YP_001638595.1 CDS Mext_1120 NC_010172.1 1222150 1222803 R KEGG: syf:Synpcc7942_1330 hypothetical protein; hypothetical protein complement(1222150..1222803) Methylobacterium extorquens PA1 5833655 YP_001638596.1 CDS Mext_1121 NC_010172.1 1222999 1223469 D KEGG: rpd:RPD_2389 ABC transporter related; hypothetical protein 1222999..1223469 Methylobacterium extorquens PA1 5833997 YP_001638597.1 CDS Mext_1122 NC_010172.1 1223772 1225481 D PFAM: K potassium transporter; KEGG: rpd:RPD_2692 K+ potassium transporter; K potassium transporter 1223772..1225481 Methylobacterium extorquens PA1 5833998 YP_001638598.1 CDS Mext_1123 NC_010172.1 1225540 1226076 R KEGG: bxe:Bxe_B1808 hypothetical protein; hypothetical protein complement(1225540..1226076) Methylobacterium extorquens PA1 5833999 YP_001638599.1 CDS Mext_1124 NC_010172.1 1226097 1226306 R KEGG: rme:Rmet_2604 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1226097..1226306) Methylobacterium extorquens PA1 5834634 YP_001638600.1 CDS Mext_1125 NC_010172.1 1226367 1227359 R KEGG: nha:Nham_0970 hypothetical protein; hypothetical protein complement(1226367..1227359) Methylobacterium extorquens PA1 5834635 YP_001638601.1 CDS Mext_1126 NC_010172.1 1228178 1229230 D PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: gvi:glr1689 hypothetical protein; platelet-activating factor acetylhydrolase plasma/intracellular isoform II 1228178..1229230 Methylobacterium extorquens PA1 5834636 YP_001638602.1 CDS Mext_1127 NC_010172.1 1229266 1230399 D PFAM: metallophosphoesterase; KEGG: psb:Psyr_2599 metallophosphoesterase; metallophosphoesterase 1229266..1230399 Methylobacterium extorquens PA1 5834670 YP_001638603.1 CDS Mext_1128 NC_010172.1 1230817 1231128 R hypothetical protein complement(1230817..1231128) Methylobacterium extorquens PA1 5834671 YP_001638604.1 CDS Mext_1129 NC_010172.1 1232012 1232509 R PFAM: protein of unknown function DUF892; KEGG: jan:Jann_2208 protein of unknown function DUF892; hypothetical protein complement(1232012..1232509) Methylobacterium extorquens PA1 5834672 YP_001638605.1 CDS Mext_1130 NC_010172.1 1232878 1234362 R KEGG: sco:SCO3841 hypothetical protein; hypothetical protein complement(1232878..1234362) Methylobacterium extorquens PA1 5834506 YP_001638606.1 CDS Mext_1131 NC_010172.1 1234829 1235668 D PFAM: formate/nitrite transporter; KEGG: sde:Sde_2826 formate/nitrate transporter; formate/nitrite transporter 1234829..1235668 Methylobacterium extorquens PA1 5834507 YP_001638607.1 CDS Mext_1132 NC_010172.1 1235736 1237451 D PFAM: protein kinase; Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: tyrosine protein kinase; protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: bja:bll2800 probable bifunctional serine/threonine kinase and phosphatase; protein kinase 1235736..1237451 Methylobacterium extorquens PA1 5834508 YP_001638608.1 CDS Mext_1133 NC_010172.1 1238255 1240273 R PFAM: glycosyl transferase family 2; KEGG: smd:Smed_3726 cellulose synthase (UDP-forming); cellulose synthase complement(1238255..1240273) Methylobacterium extorquens PA1 5834408 YP_001638609.1 CDS Mext_1134 NC_010172.1 1240255 1241490 R KEGG: ret:RHE_PE00362 hypothetical protein; hypothetical protein complement(1240255..1241490) Methylobacterium extorquens PA1 5834409 YP_001638610.1 CDS Mext_1135 NC_010172.1 1243196 1243561 D hypothetical protein 1243196..1243561 Methylobacterium extorquens PA1 5834410 YP_001638611.1 CDS Mext_1136 NC_010172.1 1243691 1244494 D PFAM: acetate and butyrate kinase; KEGG: xau:Xaut_3252 acetate kinase; acetate and butyrate kinase 1243691..1244494 Methylobacterium extorquens PA1 5834422 YP_001638612.1 CDS Mext_1137 NC_010172.1 1244511 1245395 D KEGG: xau:Xaut_2306 hypothetical protein; hypothetical protein 1244511..1245395 Methylobacterium extorquens PA1 5834423 YP_001638613.1 CDS Mext_1138 NC_010172.1 1245379 1246221 R PFAM: protein of unknown function DUF344; KEGG: nha:Nham_0877 protein of unknown function DUF344; hypothetical protein complement(1245379..1246221) Methylobacterium extorquens PA1 5834424 YP_001638614.1 CDS Mext_1139 NC_010172.1 1246263 1249454 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: xau:Xaut_4353 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family protein complement(1246263..1249454) Methylobacterium extorquens PA1 5834083 YP_001638615.1 CDS Mext_1140 NC_010172.1 1249460 1250584 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xau:Xaut_4352 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(1249460..1250584) Methylobacterium extorquens PA1 5834084 YP_001638616.1 CDS Mext_1142 NC_010172.1 1251043 1251492 R KEGG: xau:Xaut_2894 protein of unknown function DUF395 YeeE/YedE; hypothetical protein complement(1251043..1251492) Methylobacterium extorquens PA1 5834655 YP_001638617.1 CDS Mext_1143 NC_010172.1 1251496 1251921 R PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: xau:Xaut_2895 protein of unknown function DUF395 YeeE/YedE; hypothetical protein complement(1251496..1251921) Methylobacterium extorquens PA1 5834656 YP_001638618.1 CDS Mext_1145 NC_010172.1 1254392 1254730 R PFAM: regulatory protein ArsR; transcriptional regulator TrmB; KEGG: rme:Rmet_2370 transcriptional regulator, ArsR family; regulatory protein ArsR complement(1254392..1254730) Methylobacterium extorquens PA1 5835143 YP_001638619.1 CDS Mext_1146 NC_010172.1 1255147 1256052 R KEGG: xau:Xaut_2619 ABC transporter related; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; nitrate ABC transporter ATPases C and D complement(1255147..1256052) Methylobacterium extorquens PA1 5835144 YP_001638620.1 CDS Mext_1147 NC_010172.1 1256136 1256975 R TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO2772 putative nitrate ABC transporter (permease protein) (NtrB-like protein); nitrate ABC transporter inner membrane subunit complement(1256136..1256975) Methylobacterium extorquens PA1 5835145 YP_001638621.1 CDS Mext_1148 NC_010172.1 1256980 1258341 R KEGG: bja:bll5734 ABC transporter nitrate-binding protein; ABC transporter nitrate-binding protein complement(1256980..1258341) Methylobacterium extorquens PA1 5835256 YP_001638622.1 CDS Mext_1149 NC_010172.1 1258507 1259841 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rubredoxin-type Fe(Cys)4 protein; KEGG: pol:Bpro_4853 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein complement(1258507..1259841) Methylobacterium extorquens PA1 5835257 YP_001638623.1 CDS Mext_1150 NC_010172.1 1259838 1261031 R KEGG: pol:Bpro_4852 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase-like protein complement(1259838..1261031) Methylobacterium extorquens PA1 5835258 YP_001638624.1 CDS Mext_1151 NC_010172.1 1261091 1261642 R PFAM: OsmC family protein; KEGG: mfa:Mfla_2175 OsmC-like protein; OsmC family protein complement(1261091..1261642) Methylobacterium extorquens PA1 5835866 YP_001638625.1 CDS Mext_1152 NC_010172.1 1261855 1263459 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pol:Bpro_4849 transcriptional regulator, NifA subfamily, fis family; sigma-54 factor interaction domain-containing protein complement(1261855..1263459) Methylobacterium extorquens PA1 5835867 YP_001638626.1 CDS Mext_1153 NC_010172.1 1263830 1264846 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bps:BPSS1864 AraC-family regulatory protein; ThiJ/PfpI domain-containing protein complement(1263830..1264846) Methylobacterium extorquens PA1 5835868 YP_001638627.1 CDS Mext_1154 NC_010172.1 1264897 1265601 D PFAM: ThiJ/PfpI domain protein; KEGG: sfu:Sfum_2623 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 1264897..1265601 Methylobacterium extorquens PA1 5834713 YP_001638628.1 CDS Mext_1155 NC_010172.1 1265676 1267244 R TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: mxa:MXAN_5858 probable cation:acetate symporter ActP; SSS family solute/sodium (Na+) symporter complement(1265676..1267244) Methylobacterium extorquens PA1 5834714 YP_001638629.1 CDS Mext_1156 NC_010172.1 1267255 1267551 R PFAM: protein of unknown function DUF485; KEGG: mxa:MXAN_5857 hypothetical protein; hypothetical protein complement(1267255..1267551) Methylobacterium extorquens PA1 5834715 YP_001638630.1 CDS Mext_1157 NC_010172.1 1267660 1268769 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rpa:RPA1563 putative nitrilase; nitrilase complement(1267660..1268769) Methylobacterium extorquens PA1 5833939 YP_001638631.1 CDS Mext_1158 NC_010172.1 1268872 1269825 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpa:RPA3387 transcriptional regulator, LysR family; LysR substrate-binding protein complement(1268872..1269825) Methylobacterium extorquens PA1 5833940 YP_001638632.1 CDS Mext_1159 NC_010172.1 1270434 1271138 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mes:Meso_3107 RNA polymerase, sigma-24 subunit, ECF subfamily; sigma-70 family RNA polymerase sigma factor 1270434..1271138 Methylobacterium extorquens PA1 5833941 YP_001638633.1 CDS Mext_1160 NC_010172.1 1271624 1271920 R PFAM: helix-turn-helix domain protein; KEGG: ccr:CC_1006 transcriptional regulator, Cro/CI family; helix-turn-helix domain-containing protein complement(1271624..1271920) Methylobacterium extorquens PA1 5834509 YP_001638634.1 CDS Mext_1161 NC_010172.1 1272280 1274043 D KEGG: rru:Rru_B0039 type I secretion system ATPase, PrtD; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 1272280..1274043 Methylobacterium extorquens PA1 5834510 YP_001638635.1 CDS Mext_1162 NC_010172.1 1274047 1275429 D TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: ccr:CC_1009 RsaA secretion system, membrane protein RsaE; HlyD family type I secretion membrane fusion protein 1274047..1275429 Methylobacterium extorquens PA1 5834511 YP_001638636.1 CDS Mext_1163 NC_010172.1 1275508 1279917 D KEGG: lma:LmjF35.0540 proteophosphoglycan 5; hypothetical protein 1275508..1279917 Methylobacterium extorquens PA1 5833951 YP_001638637.1 CDS Mext_1164 NC_010172.1 1280056 1282014 R PFAM: glycosyl transferase family 2; KEGG: bbt:BBta_3605 putative glycosyltransferase, possibly the catalytic subunit of a cellulose synthase; cellulose synthase complement(1280056..1282014) Methylobacterium extorquens PA1 5833952 YP_001638638.1 CDS Mext_1165 NC_010172.1 1282011 1283186 R KEGG: nha:Nham_4220 hypothetical protein; hypothetical protein complement(1282011..1283186) Methylobacterium extorquens PA1 5833953 YP_001638639.1 CDS Mext_1166 NC_010172.1 1283222 1284976 R KEGG: bbt:BBta_3603 hypothetical protein; hypothetical protein complement(1283222..1284976) Methylobacterium extorquens PA1 5834880 YP_001638640.1 CDS Mext_1167 NC_010172.1 1286131 1286931 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_2775 ABC transporter related; ABC transporter-like protein complement(1286131..1286931) Methylobacterium extorquens PA1 5834881 YP_001638641.1 CDS Mext_1168 NC_010172.1 1286925 1287923 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_2776 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1286925..1287923) Methylobacterium extorquens PA1 5834882 YP_001638642.1 CDS Mext_1169 NC_010172.1 1287933 1289018 R KEGG: xau:Xaut_2774 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein complement(1287933..1289018) Methylobacterium extorquens PA1 5832419 YP_001638643.1 CDS Mext_1170 NC_010172.1 1289556 1290701 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pde:Pden_5014 acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein 1289556..1290701 Methylobacterium extorquens PA1 5832420 YP_001638644.1 CDS Mext_1171 NC_010172.1 1290720 1291817 D PFAM: luciferase family protein; KEGG: pde:Pden_5013 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 1290720..1291817 Methylobacterium extorquens PA1 5832421 YP_001638645.1 CDS Mext_1172 NC_010172.1 1291817 1292758 D TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bbt:BBta_3309 putative alkanesulfonate ABC transporter, substrate binding protein; aliphatic sulfonate ABC transporter substrate-binding protein 1291817..1292758 Methylobacterium extorquens PA1 5832448 YP_001638646.1 CDS Mext_1173 NC_010172.1 1292784 1293326 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: pde:Pden_5003 cupin 2, conserved barrel domain protein; cupin 1292784..1293326 Methylobacterium extorquens PA1 5832449 YP_001638647.1 CDS Mext_1174 NC_010172.1 1293438 1293728 D KEGG: rrs:RoseRS_1758 O-acetylhomoserine/O-acetylserine sulfhydrylase; O-acetylhomoserine sulfhydrylase-like protein 1293438..1293728 Methylobacterium extorquens PA1 5832450 YP_001638648.1 CDS Mext_1175 NC_010172.1 1293993 1294196 D hypothetical protein 1293993..1294196 Methylobacterium extorquens PA1 5832462 YP_001638649.1 CDS Mext_1176 NC_010172.1 1294282 1295127 D KEGG: ccr:CC_2651 serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein; serine O-acetyltransferase 1294282..1295127 Methylobacterium extorquens PA1 5832463 YP_001638650.1 CDS Mext_1177 NC_010172.1 1295548 1296939 D PFAM: cyclic nucleotide-binding; KEGG: mxa:MXAN_6249 cyclic nucleotide-binding domain protein; cyclic nucleotide-binding protein 1295548..1296939 Methylobacterium extorquens PA1 5832464 YP_001638651.1 CDS Mext_1178 NC_010172.1 1296926 1298944 D TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mpt:Mpe_A0023 putative cysteine desulfurase; SufS subfamily cysteine desulfurase 1296926..1298944 Methylobacterium extorquens PA1 5832122 YP_001638652.1 CDS Mext_1179 NC_010172.1 1299020 1300051 R KEGG: acr:Acry_1763 hypothetical protein; hypothetical protein complement(1299020..1300051) Methylobacterium extorquens PA1 5832123 YP_001638653.1 CDS Mext_1180 NC_010172.1 1300642 1300887 D KEGG: mxa:MXAN_4110 transcriptional regulator, LysR family; LysR family transcriptional regulator 1300642..1300887 Methylobacterium extorquens PA1 5832124 YP_001638654.1 CDS Mext_1181 NC_010172.1 1301268 1302245 D PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpc:RPC_4596 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1301268..1302245 Methylobacterium extorquens PA1 5832151 YP_001638655.1 CDS Mext_1182 NC_010172.1 1302473 1303342 D KEGG: xau:Xaut_2341 porin; porin 1302473..1303342 Methylobacterium extorquens PA1 5832152 YP_001638656.1 CDS Mext_1183 NC_010172.1 1303731 1303982 D hypothetical protein 1303731..1303982 Methylobacterium extorquens PA1 5832153 YP_001638657.1 CDS Mext_1184 NC_010172.1 1303994 1304407 D PFAM: protein of unknown function DUF1236; KEGG: rpe:RPE_0234 protein of unknown function DUF1236; hypothetical protein 1303994..1304407 Methylobacterium extorquens PA1 5831621 YP_001638658.1 CDS Mext_1185 NC_010172.1 1305778 1305987 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ccr:CC_2903 cold-shock domain family protein; DNA-binding cold-shock protein 1305778..1305987 Methylobacterium extorquens PA1 5831622 YP_001638659.1 CDS Mext_1186 NC_010172.1 1306195 1306440 D KEGG: bra:BRADO3284 hypothetical protein; putative signal peptide; putative signal peptide 1306195..1306440 Methylobacterium extorquens PA1 5831623 YP_001638660.1 CDS Mext_1187 NC_010172.1 1306597 1306929 R hypothetical protein complement(1306597..1306929) Methylobacterium extorquens PA1 5834411 YP_001638661.1 CDS Mext_1188 NC_010172.1 1307285 1309243 D KEGG: psb:Psyr_3815 hypothetical protein; hypothetical protein 1307285..1309243 Methylobacterium extorquens PA1 5834412 YP_001638662.1 CDS Mext_1189 NC_010172.1 1309415 1310146 R KEGG: mpt:Mpe_A2803 putative ABC-type Co2+ transport system, periplasmic component; putative ABC-type Co2+ transport system, periplasmic component complement(1309415..1310146) Methylobacterium extorquens PA1 5834413 YP_001638663.1 CDS Mext_1190 NC_010172.1 1310553 1313678 R KEGG: ccr:CC_0836 sensor histidine kinase, putative; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein complement(1310553..1313678) Methylobacterium extorquens PA1 5832821 YP_001638664.1 CDS Mext_1191 NC_010172.1 1313860 1314558 R PFAM: membrane protein of uknown function UCP014873; KEGG: smd:Smed_0077 membrane protein of uknown function UCP014873; hypothetical protein complement(1313860..1314558) Methylobacterium extorquens PA1 5832822 YP_001638665.1 CDS Mext_1192 NC_010172.1 1314999 1316966 D in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen 1314999..1316966 Methylobacterium extorquens PA1 5832823 YP_001638666.1 CDS Mext_1193 NC_010172.1 1317265 1318296 D KEGG: nwi:Nwi_0010 hypothetical protein; hypothetical protein 1317265..1318296 Methylobacterium extorquens PA1 5832853 YP_001638667.1 CDS ureE NC_010172.1 1318586 1319044 D involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 1318586..1319044 Methylobacterium extorquens PA1 5832854 YP_001638668.1 CDS Mext_1195 NC_010172.1 1319049 1319729 D PFAM: Urease accessory protein UreF; KEGG: bra:BRADO5865 putative urease accessory protein UreF; urease accessory protein UreF 1319049..1319729 Methylobacterium extorquens PA1 5832855 YP_001638669.1 CDS Mext_1196 NC_010172.1 1319743 1320438 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; bifunctional urease subunit gamma/beta 1319743..1320438 Methylobacterium extorquens PA1 5832042 YP_001638670.1 CDS ureC NC_010172.1 1320454 1322166 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 1320454..1322166 Methylobacterium extorquens PA1 5832043 YP_001638671.1 CDS Mext_1198 NC_010172.1 1322163 1322807 D TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: bbt:BBta_1963 urease accessory protein UreG; urease accessory protein UreG 1322163..1322807 Methylobacterium extorquens PA1 5832044 YP_001638672.1 CDS Mext_1199 NC_010172.1 1322807 1323691 D PFAM: Urease accessory protein UreD; KEGG: bra:BRADO5861 putative urease accessory protein UreD; urease accessory protein UreD 1322807..1323691 Methylobacterium extorquens PA1 5831505 YP_001638673.1 CDS Mext_1200 NC_010172.1 1323881 1325122 D TIGRFAM: urea ABC transporter, urea binding protein; KEGG: rpd:RPD_3864 amide-UreA binding protein; urea ABC transporter urea binding protein 1323881..1325122 Methylobacterium extorquens PA1 5831506 YP_001638674.1 CDS Mext_1201 NC_010172.1 1325138 1326334 R PFAM: protein of unknown function DUF1624; KEGG: pap:PSPA7_5557 hypothetical protein; hypothetical protein complement(1325138..1326334) Methylobacterium extorquens PA1 5831507 YP_001638675.1 CDS Mext_1202 NC_010172.1 1326334 1328478 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pae:PA4837 probable outer membrane protein; TonB-dependent siderophore receptor complement(1326334..1328478) Methylobacterium extorquens PA1 5832215 YP_001638676.1 CDS Mext_1203 NC_010172.1 1329285 1330475 D KEGG: rpc:RPC_3188 hypothetical protein; hypothetical protein 1329285..1330475 Methylobacterium extorquens PA1 5832216 YP_001638677.1 CDS Mext_1204 NC_010172.1 1330597 1330965 R KEGG: mlo:mlr0593 hypothetical protein; hypothetical protein complement(1330597..1330965) Methylobacterium extorquens PA1 5832217 YP_001638678.1 CDS Mext_1205 NC_010172.1 1330998 1331441 R PFAM: OsmC family protein; KEGG: acr:Acry_2200 OsmC family protein; OsmC family protein complement(1330998..1331441) Methylobacterium extorquens PA1 5832774 YP_001638679.1 CDS Mext_1206 NC_010172.1 1331708 1332157 D KEGG: pol:Bpro_2802 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS sensor protein 1331708..1332157 Methylobacterium extorquens PA1 5832775 YP_001638680.1 CDS Mext_1207 NC_010172.1 1332258 1333508 D catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA; formyl-coenzyme A transferase 1332258..1333508 Methylobacterium extorquens PA1 5832776 YP_001638681.1 CDS Mext_1208 NC_010172.1 1334066 1334785 R PFAM: phospholipase/Carboxylesterase; KEGG: xau:Xaut_0060 phospholipase/carboxylesterase; phospholipase/carboxylesterase complement(1334066..1334785) Methylobacterium extorquens PA1 5832856 YP_001638682.1 CDS Mext_1209 NC_010172.1 1335051 1336802 R catalyzes the formation of formyl-CoA from oxalyl-CoA; putative oxalyl-CoA decarboxylase complement(1335051..1336802) Methylobacterium extorquens PA1 5832857 YP_001638683.1 CDS Mext_1210 NC_010172.1 1337278 1339623 R PFAM: Domain of unknown function DUF1929; KEGG: gvi:gll4251 similarity to galactose oxidase; galactose oxidase complement(1337278..1339623) Methylobacterium extorquens PA1 5832858 YP_001638684.1 CDS Mext_1211 NC_010172.1 1339922 1341247 R PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll3149 putative oxalate:formate antiporter; major facilitator transporter complement(1339922..1341247) Methylobacterium extorquens PA1 5832451 YP_001638685.1 CDS Mext_1212 NC_010172.1 1341512 1342810 R PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_B1702 oxalate / formate antiporter, MFS-type, OFA family; major facilitator transporter complement(1341512..1342810) Methylobacterium extorquens PA1 5832452 YP_001638686.1 CDS Mext_1213 NC_010172.1 1343351 1343791 D PFAM: CBS domain containing protein; KEGG: ttj:TTHA0349 CBS domain protein; hypothetical protein 1343351..1343791 Methylobacterium extorquens PA1 5832453 YP_001638687.1 CDS Mext_1214 NC_010172.1 1343946 1344239 D hypothetical protein 1343946..1344239 Methylobacterium extorquens PA1 5831251 YP_001638688.1 CDS Mext_1215 NC_010172.1 1344262 1346118 D KEGG: rbe:RBE_0615 hypothetical protein; hypothetical protein 1344262..1346118 Methylobacterium extorquens PA1 5831252 YP_001638689.1 CDS Mext_1216 NC_010172.1 1346338 1346505 D hypothetical protein 1346338..1346505 Methylobacterium extorquens PA1 5831253 YP_001638690.1 CDS Mext_1217 NC_010172.1 1346853 1348142 R TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bra:BRADO4956 putative formyl-CoA transferase; formyl-CoA transferase complement(1346853..1348142) Methylobacterium extorquens PA1 5833142 YP_001638691.1 CDS Mext_1218 NC_010172.1 1348478 1349230 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: xau:Xaut_0485 transcriptional regulator, GntR family; GntR family transcriptional regulator 1348478..1349230 Methylobacterium extorquens PA1 5833143 YP_001638692.1 CDS Mext_1219 NC_010172.1 1349363 1350463 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: xau:Xaut_1926 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K complement(1349363..1350463) Methylobacterium extorquens PA1 5833144 YP_001638693.1 CDS Mext_1220 NC_010172.1 1350595 1352100 R PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: rpb:RPB_1345 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase complement(1350595..1352100) Methylobacterium extorquens PA1 5831870 YP_001638694.1 CDS Mext_1221 NC_010172.1 1352372 1353010 D KEGG: bbr:BB3075 hypothetical protein; hypothetical protein 1352372..1353010 Methylobacterium extorquens PA1 5831871 YP_001638695.1 CDS Mext_1222 NC_010172.1 1353174 1353611 D hypothetical protein 1353174..1353611 Methylobacterium extorquens PA1 5831872 YP_001638696.1 CDS Mext_1223 NC_010172.1 1353704 1353988 D hypothetical protein 1353704..1353988 Methylobacterium extorquens PA1 5832946 YP_001638697.1 CDS Mext_1224 NC_010172.1 1354081 1355322 R PFAM: monooxygenase FAD-binding; KEGG: sma:SAV1134 hydroxylase; FAD-binding monooxygenase complement(1354081..1355322) Methylobacterium extorquens PA1 5832947 YP_001638698.1 CDS Mext_1225 NC_010172.1 1356155 1356511 D TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: rpe:RPE_3943 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; queuosine biosynthesis protein QueD 1356155..1356511 Methylobacterium extorquens PA1 5832948 YP_001638699.1 CDS Mext_1226 NC_010172.1 1356514 1357245 D TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: xau:Xaut_1874 ExsB protein; exsB protein 1356514..1357245 Methylobacterium extorquens PA1 5833258 YP_001638700.1 CDS Mext_1227 NC_010172.1 1357256 1357993 D PFAM: LmbE family protein; KEGG: rpd:RPD_0576 LmbE-like protein; LmbE family protein 1357256..1357993 Methylobacterium extorquens PA1 5833259 YP_001638701.1 CDS Mext_1228 NC_010172.1 1358051 1358923 D PFAM: glycosyl transferase family 2; KEGG: rba:RB4337 similar to glycosyl transferase; glycosyl transferase family protein 1358051..1358923 Methylobacterium extorquens PA1 5833260 YP_001638702.1 CDS Mext_1229 NC_010172.1 1359317 1359499 D KEGG: sme:SMb20340 hypothetical protein; hypothetical protein 1359317..1359499 Methylobacterium extorquens PA1 5831731 YP_001638703.1 CDS Mext_1230 NC_010172.1 1359790 1360083 D hypothetical protein 1359790..1360083 Methylobacterium extorquens PA1 5831732 YP_001638704.1 CDS Mext_1231 NC_010172.1 1360231 1361280 R KEGG: rba:RB4336 hypothetical protein; hypothetical protein complement(1360231..1361280) Methylobacterium extorquens PA1 5831733 YP_001638705.1 CDS Mext_1232 NC_010172.1 1361340 1362428 R PFAM: glycosyl transferase family 2; KEGG: rpd:RPD_0578 glycosyl transferase, family 2; glycosyl transferase family protein complement(1361340..1362428) Methylobacterium extorquens PA1 5833034 YP_001638706.1 CDS Mext_1233 NC_010172.1 1362433 1363599 R PFAM: glycosyl transferase group 1; KEGG: rba:RB4333 probable galactosyltransferase; group 1 glycosyl transferase complement(1362433..1363599) Methylobacterium extorquens PA1 5833035 YP_001638707.1 CDS Mext_1234 NC_010172.1 1364042 1364365 R TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: xau:Xaut_2849 phosphotransferase system, phosphocarrier protein HPr; HPr family phosphocarrier protein complement(1364042..1364365) Methylobacterium extorquens PA1 5833036 YP_001638708.1 CDS Mext_1235 NC_010172.1 1364517 1364918 R PFAM: PTS system fructose subfamily IIA component; KEGG: nha:Nham_0440 PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA complement(1364517..1364918) Methylobacterium extorquens PA1 5831794 YP_001638709.1 CDS Mext_1236 NC_010172.1 1365044 1365571 R KEGG: rpb:RPB_0465 HPr kinase; HPr kinase complement(1365044..1365571) Methylobacterium extorquens PA1 5831795 YP_001638710.1 CDS Mext_1237 NC_010172.1 1365568 1367418 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpd:RPD_0368 ATP-binding region, ATPase-like; ATPase domain-containing protein complement(1365568..1367418) Methylobacterium extorquens PA1 5831796 YP_001638711.1 CDS Mext_1238 NC_010172.1 1367447 1368160 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpd:RPD_0367 response regulator receiver; response regulator receiver complement(1367447..1368160) Methylobacterium extorquens PA1 5832036 YP_001638712.1 CDS Mext_1239 NC_010172.1 1368559 1369374 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mes:Meso_2207 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1368559..1369374 Methylobacterium extorquens PA1 5832037 YP_001638713.1 CDS Mext_1240 NC_010172.1 1369520 1371340 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1369520..1371340 Methylobacterium extorquens PA1 5832038 YP_001638714.1 CDS Mext_1241 NC_010172.1 1371780 1373033 D TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: rpa:RPA1807 possible heavy metal efflux pump, HlyD family secretion protein; RND family efflux transporter MFP subunit 1371780..1373033 Methylobacterium extorquens PA1 5833195 YP_001638715.1 CDS Mext_1242 NC_010172.1 1373125 1376295 D TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: nha:Nham_3298 heavy metal efflux pump CzcA; CzcA family heavy metal efflux protein 1373125..1376295 Methylobacterium extorquens PA1 5833196 YP_001638716.1 CDS Mext_1243 NC_010172.1 1376429 1376584 R KEGG: cvi:CV_3051 probable transcriptional regulator lacI family; LacI family transcriptional regulator complement(1376429..1376584) Methylobacterium extorquens PA1 5833197 YP_001638717.1 CDS Mext_1244 NC_010172.1 1376751 1377836 R hypothetical protein complement(1376751..1377836) Methylobacterium extorquens PA1 5833065 YP_001638718.1 CDS Mext_1245 NC_010172.1 1377885 1381073 R PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bme:BMEI1055 penicillin-binding protein 1A; glycosyl transferase family protein complement(1377885..1381073) Methylobacterium extorquens PA1 5833066 YP_001638719.1 CDS Mext_1246 NC_010172.1 1381141 1382340 R KEGG: pla:Plav_2552 hypothetical protein; hypothetical protein complement(1381141..1382340) Methylobacterium extorquens PA1 5833067 YP_001638720.1 CDS Mext_1247 NC_010172.1 1382524 1383723 R KEGG: bra:BRADO7005 conserved hypothetical protein; putative flagellin C-ter domain; hypothetical protein complement(1382524..1383723) Methylobacterium extorquens PA1 5833040 YP_001638721.1 CDS Mext_1248 NC_010172.1 1383927 1384343 D PFAM: flagellar FlbT family protein; KEGG: pla:Plav_2550 flagellar FlbT family protein; flagellar FlbT family protein 1383927..1384343 Methylobacterium extorquens PA1 5833041 YP_001638722.1 CDS Mext_1249 NC_010172.1 1384443 1384658 R hypothetical protein complement(1384443..1384658) Methylobacterium extorquens PA1 5833042 YP_001638723.1 CDS Mext_1250 NC_010172.1 1384753 1385916 R PFAM: acyltransferase 3; KEGG: rpe:RPE_4819 acyltransferase 3; acyltransferase 3 complement(1384753..1385916) Methylobacterium extorquens PA1 5832520 YP_001638724.1 CDS Mext_1251 NC_010172.1 1386220 1387605 D PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dar:Daro_2752 metal-dependent phosphohydrolase, HD subdomain; metal-dependent phosphohydrolase 1386220..1387605 Methylobacterium extorquens PA1 5832521 YP_001638725.1 CDS Mext_1252 NC_010172.1 1387707 1388084 R KEGG: sil:SPO3438 hypothetical protein; hypothetical protein complement(1387707..1388084) Methylobacterium extorquens PA1 5832522 YP_001638726.1 CDS Mext_1253 NC_010172.1 1388261 1388689 D PFAM: protein of unknown function DUF442; KEGG: atc:AGR_L_2726 hypothetical protein; hypothetical protein 1388261..1388689 Methylobacterium extorquens PA1 5831225 YP_001638727.1 CDS Mext_1254 NC_010172.1 1388820 1389572 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential; methionine aminopeptidase complement(1388820..1389572) Methylobacterium extorquens PA1 5831226 YP_001638728.1 CDS Mext_1255 NC_010172.1 1390196 1390855 D KEGG: afw:Anae109_3322 hypothetical protein; hypothetical protein 1390196..1390855 Methylobacterium extorquens PA1 5831227 YP_001638729.1 CDS Mext_1256 NC_010172.1 1390890 1391807 R KEGG: xau:Xaut_4179 hypothetical protein; hypothetical protein complement(1390890..1391807) Methylobacterium extorquens PA1 5831636 YP_001638730.1 CDS Mext_1257 NC_010172.1 1392182 1393039 R PFAM: protein of unknown function DUF849; KEGG: xau:Xaut_4047 protein of unknown function DUF849; hypothetical protein complement(1392182..1393039) Methylobacterium extorquens PA1 5831637 YP_001638731.1 CDS Mext_1258 NC_010172.1 1393039 1394394 R PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: xau:Xaut_4048 two component, sigma54 specific, transcriptional regulator, fis family; sigma-54 factor interaction domain-containing protein complement(1393039..1394394) Methylobacterium extorquens PA1 5831638 YP_001638732.1 CDS Mext_1259 NC_010172.1 1394384 1396264 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xau:Xaut_4049 histidine kinase; ATPase domain-containing protein complement(1394384..1396264) Methylobacterium extorquens PA1 5831248 YP_001638733.1 CDS Mext_1260 NC_010172.1 1396528 1397409 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_4050 ABC transporter related; ABC transporter-like protein complement(1396528..1397409) Methylobacterium extorquens PA1 5831249 YP_001638734.1 CDS Mext_1261 NC_010172.1 1397418 1398239 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_4051 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1397418..1398239) Methylobacterium extorquens PA1 5831250 YP_001638735.1 CDS Mext_1262 NC_010172.1 1398252 1399232 R KEGG: xau:Xaut_4052 NMT1/THI5 like domain protein; NMT1/THI5-like domain-containing protein complement(1398252..1399232) Methylobacterium extorquens PA1 5832642 YP_001638736.1 CDS minC NC_010172.1 1399496 1400233 R blocks the formation of polar Z-ring septums; septum formation inhibitor complement(1399496..1400233) Methylobacterium extorquens PA1 5832643 YP_001638737.1 CDS Mext_1264 NC_010172.1 1400357 1401646 R KEGG: pla:Plav_3284 hypothetical protein; hypothetical protein complement(1400357..1401646) Methylobacterium extorquens PA1 5832644 YP_001638738.1 CDS Mext_1265 NC_010172.1 1401964 1403790 D TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: rpd:RPD_0699 GTP-binding protein TypA; GTP-binding protein TypA 1401964..1403790 Methylobacterium extorquens PA1 5833371 YP_001638739.1 CDS Mext_1266 NC_010172.1 1403933 1405621 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; CHASE3 domain protein; KEGG: rpb:RPB_2961 methyl-accepting chemotaxis sensory transducer; chemotaxis sensory transducer protein complement(1403933..1405621) Methylobacterium extorquens PA1 5833372 YP_001638740.1 CDS minC NC_010172.1 1406041 1406679 D blocks the formation of polar Z-ring septums; septum formation inhibitor 1406041..1406679 Methylobacterium extorquens PA1 5833373 YP_001638741.1 CDS Mext_1268 NC_010172.1 1406692 1407507 D TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: acr:Acry_1991 septum site-determining protein MinD; septum site-determining protein MinD 1406692..1407507 Methylobacterium extorquens PA1 5833265 YP_001638742.1 CDS Mext_1269 NC_010172.1 1407504 1407791 D TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: smd:Smed_4342 cell division topological specificity factor MinE; cell division topological specificity factor MinE 1407504..1407791 Methylobacterium extorquens PA1 5833266 YP_001638743.1 CDS Mext_1270 NC_010172.1 1408067 1409446 R PFAM: cytochrome P450; KEGG: rpe:RPE_0057 cytochrome P450; cytochrome P450 complement(1408067..1409446) Methylobacterium extorquens PA1 5833267 YP_001638744.1 CDS Mext_1271 NC_010172.1 1409561 1410595 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bra:BRADO1816 putative gluconolactonase; SMP-30/gluconolaconase/LRE domain-containing protein 1409561..1410595 Methylobacterium extorquens PA1 5833650 YP_001638745.1 CDS Mext_1273 NC_010172.1 1412611 1413573 D KEGG: mjl:Mjls_4980 putative dehydrogenase protein; dehydrogenase 1412611..1413573 Methylobacterium extorquens PA1 5833652 YP_001638746.1 CDS Mext_1274 NC_010172.1 1414548 1416032 D PFAM: Carbohydrate-selective porin OprB; KEGG: gbe:GbCGDNIH1_1489 porin; carbohydrate-selective porin OprB 1414548..1416032 Methylobacterium extorquens PA1 5832324 YP_001638747.1 CDS Mext_1275 NC_010172.1 1416132 1416326 R KEGG: xau:Xaut_2677 transposase IS4 family protein; transposase IS4 family protein complement(1416132..1416326) Methylobacterium extorquens PA1 5832325 YP_001638748.1 CDS Mext_1276 NC_010172.1 1416487 1416831 R KEGG: neu:NE2536 integrase, catalytic core; hypothetical protein complement(1416487..1416831) Methylobacterium extorquens PA1 5832326 YP_001638749.1 CDS Mext_1277 NC_010172.1 1416957 1418753 D PFAM: extracellular solute-binding protein family 5; KEGG: rle:pRL120434 putative substrate-binding component of ABC transporter; extracellular solute-binding protein 1416957..1418753 Methylobacterium extorquens PA1 5831829 YP_001638750.1 CDS Mext_1278 NC_010172.1 1418912 1419865 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA0760 putative oligopeptide ABC transporter, permease component; binding-protein-dependent transport system inner membrane protein 1418912..1419865 Methylobacterium extorquens PA1 5831830 YP_001638751.1 CDS Mext_1279 NC_010172.1 1419882 1420817 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA0759 putative oligopeptide ABC transporter, permease component; binding-protein-dependent transport system inner membrane protein 1419882..1420817 Methylobacterium extorquens PA1 5831831 YP_001638752.1 CDS Mext_1280 NC_010172.1 1420814 1421869 D KEGG: pol:Bpro_0383 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1420814..1421869 Methylobacterium extorquens PA1 5835851 YP_001638753.1 CDS Mext_1281 NC_010172.1 1421866 1422900 D KEGG: pol:Bpro_0384 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1421866..1422900 Methylobacterium extorquens PA1 5835852 YP_001638754.1 CDS Mext_1282 NC_010172.1 1423261 1424760 R TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: xau:Xaut_3248 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase complement(1423261..1424760) Methylobacterium extorquens PA1 5835853 YP_001638755.1 CDS Mext_1283 NC_010172.1 1424826 1425302 R PFAM: cyclase/dehydrase; carbon monoxide dehydrogenase subunit G; KEGG: sme:SMc01132 hypothetical protein; carbon monoxide dehydrogenase subunit G complement(1424826..1425302) Methylobacterium extorquens PA1 5832496 YP_001638756.1 CDS Mext_1284 NC_010172.1 1425332 1426036 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO4579 putative branched-chain amino acid ABC transporter, ATP-binding protein (LivF-like); ABC transporter-like protein complement(1425332..1426036) Methylobacterium extorquens PA1 5832497 YP_001638757.1 CDS Mext_1285 NC_010172.1 1426029 1426799 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll6233 ABC transporter ATP-binding protein; ABC transporter-like protein complement(1426029..1426799) Methylobacterium extorquens PA1 5832498 YP_001638758.1 CDS Mext_1286 NC_010172.1 1426796 1427809 R PFAM: inner-membrane translocator; KEGG: bbt:BBta_3735 putative branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator complement(1426796..1427809) Methylobacterium extorquens PA1 5834469 YP_001638759.1 CDS Mext_1287 NC_010172.1 1427821 1428711 R PFAM: inner-membrane translocator; KEGG: bbt:BBta_3734 putative branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator complement(1427821..1428711) Methylobacterium extorquens PA1 5834470 YP_001638760.1 CDS Mext_1288 NC_010172.1 1428729 1429976 R PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_3733 putative branched-chain amino acid ABC transporter, periplasmic-binding protein; extracellular ligand-binding receptor complement(1428729..1429976) Methylobacterium extorquens PA1 5834471 YP_001638761.1 CDS Mext_1289 NC_010172.1 1430043 1432421 R PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bra:BRADO4584 putative carbon-monoxide dehydrogenase large subunit, CoxL-like protein; carbon-monoxide dehydrogenase complement(1430043..1432421) Methylobacterium extorquens PA1 5831211 YP_001638762.1 CDS Mext_1290 NC_010172.1 1432418 1432921 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bbt:BBta_3731 putative carbon-monoxide dehydrogenase small subunit, CoxS-like protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein complement(1432418..1432921) Methylobacterium extorquens PA1 5831212 YP_001638763.1 CDS Mext_1291 NC_010172.1 1432918 1433796 R PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bja:bll6239 probable carbon monoxide dehydrogenase medium chain; FAD-binding molybdopterin dehydrogenase complement(1432918..1433796) Methylobacterium extorquens PA1 5831213 YP_001638764.1 CDS Mext_1292 NC_010172.1 1433925 1434620 D PFAM: regulatory protein TetR; KEGG: bja:blr6240 transcriptional regulatory protein; regulatory protein TetR 1433925..1434620 Methylobacterium extorquens PA1 5835000 YP_001638765.1 CDS Mext_1293 NC_010172.1 1435419 1436654 D KEGG: bbt:BBta_6028 N-carbamoyl-L-amino acid hydrolase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein; amidase 1435419..1436654 Methylobacterium extorquens PA1 5835001 YP_001638766.1 CDS Mext_1294 NC_010172.1 1437005 1438342 D catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 1437005..1438342 Methylobacterium extorquens PA1 5835002 YP_001638767.1 CDS Mext_1295 NC_010172.1 1438670 1439086 D KEGG: xau:Xaut_3248 methylmalonate-semialdehyde dehydrogenase; NAD-dependent aldehyde dehydrogenase-like protein 1438670..1439086 Methylobacterium extorquens PA1 5834877 YP_001638768.1 CDS Mext_1296 NC_010172.1 1439284 1439610 D KEGG: bur:Bcep18194_C7468 transcriptional regulator, LysR family; LysR family transcriptional regulator 1439284..1439610 Methylobacterium extorquens PA1 5834878 YP_001638769.1 CDS Mext_1297 NC_010172.1 1439727 1440035 R hypothetical protein complement(1439727..1440035) Methylobacterium extorquens PA1 5834879 YP_001638770.1 CDS Mext_1298 NC_010172.1 1440309 1443644 R PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: rsh:Rsph17029_3540 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase complement(1440309..1443644) Methylobacterium extorquens PA1 5833930 YP_001638771.1 CDS Mext_1299 NC_010172.1 1443923 1445161 R TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: sfu:Sfum_0727 ammonium transporter; ammonium transporter complement(1443923..1445161) Methylobacterium extorquens PA1 5833931 YP_001638772.1 CDS Mext_1300 NC_010172.1 1445255 1446268 R TIGRFAM: urea transporter; PFAM: Urea transporter; KEGG: bmb:BruAb1_1360 hypothetical urea transporter; urea transporter complement(1445255..1446268) Methylobacterium extorquens PA1 5833932 YP_001638773.1 CDS Mext_1301 NC_010172.1 1446284 1447219 R PFAM: Urease accessory protein UreD; KEGG: yen:YE0957 urease accessory protein; urease accessory protein UreD complement(1446284..1447219) Methylobacterium extorquens PA1 5835731 YP_001638774.1 CDS Mext_1302 NC_010172.1 1447224 1447871 R TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: bov:BOV_1317 urease accessory protein UreG; urease accessory protein UreG complement(1447224..1447871) Methylobacterium extorquens PA1 5835732 YP_001638775.1 CDS Mext_1303 NC_010172.1 1447892 1448614 R PFAM: Urease accessory protein UreF; KEGG: yen:YE0955 urease accessory protein; urease accessory protein UreF complement(1447892..1448614) Methylobacterium extorquens PA1 5835733 YP_001638776.1 CDS Mext_1304 NC_010172.1 1448614 1449267 R PFAM: UreE urease accessory domain protein; KEGG: bov:BOV_1315 putative urease accessory protein UreE; UreE urease accessory domain-containing protein complement(1448614..1449267) Methylobacterium extorquens PA1 5835825 YP_001638777.1 CDS ccrB NC_010172.1 1449291 1449674 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(1449291..1449674) Methylobacterium extorquens PA1 5835826 YP_001638778.1 CDS Mext_1306 NC_010172.1 1449684 1450067 R TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: ypm:YP_2478 putative membrane protein; CrcB protein complement(1449684..1450067) Methylobacterium extorquens PA1 5835827 YP_001638779.1 CDS ureC NC_010172.1 1450129 1451847 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(1450129..1451847) Methylobacterium extorquens PA1 5835183 YP_001638780.1 CDS Mext_1308 NC_010172.1 1451884 1452294 R KEGG: bmb:BruAb1_1354 UreB-2, urease, beta subunit; TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit; urease subunit beta complement(1451884..1452294) Methylobacterium extorquens PA1 5835184 YP_001638781.1 CDS Mext_1309 NC_010172.1 1452319 1452621 R KEGG: yen:YE0951 urease gamma subunit; TIGRFAM: urease, gamma subunit; PFAM: Urease gamma subunit region; urease subunit gamma complement(1452319..1452621) Methylobacterium extorquens PA1 5835185 YP_001638782.1 CDS Mext_1310 NC_010172.1 1453261 1455375 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mpt:Mpe_A2804 outer membrane receptor protein; TonB-dependent receptor plug 1453261..1455375 Methylobacterium extorquens PA1 5834864 YP_001638783.1 CDS Mext_1311 NC_010172.1 1455372 1456103 D KEGG: mpt:Mpe_A2803 putative ABC-type Co2+ transport system, periplasmic component; putative ABC-type Co2+ transport system, periplasmic component 1455372..1456103 Methylobacterium extorquens PA1 5834865 YP_001638784.1 CDS Mext_1312 NC_010172.1 1456506 1457117 D KEGG: bam:Bamb_2344 membrane protein-like protein; hypothetical protein 1456506..1457117 Methylobacterium extorquens PA1 5834866 YP_001638785.1 CDS Mext_1313 NC_010172.1 1457187 1457588 R transposase and inactivated derivatives; KEGG: hch:HCH_04570 transposase and inactivated derivatives; transposase-like protein complement(1457187..1457588) Methylobacterium extorquens PA1 5835259 YP_001638786.1 CDS Mext_1314 NC_010172.1 1457606 1458013 D hypothetical protein 1457606..1458013 Methylobacterium extorquens PA1 5835260 YP_001638787.1 CDS Mext_1315 NC_010172.1 1458985 1460109 D PFAM: glucose sorbosone dehydrogenase; KEGG: mes:Meso_2552 glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase 1458985..1460109 Methylobacterium extorquens PA1 5834225 YP_001638788.1 CDS Mext_1316 NC_010172.1 1460143 1461078 R PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_5011 putative alpha/beta hydrolase; alpha/beta hydrolase fold protein complement(1460143..1461078) Methylobacterium extorquens PA1 5834226 YP_001638789.1 CDS Mext_1317 NC_010172.1 1461471 1461677 R KEGG: sme:SMa1515 hypothetical protein; hypothetical protein complement(1461471..1461677) Methylobacterium extorquens PA1 5835179 YP_001638790.1 CDS Mext_1318 NC_010172.1 1462158 1462823 D KEGG: afw:Anae109_0554 protein of unknown function DUF1468; hypothetical protein 1462158..1462823 Methylobacterium extorquens PA1 5835180 YP_001638791.1 CDS Mext_1319 NC_010172.1 1462840 1464345 D PFAM: protein of unknown function DUF112 transmembrane; KEGG: afw:Anae109_0553 protein of unknown function DUF112 transmembrane; hypothetical protein 1462840..1464345 Methylobacterium extorquens PA1 5835181 YP_001638792.1 CDS Mext_1320 NC_010172.1 1464411 1465382 D PFAM: conserved hypothetical protein; KEGG: afw:Anae109_0552 uncharacterized protein UPF0065; hypothetical protein 1464411..1465382 Methylobacterium extorquens PA1 5835182 YP_001638793.1 CDS Mext_1321 NC_010172.1 1465693 1466508 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rle:pRL110509 putative oxidoreductase; short-chain dehydrogenase/reductase SDR 1465693..1466508 Methylobacterium extorquens PA1 5831579 YP_001638794.1 CDS Mext_1322 NC_010172.1 1467633 1468271 R KEGG: nha:Nham_0159 phosphoglycerate mutase 1 family; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase; phosphoglycerate mutase complement(1467633..1468271) Methylobacterium extorquens PA1 5831580 YP_001638795.1 CDS Mext_1323 NC_010172.1 1468543 1469010 D KEGG: oan:Oant_1526 hypothetical protein; hypothetical protein 1468543..1469010 Methylobacterium extorquens PA1 5831581 YP_001638796.1 CDS Mext_1324 NC_010172.1 1469235 1469480 R hypothetical protein complement(1469235..1469480) Methylobacterium extorquens PA1 5831582 YP_001638797.1 CDS Mext_1325 NC_010172.1 1470403 1470981 D KEGG: ang:An11g08860 hypothetical protein; hypothetical protein 1470403..1470981 Methylobacterium extorquens PA1 5832045 YP_001638798.1 CDS Mext_1326 NC_010172.1 1471094 1471858 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pst:PSPTO_1056 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 1471094..1471858 Methylobacterium extorquens PA1 5832046 YP_001638799.1 CDS Mext_1327 NC_010172.1 1472181 1472423 D hypothetical protein 1472181..1472423 Methylobacterium extorquens PA1 5832047 YP_001638800.1 CDS Mext_1328 NC_010172.1 1472512 1473402 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: xau:Xaut_4571 alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase domain-containing protein complement(1472512..1473402) Methylobacterium extorquens PA1 5832048 YP_001638801.1 CDS Mext_1329 NC_010172.1 1474202 1477696 R KEGG: psp:PSPPH_1261 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS sensor protein complement(1474202..1477696) Methylobacterium extorquens PA1 5833236 YP_001638802.1 CDS Mext_1330 NC_010172.1 1478221 1479636 D PFAM: cytochrome P450; KEGG: atc:AGR_C_2890 cytochrome P450 hydroxylase; cytochrome P450 1478221..1479636 Methylobacterium extorquens PA1 5833237 YP_001638803.1 CDS Mext_1331 NC_010172.1 1479626 1482061 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: ccr:CC_0740 sensory box/GGDEF family protein; diguanylate cyclase 1479626..1482061 Methylobacterium extorquens PA1 5833238 YP_001638804.1 CDS Mext_1332 NC_010172.1 1482233 1483063 R PFAM: protein of unknown function DUF1194; KEGG: gbe:GbCGDNIH1_1872 hypothetical protein; hypothetical protein complement(1482233..1483063) Methylobacterium extorquens PA1 5833239 YP_001638805.1 CDS Mext_1333 NC_010172.1 1483076 1484053 R PFAM: ApbE family lipoprotein; KEGG: pna:Pnap_3962 ApbE family lipoprotein; ApbE family lipoprotein complement(1483076..1484053) Methylobacterium extorquens PA1 5831801 YP_001638806.1 CDS Mext_1334 NC_010172.1 1484058 1486175 R PFAM: FMN-binding domain protein; KEGG: pna:Pnap_3961 regulatory protein, putative; FMN-binding domain-containing protein complement(1484058..1486175) Methylobacterium extorquens PA1 5831802 YP_001638807.1 CDS Mext_1335 NC_010172.1 1486172 1487146 R TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: sil:SPO1513 hypothetical protein; hypothetical protein complement(1486172..1487146) Methylobacterium extorquens PA1 5831803 YP_001638808.1 CDS Mext_1336 NC_010172.1 1487236 1488462 R KEGG: sil:SPO1514 hypothetical protein; hypothetical protein complement(1487236..1488462) Methylobacterium extorquens PA1 5831804 YP_001638809.1 CDS Mext_1337 NC_010172.1 1488624 1489046 D KEGG: dar:Daro_1001 cytochrome c550; cytochrome c550 1488624..1489046 Methylobacterium extorquens PA1 5832154 YP_001638810.1 CDS Mext_1338 NC_010172.1 1489061 1489930 D SMART: extracellular solute-binding protein family 3; KEGG: swi:Swit_0692 extracellular solute-binding protein, family 3; extracellular solute-binding protein 1489061..1489930 Methylobacterium extorquens PA1 5832155 YP_001638811.1 CDS Mext_1339 NC_010172.1 1490231 1491994 D TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: swi:Swit_0693 pyrrolo-quinoline quinone; methanol/ethanol family PQQ-dependent dehydrogenase 1490231..1491994 Methylobacterium extorquens PA1 5832156 YP_001638812.1 CDS Mext_1340 NC_010172.1 1492316 1494160 R PFAM: major facilitator superfamily MFS_1; KEGG: rpa:RPA1880 putative membrane transport protein-major facilitator superfamily; major facilitator transporter complement(1492316..1494160) Methylobacterium extorquens PA1 5832157 YP_001638813.1 CDS Mext_1341 NC_010172.1 1494268 1494510 D hypothetical protein 1494268..1494510 Methylobacterium extorquens PA1 5831353 YP_001638814.1 CDS Mext_1342 NC_010172.1 1494730 1495410 R KEGG: pau:PA14_45090 hypothetical protein; hypothetical protein complement(1494730..1495410) Methylobacterium extorquens PA1 5831354 YP_001638815.1 CDS Mext_1343 NC_010172.1 1495419 1495712 R hypothetical protein complement(1495419..1495712) Methylobacterium extorquens PA1 5831355 YP_001638816.1 CDS Mext_1344 NC_010172.1 1495770 1495946 R hypothetical protein complement(1495770..1495946) Methylobacterium extorquens PA1 5831356 YP_001638817.1 CDS Mext_1345 NC_010172.1 1495943 1496440 R KEGG: mmw:Mmwyl1_0385 hypothetical protein; hypothetical protein complement(1495943..1496440) Methylobacterium extorquens PA1 5833512 YP_001638818.1 CDS Mext_1346 NC_010172.1 1496506 1497273 R KEGG: aba:Acid345_2422 hypothetical protein; hypothetical protein complement(1496506..1497273) Methylobacterium extorquens PA1 5833513 YP_001638819.1 CDS Mext_1347 NC_010172.1 1497336 1497662 D hypothetical protein 1497336..1497662 Methylobacterium extorquens PA1 5833514 YP_001638820.1 CDS Mext_1348 NC_010172.1 1497681 1498190 R KEGG: ret:RHE_PF00244 hypothetical protein; hypothetical protein complement(1497681..1498190) Methylobacterium extorquens PA1 5833515 YP_001638821.1 CDS Mext_1349 NC_010172.1 1498187 1500304 R PFAM: peptidase M48 Ste24p; KEGG: psb:Psyr_4950 peptidase M48, Ste24p; peptidase M48 Ste24p complement(1498187..1500304) Methylobacterium extorquens PA1 5832794 YP_001638822.1 CDS Mext_1350 NC_010172.1 1501056 1501274 D hypothetical protein 1501056..1501274 Methylobacterium extorquens PA1 5832795 YP_001638823.1 CDS Mext_1351 NC_010172.1 1501333 1501731 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: acr:Acry_2400 cupin 2, conserved barrel domain protein; cupin complement(1501333..1501731) Methylobacterium extorquens PA1 5832796 YP_001638824.1 CDS Mext_1352 NC_010172.1 1501765 1502613 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mba:Mbar_A0777 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1501765..1502613) Methylobacterium extorquens PA1 5832797 YP_001638825.1 CDS Mext_1353 NC_010172.1 1502631 1503545 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pst:PSPTO_2864 transcriptional regulator, LysR family; carbonate dehydratase complement(1502631..1503545) Methylobacterium extorquens PA1 5831782 YP_001638826.1 CDS Mext_1354 NC_010172.1 1503718 1504554 R PFAM: protein of unknown function DUF849; KEGG: bja:bll5461 hypothetical protein; hypothetical protein complement(1503718..1504554) Methylobacterium extorquens PA1 5831783 YP_001638827.1 CDS Mext_1355 NC_010172.1 1504593 1505534 D PFAM: UspA domain protein; KEGG: mlo:mlr6608 hypothetical protein; UspA domain-containing protein 1504593..1505534 Methylobacterium extorquens PA1 5831784 YP_001638828.1 CDS Mext_1356 NC_010172.1 1505525 1505860 D PFAM: cytochrome c class I; KEGG: rpa:RPA4235 putative cytochrome c, class I; cytochrome c class I 1505525..1505860 Methylobacterium extorquens PA1 5831785 YP_001638829.1 CDS Mext_1357 NC_010172.1 1505936 1506688 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rpd:RPD_1357 regulatory protein, Crp; cyclic nucleotide-binding protein complement(1505936..1506688) Methylobacterium extorquens PA1 5832564 YP_001638830.1 CDS Mext_1358 NC_010172.1 1507076 1508704 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpe:BP0263 probable ATP-binding component of ABC transporter; ABC transporter-like protein complement(1507076..1508704) Methylobacterium extorquens PA1 5832565 YP_001638831.1 CDS Mext_1359 NC_010172.1 1508701 1510344 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccr:CC_0761 ABC transporter, ATP-binding protein CydD; ABC transporter-like protein complement(1508701..1510344) Methylobacterium extorquens PA1 5832566 YP_001638832.1 CDS Mext_1360 NC_010172.1 1510444 1512033 D PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: mms:mma_2014 cytochrome bd-I oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I 1510444..1512033 Methylobacterium extorquens PA1 5832567 YP_001638833.1 CDS Mext_1361 NC_010172.1 1512094 1513248 D KEGG: rle:pRL90279 putative transmembrane cytochrome bd-II oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 1512094..1513248 Methylobacterium extorquens PA1 5832163 YP_001638834.1 CDS Mext_1362 NC_010172.1 1513318 1513449 D TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: bpa:BPP4023 hypothetical protein; cyd operon protein YbgT 1513318..1513449 Methylobacterium extorquens PA1 5832164 YP_001638835.1 CDS Mext_1363 NC_010172.1 1513486 1514238 R PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: pst:PSPTO_3191 transcriptional regulator, DeoR family; regulatory protein DeoR complement(1513486..1514238) Methylobacterium extorquens PA1 5832165 YP_001638836.1 CDS Mext_1364 NC_010172.1 1514405 1515988 R PFAM: Amidase; KEGG: cmi:CMM_2656 putative amidase; amidase complement(1514405..1515988) Methylobacterium extorquens PA1 5832166 YP_001638837.1 CDS Mext_1365 NC_010172.1 1516506 1518932 D PFAM: response regulator receiver; histidine kinase A domain protein; KEGG: rle:RL2731 putative two-component sensor histidine kinase transcriptional regulatory protein; response regulator receiver 1516506..1518932 Methylobacterium extorquens PA1 5831335 YP_001638838.1 CDS Mext_1366 NC_010172.1 1519065 1519877 D KEGG: rpa:RPA3787 hypothetical protein; hypothetical protein 1519065..1519877 Methylobacterium extorquens PA1 5831336 YP_001638839.1 CDS Mext_1367 NC_010172.1 1520215 1522710 D KEGG: atc:AGR_L_3021 hypothetical protein; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; cellulose synthase catalytic subunit 1520215..1522710 Methylobacterium extorquens PA1 5831337 YP_001638840.1 CDS Mext_1368 NC_010172.1 1522707 1525352 D KEGG: atc:AGR_L_3024 hypothetical protein; hypothetical protein 1522707..1525352 Methylobacterium extorquens PA1 5831338 YP_001638841.1 CDS Mext_1369 NC_010172.1 1525352 1526611 D PFAM: glycoside hydrolase family 8; KEGG: smd:Smed_5210 cellulase; cellulase 1525352..1526611 Methylobacterium extorquens PA1 5831228 YP_001638842.1 CDS Mext_1370 NC_010172.1 1526596 1528659 D KEGG: ret:RHE_CH01545 hypothetical protein; hypothetical protein 1526596..1528659 Methylobacterium extorquens PA1 5831229 YP_001638843.1 CDS Mext_1371 NC_010172.1 1528656 1529669 D KEGG: mmu:100042292 similar to CG10953-PA; hypothetical protein 1528656..1529669 Methylobacterium extorquens PA1 5831230 YP_001638844.1 CDS Mext_1372 NC_010172.1 1536085 1536366 D KEGG: sit:TM1040_3646 protein of unknown function DUF395, YeeE/YedE; hypothetical protein 1536085..1536366 Methylobacterium extorquens PA1 5832713 YP_001638845.1 CDS Mext_1373 NC_010172.1 1537142 1541053 R PFAM: glycosyl transferase group 1; KEGG: ppu:PP_1786 glycosyl transferase, putative; group 1 glycosyl transferase complement(1537142..1541053) Methylobacterium extorquens PA1 5832902 YP_001638846.1 CDS Mext_1374 NC_010172.1 1541689 1542582 D KEGG: bxe:Bxe_A3033 hypothetical protein; hypothetical protein 1541689..1542582 Methylobacterium extorquens PA1 5832903 YP_001638847.1 CDS Mext_1375 NC_010172.1 1542931 1543731 R KEGG: bbr:BB2662 hypothetical protein; hypothetical protein complement(1542931..1543731) Methylobacterium extorquens PA1 5833453 YP_001638848.1 CDS Mext_1376 NC_010172.1 1543787 1544350 R Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; RNA polymerase sigma factor complement(1543787..1544350) Methylobacterium extorquens PA1 5833454 YP_001638849.1 CDS Mext_1377 NC_010172.1 1544587 1545891 R PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mlo:mlr8397 hypothetical protein; peptidoglycan binding domain-containing protein complement(1544587..1545891) Methylobacterium extorquens PA1 5833455 YP_001638850.1 CDS Mext_1378 NC_010172.1 1546630 1547727 D PFAM: protein of unknown function DUF461; nuclear export factor GLE1; KEGG: bra:BRADO5142 conserved hypothetical protein; putative signal peptide; putative nuclear export factor GLE1 domain; hypothetical protein 1546630..1547727 Methylobacterium extorquens PA1 5833456 YP_001638851.1 CDS Mext_1379 NC_010172.1 1547843 1548367 D PFAM: protein of unknown function DUF461; KEGG: xau:Xaut_0418 protein of unknown function DUF461; hypothetical protein 1547843..1548367 Methylobacterium extorquens PA1 5832573 YP_001638852.1 CDS Mext_1380 NC_010172.1 1548357 1549004 D PFAM: electron transport protein SCO1/SenC; KEGG: bra:BRADO6747 putative electron transport protein (SCO1/SenC/PrrC-like); electron transport protein SCO1/SenC 1548357..1549004 Methylobacterium extorquens PA1 5832574 YP_001638853.1 CDS Mext_1381 NC_010172.1 1549147 1549503 D hypothetical protein 1549147..1549503 Methylobacterium extorquens PA1 5832575 YP_001638854.1 CDS Mext_1382 NC_010172.1 1549546 1551699 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_B2704 TonB-dependent receptor; TonB-dependent receptor 1549546..1551699 Methylobacterium extorquens PA1 5832576 YP_001638855.1 CDS Mext_1383 NC_010172.1 1551946 1553793 D PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: rle:RL2172 putative peptidase; peptidase C14 caspase catalytic subunit p20 1551946..1553793 Methylobacterium extorquens PA1 5831236 YP_001638856.1 CDS Mext_1384 NC_010172.1 1553944 1555416 R PFAM: Carbohydrate-selective porin OprB; KEGG: bra:BRADO6357 putative carbohydrate porin, OprB family; carbohydrate-selective porin OprB complement(1553944..1555416) Methylobacterium extorquens PA1 5831237 YP_001638857.1 CDS Mext_1385 NC_010172.1 1555521 1556192 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mpt:Mpe_A2899 putative GntR-family transcription regulator; GntR family transcriptional regulator complement(1555521..1556192) Methylobacterium extorquens PA1 5831238 YP_001638858.1 CDS Mext_1386 NC_010172.1 1556356 1557378 D PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rpa:RPA2543 TrapT family, DctP subunit, C4-dicarboxylate periplasmic binding protein; TRAP dicarboxylate transporter subunit DctP 1556356..1557378 Methylobacterium extorquens PA1 5831239 YP_001638859.1 CDS Mext_1387 NC_010172.1 1557375 1558100 D PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: rpa:RPA2542 possible TrapT family, DctQ subunit, C4-dicarboxylate transport; tripartite ATP-independent periplasmic transporter DctQ 1557375..1558100 Methylobacterium extorquens PA1 5831740 YP_001638860.1 CDS Mext_1388 NC_010172.1 1558097 1559449 D TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpa:RPA2541 TrapT family, DctM subunit, C4-dicarboxylate transport; TRAP dicarboxylate transporter subunit DctM 1558097..1559449 Methylobacterium extorquens PA1 5831741 YP_001638861.1 CDS Mext_1389 NC_010172.1 1559617 1559814 D hypothetical protein 1559617..1559814 Methylobacterium extorquens PA1 5831742 YP_001638862.1 CDS Mext_1390 NC_010172.1 1560607 1560840 D hypothetical protein 1560607..1560840 Methylobacterium extorquens PA1 5831743 YP_001638863.1 CDS Mext_1391 NC_010172.1 1560908 1561954 D PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: sit:TM1040_1439 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta 1560908..1561954 Methylobacterium extorquens PA1 5833138 YP_001638864.1 CDS Mext_1392 NC_010172.1 1562067 1562222 D hypothetical protein 1562067..1562222 Methylobacterium extorquens PA1 5833139 YP_001638865.1 CDS Mext_1393 NC_010172.1 1562238 1563713 R PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpe:RPE_0242 peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein complement(1562238..1563713) Methylobacterium extorquens PA1 5833140 YP_001638866.1 CDS Mext_1394 NC_010172.1 1563827 1564339 D PFAM: protein of unknown function DUF606; KEGG: bcz:pE33L466_0268 hypothetical protein; hypothetical protein 1563827..1564339 Methylobacterium extorquens PA1 5833141 YP_001638867.1 CDS Mext_1395 NC_010172.1 1564452 1569770 D PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: rpa:RPA2553 hypothetical protein; alpha-2-macroglobulin domain-containing protein 1564452..1569770 Methylobacterium extorquens PA1 5831483 YP_001638868.1 CDS Mext_1396 NC_010172.1 1569775 1572078 D TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: bbt:BBta_3916 penicillin-binding protein 1C (PBP-1C); penicillin-binding protein 1C 1569775..1572078 Methylobacterium extorquens PA1 5831484 YP_001638869.1 CDS Mext_1397 NC_010172.1 1572213 1572533 D PFAM: small multidrug resistance protein; KEGG: swi:Swit_3611 small multidrug resistance protein; small multidrug resistance protein 1572213..1572533 Methylobacterium extorquens PA1 5831485 YP_001638870.1 CDS Mext_1398 NC_010172.1 1572538 1573338 R PFAM: helix-turn-helix domain protein; KEGG: bbt:BBta_0665 hypothetical protein; helix-turn-helix domain-containing protein complement(1572538..1573338) Methylobacterium extorquens PA1 5831486 YP_001638871.1 CDS Mext_1399 NC_010172.1 1573390 1574013 R TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: bja:bll0976 sortase, putative; sortase family protein complement(1573390..1574013) Methylobacterium extorquens PA1 5832589 YP_001638872.1 CDS Mext_1400 NC_010172.1 1574010 1576208 R PFAM: von Willebrand factor type A; Vault protein inter-alpha-trypsin domain protein; SMART: Vault protein inter-alpha-trypsin, metazoa; KEGG: bja:bll0977 hypothetical protein; vault protein inter-alpha-trypsin subunit complement(1574010..1576208) Methylobacterium extorquens PA1 5832590 YP_001638873.1 CDS Mext_1401 NC_010172.1 1576387 1577064 D PFAM: Phosphoglycerate mutase; KEGG: acr:Acry_0137 phosphoglycerate mutase; phosphoglycerate mutase 1576387..1577064 Methylobacterium extorquens PA1 5832591 YP_001638874.1 CDS Mext_1402 NC_010172.1 1577055 1577786 R hypothetical protein complement(1577055..1577786) Methylobacterium extorquens PA1 5832592 YP_001638875.1 CDS Mext_1403 NC_010172.1 1577849 1578862 R PFAM: high-affinity nickel-transporter; KEGG: rpe:RPE_4806 high-affinity nickel-transporter; high-affinity nickel-transporter complement(1577849..1578862) Methylobacterium extorquens PA1 5833091 YP_001638876.1 CDS Mext_1404 NC_010172.1 1578853 1579530 R PFAM: protein of unknown function DUF1007; KEGG: rpa:RPA0873 hypothetical protein; hypothetical protein complement(1578853..1579530) Methylobacterium extorquens PA1 5833092 YP_001638877.1 CDS Mext_1405 NC_010172.1 1579645 1580106 R PFAM: cytochrome C biogenesis protein; KEGG: xau:Xaut_1658 cytochrome c biogenesis protein; cytochrome C biogenesis protein complement(1579645..1580106) Methylobacterium extorquens PA1 5833093 YP_001638878.1 CDS Mext_1406 NC_010172.1 1580103 1582103 R PFAM: cytochrome c assembly protein; KEGG: ret:RHE_CH01291 cytochrome-C-type synthesis protein; cytochrome c assembly protein complement(1580103..1582103) Methylobacterium extorquens PA1 5833094 YP_001638879.1 CDS Mext_1407 NC_010172.1 1582150 1582683 R PFAM: CcmE/CycJ protein; KEGG: rpe:RPE_1933 CcmE/CycJ protein; CcmE/CycJ protein complement(1582150..1582683) Methylobacterium extorquens PA1 5832198 YP_001638880.1 CDS Mext_1408 NC_010172.1 1582846 1584504 R KEGG: rpe:RPE_1932 tetratricopeptide TPR_2; TIGRFAM: cytochrome c-type biogenesis protein CcmI; PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; cytochrome c-type biogenesis protein CcmI complement(1582846..1584504) Methylobacterium extorquens PA1 5832199 YP_001638881.1 CDS Mext_1409 NC_010172.1 1584576 1585991 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bra:BRADO2729 putative two-component sensor histidine kinase; ATPase domain-containing protein complement(1584576..1585991) Methylobacterium extorquens PA1 5832200 YP_001638882.1 CDS Mext_1410 NC_010172.1 1585988 1586458 R KEGG: rpc:RPC_1461 hypothetical protein; hypothetical protein complement(1585988..1586458) Methylobacterium extorquens PA1 5832201 YP_001638883.1 CDS Mext_1411 NC_010172.1 1586805 1587482 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bja:blr3121 two-component response regulator; response regulator receiver complement(1586805..1587482) Methylobacterium extorquens PA1 5833860 YP_001638884.1 CDS Mext_1412 NC_010172.1 1587521 1588078 R hypothetical protein complement(1587521..1588078) Methylobacterium extorquens PA1 5833861 YP_001638885.1 CDS Mext_1413 NC_010172.1 1588082 1588330 R hypothetical protein complement(1588082..1588330) Methylobacterium extorquens PA1 5833862 YP_001638886.1 CDS Mext_1414 NC_010172.1 1588351 1588704 R hypothetical protein complement(1588351..1588704) Methylobacterium extorquens PA1 5833863 YP_001638887.1 CDS Mext_1415 NC_010172.1 1588754 1589356 R hypothetical protein complement(1588754..1589356) Methylobacterium extorquens PA1 5831766 YP_001638888.1 CDS Mext_1416 NC_010172.1 1589390 1589953 R PFAM: glycoside hydrolase family 24; KEGG: bbk:BARBAKC583_0240 phage lysozyme; glycoside hydrolase family protein complement(1589390..1589953) Methylobacterium extorquens PA1 5831767 YP_001638889.1 CDS Mext_1417 NC_010172.1 1590074 1591156 R KEGG: pde:Pden_3078 hypothetical protein; hypothetical protein complement(1590074..1591156) Methylobacterium extorquens PA1 5831768 YP_001638890.1 CDS Mext_1418 NC_010172.1 1591181 1595089 R KEGG: nha:Nham_1426 gene transfer agent (GTA) orfg15, like protein; hypothetical protein complement(1591181..1595089) Methylobacterium extorquens PA1 5831769 YP_001638891.1 CDS Mext_1419 NC_010172.1 1595129 1595593 R TIGRFAM: phage cell wall peptidase, NlpC/P60 family; KEGG: nha:Nham_1425 putative phage cell wall peptidase, NlpC/P60; NlpC/P60 family phage cell wall peptidase complement(1595129..1595593) Methylobacterium extorquens PA1 5832609 YP_001638892.1 CDS Mext_1420 NC_010172.1 1595601 1596494 R PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_1179 hypothetical protein; hypothetical protein complement(1595601..1596494) Methylobacterium extorquens PA1 5832610 YP_001638893.1 CDS Mext_1421 NC_010172.1 1596505 1597146 R PFAM: conserved hypothetical protein; KEGG: rpc:RPC_1821 hypothetical protein; hypothetical protein complement(1596505..1597146) Methylobacterium extorquens PA1 5832611 YP_001638894.1 CDS Mext_1422 NC_010172.1 1597158 1597784 R KEGG: xau:Xaut_3164 gene transfer agent (GTA) orfg11; hypothetical protein complement(1597158..1597784) Methylobacterium extorquens PA1 5832612 YP_001638895.1 CDS Mext_1423 NC_010172.1 1597784 1598014 R KEGG: xau:Xaut_3163 phage conserved hypothetical protein; hypothetical protein complement(1597784..1598014) Methylobacterium extorquens PA1 5833827 YP_001638896.1 CDS Mext_1424 NC_010172.1 1598011 1598337 R KEGG: rpd:RPD_1984 gene transfer agent (GTA) orfg10; hypothetical protein complement(1598011..1598337) Methylobacterium extorquens PA1 5833828 YP_001638897.1 CDS Mext_1425 NC_010172.1 1598340 1598750 R TIGRFAM: phage major tail protein, TP901-1 family; KEGG: rpc:RPC_1816 phage major tail protein, TP901-1; TP901-1 family phage major tail protein complement(1598340..1598750) Methylobacterium extorquens PA1 5833829 YP_001638898.1 CDS Mext_1426 NC_010172.1 1598780 1599199 R KEGG: rpa:RPA1898 homologue of rhodobacter capsulatus gene transfer agent (GTA) orfg8 (32% identity); hypothetical protein complement(1598780..1599199) Methylobacterium extorquens PA1 5833830 YP_001638899.1 CDS Mext_1427 NC_010172.1 1599196 1599537 R TIGRFAM: phage head-tail adaptor; KEGG: pla:Plav_0909 phage head-tail adaptor, putative; phage head-tail adaptor complement(1599196..1599537) Methylobacterium extorquens PA1 5831617 YP_001638900.1 CDS Mext_1428 NC_010172.1 1599559 1600134 R KEGG: rpe:RPE_1914 phiE125 gp8 family protein; phiE125 gp8 family protein complement(1599559..1600134) Methylobacterium extorquens PA1 5831618 YP_001638901.1 CDS Mext_1429 NC_010172.1 1600168 1600923 D PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: rpb:RPB_3469 peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap 1600168..1600923 Methylobacterium extorquens PA1 5831619 YP_001638902.1 CDS Mext_1430 NC_010172.1 1601026 1601919 D PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: xau:Xaut_3157 peptidase S1 and S6 chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap 1601026..1601919 Methylobacterium extorquens PA1 5831620 YP_001638903.1 CDS Mext_1431 NC_010172.1 1601926 1603191 R TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: rpd:RPD_1970 phage major capsid protein, HK97; HK97 family phage major capsid protein complement(1601926..1603191) Methylobacterium extorquens PA1 5833622 YP_001638904.1 CDS Mext_1432 NC_010172.1 1603225 1603695 R TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: bov:BOV_0589 caudovirus prohead protease; HK97 family phage prohead protease complement(1603225..1603695) Methylobacterium extorquens PA1 5833623 YP_001638905.1 CDS Mext_1433 NC_010172.1 1603754 1604926 R TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: rpc:RPC_1801 phage portal protein, HK97; HK97 family phage portal protein complement(1603754..1604926) Methylobacterium extorquens PA1 5833624 YP_001638906.1 CDS Mext_1434 NC_010172.1 1604973 1606349 R PFAM: protein of unknown function DUF264; KEGG: xau:Xaut_3147 protein of unknown function DUF264; hypothetical protein complement(1604973..1606349) Methylobacterium extorquens PA1 5833625 YP_001638907.1 CDS Mext_1435 NC_010172.1 1607054 1607815 R TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rpe:RPE_2223 precorrin-3B C17-methyltransferase; precorrin-3B C(17)-methyltransferase complement(1607054..1607815) Methylobacterium extorquens PA1 5830950 YP_001638908.1 CDS Mext_1436 NC_010172.1 1607812 1608609 R TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bra:BRADO4904 precorrin-2 C(20)-methyltransferase; precorrin-2 C(20)-methyltransferase complement(1607812..1608609) Methylobacterium extorquens PA1 5830951 YP_001638909.1 CDS Mext_1437 NC_010172.1 1608609 1609241 R PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: bra:BRADO4905 precorrin-8X methylmutase; precorrin-8X methylmutase complement(1608609..1609241) Methylobacterium extorquens PA1 5830952 YP_001638910.1 CDS Mext_1438 NC_010172.1 1609248 1610534 R TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: xau:Xaut_3285 precorrin-3B synthase; precorrin-3B synthase complement(1609248..1610534) Methylobacterium extorquens PA1 5830953 YP_001638911.1 CDS cobN NC_010172.1 1610531 1613962 R with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN complement(1610531..1613962) Methylobacterium extorquens PA1 5831373 YP_001638912.1 CDS Mext_1440 NC_010172.1 1613976 1614872 R KEGG: xcb:XC_1486 hypothetical protein; hypothetical protein complement(1613976..1614872) Methylobacterium extorquens PA1 5831374 YP_001638913.1 CDS Mext_1441 NC_010172.1 1614869 1615903 R TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bbt:BBta_3143 putative cobalamin synthesis protein CobW; cobalamin biosynthesis protein CobW complement(1614869..1615903) Methylobacterium extorquens PA1 5831375 YP_001638914.1 CDS Mext_1442 NC_010172.1 1615900 1616358 R PFAM: protein of unknown function DUF1636; KEGG: sit:TM1040_2208 protein of unknown function DUF1636; hypothetical protein complement(1615900..1616358) Methylobacterium extorquens PA1 5831376 YP_001638915.1 CDS Mext_1443 NC_010172.1 1616351 1617118 R TIGRFAM: cobalt transporter, subunit CbtA; PFAM: Cobalt transporter subunit CbtA putative; KEGG: oan:Oant_1874 cobalt transporter, subunit CbtA; cobalt transporter subunit CbtA complement(1616351..1617118) Methylobacterium extorquens PA1 5832678 YP_001638916.1 CDS Mext_1444 NC_010172.1 1617149 1617331 R TIGRFAM: cobalt transporter, subunit CbtB; PFAM: Cobalt transporter subunit CbtB putative; KEGG: xau:Xaut_3774 cobalt transporter, subunit CbtB; cobalt transporter subunit CbtB complement(1617149..1617331) Methylobacterium extorquens PA1 5832679 YP_001638917.1 CDS Mext_1445 NC_010172.1 1617616 1618038 R PFAM: Protein of unknown function DUF1772; KEGG: xau:Xaut_3066 protein of unknown function DUF1772; hypothetical protein complement(1617616..1618038) Methylobacterium extorquens PA1 5832680 YP_001638918.1 CDS Mext_1446 NC_010172.1 1618025 1618543 R PFAM: regulatory protein MarR; KEGG: rso:RSc1851 putative transcription regulator protein; regulatory protein MarR complement(1618025..1618543) Methylobacterium extorquens PA1 5832337 YP_001638919.1 CDS Mext_1447 NC_010172.1 1618619 1619128 D PFAM: cobalbumin biosynthesis protein; KEGG: mlo:mll1308 cobinamide kinase; adenosylcobinamide-phosphate guanylyltransferase 1618619..1619128 Methylobacterium extorquens PA1 5832338 YP_001638920.1 CDS Mext_1448 NC_010172.1 1619128 1619730 D KEGG: mlo:mll1306 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 1619128..1619730 Methylobacterium extorquens PA1 5832339 YP_001638921.1 CDS fumC NC_010172.1 1620296 1621837 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1620296..1621837 Methylobacterium extorquens PA1 5835738 YP_001638922.1 CDS Mext_1450 NC_010172.1 1621952 1622491 R TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: xau:Xaut_1627 formaldehyde-activating enzyme (Fae); formaldehyde-activating enzyme complement(1621952..1622491) Methylobacterium extorquens PA1 5835739 YP_001638923.1 CDS Mext_1451 NC_010172.1 1622636 1622953 D hypothetical protein 1622636..1622953 Methylobacterium extorquens PA1 5835740 YP_001638924.1 CDS Mext_1452 NC_010172.1 1622978 1623424 R hypothetical protein complement(1622978..1623424) Methylobacterium extorquens PA1 5835741 YP_001638925.1 CDS Mext_1453 NC_010172.1 1623645 1624529 D PFAM: alpha/beta hydrolase fold; KEGG: bja:blr0418 putative epoxide hydrolase; alpha/beta hydrolase fold protein 1623645..1624529 Methylobacterium extorquens PA1 5835788 YP_001638926.1 CDS Mext_1454 NC_010172.1 1624825 1626879 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mag:amb3804 methyl-accepting chemotaxis protein; chemotaxis sensory transducer protein 1624825..1626879 Methylobacterium extorquens PA1 5835789 YP_001638927.1 CDS Mext_1455 NC_010172.1 1626941 1630219 R KEGG: nha:Nham_0235 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein complement(1626941..1630219) Methylobacterium extorquens PA1 5835790 YP_001638928.1 CDS Mext_1456 NC_010172.1 1630332 1632422 R KEGG: nha:Nham_3254 hypothetical protein; hypothetical protein complement(1630332..1632422) Methylobacterium extorquens PA1 5835791 YP_001638929.1 CDS Mext_1457 NC_010172.1 1632613 1635450 R TIGRFAM: conserved hypothetical membrane protein; KEGG: bja:bll2463 hypothetical protein; hypothetical protein complement(1632613..1635450) Methylobacterium extorquens PA1 5835839 YP_001638930.1 CDS Mext_1458 NC_010172.1 1635464 1636378 R PFAM: protein of unknown function DUF58; KEGG: nwi:Nwi_2627 hypothetical protein; hypothetical protein complement(1635464..1636378) Methylobacterium extorquens PA1 5835840 YP_001638931.1 CDS Mext_1459 NC_010172.1 1636390 1637400 R PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: xau:Xaut_2948 ATPase associated with various cellular activities AAA_3; ATPase complement(1636390..1637400) Methylobacterium extorquens PA1 5835841 YP_001638932.1 CDS Mext_1460 NC_010172.1 1637597 1638031 D PFAM: thioesterase superfamily protein; KEGG: rpb:RPB_4340 thioesterase superfamily; thioesterase superfamily protein 1637597..1638031 Methylobacterium extorquens PA1 5835842 YP_001638933.1 CDS Mext_1461 NC_010172.1 1638028 1638609 D PFAM: protein of unknown function DUF1285; KEGG: bja:blr2466 hypothetical protein; hypothetical protein 1638028..1638609 Methylobacterium extorquens PA1 5835792 YP_001638934.1 CDS Mext_1462 NC_010172.1 1638606 1639286 D PFAM: NUDIX hydrolase; KEGG: xau:Xaut_2950 NUDIX hydrolase; NUDIX hydrolase 1638606..1639286 Methylobacterium extorquens PA1 5835793 YP_001638935.1 CDS Mext_1463 NC_010172.1 1639371 1639628 D KEGG: bra:BRADO1967 hypothetical protein; hypothetical protein 1639371..1639628 Methylobacterium extorquens PA1 5835794 YP_001638936.1 CDS Mext_1464 NC_010172.1 1639625 1640899 D PFAM: Polynucleotide adenylyltransferase region; KEGG: xau:Xaut_2952 polynucleotide adenylyltransferase region; polynucleotide adenylyltransferase 1639625..1640899 Methylobacterium extorquens PA1 5835795 YP_001638937.1 CDS atpC NC_010172.1 1640998 1641399 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(1640998..1641399) Methylobacterium extorquens PA1 5834566 YP_001638938.1 CDS Mext_1466 NC_010172.1 1641699 1643156 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(1641699..1643156) Methylobacterium extorquens PA1 5834567 YP_001638939.1 CDS Mext_1467 NC_010172.1 1643181 1644071 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(1643181..1644071) Methylobacterium extorquens PA1 5834568 YP_001638940.1 CDS Mext_1468 NC_010172.1 1644257 1645786 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(1644257..1645786) Methylobacterium extorquens PA1 5834569 YP_001638941.1 CDS Mext_1469 NC_010172.1 1645861 1646400 R TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: rpb:RPB_0268 ATP synthase F1, delta subunit; ATP synthase F1 subunit delta complement(1645861..1646400) Methylobacterium extorquens PA1 5835800 YP_001638942.1 CDS Mext_1470 NC_010172.1 1646699 1647769 R PFAM: ferrochelatase; KEGG: xau:Xaut_2814 ferrochelatase; ferrochelatase complement(1646699..1647769) Methylobacterium extorquens PA1 5835801 YP_001638943.1 CDS Mext_1471 NC_010172.1 1647961 1648932 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sru:SRU_0996 hypothetical protein; type 11 methyltransferase 1647961..1648932 Methylobacterium extorquens PA1 5835802 YP_001638944.1 CDS Mext_1472 NC_010172.1 1648940 1650457 D PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: mag:amb3606 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterase; 5'-nucleotidase 1648940..1650457 Methylobacterium extorquens PA1 5835803 YP_001638945.1 CDS Mext_1473 NC_010172.1 1650483 1651187 D PFAM: Uracil-DNA glycosylase superfamily; KEGG: pde:Pden_2138 uracil-DNA glycosylase; uracil-DNA glycosylase superfamily protein 1650483..1651187 Methylobacterium extorquens PA1 5831331 YP_001638946.1 CDS Mext_1474 NC_010172.1 1651430 1652260 D SMART: Rhodanese domain protein; KEGG: bja:blr5051 superoxide dismutase SodM-like protein; rhodanese domain-containing protein 1651430..1652260 Methylobacterium extorquens PA1 5831332 YP_001638947.1 CDS Mext_1475 NC_010172.1 1652263 1653666 D TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: bja:blr5052 putative chromate transport protein; chromate transporter 1652263..1653666 Methylobacterium extorquens PA1 5831333 YP_001638948.1 CDS Mext_1476 NC_010172.1 1653808 1654134 R hypothetical protein complement(1653808..1654134) Methylobacterium extorquens PA1 5831334 YP_001638949.1 CDS Mext_1477 NC_010172.1 1654139 1655041 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xau:Xaut_3112 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(1654139..1655041) Methylobacterium extorquens PA1 5832912 YP_001638950.1 CDS Mext_1478 NC_010172.1 1655516 1658428 D TIGRFAM: preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: xau:Xaut_0512 preprotein translocase, SecA subunit; preprotein translocase subunit SecA 1655516..1658428 Methylobacterium extorquens PA1 5832913 YP_001638951.1 CDS Mext_1479 NC_010172.1 1658442 1658852 D PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mlr4407 hypothetical protein; N-acetyltransferase GCN5 1658442..1658852 Methylobacterium extorquens PA1 5832914 YP_001638952.1 CDS ampC NC_010172.1 1658857 1660020 R PFAM: beta-lactamase; KEGG: msm:MSMEG_3978 beta-lactamase; beta-lactamase complement(1658857..1660020) Methylobacterium extorquens PA1 5832915 YP_001638953.1 CDS Mext_1481 NC_010172.1 1660171 1661058 D PFAM: 4'-phosphopantetheinyl transferase; KEGG: rpc:RPC_3373 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 1660171..1661058 Methylobacterium extorquens PA1 5831632 YP_001638954.1 CDS Mext_1482 NC_010172.1 1661055 1661510 D PFAM: NUDIX hydrolase; KEGG: ret:RHE_CH01183 hypothetical protein; NUDIX hydrolase 1661055..1661510 Methylobacterium extorquens PA1 5831633 YP_001638955.1 CDS Mext_1483 NC_010172.1 1661545 1662813 R TIGRFAM: esterase, PHB depolymerase family; KEGG: bbt:BBta_5379 putative esterase, PHB depolymerase; PHB depolymerase family esterase complement(1661545..1662813) Methylobacterium extorquens PA1 5831634 YP_001638956.1 CDS Mext_1484 NC_010172.1 1662884 1663333 R KEGG: nha:Nham_4274 putative transcriptional regulator, CopG family; CopG family transcriptional regulator complement(1662884..1663333) Methylobacterium extorquens PA1 5831635 YP_001638957.1 CDS Mext_1485 NC_010172.1 1663540 1664265 R KEGG: nwi:Nwi_0105 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon complement(1663540..1664265) Methylobacterium extorquens PA1 5830958 YP_001638958.1 CDS Mext_1486 NC_010172.1 1664373 1664657 D PFAM: protein of unknown function DUF497; KEGG: vei:Veis_2884 protein of unknown function DUF497; hypothetical protein 1664373..1664657 Methylobacterium extorquens PA1 5830959 YP_001638959.1 CDS Mext_1487 NC_010172.1 1664641 1664976 D SMART: helix-turn-helix domain protein; KEGG: sus:Acid_7034 hypothetical protein; helix-turn-helix domain-containing protein 1664641..1664976 Methylobacterium extorquens PA1 5830960 YP_001638960.1 CDS Mext_1488 NC_010172.1 1664948 1665601 R KEGG: mlo:mlr4493 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase complement(1664948..1665601) Methylobacterium extorquens PA1 5830961 YP_001638961.1 CDS Mext_1489 NC_010172.1 1665598 1666434 R TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: mes:Meso_3480 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase complement(1665598..1666434) Methylobacterium extorquens PA1 5832002 YP_001638962.1 CDS Mext_1490 NC_010172.1 1666463 1667476 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rpe:RPE_0509 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter complement(1666463..1667476) Methylobacterium extorquens PA1 5832003 YP_001638963.1 CDS Mext_1491 NC_010172.1 1667491 1668105 R TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: nwi:Nwi_0103 Maf-like protein; maf protein complement(1667491..1668105) Methylobacterium extorquens PA1 5832004 YP_001638964.1 CDS Mext_1492 NC_010172.1 1668122 1669258 R KEGG: acr:Acry_0382 capsular polysaccharide biosynthesis protein-like protein; capsular polysaccharide biosynthesis protein-like protein complement(1668122..1669258) Methylobacterium extorquens PA1 5832005 YP_001638965.1 CDS Mext_1493 NC_010172.1 1669270 1670142 R PFAM: protein of unknown function DUF299; KEGG: xau:Xaut_1827 protein of unknown function DUF299; hypothetical protein complement(1669270..1670142) Methylobacterium extorquens PA1 5833449 YP_001638966.1 CDS Mext_1494 NC_010172.1 1670848 1671960 D KEGG: bra:BRADO1875 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 1670848..1671960 Methylobacterium extorquens PA1 5833450 YP_001638967.1 CDS Mext_1495 NC_010172.1 1672014 1672454 D PFAM: conserved hypothetical protein; KEGG: bja:bll0636 hypothetical protein; hypothetical protein 1672014..1672454 Methylobacterium extorquens PA1 5833451 YP_001638968.1 CDS Mext_1496 NC_010172.1 1672540 1672881 D KEGG: ret:RHE_CH01705 hypothetical protein; hypothetical protein 1672540..1672881 Methylobacterium extorquens PA1 5833452 YP_001638969.1 CDS hisG NC_010172.1 1673030 1674007 R long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase complement(1673030..1674007) Methylobacterium extorquens PA1 5832560 YP_001638970.1 CDS hisZ NC_010172.1 1674004 1675167 R May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit complement(1674004..1675167) Methylobacterium extorquens PA1 5832561 YP_001638971.1 CDS Mext_1499 NC_010172.1 1675313 1676200 R TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: xau:Xaut_1844 HAD-superfamily hydrolase, subfamily IIA; HAD family hydrolase complement(1675313..1676200) Methylobacterium extorquens PA1 5832562 YP_001638972.1 CDS Mext_1500 NC_010172.1 1676321 1676971 R PFAM: regulatory protein TetR; KEGG: sit:TM1040_1583 transcriptional regulator, TetR family; regulatory protein TetR complement(1676321..1676971) Methylobacterium extorquens PA1 5832563 YP_001638973.1 CDS Mext_1501 NC_010172.1 1677163 1680579 D Synthesizes thioester adducts of fatty acids enzymatically to the phosphopantetheine group of acyl carrier protein; acylglycerophosphoethanolamine acyltransferase 1677163..1680579 Methylobacterium extorquens PA1 5833864 YP_001638974.1 CDS Mext_1502 NC_010172.1 1680724 1681125 D PFAM: protein of unknown function DUF1044; KEGG: plu:plu4467 hypothetical protein; hypothetical protein 1680724..1681125 Methylobacterium extorquens PA1 5833865 YP_001638975.1 CDS Mext_1503 NC_010172.1 1681109 1681432 D KEGG: sme:SMa2151 probable DNA-binding protein; putative DNA-binding protein 1681109..1681432 Methylobacterium extorquens PA1 5833866 YP_001638976.1 CDS Mext_1504 NC_010172.1 1681579 1682265 D PFAM: DSBA oxidoreductase; KEGG: mes:Meso_4108 DsbA oxidoreductase; DSBA oxidoreductase 1681579..1682265 Methylobacterium extorquens PA1 5833867 YP_001638977.1 CDS Mext_1505 NC_010172.1 1682287 1683279 R PFAM: Rubrerythrin; protein of unknown function DUF125 transmembrane; KEGG: sil:SPO3842 hypothetical protein; rubrerythrin complement(1682287..1683279) Methylobacterium extorquens PA1 5831200 YP_001638978.1 CDS Mext_1506 NC_010172.1 1683328 1684434 R KEGG: mpt:Mpe_B0545 carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein; carbonic anhydrase complement(1683328..1684434) Methylobacterium extorquens PA1 5831201 YP_001638979.1 CDS Mext_1507 NC_010172.1 1684501 1684962 D PFAM: molybdopterin biosynthesis MoaE protein; KEGG: mlo:mlr7915 molybdopterin converting factor, subunit 2; molybdopterin biosynthesis MoaE protein 1684501..1684962 Methylobacterium extorquens PA1 5831202 YP_001638980.1 CDS Mext_1508 NC_010172.1 1685027 1686232 D PFAM: protein of unknown function UPF0118; KEGG: bja:blr4959 hypothetical protein; hypothetical protein 1685027..1686232 Methylobacterium extorquens PA1 5831203 YP_001638981.1 CDS Mext_1509 NC_010172.1 1686270 1687976 R malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase complement(1686270..1687976) Methylobacterium extorquens PA1 5831434 YP_001638982.1 CDS Mext_1510 NC_010172.1 1688255 1689418 R PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: pna:Pnap_3742 VWA containing CoxE family protein; VWA containing CoxE family protein complement(1688255..1689418) Methylobacterium extorquens PA1 5831435 YP_001638983.1 CDS Mext_1512 NC_010172.1 1691746 1692846 R PFAM: ATPase associated with various cellular activities AAA_5; KEGG: rrs:RoseRS_4022 ATPase associated with various cellular activities, AAA_5; ATPase complement(1691746..1692846) Methylobacterium extorquens PA1 5831437 YP_001638984.1 CDS Mext_1514 NC_010172.1 1694424 1695791 R PFAM: zinc finger SWIM domain protein; KEGG: rha:RHA1_ro01904 hypothetical protein; zinc finger SWIM domain-containing protein complement(1694424..1695791) Methylobacterium extorquens PA1 5831394 YP_001638985.1 CDS Mext_1515 NC_010172.1 1695987 1697477 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(1695987..1697477) Methylobacterium extorquens PA1 5831395 YP_001638986.1 CDS Mext_1516 NC_010172.1 1697623 1697871 D TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: sme:SMb20062 hypothetical protein; addiction module antidote protein 1697623..1697871 Methylobacterium extorquens PA1 5831396 YP_001638987.1 CDS Mext_1517 NC_010172.1 1697868 1698158 D PFAM: plasmid stabilization system; KEGG: mbb:BCG_1998c hypothetical protein; plasmid stabilization system protein 1697868..1698158 Methylobacterium extorquens PA1 5833907 YP_001638988.1 CDS Mext_1518 NC_010172.1 1698180 1698878 D PFAM: Uracil-DNA glycosylase superfamily; KEGG: mlo:mll0558 hypothetical protein; uracil-DNA glycosylase superfamily protein 1698180..1698878 Methylobacterium extorquens PA1 5833908 YP_001638989.1 CDS Mext_1519 NC_010172.1 1698886 1700412 R KEGG: nwi:Nwi_1129 hypothetical protein; hypothetical protein complement(1698886..1700412) Methylobacterium extorquens PA1 5833909 YP_001638990.1 CDS Mext_1520 NC_010172.1 1700737 1701435 D type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 1700737..1701435 Methylobacterium extorquens PA1 5833910 YP_001638991.1 CDS Mext_1521 NC_010172.1 1701438 1701782 D PFAM: protein of unknown function DUF1330; KEGG: acr:Acry_1359 protein of unknown function DUF1330; hypothetical protein 1701438..1701782 Methylobacterium extorquens PA1 5832577 YP_001638992.1 CDS Mext_1522 NC_010172.1 1701802 1702425 R PFAM: regulatory protein TetR; KEGG: rpa:RPA4413 possible transcriptional regulator, TetR family; regulatory protein TetR complement(1701802..1702425) Methylobacterium extorquens PA1 5832578 YP_001638993.1 CDS Mext_1523 NC_010172.1 1702648 1702848 R hypothetical protein complement(1702648..1702848) Methylobacterium extorquens PA1 5832579 YP_001638994.1 CDS Mext_1524 NC_010172.1 1703051 1703557 R TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: sit:TM1040_0461 deoxyuridine 5'-triphosphate nucleotidohydrolase (dut); deoxyuridine 5'-triphosphate nucleotidohydrolase Dut complement(1703051..1703557) Methylobacterium extorquens PA1 5832580 YP_001638995.1 CDS Mext_1525 NC_010172.1 1703654 1704979 D PFAM: NUDIX hydrolase; KEGG: oan:Oant_1073 hypothetical protein; NUDIX hydrolase 1703654..1704979 Methylobacterium extorquens PA1 5833714 YP_001638996.1 CDS Mext_1526 NC_010172.1 1705207 1705893 D PFAM: carbonic anhydrase; KEGG: bpe:BP3425 putative carbonic anhydrase; carbonate dehydratase 1705207..1705893 Methylobacterium extorquens PA1 5833715 YP_001638997.1 CDS Mext_1527 NC_010172.1 1706112 1707035 R PFAM: inositol monophosphatase; KEGG: xau:Xaut_3486 3'(2'),5'-bisphosphate nucleotidase; inositol monophosphatase complement(1706112..1707035) Methylobacterium extorquens PA1 5833716 YP_001638998.1 CDS Mext_1528 NC_010172.1 1707397 1708137 D KEGG: xau:Xaut_3487 hypothetical protein; hypothetical protein 1707397..1708137 Methylobacterium extorquens PA1 5833717 YP_001638999.1 CDS Mext_1529 NC_010172.1 1708315 1711065 D PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: rpc:RPC_3803 CheA signal transduction histidine kinases; ATPase domain-containing protein 1708315..1711065 Methylobacterium extorquens PA1 5833868 YP_001639000.1 CDS Mext_1530 NC_010172.1 1711098 1711577 D PFAM: CheW domain protein; KEGG: rpc:RPC_3802 CheW protein; CheW domain-containing protein 1711098..1711577 Methylobacterium extorquens PA1 5833869 YP_001639001.1 CDS Mext_1531 NC_010172.1 1711598 1712020 D PFAM: response regulator receiver; KEGG: rpc:RPC_4245 response regulator receiver domain protein (CheY-like); response regulator receiver 1711598..1712020 Methylobacterium extorquens PA1 5833870 YP_001639002.1 CDS Mext_1532 NC_010172.1 1712087 1713235 D PFAM: CheB methylesterase; response regulator receiver; KEGG: bra:BRADO1476 chemotaxis response regulator protein CheB-glutamate methylesterase; protein-glutamate methylesterase 1712087..1713235 Methylobacterium extorquens PA1 5833871 YP_001639003.1 CDS Mext_1533 NC_010172.1 1713235 1714092 D PFAM: MCP methyltransferase CheR-type; KEGG: bra:BRADO1477 chemotaxis protein methyltransferase; protein-glutamate O-methyltransferase 1713235..1714092 Methylobacterium extorquens PA1 5831970 YP_001639004.1 CDS Mext_1534 NC_010172.1 1714139 1714864 D PFAM: Allophanate hydrolase subunit 1; KEGG: rpc:RPC_2624 hypothetical protein; allophanate hydrolase subunit 1 1714139..1714864 Methylobacterium extorquens PA1 5831971 YP_001639005.1 CDS Mext_1535 NC_010172.1 1714861 1715880 D KEGG: rpa:RPA2682 UreA amidolyase-related; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; urea amidolyase-like protein 1714861..1715880 Methylobacterium extorquens PA1 5831972 YP_001639006.1 CDS Mext_1536 NC_010172.1 1715927 1717021 D KEGG: psa:PST_3212 UV damage repair endonuclease; UV damage repair endonuclease 1715927..1717021 Methylobacterium extorquens PA1 5831973 YP_001639007.1 CDS Mext_1537 NC_010172.1 1717142 1719868 D KEGG: rpd:RPD_0940 hypothetical protein; hypothetical protein 1717142..1719868 Methylobacterium extorquens PA1 5831309 YP_001639008.1 CDS Mext_1538 NC_010172.1 1719938 1720123 D PFAM: Hypoxia induced protein conserved region; KEGG: nwi:Nwi_0751 hypothetical protein; hypoxia induced protein region 1719938..1720123 Methylobacterium extorquens PA1 5831310 YP_001639009.1 CDS Mext_1539 NC_010172.1 1720155 1720652 R KEGG: syw:SYNW1403 hypothetical protein; hypothetical protein complement(1720155..1720652) Methylobacterium extorquens PA1 5831311 YP_001639010.1 CDS Mext_1540 NC_010172.1 1720887 1721549 D KEGG: pla:Plav_3239 hypothetical protein; hypothetical protein 1720887..1721549 Methylobacterium extorquens PA1 5831312 YP_001639011.1 CDS Mext_1541 NC_010172.1 1721649 1722242 D TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: oan:Oant_1007 ATP--cobalamin adenosyltransferase; ATP--cobalamin adenosyltransferase 1721649..1722242 Methylobacterium extorquens PA1 5833425 YP_001639012.1 CDS Mext_1542 NC_010172.1 1722405 1723154 D PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: xau:Xaut_2159 electron transfer flavoprotein alpha/beta-subunit; electron transfer flavoprotein alpha/beta-subunit 1722405..1723154 Methylobacterium extorquens PA1 5833426 YP_001639013.1 CDS Mext_1543 NC_010172.1 1723235 1724188 D PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: rpd:RPD_0931 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein alpha subunit 1723235..1724188 Methylobacterium extorquens PA1 5833427 YP_001639014.1 CDS Mext_1544 NC_010172.1 1724347 1725228 D PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: xau:Xaut_2157 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase 1724347..1725228 Methylobacterium extorquens PA1 5833428 YP_001639015.1 CDS Mext_1545 NC_010172.1 1725365 1725643 R hypothetical protein complement(1725365..1725643) Methylobacterium extorquens PA1 5831377 YP_001639016.1 CDS Mext_1546 NC_010172.1 1725835 1726845 R TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: xau:Xaut_1621 quinone oxidoreductase putative PIG3; PIG3 family NAD(P)H quinone oxidoreductase complement(1725835..1726845) Methylobacterium extorquens PA1 5831378 YP_001639017.1 CDS Mext_1547 NC_010172.1 1726990 1727640 R KEGG: bra:BRADO3518 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; uracil phosphoribosyltransferase complement(1726990..1727640) Methylobacterium extorquens PA1 5831379 YP_001639018.1 CDS Mext_1548 NC_010172.1 1727918 1728847 D PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_3446 ISHne3, transposase; transposase IS116/IS110/IS902 family protein 1727918..1728847 Methylobacterium extorquens PA1 5831380 YP_001639019.1 CDS Mext_1549 NC_010172.1 1728864 1730957 R KEGG: mes:Meso_2676 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX complement(1728864..1730957) Methylobacterium extorquens PA1 5832488 YP_001639020.1 CDS Mext_1550 NC_010172.1 1731040 1732464 R PFAM: glycosyl transferase family 20; KEGG: smd:Smed_5911 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Alpha,alpha-trehalose-phosphate synthase complement(1731040..1732464) Methylobacterium extorquens PA1 5832489 YP_001639021.1 CDS Mext_1551 NC_010172.1 1732995 1733474 D KEGG: rsh:Rsph17029_1046 hypothetical protein; hypothetical protein 1732995..1733474 Methylobacterium extorquens PA1 5832490 YP_001639022.1 CDS Mext_1552 NC_010172.1 1733471 1733893 D KEGG: mes:Meso_3142 protein of unknown function DUF1469; hypothetical protein 1733471..1733893 Methylobacterium extorquens PA1 5832491 YP_001639023.1 CDS Mext_1553 NC_010172.1 1733890 1734276 D hypothetical protein 1733890..1734276 Methylobacterium extorquens PA1 5832175 YP_001639024.1 CDS Mext_1554 NC_010172.1 1734341 1735177 D KEGG: rsq:Rsph17025_1892 hypothetical protein; hypothetical protein 1734341..1735177 Methylobacterium extorquens PA1 5832176 YP_001639025.1 CDS hisS NC_010172.1 1735257 1736768 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(1735257..1736768) Methylobacterium extorquens PA1 5832177 YP_001639026.1 CDS Mext_1556 NC_010172.1 1736852 1737289 R TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: bra:BRADO3024 secretion chaperone CsaA protein; export-related chaperone CsaA complement(1736852..1737289) Methylobacterium extorquens PA1 5832178 YP_001639027.1 CDS Mext_1557 NC_010172.1 1737307 1737825 R KEGG: pmy:Pmen_2170 hypothetical protein; hypothetical protein complement(1737307..1737825) Methylobacterium extorquens PA1 5831770 YP_001639028.1 CDS Mext_1558 NC_010172.1 1737892 1739208 R PFAM: major facilitator superfamily MFS_1; KEGG: rpb:RPB_4332 major facilitator superfamily MFS_1; major facilitator transporter complement(1737892..1739208) Methylobacterium extorquens PA1 5831771 YP_001639029.1 CDS Mext_1559 NC_010172.1 1739436 1739942 R TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; KEGG: rpa:RPA0302 putative protein-export protein SecB; protein-export protein SecB complement(1739436..1739942) Methylobacterium extorquens PA1 5831772 YP_001639030.1 CDS Mext_1560 NC_010172.1 1740404 1741123 D PFAM: import inner membrane translocase subunit Tim44; KEGG: xau:Xaut_2048 import inner membrane translocase subunit Tim44; import inner membrane translocase subunit Tim44 1740404..1741123 Methylobacterium extorquens PA1 5831773 YP_001639031.1 CDS Mext_1561 NC_010172.1 1741250 1742413 D PFAM: MltA domain protein; 3D domain protein; KEGG: xau:Xaut_2049 MltA domain protein; MltA domain-containing protein 1741250..1742413 Methylobacterium extorquens PA1 5833429 YP_001639032.1 CDS Mext_1562 NC_010172.1 1742410 1743180 D PFAM: Smr protein/MutS2; KEGG: bja:blr0644 hypothetical protein; Smr protein/MutS2 1742410..1743180 Methylobacterium extorquens PA1 5833430 YP_001639033.1 CDS rho NC_010172.1 1743257 1744777 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 1743257..1744777 Methylobacterium extorquens PA1 5833431 YP_001639034.1 CDS Mext_1564 NC_010172.1 1745051 1746784 D catalyzes the formation of acetate from pyruvate; pyruvate dehydrogenase 1745051..1746784 Methylobacterium extorquens PA1 5832777 YP_001639035.1 CDS Mext_1565 NC_010172.1 1746840 1747760 R hypothetical protein complement(1746840..1747760) Methylobacterium extorquens PA1 5832778 YP_001639036.1 CDS Mext_1566 NC_010172.1 1748067 1748813 R PFAM: Integral membrane protein TerC; KEGG: pfl:PFL_3996 membrane protein, TerC family; integral membrane protein TerC complement(1748067..1748813) Methylobacterium extorquens PA1 5832779 YP_001639037.1 CDS Mext_1567 NC_010172.1 1748830 1749759 R similar to YegS from E. coli; putative lipid kinase complement(1748830..1749759) Methylobacterium extorquens PA1 5832780 YP_001639038.1 CDS Mext_1568 NC_010172.1 1750350 1751165 D KEGG: zmo:ZMO0488 probable GTP binding protein; hypothetical protein 1750350..1751165 Methylobacterium extorquens PA1 5831592 YP_001639039.1 CDS Mext_1569 NC_010172.1 1751302 1752612 D KEGG: rru:Rru_A2520 penicillin-binding protein 1A; hypothetical protein 1751302..1752612 Methylobacterium extorquens PA1 5831593 YP_001639040.1 CDS Mext_1570 NC_010172.1 1752643 1753521 R PFAM: phosphoesterase PA-phosphatase related; KEGG: xcv:XCV4482 acid phosphatase; acid phosphatase complement(1752643..1753521) Methylobacterium extorquens PA1 5831594 YP_001639041.1 CDS Mext_1571 NC_010172.1 1753688 1754374 R KEGG: ana:alr3514 hypothetical protein; hypothetical protein complement(1753688..1754374) Methylobacterium extorquens PA1 5831712 YP_001639042.1 CDS Mext_1572 NC_010172.1 1754567 1754863 R SMART: helix-turn-helix domain protein; KEGG: cph:Cpha266_0786 putative DNA-binding protein; helix-turn-helix domain-containing protein complement(1754567..1754863) Methylobacterium extorquens PA1 5831713 YP_001639043.1 CDS Mext_1573 NC_010172.1 1754894 1755274 R KEGG: pla:Plav_1954 RelE-like cytotoxic translational repressor of toxin-antitoxin stability system; RelE-like cytotoxic translational repressor of toxin-antitoxin stability system complement(1754894..1755274) Methylobacterium extorquens PA1 5831714 YP_001639044.1 CDS Mext_1574 NC_010172.1 1755331 1756173 R KEGG: pla:Plav_0267 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; PFAM: transferase hexapeptide repeat containing protein; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase complement(1755331..1756173) Methylobacterium extorquens PA1 5831715 YP_001639045.1 CDS Mext_1575 NC_010172.1 1756336 1756803 R PFAM: cyclic nucleotide-binding; KEGG: rpd:RPD_0441 cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(1756336..1756803) Methylobacterium extorquens PA1 5831285 YP_001639046.1 CDS Mext_1576 NC_010172.1 1756990 1757697 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mes:Meso_3424 two component transcriptional regulator, winged helix family; response regulator receiver complement(1756990..1757697) Methylobacterium extorquens PA1 5831286 YP_001639047.1 CDS Mext_1577 NC_010172.1 1757967 1758560 D KEGG: xau:Xaut_1770 hypothetical protein; hypothetical protein 1757967..1758560 Methylobacterium extorquens PA1 5831287 YP_001639048.1 CDS Mext_1578 NC_010172.1 1758600 1759343 R PFAM: alanine racemase domain protein; KEGG: xau:Xaut_0278 alanine racemase domain protein; alanine racemase domain-containing protein complement(1758600..1759343) Methylobacterium extorquens PA1 5833771 YP_001639049.1 CDS Mext_1579 NC_010172.1 1759572 1762277 D TIGRFAM: leucyl-tRNA synthetase; KEGG: rpc:RPC_0284 leucyl-tRNA synthetase; leucyl-tRNA synthetase 1759572..1762277 Methylobacterium extorquens PA1 5833772 YP_001639050.1 CDS trmE NC_010172.1 1762370 1763704 D in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 1762370..1763704 Methylobacterium extorquens PA1 5833773 YP_001639051.1 CDS Mext_1581 NC_010172.1 1763718 1764740 R TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; KEGG: mba:Mbar_A0404 hypothetical protein; PAS sensor protein complement(1763718..1764740) Methylobacterium extorquens PA1 5833774 YP_001639052.1 CDS Mext_1582 NC_010172.1 1765093 1765374 D hypothetical protein 1765093..1765374 Methylobacterium extorquens PA1 5831266 YP_001639053.1 CDS Mext_1583 NC_010172.1 1765548 1767422 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 1765548..1767422 Methylobacterium extorquens PA1 5831267 YP_001639054.1 CDS Mext_1584 NC_010172.1 1767457 1768092 D TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: xau:Xaut_1835 glucose inhibited division protein; methyltransferase GidB 1767457..1768092 Methylobacterium extorquens PA1 5831268 YP_001639055.1 CDS Mext_1585 NC_010172.1 1768089 1768949 D PFAM: Cobyrinic acid ac-diamide synthase; KEGG: xau:Xaut_1836 cobyrinic acid ac-diamide synthase; cobyrinic acid ac-diamide synthase 1768089..1768949 Methylobacterium extorquens PA1 5831813 YP_001639056.1 CDS Mext_1586 NC_010172.1 1768977 1769879 D TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: mlo:mll4477 chromosome partitioning protein, ParB; parB-like partition protein 1768977..1769879 Methylobacterium extorquens PA1 5831814 YP_001639057.1 CDS holA NC_010172.1 1769943 1770974 R required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(1769943..1770974) Methylobacterium extorquens PA1 5831815 YP_001639058.1 CDS Mext_1588 NC_010172.1 1770985 1771539 R KEGG: rpb:RPB_0386 hypothetical protein; hypothetical protein complement(1770985..1771539) Methylobacterium extorquens PA1 5831816 YP_001639059.1 CDS Mext_1589 NC_010172.1 1771937 1772281 D hypothetical protein 1771937..1772281 Methylobacterium extorquens PA1 5835818 YP_001639060.1 CDS Mext_1590 NC_010172.1 1772416 1773516 D KEGG: xau:Xaut_0016 hypothetical protein; hypothetical protein 1772416..1773516 Methylobacterium extorquens PA1 5835819 YP_001639061.1 CDS Mext_1591 NC_010172.1 1773523 1774467 R KEGG: swi:Swit_4855 protein of unknown function DUF23; hypothetical protein complement(1773523..1774467) Methylobacterium extorquens PA1 5835820 YP_001639062.1 CDS Mext_1592 NC_010172.1 1774485 1775423 R PFAM: Prephenate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: xau:Xaut_0393 arogenate dehydrogenase; prephenate dehydrogenase complement(1774485..1775423) Methylobacterium extorquens PA1 5835007 YP_001639063.1 CDS Mext_1593 NC_010172.1 1775420 1776538 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(1775420..1776538) Methylobacterium extorquens PA1 5835008 YP_001639064.1 CDS Mext_1594 NC_010172.1 1776653 1777150 R hypothetical protein complement(1776653..1777150) Methylobacterium extorquens PA1 5835009 YP_001639065.1 CDS Mext_1595 NC_010172.1 1777297 1779531 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bja:bll4920 ferrichrome iron receptor; TonB-dependent siderophore receptor complement(1777297..1779531) Methylobacterium extorquens PA1 5835010 YP_001639066.1 CDS Mext_1596 NC_010172.1 1779803 1781809 R PFAM: K potassium transporter; KEGG: bbt:BBta_3513 low affinity potassium transporter (Kup family); K potassium transporter complement(1779803..1781809) Methylobacterium extorquens PA1 5834004 YP_001639067.1 CDS ispG NC_010172.1 1782128 1783456 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(1782128..1783456) Methylobacterium extorquens PA1 5834005 YP_001639068.1 CDS Mext_1598 NC_010172.1 1783788 1785032 D PFAM: Patatin; KEGG: xau:Xaut_1886 patatin; patatin 1783788..1785032 Methylobacterium extorquens PA1 5834006 YP_001639069.1 CDS Mext_1599 NC_010172.1 1785124 1786173 D PFAM: regulatory protein ArsR; UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: xau:Xaut_2830 methyltransferase type 11; type 11 methyltransferase 1785124..1786173 Methylobacterium extorquens PA1 5834651 YP_001639070.1 CDS Mext_1600 NC_010172.1 1786273 1787205 D KEGG: xau:Xaut_2831 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 1786273..1787205 Methylobacterium extorquens PA1 5834652 YP_001639071.1 CDS metH NC_010172.1 1787405 1791157 D one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 1787405..1791157 Methylobacterium extorquens PA1 5834653 YP_001639072.1 CDS Mext_1602 NC_010172.1 1791301 1791516 D hypothetical protein 1791301..1791516 Methylobacterium extorquens PA1 5834654 YP_001639073.1 CDS Mext_1603 NC_010172.1 1791527 1792729 R KEGG: bra:BRADO4228 conserved hypothetical protein; putative acyl-CoA N-acyltransferase related protein; putative acyl-CoA N-acyltransferase-like protein complement(1791527..1792729) Methylobacterium extorquens PA1 5833740 YP_001639074.1 CDS Mext_1604 NC_010172.1 1792936 1793988 D PFAM: polysaccharide deacetylase; KEGG: bbt:BBta_0752 putative polysaccharide deacetylase; polysaccharide deacetylase 1792936..1793988 Methylobacterium extorquens PA1 5833741 YP_001639075.1 CDS Mext_1605 NC_010172.1 1794001 1794438 R hypothetical protein complement(1794001..1794438) Methylobacterium extorquens PA1 5833742 YP_001639076.1 CDS Mext_1606 NC_010172.1 1794574 1794879 R KEGG: rpa:RPA2757 hypothetical protein; hypothetical protein complement(1794574..1794879) Methylobacterium extorquens PA1 5835750 YP_001639077.1 CDS Mext_1607 NC_010172.1 1795154 1796302 D PFAM: cytochrome oxidase assembly; KEGG: xau:Xaut_4338 cytochrome oxidase assembly; cytochrome oxidase assembly 1795154..1796302 Methylobacterium extorquens PA1 5835751 YP_001639078.1 CDS Mext_1608 NC_010172.1 1796583 1797263 D PFAM: Hly-III family protein; KEGG: rpa:RPA1585 putative hemmolysin III, HlyIII family; Hly-III family protein 1796583..1797263 Methylobacterium extorquens PA1 5835752 YP_001639079.1 CDS Mext_1609 NC_010172.1 1797465 1797881 D hypothetical protein 1797465..1797881 Methylobacterium extorquens PA1 5835753 YP_001639080.1 CDS Mext_1610 NC_010172.1 1798088 1799980 D required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 1798088..1799980 Methylobacterium extorquens PA1 5834179 YP_001639081.1 CDS Mext_1611 NC_010172.1 1800197 1800544 D hypothetical protein 1800197..1800544 Methylobacterium extorquens PA1 5834180 YP_001639082.1 CDS Mext_1612 NC_010172.1 1800718 1801092 R PFAM: flagellar FlaF family protein; KEGG: nwi:Nwi_1106 putative flagellar protein FlaF; flagellar FlaF family protein complement(1800718..1801092) Methylobacterium extorquens PA1 5833963 YP_001639083.1 CDS Mext_1613 NC_010172.1 1801270 1801509 D hypothetical protein 1801270..1801509 Methylobacterium extorquens PA1 5833964 YP_001639084.1 CDS Mext_1614 NC_010172.1 1801958 1802284 R hypothetical protein complement(1801958..1802284) Methylobacterium extorquens PA1 5833965 YP_001639085.1 CDS Mext_1615 NC_010172.1 1802520 1803089 R PFAM: metallophosphoesterase; KEGG: sme:SMb20398 hypothetical protein; metallophosphoesterase complement(1802520..1803089) Methylobacterium extorquens PA1 5833966 YP_001639086.1 CDS Mext_1616 NC_010172.1 1803147 1804283 R TIGRFAM: TonB family protein; KEGG: rpe:RPE_0962 TonB family protein; TonB family protein complement(1803147..1804283) Methylobacterium extorquens PA1 5834414 YP_001639087.1 CDS Mext_1617 NC_010172.1 1804288 1804749 R TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rru:Rru_A2154 biopolymer transport protein ExbD/TolR; protein TolR complement(1804288..1804749) Methylobacterium extorquens PA1 5834415 YP_001639088.1 CDS Mext_1618 NC_010172.1 1804834 1805535 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: rru:Rru_A2155 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(1804834..1805535) Methylobacterium extorquens PA1 5834416 YP_001639089.1 CDS Mext_1619 NC_010172.1 1805607 1806089 R KEGG: mlo:mlr1156 hypothetical protein; hypothetical protein complement(1805607..1806089) Methylobacterium extorquens PA1 5834244 YP_001639090.1 CDS Mext_1620 NC_010172.1 1806658 1807089 D PFAM: heat shock protein Hsp20; KEGG: rpa:RPA0054 putative small heat shock protein; heat shock protein Hsp20 1806658..1807089 Methylobacterium extorquens PA1 5834245 YP_001639091.1 CDS Mext_1621 NC_010172.1 1807263 1807544 D PFAM: protein of unknown function DUF1150; KEGG: xau:Xaut_2033 protein of unknown function DUF1150; hypothetical protein 1807263..1807544 Methylobacterium extorquens PA1 5834246 YP_001639092.1 CDS Mext_1622 NC_010172.1 1807576 1808391 R KEGG: rpb:RPB_0067 hypothetical protein; hypothetical protein complement(1807576..1808391) Methylobacterium extorquens PA1 5834247 YP_001639093.1 CDS Mext_1623 NC_010172.1 1808487 1809716 D PFAM: glycosyl transferase group 1; KEGG: pla:Plav_0205 glycosyl transferase group 1; group 1 glycosyl transferase 1808487..1809716 Methylobacterium extorquens PA1 5834894 YP_001639094.1 CDS infC NC_010172.1 1809884 1810414 D IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 1809884..1810414 Methylobacterium extorquens PA1 5834895 YP_001639095.1 CDS Mext_1625 NC_010172.1 1810605 1812941 R PFAM: Amylo-alpha-16-glucosidase; KEGG: bra:BRADO2429 hypothetical protein; amylo-alpha-16-glucosidase complement(1810605..1812941) Methylobacterium extorquens PA1 5834896 YP_001639096.1 CDS Mext_1626 NC_010172.1 1813100 1814233 R PFAM: glycosyl transferase group 1; KEGG: mes:Meso_3692 glycosyl transferase, group 1; group 1 glycosyl transferase complement(1813100..1814233) Methylobacterium extorquens PA1 5831673 YP_001639097.1 CDS rpmI NC_010172.1 1814688 1814891 D PFAM: ribosomal protein L35; KEGG: bra:BRADO0137 50S ribosomal protein L35; 50S ribosomal protein L35 1814688..1814891 Methylobacterium extorquens PA1 5831674 YP_001639098.1 CDS rplT NC_010172.1 1814944 1815309 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1814944..1815309 Methylobacterium extorquens PA1 5831675 YP_001639099.1 CDS pheS NC_010172.1 1815493 1816572 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1815493..1816572 Methylobacterium extorquens PA1 5831676 YP_001639100.1 CDS Mext_1630 NC_010172.1 1816637 1819060 D KEGG: bbt:BBta_0212 phenylalanyl-tRNA synthetase beta chain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta 1816637..1819060 Methylobacterium extorquens PA1 5831002 YP_001639101.1 CDS Mext_1631 NC_010172.1 1819086 1819961 D PFAM: SEC-C motif domain protein; KEGG: sus:Acid_0028 protein of unknown function DUF1186; SecC motif-containing protein 1819086..1819961 Methylobacterium extorquens PA1 5831003 YP_001639102.1 CDS Mext_1632 NC_010172.1 1819909 1820736 R PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: bja:blr0765 molybdopterin biosynthesis protein; UBA/THIF-type NAD/FAD binding protein complement(1819909..1820736) Methylobacterium extorquens PA1 5831004 YP_001639103.1 CDS Mext_1633 NC_010172.1 1820957 1822168 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 1820957..1822168 Methylobacterium extorquens PA1 5835115 YP_001639104.1 CDS truA NC_010172.1 1822223 1822975 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(1822223..1822975) Methylobacterium extorquens PA1 5835116 YP_001639105.1 CDS Mext_1635 NC_010172.1 1822989 1823918 R TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: rpe:RPE_0655 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(1822989..1823918) Methylobacterium extorquens PA1 5835117 YP_001639106.1 CDS Mext_1636 NC_010172.1 1823929 1824444 R KEGG: bra:BRADO0770 peptide deformylase (PDF) (polypeptide deformylase); TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase complement(1823929..1824444) Methylobacterium extorquens PA1 5835118 YP_001639107.1 CDS Mext_1637 NC_010172.1 1824722 1826008 R KEGG: cte:CT0439 hypothetical protein; hypothetical protein complement(1824722..1826008) Methylobacterium extorquens PA1 5834067 YP_001639108.1 CDS recR NC_010172.1 1826123 1826728 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(1826123..1826728) Methylobacterium extorquens PA1 5834068 YP_001639109.1 CDS Mext_1639 NC_010172.1 1827056 1828675 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 1827056..1828675 Methylobacterium extorquens PA1 5834069 YP_001639110.1 CDS Mext_1640 NC_010172.1 1828721 1829998 R TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: xau:Xaut_0398 radical SAM enzyme, Cfr family; radical SAM protein complement(1828721..1829998) Methylobacterium extorquens PA1 5832581 YP_001639111.1 CDS Mext_1641 NC_010172.1 1830117 1831931 R PFAM: shikimate kinase; 3-dehydroquinate synthase; KEGG: bra:BRADO0609 bifunctional: shikimate kinase (N-terminal); dehydroquinate synthase (C-terminal); shikimate kinase., 3-dehydroquinate synthase complement(1830117..1831931) Methylobacterium extorquens PA1 5832582 YP_001639112.1 CDS Mext_1642 NC_010172.1 1832108 1832839 D PFAM: regulatory protein TetR; KEGG: bbt:BBta_5351 putative transcriptional regulatory protein, TetR family; regulatory protein TetR 1832108..1832839 Methylobacterium extorquens PA1 5832583 YP_001639113.1 CDS Mext_1643 NC_010172.1 1833190 1834152 D TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase; KEGG: bme:BMEI0137 malate dehydrogenase; malate dehydrogenase 1833190..1834152 Methylobacterium extorquens PA1 5832584 YP_001639114.1 CDS Mext_1644 NC_010172.1 1834230 1835426 D KEGG: rpe:RPE_0299 succinyl-CoA synthetase, beta subunit; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; succinyl-CoA synthetase subunit beta 1834230..1835426 Methylobacterium extorquens PA1 5833000 YP_001639115.1 CDS Mext_1645 NC_010172.1 1835435 1836322 D TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: bbt:BBta_0394 succinyl-CoA synthetase, alpha subunit, NAD(P)-binding; succinyl-CoA synthetase subunit alpha 1835435..1836322 Methylobacterium extorquens PA1 5833001 YP_001639116.1 CDS sucA NC_010172.1 1836547 1839537 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1836547..1839537 Methylobacterium extorquens PA1 5833002 YP_001639117.1 CDS Mext_1647 NC_010172.1 1839621 1840949 D TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: xau:Xaut_0158 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 1839621..1840949 Methylobacterium extorquens PA1 5832617 YP_001639118.1 CDS Mext_1648 NC_010172.1 1841237 1842640 D Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1841237..1842640 Methylobacterium extorquens PA1 5832618 YP_001639119.1 CDS Mext_1649 NC_010172.1 1842840 1844465 D KEGG: bra:BRADO6651 putative sensor histidine kinase with PAS/PAC and response regulator receiver domains; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; histidine kinase 1842840..1844465 Methylobacterium extorquens PA1 5832619 YP_001639120.1 CDS Mext_1650 NC_010172.1 1844525 1845157 D KEGG: bbr:BB0701 hypothetical protein; hypothetical protein 1844525..1845157 Methylobacterium extorquens PA1 5832620 YP_001639121.1 CDS Mext_1651 NC_010172.1 1845139 1845768 R PFAM: Sarcosine oxidase gamma subunit; KEGG: xau:Xaut_4703 sarcosine oxidase gamma subunit; sarcosine oxidase subunit gamma complement(1845139..1845768) Methylobacterium extorquens PA1 5833889 YP_001639122.1 CDS Mext_1652 NC_010172.1 1845761 1848790 R TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: bra:BRADO5880 sarcosine oxidase, alpha subunit; sarcosine oxidase subunit alpha complement(1845761..1848790) Methylobacterium extorquens PA1 5833890 YP_001639123.1 CDS Mext_1653 NC_010172.1 1848787 1849074 R PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: xau:Xaut_4701 sarcosine oxidase delta subunit heterotetrameric; sarcosine oxidase subunit delta heterotetrameric complement(1848787..1849074) Methylobacterium extorquens PA1 5833891 YP_001639124.1 CDS Mext_1654 NC_010172.1 1849256 1850506 R TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: bbt:BBta_1949 sarcosine oxidase, beta subunit; sarcosine oxidase subunit beta complement(1849256..1850506) Methylobacterium extorquens PA1 5832812 YP_001639125.1 CDS Mext_1655 NC_010172.1 1850707 1851705 D PFAM: ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bra:BRADO5877 putative bifunctional protein with a transcriptional regulator AraC/XylS family domain and a class I glutamine amidotransferase-like domain; ThiJ/PfpI domain-containing protein 1850707..1851705 Methylobacterium extorquens PA1 5832813 YP_001639126.1 CDS Mext_1656 NC_010172.1 1851880 1852815 D PFAM: glutamine amidotransferase class-II; KEGG: bbt:BBta_1942 putative glutamine amidotransferase GATase, classII; glutamine amidotransferase 1851880..1852815 Methylobacterium extorquens PA1 5832814 YP_001639127.1 CDS Mext_1657 NC_010172.1 1852815 1853504 D PFAM: glutamate synthase alpha subunit domain protein; KEGG: gbe:GbCGDNIH1_2112 glutamate synthase family protein; glutamate synthase subunit alpha 1852815..1853504 Methylobacterium extorquens PA1 5832815 YP_001639128.1 CDS Mext_1658 NC_010172.1 1853504 1854847 D PFAM: dihydroorotate dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: azo:azo3013 glutamate synthase, large subunit; ferredoxin-dependent glutamate synthase 1853504..1854847 Methylobacterium extorquens PA1 5832106 YP_001639129.1 CDS Mext_1659 NC_010172.1 1854937 1856235 D TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region; KEGG: bbt:BBta_1945 glutamine synthetase I; glutamine synthetase 1854937..1856235 Methylobacterium extorquens PA1 5832107 YP_001639130.1 CDS Mext_1660 NC_010172.1 1856410 1856919 D KEGG: rpd:RPD_0711 hypothetical protein; hypothetical protein 1856410..1856919 Methylobacterium extorquens PA1 5832108 YP_001639131.1 CDS Mext_1661 NC_010172.1 1857361 1857606 R KEGG: smd:Smed_6258 transposase and inactivated derivatives-like protein; transposase and inactivated derivatives-like protein complement(1857361..1857606) Methylobacterium extorquens PA1 5831749 YP_001639132.1 CDS Mext_1662 NC_010172.1 1858023 1868786 D PFAM: Hemolysin-type calcium-binding region; Animal haem peroxidase; KEGG: rpd:RPD_1560 animal haem peroxidase; heme peroxidase 1858023..1868786 Methylobacterium extorquens PA1 5831750 YP_001639133.1 CDS Mext_1663 NC_010172.1 1868847 1870613 D KEGG: mes:Meso_0792 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 1868847..1870613 Methylobacterium extorquens PA1 5831693 YP_001639134.1 CDS Mext_1664 NC_010172.1 1870610 1872835 D PFAM: Hemolysin-type calcium-binding region; KEGG: mes:Meso_0793 hemolysin-type calcium-binding region; hemolysin-type calcium-binding protein 1870610..1872835 Methylobacterium extorquens PA1 5831694 YP_001639135.1 CDS Mext_1665 NC_010172.1 1872857 1874203 D TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: mes:Meso_0794 type I secretion membrane fusion protein, HlyD family; HlyD family type I secretion membrane fusion protein 1872857..1874203 Methylobacterium extorquens PA1 5831695 YP_001639136.1 CDS Mext_1666 NC_010172.1 1874447 1874914 D KEGG: rsp:RSP_4193 hypothetical protein; hypothetical protein 1874447..1874914 Methylobacterium extorquens PA1 5830968 YP_001639137.1 CDS Mext_1667 NC_010172.1 1874931 1876085 D PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rpa:RPA1490 bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB4; ATPase domain-containing protein 1874931..1876085 Methylobacterium extorquens PA1 5830969 YP_001639138.1 CDS Mext_1668 NC_010172.1 1876078 1876746 D PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rpd:RPD_3789 response regulator receiver; response regulator receiver 1876078..1876746 Methylobacterium extorquens PA1 5830970 YP_001639139.1 CDS Mext_1669 NC_010172.1 1877109 1877984 R KEGG: bur:Bcep18194_C6578 esterase/lipase-like protein; esterase/lipase-like protein complement(1877109..1877984) Methylobacterium extorquens PA1 5830971 YP_001639140.1 CDS Mext_1670 NC_010172.1 1878084 1878893 R PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pol:Bpro_3929 UbiE/COQ5 methyltransferase; type 11 methyltransferase complement(1878084..1878893) Methylobacterium extorquens PA1 5832218 YP_001639141.1 CDS Mext_1671 NC_010172.1 1879549 1885362 D PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ava:Ava_4696 GAF sensor hybrid histidine kinase; histidine kinase 1879549..1885362 Methylobacterium extorquens PA1 5832219 YP_001639142.1 CDS Mext_1672 NC_010172.1 1885359 1887446 D KEGG: mlo:mll2384 probable sensor/response regulator hybrid protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein; PAS sensor protein 1885359..1887446 Methylobacterium extorquens PA1 5832220 YP_001639143.1 CDS Mext_1673 NC_010172.1 1887717 1888589 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; TrkA-N domain protein; NmrA family protein; Male sterility domain; KEGG: rle:RL1205 hypothetical protein; NmrA family protein complement(1887717..1888589) Methylobacterium extorquens PA1 5832263 YP_001639144.1 CDS Mext_1674 NC_010172.1 1888693 1889586 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL1204 putative LysR family transcriptional regulator; LysR substrate-binding protein 1888693..1889586 Methylobacterium extorquens PA1 5832264 YP_001639145.1 CDS Mext_1675 NC_010172.1 1889710 1890756 R PFAM: luciferase family protein; KEGG: rle:RL2299 putative bacterial luciferase family oxidoreductase; luciferase family protein complement(1889710..1890756) Methylobacterium extorquens PA1 5832265 YP_001639146.1 CDS Mext_1676 NC_010172.1 1890993 1891472 R PFAM: DoxX family protein; KEGG: jan:Jann_0759 hypothetical protein; DoxX family protein complement(1890993..1891472) Methylobacterium extorquens PA1 5832266 YP_001639147.1 CDS Mext_1677 NC_010172.1 1891517 1892407 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_4296 transcriptional regulator, LysR family; LysR substrate-binding protein 1891517..1892407 Methylobacterium extorquens PA1 5833073 YP_001639148.1 CDS Mext_1678 NC_010172.1 1892754 1893407 R PFAM: isochorismatase hydrolase; KEGG: rle:RL0306 putative isochorismatase family protein; isochorismatase hydrolase complement(1892754..1893407) Methylobacterium extorquens PA1 5833074 YP_001639149.1 CDS Mext_1679 NC_010172.1 1893510 1894466 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mgi:Mflv_2124 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase complement(1893510..1894466) Methylobacterium extorquens PA1 5833075 YP_001639150.1 CDS Mext_1680 NC_010172.1 1894562 1895500 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B2516 transcriptional regulator, LysR-family; LysR substrate-binding protein 1894562..1895500 Methylobacterium extorquens PA1 5831288 YP_001639151.1 CDS Mext_1681 NC_010172.1 1896086 1896460 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rle:RL1211 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(1896086..1896460) Methylobacterium extorquens PA1 5831289 YP_001639152.1 CDS Mext_1682 NC_010172.1 1897168 1897962 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpd:RPD_4246 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 1897168..1897962 Methylobacterium extorquens PA1 5831290 YP_001639153.1 CDS Mext_1683 NC_010172.1 1898025 1898903 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_2757 transcriptional regulator, LysR family; LysR substrate-binding protein 1898025..1898903 Methylobacterium extorquens PA1 5831291 YP_001639154.1 CDS Mext_1684 NC_010172.1 1899041 1899283 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bxe:Bxe_A2683 hypothetical protein; antibiotic biosynthesis monooxygenase 1899041..1899283 Methylobacterium extorquens PA1 5830939 YP_001639155.1 CDS Mext_1685 NC_010172.1 1899356 1899781 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: acr:Acry_2974 cupin 2, conserved barrel domain protein; cupin complement(1899356..1899781) Methylobacterium extorquens PA1 5830940 YP_001639156.1 CDS Mext_1686 NC_010172.1 1899791 1900099 R KEGG: ang:An12g09540 hypothetical protein Pfam: MRJP SGL; hypothetical protein complement(1899791..1900099) Methylobacterium extorquens PA1 5830941 YP_001639157.1 CDS Mext_1687 NC_010172.1 1900239 1901255 R KEGG: mlo:mlr7750 alginate lyase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; zinc-binding alcohol dehydrogenase family protein complement(1900239..1901255) Methylobacterium extorquens PA1 5831895 YP_001639158.1 CDS Mext_1688 NC_010172.1 1901283 1902143 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rru:Rru_A0215 protein of unknown function DUF6, transmembrane; hypothetical protein complement(1901283..1902143) Methylobacterium extorquens PA1 5831896 YP_001639159.1 CDS Mext_1689 NC_010172.1 1902857 1904581 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: xom:XOO_1775 sensor histidine kinase; diguanylate cyclase 1902857..1904581 Methylobacterium extorquens PA1 5831897 YP_001639160.1 CDS Mext_1690 NC_010172.1 1904889 1909787 R TIGRFAM: autotransporter-associated beta strand repeat protein; PFAM: Amidase; KEGG: mxa:MXAN_3566 amidase; beta strand repeat-containing protein complement(1904889..1909787) Methylobacterium extorquens PA1 5831898 YP_001639161.1 CDS Mext_1691 NC_010172.1 1910433 1911833 D TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: xau:Xaut_3292 uracil-xanthine permease; xanthine permease 1910433..1911833 Methylobacterium extorquens PA1 5832348 YP_001639162.1 CDS Mext_1692 NC_010172.1 1911960 1912367 R KEGG: xau:Xaut_4655 hypothetical protein; hypothetical protein complement(1911960..1912367) Methylobacterium extorquens PA1 5832349 YP_001639163.1 CDS Mext_1693 NC_010172.1 1912364 1913779 R catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase complement(1912364..1913779) Methylobacterium extorquens PA1 5832350 YP_001639164.1 CDS Mext_1694 NC_010172.1 1913776 1913979 R hypothetical protein complement(1913776..1913979) Methylobacterium extorquens PA1 5832949 YP_001639165.1 CDS Mext_1695 NC_010172.1 1914077 1914757 R PFAM: isochorismatase hydrolase; KEGG: rpb:RPB_1017 isochorismatase hydrolase; isochorismatase hydrolase complement(1914077..1914757) Methylobacterium extorquens PA1 5832950 YP_001639166.1 CDS Mext_1696 NC_010172.1 1915263 1916258 D KEGG: bra:BRADO1748 conserved hypothetical protein; putative signal peptide; putative signal peptide 1915263..1916258 Methylobacterium extorquens PA1 5832951 YP_001639167.1 CDS Mext_1697 NC_010172.1 1916284 1917648 D catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase 1916284..1917648 Methylobacterium extorquens PA1 5832952 YP_001639168.1 CDS Mext_1698 NC_010172.1 1917645 1919252 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO1747 putative ABC transporter (ATP-binding protein); ABC transporter-like protein 1917645..1919252 Methylobacterium extorquens PA1 5831015 YP_001639169.1 CDS Mext_1699 NC_010172.1 1919315 1920406 D PFAM: inner-membrane translocator; KEGG: rpa:RPA4576 putative permease protein of sugar ABC transporter; inner-membrane translocator 1919315..1920406 Methylobacterium extorquens PA1 5831016 YP_001639170.1 CDS Mext_1700 NC_010172.1 1920403 1921329 D PFAM: inner-membrane translocator; KEGG: bbt:BBta_2058 putative ABC transporter (permease protein); inner-membrane translocator 1920403..1921329 Methylobacterium extorquens PA1 5831017 YP_001639171.1 CDS Mext_1701 NC_010172.1 1921495 1922634 D PFAM: basic membrane lipoprotein; KEGG: mlo:mlr7061 hypothetical protein; basic membrane lipoprotein 1921495..1922634 Methylobacterium extorquens PA1 5832638 YP_001639172.1 CDS Mext_1702 NC_010172.1 1922808 1923965 D PFAM: inner-membrane translocator; KEGG: mlo:mlr7062 sugar ABC transporter, permease protein; inner-membrane translocator 1922808..1923965 Methylobacterium extorquens PA1 5832639 YP_001639173.1 CDS Mext_1703 NC_010172.1 1923988 1924908 D PFAM: inner-membrane translocator; KEGG: mlo:mlr7063 sugar ABC transporter, permease protein; inner-membrane translocator 1923988..1924908 Methylobacterium extorquens PA1 5832640 YP_001639174.1 CDS amiF NC_010172.1 1924918 1925946 D formamide amidohydrolase; catalyzes the hydrolysis of formamide to formate; formamidase 1924918..1925946 Methylobacterium extorquens PA1 5832641 YP_001639175.1 CDS Mext_1705 NC_010172.1 1925943 1926662 D PFAM: isochorismatase hydrolase; KEGG: bja:blr6151 hypothetical isochorismatase family protein; isochorismatase hydrolase 1925943..1926662 Methylobacterium extorquens PA1 5831029 YP_001639176.1 CDS Mext_1706 NC_010172.1 1926670 1928232 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PE00111 probable sugar ABC transporter, ATP-binding protein; ABC transporter-like protein 1926670..1928232 Methylobacterium extorquens PA1 5831030 YP_001639177.1 CDS Mext_1707 NC_010172.1 1928573 1929385 R PFAM: protein of unknown function DUF81; KEGG: sdn:Sden_2780 protein of unknown function DUF81; hypothetical protein complement(1928573..1929385) Methylobacterium extorquens PA1 5831031 YP_001639178.1 CDS Mext_1708 NC_010172.1 1929515 1930795 D PFAM: basic membrane lipoprotein; KEGG: bbt:BBta_2057 putative ABC transporter (substrate-binding protein); basic membrane lipoprotein 1929515..1930795 Methylobacterium extorquens PA1 5833656 YP_001639179.1 CDS Mext_1709 NC_010172.1 1930872 1931153 R hypothetical protein complement(1930872..1931153) Methylobacterium extorquens PA1 5833657 YP_001639180.1 CDS Mext_1710 NC_010172.1 1931224 1931430 R hypothetical protein complement(1931224..1931430) Methylobacterium extorquens PA1 5833658 YP_001639181.1 CDS Mext_1711 NC_010172.1 1931519 1933165 R PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: cya:CYA_1044 X-Pro dipeptidyl-peptidase (S15 family); peptidase S15 complement(1931519..1933165) Methylobacterium extorquens PA1 5833659 YP_001639182.1 CDS Mext_1712 NC_010172.1 1933155 1933976 R PFAM: Creatininase; KEGG: bbt:BBta_1271 hypothetical protein; creatininase complement(1933155..1933976) Methylobacterium extorquens PA1 5831719 YP_001639183.1 CDS Mext_1713 NC_010172.1 1933973 1935532 R PFAM: AMP-dependent synthetase and ligase; KEGG: mta:Moth_0503 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(1933973..1935532) Methylobacterium extorquens PA1 5831720 YP_001639184.1 CDS Mext_1714 NC_010172.1 1935573 1936160 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bbt:BBta_1267 putative NAD(P)H dehydrogenase (quinone) protein; NAD(P)H dehydrogenase (quinone) complement(1935573..1936160) Methylobacterium extorquens PA1 5831721 YP_001639185.1 CDS Mext_1715 NC_010172.1 1936157 1937545 R PFAM: FAD linked oxidase domain protein; KEGG: bbt:BBta_1268 hypothetical protein; FAD linked oxidase domain-containing protein complement(1936157..1937545) Methylobacterium extorquens PA1 5831880 YP_001639186.1 CDS Mext_1716 NC_010172.1 1937547 1938518 R PFAM: 2OG-Fe(II) oxygenase; KEGG: cya:CYA_0699 oxidoreductase, 2OG-Fe(II) oxygenase family; 2OG-Fe(II) oxygenase complement(1937547..1938518) Methylobacterium extorquens PA1 5831881 YP_001639187.1 CDS Mext_1717 NC_010172.1 1938531 1939499 R PFAM: NMT1/THI5 like domain protein; KEGG: ter:Tery_0706 putative secreted protein; NMT1/THI5-like domain-containing protein complement(1938531..1939499) Methylobacterium extorquens PA1 5831882 YP_001639188.1 CDS Mext_1718 NC_010172.1 1939499 1940572 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: bbt:BBta_1261 hypothetical protein; Rieske (2Fe-2S) domain-containing protein complement(1939499..1940572) Methylobacterium extorquens PA1 5831883 YP_001639189.1 CDS Mext_1719 NC_010172.1 1940639 1941433 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_1263 putative ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein complement(1940639..1941433) Methylobacterium extorquens PA1 5833737 YP_001639190.1 CDS Mext_1720 NC_010172.1 1941430 1942344 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_1264 putative ABC transporter, ATP-binding protein; ABC transporter-like protein complement(1941430..1942344) Methylobacterium extorquens PA1 5833738 YP_001639191.1 CDS Mext_1721 NC_010172.1 1942353 1943339 R PFAM: NMT1/THI5 like domain protein; KEGG: bxe:Bxe_A2012 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein; NMT1/THI5-like domain-containing protein complement(1942353..1943339) Methylobacterium extorquens PA1 5833739 YP_001639192.1 CDS Mext_1722 NC_010172.1 1943666 1944571 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:pRL110610 putative LysR family transcriptional regulator; LysR substrate-binding protein 1943666..1944571 Methylobacterium extorquens PA1 5832849 YP_001639193.1 CDS Mext_1723 NC_010172.1 1944650 1946029 D Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase 1944650..1946029 Methylobacterium extorquens PA1 5832850 YP_001639194.1 CDS Mext_1724 NC_010172.1 1946324 1946572 D hypothetical protein 1946324..1946572 Methylobacterium extorquens PA1 5832851 YP_001639195.1 CDS Mext_1725 NC_010172.1 1946841 1947071 D hypothetical protein 1946841..1947071 Methylobacterium extorquens PA1 5832852 YP_001639196.1 CDS Mext_1726 NC_010172.1 1947252 1948175 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_2371 transcriptional regulator, LysR family; LysR substrate-binding protein 1947252..1948175 Methylobacterium extorquens PA1 5832499 YP_001639197.1 CDS Mext_1727 NC_010172.1 1948204 1949562 R TIGRFAM: guanine deaminase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: gox:GOX0898 guanine deaminase; guanine deaminase complement(1948204..1949562) Methylobacterium extorquens PA1 5832500 YP_001639198.1 CDS Mext_1728 NC_010172.1 1949559 1952339 R PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bbt:BBta_2048 putative xanthine dehydrogenase family protein; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase complement(1949559..1952339) Methylobacterium extorquens PA1 5832501 YP_001639199.1 CDS Mext_1729 NC_010172.1 1952336 1953151 R PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bra:BRADO1737 conserved hypothetical protein; putative oxidoreductase (FAD binding); FAD-binding molybdopterin dehydrogenase complement(1952336..1953151) Methylobacterium extorquens PA1 5832232 YP_001639200.1 CDS Mext_1730 NC_010172.1 1953464 1954453 R PFAM: NMT1/THI5 like domain protein; KEGG: bbt:BBta_6030 putative ABC transporter, substrate binding protein; NMT1/THI5-like domain-containing protein complement(1953464..1954453) Methylobacterium extorquens PA1 5832233 YP_001639201.1 CDS Mext_1731 NC_010172.1 1954570 1955535 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL3722 putative transmembrane component of ABC transporter; binding-protein-dependent transport system inner membrane protein complement(1954570..1955535) Methylobacterium extorquens PA1 5832234 YP_001639202.1 CDS Mext_1732 NC_010172.1 1955532 1956440 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01825 putative permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein complement(1955532..1956440) Methylobacterium extorquens PA1 5832235 YP_001639203.1 CDS Mext_1733 NC_010172.1 1956430 1957284 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_6033 putative ABC transporter, ATP-binding protein; ABC transporter-like protein complement(1956430..1957284) Methylobacterium extorquens PA1 5831464 YP_001639204.1 CDS Mext_1734 NC_010172.1 1957487 1958095 R PFAM: flavin reductase domain protein FMN-binding; KEGG: atc:AGR_C_4534 putative flavin reductase; flavin reductase domain-containing protein complement(1957487..1958095) Methylobacterium extorquens PA1 5831465 YP_001639205.1 CDS Mext_1735 NC_010172.1 1958141 1958923 R PFAM: alpha/beta hydrolase fold; KEGG: psp:PSPPH_1045 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold protein complement(1958141..1958923) Methylobacterium extorquens PA1 5831466 YP_001639206.1 CDS Mext_1736 NC_010172.1 1958928 1959320 R PFAM: Endoribonuclease L-PSP; KEGG: spe:Spro_1821 endoribonuclease L-PSP; endoribonuclease L-PSP complement(1958928..1959320) Methylobacterium extorquens PA1 5835584 YP_001639207.1 CDS Mext_1737 NC_010172.1 1959333 1960079 R PFAM: isochorismatase hydrolase; KEGG: esa:ESA_02363 hypothetical protein; isochorismatase hydrolase complement(1959333..1960079) Methylobacterium extorquens PA1 5835585 YP_001639208.1 CDS Mext_1738 NC_010172.1 1960079 1961197 R PFAM: luciferase family protein; KEGG: psa:PST_3597 bacterial luciferase family protein; luciferase family protein complement(1960079..1961197) Methylobacterium extorquens PA1 5835586 YP_001639209.1 CDS Mext_1739 NC_010172.1 1961424 1962065 R PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: esa:ESA_02360 hypothetical protein; tetracycline transcriptional regulator YcdC domain-containing protein complement(1961424..1962065) Methylobacterium extorquens PA1 5835587 YP_001639210.1 CDS Mext_1740 NC_010172.1 1962192 1962689 R catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase complement(1962192..1962689) Methylobacterium extorquens PA1 5832985 YP_001639211.1 CDS Mext_1741 NC_010172.1 1962686 1963525 R TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: rpa:RPA0553 hypothetical protein; hypothetical protein complement(1962686..1963525) Methylobacterium extorquens PA1 5832986 YP_001639212.1 CDS Mext_1742 NC_010172.1 1963572 1964822 R PFAM: protein of unknown function DUF989; KEGG: xau:Xaut_3294 protein of unknown function DUF989; hypothetical protein complement(1963572..1964822) Methylobacterium extorquens PA1 5832987 YP_001639213.1 CDS Mext_1743 NC_010172.1 1964957 1965889 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_3293 transcriptional regulator, LysR family; carbonate dehydratase 1964957..1965889 Methylobacterium extorquens PA1 5833051 YP_001639214.1 CDS Mext_1744 NC_010172.1 1965922 1967334 R KEGG: xau:Xaut_3290 chitin deacetylase; TIGRFAM: OHCU decarboxylase; urate catabolism protein; PFAM: polysaccharide deacetylase; urate catabolism protein complement(1965922..1967334) Methylobacterium extorquens PA1 5833052 YP_001639215.1 CDS Mext_1745 NC_010172.1 1967571 1967966 D TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: mes:Meso_2832 transthyretin; hydroxyisourate hydrolase 1967571..1967966 Methylobacterium extorquens PA1 5833053 YP_001639216.1 CDS Mext_1746 NC_010172.1 1968774 1969766 D PFAM: protein of unknown function DUF808; KEGG: rle:RL2395 putative transmembrane protein; hypothetical protein 1968774..1969766 Methylobacterium extorquens PA1 5833054 YP_001639217.1 CDS Mext_1747 NC_010172.1 1969946 1971013 D PFAM: EAL domain protein; KEGG: bja:blr0364 hypothetical protein; EAL domain-containing protein 1969946..1971013 Methylobacterium extorquens PA1 5835814 YP_001639218.1 CDS Mext_1748 NC_010172.1 1971160 1972413 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rru:Rru_A2567 putative diguanylate cyclase (GGDEF domain); diguanylate cyclase 1971160..1972413 Methylobacterium extorquens PA1 5835815 YP_001639219.1 CDS Mext_1749 NC_010172.1 1972640 1973320 D PFAM: OmpW family protein; KEGG: acr:Acry_1957 OmpW family protein; OmpW family protein 1972640..1973320 Methylobacterium extorquens PA1 5835816 YP_001639220.1 CDS Mext_1750 NC_010172.1 1973599 1973961 R hypothetical protein complement(1973599..1973961) Methylobacterium extorquens PA1 5835817 YP_001639221.1 CDS Mext_1751 NC_010172.1 1974103 1974294 D hypothetical protein 1974103..1974294 Methylobacterium extorquens PA1 5835123 YP_001639222.1 CDS Mext_1752 NC_010172.1 1974710 1975006 D hypothetical protein 1974710..1975006 Methylobacterium extorquens PA1 5835124 YP_001639223.1 CDS Mext_1753 NC_010172.1 1975257 1975538 D hypothetical protein 1975257..1975538 Methylobacterium extorquens PA1 5835125 YP_001639224.1 CDS Mext_1754 NC_010172.1 1975580 1977481 D KEGG: pde:Pden_0660 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1975580..1977481 Methylobacterium extorquens PA1 5835126 YP_001639225.1 CDS Mext_1755 NC_010172.1 1977478 1978401 R PFAM: aminoglycoside phosphotransferase; KEGG: swi:Swit_0048 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(1977478..1978401) Methylobacterium extorquens PA1 5834333 YP_001639226.1 CDS Mext_1756 NC_010172.1 1978832 1979623 D PFAM: phospholipid/glycerol acyltransferase; KEGG: xau:Xaut_0019 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 1978832..1979623 Methylobacterium extorquens PA1 5834334 YP_001639227.1 CDS Mext_1757 NC_010172.1 1979713 1979997 D PFAM: protein of unknown function DUF497; KEGG: rpd:RPD_3974 protein of unknown function DUF497; hypothetical protein 1979713..1979997 Methylobacterium extorquens PA1 5834335 YP_001639228.1 CDS Mext_1758 NC_010172.1 1979951 1980280 D KEGG: dvl:Dvul_1491 hypothetical protein; hypothetical protein 1979951..1980280 Methylobacterium extorquens PA1 5834336 YP_001639229.1 CDS Mext_1759 NC_010172.1 1980338 1981027 R TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: bbt:BBta_1187 putative methionine biosynthesis protein (MetW); methionine biosynthesis protein MetW complement(1980338..1981027) Methylobacterium extorquens PA1 5834337 YP_001639230.1 CDS Mext_1760 NC_010172.1 1981034 1982251 R KEGG: mlo:mlr3538 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; homoserine O-acetyltransferase complement(1981034..1982251) Methylobacterium extorquens PA1 5834338 YP_001639231.1 CDS Mext_1761 NC_010172.1 1982558 1983154 D TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: bbt:BBta_5538 peptide methionine sulfoxide reductase MsrB; methionine-R-sulfoxide reductase 1982558..1983154 Methylobacterium extorquens PA1 5834339 YP_001639232.1 CDS Mext_1762 NC_010172.1 1983182 1983904 D TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: bja:blr7043 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase 1983182..1983904 Methylobacterium extorquens PA1 5834340 YP_001639233.1 CDS Mext_1763 NC_010172.1 1983950 1984447 R TIGRFAM: bacterioferritin; PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: bbt:BBta_6242 bacterioferritin (iron storage homoprotein); bacterioferritin complement(1983950..1984447) Methylobacterium extorquens PA1 5834015 YP_001639234.1 CDS Mext_1764 NC_010172.1 1984488 1984778 R KEGG: bbt:BBta_6243 putative bacterioferritin-associated ferredoxin; hypothetical protein complement(1984488..1984778) Methylobacterium extorquens PA1 5834016 YP_001639235.1 CDS Mext_1765 NC_010172.1 1985120 1986067 R PFAM: UspA domain protein; KEGG: rru:Rru_A2612 UspA; UspA domain-containing protein complement(1985120..1986067) Methylobacterium extorquens PA1 5834017 YP_001639236.1 CDS Mext_1766 NC_010172.1 1986097 1987197 R PFAM: acyltransferase 3; KEGG: mlo:mlr6758 exopolysaccharide biosynthesis protein; acyltransferase 3 complement(1986097..1987197) Methylobacterium extorquens PA1 5834018 YP_001639237.1 CDS Mext_1767 NC_010172.1 1987368 1988078 D KEGG: psa:PST_1217 predicted outer membrane protein; hypothetical protein 1987368..1988078 Methylobacterium extorquens PA1 5835039 YP_001639238.1 CDS Mext_1768 NC_010172.1 1988344 1989468 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: atc:AGR_C_1309 hypothetical protein; radical SAM domain-containing protein complement(1988344..1989468) Methylobacterium extorquens PA1 5835040 YP_001639239.1 CDS Mext_1769 NC_010172.1 1989648 1990169 D KEGG: sme:SMc00865 hypothetical protein; hypothetical protein 1989648..1990169 Methylobacterium extorquens PA1 5835041 YP_001639240.1 CDS Mext_1770 NC_010172.1 1990230 1990412 R hypothetical protein complement(1990230..1990412) Methylobacterium extorquens PA1 5835042 YP_001639241.1 CDS rpmG NC_010172.1 1990655 1990822 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(1990655..1990822) Methylobacterium extorquens PA1 5834912 YP_001639242.1 CDS panB NC_010172.1 1990976 1991800 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(1990976..1991800) Methylobacterium extorquens PA1 5834913 YP_001639243.1 CDS Mext_1773 NC_010172.1 1992227 1992622 R PFAM: Thioredoxin domain; KEGG: bra:BRADO6716 putative thioredoxin (H-type,TRX-H); thioredoxin domain-containing protein complement(1992227..1992622) Methylobacterium extorquens PA1 5834914 YP_001639244.1 CDS Mext_1774 NC_010172.1 1992653 1993240 R KEGG: pde:Pden_0023 rhodanese; rhodanese complement(1992653..1993240) Methylobacterium extorquens PA1 5834915 YP_001639245.1 CDS Mext_1775 NC_010172.1 1993258 1994073 R PFAM: Sulphur oxidation protein SoxZ; KEGG: gbe:GbCGDNIH1_2319 hypothetical secreted protein; sulfur oxidation protein SoxZ complement(1993258..1994073) Methylobacterium extorquens PA1 5834626 YP_001639246.1 CDS Mext_1776 NC_010172.1 1994115 1995047 R PFAM: beta-lactamase domain protein; KEGG: gbe:GbCGDNIH1_0107 beta-lactamase; beta-lactamase domain-containing protein complement(1994115..1995047) Methylobacterium extorquens PA1 5834627 YP_001639247.1 CDS Mext_1777 NC_010172.1 1995230 1995817 D PFAM: regulatory protein TetR; KEGG: pst:PSPTO_4267 transcriptional regulator, TetR family; regulatory protein TetR 1995230..1995817 Methylobacterium extorquens PA1 5834628 YP_001639248.1 CDS Mext_1778 NC_010172.1 1995917 1996903 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bja:bll7768 hypothetical protein; cobalamin synthesis protein P47K 1995917..1996903 Methylobacterium extorquens PA1 5834629 YP_001639249.1 CDS Mext_1779 NC_010172.1 1997005 1997319 D hypothetical protein 1997005..1997319 Methylobacterium extorquens PA1 5832897 YP_001639250.1 CDS Mext_1780 NC_010172.1 1997356 1997610 R hypothetical protein complement(1997356..1997610) Methylobacterium extorquens PA1 5832898 YP_001639251.1 CDS Mext_1781 NC_010172.1 1998158 1999621 D KEGG: bja:blr4975 hypothetical protein; hypothetical protein 1998158..1999621 Methylobacterium extorquens PA1 5832899 YP_001639252.1 CDS Mext_1782 NC_010172.1 1999618 2002995 D KEGG: mag:amb1110 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein 1999618..2002995 Methylobacterium extorquens PA1 5832900 YP_001639253.1 CDS Mext_1783 NC_010172.1 2003096 2004544 D PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: xau:Xaut_4117 protein of unknown function DUF463 YcjX family protein; hypothetical protein 2003096..2004544 Methylobacterium extorquens PA1 5831262 YP_001639254.1 CDS Mext_1784 NC_010172.1 2004541 2005563 D PFAM: conserved hypothetical protein; KEGG: mlo:mlr0776 hypothetical protein; hypothetical protein 2004541..2005563 Methylobacterium extorquens PA1 5831263 YP_001639255.1 CDS Mext_1785 NC_010172.1 2005712 2006098 R KEGG: yli:YALI0F00990g hypothetical protein; hypothetical protein complement(2005712..2006098) Methylobacterium extorquens PA1 5831264 YP_001639256.1 CDS Mext_1786 NC_010172.1 2006319 2006870 R PFAM: protein of unknown function DUF1234; KEGG: xau:Xaut_2551 protein of unknown function DUF1234; hypothetical protein complement(2006319..2006870) Methylobacterium extorquens PA1 5831265 YP_001639257.1 CDS Mext_1787 NC_010172.1 2006941 2008209 R TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: xau:Xaut_1740 diaminopimelate decarboxylase; diaminopimelate decarboxylase complement(2006941..2008209) Methylobacterium extorquens PA1 5833555 YP_001639258.1 CDS Mext_1788 NC_010172.1 2008410 2008760 R hypothetical protein complement(2008410..2008760) Methylobacterium extorquens PA1 5833556 YP_001639259.1 CDS Mext_1789 NC_010172.1 2008913 2009191 R hypothetical protein complement(2008913..2009191) Methylobacterium extorquens PA1 5833557 YP_001639260.1 CDS Mext_1790 NC_010172.1 2009382 2010104 R KEGG: bbt:BBta_6565 hypothetical protein; hypothetical protein complement(2009382..2010104) Methylobacterium extorquens PA1 5833558 YP_001639261.1 CDS Mext_1791 NC_010172.1 2010314 2011063 R PFAM: conserved hypothetical protein; KEGG: xau:Xaut_3485 hypothetical protein; hypothetical protein complement(2010314..2011063) Methylobacterium extorquens PA1 5833211 YP_001639262.1 CDS Mext_1792 NC_010172.1 2011283 2011933 R PFAM: ribonuclease HII/HIII; KEGG: mag:amb3989 ribonuclease HII; ribonuclease H complement(2011283..2011933) Methylobacterium extorquens PA1 5833212 YP_001639263.1 CDS Mext_1793 NC_010172.1 2012061 2013137 R PFAM: glycosyl transferase group 1; KEGG: bja:bll8163 glycosyl transferase; group 1 glycosyl transferase complement(2012061..2013137) Methylobacterium extorquens PA1 5833213 YP_001639264.1 CDS Mext_1794 NC_010172.1 2013170 2013982 R PFAM: metallophosphoesterase; KEGG: xau:Xaut_4108 metallophosphoesterase; metallophosphoesterase complement(2013170..2013982) Methylobacterium extorquens PA1 5833214 YP_001639265.1 CDS Mext_1795 NC_010172.1 2014645 2015853 D PFAM: aminotransferase class V; KEGG: gbe:GbCGDNIH1_0048 serine--glyoxylate aminotransferase; serine--glyoxylate transaminase 2014645..2015853 Methylobacterium extorquens PA1 5832996 YP_001639266.1 CDS Mext_1796 NC_010172.1 2016134 2017078 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: gbe:GbCGDNIH1_0049 glycerate dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 2016134..2017078 Methylobacterium extorquens PA1 5832997 YP_001639267.1 CDS Mext_1797 NC_010172.1 2017222 2018088 D PFAM: Methylene-tetrahydromethanopterin dehydrogenase; KEGG: gbe:GbCGDNIH1_0050 methylenetetrahydrofolate dehydrogenase (NADP+); methylenetetrahydrofolate dehydrogenase 2017222..2018088 Methylobacterium extorquens PA1 5832998 YP_001639268.1 CDS Mext_1798 NC_010172.1 2018182 2018808 D PFAM: Formiminotransferase-cyclodeaminase; KEGG: gbe:GbCGDNIH1_0051 methenyltetrahydrofolate cyclohydrolase; formiminotransferase-cyclodeaminase 2018182..2018808 Methylobacterium extorquens PA1 5832999 YP_001639269.1 CDS Mext_1799 NC_010172.1 2019358 2020530 D catalyzes the formation of malyl-CoA from malate and CoA; malate--CoA ligase subunit beta 2019358..2020530 Methylobacterium extorquens PA1 5832921 YP_001639270.1 CDS Mext_1800 NC_010172.1 2020553 2021443 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 2020553..2021443 Methylobacterium extorquens PA1 5832922 YP_001639271.1 CDS Mext_1801 NC_010172.1 2021643 2024411 D PFAM: phosphoenolpyruvate carboxylase; KEGG: gbe:GbCGDNIH1_0054 phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 2021643..2024411 Methylobacterium extorquens PA1 5832923 YP_001639272.1 CDS Mext_1802 NC_010172.1 2024599 2025573 D PFAM: HpcH/HpaI aldolase; KEGG: gbe:GbCGDNIH1_0055 malyl-CoA lyase; citrate (pro-3S)-lyase 2024599..2025573 Methylobacterium extorquens PA1 5832924 YP_001639273.1 CDS Mext_1803 NC_010172.1 2025644 2026210 R PFAM: protein of unknown function DUF1003; KEGG: mes:Meso_1875 protein of unknown function DUF1003; hypothetical protein complement(2025644..2026210) Methylobacterium extorquens PA1 5832167 YP_001639274.1 CDS Mext_1804 NC_010172.1 2026506 2027381 D PFAM: dienelactone hydrolase; KEGG: gvi:glr3401 probable carboxymethylenebutenolidase; carboxymethylenebutenolidase 2026506..2027381 Methylobacterium extorquens PA1 5832168 YP_001639275.1 CDS Mext_1805 NC_010172.1 2027389 2027766 R PFAM: transcriptional coactivator/pterin dehydratase; KEGG: gbe:GbCGDNIH1_0777 pterin-4-alpha-carbinolamine dehydratase; transcriptional coactivator/pterin dehydratase complement(2027389..2027766) Methylobacterium extorquens PA1 5832169 YP_001639276.1 CDS Mext_1806 NC_010172.1 2027993 2028988 D KEGG: xau:Xaut_1785 putative ABC transporter periplasmic solute-binding protein; putative ABC transporter periplasmic solute-binding protein 2027993..2028988 Methylobacterium extorquens PA1 5832170 YP_001639277.1 CDS Mext_1807 NC_010172.1 2029028 2029762 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_1784 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2029028..2029762 Methylobacterium extorquens PA1 5831941 YP_001639278.1 CDS Mext_1808 NC_010172.1 2029743 2030516 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_1783 ABC transporter related; ABC transporter-like protein 2029743..2030516 Methylobacterium extorquens PA1 5831942 YP_001639279.1 CDS Mext_1809 NC_010172.1 2031223 2033028 D TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: xau:Xaut_1781 pyrrolo-quinoline quinone; methanol/ethanol family PQQ-dependent dehydrogenase 2031223..2033028 Methylobacterium extorquens PA1 5831943 YP_001639280.1 CDS Mext_1810 NC_010172.1 2033150 2033773 D KEGG: bbt:BBta_5969 putative cytochrome c protein; hypothetical protein 2033150..2033773 Methylobacterium extorquens PA1 5831944 YP_001639281.1 CDS Mext_1811 NC_010172.1 2033773 2034627 D SMART: extracellular solute-binding protein family 3; KEGG: xau:Xaut_1779 extracellular solute-binding protein family 3; extracellular solute-binding protein 2033773..2034627 Methylobacterium extorquens PA1 5830976 YP_001639282.1 CDS Mext_1812 NC_010172.1 2034733 2035209 R KEGG: mes:Meso_1414 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(2034733..2035209) Methylobacterium extorquens PA1 5830977 YP_001639283.1 CDS Mext_1813 NC_010172.1 2035206 2035598 R TIGRFAM: dihydroneopterin aldolase; KEGG: gtn:GTNG_0070 dihydroneopterin aldolase; dihydroneopterin aldolase complement(2035206..2035598) Methylobacterium extorquens PA1 5830978 YP_001639284.1 CDS Mext_1814 NC_010172.1 2035591 2036460 R KEGG: bbt:BBta_3026 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase complement(2035591..2036460) Methylobacterium extorquens PA1 5830979 YP_001639285.1 CDS Mext_1815 NC_010172.1 2036555 2036884 R KEGG: xau:Xaut_1797 hypothetical protein; hypothetical protein complement(2036555..2036884) Methylobacterium extorquens PA1 5831576 YP_001639286.1 CDS Mext_1816 NC_010172.1 2036901 2037635 R KEGG: xau:Xaut_1798 hypothetical protein; hypothetical protein complement(2036901..2037635) Methylobacterium extorquens PA1 5831577 YP_001639287.1 CDS Mext_1817 NC_010172.1 2037632 2038786 R TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; KEGG: xau:Xaut_1799 coenzyme PQQ biosynthesis protein E; pyrroloquinoline quinone biosynthesis protein PqqE complement(2037632..2038786) Methylobacterium extorquens PA1 5831578 YP_001639288.1 CDS Mext_1818 NC_010172.1 2038783 2039883 R Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC complement(2038783..2039883) Methylobacterium extorquens PA1 5831296 YP_001639289.1 CDS Mext_1819 NC_010172.1 2040050 2040949 R possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB complement(2040050..2040949) Methylobacterium extorquens PA1 5831297 YP_001639290.1 CDS Mext_1820 NC_010172.1 2040997 2041179 R PFAM: coenzyme PQQ biosynthesis protein A; coenzyme PQQ biosynthesis protein A complement(2040997..2041179) Methylobacterium extorquens PA1 5831298 YP_001639291.1 CDS Mext_1821 NC_010172.1 2041421 2042128 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xau:Xaut_1803 two component transcriptional regulator, winged helix family; response regulator receiver complement(2041421..2042128) Methylobacterium extorquens PA1 5831299 YP_001639292.1 CDS Mext_1822 NC_010172.1 2042125 2043762 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: xau:Xaut_1804 integral membrane sensor signal transduction histidine kinase; ATPase domain-containing protein complement(2042125..2043762) Methylobacterium extorquens PA1 5831317 YP_001639293.1 CDS Mext_1823 NC_010172.1 2043871 2044077 R KEGG: xau:Xaut_0033 hypothetical protein; hypothetical protein complement(2043871..2044077) Methylobacterium extorquens PA1 5831318 YP_001639294.1 CDS Mext_1824 NC_010172.1 2044225 2045022 R TIGRFAM: formylmethanofuran dehydrogenase subunit C; PFAM: glutamate synthase alpha subunit domain protein; KEGG: gbe:GbCGDNIH1_0781 tungsten-containing formylmethanofuran dehydrogenase, subunit C; formylmethanofuran dehydrogenase subunit C complement(2044225..2045022) Methylobacterium extorquens PA1 5831319 YP_001639295.1 CDS Mext_1825 NC_010172.1 2045019 2045954 R catalyzes the transfer of a formyl group from formylmethanofuran to tetrahydromethanopterin tetrahydromethanopterin; formylmethanofuran--tetrahydromethanopterin formyltransferase complement(2045019..2045954) Methylobacterium extorquens PA1 5831320 YP_001639296.1 CDS Mext_1826 NC_010172.1 2045980 2047626 R TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3; KEGG: gbe:GbCGDNIH1_0779 tungsten-containing formylmethanofuran dehydrogenase, subunit A; formylmethanofuran dehydrogenase subunit A complement(2045980..2047626) Methylobacterium extorquens PA1 5831044 YP_001639297.1 CDS Mext_1827 NC_010172.1 2047620 2048708 R KEGG: gbe:GbCGDNIH1_0778 tungsten-containing formylmethanofuran dehydrogenase, subunit B; tungsten-containing formylmethanofuran dehydrogenase subunit B complement(2047620..2048708) Methylobacterium extorquens PA1 5831045 YP_001639298.1 CDS Mext_1828 NC_010172.1 2049113 2050135 D TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: mca:MCA2861 kinase, GHMP family, putative; beta-ribofuranosylaminobenzene 5'-phosphate synthase 2049113..2050135 Methylobacterium extorquens PA1 5831046 YP_001639299.1 CDS Mext_1829 NC_010172.1 2050246 2051139 D PFAM: Methylene-tetrahydromethanopterin dehydrogenase; KEGG: gbe:GbCGDNIH1_0775 methylenetetrahydromethanopterin dehydrogenase (NAD+/NADP+); methylene-tetrahydromethanopterin dehydrogenase 2050246..2051139 Methylobacterium extorquens PA1 5831047 YP_001639300.1 CDS Mext_1830 NC_010172.1 2051250 2052374 D PFAM: protein of unknown function DUF201; KEGG: xau:Xaut_3534 protein of unknown function DUF201; hypothetical protein 2051250..2052374 Methylobacterium extorquens PA1 5832053 YP_001639301.1 CDS Mext_1831 NC_010172.1 2052304 2053275 D catalyzes the reversible formation of methenyl-H(4)methanopterin from N(5)-formyl-H(4)methanopterin; N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase 2052304..2053275 Methylobacterium extorquens PA1 5832054 YP_001639302.1 CDS Mext_1832 NC_010172.1 2053553 2054467 D TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: gbe:GbCGDNIH1_0772 ribosomal protein S6 modification protein; alpha-L-glutamate ligase 2053553..2054467 Methylobacterium extorquens PA1 5832055 YP_001639303.1 CDS Mext_1833 NC_010172.1 2054464 2055333 D PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: mfa:Mfla_1656 triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA protein 2054464..2055333 Methylobacterium extorquens PA1 5832904 YP_001639304.1 CDS Mext_1834 NC_010172.1 2055591 2056103 D TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: xau:Xaut_0032 formaldehyde-activating enzyme (Fae); formaldehyde-activating enzyme 2055591..2056103 Methylobacterium extorquens PA1 5832905 YP_001639305.1 CDS Mext_1835 NC_010172.1 2056243 2056938 R PFAM: histidine biosynthesis protein; KEGG: xau:Xaut_3531 histidine biosynthesis protein; histidine biosynthesis protein complement(2056243..2056938) Methylobacterium extorquens PA1 5832906 YP_001639306.1 CDS Mext_1836 NC_010172.1 2056987 2057976 D TIGRFAM: H4MPT-linked C1 transfer pathway protein; PFAM: Hydantoinase/oxoprolinase; KEGG: gbe:GbCGDNIH1_0768 hydantoinase/oxoprolinase family protein; H4MPT-linked C1 transfer pathway protein 2056987..2057976 Methylobacterium extorquens PA1 5832907 YP_001639307.1 CDS Mext_1837 NC_010172.1 2058029 2058229 D hypothetical protein 2058029..2058229 Methylobacterium extorquens PA1 5832585 YP_001639308.1 CDS Mext_1838 NC_010172.1 2058283 2059383 R TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: bbt:BBta_4384 putative exported protein of unknown function; hypothetical protein complement(2058283..2059383) Methylobacterium extorquens PA1 5832586 YP_001639309.1 CDS Mext_1839 NC_010172.1 2059515 2060045 R KEGG: bra:BRADO4013 conserved hypothetical protein; putative signal peptide; putative signal peptide complement(2059515..2060045) Methylobacterium extorquens PA1 5832587 YP_001639310.1 CDS Mext_1840 NC_010172.1 2060112 2060645 R KEGG: xau:Xaut_0030 putative exported protein of unknown function; hypothetical protein complement(2060112..2060645) Methylobacterium extorquens PA1 5832588 YP_001639311.1 CDS Mext_1841 NC_010172.1 2060687 2061283 R KEGG: gbe:GbCGDNIH1_0766 hypothetical protein; hypothetical protein complement(2060687..2061283) Methylobacterium extorquens PA1 5833903 YP_001639312.1 CDS Mext_1842 NC_010172.1 2061341 2062915 R PFAM: dihydropteroate synthase DHPS; KEGG: gbe:GbCGDNIH1_0765 dihydropteroate synthase; dihydropteroate synthase DHPS complement(2061341..2062915) Methylobacterium extorquens PA1 5833904 YP_001639313.1 CDS Mext_1843 NC_010172.1 2062912 2063526 R PFAM: aspartate/glutamate/uridylate kinase; KEGG: xau:Xaut_4102 amino acid kinase family protein; aspartate/glutamate/uridylate kinase complement(2062912..2063526) Methylobacterium extorquens PA1 5833905 YP_001639314.1 CDS Mext_1844 NC_010172.1 2063532 2064242 R KEGG: noc:Noc_0020 hypothetical protein; hypothetical protein complement(2063532..2064242) Methylobacterium extorquens PA1 5833906 YP_001639315.1 CDS Mext_1845 NC_010172.1 2064288 2064821 R KEGG: xau:Xaut_0029 hypothetical protein; hypothetical protein complement(2064288..2064821) Methylobacterium extorquens PA1 5832601 YP_001639316.1 CDS Mext_1846 NC_010172.1 2065033 2066322 D KEGG: xau:Xaut_0028 putative exported protein of unknown function; hypothetical protein 2065033..2066322 Methylobacterium extorquens PA1 5832602 YP_001639317.1 CDS Mext_1847 NC_010172.1 2066489 2067475 D TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: xau:Xaut_0027 40-residue YVTN family beta-propeller repeat protein; hypothetical protein 2066489..2067475 Methylobacterium extorquens PA1 5832603 YP_001639318.1 CDS Mext_1848 NC_010172.1 2067567 2068001 D KEGG: pmy:Pmen_1949 hypothetical protein; hypothetical protein 2067567..2068001 Methylobacterium extorquens PA1 5831821 YP_001639319.1 CDS Mext_1849 NC_010172.1 2068010 2068417 D hypothetical protein 2068010..2068417 Methylobacterium extorquens PA1 5831822 YP_001639320.1 CDS Mext_1850 NC_010172.1 2068414 2069163 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pde:Pden_0029 ABC transporter related; ABC transporter-like protein 2068414..2069163 Methylobacterium extorquens PA1 5831823 YP_001639321.1 CDS Mext_1851 NC_010172.1 2069160 2070053 D PFAM: ABC-2 type transporter; KEGG: xau:Xaut_0025 ABC-2 type transporter; ABC-2 type transporter 2069160..2070053 Methylobacterium extorquens PA1 5831824 YP_001639322.1 CDS Mext_1852 NC_010172.1 2070064 2070693 D KEGG: xau:Xaut_0024 hypothetical protein; hypothetical protein 2070064..2070693 Methylobacterium extorquens PA1 5831858 YP_001639323.1 CDS Mext_1853 NC_010172.1 2071240 2073759 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gbe:GbCGDNIH1_1908 probable TonB-dependent receptor YncD precursor; TonB-dependent receptor 2071240..2073759 Methylobacterium extorquens PA1 5831859 YP_001639324.1 CDS Mext_1854 NC_010172.1 2074078 2074479 D KEGG: rpe:RPE_4188 hypothetical protein; hypothetical protein 2074078..2074479 Methylobacterium extorquens PA1 5831860 YP_001639325.1 CDS Mext_1855 NC_010172.1 2074683 2075042 D hypothetical protein 2074683..2075042 Methylobacterium extorquens PA1 5831861 YP_001639326.1 CDS Mext_1856 NC_010172.1 2075146 2076756 R TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: rpa:RPA2750 probable glycosyl transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase complement(2075146..2076756) Methylobacterium extorquens PA1 5831624 YP_001639327.1 CDS Mext_1857 NC_010172.1 2076834 2078093 R PFAM: glycosyl transferase group 1; KEGG: nwi:Nwi_1413 glycosyl transferase, group 1; group 1 glycosyl transferase complement(2076834..2078093) Methylobacterium extorquens PA1 5831625 YP_001639328.1 CDS Mext_1858 NC_010172.1 2078266 2078844 R PFAM: polysaccharide export protein; KEGG: rpb:RPB_4708 polysaccharide export protein; polysaccharide export protein complement(2078266..2078844) Methylobacterium extorquens PA1 5831626 YP_001639329.1 CDS Mext_1859 NC_010172.1 2079066 2081480 D PFAM: lipopolysaccharide biosynthesis protein; KEGG: rpe:RPE_2845 lipopolysaccharide biosynthesis; lipopolysaccharide biosynthesis protein 2079066..2081480 Methylobacterium extorquens PA1 5831627 YP_001639330.1 CDS Mext_1860 NC_010172.1 2082035 2082358 R PFAM: conserved hypothetical protein; KEGG: atc:AGR_C_145 hypothetical protein; hypothetical protein complement(2082035..2082358) Methylobacterium extorquens PA1 5831493 YP_001639331.1 CDS Mext_1861 NC_010172.1 2082448 2084334 R KEGG: bja:bll8116 DNA polymerase III tau subunit; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau complement(2082448..2084334) Methylobacterium extorquens PA1 5831494 YP_001639332.1 CDS Mext_1862 NC_010172.1 2084591 2085079 D KEGG: hch:HCH_03671 hypothetical protein; hypothetical protein 2084591..2085079 Methylobacterium extorquens PA1 5832645 YP_001639333.1 CDS Mext_1863 NC_010172.1 2085114 2085374 R KEGG: bov:BOV_1568 hypothetical protein; hypothetical protein complement(2085114..2085374) Methylobacterium extorquens PA1 5832646 YP_001639334.1 CDS Mext_1864 NC_010172.1 2085744 2087033 D PFAM: integrase family protein; KEGG: mes:Meso_3806 phage integrase; integrase family protein 2085744..2087033 Methylobacterium extorquens PA1 5832647 YP_001639335.1 CDS Mext_1865 NC_010172.1 2087401 2088867 D PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rpc:RPC_1770 cytidine/deoxycytidylate deaminase, zinc-binding region; zinc-binding CMP/dCMP deaminase 2087401..2088867 Methylobacterium extorquens PA1 5831501 YP_001639336.1 CDS Mext_1866 NC_010172.1 2089571 2089894 R hypothetical protein complement(2089571..2089894) Methylobacterium extorquens PA1 5831502 YP_001639337.1 CDS Mext_1867 NC_010172.1 2090183 2090449 D hypothetical protein 2090183..2090449 Methylobacterium extorquens PA1 5831503 YP_001639338.1 CDS Mext_1868 NC_010172.1 2090462 2090959 D hypothetical protein 2090462..2090959 Methylobacterium extorquens PA1 5831504 YP_001639339.1 CDS Mext_1869 NC_010172.1 2090963 2091214 D hypothetical protein 2090963..2091214 Methylobacterium extorquens PA1 5833134 YP_001639340.1 CDS Mext_1870 NC_010172.1 2091306 2091887 D hypothetical protein 2091306..2091887 Methylobacterium extorquens PA1 5833135 YP_001639341.1 CDS Mext_1871 NC_010172.1 2092385 2092669 D hypothetical protein 2092385..2092669 Methylobacterium extorquens PA1 5833136 YP_001639342.1 CDS Mext_1872 NC_010172.1 2092666 2092896 D hypothetical protein 2092666..2092896 Methylobacterium extorquens PA1 5833137 YP_001639343.1 CDS Mext_1873 NC_010172.1 2092893 2094290 D PFAM: DnaB domain protein helicase domain protein; KEGG: rpe:RPE_3317 replicative DNA helicase; DnaB domain-containing protein 2092893..2094290 Methylobacterium extorquens PA1 5833192 YP_001639344.1 CDS Mext_1874 NC_010172.1 2094287 2095234 D PFAM: protein of unknown function DUF1376; KEGG: mlo:mll2129 hypothetical protein; hypothetical protein 2094287..2095234 Methylobacterium extorquens PA1 5833193 YP_001639345.1 CDS Mext_1875 NC_010172.1 2095234 2096310 D KEGG: xau:Xaut_3435 hypothetical protein; hypothetical protein 2095234..2096310 Methylobacterium extorquens PA1 5833194 YP_001639346.1 CDS Mext_1876 NC_010172.1 2096408 2096803 D KEGG: nha:Nham_2842 hypothetical protein; hypothetical protein 2096408..2096803 Methylobacterium extorquens PA1 5832953 YP_001639347.1 CDS Mext_1877 NC_010172.1 2097243 2097833 D hypothetical protein 2097243..2097833 Methylobacterium extorquens PA1 5832954 YP_001639348.1 CDS Mext_1878 NC_010172.1 2097844 2098395 D hypothetical protein 2097844..2098395 Methylobacterium extorquens PA1 5832955 YP_001639349.1 CDS Mext_1879 NC_010172.1 2099224 2099472 R hypothetical protein complement(2099224..2099472) Methylobacterium extorquens PA1 5832956 YP_001639350.1 CDS Mext_1880 NC_010172.1 2099691 2100482 D PFAM: regulatory protein Crp; KEGG: bbt:BBta_0252 putative transcriptional regulator with a cAMP-binding domain-like, Crp/Fnr family; regulatory protein Crp 2099691..2100482 Methylobacterium extorquens PA1 5831595 YP_001639351.1 CDS Mext_1881 NC_010172.1 2100534 2103152 D KEGG: ccr:CC_0836 sensor histidine kinase, putative; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein 2100534..2103152 Methylobacterium extorquens PA1 5831596 YP_001639352.1 CDS Mext_1882 NC_010172.1 2103182 2103508 D PFAM: response regulator receiver; KEGG: rpb:RPB_4041 response regulator receiver domain protein; response regulator receiver 2103182..2103508 Methylobacterium extorquens PA1 5831597 YP_001639353.1 CDS Mext_1883 NC_010172.1 2104190 2104366 R KEGG: mms:mma_2325 hypothetical protein; hypothetical protein complement(2104190..2104366) Methylobacterium extorquens PA1 5831598 YP_001639354.1 CDS Mext_1884 NC_010172.1 2104763 2105254 R PFAM: protein of unknown function DUF937; KEGG: nha:Nham_3880 protein of unknown function DUF937; hypothetical protein complement(2104763..2105254) Methylobacterium extorquens PA1 5832967 YP_001639355.1 CDS Mext_1885 NC_010172.1 2105385 2106356 R KEGG: smd:Smed_5683 conserved hypothetical membrane spanning protein; hypothetical protein complement(2105385..2106356) Methylobacterium extorquens PA1 5832968 YP_001639356.1 CDS Mext_1886 NC_010172.1 2106704 2106991 R hypothetical protein complement(2106704..2106991) Methylobacterium extorquens PA1 5832969 YP_001639357.1 CDS Mext_1887 NC_010172.1 2107178 2107627 R PFAM: protein of unknown function DUF1452; KEGG: nwi:Nwi_1145 protein of unknown function DUF1452; hypothetical protein complement(2107178..2107627) Methylobacterium extorquens PA1 5832970 YP_001639358.1 CDS Mext_1888 NC_010172.1 2108114 2109094 D KEGG: mlo:mlr8083 two-component, sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein 2108114..2109094 Methylobacterium extorquens PA1 5832925 YP_001639359.1 CDS Mext_1889 NC_010172.1 2109098 2109940 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: rsh:Rsph17029_2967 PAS/PAC sensor hybrid histidine kinase; ATPase domain-containing protein complement(2109098..2109940) Methylobacterium extorquens PA1 5832926 YP_001639360.1 CDS Mext_1890 NC_010172.1 2109943 2110194 D hypothetical protein 2109943..2110194 Methylobacterium extorquens PA1 5832927 YP_001639361.1 CDS Mext_1891 NC_010172.1 2110455 2111201 R KEGG: rpa:RPA1404 glutamyl-tRNA(Gln) amidotransferase subunit A; Urea carboxylase complement(2110455..2111201) Methylobacterium extorquens PA1 5833532 YP_001639362.1 CDS Mext_1892 NC_010172.1 2112991 2113200 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ccr:CC_2903 cold-shock domain family protein; DNA-binding cold-shock protein complement(2112991..2113200) Methylobacterium extorquens PA1 5833533 YP_001639363.1 CDS Mext_1893 NC_010172.1 2114332 2114541 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ret:RHE_PF00130 putative cold shock protein; DNA-binding cold-shock protein complement(2114332..2114541) Methylobacterium extorquens PA1 5833534 YP_001639364.1 CDS Mext_1894 NC_010172.1 2115151 2116314 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; HWE histidine kinase; histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; KEGG: ccr:CC_0285 sensory box histidine kinase; PAS sensor protein complement(2115151..2116314) Methylobacterium extorquens PA1 5833535 YP_001639365.1 CDS Mext_1895 NC_010172.1 2116468 2116848 D PFAM: response regulator receiver; KEGG: rpb:RPB_4041 response regulator receiver domain protein; response regulator receiver 2116468..2116848 Methylobacterium extorquens PA1 5835248 YP_001639366.1 CDS Mext_1896 NC_010172.1 2116875 2117234 D KEGG: mlo:msr8735 hypothetical protein; hypothetical protein 2116875..2117234 Methylobacterium extorquens PA1 5835249 YP_001639367.1 CDS Mext_1897 NC_010172.1 2117259 2117456 R hypothetical protein complement(2117259..2117456) Methylobacterium extorquens PA1 5835250 YP_001639368.1 CDS Mext_1898 NC_010172.1 2117678 2118019 D hypothetical protein 2117678..2118019 Methylobacterium extorquens PA1 5835251 YP_001639369.1 CDS Mext_1899 NC_010172.1 2118571 2118813 R hypothetical protein complement(2118571..2118813) Methylobacterium extorquens PA1 5834063 YP_001639370.1 CDS Mext_1900 NC_010172.1 2119414 2119632 D KEGG: ava:Ava_C0129 transposase; transposase 2119414..2119632 Methylobacterium extorquens PA1 5834064 YP_001639371.1 CDS Mext_1901 NC_010172.1 2119755 2120228 D PFAM: Integrase catalytic region; KEGG: rso:RSp1628 ISRSO16-transposase orfB protein; integrase catalytic subunit 2119755..2120228 Methylobacterium extorquens PA1 5834065 YP_001639372.1 CDS Mext_1902 NC_010172.1 2120370 2120567 R KEGG: smd:Smed_1425 hypothetical protein; hypothetical protein complement(2120370..2120567) Methylobacterium extorquens PA1 5834066 YP_001639373.1 CDS Mext_1903 NC_010172.1 2120692 2120922 R hypothetical protein complement(2120692..2120922) Methylobacterium extorquens PA1 5833960 YP_001639374.1 CDS Mext_1904 NC_010172.1 2121145 2121885 D KEGG: xau:Xaut_0335 Mg chelatase, subunit ChlI; Mg chelatase subunit ChlI 2121145..2121885 Methylobacterium extorquens PA1 5833961 YP_001639375.1 CDS Mext_1905 NC_010172.1 2121934 2123691 D PFAM: Resolvase domain; Recombinase; KEGG: nha:Nham_0143 recombinase; recombinase 2121934..2123691 Methylobacterium extorquens PA1 5833962 YP_001639376.1 CDS Mext_1906 NC_010172.1 2123744 2125480 R hypothetical protein complement(2123744..2125480) Methylobacterium extorquens PA1 5833166 YP_001639377.1 CDS Mext_1907 NC_010172.1 2125935 2126681 R TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: mpt:Mpe_A1581 NADH oxidoreductase; arsenical resistance protein ArsH complement(2125935..2126681) Methylobacterium extorquens PA1 5833167 YP_001639378.1 CDS Mext_1908 NC_010172.1 2126729 2127091 D PFAM: regulatory protein ArsR; KEGG: xau:Xaut_0874 regulatory protein ArsR; regulatory protein ArsR 2126729..2127091 Methylobacterium extorquens PA1 5833168 YP_001639379.1 CDS Mext_1909 NC_010172.1 2127084 2127611 D PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rpd:RPD_3419 low molecular weight phosphotyrosine protein phosphatase; low molecular weight phosphotyrosine protein phosphatase 2127084..2127611 Methylobacterium extorquens PA1 5833169 YP_001639380.1 CDS Mext_1910 NC_010172.1 2127611 2128036 D TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: mes:Meso_0324 arsenate reductase; arsenate reductase 2127611..2128036 Methylobacterium extorquens PA1 5835734 YP_001639381.1 CDS Mext_1911 NC_010172.1 2128071 2129366 D TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: acr:Acry_2813 arsenical pump membrane protein; arsenical pump membrane protein 2128071..2129366 Methylobacterium extorquens PA1 5835735 YP_001639382.1 CDS Mext_1912 NC_010172.1 2129400 2130284 R hypothetical protein complement(2129400..2130284) Methylobacterium extorquens PA1 5835736 YP_001639383.1 CDS Mext_1913 NC_010172.1 2130489 2131076 R KEGG: rme:Rmet_6081 hypothetical protein; hypothetical protein complement(2130489..2131076) Methylobacterium extorquens PA1 5835737 YP_001639384.1 CDS Mext_1914 NC_010172.1 2131177 2131494 D KEGG: mes:Meso_4202 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 2131177..2131494 Methylobacterium extorquens PA1 5835218 YP_001639385.1 CDS Mext_1915 NC_010172.1 2131541 2132896 D KEGG: mlo:mll2164 probable secreted protein; putative secreted protein 2131541..2132896 Methylobacterium extorquens PA1 5835219 YP_001639386.1 CDS Mext_1916 NC_010172.1 2132893 2134056 D PFAM: major facilitator superfamily MFS_1; KEGG: oan:Oant_3196 major facilitator superfamily MFS_1; major facilitator transporter 2132893..2134056 Methylobacterium extorquens PA1 5835220 YP_001639387.1 CDS Mext_1917 NC_010172.1 2134827 2136185 D hypothetical protein 2134827..2136185 Methylobacterium extorquens PA1 5835221 YP_001639388.1 CDS Mext_1918 NC_010172.1 2136738 2137847 D KEGG: bam:Bamb_6604 hypothetical protein; hypothetical protein 2136738..2137847 Methylobacterium extorquens PA1 5835150 YP_001639389.1 CDS Mext_1919 NC_010172.1 2137892 2138248 D hypothetical protein 2137892..2138248 Methylobacterium extorquens PA1 5835151 YP_001639390.1 CDS Mext_1920 NC_010172.1 2138272 2139024 R SMART: TIR protein; KEGG: noc:Noc_A0023 TIR; TIR protein complement(2138272..2139024) Methylobacterium extorquens PA1 5835152 YP_001639391.1 CDS Mext_1921 NC_010172.1 2139229 2139525 D KEGG: tme:Tmel_1086 hypothetical protein; hypothetical protein 2139229..2139525 Methylobacterium extorquens PA1 5835153 YP_001639392.1 CDS Mext_1922 NC_010172.1 2139528 2140079 R PFAM: metallophosphoesterase; KEGG: sme:SMb20398 hypothetical protein; metallophosphoesterase complement(2139528..2140079) Methylobacterium extorquens PA1 5834524 YP_001639393.1 CDS Mext_1923 NC_010172.1 2140293 2141213 D PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bja:bll0661 magnesium chelatase family protein; magnesium chelatase ChlI subunit 2140293..2141213 Methylobacterium extorquens PA1 5834525 YP_001639394.1 CDS Mext_1924 NC_010172.1 2141512 2142120 D PFAM: Glutathione S-transferase domain; KEGG: bbt:BBta_3119 putative glutathione S-transferase; glutathione S-transferase domain-containing protein 2141512..2142120 Methylobacterium extorquens PA1 5834526 YP_001639395.1 CDS Mext_1925 NC_010172.1 2142297 2143493 D PFAM: domain of unknown function DUF1745; KEGG: mlo:mlr1131 hypothetical protein; hypothetical protein 2142297..2143493 Methylobacterium extorquens PA1 5834527 YP_001639396.1 CDS Mext_1926 NC_010172.1 2143504 2144868 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mlo:mlr1132 probable two-component sensor; ATPase domain-containing protein 2143504..2144868 Methylobacterium extorquens PA1 5833088 YP_001639397.1 CDS Mext_1927 NC_010172.1 2144891 2145214 R hypothetical protein complement(2144891..2145214) Methylobacterium extorquens PA1 5833089 YP_001639398.1 CDS Mext_1928 NC_010172.1 2145527 2146195 R PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: rpd:RPD_3279 transglutaminase-like cysteine peptidase, BTLCP; transglutaminase complement(2145527..2146195) Methylobacterium extorquens PA1 5833090 YP_001639399.1 CDS Mext_1929 NC_010172.1 2146439 2146858 D PFAM: thioesterase superfamily protein; KEGG: xau:Xaut_2128 thioesterase superfamily protein; thioesterase superfamily protein 2146439..2146858 Methylobacterium extorquens PA1 5833559 YP_001639400.1 CDS Mext_1930 NC_010172.1 2146894 2147799 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ccr:CC_2298 carboxylesterase family protein; alpha/beta hydrolase domain-containing protein complement(2146894..2147799) Methylobacterium extorquens PA1 5833560 YP_001639401.1 CDS Mext_1931 NC_010172.1 2147863 2148849 R PFAM: Sporulation domain protein; Lytic transglycosylase catalytic; KEGG: xau:Xaut_3156 lytic transglycosylase catalytic; lytic transglycosylase complement(2147863..2148849) Methylobacterium extorquens PA1 5833561 YP_001639402.1 CDS Mext_1932 NC_010172.1 2149016 2151196 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: gbe:GbCGDNIH1_1142 molybdopterin dependent oxidoreductase; molybdopterin oxidoreductase 2149016..2151196 Methylobacterium extorquens PA1 5833562 YP_001639403.1 CDS Mext_1933 NC_010172.1 2151303 2152931 D PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bra:BRADO1006 putative oligopeptide transport protein (ABC superfamily, atp_bind); ABC transporter-like protein 2151303..2152931 Methylobacterium extorquens PA1 5833277 YP_001639404.1 CDS Mext_1934 NC_010172.1 2152935 2154155 D KEGG: ret:RHE_CH00198 phosphopentomutase protein; TIGRFAM: phosphopentomutase; PFAM: metalloenzyme domain protein; Phosphopentomutase domain protein; phosphopentomutase 2152935..2154155 Methylobacterium extorquens PA1 5833278 YP_001639405.1 CDS Mext_1935 NC_010172.1 2154444 2156096 R ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein complement(2154444..2156096) Methylobacterium extorquens PA1 5833279 YP_001639406.1 CDS Mext_1936 NC_010172.1 2156332 2156610 R KEGG: bxe:Bxe_B0032 hypothetical protein; hypothetical protein complement(2156332..2156610) Methylobacterium extorquens PA1 5833280 YP_001639407.1 CDS Mext_1937 NC_010172.1 2156621 2157514 R PFAM: DNA/RNA non-specific endonuclease; KEGG: pol:Bpro_5415 DNA/RNA non-specific endonuclease; DNA/RNA non-specific endonuclease complement(2156621..2157514) Methylobacterium extorquens PA1 5832593 YP_001639408.1 CDS Mext_1938 NC_010172.1 2157522 2157776 R hypothetical protein complement(2157522..2157776) Methylobacterium extorquens PA1 5832594 YP_001639409.1 CDS Mext_1939 NC_010172.1 2158109 2160082 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2158109..2160082 Methylobacterium extorquens PA1 5832595 YP_001639410.1 CDS Mext_1940 NC_010172.1 2160291 2161316 D TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: reu:Reut_B4897 NAD-dependent epimerase/dehydratase:short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase:NmrA-like; hopanoid-associated sugar epimerase 2160291..2161316 Methylobacterium extorquens PA1 5832596 YP_001639411.1 CDS Mext_1941 NC_010172.1 2161313 2162212 D TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: rpa:RPA3743 possible phytoene synthase-related protein; squalene synthase 2161313..2162212 Methylobacterium extorquens PA1 5831825 YP_001639412.1 CDS Mext_1942 NC_010172.1 2162209 2163060 D TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: rpa:RPA3742 putative poly-isoprenyl transferase; squalene synthase 2162209..2163060 Methylobacterium extorquens PA1 5831826 YP_001639413.1 CDS Mext_1943 NC_010172.1 2163060 2164361 D TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; KEGG: rpc:RPC_1719 amine oxidase; squalene-associated FAD-dependent desaturase 2163060..2164361 Methylobacterium extorquens PA1 5831827 YP_001639414.1 CDS Mext_1944 NC_010172.1 2164406 2166409 D KEGG: nha:Nham_2682 squalene cyclase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene-hopene cyclase 2164406..2166409 Methylobacterium extorquens PA1 5831828 YP_001639415.1 CDS Mext_1945 NC_010172.1 2166543 2167211 D KEGG: mlo:mlr3555 hypothetical protein; hypothetical protein 2166543..2167211 Methylobacterium extorquens PA1 5831381 YP_001639416.1 CDS Mext_1946 NC_010172.1 2167306 2168679 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class I and II; aminotransferase class-III; KEGG: bpl:BURPS1106A_3269 putative 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase complement(2167306..2168679) Methylobacterium extorquens PA1 5831382 YP_001639417.1 CDS Mext_1947 NC_010172.1 2168676 2176082 R PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: sme:SMc02273 fatty acid synthase transmembrane protein; beta-ketoacyl synthase complement(2168676..2176082) Methylobacterium extorquens PA1 5831383 YP_001639418.1 CDS Mext_1948 NC_010172.1 2176602 2177906 R KEGG: xau:Xaut_3551 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase complement(2176602..2177906) Methylobacterium extorquens PA1 5831384 YP_001639419.1 CDS Mext_1949 NC_010172.1 2178006 2180159 R PFAM: glycosyl transferase family 2; KEGG: bch:Bcen2424_0878 glycosyl transferase, family 2; glycosyl transferase family protein complement(2178006..2180159) Methylobacterium extorquens PA1 5832022 YP_001639420.1 CDS Mext_1950 NC_010172.1 2180166 2181212 R KEGG: xau:Xaut_3818 hypothetical protein; hypothetical protein complement(2180166..2181212) Methylobacterium extorquens PA1 5832023 YP_001639421.1 CDS Mext_1951 NC_010172.1 2181780 2183078 R PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_1247 major facilitator superfamily MFS_1; major facilitator transporter complement(2181780..2183078) Methylobacterium extorquens PA1 5832025 YP_001639422.1 CDS Mext_1952 NC_010172.1 2183698 2185080 D PFAM: Ethanolamine ammonia lyase large subunit; KEGG: xau:Xaut_4034 ethanolamine ammonia lyase large subunit; ethanolamine ammonia lyase large subunit 2183698..2185080 Methylobacterium extorquens PA1 5833789 YP_001639423.1 CDS Mext_1953 NC_010172.1 2185077 2185871 D PFAM: Ethanolamine ammonia-lyase light chain; KEGG: xau:Xaut_4033 ethanolamine ammonia-lyase; ethanolamine ammonia-lyase 2185077..2185871 Methylobacterium extorquens PA1 5833790 YP_001639424.1 CDS Mext_1954 NC_010172.1 2186317 2188047 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2186317..2188047 Methylobacterium extorquens PA1 5833791 YP_001639425.1 CDS Mext_1955 NC_010172.1 2188034 2188921 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: rpa:RPA2862 putative exopolysaccharide regulatory protein ExoR; Sel1 domain-containing protein 2188034..2188921 Methylobacterium extorquens PA1 5831938 YP_001639426.1 CDS Mext_1956 NC_010172.1 2188953 2189747 R TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: smd:Smed_1154 exodeoxyribonuclease III Xth; exodeoxyribonuclease III Xth complement(2188953..2189747) Methylobacterium extorquens PA1 5831939 YP_001639427.1 CDS Mext_1957 NC_010172.1 2189908 2190567 D KEGG: pde:Pden_3125 hypothetical protein; hypothetical protein 2189908..2190567 Methylobacterium extorquens PA1 5831940 YP_001639428.1 CDS Mext_1958 NC_010172.1 2190659 2192590 R PFAM: AMP-dependent synthetase and ligase; KEGG: xau:Xaut_2464 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(2190659..2192590) Methylobacterium extorquens PA1 5831790 YP_001639429.1 CDS Mext_1959 NC_010172.1 2192807 2192983 R PFAM: protein of unknown function DUF465; KEGG: nwi:Nwi_1004 protein of unknown function DUF465; hypothetical protein complement(2192807..2192983) Methylobacterium extorquens PA1 5831791 YP_001639430.1 CDS Mext_1960 NC_010172.1 2193235 2193456 D PFAM: protein of unknown function DUF465; KEGG: nha:Nham_1238 protein of unknown function DUF465; hypothetical protein 2193235..2193456 Methylobacterium extorquens PA1 5831792 YP_001639431.1 CDS Mext_1961 NC_010172.1 2193684 2193860 R hypothetical protein complement(2193684..2193860) Methylobacterium extorquens PA1 5831793 YP_001639432.1 CDS Mext_1962 NC_010172.1 2194147 2194659 D KEGG: sme:SMc04001 probable phosphoribosylaminoimidazole carboxylase catalytic subunit protein; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 2194147..2194659 Methylobacterium extorquens PA1 5833666 YP_001639433.1 CDS Mext_1963 NC_010172.1 2194677 2195789 D KEGG: xau:Xaut_1255 phosphoribosylaminoimidazole carboxylase, ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylaminoimidazole carboxylase ATPase subunit 2194677..2195789 Methylobacterium extorquens PA1 5833667 YP_001639434.1 CDS Mext_1964 NC_010172.1 2196177 2197037 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: oan:Oant_1392 TPR repeat-containing protein; hypothetical protein 2196177..2197037 Methylobacterium extorquens PA1 5833668 YP_001639435.1 CDS Mext_1965 NC_010172.1 2197443 2197823 D PFAM: response regulator receiver; KEGG: rpa:RPA2074 response regulator receiver (CheY-like protein); response regulator receiver 2197443..2197823 Methylobacterium extorquens PA1 5833669 YP_001639436.1 CDS glpX NC_010172.1 2197894 2198889 R type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II complement(2197894..2198889) Methylobacterium extorquens PA1 5831072 YP_001639437.1 CDS Mext_1967 NC_010172.1 2199125 2200447 R catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase complement(2199125..2200447) Methylobacterium extorquens PA1 5831073 YP_001639438.1 CDS Mext_1968 NC_010172.1 2200814 2201113 D KEGG: nwi:Nwi_2478 hypothetical protein; hypothetical protein 2200814..2201113 Methylobacterium extorquens PA1 5831074 YP_001639439.1 CDS Mext_1969 NC_010172.1 2201276 2202259 R KEGG: xau:Xaut_0345 hypothetical protein; hypothetical protein complement(2201276..2202259) Methylobacterium extorquens PA1 5831075 YP_001639440.1 CDS Mext_1970 NC_010172.1 2202367 2202699 R KEGG: rpc:RPC_3841 hypothetical protein; hypothetical protein complement(2202367..2202699) Methylobacterium extorquens PA1 5831866 YP_001639441.1 CDS Mext_1971 NC_010172.1 2202775 2204025 R PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: bxe:Bxe_B0740 concentrative nucleoside/H+ symporter; Na+ dependent nucleoside transporter complement(2202775..2204025) Methylobacterium extorquens PA1 5831867 YP_001639442.1 CDS Mext_1972 NC_010172.1 2204135 2204785 R KEGG: xau:Xaut_1107 hypothetical protein; hypothetical protein complement(2204135..2204785) Methylobacterium extorquens PA1 5831868 YP_001639443.1 CDS Mext_1973 NC_010172.1 2204782 2205951 R PFAM: glycosyl transferase group 1; KEGG: sat:SYN_02667 alpha-D-QuiNAc alpha-1,3-galactosyltransferase; group 1 glycosyl transferase complement(2204782..2205951) Methylobacterium extorquens PA1 5831869 YP_001639444.1 CDS Mext_1974 NC_010172.1 2206017 2207219 D KEGG: nha:Nham_3998 putative DNA topoisomerase I; putative DNA topoisomerase I 2206017..2207219 Methylobacterium extorquens PA1 5833856 YP_001639445.1 CDS Mext_1975 NC_010172.1 2207239 2208333 R PFAM: chemotaxis sensory transducer; KEGG: rpb:RPB_0006 methyl-accepting chemotaxis sensory transducer; chemotaxis sensory transducer protein complement(2207239..2208333) Methylobacterium extorquens PA1 5833857 YP_001639446.1 CDS Mext_1976 NC_010172.1 2208644 2210059 D PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: aci:ACIAD1750 ubiquinol oxidase subunit I, cyanide insensitive; cytochrome bd ubiquinol oxidase subunit I 2208644..2210059 Methylobacterium extorquens PA1 5833858 YP_001639447.1 CDS Mext_1977 NC_010172.1 2210151 2210858 R PFAM: regulatory protein LuxR; KEGG: reh:H16_A3710 response regulator, NarL-family; regulatory protein LuxR complement(2210151..2210858) Methylobacterium extorquens PA1 5833859 YP_001639448.1 CDS Mext_1978 NC_010172.1 2211040 2211936 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: mmr:Mmar10_0119 diguanylate cyclase; diguanylate cyclase complement(2211040..2211936) Methylobacterium extorquens PA1 5831774 YP_001639449.1 CDS Mext_1979 NC_010172.1 2212043 2212489 R hypothetical protein complement(2212043..2212489) Methylobacterium extorquens PA1 5831775 YP_001639450.1 CDS Mext_1980 NC_010172.1 2212654 2212902 R hypothetical protein complement(2212654..2212902) Methylobacterium extorquens PA1 5831776 YP_001639451.1 CDS Mext_1981 NC_010172.1 2213356 2214186 D PFAM: iron permease FTR1; KEGG: rpc:RPC_2692 iron permease FTR1; iron permease FTR1 2213356..2214186 Methylobacterium extorquens PA1 5831777 YP_001639452.1 CDS Mext_1982 NC_010172.1 2214295 2214768 R PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: xau:Xaut_1233 protein tyrosine phosphatase; low molecular weight phosphotyrosine protein phosphatase complement(2214295..2214768) Methylobacterium extorquens PA1 5831370 YP_001639453.1 CDS Mext_1983 NC_010172.1 2215076 2215600 R PFAM: conserved hypothetical protein; KEGG: rpc:RPC_4416 uncharacterised conserved protein UCP032146; hypothetical protein complement(2215076..2215600) Methylobacterium extorquens PA1 5831371 YP_001639454.1 CDS Mext_1984 NC_010172.1 2215730 2217025 R PFAM: histidinol dehydrogenase; KEGG: nha:Nham_0286 histidinol dehydrogenase; histidinol dehydrogenase complement(2215730..2217025) Methylobacterium extorquens PA1 5831372 YP_001639455.1 CDS Mext_1985 NC_010172.1 2217057 2217515 R KEGG: mes:Meso_0191 hypothetical protein; hypothetical protein complement(2217057..2217515) Methylobacterium extorquens PA1 5832556 YP_001639456.1 CDS Mext_1986 NC_010172.1 2217813 2218193 D hypothetical protein 2217813..2218193 Methylobacterium extorquens PA1 5832557 YP_001639457.1 CDS Mext_1987 NC_010172.1 2218289 2219578 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(2218289..2219578) Methylobacterium extorquens PA1 5832558 YP_001639458.1 CDS Mext_1988 NC_010172.1 2219737 2220093 D hypothetical protein 2219737..2220093 Methylobacterium extorquens PA1 5832559 YP_001639459.1 CDS Mext_1989 NC_010172.1 2220508 2221896 D catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 2220508..2221896 Methylobacterium extorquens PA1 5833876 YP_001639460.1 CDS Mext_1990 NC_010172.1 2221936 2222142 D hypothetical protein 2221936..2222142 Methylobacterium extorquens PA1 5833877 YP_001639461.1 CDS Mext_1991 NC_010172.1 2222139 2222606 D KEGG: mbb:BCG_3106 hypothetical protein; hypothetical protein 2222139..2222606 Methylobacterium extorquens PA1 5833878 YP_001639462.1 CDS Mext_1992 NC_010172.1 2222613 2223167 R KEGG: xau:Xaut_3222 hypothetical protein; hypothetical protein complement(2222613..2223167) Methylobacterium extorquens PA1 5833879 YP_001639463.1 CDS Mext_1993 NC_010172.1 2223389 2223694 D PFAM: PhnA protein; KEGG: rle:pRL100320 putative polybetahydroxybutyrate synthesis PhnA protein; PhnA protein 2223389..2223694 Methylobacterium extorquens PA1 5831554 YP_001639464.1 CDS Mext_1994 NC_010172.1 2223717 2224448 R PFAM: beta-lactamase domain protein; KEGG: rpc:RPC_0754 beta-lactamase-like; beta-lactamase domain-containing protein complement(2223717..2224448) Methylobacterium extorquens PA1 5831555 YP_001639465.1 CDS Mext_1995 NC_010172.1 2224832 2225998 D PFAM: regulatory protein LuxR; KEGG: atc:AGR_C_3566 hypothetical protein; regulatory protein LuxR 2224832..2225998 Methylobacterium extorquens PA1 5831556 YP_001639466.1 CDS Mext_1996 NC_010172.1 2226136 2227518 D KEGG: xau:Xaut_3227 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II; phospho-2-dehydro-3-deoxyheptonate aldolase 2226136..2227518 Methylobacterium extorquens PA1 5831557 YP_001639467.1 CDS Mext_1997 NC_010172.1 2227718 2227954 D hypothetical protein 2227718..2227954 Methylobacterium extorquens PA1 5831914 YP_001639468.1 CDS Mext_1998 NC_010172.1 2228032 2228577 R hypothetical protein complement(2228032..2228577) Methylobacterium extorquens PA1 5831915 YP_001639469.1 CDS Mext_1999 NC_010172.1 2228909 2229823 D PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: pla:Plav_3355 domain of unknown function DUF1732; hypothetical protein 2228909..2229823 Methylobacterium extorquens PA1 5831916 YP_001639470.1 CDS gmk NC_010172.1 2229858 2230529 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 2229858..2230529 Methylobacterium extorquens PA1 5831917 YP_001639471.1 CDS Mext_2001 NC_010172.1 2230576 2232324 R PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_4405 ABC transporter related; ABC transporter-like protein complement(2230576..2232324) Methylobacterium extorquens PA1 5832183 YP_001639472.1 CDS Mext_2002 NC_010172.1 2232496 2233011 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_0060 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein complement(2232496..2233011) Methylobacterium extorquens PA1 5832184 YP_001639473.1 CDS Mext_2003 NC_010172.1 2233200 2233865 R KEGG: rpd:RPD_0641 Cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; cob(II)yrinic acid a,c-diamide reductase complement(2233200..2233865) Methylobacterium extorquens PA1 5832185 YP_001639474.1 CDS Mext_2004 NC_010172.1 2234379 2234774 D KEGG: xau:Xaut_3850 hypothetical protein; hypothetical protein 2234379..2234774 Methylobacterium extorquens PA1 5832186 YP_001639475.1 CDS Mext_2005 NC_010172.1 2234813 2236987 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_3292 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(2234813..2236987) Methylobacterium extorquens PA1 5832845 YP_001639476.1 CDS Mext_2006 NC_010172.1 2237493 2238113 R KEGG: eli:ELI_00530 KDPG aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase complement(2237493..2238113) Methylobacterium extorquens PA1 5832846 YP_001639477.1 CDS Mext_2007 NC_010172.1 2238166 2239995 R catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase complement(2238166..2239995) Methylobacterium extorquens PA1 5832847 YP_001639478.1 CDS hslO NC_010172.1 2240345 2241352 R becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin complement(2240345..2241352) Methylobacterium extorquens PA1 5831204 YP_001639479.1 CDS Mext_2010 NC_010172.1 2241611 2243722 R PFAM: Carbohydrate-selective porin OprB; KEGG: bbt:BBta_7453 OmpA-like transmembrane domain; carbohydrate-selective porin OprB complement(2241611..2243722) Methylobacterium extorquens PA1 5831205 YP_001639480.1 CDS Mext_2011 NC_010172.1 2244080 2244592 R KEGG: bja:blr1215 hypothetical protein; hypothetical protein complement(2244080..2244592) Methylobacterium extorquens PA1 5831206 YP_001639481.1 CDS ndk NC_010172.1 2244970 2245392 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 2244970..2245392 Methylobacterium extorquens PA1 5831525 YP_001639482.1 CDS Mext_2013 NC_010172.1 2245574 2245954 D hypothetical protein 2245574..2245954 Methylobacterium extorquens PA1 5831526 YP_001639483.1 CDS Mext_2014 NC_010172.1 2246053 2247189 R PFAM: peptidase M48 Ste24p; KEGG: rpd:RPD_3691 peptidase M48, Ste24p; peptidase M48 Ste24p complement(2246053..2247189) Methylobacterium extorquens PA1 5831527 YP_001639484.1 CDS Mext_2015 NC_010172.1 2247197 2248486 R KEGG: rpe:RPE_4304 hypothetical protein; hypothetical protein complement(2247197..2248486) Methylobacterium extorquens PA1 5831528 YP_001639485.1 CDS Mext_2016 NC_010172.1 2248875 2249108 R PFAM: protein of unknown function DUF466; KEGG: bcn:Bcen_5299 protein of unknown function DUF466; hypothetical protein complement(2248875..2249108) Methylobacterium extorquens PA1 5831032 YP_001639486.1 CDS Mext_2017 NC_010172.1 2249116 2251173 R PFAM: carbon starvation protein CstA; KEGG: bur:Bcep18194_B0097 carbon starvation protein CstA; carbon starvation protein CstA complement(2249116..2251173) Methylobacterium extorquens PA1 5831033 YP_001639487.1 CDS Mext_2018 NC_010172.1 2251473 2252099 R PFAM: protein of unknown function DUF477; KEGG: bov:BOV_1752 hypothetical protein; hypothetical protein complement(2251473..2252099) Methylobacterium extorquens PA1 5831034 YP_001639488.1 CDS Mext_2019 NC_010172.1 2252089 2252874 R PFAM: protein of unknown function DUF477; KEGG: swi:Swit_3453 protein of unknown function DUF477; hypothetical protein complement(2252089..2252874) Methylobacterium extorquens PA1 5831035 YP_001639489.1 CDS Mext_2020 NC_010172.1 2252894 2253529 R PFAM: LemA family protein; KEGG: pfo:Pfl_1298 LemA; LemA family protein complement(2252894..2253529) Methylobacterium extorquens PA1 5833492 YP_001639490.1 CDS Mext_2021 NC_010172.1 2253774 2254088 D TIGRFAM: conserved hypothetical selenoprotein; PFAM: Selenoprotein W-related; KEGG: pen:PSEEN3919 hypothetical protein; putative selenoprotein 2253774..2254088 Methylobacterium extorquens PA1 5833493 YP_001639491.1 CDS Mext_2022 NC_010172.1 2254176 2256329 D KEGG: mlo:mll9598 histidine protein kinase; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS sensor protein 2254176..2256329 Methylobacterium extorquens PA1 5833494 YP_001639492.1 CDS Mext_2023 NC_010172.1 2256361 2257197 R PFAM: aldo/keto reductase; KEGG: rso:RSc1500 putative oxidoreductase protein; 2,5-didehydrogluconate reductase complement(2256361..2257197) Methylobacterium extorquens PA1 5833495 YP_001639493.1 CDS Mext_2024 NC_010172.1 2257312 2258091 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bra:BRADO3435 putative transcriptional regulatory protein, Crp/Fnr family; cyclic nucleotide-binding protein complement(2257312..2258091) Methylobacterium extorquens PA1 5831786 YP_001639494.1 CDS glgA NC_010172.1 2258387 2259985 R catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase complement(2258387..2259985) Methylobacterium extorquens PA1 5831787 YP_001639495.1 CDS Mext_2028 NC_010172.1 2262132 2264666 D KEGG: pen:PSEEN5107 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 2262132..2264666 Methylobacterium extorquens PA1 5831789 YP_001639496.1 CDS Mext_2029 NC_010172.1 2264908 2265255 D hypothetical protein 2264908..2265255 Methylobacterium extorquens PA1 5834984 YP_001639497.1 CDS Mext_2030 NC_010172.1 2265275 2266216 R KEGG: bja:blr7998 putative ferredoxin-NAD reductase component; putative ferredoxin-NAD reductase component complement(2265275..2266216) Methylobacterium extorquens PA1 5834985 YP_001639498.1 CDS Mext_2031 NC_010172.1 2266260 2266688 R hypothetical protein complement(2266260..2266688) Methylobacterium extorquens PA1 5834986 YP_001639499.1 CDS Mext_2032 NC_010172.1 2266809 2269739 R KEGG: rpa:RPA0914 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; diguanylate cyclase complement(2266809..2269739) Methylobacterium extorquens PA1 5834987 YP_001639500.1 CDS Mext_2033 NC_010172.1 2270040 2271071 D PFAM: glycosyl transferase family 4; KEGG: rpa:RPA3982 glycosyl transferase, family 4; glycosyl transferase family protein 2270040..2271071 Methylobacterium extorquens PA1 5834916 YP_001639501.1 CDS Mext_2034 NC_010172.1 2271083 2272006 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: bmn:BMA10247_1840 NAD-dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 2271083..2272006 Methylobacterium extorquens PA1 5834917 YP_001639502.1 CDS Mext_2035 NC_010172.1 2272011 2272622 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: bja:blr5106 acyl-carrier-protein phosphodiesterase; NAD(P)H dehydrogenase (quinone) complement(2272011..2272622) Methylobacterium extorquens PA1 5834918 YP_001639503.1 CDS Mext_2036 NC_010172.1 2272699 2273106 D PFAM: helix-turn-helix HxlR type; KEGG: bja:bll5105 transcriptional regulatory protein; helix-turn-helix HxlR type protein 2272699..2273106 Methylobacterium extorquens PA1 5834919 YP_001639504.1 CDS Mext_2037 NC_010172.1 2273126 2275153 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KR domain protein; KEGG: rpd:RPD_1616 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD complement(2273126..2275153) Methylobacterium extorquens PA1 5834748 YP_001639505.1 CDS Mext_2038 NC_010172.1 2275203 2276054 R PFAM: protein of unknown function DUF1206; KEGG: rxy:Rxyl_0683 protein of unknown function DUF1206; hypothetical protein complement(2275203..2276054) Methylobacterium extorquens PA1 5834749 YP_001639506.1 CDS Mext_2039 NC_010172.1 2276061 2276402 R hypothetical protein complement(2276061..2276402) Methylobacterium extorquens PA1 5834750 YP_001639507.1 CDS Mext_2040 NC_010172.1 2276428 2276994 R PFAM: protein of unknown function DUF820; KEGG: hha:Hhal_1924 protein of unknown function DUF820; hypothetical protein complement(2276428..2276994) Methylobacterium extorquens PA1 5835702 YP_001639508.1 CDS Mext_2041 NC_010172.1 2277066 2277626 R PFAM: protein of unknown function DUF820; KEGG: ttj:TTHA1553 hypothetical protein; hypothetical protein complement(2277066..2277626) Methylobacterium extorquens PA1 5835703 YP_001639509.1 CDS Mext_2042 NC_010172.1 2277714 2279162 R PFAM: homospermidine synthase; KEGG: bra:BRADO6264 homospermidine synthase; homospermidine synthase complement(2277714..2279162) Methylobacterium extorquens PA1 5835704 YP_001639510.1 CDS Mext_2043 NC_010172.1 2279436 2279624 D hypothetical protein 2279436..2279624 Methylobacterium extorquens PA1 5835705 YP_001639511.1 CDS Mext_2044 NC_010172.1 2279772 2280413 R PFAM: GCN5-related N-acetyltransferase; KEGG: rpd:RPD_0855 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2279772..2280413) Methylobacterium extorquens PA1 5834773 YP_001639512.1 CDS Mext_2045 NC_010172.1 2280508 2281674 R PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bja:blr7759 ornithine decarboxylase; Orn/DAP/Arg decarboxylase 2 complement(2280508..2281674) Methylobacterium extorquens PA1 5834774 YP_001639513.1 CDS mdoG NC_010172.1 2282359 2283978 D involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 2282359..2283978 Methylobacterium extorquens PA1 5834775 YP_001639514.1 CDS Mext_2047 NC_010172.1 2283975 2284487 D PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mlr7776 hypothetical protein; N-acetyltransferase GCN5 2283975..2284487 Methylobacterium extorquens PA1 5834776 YP_001639515.1 CDS Mext_2048 NC_010172.1 2284457 2285719 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gox:GOX0502 putative oxidoreductase; NADH:flavin oxidoreductase 2284457..2285719 Methylobacterium extorquens PA1 5834453 YP_001639516.1 CDS Mext_2049 NC_010172.1 2285841 2286512 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bra:BRADO4011 putative phosphoglycolate phosphatase; putative haloacid dehalogenase-like hydrolase; HAD family hydrolase 2285841..2286512 Methylobacterium extorquens PA1 5834454 YP_001639517.1 CDS Mext_2050 NC_010172.1 2286506 2287003 R PFAM: SmpA/OmlA domain protein; KEGG: rpa:RPA2737 hypothetical protein; SmpA/OmlA domain-containing protein complement(2286506..2287003) Methylobacterium extorquens PA1 5834455 YP_001639518.1 CDS Mext_2051 NC_010172.1 2287161 2287727 D KEGG: mes:Meso_1143 ubiquinol-cytochrome c chaperone; ubiquinol-cytochrome c chaperone 2287161..2287727 Methylobacterium extorquens PA1 5834456 YP_001639519.1 CDS Mext_2052 NC_010172.1 2287724 2288242 D KEGG: xau:Xaut_4383 hypothetical protein; hypothetical protein 2287724..2288242 Methylobacterium extorquens PA1 5834562 YP_001639520.1 CDS Mext_2053 NC_010172.1 2288407 2289465 D TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: xau:Xaut_4384 fatty acid/phospholipid synthesis protein PlsX; fatty acid/phospholipid synthesis protein PlsX 2288407..2289465 Methylobacterium extorquens PA1 5834563 YP_001639521.1 CDS Mext_2054 NC_010172.1 2289499 2290479 D KEGG: rpb:RPB_2650 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 2289499..2290479 Methylobacterium extorquens PA1 5834564 YP_001639522.1 CDS Mext_2055 NC_010172.1 2290688 2291014 D PFAM: histone family protein DNA-binding protein; KEGG: xau:Xaut_4386 integration host factor, alpha subunit; histone family protein DNA-binding protein 2290688..2291014 Methylobacterium extorquens PA1 5834565 YP_001639523.1 CDS Mext_2056 NC_010172.1 2291068 2291565 D PFAM: regulatory protein MerR; KEGG: rpc:RPC_2678 transcriptional regulator, MerR family; regulatory protein MerR 2291068..2291565 Methylobacterium extorquens PA1 5832663 YP_001639524.1 CDS Mext_2057 NC_010172.1 2291707 2292126 D hypothetical protein 2291707..2292126 Methylobacterium extorquens PA1 5832664 YP_001639525.1 CDS Mext_2058 NC_010172.1 2292268 2292741 D KEGG: rpb:RPB_2247 hypothetical protein; hypothetical protein 2292268..2292741 Methylobacterium extorquens PA1 5832665 YP_001639526.1 CDS Mext_2059 NC_010172.1 2293001 2294953 D PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: bra:BRADO5807 conserved hypothetical protein (YeaG); putative Ser protein kinase; serine protein kinase domain-containing protein 2293001..2294953 Methylobacterium extorquens PA1 5832666 YP_001639527.1 CDS Mext_2060 NC_010172.1 2295057 2296361 D PFAM: protein of unknown function DUF444; KEGG: bja:bll6755 hypothetical protein; hypothetical protein 2295057..2296361 Methylobacterium extorquens PA1 5834837 YP_001639528.1 CDS Mext_2061 NC_010172.1 2296409 2297980 D PFAM: SpoVR family protein; KEGG: bja:bll6754 hypothetical protein; SpoVR family protein 2296409..2297980 Methylobacterium extorquens PA1 5834838 YP_001639529.1 CDS Mext_2062 NC_010172.1 2298157 2298816 R TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: mes:Meso_1967 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase complement(2298157..2298816) Methylobacterium extorquens PA1 5834839 YP_001639530.1 CDS Mext_2063 NC_010172.1 2298813 2299880 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(2298813..2299880) Methylobacterium extorquens PA1 5834840 YP_001639531.1 CDS Mext_2064 NC_010172.1 2299877 2300125 R hypothetical protein complement(2299877..2300125) Methylobacterium extorquens PA1 5831754 YP_001639532.1 CDS Mext_2065 NC_010172.1 2300226 2301338 D PFAM: protein of unknown function UPF0118; KEGG: oan:Oant_2575 protein of unknown function UPF0118; hypothetical protein 2300226..2301338 Methylobacterium extorquens PA1 5831755 YP_001639533.1 CDS Mext_2066 NC_010172.1 2301403 2302161 D KEGG: pla:Plav_3328 chromosomal replication initiator DnaA; chromosomal replication initiator DnaA 2301403..2302161 Methylobacterium extorquens PA1 5831756 YP_001639534.1 CDS Mext_2067 NC_010172.1 2302301 2304667 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 2302301..2304667 Methylobacterium extorquens PA1 5831757 YP_001639535.1 CDS Mext_2068 NC_010172.1 2304785 2306338 D PFAM: Ppx/GppA phosphatase; KEGG: xau:Xaut_3126 Ppx/GppA phosphatase; Ppx/GppA phosphatase 2304785..2306338 Methylobacterium extorquens PA1 5835022 YP_001639536.1 CDS Mext_2069 NC_010172.1 2306417 2306716 R hypothetical protein complement(2306417..2306716) Methylobacterium extorquens PA1 5835023 YP_001639537.1 CDS Mext_2070 NC_010172.1 2307247 2308449 R PFAM: aminotransferase class I and II; KEGG: rle:RL3443 putative aspartate aminotransferase; class I and II aminotransferase complement(2307247..2308449) Methylobacterium extorquens PA1 5835024 YP_001639538.1 CDS Mext_2071 NC_010172.1 2308890 2310872 D PFAM: coenzyme A transferase; KEGG: bja:bll0888 hypothetical protein; coenzyme A transferase 2308890..2310872 Methylobacterium extorquens PA1 5835025 YP_001639539.1 CDS Mext_2072 NC_010172.1 2311246 2312916 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bra:BRADO6566 putative methyl-accepting chemotaxis protein; chemotaxis sensory transducer protein 2311246..2312916 Methylobacterium extorquens PA1 5832415 YP_001639540.1 CDS rpsB NC_010172.1 2313303 2314370 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 2313303..2314370 Methylobacterium extorquens PA1 5832416 YP_001639541.1 CDS tsf NC_010172.1 2314515 2315435 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 2314515..2315435 Methylobacterium extorquens PA1 5832417 YP_001639542.1 CDS Mext_2075 NC_010172.1 2315602 2316324 D TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: xau:Xaut_4437 uridylate kinase; uridylate kinase 2315602..2316324 Methylobacterium extorquens PA1 5832418 YP_001639543.1 CDS Mext_2076 NC_010172.1 2316434 2316973 R catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase complement(2316434..2316973) Methylobacterium extorquens PA1 5833387 YP_001639544.1 CDS Mext_2077 NC_010172.1 2317248 2317754 R PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA0410 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2317248..2317754) Methylobacterium extorquens PA1 5833388 YP_001639545.1 CDS Mext_2078 NC_010172.1 2317892 2318617 D KEGG: ccr:CC_0306 hypothetical protein; hypothetical protein 2317892..2318617 Methylobacterium extorquens PA1 5833389 YP_001639546.1 CDS Mext_2079 NC_010172.1 2318626 2319621 D KEGG: bte:BTH_I2812 hypothetical protein; hypothetical protein 2318626..2319621 Methylobacterium extorquens PA1 5833390 YP_001639547.1 CDS lpxD NC_010172.1 2319682 2320737 R adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(2319682..2320737) Methylobacterium extorquens PA1 5832790 YP_001639548.1 CDS Mext_2081 NC_010172.1 2320910 2323504 R TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: xau:Xaut_4431 surface antigen (D15); outer membrane protein assembly complex, YaeT protein complement(2320910..2323504) Methylobacterium extorquens PA1 5832791 YP_001639549.1 CDS Mext_2082 NC_010172.1 2323835 2324995 R KEGG: xau:Xaut_4432 putative membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease complement(2323835..2324995) Methylobacterium extorquens PA1 5832792 YP_001639550.1 CDS Mext_2083 NC_010172.1 2325212 2326390 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(2325212..2326390) Methylobacterium extorquens PA1 5832793 YP_001639551.1 CDS Mext_2084 NC_010172.1 2326405 2327265 R PFAM: phosphatidate cytidylyltransferase; KEGG: xau:Xaut_4434 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(2326405..2327265) Methylobacterium extorquens PA1 5831805 YP_001639552.1 CDS Mext_2085 NC_010172.1 2327265 2328044 R KEGG: xau:Xaut_4435 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase complement(2327265..2328044) Methylobacterium extorquens PA1 5831806 YP_001639553.1 CDS frr NC_010172.1 2328115 2328678 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(2328115..2328678) Methylobacterium extorquens PA1 5831807 YP_001639554.1 CDS Mext_2087 NC_010172.1 2329011 2330150 D PFAM: CBS domain containing protein; HPP family protein?; KEGG: rle:pRL120639 putative transmembrane protein; HPP family protein 2329011..2330150 Methylobacterium extorquens PA1 5831808 YP_001639555.1 CDS Mext_2088 NC_010172.1 2330487 2331767 R TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: rpb:RPB_0369 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase complement(2330487..2331767) Methylobacterium extorquens PA1 5833174 YP_001639556.1 CDS Mext_2089 NC_010172.1 2332160 2333104 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bja:bll2166 transcriptional regulatory protein; LysR substrate-binding protein 2332160..2333104 Methylobacterium extorquens PA1 5833175 YP_001639557.1 CDS Mext_2090 NC_010172.1 2333350 2334099 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_B4775 NAD-dependent epimerase/dehydratase:short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2333350..2334099 Methylobacterium extorquens PA1 5833176 YP_001639558.1 CDS Mext_2091 NC_010172.1 2334117 2334977 D PFAM: Transketolase domain protein; KEGG: acr:Acry_0717 transketolase domain protein; transketolase domain-containing protein 2334117..2334977 Methylobacterium extorquens PA1 5833177 YP_001639559.1 CDS Mext_2092 NC_010172.1 2334974 2335993 D PFAM: Transketolase central region; Transketolase domain protein; KEGG: acr:Acry_0718 transketolase, central region; transketolase central region 2334974..2335993 Methylobacterium extorquens PA1 5833182 YP_001639560.1 CDS Mext_2093 NC_010172.1 2336156 2337172 D TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bja:blr2170 probable ABC transporter substrate-binding protein; TRAP dicarboxylate transporter subunit DctP 2336156..2337172 Methylobacterium extorquens PA1 5833183 YP_001639561.1 CDS Mext_2094 NC_010172.1 2337184 2339070 D PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpd:RPD_2721 TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP C4-dicarboxylate transport system permease DctM 2337184..2339070 Methylobacterium extorquens PA1 5833184 YP_001639562.1 CDS Mext_2095 NC_010172.1 2339752 2340663 D KEGG: xau:Xaut_4179 hypothetical protein; hypothetical protein 2339752..2340663 Methylobacterium extorquens PA1 5833185 YP_001639563.1 CDS Mext_2097 NC_010172.1 2349677 2350540 D KEGG: mes:Meso_3238 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase II 2349677..2350540 Methylobacterium extorquens PA1 5831154 YP_001639564.1 CDS Mext_2098 NC_010172.1 2350803 2351141 D PFAM: nitrogen regulatory protein P-II; KEGG: xau:Xaut_2209 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 2350803..2351141 Methylobacterium extorquens PA1 5831155 YP_001639565.1 CDS Mext_2099 NC_010172.1 2351274 2352770 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: bra:BRADO0305 ammonium transport protein (Amt family); ammonium transporter 2351274..2352770 Methylobacterium extorquens PA1 5831156 YP_001639566.1 CDS Mext_2100 NC_010172.1 2353112 2354374 D KEGG: acr:Acry_3492 hypothetical protein; hypothetical protein 2353112..2354374 Methylobacterium extorquens PA1 5833207 YP_001639567.1 CDS Mext_2101 NC_010172.1 2354556 2357171 D PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: rpa:RPA0279 possible FtsK/SpoIIIE family; cell division protein FtsK 2354556..2357171 Methylobacterium extorquens PA1 5833208 YP_001639568.1 CDS Mext_2102 NC_010172.1 2357322 2359481 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bbt:BBta_2266 putative outer membrane hemin/siderophore receptor protein; TonB-dependent receptor plug 2357322..2359481 Methylobacterium extorquens PA1 5833209 YP_001639569.1 CDS Mext_2103 NC_010172.1 2359837 2361804 D KEGG: xcb:XC_3757 methyltransferase; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein 2359837..2361804 Methylobacterium extorquens PA1 5833210 YP_001639570.1 CDS Mext_2104 NC_010172.1 2361927 2362229 R KEGG: bov:BOV_A0860 hypothetical protein; hypothetical protein complement(2361927..2362229) Methylobacterium extorquens PA1 5831460 YP_001639571.1 CDS Mext_2105 NC_010172.1 2362247 2364565 R TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: oan:Oant_1449 oxidoreductase alpha (molybdopterin) subunit; oxidoreductase alpha (molybdopterin) subunit complement(2362247..2364565) Methylobacterium extorquens PA1 5831461 YP_001639572.1 CDS Mext_2106 NC_010172.1 2365089 2366165 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(2365089..2366165) Methylobacterium extorquens PA1 5831462 YP_001639573.1 CDS Mext_2107 NC_010172.1 2366162 2366512 R PFAM: protein of unknown function DUF952; KEGG: xau:Xaut_1468 protein of unknown function DUF952; hypothetical protein complement(2366162..2366512) Methylobacterium extorquens PA1 5831463 YP_001639574.1 CDS Mext_2108 NC_010172.1 2366736 2367368 D PFAM: peptidase S24 and S26 domain protein; KEGG: rpe:RPE_0719 putative phage repressor; peptidase S24/S26 domain-containing protein 2366736..2367368 Methylobacterium extorquens PA1 5834641 YP_001639575.1 CDS Mext_2109 NC_010172.1 2367380 2367709 R KEGG: nha:Nham_2576 hypothetical protein; hypothetical protein complement(2367380..2367709) Methylobacterium extorquens PA1 5834642 YP_001639576.1 CDS Mext_2110 NC_010172.1 2367880 2368095 R KEGG: nwi:Nwi_2175 hypothetical protein; hypothetical protein complement(2367880..2368095) Methylobacterium extorquens PA1 5834643 YP_001639577.1 CDS Mext_2111 NC_010172.1 2368231 2369091 R KEGG: rpa:RPA3429 serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein; serine O-acetyltransferase complement(2368231..2369091) Methylobacterium extorquens PA1 5834644 YP_001639578.1 CDS Mext_2112 NC_010172.1 2369372 2370271 R consists of N-terminal helix-turn-helix domain and C-terminal shikimate kinase-like domain which may bind benzoyl-CoA; controls inducible expression of the bzd catabolic operon that is involved in the anaerobic catabolism of benzoate; anaerobic benzoate catabolism transcriptional regulator complement(2369372..2370271) Methylobacterium extorquens PA1 5831508 YP_001639579.1 CDS Mext_2113 NC_010172.1 2370935 2373208 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rru:Rru_A0438 multi-sensor signal transduction histidine kinase; ATPase domain-containing protein complement(2370935..2373208) Methylobacterium extorquens PA1 5831509 YP_001639580.1 CDS Mext_2114 NC_010172.1 2373330 2373533 R hypothetical protein complement(2373330..2373533) Methylobacterium extorquens PA1 5831510 YP_001639581.1 CDS Mext_2115 NC_010172.1 2373545 2373811 R hypothetical protein complement(2373545..2373811) Methylobacterium extorquens PA1 5831511 YP_001639582.1 CDS Mext_2116 NC_010172.1 2373985 2374719 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpa:RPA4791 two-component transcriptional regulator, winged helix family; response regulator receiver complement(2373985..2374719) Methylobacterium extorquens PA1 5833188 YP_001639583.1 CDS Mext_2117 NC_010172.1 2375020 2376915 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bbt:BBta_0711 two-component system regulator; histidine kinase 2375020..2376915 Methylobacterium extorquens PA1 5833189 YP_001639584.1 CDS Mext_2118 NC_010172.1 2377002 2377385 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: psa:PST_0059 putative lyase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2377002..2377385) Methylobacterium extorquens PA1 5833190 YP_001639585.1 CDS Mext_2119 NC_010172.1 2377539 2377811 R KEGG: rle:pRL120138 putative CobW family cobalimin synthesis protein; CobW family cobalimin synthesis protein complement(2377539..2377811) Methylobacterium extorquens PA1 5833191 YP_001639586.1 CDS Mext_2120 NC_010172.1 2377909 2378640 R PFAM: cyclic nucleotide-binding; KEGG: mlo:mlr2110 hypothetical protein; cyclic nucleotide-binding protein complement(2377909..2378640) Methylobacterium extorquens PA1 5831862 YP_001639587.1 CDS Mext_2121 NC_010172.1 2378824 2380035 R PFAM: PepSY-associated TM helix domain protein; KEGG: bbt:BBta_6053 putative membrane protein of unknown function with 4 PepSY-associated TM helix domain; PepSY-associated TM helix domain-containing protein complement(2378824..2380035) Methylobacterium extorquens PA1 5831863 YP_001639588.1 CDS Mext_2122 NC_010172.1 2380090 2382270 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcc:XCC4162 ferrichrome-iron receptor 3; TonB-dependent siderophore receptor complement(2380090..2382270) Methylobacterium extorquens PA1 5831864 YP_001639589.1 CDS Mext_2123 NC_010172.1 2382615 2383115 D KEGG: bra:BRADO6323 hypothetical protein; hypothetical protein 2382615..2383115 Methylobacterium extorquens PA1 5831865 YP_001639590.1 CDS Mext_2124 NC_010172.1 2383342 2383947 D PFAM: oxidoreductase molybdopterin binding; KEGG: sal:Sala_0108 oxidoreductase, molybdopterin binding; molybdopterin binding oxidoreductase 2383342..2383947 Methylobacterium extorquens PA1 5831832 YP_001639591.1 CDS Mext_2125 NC_010172.1 2383961 2384692 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: afw:Anae109_1054 oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding subunit 2383961..2384692 Methylobacterium extorquens PA1 5831833 YP_001639592.1 CDS Mext_2126 NC_010172.1 2384873 2385250 R PFAM: conserved hypothetical protein; KEGG: mes:Meso_3610 hypothetical protein; hypothetical protein complement(2384873..2385250) Methylobacterium extorquens PA1 5831834 YP_001639593.1 CDS Mext_2127 NC_010172.1 2385428 2385739 D hypothetical protein 2385428..2385739 Methylobacterium extorquens PA1 5831835 YP_001639594.1 CDS Mext_2128 NC_010172.1 2386021 2387439 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 2386021..2387439 Methylobacterium extorquens PA1 5833763 YP_001639595.1 CDS Mext_2129 NC_010172.1 2387436 2388104 D KEGG: xau:Xaut_1111 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase 2387436..2388104 Methylobacterium extorquens PA1 5833764 YP_001639596.1 CDS Mext_2130 NC_010172.1 2388124 2388441 R PFAM: protein of unknown function DUF167; KEGG: ret:RHE_CH03912 hypothetical protein; hypothetical protein complement(2388124..2388441) Methylobacterium extorquens PA1 5833765 YP_001639597.1 CDS Mext_2131 NC_010172.1 2389244 2390542 D KEGG: bms:BRA0256 hypothetical protein; hypothetical protein 2389244..2390542 Methylobacterium extorquens PA1 5831087 YP_001639598.1 CDS Mext_2132 NC_010172.1 2390579 2391841 D PFAM: glycosyl transferase family 28; KEGG: pol:Bpro_4922 glycosyl transferase, family 28; glycosyl transferase family protein 2390579..2391841 Methylobacterium extorquens PA1 5831088 YP_001639599.1 CDS Mext_2133 NC_010172.1 2391848 2392624 R PFAM: Creatininase; KEGG: rpb:RPB_0569 creatininase; creatininase complement(2391848..2392624) Methylobacterium extorquens PA1 5831089 YP_001639600.1 CDS Mext_2134 NC_010172.1 2392773 2393714 D KEGG: aav:Aave_3523 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; diguanylate cyclase 2392773..2393714 Methylobacterium extorquens PA1 5831240 YP_001639601.1 CDS Mext_2135 NC_010172.1 2393698 2394114 R KEGG: mpa:MAP1775 hypothetical protein; hypothetical protein complement(2393698..2394114) Methylobacterium extorquens PA1 5831241 YP_001639602.1 CDS Mext_2136 NC_010172.1 2394243 2394446 R PFAM: CsbD family protein; KEGG: nha:Nham_1079 CsbD-like; CsbD family protein complement(2394243..2394446) Methylobacterium extorquens PA1 5831242 YP_001639603.1 CDS Mext_2137 NC_010172.1 2394751 2396061 D PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_B1702 oxalate / formate antiporter, MFS-type, OFA family; major facilitator transporter 2394751..2396061 Methylobacterium extorquens PA1 5831243 YP_001639604.1 CDS Mext_2138 NC_010172.1 2396067 2396837 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rpb:RPB_3432 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 2396067..2396837 Methylobacterium extorquens PA1 5831055 YP_001639605.1 CDS Mext_2139 NC_010172.1 2396943 2397950 D KEGG: mpt:Mpe_A2226 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 2396943..2397950 Methylobacterium extorquens PA1 5831056 YP_001639606.1 CDS Mext_2140 NC_010172.1 2397953 2399533 D PFAM: AMP-dependent synthetase and ligase; KEGG: mpt:Mpe_A2230 coenzyme A synthetase-like protein; AMP-dependent synthetase and ligase 2397953..2399533 Methylobacterium extorquens PA1 5831057 YP_001639607.1 CDS Mext_2141 NC_010172.1 2400100 2400381 R hypothetical protein complement(2400100..2400381) Methylobacterium extorquens PA1 5831058 YP_001639608.1 CDS Mext_2142 NC_010172.1 2400382 2400636 R hypothetical protein complement(2400382..2400636) Methylobacterium extorquens PA1 5831934 YP_001639609.1 CDS Mext_2143 NC_010172.1 2400752 2401117 R KEGG: bja:bll6799 hypothetical protein; hypothetical protein complement(2400752..2401117) Methylobacterium extorquens PA1 5831935 YP_001639610.1 CDS Mext_2144 NC_010172.1 2401248 2402450 R PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr0485 hypothetical protein; major facilitator transporter complement(2401248..2402450) Methylobacterium extorquens PA1 5831936 YP_001639611.1 CDS Mext_2145 NC_010172.1 2402568 2403470 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB1011 LysR-family transcriptional regulator; LysR substrate-binding protein 2402568..2403470 Methylobacterium extorquens PA1 5831937 YP_001639612.1 CDS Mext_2146 NC_010172.1 2403454 2403843 R PFAM: 4-oxalocrotonate tautomerase; KEGG: gox:GOX0497 hypothetical protein; 4-oxalocrotonate tautomerase complement(2403454..2403843) Methylobacterium extorquens PA1 5835614 YP_001639613.1 CDS Mext_2147 NC_010172.1 2404101 2404991 D PFAM: HpcH/HpaI aldolase; KEGG: xau:Xaut_1974 citryl-CoA lyase; citrate (pro-3S)-lyase 2404101..2404991 Methylobacterium extorquens PA1 5835615 YP_001639614.1 CDS Mext_2148 NC_010172.1 2405061 2405477 R KEGG: rpb:RPB_3274 hypothetical protein; hypothetical protein complement(2405061..2405477) Methylobacterium extorquens PA1 5835616 YP_001639615.1 CDS Mext_2149 NC_010172.1 2405676 2406350 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bra:BRADO3430 putative haloacid dehalogenase-like hydrolase family protein; HAD family hydrolase complement(2405676..2406350) Methylobacterium extorquens PA1 5835617 YP_001639616.1 CDS Mext_2150 NC_010172.1 2406395 2407915 D KEGG: mmw:Mmwyl1_2221 hypothetical protein; hypothetical protein 2406395..2407915 Methylobacterium extorquens PA1 5834769 YP_001639617.1 CDS Mext_2151 NC_010172.1 2407928 2408563 D KEGG: bja:blr1665 hypothetical protein; hypothetical protein 2407928..2408563 Methylobacterium extorquens PA1 5834770 YP_001639618.1 CDS Mext_2152 NC_010172.1 2408662 2409603 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: acr:Acry_1284 transcriptional regulator, LysR family; LysR substrate-binding protein complement(2408662..2409603) Methylobacterium extorquens PA1 5834771 YP_001639619.1 CDS Mext_2153 NC_010172.1 2409738 2410667 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsh:Rsph17029_3780 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2409738..2410667 Methylobacterium extorquens PA1 5834772 YP_001639620.1 CDS Mext_2154 NC_010172.1 2410744 2411373 D PFAM: phospholipase/Carboxylesterase; KEGG: rsh:Rsph17029_3781 phospholipase/carboxylesterase; phospholipase/carboxylesterase 2410744..2411373 Methylobacterium extorquens PA1 5833942 YP_001639621.1 CDS Mext_2155 NC_010172.1 2411956 2412183 D hypothetical protein 2411956..2412183 Methylobacterium extorquens PA1 5833943 YP_001639622.1 CDS Mext_2156 NC_010172.1 2412732 2416211 D KEGG: bja:blr1666 hypothetical protein; hypothetical protein 2412732..2416211 Methylobacterium extorquens PA1 5833944 YP_001639623.1 CDS rpsL NC_010172.1 2416600 2416971 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 2416600..2416971 Methylobacterium extorquens PA1 5833945 YP_001639624.1 CDS Mext_2158 NC_010172.1 2417078 2417548 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 2417078..2417548 Methylobacterium extorquens PA1 5831452 YP_001639625.1 CDS Mext_2159 NC_010172.1 2417612 2419687 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 2417612..2419687 Methylobacterium extorquens PA1 5831453 YP_001639626.1 CDS Mext_2160 NC_010172.1 2419741 2420931 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 2419741..2420931 Methylobacterium extorquens PA1 5831454 YP_001639627.1 CDS rpsJ NC_010172.1 2421011 2421319 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 2421011..2421319 Methylobacterium extorquens PA1 5831455 YP_001639628.1 CDS rplC NC_010172.1 2421370 2422110 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 2421370..2422110 Methylobacterium extorquens PA1 5835270 YP_001639629.1 CDS rplD NC_010172.1 2422110 2422730 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 2422110..2422730 Methylobacterium extorquens PA1 5835271 YP_001639630.1 CDS rplW NC_010172.1 2422727 2423023 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 2422727..2423023 Methylobacterium extorquens PA1 5835272 YP_001639631.1 CDS rplB NC_010172.1 2423049 2423885 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 2423049..2423885 Methylobacterium extorquens PA1 5835273 YP_001639632.1 CDS rpsS NC_010172.1 2423891 2424169 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 2423891..2424169 Methylobacterium extorquens PA1 5834393 YP_001639633.1 CDS rplV NC_010172.1 2424171 2424554 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 2424171..2424554 Methylobacterium extorquens PA1 5834394 YP_001639634.1 CDS Mext_2168 NC_010172.1 2424566 2425312 D KEGG: xau:Xaut_1685 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein; 30S ribosomal protein S3 2424566..2425312 Methylobacterium extorquens PA1 5834395 YP_001639635.1 CDS rplP NC_010172.1 2425346 2425759 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 2425346..2425759 Methylobacterium extorquens PA1 5834396 YP_001639636.1 CDS Mext_2170 NC_010172.1 2425772 2425987 D PFAM: ribosomal protein L29; KEGG: sme:SMc01301 50S ribosomal protein L29; 50S ribosomal protein L29 2425772..2425987 Methylobacterium extorquens PA1 5834793 YP_001639637.1 CDS rpsQ NC_010172.1 2425999 2426265 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 2425999..2426265 Methylobacterium extorquens PA1 5834794 YP_001639638.1 CDS Mext_2172 NC_010172.1 2426921 2428309 D PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rba:RB5871 cell division protein FtsH homolog; ATPase central domain-containing protein 2426921..2428309 Methylobacterium extorquens PA1 5834795 YP_001639639.1 CDS Mext_2173 NC_010172.1 2428523 2428981 R PFAM: NUDIX hydrolase; KEGG: xau:Xaut_3446 NUDIX hydrolase; NUDIX hydrolase complement(2428523..2428981) Methylobacterium extorquens PA1 5834796 YP_001639640.1 CDS Mext_2174 NC_010172.1 2429227 2429691 R PFAM: regulatory protein MarR; transcriptional regulator PadR family protein; KEGG: reu:Reut_B5560 regulatory protein, MarR; regulatory protein MarR complement(2429227..2429691) Methylobacterium extorquens PA1 5834436 YP_001639641.1 CDS rplQ NC_010172.1 2429981 2430397 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(2429981..2430397) Methylobacterium extorquens PA1 5834437 YP_001639642.1 CDS Mext_2176 NC_010172.1 2430627 2431724 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(2430627..2431724) Methylobacterium extorquens PA1 5834438 YP_001639643.1 CDS Mext_2177 NC_010172.1 2431745 2432626 R PFAM: beta-lactamase domain protein; KEGG: rpc:RPC_1473 beta-lactamase-like; beta-lactamase domain-containing protein complement(2431745..2432626) Methylobacterium extorquens PA1 5834439 YP_001639644.1 CDS Mext_2178 NC_010172.1 2432664 2433053 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(2432664..2433053) Methylobacterium extorquens PA1 5833435 YP_001639645.1 CDS rpsM NC_010172.1 2433223 2433591 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(2433223..2433591) Methylobacterium extorquens PA1 5833436 YP_001639646.1 CDS adk NC_010172.1 2433895 2434497 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(2433895..2434497) Methylobacterium extorquens PA1 5833437 YP_001639647.1 CDS Mext_2181 NC_010172.1 2434668 2436011 R TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: xau:Xaut_4778 preprotein translocase, SecY subunit; preprotein translocase subunit SecY complement(2434668..2436011) Methylobacterium extorquens PA1 5833438 YP_001639648.1 CDS rplO NC_010172.1 2436126 2436635 R late assembly protein; 50S ribosomal protein L15 complement(2436126..2436635) Methylobacterium extorquens PA1 5832444 YP_001639649.1 CDS rpmD NC_010172.1 2436649 2436843 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(2436649..2436843) Methylobacterium extorquens PA1 5832445 YP_001639650.1 CDS rpsE NC_010172.1 2436855 2437433 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(2436855..2437433) Methylobacterium extorquens PA1 5832446 YP_001639651.1 CDS rplR NC_010172.1 2437524 2437886 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(2437524..2437886) Methylobacterium extorquens PA1 5832447 YP_001639652.1 CDS rplF NC_010172.1 2437898 2438431 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(2437898..2438431) Methylobacterium extorquens PA1 5834722 YP_001639653.1 CDS Mext_2187 NC_010172.1 2438448 2438843 R PFAM: ribosomal protein S8; KEGG: xau:Xaut_4784 ribosomal protein S8; 30S ribosomal protein S8 complement(2438448..2438843) Methylobacterium extorquens PA1 5834723 YP_001639654.1 CDS rpsN NC_010172.1 2438856 2439161 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(2438856..2439161) Methylobacterium extorquens PA1 5834724 YP_001639655.1 CDS Mext_2189 NC_010172.1 2439203 2439769 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(2439203..2439769) Methylobacterium extorquens PA1 5834725 YP_001639656.1 CDS rplX NC_010172.1 2439762 2440076 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(2439762..2440076) Methylobacterium extorquens PA1 5834465 YP_001639657.1 CDS rplN NC_010172.1 2440076 2440444 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(2440076..2440444) Methylobacterium extorquens PA1 5834466 YP_001639658.1 CDS Mext_2192 NC_010172.1 2440798 2441079 R hypothetical protein complement(2440798..2441079) Methylobacterium extorquens PA1 5834467 YP_001639659.1 CDS Mext_2193 NC_010172.1 2441388 2441921 R PFAM: nuclease (SNase domain protein); KEGG: xcb:XC_2149 succinoglycan biosynthesis protein; nuclease complement(2441388..2441921) Methylobacterium extorquens PA1 5834468 YP_001639660.1 CDS Mext_2194 NC_010172.1 2442524 2442904 D hypothetical protein 2442524..2442904 Methylobacterium extorquens PA1 5834637 YP_001639661.1 CDS Mext_2195 NC_010172.1 2443018 2444265 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: smd:Smed_5323 diguanylate cyclase; diguanylate cyclase 2443018..2444265 Methylobacterium extorquens PA1 5834638 YP_001639662.1 CDS Mext_2196 NC_010172.1 2444326 2445426 D KEGG: bpl:BURPS1106A_1526 hypothetical protein; hypothetical protein 2444326..2445426 Methylobacterium extorquens PA1 5834639 YP_001639663.1 CDS Mext_2197 NC_010172.1 2445491 2446003 R hypothetical protein complement(2445491..2446003) Methylobacterium extorquens PA1 5834640 YP_001639664.1 CDS Mext_2198 NC_010172.1 2446162 2446290 R hypothetical protein complement(2446162..2446290) Methylobacterium extorquens PA1 5834472 YP_001639665.1 CDS Mext_2199 NC_010172.1 2446339 2446635 R hypothetical protein complement(2446339..2446635) Methylobacterium extorquens PA1 5834473 YP_001639666.1 CDS Mext_2200 NC_010172.1 2446919 2447176 D KEGG: oan:Oant_3682 hypothetical protein; hypothetical protein 2446919..2447176 Methylobacterium extorquens PA1 5834474 YP_001639667.1 CDS Mext_2201 NC_010172.1 2447180 2447449 D hypothetical protein 2447180..2447449 Methylobacterium extorquens PA1 5834475 YP_001639668.1 CDS Mext_2202 NC_010172.1 2447446 2447715 D KEGG: rpc:RPC_3285 hypothetical protein; hypothetical protein 2447446..2447715 Methylobacterium extorquens PA1 5834610 YP_001639669.1 CDS Mext_2203 NC_010172.1 2448038 2449225 R PFAM: monooxygenase FAD-binding; KEGG: bja:blr5591 salicylate hydroxylase; FAD-binding monooxygenase complement(2448038..2449225) Methylobacterium extorquens PA1 5834612 YP_001639670.1 CDS Mext_2204 NC_010172.1 2449241 2449507 R KEGG: xau:Xaut_3232 hypothetical protein; hypothetical protein complement(2449241..2449507) Methylobacterium extorquens PA1 5833847 YP_001639671.1 CDS Mext_2205 NC_010172.1 2449640 2450092 D PFAM: GCN5-related N-acetyltransferase; KEGG: rle:RL1320 autolysin AtlE and putative transcriptional regulator AtlR genes, complete cds (hypothetical protein se0751); N-acetyltransferase GCN5 2449640..2450092 Methylobacterium extorquens PA1 5833848 YP_001639672.1 CDS Mext_2206 NC_010172.1 2450287 2451141 D TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: pla:Plav_2600 methionine aminopeptidase, type I; methionine aminopeptidase 2450287..2451141 Methylobacterium extorquens PA1 5833849 YP_001639673.1 CDS Mext_2207 NC_010172.1 2451156 2451902 D PFAM: DNA repair protein RadC; KEGG: nha:Nham_0430 DNA repair protein RadC; DNA repair protein RadC 2451156..2451902 Methylobacterium extorquens PA1 5833850 YP_001639674.1 CDS Mext_2208 NC_010172.1 2452218 2453657 D PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rpe:RPE_2297 protein of unknown function DUF404; hypothetical protein 2452218..2453657 Methylobacterium extorquens PA1 5831214 YP_001639675.1 CDS Mext_2209 NC_010172.1 2453765 2454709 D PFAM: protein of unknown function DUF403; KEGG: xau:Xaut_3539 protein of unknown function DUF403; hypothetical protein 2453765..2454709 Methylobacterium extorquens PA1 5831215 YP_001639676.1 CDS Mext_2210 NC_010172.1 2454792 2455046 R hypothetical protein complement(2454792..2455046) Methylobacterium extorquens PA1 5831216 YP_001639677.1 CDS Mext_2211 NC_010172.1 2455087 2455536 R KEGG: sme:SMb21030 hypothetical protein; hypothetical protein complement(2455087..2455536) Methylobacterium extorquens PA1 5831217 YP_001639678.1 CDS Mext_2212 NC_010172.1 2455551 2455859 D hypothetical protein 2455551..2455859 Methylobacterium extorquens PA1 5833823 YP_001639679.1 CDS Mext_2213 NC_010172.1 2456075 2456497 R KEGG: rle:RL1067 hypothetical protein; hypothetical protein complement(2456075..2456497) Methylobacterium extorquens PA1 5833824 YP_001639680.1 CDS Mext_2214 NC_010172.1 2457013 2457873 D PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: bbt:BBta_5275 hypothetical protein; transglutaminase domain-containing protein 2457013..2457873 Methylobacterium extorquens PA1 5833825 YP_001639681.1 CDS Mext_2215 NC_010172.1 2458027 2458773 D KEGG: rpb:RPB_3219 putative proteasome-type protease; putative proteasome-type protease 2458027..2458773 Methylobacterium extorquens PA1 5833826 YP_001639682.1 CDS Mext_2216 NC_010172.1 2458888 2459595 R PFAM: Silent information regulator protein Sir2; KEGG: ccr:CC_3480 transcriptional regulator, Sir2 family; silent information regulator protein Sir2 complement(2458888..2459595) Methylobacterium extorquens PA1 5832753 YP_001639683.1 CDS Mext_2217 NC_010172.1 2459604 2460701 R PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: ret:RHE_CH02715 probable hemolysin protein; hypothetical protein complement(2459604..2460701) Methylobacterium extorquens PA1 5832754 YP_001639684.1 CDS Mext_2218 NC_010172.1 2461258 2464365 D PFAM: glycosyl transferase family 2; KEGG: bra:BRADO7033 putative glycosyl transferase, group 2; glycosyl transferase family protein 2461258..2464365 Methylobacterium extorquens PA1 5832755 YP_001639685.1 CDS Mext_2219 NC_010172.1 2464457 2464687 D hypothetical protein 2464457..2464687 Methylobacterium extorquens PA1 5832756 YP_001639686.1 CDS Mext_2220 NC_010172.1 2464810 2465061 R hypothetical protein complement(2464810..2465061) Methylobacterium extorquens PA1 5832695 YP_001639687.1 CDS Mext_2221 NC_010172.1 2465343 2466809 R KEGG: xau:Xaut_4771 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do complement(2465343..2466809) Methylobacterium extorquens PA1 5832696 YP_001639688.1 CDS Mext_2222 NC_010172.1 2467141 2467893 R KEGG: ang:An01g09380 hypothetical protein Pfam: Extensin_2 Troponin; hypothetical protein complement(2467141..2467893) Methylobacterium extorquens PA1 5832697 YP_001639689.1 CDS Mext_2223 NC_010172.1 2468058 2468414 R TIGRFAM: phasin; KEGG: rpc:RPC_3941 phasin 2; phasin complement(2468058..2468414) Methylobacterium extorquens PA1 5832698 YP_001639690.1 CDS Mext_2224 NC_010172.1 2468643 2469947 R PFAM: glycosyl transferase group 1; KEGG: mes:Meso_2590 glycosyl transferase, group 1; group 1 glycosyl transferase complement(2468643..2469947) Methylobacterium extorquens PA1 5834286 YP_001639691.1 CDS Mext_2225 NC_010172.1 2470162 2471433 D PFAM: glycosyl transferase group 1; KEGG: mes:Meso_2590 glycosyl transferase, group 1; group 1 glycosyl transferase 2470162..2471433 Methylobacterium extorquens PA1 5834287 YP_001639692.1 CDS Mext_2226 NC_010172.1 2471521 2471700 D hypothetical protein 2471521..2471700 Methylobacterium extorquens PA1 5834288 YP_001639693.1 CDS Mext_2227 NC_010172.1 2471735 2474146 R KEGG: rpb:RPB_2161 diguanylate cyclase/phosphodiesterase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: PAS domain containing protein; diguanylate cyclase complement(2471735..2474146) Methylobacterium extorquens PA1 5834289 YP_001639694.1 CDS Mext_2228 NC_010172.1 2474293 2475981 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: xau:Xaut_0310 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein complement(2474293..2475981) Methylobacterium extorquens PA1 5832313 YP_001639695.1 CDS Mext_2229 NC_010172.1 2476144 2477067 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: mes:Meso_3027 protein of unknown function DUF6, transmembrane; hypothetical protein complement(2476144..2477067) Methylobacterium extorquens PA1 5832314 YP_001639696.1 CDS Mext_2230 NC_010172.1 2477142 2478089 D PFAM: ribonuclease BN; KEGG: xau:Xaut_0308 putative ribonuclease BN; ribonuclease BN 2477142..2478089 Methylobacterium extorquens PA1 5832315 YP_001639697.1 CDS Mext_2231 NC_010172.1 2478001 2479041 R KEGG: pat:Patl_3215 hypothetical protein; hypothetical protein complement(2478001..2479041) Methylobacterium extorquens PA1 5832316 YP_001639698.1 CDS Mext_2232 NC_010172.1 2479286 2480695 R KEGG: ccr:CC_1482 sulfate adenylate transferase, subunit 1/adenylylsulfate kinase; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; sulfate adenylyltransferase, large subunit complement(2479286..2480695) Methylobacterium extorquens PA1 5831926 YP_001639699.1 CDS Mext_2233 NC_010172.1 2480695 2481624 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(2480695..2481624) Methylobacterium extorquens PA1 5831927 YP_001639700.1 CDS Mext_2234 NC_010172.1 2481624 2482433 R KEGG: ret:RHE_CH01132 phosphoadenosine-phosphosulfate reductase protein; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase; adenylylsulfate reductase complement(2481624..2482433) Methylobacterium extorquens PA1 5831928 YP_001639701.1 CDS Mext_2235 NC_010172.1 2482698 2483201 D PFAM: regulatory protein AsnC/Lrp family; KEGG: rpb:RPB_0007 transcriptional regulator, AsnC family; AsnC/Lrp family regulatory protein 2482698..2483201 Methylobacterium extorquens PA1 5831929 YP_001639702.1 CDS Mext_2236 NC_010172.1 2483302 2485089 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: acr:Acry_2801 flavodoxin/nitric oxide synthase; flavodoxin/nitric oxide synthase 2483302..2485089 Methylobacterium extorquens PA1 5833835 YP_001639703.1 CDS Mext_2237 NC_010172.1 2485148 2487121 D hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 2485148..2487121 Methylobacterium extorquens PA1 5833836 YP_001639704.1 CDS Mext_2238 NC_010172.1 2487185 2487613 R KEGG: yen:YE3189 putative hydroxamate-type ferrisiderophore receptor; putative hydroxamate-type ferrisiderophore receptor complement(2487185..2487613) Methylobacterium extorquens PA1 5833837 YP_001639705.1 CDS Mext_2239 NC_010172.1 2487617 2489365 R PFAM: TonB-dependent receptor plug; KEGG: kpn:KPN_02105 TonB-dependent receptor; TonB-dependent receptor plug complement(2487617..2489365) Methylobacterium extorquens PA1 5833838 YP_001639706.1 CDS panC NC_010172.1 2489698 2490555 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(2489698..2490555) Methylobacterium extorquens PA1 5833598 YP_001639707.1 CDS Mext_2241 NC_010172.1 2490631 2490990 R hypothetical protein complement(2490631..2490990) Methylobacterium extorquens PA1 5833599 YP_001639708.1 CDS Mext_2242 NC_010172.1 2491063 2491668 R PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: xau:Xaut_4694 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein complement(2491063..2491668) Methylobacterium extorquens PA1 5833600 YP_001639709.1 CDS Mext_2243 NC_010172.1 2492045 2492614 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mmr:Mmar10_1884 single-strand binding protein; single-strand binding protein complement(2492045..2492614) Methylobacterium extorquens PA1 5833601 YP_001639710.1 CDS Mext_2244 NC_010172.1 2492849 2493865 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: mxa:MXAN_3170 oxidoreductase, zinc-binding dehydrogenase family; alcohol dehydrogenase complement(2492849..2493865) Methylobacterium extorquens PA1 5833352 YP_001639711.1 CDS Mext_2245 NC_010172.1 2493958 2494365 D KEGG: bra:BRADO4341 hypothetical protein; putative secreted protein; hypothetical protein 2493958..2494365 Methylobacterium extorquens PA1 5833353 YP_001639712.1 CDS Mext_2246 NC_010172.1 2494416 2494982 R KEGG: mmu:13211 DEAH (Asp-Glu-Ala-His) box polypeptide 9; hypothetical protein complement(2494416..2494982) Methylobacterium extorquens PA1 5833354 YP_001639713.1 CDS Mext_2247 NC_010172.1 2495209 2495985 D KEGG: mlo:mlr0120 hypothetical protein; hypothetical protein 2495209..2495985 Methylobacterium extorquens PA1 5833355 YP_001639714.1 CDS Mext_2248 NC_010172.1 2496144 2497262 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rme:Rmet_4859 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase complement(2496144..2497262) Methylobacterium extorquens PA1 5831079 YP_001639715.1 CDS Mext_2249 NC_010172.1 2497432 2498421 D PFAM: Glutathione S-transferase domain; KEGG: oan:Oant_1604 putative glutathione S-transferase; glutathione S-transferase domain-containing protein 2497432..2498421 Methylobacterium extorquens PA1 5831080 YP_001639716.1 CDS Mext_2250 NC_010172.1 2498493 2499008 D KEGG: ret:RHE_CH03579 hypothetical protein; hypothetical protein 2498493..2499008 Methylobacterium extorquens PA1 5831081 YP_001639717.1 CDS Mext_2251 NC_010172.1 2499245 2500153 D PFAM: Thioredoxin domain; KEGG: oan:Oant_3284 thioredoxin; thioredoxin domain-containing protein 2499245..2500153 Methylobacterium extorquens PA1 5831082 YP_001639718.1 CDS Mext_2252 NC_010172.1 2500239 2500907 D PFAM: peptidase S16 lon domain protein; KEGG: rpc:RPC_0265 peptidase S16, lon-like; peptidase S16 lon domain-containing protein 2500239..2500907 Methylobacterium extorquens PA1 5832634 YP_001639719.1 CDS Mext_2253 NC_010172.1 2500965 2501171 D PFAM: protein of unknown function DUF343; KEGG: bra:BRADO0313 hypothetical protein; hypothetical protein 2500965..2501171 Methylobacterium extorquens PA1 5832635 YP_001639720.1 CDS Mext_2254 NC_010172.1 2501326 2502285 R PFAM: import inner membrane translocase subunit Tim44; KEGG: bra:BRADO5022 conserved hypothetical protein; putative signal peptide; import inner membrane translocase subunit Tim44 complement(2501326..2502285) Methylobacterium extorquens PA1 5832636 YP_001639721.1 CDS Mext_2255 NC_010172.1 2502486 2503601 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aav:Aave_3564 PAS/PAC sensor hybrid histidine kinase; PAS sensor protein complement(2502486..2503601) Methylobacterium extorquens PA1 5832637 YP_001639722.1 CDS Mext_2256 NC_010172.1 2503723 2504427 R PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: nha:Nham_2572 transglutaminase-like cysteine peptidase, BTLCP; transglutaminase complement(2503723..2504427) Methylobacterium extorquens PA1 5831467 YP_001639723.1 CDS Mext_2257 NC_010172.1 2504634 2505293 R PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: rpa:RPA3421 hypothetical protein; transglutaminase complement(2504634..2505293) Methylobacterium extorquens PA1 5831468 YP_001639724.1 CDS Mext_2258 NC_010172.1 2505742 2506365 R PFAM: type IV pilus assembly PilZ; KEGG: nha:Nham_2571 hypothetical protein; type IV pilus assembly PilZ complement(2505742..2506365) Methylobacterium extorquens PA1 5831469 YP_001639725.1 CDS Mext_2259 NC_010172.1 2506574 2507320 R PFAM: protein of unknown function DUF1457; KEGG: smd:Smed_1044 protein of unknown function DUF1457; hypothetical protein complement(2506574..2507320) Methylobacterium extorquens PA1 5831470 YP_001639726.1 CDS Mext_2260 NC_010172.1 2507435 2508259 D PFAM: Rhomboid family protein; KEGG: smd:Smed_1045 rhomboid family protein; rhomboid family protein 2507435..2508259 Methylobacterium extorquens PA1 5832648 YP_001639727.1 CDS Mext_2261 NC_010172.1 2508501 2509388 D KEGG: xau:Xaut_4179 hypothetical protein; hypothetical protein 2508501..2509388 Methylobacterium extorquens PA1 5832649 YP_001639728.1 CDS Mext_2262 NC_010172.1 2509747 2510178 D PFAM: CBS domain containing protein; KEGG: mlo:mlr0188 hypothetical protein; hypothetical protein 2509747..2510178 Methylobacterium extorquens PA1 5832650 YP_001639729.1 CDS Mext_2263 NC_010172.1 2510231 2511289 R PFAM: Patatin; KEGG: xau:Xaut_1647 patatin; patatin complement(2510231..2511289) Methylobacterium extorquens PA1 5832651 YP_001639730.1 CDS Mext_2264 NC_010172.1 2511286 2511708 R PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: pla:Plav_2663 phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase complement(2511286..2511708) Methylobacterium extorquens PA1 5831385 YP_001639731.1 CDS Mext_2265 NC_010172.1 2511728 2512537 R PFAM: GTP cyclohydrolase I; KEGG: xau:Xaut_1649 GTP cyclohydrolase I; GTP cyclohydrolase I complement(2511728..2512537) Methylobacterium extorquens PA1 5831386 YP_001639732.1 CDS Mext_2266 NC_010172.1 2512761 2513234 D PFAM: nitrogen-fixing NifU domain protein; KEGG: rpc:RPC_3115 nitrogen-fixing NifU-like; NifU domain-containing protein 2512761..2513234 Methylobacterium extorquens PA1 5831387 YP_001639733.1 CDS Mext_2267 NC_010172.1 2513306 2513626 D PFAM: protein of unknown function DUF37; KEGG: rpa:RPA3394 hypothetical protein; hypothetical protein 2513306..2513626 Methylobacterium extorquens PA1 5831388 YP_001639734.1 CDS Mext_2268 NC_010172.1 2513783 2514667 R PFAM: protein of unknown function UPF0005; KEGG: oan:Oant_0100 protein of unknown function UPF0005; hypothetical protein complement(2513783..2514667) Methylobacterium extorquens PA1 5833100 YP_001639735.1 CDS Mext_2269 NC_010172.1 2514777 2517455 R PFAM: protein of unknown function DUF214; KEGG: nwi:Nwi_0414 protein of unknown function DUF214; hypothetical protein complement(2514777..2517455) Methylobacterium extorquens PA1 5833101 YP_001639736.1 CDS Mext_2270 NC_010172.1 2517472 2518887 R PFAM: ATP-binding region ATPase domain protein; KEGG: rpa:RPA4524 sensor histidine kinase; ATPase domain-containing protein complement(2517472..2518887) Methylobacterium extorquens PA1 5833102 YP_001639737.1 CDS Mext_2271 NC_010172.1 2519029 2519778 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 2519029..2519778 Methylobacterium extorquens PA1 5833103 YP_001639738.1 CDS acpS NC_010172.1 2519775 2520185 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 2519775..2520185 Methylobacterium extorquens PA1 5832484 YP_001639739.1 CDS Mext_2273 NC_010172.1 2520315 2521121 D KEGG: rpd:RPD_2650 peptidase S26A, signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 2520315..2521121 Methylobacterium extorquens PA1 5832485 YP_001639740.1 CDS Mext_2274 NC_010172.1 2521182 2521952 D PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: rpa:RPA2697 putative ribonuclease III; ribonuclease III 2521182..2521952 Methylobacterium extorquens PA1 5832486 YP_001639741.1 CDS Mext_2275 NC_010172.1 2521973 2522953 D TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: rpe:RPE_3021 GTP-binding protein Era; GTP-binding protein Era 2521973..2522953 Methylobacterium extorquens PA1 5832487 YP_001639742.1 CDS Mext_2276 NC_010172.1 2523137 2524075 D PFAM: methyltransferase small; KEGG: ccr:CC_1837 hypothetical protein; methyltransferase small 2523137..2524075 Methylobacterium extorquens PA1 5834542 YP_001639743.1 CDS Mext_2277 NC_010172.1 2524072 2524800 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: ccr:CC_1838 ribosomal small subunit pseudouridine synthase A; pseudouridine synthase 2524072..2524800 Methylobacterium extorquens PA1 5834543 YP_001639744.1 CDS Mext_2278 NC_010172.1 2524805 2525428 R KEGG: jan:Jann_0526 hypothetical protein; hypothetical protein complement(2524805..2525428) Methylobacterium extorquens PA1 5834544 YP_001639745.1 CDS Mext_2279 NC_010172.1 2525670 2527064 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: mgm:Mmc1_2003 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 2525670..2527064 Methylobacterium extorquens PA1 5834545 YP_001639746.1 CDS Mext_2280 NC_010172.1 2527253 2528044 D KEGG: ret:RHE_CH00820 hypothetical protein; hypothetical protein 2527253..2528044 Methylobacterium extorquens PA1 5834531 YP_001639747.1 CDS Mext_2281 NC_010172.1 2528255 2528560 D hypothetical protein 2528255..2528560 Methylobacterium extorquens PA1 5834532 YP_001639748.1 CDS Mext_2282 NC_010172.1 2528568 2530496 R PFAM: K potassium transporter; KEGG: bja:blr4695 potassium uptake protein; K potassium transporter complement(2528568..2530496) Methylobacterium extorquens PA1 5834533 YP_001639749.1 CDS Mext_2283 NC_010172.1 2530696 2531352 R KEGG: rpa:RPA4031 hypothetical protein; hypothetical protein complement(2530696..2531352) Methylobacterium extorquens PA1 5834534 YP_001639750.1 CDS Mext_2284 NC_010172.1 2531380 2531967 R PFAM: NUDIX hydrolase; KEGG: xau:Xaut_2145 NUDIX hydrolase; NUDIX hydrolase complement(2531380..2531967) Methylobacterium extorquens PA1 5834676 YP_001639751.1 CDS Mext_2285 NC_010172.1 2532112 2533800 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpa:RPA4638 methyl-accepting chemotaxis receptor/sensory transducer; chemotaxis sensory transducer protein complement(2532112..2533800) Methylobacterium extorquens PA1 5834677 YP_001639752.1 CDS Mext_2286 NC_010172.1 2534163 2535419 R PFAM: protein of unknown function DUF610 YibQ; KEGG: nwi:Nwi_0450 hypothetical protein; hypothetical protein complement(2534163..2535419) Methylobacterium extorquens PA1 5834678 YP_001639753.1 CDS Mext_2287 NC_010172.1 2535519 2536841 R KEGG: rpb:RPB_0258 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease complement(2535519..2536841) Methylobacterium extorquens PA1 5834679 YP_001639754.1 CDS Mext_2288 NC_010172.1 2536841 2538241 R PFAM: peptidase M23B; KEGG: rpa:RPA0168 putative filament-A precursor; peptidase M23B complement(2536841..2538241) Methylobacterium extorquens PA1 5830925 YP_001639755.1 CDS Mext_2289 NC_010172.1 2538238 2538735 R SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase complement(2538238..2538735) Methylobacterium extorquens PA1 5830926 YP_001639756.1 CDS Mext_2290 NC_010172.1 2538983 2540293 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rme:Rmet_5758 major facilitator superfamily MFS_1; general substrate transporter 2538983..2540293 Methylobacterium extorquens PA1 5830927 YP_001639757.1 CDS Mext_2291 NC_010172.1 2540568 2542523 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bxe:Bxe_B1411 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains); diguanylate cyclase 2540568..2542523 Methylobacterium extorquens PA1 5830928 YP_001639758.1 CDS Mext_2292 NC_010172.1 2542528 2543154 R PFAM: DSBA oxidoreductase; KEGG: pla:Plav_1378 DsbA oxidoreductase; DSBA oxidoreductase complement(2542528..2543154) Methylobacterium extorquens PA1 5835678 YP_001639759.1 CDS Mext_2293 NC_010172.1 2543329 2544570 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 2543329..2544570 Methylobacterium extorquens PA1 5835679 YP_001639760.1 CDS Mext_2294 NC_010172.1 2544774 2545088 R KEGG: mlo:mll1459 hypothetical protein; hypothetical protein complement(2544774..2545088) Methylobacterium extorquens PA1 5835680 YP_001639761.1 CDS Mext_2295 NC_010172.1 2545146 2545811 R KEGG: bur:Bcep18194_A6516 hypothetical protein; hypothetical protein complement(2545146..2545811) Methylobacterium extorquens PA1 5835681 YP_001639762.1 CDS Mext_2296 NC_010172.1 2546007 2546708 R TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: nwi:Nwi_1220 phosphoglycolate phosphatase; phosphoglycolate phosphatase complement(2546007..2546708) Methylobacterium extorquens PA1 5834595 YP_001639763.1 CDS Mext_2297 NC_010172.1 2546892 2547401 D KEGG: xau:Xaut_3220 hypothetical protein; hypothetical protein 2546892..2547401 Methylobacterium extorquens PA1 5834596 YP_001639764.1 CDS Mext_2298 NC_010172.1 2547582 2548292 D KEGG: bms:BR1010 ribose 5-phosphate isomerase A; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 2547582..2548292 Methylobacterium extorquens PA1 5834597 YP_001639765.1 CDS Mext_2299 NC_010172.1 2548334 2548930 D KEGG: xau:Xaut_3222 hypothetical protein; hypothetical protein 2548334..2548930 Methylobacterium extorquens PA1 5834598 YP_001639766.1 CDS Mext_2300 NC_010172.1 2548985 2550271 D PFAM: O-antigen polymerase; KEGG: rru:Rru_A2114 O-antigen polymerase; O-antigen polymerase 2548985..2550271 Methylobacterium extorquens PA1 5835649 YP_001639767.1 CDS Mext_2301 NC_010172.1 2550268 2551668 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: xau:Xaut_3224 glutathione-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase dimerisation region 2550268..2551668 Methylobacterium extorquens PA1 5835650 YP_001639768.1 CDS Mext_2302 NC_010172.1 2551670 2553094 R KEGG: rpe:RPE_2709 TRAP transporter solute receptor, TAXI family; TRAP-type transport system periplasmic component-like protein complement(2551670..2553094) Methylobacterium extorquens PA1 5835651 YP_001639769.1 CDS Mext_2303 NC_010172.1 2553175 2553810 D KEGG: rru:Rru_A0639 regulatory protein RecX; hypothetical protein 2553175..2553810 Methylobacterium extorquens PA1 5835652 YP_001639770.1 CDS Mext_2304 NC_010172.1 2553896 2554327 D PFAM: OsmC family protein; KEGG: bja:bll6262 probable osmotically inducible protein; OsmC family protein 2553896..2554327 Methylobacterium extorquens PA1 5835693 YP_001639771.1 CDS Mext_2305 NC_010172.1 2554434 2555645 D PFAM: Radical SAM domain protein; KEGG: eli:ELI_05380 hypothetical protein; radical SAM domain-containing protein 2554434..2555645 Methylobacterium extorquens PA1 5835694 YP_001639772.1 CDS Mext_2306 NC_010172.1 2555645 2557102 D PFAM: Uracil-DNA glycosylase superfamily; KEGG: rpe:RPE_1823 phage SPO1 DNA polymerase-related protein; uracil-DNA glycosylase superfamily protein 2555645..2557102 Methylobacterium extorquens PA1 5835695 YP_001639773.1 CDS Mext_2307 NC_010172.1 2557373 2558545 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B2482 putative zinc-containing dehydrogenase; alcohol dehydrogenase 2557373..2558545 Methylobacterium extorquens PA1 5835696 YP_001639774.1 CDS Mext_2308 NC_010172.1 2558655 2559272 D KEGG: psa:PST_0139 probable transcriptional regulator; hypothetical protein 2558655..2559272 Methylobacterium extorquens PA1 5834274 YP_001639775.1 CDS Mext_2309 NC_010172.1 2559334 2561031 R KEGG: rpa:RPA3382 hypothetical protein; hypothetical protein complement(2559334..2561031) Methylobacterium extorquens PA1 5834275 YP_001639776.1 CDS Mext_2310 NC_010172.1 2561028 2562146 R KEGG: rpb:RPB_2186 hypothetical protein; hypothetical protein complement(2561028..2562146) Methylobacterium extorquens PA1 5834276 YP_001639777.1 CDS Mext_2311 NC_010172.1 2562325 2562987 D PFAM: HpcH/HpaI aldolase; KEGG: mlo:mlr0906 citrate lyase beta chain; HpcH/HpaI aldolase 2562325..2562987 Methylobacterium extorquens PA1 5834277 YP_001639778.1 CDS Mext_2312 NC_010172.1 2563026 2563613 D PFAM: Glutathione S-transferase domain; KEGG: rpa:RPA4314 possible glutathione S-transferase; glutathione S-transferase domain-containing protein 2563026..2563613 Methylobacterium extorquens PA1 5835766 YP_001639779.1 CDS Mext_2313 NC_010172.1 2563751 2564026 D hypothetical protein 2563751..2564026 Methylobacterium extorquens PA1 5835767 YP_001639780.1 CDS Mext_2314 NC_010172.1 2564199 2565191 D PFAM: Catalase domain protein; KEGG: bbt:BBta_6719 catalase, protein SrpA precursor; catalase domain-containing protein 2564199..2565191 Methylobacterium extorquens PA1 5835768 YP_001639781.1 CDS Mext_2315 NC_010172.1 2565220 2565483 R hypothetical protein complement(2565220..2565483) Methylobacterium extorquens PA1 5835769 YP_001639782.1 CDS Mext_2316 NC_010172.1 2565624 2566229 R KEGG: xau:Xaut_1646 hypothetical protein; hypothetical protein complement(2565624..2566229) Methylobacterium extorquens PA1 5835628 YP_001639783.1 CDS Mext_2317 NC_010172.1 2566240 2566833 R PFAM: nitroreductase; KEGG: rpd:RPD_3262 nitroreductase; nitroreductase complement(2566240..2566833) Methylobacterium extorquens PA1 5835629 YP_001639784.1 CDS Mext_2318 NC_010172.1 2566855 2567904 D KEGG: xau:Xaut_1636 hypothetical protein; hypothetical protein 2566855..2567904 Methylobacterium extorquens PA1 5835630 YP_001639785.1 CDS Mext_2319 NC_010172.1 2567910 2568302 D hypothetical protein 2567910..2568302 Methylobacterium extorquens PA1 5835631 YP_001639786.1 CDS Mext_2320 NC_010172.1 2568749 2570143 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bch:Bcen2424_4885 transcriptional regulator, GntR family; regulatory protein GntR 2568749..2570143 Methylobacterium extorquens PA1 5831048 YP_001639787.1 CDS thrS NC_010172.1 2570174 2572201 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(2570174..2572201) Methylobacterium extorquens PA1 5831049 YP_001639788.1 CDS Mext_2322 NC_010172.1 2572367 2573137 R hypothetical protein complement(2572367..2573137) Methylobacterium extorquens PA1 5831050 YP_001639789.1 CDS Mext_2323 NC_010172.1 2573116 2574081 R PFAM: ROK family protein; KEGG: sfu:Sfum_0489 ROK family protein; ROK family protein complement(2573116..2574081) Methylobacterium extorquens PA1 5831051 YP_001639790.1 CDS Mext_2324 NC_010172.1 2574041 2575438 R PFAM: sodium:dicarboxylate symporter; KEGG: bja:blr7187 C4-dicarboxylate transport protein; sodium:dicarboxylate symporter complement(2574041..2575438) Methylobacterium extorquens PA1 5832667 YP_001639791.1 CDS ileS NC_010172.1 2575921 2578896 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 2575921..2578896 Methylobacterium extorquens PA1 5832668 YP_001639792.1 CDS Mext_2326 NC_010172.1 2578893 2579408 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 2578893..2579408 Methylobacterium extorquens PA1 5832669 YP_001639793.1 CDS Mext_2327 NC_010172.1 2579571 2580263 D KEGG: xau:Xaut_2205 hypothetical protein; hypothetical protein 2579571..2580263 Methylobacterium extorquens PA1 5832670 YP_001639794.1 CDS Mext_2328 NC_010172.1 2580456 2581838 D PFAM: peptidase M16 domain protein; KEGG: xau:Xaut_2204 peptidase M16 domain protein; peptidase M16 domain-containing protein 2580456..2581838 Methylobacterium extorquens PA1 5833540 YP_001639795.1 CDS Mext_2329 NC_010172.1 2581910 2583193 D PFAM: peptidase M16 domain protein; KEGG: xau:Xaut_2203 peptidase M16 domain protein; peptidase M16 domain-containing protein 2581910..2583193 Methylobacterium extorquens PA1 5833541 YP_001639796.1 CDS Mext_2330 NC_010172.1 2583379 2584311 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: smd:Smed_2404 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2583379..2584311 Methylobacterium extorquens PA1 5833542 YP_001639797.1 CDS Mext_2331 NC_010172.1 2584481 2585254 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bja:blr3831 ferredoxin NADP+ reductase; oxidoreductase FAD/NAD(P)-binding subunit 2584481..2585254 Methylobacterium extorquens PA1 5833543 YP_001639798.1 CDS Mext_2332 NC_010172.1 2585546 2586223 D TIGRFAM: dethiobiotin synthase; KEGG: pla:Plav_0040 dethiobiotin synthase; dethiobiotin synthase 2585546..2586223 Methylobacterium extorquens PA1 5835043 YP_001639799.1 CDS Mext_2333 NC_010172.1 2586230 2586586 R KEGG: rpc:RPC_3528 PRC-barrel; PRC-barrel protein complement(2586230..2586586) Methylobacterium extorquens PA1 5835044 YP_001639800.1 CDS Mext_2334 NC_010172.1 2586621 2587040 R PFAM: response regulator receiver; KEGG: bam:Bamb_4524 PAS/PAC sensor hybrid histidine kinase; response regulator receiver complement(2586621..2587040) Methylobacterium extorquens PA1 5835045 YP_001639801.1 CDS Mext_2335 NC_010172.1 2587233 2587982 D PFAM: protein of unknown function DUF1275; KEGG: bov:BOV_1767 hypothetical protein; hypothetical protein 2587233..2587982 Methylobacterium extorquens PA1 5835046 YP_001639802.1 CDS Mext_2336 NC_010172.1 2588000 2589007 D SMART: WD-40 repeat protein; KEGG: rpb:RPB_4555 WD-40 repeat protein; WD-40 repeat-containing protein 2588000..2589007 Methylobacterium extorquens PA1 5835602 YP_001639803.1 CDS Mext_2337 NC_010172.1 2589018 2589278 D KEGG: xau:Xaut_4558 hypothetical protein; hypothetical protein 2589018..2589278 Methylobacterium extorquens PA1 5835603 YP_001639804.1 CDS Mext_2338 NC_010172.1 2589345 2589875 D KEGG: ret:RHE_CH03836 hypothetical protein; hypothetical protein 2589345..2589875 Methylobacterium extorquens PA1 5835604 YP_001639805.1 CDS Mext_2339 NC_010172.1 2590005 2591237 D KEGG: rru:Rru_A2114 O-antigen polymerase; hypothetical protein 2590005..2591237 Methylobacterium extorquens PA1 5835605 YP_001639806.1 CDS Mext_2340 NC_010172.1 2591242 2591682 R PFAM: protein of unknown function DUF1025; KEGG: bja:blr0494 hypothetical protein; hypothetical protein complement(2591242..2591682) Methylobacterium extorquens PA1 5835606 YP_001639807.1 CDS Mext_2341 NC_010172.1 2591679 2592425 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bra:BRADO0776 putative HAD-superfamily hydrolase; putative pyrimidine 5-nucleotidase; pyrimidine 5'-nucleotidase complement(2591679..2592425) Methylobacterium extorquens PA1 5831778 YP_001639808.1 CDS Mext_2342 NC_010172.1 2592513 2593409 R TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: rpa:RPA0629 acetylglutamate kinase; acetylglutamate kinase complement(2592513..2593409) Methylobacterium extorquens PA1 5831779 YP_001639809.1 CDS Mext_2343 NC_010172.1 2593809 2594033 D hypothetical protein 2593809..2594033 Methylobacterium extorquens PA1 5831780 YP_001639810.1 CDS Mext_2344 NC_010172.1 2594055 2594831 R PFAM: MOSC domain containing protein; KEGG: rpd:RPD_4096 hypothetical protein; MOSC domain-containing protein complement(2594055..2594831) Methylobacterium extorquens PA1 5831781 YP_001639811.1 CDS Mext_2345 NC_010172.1 2594968 2595762 D PFAM: MOSC domain containing protein; KEGG: pla:Plav_1750 MOSC domain containing protein; MOSC domain-containing protein 2594968..2595762 Methylobacterium extorquens PA1 5831903 YP_001639812.1 CDS Mext_2346 NC_010172.1 2595990 2598614 D KEGG: rpd:RPD_4095 ATPase AAA-2; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent chaperone ClpB 2595990..2598614 Methylobacterium extorquens PA1 5831904 YP_001639813.1 CDS Mext_2347 NC_010172.1 2598761 2599465 D PFAM: metallophosphoesterase; KEGG: sfu:Sfum_1247 metallophosphoesterase; metallophosphoesterase 2598761..2599465 Methylobacterium extorquens PA1 5831905 YP_001639814.1 CDS Mext_2348 NC_010172.1 2599593 2601032 D PFAM: short chain fatty acid transporter; KEGG: vei:Veis_4199 short chain fatty acid transporter; short chain fatty acid transporter 2599593..2601032 Methylobacterium extorquens PA1 5831906 YP_001639815.1 CDS Mext_2349 NC_010172.1 2601354 2601725 R PFAM: protein of unknown function DUF423; KEGG: rpd:RPD_0071 protein of unknown function DUF423; hypothetical protein complement(2601354..2601725) Methylobacterium extorquens PA1 5833030 YP_001639816.1 CDS engB NC_010172.1 2601722 2602492 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(2601722..2602492) Methylobacterium extorquens PA1 5833031 YP_001639817.1 CDS Mext_2351 NC_010172.1 2602630 2604480 R PFAM: 60 kDa inner membrane insertion protein; KEGG: rpd:RPD_0069 60 kDa inner membrane insertion protein; 60 kDa inner membrane insertion protein complement(2602630..2604480) Methylobacterium extorquens PA1 5833032 YP_001639818.1 CDS Mext_2352 NC_010172.1 2604473 2604970 R TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: xau:Xaut_1922 ribonuclease P protein component; ribonuclease P protein component complement(2604473..2604970) Methylobacterium extorquens PA1 5833033 YP_001639819.1 CDS rpmH NC_010172.1 2605046 2605180 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(2605046..2605180) Methylobacterium extorquens PA1 5831244 YP_001639820.1 CDS Mext_2354 NC_010172.1 2605829 2606362 D PFAM: protein of unknown function DUF1465; KEGG: nwi:Nwi_2748 protein of unknown function DUF1465; hypothetical protein 2605829..2606362 Methylobacterium extorquens PA1 5831245 YP_001639821.1 CDS Mext_2355 NC_010172.1 2606698 2606952 R TIGRFAM: ribosomal protein L31; KEGG: xau:Xaut_0843 ribosomal protein L31; 50S ribosomal protein L31 complement(2606698..2606952) Methylobacterium extorquens PA1 5831246 YP_001639822.1 CDS Mext_2356 NC_010172.1 2607249 2609105 D KEGG: bbt:BBta_6942 putative ABC transporter, ATP-binding protein, ATPase; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid ABC transporter ATPase/inner membrane protein 2607249..2609105 Methylobacterium extorquens PA1 5831247 YP_001639823.1 CDS Mext_2357 NC_010172.1 2609239 2610246 D catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 2609239..2610246 Methylobacterium extorquens PA1 5832808 YP_001639824.1 CDS Mext_2358 NC_010172.1 2610305 2610655 R hypothetical protein complement(2610305..2610655) Methylobacterium extorquens PA1 5832809 YP_001639825.1 CDS Mext_2359 NC_010172.1 2610652 2610891 R hypothetical protein complement(2610652..2610891) Methylobacterium extorquens PA1 5832810 YP_001639826.1 CDS Mext_2360 NC_010172.1 2610944 2611957 R PFAM: OmpA/MotB domain protein; KEGG: nha:Nham_3542 OmpA/MotB; OmpA/MotB domain-containing protein complement(2610944..2611957) Methylobacterium extorquens PA1 5832811 YP_001639827.1 CDS Mext_2361 NC_010172.1 2611958 2612962 R KEGG: bja:bll1511 hypothetical protein; hypothetical protein complement(2611958..2612962) Methylobacterium extorquens PA1 5834756 YP_001639828.1 CDS Mext_2362 NC_010172.1 2613115 2613936 R PFAM: metallophosphoesterase; KEGG: bra:BRADO1139 metallo-phosphoesterase; metallophosphoesterase complement(2613115..2613936) Methylobacterium extorquens PA1 5834757 YP_001639829.1 CDS Mext_2363 NC_010172.1 2614002 2614592 R PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: smd:Smed_2646 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase complement(2614002..2614592) Methylobacterium extorquens PA1 5834758 YP_001639830.1 CDS Mext_2364 NC_010172.1 2614840 2615211 R PFAM: protein of unknown function DUF710; KEGG: xau:Xaut_3073 protein of unknown function DUF710; hypothetical protein complement(2614840..2615211) Methylobacterium extorquens PA1 5834759 YP_001639831.1 CDS Mext_2365 NC_010172.1 2615235 2615555 R KEGG: mlo:msl3747 contains similarity to tropomyosin; hypothetical protein complement(2615235..2615555) Methylobacterium extorquens PA1 5833575 YP_001639832.1 CDS Mext_2366 NC_010172.1 2616018 2617025 D KEGG: smd:Smed_2651 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 2616018..2617025 Methylobacterium extorquens PA1 5833576 YP_001639833.1 CDS Mext_2367 NC_010172.1 2617220 2617726 D hypothetical protein 2617220..2617726 Methylobacterium extorquens PA1 5833577 YP_001639834.1 CDS Mext_2368 NC_010172.1 2617742 2618944 D PFAM: phosphoglycerate kinase; KEGG: rpd:RPD_4314 phosphoglycerate kinase; phosphoglycerate kinase 2617742..2618944 Methylobacterium extorquens PA1 5833578 YP_001639835.1 CDS Mext_2369 NC_010172.1 2619097 2620164 D class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 2619097..2620164 Methylobacterium extorquens PA1 5831583 YP_001639836.1 CDS Mext_2370 NC_010172.1 2620171 2620839 D PFAM: thiamine monophosphate synthase; KEGG: nha:Nham_3535 thiamine monophosphate synthase; thiamine monophosphate synthase 2620171..2620839 Methylobacterium extorquens PA1 5831584 YP_001639837.1 CDS Mext_2371 NC_010172.1 2620866 2621984 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: rpa:RPA0938 hypothetical protein; Sel1 domain-containing protein 2620866..2621984 Methylobacterium extorquens PA1 5831585 YP_001639838.1 CDS Mext_2372 NC_010172.1 2622214 2623617 D PFAM: amino acid permease-associated region; KEGG: sal:Sala_1704 amino acid permease-associated region; amino acid permease-associated protein 2622214..2623617 Methylobacterium extorquens PA1 5831586 YP_001639839.1 CDS Mext_2373 NC_010172.1 2623628 2625151 R TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: pla:Plav_3236 carbohydrate kinase, YjeF related protein; carbohydrate kinase complement(2623628..2625151) Methylobacterium extorquens PA1 5831817 YP_001639840.1 CDS Mext_2374 NC_010172.1 2625336 2625674 D PFAM: nitrogen regulatory protein P-II; KEGG: rpe:RPE_2506 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 2625336..2625674 Methylobacterium extorquens PA1 5831818 YP_001639841.1 CDS Mext_2375 NC_010172.1 2625761 2626690 D catalyzes the formation of glutamate from glutamine; glutaminase 2625761..2626690 Methylobacterium extorquens PA1 5831819 YP_001639842.1 CDS Mext_2376 NC_010172.1 2626931 2627977 R PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: bja:blr4169 glutamine synthetase II; glutamate--ammonia ligase complement(2626931..2627977) Methylobacterium extorquens PA1 5831820 YP_001639843.1 CDS Mext_2377 NC_010172.1 2628553 2629962 D TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: bja:blr4949 glutamine synthetase I; glutamine synthetase, type I 2628553..2629962 Methylobacterium extorquens PA1 5832032 YP_001639844.1 CDS Mext_2378 NC_010172.1 2630094 2630672 D PFAM: NADPH-dependent FMN reductase; KEGG: rpb:RPB_2517 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 2630094..2630672 Methylobacterium extorquens PA1 5832033 YP_001639845.1 CDS Mext_2379 NC_010172.1 2630817 2631155 D hypothetical protein 2630817..2631155 Methylobacterium extorquens PA1 5832034 YP_001639846.1 CDS Mext_2380 NC_010172.1 2631314 2633680 D KEGG: xau:Xaut_3864 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; ribonuclease R 2631314..2633680 Methylobacterium extorquens PA1 5832035 YP_001639847.1 CDS Mext_2381 NC_010172.1 2633704 2634201 D PFAM: protein of unknown function DUF983; KEGG: rpa:RPA3126 hypothetical protein; hypothetical protein 2633704..2634201 Methylobacterium extorquens PA1 5832988 YP_001639848.1 CDS Mext_2382 NC_010172.1 2634152 2634925 D PFAM: NUDIX hydrolase; KEGG: xau:Xaut_3862 NUDIX hydrolase; NUDIX hydrolase 2634152..2634925 Methylobacterium extorquens PA1 5832989 YP_001639849.1 CDS Mext_2383 NC_010172.1 2635047 2637011 D KEGG: rpb:RPB_0608 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; type IV pilus assembly PilZ; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein 2635047..2637011 Methylobacterium extorquens PA1 5832990 YP_001639850.1 CDS Mext_2384 NC_010172.1 2637071 2637940 R KEGG: rpa:RPA3202 hypothetical protein; hypothetical protein complement(2637071..2637940) Methylobacterium extorquens PA1 5832991 YP_001639851.1 CDS Mext_2385 NC_010172.1 2637947 2638996 R PFAM: domain of unknown function DUF1730; KEGG: mlo:mlr4636 iron-sulfur cluster binding protein; hypothetical protein complement(2637947..2638996) Methylobacterium extorquens PA1 5831677 YP_001639852.1 CDS Mext_2386 NC_010172.1 2639122 2639814 R PFAM: Glutathione S-transferase domain; KEGG: xau:Xaut_1808 glutathione S-transferase domain; glutathione S-transferase domain-containing protein complement(2639122..2639814) Methylobacterium extorquens PA1 5831678 YP_001639853.1 CDS Mext_2387 NC_010172.1 2640042 2640893 D KEGG: atc:AGR_C_505 undecaprenyl-diphosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase 2640042..2640893 Methylobacterium extorquens PA1 5831679 YP_001639854.1 CDS Mext_2388 NC_010172.1 2641042 2642859 D PFAM: methylmalonyl-CoA mutase; KEGG: bra:BRADO2682 methylmalonyl-CoA mutase small subunit (MCM-beta); methylmalonyl-CoA mutase 2641042..2642859 Methylobacterium extorquens PA1 5831680 YP_001639855.1 CDS Mext_2389 NC_010172.1 2642967 2643359 D KEGG: rpb:RPB_0042 hypothetical protein; hypothetical protein 2642967..2643359 Methylobacterium extorquens PA1 5831809 YP_001639856.1 CDS Mext_2390 NC_010172.1 2643534 2644001 D hypothetical protein 2643534..2644001 Methylobacterium extorquens PA1 5831810 YP_001639857.1 CDS Mext_2391 NC_010172.1 2644024 2644467 R KEGG: xau:Xaut_4374 hypothetical protein; hypothetical protein complement(2644024..2644467) Methylobacterium extorquens PA1 5831811 YP_001639858.1 CDS Mext_2392 NC_010172.1 2644653 2645204 D KEGG: rru:Rru_B0038 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 2644653..2645204 Methylobacterium extorquens PA1 5831812 YP_001639859.1 CDS Mext_2393 NC_010172.1 2645338 2646396 D TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ret:RHE_CH01514 dTDP-glucose-4,6-dehydratase protein; dTDP-glucose 4,6-dehydratase 2645338..2646396 Methylobacterium extorquens PA1 5832125 YP_001639860.1 CDS Mext_2394 NC_010172.1 2646399 2647289 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ccr:CC_1140 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 2646399..2647289 Methylobacterium extorquens PA1 5832126 YP_001639861.1 CDS Mext_2395 NC_010172.1 2647306 2648196 D TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mmw:Mmwyl1_0838 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 2647306..2648196 Methylobacterium extorquens PA1 5832127 YP_001639862.1 CDS Mext_2396 NC_010172.1 2648332 2648991 R KEGG: swi:Swit_2155 hypothetical protein; hypothetical protein complement(2648332..2648991) Methylobacterium extorquens PA1 5832128 YP_001639863.1 CDS Mext_2397 NC_010172.1 2649061 2649930 R PFAM: secretion protein HlyD family protein; KEGG: sil:SPO2718 hypothetical protein; secretion protein HlyD family protein complement(2649061..2649930) Methylobacterium extorquens PA1 5833149 YP_001639864.1 CDS secA NC_010172.1 2649944 2651980 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA complement(2649944..2651980) Methylobacterium extorquens PA1 5833150 YP_001639865.1 CDS Mext_2399 NC_010172.1 2651973 2654120 R KEGG: sil:SPO2714 peptidase, M50 family; M50 family peptidase complement(2651973..2654120) Methylobacterium extorquens PA1 5833151 YP_001639866.1 CDS Mext_2400 NC_010172.1 2654132 2656018 R PFAM: GAF domain protein; KEGG: sil:SPO2715 GAF domain protein; GAF domain-containing protein complement(2654132..2656018) Methylobacterium extorquens PA1 5833152 YP_001639867.1 CDS Mext_2401 NC_010172.1 2656102 2656425 R KEGG: mgm:Mmc1_2178 hypothetical protein; hypothetical protein complement(2656102..2656425) Methylobacterium extorquens PA1 5833843 YP_001639868.1 CDS Mext_2402 NC_010172.1 2656785 2657837 D PFAM: O-methyltransferase family 2; Methyltransferase type 11; Methyltransferase type 12; KEGG: stp:Strop_0204 O-methyltransferase, family 2; type 12 methyltransferase 2656785..2657837 Methylobacterium extorquens PA1 5833844 YP_001639869.1 CDS Mext_2403 NC_010172.1 2657834 2658493 D KEGG: lpp:lpp0585 hypothetical protein; hypothetical protein 2657834..2658493 Methylobacterium extorquens PA1 5833845 YP_001639870.1 CDS Mext_2404 NC_010172.1 2658490 2660910 D PFAM: FAD dependent oxidoreductase; tryptophan halogenase; KEGG: ccr:CC_0972 tryptophan halogenase, putative; tryptophan halogenase 2658490..2660910 Methylobacterium extorquens PA1 5833846 YP_001639871.1 CDS Mext_2405 NC_010172.1 2660907 2661782 D hypothetical protein 2660907..2661782 Methylobacterium extorquens PA1 5834056 YP_001639872.1 CDS Mext_2406 NC_010172.1 2661800 2662732 D PFAM: Radical SAM domain protein; KEGG: mbu:Mbur_1233 Fe-S protein, radical SAM family; radical SAM domain-containing protein 2661800..2662732 Methylobacterium extorquens PA1 5834057 YP_001639873.1 CDS Mext_2407 NC_010172.1 2662864 2663793 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rpb:RPB_3438 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein complement(2662864..2663793) Methylobacterium extorquens PA1 5834058 YP_001639874.1 CDS Mext_2408 NC_010172.1 2664728 2665528 D PFAM: SapC family protein; KEGG: pin:Ping_3347 SapC family protein; SapC family protein 2664728..2665528 Methylobacterium extorquens PA1 5834059 YP_001639875.1 CDS Mext_2409 NC_010172.1 2665703 2713198 D KEGG: cch:Cag_0616 parallel beta-helix repeat; hypothetical protein 2665703..2713198 Methylobacterium extorquens PA1 5834167 YP_001639876.1 CDS Mext_2410 NC_010172.1 2713375 2714190 D hypothetical protein 2713375..2714190 Methylobacterium extorquens PA1 5834168 YP_001639877.1 CDS Mext_2411 NC_010172.1 2714195 2714986 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: noc:Noc_0994 methylase involved in ubiquinone/menaquinone biosynthesis-like; type 11 methyltransferase 2714195..2714986 Methylobacterium extorquens PA1 5834169 YP_001639878.1 CDS Mext_2412 NC_010172.1 2715125 2716504 D PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pca:Pcar_2487 Fe-S oxidoreductase; radical SAM domain-containing protein 2715125..2716504 Methylobacterium extorquens PA1 5834170 YP_001639879.1 CDS Mext_2413 NC_010172.1 2716501 2717814 D PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gme:Gmet_0101 radical SAM; radical SAM domain-containing protein 2716501..2717814 Methylobacterium extorquens PA1 5834144 YP_001639880.1 CDS Mext_2414 NC_010172.1 2717922 2719361 R PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: sil:SPO1361 multicopper oxidase domain protein; multicopper oxidase type 3 complement(2717922..2719361) Methylobacterium extorquens PA1 5834145 YP_001639881.1 CDS tig NC_010172.1 2719743 2721179 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2719743..2721179 Methylobacterium extorquens PA1 5834147 YP_001639882.1 CDS clpP NC_010172.1 2721311 2721937 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2721311..2721937 Methylobacterium extorquens PA1 5834042 YP_001639883.1 CDS clpX NC_010172.1 2722189 2723460 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2722189..2723460 Methylobacterium extorquens PA1 5834043 YP_001639884.1 CDS Mext_2418 NC_010172.1 2723728 2726148 D KEGG: xau:Xaut_3593 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 2723728..2726148 Methylobacterium extorquens PA1 5834044 YP_001639885.1 CDS Mext_2419 NC_010172.1 2726450 2726716 D hypothetical protein 2726450..2726716 Methylobacterium extorquens PA1 5834617 YP_001639886.1 CDS Mext_2420 NC_010172.1 2727044 2727325 D hypothetical protein 2727044..2727325 Methylobacterium extorquens PA1 5834618 YP_001639887.1 CDS Mext_2421 NC_010172.1 2727861 2728118 D hypothetical protein 2727861..2728118 Methylobacterium extorquens PA1 5833017 YP_001639888.1 CDS Mext_2422 NC_010172.1 2728211 2729062 D KEGG: gox:GOX0496 hypothetical protein; hypothetical protein 2728211..2729062 Methylobacterium extorquens PA1 5833018 YP_001639889.1 CDS Mext_2423 NC_010172.1 2729223 2730836 D KEGG: gbe:GbCGDNIH1_0228 glycosyltransferase; glycosyltransferase 2729223..2730836 Methylobacterium extorquens PA1 5833019 YP_001639890.1 CDS Mext_2424 NC_010172.1 2731005 2731247 D hypothetical protein 2731005..2731247 Methylobacterium extorquens PA1 5833020 YP_001639891.1 CDS Mext_2425 NC_010172.1 2731394 2731675 R hypothetical protein complement(2731394..2731675) Methylobacterium extorquens PA1 5834075 YP_001639892.1 CDS Mext_2426 NC_010172.1 2732015 2733526 R PFAM: Hemolysin-type calcium-binding region; KEGG: ana:alr7304 similar to hlyA; hemolysin-type calcium-binding protein complement(2732015..2733526) Methylobacterium extorquens PA1 5834076 YP_001639893.1 CDS Mext_2427 NC_010172.1 2733710 2734738 R PFAM: terminase large subunit; KEGG: nmu:Nmul_A1463 phage terminase, large subunit, PBSX; terminase large subunit complement(2733710..2734738) Methylobacterium extorquens PA1 5834077 YP_001639894.1 CDS Mext_2428 NC_010172.1 2734728 2735012 R KEGG: bvi:Bcep1808_4528 hypothetical protein; hypothetical protein complement(2734728..2735012) Methylobacterium extorquens PA1 5834078 YP_001639895.1 CDS Mext_2429 NC_010172.1 2735121 2735441 R hypothetical protein complement(2735121..2735441) Methylobacterium extorquens PA1 5834095 YP_001639896.1 CDS Mext_2430 NC_010172.1 2735496 2735765 R hypothetical protein complement(2735496..2735765) Methylobacterium extorquens PA1 5834096 YP_001639897.1 CDS Mext_2431 NC_010172.1 2735765 2735974 R hypothetical protein complement(2735765..2735974) Methylobacterium extorquens PA1 5834097 YP_001639898.1 CDS Mext_2432 NC_010172.1 2735998 2736843 R PFAM: Resolvase domain; Recombinase; KEGG: fra:Francci3_1684 resolvase-like; resolvase domain-containing protein complement(2735998..2736843) Methylobacterium extorquens PA1 5834098 YP_001639899.1 CDS Mext_2433 NC_010172.1 2737000 2737386 R hypothetical protein complement(2737000..2737386) Methylobacterium extorquens PA1 5834007 YP_001639900.1 CDS Mext_2434 NC_010172.1 2737424 2738287 R hypothetical protein complement(2737424..2738287) Methylobacterium extorquens PA1 5834008 YP_001639901.1 CDS Mext_2435 NC_010172.1 2738713 2738952 D hypothetical protein 2738713..2738952 Methylobacterium extorquens PA1 5834009 YP_001639902.1 CDS Mext_2436 NC_010172.1 2739250 2740155 D PFAM: CMP/dCMP deaminase zinc-binding; KEGG: cbd:COXBU7E912_1655 cytidine/deoxycytidylate deaminase family protein; zinc-binding CMP/dCMP deaminase 2739250..2740155 Methylobacterium extorquens PA1 5834010 YP_001639903.1 CDS Mext_2437 NC_010172.1 2740331 2740720 R hypothetical protein complement(2740331..2740720) Methylobacterium extorquens PA1 5834151 YP_001639904.1 CDS Mext_2438 NC_010172.1 2741033 2741464 R PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator; ROSMUCR transcriptional regulator complement(2741033..2741464) Methylobacterium extorquens PA1 5834152 YP_001639905.1 CDS Mext_2439 NC_010172.1 2741517 2741975 R hypothetical protein complement(2741517..2741975) Methylobacterium extorquens PA1 5834153 YP_001639906.1 CDS Mext_2440 NC_010172.1 2741972 2742718 R hypothetical protein complement(2741972..2742718) Methylobacterium extorquens PA1 5834154 YP_001639907.1 CDS Mext_2441 NC_010172.1 2743411 2744034 R KEGG: atc:AGR_C_790 hypothetical protein; hypothetical protein complement(2743411..2744034) Methylobacterium extorquens PA1 5832340 YP_001639908.1 CDS Mext_2442 NC_010172.1 2744031 2744498 R hypothetical protein complement(2744031..2744498) Methylobacterium extorquens PA1 5832341 YP_001639909.1 CDS Mext_2443 NC_010172.1 2744502 2745029 R KEGG: rle:RL4065 hypothetical protein; hypothetical protein complement(2744502..2745029) Methylobacterium extorquens PA1 5832342 YP_001639910.1 CDS Mext_2444 NC_010172.1 2745101 2745421 R hypothetical protein complement(2745101..2745421) Methylobacterium extorquens PA1 5832343 YP_001639911.1 CDS Mext_2445 NC_010172.1 2745424 2745771 R KEGG: xau:Xaut_4477 hypothetical protein; hypothetical protein complement(2745424..2745771) Methylobacterium extorquens PA1 5834851 YP_001639912.1 CDS Mext_2446 NC_010172.1 2745794 2746285 R hypothetical protein complement(2745794..2746285) Methylobacterium extorquens PA1 5834852 YP_001639913.1 CDS Mext_2447 NC_010172.1 2747345 2747602 D hypothetical protein 2747345..2747602 Methylobacterium extorquens PA1 5834853 YP_001639914.1 CDS Mext_2448 NC_010172.1 2747580 2748287 R hypothetical protein complement(2747580..2748287) Methylobacterium extorquens PA1 5834854 YP_001639915.1 CDS Mext_2449 NC_010172.1 2748383 2748649 D KEGG: ret:RHE_CH00634 hypothetical protein; hypothetical protein 2748383..2748649 Methylobacterium extorquens PA1 5835244 YP_001639916.1 CDS Mext_2450 NC_010172.1 2748809 2749534 R hypothetical protein complement(2748809..2749534) Methylobacterium extorquens PA1 5835245 YP_001639917.1 CDS Mext_2451 NC_010172.1 2749594 2750400 R PFAM: Resolvase domain; KEGG: bbt:BBta_6747 putative resolvase (site-specific recombinase); resolvase domain-containing protein complement(2749594..2750400) Methylobacterium extorquens PA1 5835246 YP_001639918.1 CDS Mext_2452 NC_010172.1 2750750 2751136 R PFAM: helix-turn-helix HxlR type; KEGG: eca:ECA2934 putative transcriptional regulator; helix-turn-helix HxlR type protein complement(2750750..2751136) Methylobacterium extorquens PA1 5835247 YP_001639919.1 CDS Mext_2453 NC_010172.1 2751242 2751988 D PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: smd:Smed_5815 NADP oxidoreductase coenzyme F420-dependent; coenzyme F420-dependent NADP oxidoreductase 2751242..2751988 Methylobacterium extorquens PA1 5834482 YP_001639920.1 CDS Mext_2454 NC_010172.1 2752024 2753016 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pfo:Pfl_2299 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase 2752024..2753016 Methylobacterium extorquens PA1 5834483 YP_001639921.1 CDS Mext_2455 NC_010172.1 2753200 2753475 R KEGG: dps:DP0911 hypothetical protein; hypothetical protein complement(2753200..2753475) Methylobacterium extorquens PA1 5834484 YP_001639922.1 CDS Mext_2456 NC_010172.1 2753510 2754013 R hypothetical protein complement(2753510..2754013) Methylobacterium extorquens PA1 5834485 YP_001639923.1 CDS Mext_2457 NC_010172.1 2754127 2756589 R KEGG: nha:Nham_2527 hypothetical protein; hypothetical protein complement(2754127..2756589) Methylobacterium extorquens PA1 5834086 YP_001639924.1 CDS Mext_2458 NC_010172.1 2756673 2756945 R hypothetical protein complement(2756673..2756945) Methylobacterium extorquens PA1 5834087 YP_001639925.1 CDS Mext_2459 NC_010172.1 2757208 2757498 D hypothetical protein 2757208..2757498 Methylobacterium extorquens PA1 5834088 YP_001639926.1 CDS Mext_2460 NC_010172.1 2757640 2758887 R PFAM: integrase family protein; KEGG: rpc:RPC_3867 phage integrase; integrase family protein complement(2757640..2758887) Methylobacterium extorquens PA1 5834089 YP_001639927.1 CDS Mext_2461 NC_010172.1 2760064 2761236 D PFAM: glycosyl transferase group 1; KEGG: swi:Swit_4003 glycosyl transferase, group 1; group 1 glycosyl transferase 2760064..2761236 Methylobacterium extorquens PA1 5835706 YP_001639928.1 CDS Mext_2462 NC_010172.1 2761248 2762195 R KEGG: pla:Plav_2197 hypothetical protein; hypothetical protein complement(2761248..2762195) Methylobacterium extorquens PA1 5835707 YP_001639929.1 CDS Mext_2463 NC_010172.1 2762195 2763217 R PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: psa:PST_0141 modification methylase, HemK family; methyltransferase small complement(2762195..2763217) Methylobacterium extorquens PA1 5835708 YP_001639930.1 CDS Mext_2464 NC_010172.1 2763220 2763975 R PFAM: Protein of unknown function YqcI/YcgG; KEGG: rpb:RPB_1618 hypothetical protein; hypothetical protein complement(2763220..2763975) Methylobacterium extorquens PA1 5835709 YP_001639931.1 CDS Mext_2465 NC_010172.1 2764252 2764848 R KEGG: pla:Plav_3249 hypothetical protein; hypothetical protein complement(2764252..2764848) Methylobacterium extorquens PA1 5835624 YP_001639932.1 CDS Mext_2466 NC_010172.1 2764976 2767042 D TIGRFAM: oligopeptide transporters, OPT superfamily; oligopeptide transporter, OPT family; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: reh:H16_A3260 oligopeptide transporter; OPT family oligopeptide transporter 2764976..2767042 Methylobacterium extorquens PA1 5835625 YP_001639933.1 CDS Mext_2467 NC_010172.1 2767111 2767905 D PFAM: ABC-2 type transporter; KEGG: xau:Xaut_3810 ABC-2 type transporter; ABC-2 type transporter 2767111..2767905 Methylobacterium extorquens PA1 5835626 YP_001639934.1 CDS Mext_2468 NC_010172.1 2768495 2769196 R hypothetical protein complement(2768495..2769196) Methylobacterium extorquens PA1 5835607 YP_001639935.1 CDS Mext_2469 NC_010172.1 2769432 2770625 D PFAM: ribonuclease BN; KEGG: bra:BRADO2085 conserved hypothetical protein; putative membrane protein; putative ribonuclease; ribonuclease BN 2769432..2770625 Methylobacterium extorquens PA1 5835608 YP_001639936.1 CDS Mext_2470 NC_010172.1 2770973 2771365 R KEGG: osa:4337187 Os04g0644400; hypothetical protein complement(2770973..2771365) Methylobacterium extorquens PA1 5835609 YP_001639937.1 CDS Mext_2471 NC_010172.1 2771870 2775013 D KEGG: xau:Xaut_2377 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; DNA polymerase I 2771870..2775013 Methylobacterium extorquens PA1 5835636 YP_001639938.1 CDS Mext_2472 NC_010172.1 2775197 2775859 R PFAM: Endonuclease V; KEGG: mca:MCA0045 endonuclease V; deoxyribonuclease V complement(2775197..2775859) Methylobacterium extorquens PA1 5835637 YP_001639939.1 CDS Mext_2473 NC_010172.1 2775873 2776970 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(2775873..2776970) Methylobacterium extorquens PA1 5835638 YP_001639940.1 CDS Mext_2474 NC_010172.1 2777050 2777682 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(2777050..2777682) Methylobacterium extorquens PA1 5835639 YP_001639941.1 CDS Mext_2475 NC_010172.1 2777784 2778470 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc complement(2777784..2778470) Methylobacterium extorquens PA1 5835858 YP_001639942.1 CDS Mext_2476 NC_010172.1 2778751 2779233 R KEGG: rpd:RPD_3516 hypothetical protein; hypothetical protein complement(2778751..2779233) Methylobacterium extorquens PA1 5835859 YP_001639943.1 CDS Mext_2477 NC_010172.1 2779598 2779795 D PFAM: Flp/Fap pilin component; KEGG: smd:Smed_5123 Flp/Fap pilin component; Flp/Fap pilin component 2779598..2779795 Methylobacterium extorquens PA1 5835860 YP_001639944.1 CDS Mext_2478 NC_010172.1 2780003 2780512 D PFAM: peptidase A24A prepilin type IV; KEGG: bbt:BBta_7029 putative type IV prepilin peptidase, CpaA; peptidase A24A prepilin type IV 2780003..2780512 Methylobacterium extorquens PA1 5835861 YP_001639945.1 CDS Mext_2479 NC_010172.1 2780706 2781491 D TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: rpc:RPC_3712 Flp pilus assembly CpaB; Flp pilus assembly protein CpaB 2780706..2781491 Methylobacterium extorquens PA1 5835262 YP_001639946.1 CDS Mext_2480 NC_010172.1 2781503 2783011 D PFAM: type II and III secretion system protein; transport-associated; KEGG: bbt:BBta_7031 putative pilus assembly protein CpaC; type II and III secretion system protein 2781503..2783011 Methylobacterium extorquens PA1 5835263 YP_001639947.1 CDS Mext_2481 NC_010172.1 2783037 2783783 D TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; PFAM: Pilus biogenesis CpaD family protein; KEGG: nha:Nham_0390 pilus assembly protein CpaD; pilus biogenesis lipoprotein CpaD 2783037..2783783 Methylobacterium extorquens PA1 5835264 YP_001639948.1 CDS Mext_2482 NC_010172.1 2783869 2785113 D KEGG: rpc:RPC_3715 putative pilus assembly protein CpaE; putative pilus assembly protein CpaE 2783869..2785113 Methylobacterium extorquens PA1 5835265 YP_001639949.1 CDS Mext_2483 NC_010172.1 2785161 2786609 D PFAM: type II secretion system protein E; KEGG: bja:bll1436 pilus assembly protein; type II secretion system protein E 2785161..2786609 Methylobacterium extorquens PA1 5835835 YP_001639950.1 CDS Mext_2484 NC_010172.1 2786606 2787577 D PFAM: type II secretion system protein; KEGG: bbt:BBta_7035 putative pilus assembly protein; type II secretion system protein 2786606..2787577 Methylobacterium extorquens PA1 5835836 YP_001639951.1 CDS Mext_2485 NC_010172.1 2787626 2788597 D PFAM: type II secretion system protein; KEGG: rpa:RPA3683 hypothetical protein; type II secretion system protein 2787626..2788597 Methylobacterium extorquens PA1 5835837 YP_001639952.1 CDS Mext_2486 NC_010172.1 2788638 2789696 D PFAM: MaoC domain protein dehydratase; KEGG: nwi:Nwi_2507 MaoC-like dehydratase; dehydratase 2788638..2789696 Methylobacterium extorquens PA1 5835838 YP_001639953.1 CDS Mext_2487 NC_010172.1 2789693 2790955 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: gbe:GbCGDNIH1_2292 transporter, MFS superfamily; major facilitator transporter 2789693..2790955 Methylobacterium extorquens PA1 5831427 YP_001639954.1 CDS Mext_2488 NC_010172.1 2791097 2791522 D PFAM: OsmC family protein; KEGG: gbe:GbCGDNIH1_0067 organic hydroperoxide resistance protein; OsmC family protein 2791097..2791522 Methylobacterium extorquens PA1 5831428 YP_001639955.1 CDS Mext_2489 NC_010172.1 2792494 2793075 R PFAM: CoA-binding domain protein; KEGG: rpb:RPB_2668 CoA-binding; CoA-binding domain-containing protein complement(2792494..2793075) Methylobacterium extorquens PA1 5831429 YP_001639956.1 CDS Mext_2490 NC_010172.1 2793084 2793533 D PFAM: thioesterase superfamily protein; KEGG: pla:Plav_2936 thioesterase superfamily protein; thioesterase superfamily protein 2793084..2793533 Methylobacterium extorquens PA1 5831430 YP_001639957.1 CDS Mext_2491 NC_010172.1 2793589 2794908 R PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_1628 major facilitator superfamily MFS_1; major facilitator transporter complement(2793589..2794908) Methylobacterium extorquens PA1 5831181 YP_001639958.1 CDS Mext_2492 NC_010172.1 2795380 2796804 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_A4297 putative diguanylate cyclase (GGDEF domain); diguanylate cyclase 2795380..2796804 Methylobacterium extorquens PA1 5831182 YP_001639959.1 CDS Mext_2493 NC_010172.1 2796877 2797296 R PFAM: BA14K family protein; KEGG: rpb:RPB_1022 BA14K-like; BA14K family protein complement(2796877..2797296) Methylobacterium extorquens PA1 5831183 YP_001639960.1 CDS Mext_2494 NC_010172.1 2797444 2798355 R KEGG: smd:Smed_5683 conserved hypothetical membrane spanning protein; hypothetical protein complement(2797444..2798355) Methylobacterium extorquens PA1 5831184 YP_001639961.1 CDS Mext_2495 NC_010172.1 2798403 2798735 R PFAM: CsbD family protein; KEGG: bra:BRADO1086 conserved hypothetical protein, hypothetical UPF0337 protein; CsbD family protein complement(2798403..2798735) Methylobacterium extorquens PA1 5832708 YP_001639962.1 CDS Mext_2496 NC_010172.1 2799053 2799418 D KEGG: rpa:RPA0207 hypothetical protein; hypothetical protein 2799053..2799418 Methylobacterium extorquens PA1 5832709 YP_001639963.1 CDS Mext_2497 NC_010172.1 2799528 2800157 D PFAM: 3'-5' exonuclease; KEGG: rpc:RPC_0419 3'-5' exonuclease; 3'-5' exonuclease 2799528..2800157 Methylobacterium extorquens PA1 5832710 YP_001639964.1 CDS Mext_2498 NC_010172.1 2800428 2801186 D PFAM: protein of unknown function DUF1239; KEGG: nwi:Nwi_0172 hypothetical protein; hypothetical protein 2800428..2801186 Methylobacterium extorquens PA1 5832711 YP_001639965.1 CDS Mext_2499 NC_010172.1 2801183 2801911 D PFAM: OstA family protein; KEGG: rpa:RPA0048 hypothetical protein; OstA family protein 2801183..2801911 Methylobacterium extorquens PA1 5832511 YP_001639966.1 CDS Mext_2500 NC_010172.1 2801929 2802798 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nwi:Nwi_0174 ABC transporter, ATPase subunit; ABC transporter-like protein 2801929..2802798 Methylobacterium extorquens PA1 5832512 YP_001639967.1 CDS Mext_2501 NC_010172.1 2803372 2804907 D TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: bra:BRADO0113 RNA polymerase sigma-54 factor; RNA polymerase sigma-54 factor, RpoN 2803372..2804907 Methylobacterium extorquens PA1 5832513 YP_001639968.1 CDS Mext_2502 NC_010172.1 2805021 2805629 D TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: rpc:RPC_0414 sigma 54 modulation protein/ribosomal protein S30EA; ribosomal subunit interface protein 2805021..2805629 Methylobacterium extorquens PA1 5832514 YP_001639969.1 CDS Mext_2503 NC_010172.1 2805827 2806294 D TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: xau:Xaut_2034 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 2805827..2806294 Methylobacterium extorquens PA1 5833203 YP_001639970.1 CDS Mext_2504 NC_010172.1 2806296 2806625 D hypothetical protein 2806296..2806625 Methylobacterium extorquens PA1 5833204 YP_001639971.1 CDS Mext_2505 NC_010172.1 2806761 2807774 D KEGG: rpc:RPC_1250 magnesium chelatase ATPase subunit I; TIGRFAM: magnesium chelatase ATPase subunit I; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; magnesium chelatase ATPase subunit I 2806761..2807774 Methylobacterium extorquens PA1 5833205 YP_001639972.1 CDS Mext_2506 NC_010172.1 2807797 2808435 R catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(2807797..2808435) Methylobacterium extorquens PA1 5833206 YP_001639973.1 CDS Mext_2507 NC_010172.1 2808572 2809375 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(2808572..2809375) Methylobacterium extorquens PA1 5831218 YP_001639974.1 CDS Mext_2508 NC_010172.1 2809450 2810145 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: gbe:GbCGDNIH1_0264 MarC family integral membrane protein; multiple antibiotic resistance (MarC)-like protein complement(2809450..2810145) Methylobacterium extorquens PA1 5831219 YP_001639975.1 CDS Mext_2509 NC_010172.1 2810183 2810917 R PFAM: Methyltransferase type 11; KEGG: xau:Xaut_2018 methyltransferase type 11; type 11 methyltransferase complement(2810183..2810917) Methylobacterium extorquens PA1 5831220 YP_001639976.1 CDS Mext_2510 NC_010172.1 2811149 2811928 D KEGG: smd:Smed_2552 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase 2811149..2811928 Methylobacterium extorquens PA1 5831221 YP_001639977.1 CDS Mext_2511 NC_010172.1 2812189 2812341 D KEGG: bja:bsr0189 hypothetical protein; hypothetical protein 2812189..2812341 Methylobacterium extorquens PA1 5833362 YP_001639978.1 CDS Mext_2512 NC_010172.1 2812338 2813324 D TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bja:blr0190 probable site-specific integrase/recombinase; tyrosine recombinase XerD 2812338..2813324 Methylobacterium extorquens PA1 5833363 YP_001639979.1 CDS Mext_2513 NC_010172.1 2813495 2814712 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: psa:PST_2767 GGDEF domain protein; diguanylate cyclase 2813495..2814712 Methylobacterium extorquens PA1 5833364 YP_001639980.1 CDS Mext_2514 NC_010172.1 2814846 2817077 D PFAM: glycoside hydrolase family 3 domain protein; KEGG: sus:Acid_6936 glycoside hydrolase, family 3 domain protein; glycoside hydrolase family 3 2814846..2817077 Methylobacterium extorquens PA1 5833365 YP_001639981.1 CDS Mext_2515 NC_010172.1 2817084 2818286 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_2635 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2817084..2818286) Methylobacterium extorquens PA1 5832072 YP_001639982.1 CDS Mext_2516 NC_010172.1 2818324 2818848 R KEGG: sal:Sala_1501 hypothetical protein; hypothetical protein complement(2818324..2818848) Methylobacterium extorquens PA1 5832073 YP_001639983.1 CDS Mext_2517 NC_010172.1 2818845 2820029 R PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: xau:Xaut_4557 aminotransferase class I and II; hypothetical protein complement(2818845..2820029) Methylobacterium extorquens PA1 5832074 YP_001639984.1 CDS Mext_2519 NC_010172.1 2820798 2822186 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bvi:Bcep1808_1113 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2820798..2822186 Methylobacterium extorquens PA1 5832344 YP_001639985.1 CDS Mext_2520 NC_010172.1 2822199 2825336 D PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_A2908 RND multidrug efflux pump, AcrB/AcrD/AcrF family; acriflavin resistance protein 2822199..2825336 Methylobacterium extorquens PA1 5832345 YP_001639986.1 CDS Mext_2521 NC_010172.1 2825333 2828647 D PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_A2909 RND multidrug efflux pump, AcrB/AcrD/AcrF family; acriflavin resistance protein 2825333..2828647 Methylobacterium extorquens PA1 5832346 YP_001639987.1 CDS Mext_2522 NC_010172.1 2828718 2830316 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A4489 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system outer membrane lipoprotein 2828718..2830316 Methylobacterium extorquens PA1 5832347 YP_001639988.1 CDS Mext_2523 NC_010172.1 2830431 2831939 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2830431..2831939 Methylobacterium extorquens PA1 5831232 YP_001639989.1 CDS Mext_2524 NC_010172.1 2832207 2833316 R KEGG: bbt:BBta_0340 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase complement(2832207..2833316) Methylobacterium extorquens PA1 5831233 YP_001639990.1 CDS Mext_2525 NC_010172.1 2833424 2833741 R hypothetical protein complement(2833424..2833741) Methylobacterium extorquens PA1 5831234 YP_001639991.1 CDS Mext_2526 NC_010172.1 2833907 2835517 D hypothetical protein 2833907..2835517 Methylobacterium extorquens PA1 5831235 YP_001639992.1 CDS Mext_2527 NC_010172.1 2835677 2837365 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rpe:RPE_1253 thiamine pyrophosphate enzyme TPP binding domain protein; thiamine pyrophosphate binding domain-containing protein 2835677..2837365 Methylobacterium extorquens PA1 5831389 YP_001639993.1 CDS Mext_2528 NC_010172.1 2837362 2837817 D PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: mxa:MXAN_4998 hypothetical protein; putative thiol-disulfide oxidoreductase DCC 2837362..2837817 Methylobacterium extorquens PA1 5831390 YP_001639994.1 CDS Mext_2529 NC_010172.1 2837989 2838951 R PFAM: Polyprenyl synthetase; KEGG: xau:Xaut_0205 polyprenyl synthetase; polyprenyl synthetase complement(2837989..2838951) Methylobacterium extorquens PA1 5831391 YP_001639995.1 CDS Mext_2530 NC_010172.1 2838988 2839773 D TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: sme:SMc03883 putative monofunctional biosynthetic peptidoglycan transglycosylase transmembrane protein; monofunctional biosynthetic peptidoglycan transglycosylase 2838988..2839773 Methylobacterium extorquens PA1 5831392 YP_001639996.1 CDS Mext_2531 NC_010172.1 2839778 2841181 R PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: rxy:Rxyl_0663 deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photo-lyase complement(2839778..2841181) Methylobacterium extorquens PA1 5831546 YP_001639997.1 CDS Mext_2532 NC_010172.1 2841811 2842920 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bra:BRADO4734 putative periplasmic mannitol-binding protein; putative Trap-T transport system, DctP subunit; TRAP dicarboxylate transporter subunit DctP complement(2841811..2842920) Methylobacterium extorquens PA1 5831547 YP_001639998.1 CDS Mext_2533 NC_010172.1 2843055 2843630 D KEGG: smd:Smed_5268 protein tyrosine phosphatase; protein tyrosine phosphatase 2843055..2843630 Methylobacterium extorquens PA1 5831548 YP_001639999.1 CDS Mext_2534 NC_010172.1 2843654 2844778 R PFAM: Extracellular ligand-binding receptor; KEGG: rru:Rru_A1746 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(2843654..2844778) Methylobacterium extorquens PA1 5831549 YP_001640000.1 CDS Mext_2535 NC_010172.1 2845097 2846350 R PFAM: polysaccharide export protein; KEGG: xau:Xaut_3820 polysaccharide export protein; polysaccharide export protein complement(2845097..2846350) Methylobacterium extorquens PA1 5833219 YP_001640001.1 CDS Mext_2536 NC_010172.1 2846467 2847936 R PFAM: sulfatase; KEGG: bte:BTH_I1340 putative capsular polysaccharide biosynthesis protein WcbQ; sulfatase complement(2846467..2847936) Methylobacterium extorquens PA1 5833220 YP_001640002.1 CDS Mext_2537 NC_010172.1 2847943 2849892 R PFAM: Capsule polysaccharide biosynthesis protein; KEGG: swi:Swit_2453 capsule polysaccharide biosynthesis protein; capsule polysaccharide biosynthesis protein complement(2847943..2849892) Methylobacterium extorquens PA1 5833221 YP_001640003.1 CDS Mext_2538 NC_010172.1 2850255 2851562 D PFAM: Capsule polysaccharide biosynthesis protein; KEGG: bbr:BB2922 capsular polysaccharide export protein; capsule polysaccharide biosynthesis protein 2850255..2851562 Methylobacterium extorquens PA1 5833222 YP_001640004.1 CDS Mext_2539 NC_010172.1 2851559 2852386 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mag:amb0744 dehydrogenase with different specificities; short-chain dehydrogenase/reductase SDR 2851559..2852386 Methylobacterium extorquens PA1 5835567 YP_001640005.1 CDS Mext_2540 NC_010172.1 2852386 2853243 D PFAM: formyl transferase domain protein; KEGG: cch:Cag_0487 methionyl-tRNA formyltransferase; formyl transferase domain-containing protein 2852386..2853243 Methylobacterium extorquens PA1 5835568 YP_001640006.1 CDS Mext_2541 NC_010172.1 2853247 2854527 R catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase complement(2853247..2854527) Methylobacterium extorquens PA1 5835569 YP_001640007.1 CDS Mext_2542 NC_010172.1 2854933 2855481 D TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: bja:blr2485 rieske iron-sulfur protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit 2854933..2855481 Methylobacterium extorquens PA1 5835570 YP_001640008.1 CDS Mext_2543 NC_010172.1 2855516 2856808 D PFAM: Cytochrome b/b6 domain; KEGG: xau:Xaut_2958 cytochrome b/b6 domain; cytochrome b/b6 domain-containing protein 2855516..2856808 Methylobacterium extorquens PA1 5833306 YP_001640009.1 CDS Mext_2544 NC_010172.1 2856830 2857723 D PFAM: cytochrome c1; KEGG: rpd:RPD_1303 cytochrome c1; cytochrome c1 2856830..2857723 Methylobacterium extorquens PA1 5833307 YP_001640010.1 CDS Mext_2545 NC_010172.1 2857935 2858810 D Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate; 5'-methylthioadenosine phosphorylase 2857935..2858810 Methylobacterium extorquens PA1 5833308 YP_001640011.1 CDS Mext_2546 NC_010172.1 2858915 2859178 R KEGG: rpb:RPB_0710 hypothetical protein; hypothetical protein complement(2858915..2859178) Methylobacterium extorquens PA1 5833309 YP_001640012.1 CDS Mext_2547 NC_010172.1 2859213 2860133 R PFAM: metallophosphoesterase; KEGG: mes:Meso_1478 twin-arginine translocation pathway signal; metallophosphoesterase complement(2859213..2860133) Methylobacterium extorquens PA1 5830954 YP_001640013.1 CDS hisB NC_010172.1 2860329 2860916 D catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 2860329..2860916 Methylobacterium extorquens PA1 5830955 YP_001640014.1 CDS Mext_2549 NC_010172.1 2860939 2861442 D KEGG: rpc:RPC_0305 hypothetical protein; hypothetical protein 2860939..2861442 Methylobacterium extorquens PA1 5830956 YP_001640015.1 CDS hisH NC_010172.1 2861439 2862101 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 2861439..2862101 Methylobacterium extorquens PA1 5830957 YP_001640016.1 CDS Mext_2551 NC_010172.1 2862143 2862910 D TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: rpe:RPE_0367 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 2862143..2862910 Methylobacterium extorquens PA1 5831876 YP_001640017.1 CDS Mext_2552 NC_010172.1 2862958 2863734 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 2862958..2863734 Methylobacterium extorquens PA1 5831877 YP_001640018.1 CDS Mext_2553 NC_010172.1 2863753 2864178 D TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: rle:RL0041 putative histidine biosynthesis bifunctional protein; phosphoribosyl-ATP diphosphatase 2863753..2864178 Methylobacterium extorquens PA1 5831878 YP_001640019.1 CDS Mext_2554 NC_010172.1 2864175 2865188 D catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 2864175..2865188 Methylobacterium extorquens PA1 5831879 YP_001640020.1 CDS Mext_2555 NC_010172.1 2865356 2867041 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bra:BRADO6566 putative methyl-accepting chemotaxis protein; chemotaxis sensory transducer protein complement(2865356..2867041) Methylobacterium extorquens PA1 5832407 YP_001640021.1 CDS Mext_2556 NC_010172.1 2867608 2868753 D KEGG: mmr:Mmar10_1844 hypothetical protein; hypothetical protein 2867608..2868753 Methylobacterium extorquens PA1 5832408 YP_001640022.1 CDS Mext_2557 NC_010172.1 2868882 2869466 D PFAM: response regulator receiver; KEGG: bja:bll7342 two-component response regulator; response regulator receiver 2868882..2869466 Methylobacterium extorquens PA1 5832409 YP_001640023.1 CDS Mext_2558 NC_010172.1 2870240 2870911 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bra:BRADO1451 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 2870240..2870911 Methylobacterium extorquens PA1 5832410 YP_001640024.1 CDS Mext_2559 NC_010172.1 2871032 2871358 R hypothetical protein complement(2871032..2871358) Methylobacterium extorquens PA1 5834963 YP_001640025.1 CDS Mext_2560 NC_010172.1 2871566 2872042 R TIGRFAM: phasin; PFAM: Phasin 2 family protein; KEGG: nha:Nham_1250 phasin 2; phasin complement(2871566..2872042) Methylobacterium extorquens PA1 5834964 YP_001640026.1 CDS Mext_2561 NC_010172.1 2872284 2874824 D KEGG: rpc:RPC_3942 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS sensor protein 2872284..2874824 Methylobacterium extorquens PA1 5834965 YP_001640027.1 CDS Mext_2562 NC_010172.1 2875084 2877033 D Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 2875084..2877033 Methylobacterium extorquens PA1 5834966 YP_001640028.1 CDS Mext_2563 NC_010172.1 2877245 2877631 D PFAM: protein of unknown function DUF485; KEGG: rme:Rmet_5782 protein of unknown function DUF485; hypothetical protein 2877245..2877631 Methylobacterium extorquens PA1 5832206 YP_001640029.1 CDS Mext_2564 NC_010172.1 2877628 2879313 D TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: mag:amb2727 predicted symporter; SSS family solute/sodium (Na+) symporter 2877628..2879313 Methylobacterium extorquens PA1 5832207 YP_001640030.1 CDS Mext_2565 NC_010172.1 2879572 2881308 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: xau:Xaut_3353 major facilitator superfamily MFS_1; major facilitator transporter 2879572..2881308 Methylobacterium extorquens PA1 5832208 YP_001640031.1 CDS Mext_2566 NC_010172.1 2881522 2883120 R KEGG: bra:BRADO0338 purine biosynthesis protein; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(2881522..2883120) Methylobacterium extorquens PA1 5832209 YP_001640032.1 CDS Mext_2567 NC_010172.1 2883327 2885039 R PFAM: Heparinase II/III family protein; KEGG: xau:Xaut_0039 heparinase II/III family protein; heparinase II/III family protein complement(2883327..2885039) Methylobacterium extorquens PA1 5831613 YP_001640033.1 CDS Mext_2568 NC_010172.1 2885227 2886075 R PFAM: Rhodanese domain protein; KEGG: sit:TM1040_2634 3-mercaptopyruvate sulfurtransferase; rhodanese domain-containing protein complement(2885227..2886075) Methylobacterium extorquens PA1 5831614 YP_001640034.1 CDS Mext_2569 NC_010172.1 2886347 2886583 D hypothetical protein 2886347..2886583 Methylobacterium extorquens PA1 5831615 YP_001640035.1 CDS Mext_2570 NC_010172.1 2886694 2887779 R PFAM: Hemolysin-type calcium-binding region; KEGG: dde:Dde_1416 hypothetical protein; hemolysin-type calcium-binding protein complement(2886694..2887779) Methylobacterium extorquens PA1 5831616 YP_001640036.1 CDS Mext_2571 NC_010172.1 2888454 2889986 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: nar:Saro_0237 DEAD/DEAH box helicase-like; DEAD/DEAH box helicase 2888454..2889986 Methylobacterium extorquens PA1 5831521 YP_001640037.1 CDS Mext_2572 NC_010172.1 2890161 2890346 D PFAM: protein of unknown function DUF1508; KEGG: bmb:BruAb1_0978 hypothetical protein; hypothetical protein 2890161..2890346 Methylobacterium extorquens PA1 5831522 YP_001640038.1 CDS Mext_2573 NC_010172.1 2890436 2890774 D KEGG: rpb:RPB_1415 hypothetical protein; hypothetical protein 2890436..2890774 Methylobacterium extorquens PA1 5831523 YP_001640039.1 CDS Mext_2575 NC_010172.1 2891213 2891632 D PFAM: thioesterase superfamily protein; KEGG: sil:SPO0440 thioesterase family protein; thioesterase superfamily protein 2891213..2891632 Methylobacterium extorquens PA1 5834855 YP_001640040.1 CDS Mext_2576 NC_010172.1 2891797 2892441 D PFAM: beta-lactamase domain protein; KEGG: bbt:BBta_7673 putative enzyme with metallo-hydrolase/oxidoreductase domain; beta-lactamase domain-containing protein 2891797..2892441 Methylobacterium extorquens PA1 5834856 YP_001640041.1 CDS Mext_2577 NC_010172.1 2892680 2895127 D KEGG: ret:RHE_CH00012 DNA gyrase subunit B protein; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 2892680..2895127 Methylobacterium extorquens PA1 5834857 YP_001640042.1 CDS Mext_2578 NC_010172.1 2895191 2896000 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mes:Meso_3107 RNA polymerase, sigma-24 subunit, ECF subfamily; sigma-70 family RNA polymerase sigma factor complement(2895191..2896000) Methylobacterium extorquens PA1 5834858 YP_001640043.1 CDS Mext_2579 NC_010172.1 2896317 2896742 D TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: bbt:BBta_4693 mechanosensitive channel; large conductance mechanosensitive channel protein 2896317..2896742 Methylobacterium extorquens PA1 5834903 YP_001640044.1 CDS Mext_2580 NC_010172.1 2896749 2897039 R hypothetical protein complement(2896749..2897039) Methylobacterium extorquens PA1 5834904 YP_001640045.1 CDS Mext_2581 NC_010172.1 2897331 2897744 R PFAM: protein of unknown function DUF1236; KEGG: rpb:RPB_0713 protein of unknown function DUF1236; hypothetical protein complement(2897331..2897744) Methylobacterium extorquens PA1 5834905 YP_001640046.1 CDS Mext_2582 NC_010172.1 2897927 2899108 R PFAM: aminotransferase class I and II; KEGG: mlo:mlr2987 aspartate aminotransferase; class I and II aminotransferase complement(2897927..2899108) Methylobacterium extorquens PA1 5834906 YP_001640047.1 CDS Mext_2583 NC_010172.1 2899229 2899420 R hypothetical protein complement(2899229..2899420) Methylobacterium extorquens PA1 5834709 YP_001640048.1 CDS Mext_2584 NC_010172.1 2899571 2900977 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpd:RPD_3883 ATP-binding region, ATPase-like; ATPase domain-containing protein complement(2899571..2900977) Methylobacterium extorquens PA1 5834710 YP_001640049.1 CDS Mext_2585 NC_010172.1 2900985 2901713 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xau:Xaut_2558 two component transcriptional regulator, winged helix family; response regulator receiver complement(2900985..2901713) Methylobacterium extorquens PA1 5834711 YP_001640050.1 CDS Mext_2586 NC_010172.1 2901713 2902288 R PFAM: regulatory protein MarR; KEGG: xau:Xaut_2557 transcriptional regulator, MarR family; regulatory protein MarR complement(2901713..2902288) Methylobacterium extorquens PA1 5834712 YP_001640051.1 CDS Mext_2587 NC_010172.1 2902497 2903384 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 2902497..2903384 Methylobacterium extorquens PA1 5834538 YP_001640052.1 CDS Mext_2588 NC_010172.1 2903486 2903749 D KEGG: rpc:RPC_0235 hypothetical protein; hypothetical protein 2903486..2903749 Methylobacterium extorquens PA1 5834539 YP_001640053.1 CDS Mext_2590 NC_010172.1 2904390 2905253 R KEGG: mlo:mll6900 hypothetical protein; hypothetical protein complement(2904390..2905253) Methylobacterium extorquens PA1 5834541 YP_001640054.1 CDS Mext_2591 NC_010172.1 2905398 2906879 R PFAM: multi antimicrobial extrusion protein MatE; KEGG: gox:GOX1028 hypothetical protein; multi anti extrusion protein MatE complement(2905398..2906879) Methylobacterium extorquens PA1 5833807 YP_001640055.1 CDS Mext_2592 NC_010172.1 2906872 2908770 R TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: xau:Xaut_4650 potassium efflux system protein; potassium efflux system protein complement(2906872..2908770) Methylobacterium extorquens PA1 5833808 YP_001640056.1 CDS ispH NC_010172.1 2909123 2910145 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2909123..2910145 Methylobacterium extorquens PA1 5833809 YP_001640057.1 CDS Mext_2594 NC_010172.1 2910220 2911209 D KEGG: xau:Xaut_2356 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: aminoglycoside phosphotransferase; homoserine kinase 2910220..2911209 Methylobacterium extorquens PA1 5833810 YP_001640058.1 CDS Mext_2595 NC_010172.1 2911258 2911740 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: xau:Xaut_2596 redoxin domain protein; redoxin domain-containing protein complement(2911258..2911740) Methylobacterium extorquens PA1 5831185 YP_001640059.1 CDS Mext_2596 NC_010172.1 2911864 2912472 D PFAM: protein of unknown function DUF179; KEGG: xau:Xaut_2594 protein of unknown function DUF179; hypothetical protein 2911864..2912472 Methylobacterium extorquens PA1 5831186 YP_001640060.1 CDS Mext_2597 NC_010172.1 2912510 2913586 R KEGG: bbt:BBta_4904 hypothetical protein; hypothetical protein complement(2912510..2913586) Methylobacterium extorquens PA1 5831187 YP_001640061.1 CDS alaS NC_010172.1 2913753 2916428 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(2913753..2916428) Methylobacterium extorquens PA1 5831188 YP_001640062.1 CDS Mext_2599 NC_010172.1 2916523 2917230 R PFAM: Helix-turn-helix type 11 domain protein; KEGG: atc:AGR_pAT_393 hypothetical protein; helix-turn-helix type 11 domain-containing protein complement(2916523..2917230) Methylobacterium extorquens PA1 5832992 YP_001640063.1 CDS Mext_2600 NC_010172.1 2917305 2917907 D KEGG: atc:AGR_pAT_394 glutathione S-transferase; glutathione S-transferase 2917305..2917907 Methylobacterium extorquens PA1 5832993 YP_001640064.1 CDS Mext_2601 NC_010172.1 2917989 2919089 R KEGG: bov:BOV_1165 protein RecA; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase; recA protein complement(2917989..2919089) Methylobacterium extorquens PA1 5832994 YP_001640065.1 CDS Mext_2602 NC_010172.1 2919344 2922055 R KEGG: bja:bll5808 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAS sensor protein complement(2919344..2922055) Methylobacterium extorquens PA1 5832995 YP_001640066.1 CDS Mext_2603 NC_010172.1 2922214 2923278 R TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: bja:bll5809 flagellar biosynthetic protein; flagellar biosynthetic protein FlhB complement(2922214..2923278) Methylobacterium extorquens PA1 5831040 YP_001640067.1 CDS Mext_2604 NC_010172.1 2923381 2924157 R TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: rpe:RPE_1555 flagellar biosynthetic protein FliR; flagellar biosynthetic protein FliR complement(2923381..2924157) Methylobacterium extorquens PA1 5831041 YP_001640068.1 CDS Mext_2605 NC_010172.1 2924203 2924469 R TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: bja:bsl5811 flagellar biosynthetic protein; flagellar biosynthetic protein FliQ complement(2924203..2924469) Methylobacterium extorquens PA1 5831042 YP_001640069.1 CDS Mext_2606 NC_010172.1 2924551 2924874 R TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: rpa:RPA3886 flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit FliE complement(2924551..2924874) Methylobacterium extorquens PA1 5831043 YP_001640070.1 CDS flgC NC_010172.1 2924880 2925290 R with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC complement(2924880..2925290) Methylobacterium extorquens PA1 5831899 YP_001640071.1 CDS flgB NC_010172.1 2925324 2925740 R with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar basal body rod protein FlgB complement(2925324..2925740) Methylobacterium extorquens PA1 5831900 YP_001640072.1 CDS Mext_2609 NC_010172.1 2925979 2927280 D KEGG: rpa:RPA3889 hypothetical protein; hypothetical protein 2925979..2927280 Methylobacterium extorquens PA1 5831901 YP_001640073.1 CDS Mext_2610 NC_010172.1 2927388 2928482 D PFAM: FAD dependent oxidoreductase; KEGG: bpd:BURPS668_0239 FAD-dependent oxidoreductase; FAD dependent oxidoreductase 2927388..2928482 Methylobacterium extorquens PA1 5831902 YP_001640074.1 CDS Mext_2611 NC_010172.1 2928485 2929324 R PFAM: transglutaminase domain protein; KEGG: gbe:GbCGDNIH1_1338 transglutaminase-like enzymes, putative cysteine proteases; transglutaminase domain-containing protein complement(2928485..2929324) Methylobacterium extorquens PA1 5831189 YP_001640075.1 CDS Mext_2612 NC_010172.1 2929522 2930328 D TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: bja:blr0469 heme exporter protein C; heme exporter protein CcmC 2929522..2930328 Methylobacterium extorquens PA1 5831190 YP_001640076.1 CDS Mext_2613 NC_010172.1 2930466 2930618 D TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD); heme exporter protein CcmD 2930466..2930618 Methylobacterium extorquens PA1 5831191 YP_001640077.1 CDS Mext_2614 NC_010172.1 2930615 2931235 D TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: rpc:RPC_0209 periplasmic protein thiol; periplasmic protein thiol--disulfide oxidoreductase DsbE 2930615..2931235 Methylobacterium extorquens PA1 5831192 YP_001640078.1 CDS Mext_2615 NC_010172.1 2931358 2932101 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gox:GOX1356 oxidoreductase, iron-sulphur binding subunit; hypothetical protein 2931358..2932101 Methylobacterium extorquens PA1 5833215 YP_001640079.1 CDS Mext_2616 NC_010172.1 2932098 2933672 D PFAM: protein of unknown function DUF162; KEGG: gox:GOX1357 putative electron transport protein; hypothetical protein 2932098..2933672 Methylobacterium extorquens PA1 5833216 YP_001640080.1 CDS Mext_2617 NC_010172.1 2933669 2934274 D PFAM: protein of unknown function DUF162; KEGG: gox:GOX1358 hypothetical protein; hypothetical protein 2933669..2934274 Methylobacterium extorquens PA1 5833217 YP_001640081.1 CDS Mext_2618 NC_010172.1 2934361 2935221 D PFAM: transglutaminase domain protein; KEGG: xau:Xaut_1588 transglutaminase domain protein; transglutaminase domain-containing protein 2934361..2935221 Methylobacterium extorquens PA1 5833218 YP_001640082.1 CDS rplM NC_010172.1 2935635 2936096 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 2935635..2936096 Methylobacterium extorquens PA1 5832361 YP_001640083.1 CDS rpsI NC_010172.1 2936099 2936584 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 2936099..2936584 Methylobacterium extorquens PA1 5832362 YP_001640084.1 CDS Mext_2621 NC_010172.1 2936667 2937041 D KEGG: bov:BOV_1408 hypothetical protein; hypothetical protein 2936667..2937041 Methylobacterium extorquens PA1 5832363 YP_001640085.1 CDS Mext_2622 NC_010172.1 2937123 2937332 D PFAM: TOBE domain protein; KEGG: oan:Oant_3365 TOBE domain protein; TOBE domain-containing protein 2937123..2937332 Methylobacterium extorquens PA1 5832364 YP_001640086.1 CDS Mext_2623 NC_010172.1 2937345 2938223 R PFAM: Aldose 1-epimerase; KEGG: bra:BRADO2126 hypothetical protein; aldose 1-epimerase complement(2937345..2938223) Methylobacterium extorquens PA1 5831910 YP_001640087.1 CDS Mext_2624 NC_010172.1 2938285 2940075 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hha:Hhal_0759 ABC transporter related; ABC transporter-like protein complement(2938285..2940075) Methylobacterium extorquens PA1 5831911 YP_001640088.1 CDS Mext_2625 NC_010172.1 2940442 2940915 D hypothetical protein 2940442..2940915 Methylobacterium extorquens PA1 5831912 YP_001640089.1 CDS Mext_2626 NC_010172.1 2941766 2942188 D KEGG: mpt:Mpe_A3498 hypothetical protein; hypothetical protein 2941766..2942188 Methylobacterium extorquens PA1 5831913 YP_001640090.1 CDS Mext_2627 NC_010172.1 2942754 2942972 R PFAM: protein of unknown function DUF329; KEGG: bra:BRADO6633 hypothetical protein; hypothetical protein complement(2942754..2942972) Methylobacterium extorquens PA1 5831223 YP_001640091.1 CDS Mext_2628 NC_010172.1 2942969 2943640 R TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: rpd:RPD_4276 maf protein; maf protein complement(2942969..2943640) Methylobacterium extorquens PA1 5831224 YP_001640092.1 CDS Mext_2629 NC_010172.1 2943940 2944248 R hypothetical protein complement(2943940..2944248) Methylobacterium extorquens PA1 5832881 YP_001640093.1 CDS Mext_2630 NC_010172.1 2944448 2944738 R hypothetical protein complement(2944448..2944738) Methylobacterium extorquens PA1 5832882 YP_001640094.1 CDS Mext_2631 NC_010172.1 2944903 2947215 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpd:RPD_0700 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(2944903..2947215) Methylobacterium extorquens PA1 5831412 YP_001640095.1 CDS Mext_2632 NC_010172.1 2948056 2948475 D hypothetical protein 2948056..2948475 Methylobacterium extorquens PA1 5831413 YP_001640096.1 CDS Mext_2633 NC_010172.1 2948606 2948869 D hypothetical protein 2948606..2948869 Methylobacterium extorquens PA1 5831414 YP_001640097.1 CDS Mext_2634 NC_010172.1 2948913 2949578 R TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: bbt:BBta_0380 heme ABC transporter (heme exporter protein B), permease protein (cytochrome c biogenesis); heme exporter protein CcmB complement(2948913..2949578) Methylobacterium extorquens PA1 5833223 YP_001640098.1 CDS Mext_2635 NC_010172.1 2949578 2950225 R KEGG: bja:blr0467 heme exporter protein A; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase; heme exporter protein CcmA complement(2949578..2950225) Methylobacterium extorquens PA1 5833224 YP_001640099.1 CDS Mext_2636 NC_010172.1 2950442 2950639 D hypothetical protein 2950442..2950639 Methylobacterium extorquens PA1 5833225 YP_001640100.1 CDS Mext_2637 NC_010172.1 2950946 2953645 D TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: xau:Xaut_3852 aconitate hydratase 1; aconitate hydratase 1 2950946..2953645 Methylobacterium extorquens PA1 5833226 YP_001640101.1 CDS Mext_2638 NC_010172.1 2953863 2954162 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rpc:RPC_2699 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 2953863..2954162 Methylobacterium extorquens PA1 5833227 YP_001640102.1 CDS Mext_2639 NC_010172.1 2954286 2954933 D TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: bbt:BBta_6524 putative maleylacetoacetate isomerase (MAAI); maleylacetoacetate isomerase 2954286..2954933 Methylobacterium extorquens PA1 5833602 YP_001640103.1 CDS Mext_2640 NC_010172.1 2955090 2956421 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gbe:GbCGDNIH1_1652 NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2955090..2956421 Methylobacterium extorquens PA1 5833603 YP_001640104.1 CDS Mext_2641 NC_010172.1 2956507 2956833 D PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: rpc:RPC_0686 ethyl tert-butyl ether degradation EthD; ethyl tert-butyl ether degradation EthD 2956507..2956833 Methylobacterium extorquens PA1 5833604 YP_001640105.1 CDS Mext_2642 NC_010172.1 2956833 2957144 D hypothetical protein 2956833..2957144 Methylobacterium extorquens PA1 5833605 YP_001640106.1 CDS Mext_2643 NC_010172.1 2957225 2958598 R PFAM: chemotaxis sensory transducer; KEGG: rpb:RPB_3522 methyl-accepting chemotaxis sensory transducer; chemotaxis sensory transducer protein complement(2957225..2958598) Methylobacterium extorquens PA1 5831423 YP_001640107.1 CDS Mext_2644 NC_010172.1 2959007 2960050 D KEGG: oan:Oant_0429 quinolinate synthetase complex, A subunit; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; quinolinate synthetase complex subunit A 2959007..2960050 Methylobacterium extorquens PA1 5831424 YP_001640108.1 CDS Mext_2645 NC_010172.1 2960050 2961579 D KEGG: gbe:GbCGDNIH1_0641 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; L-aspartate oxidase 2960050..2961579 Methylobacterium extorquens PA1 5831425 YP_001640109.1 CDS Mext_2646 NC_010172.1 2961572 2962432 D KEGG: mes:Meso_2555 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 2961572..2962432 Methylobacterium extorquens PA1 5831426 YP_001640110.1 CDS Mext_2647 NC_010172.1 2962670 2963416 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:blr7232 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 2962670..2963416 Methylobacterium extorquens PA1 5832422 YP_001640111.1 CDS Mext_2648 NC_010172.1 2963807 2964049 D KEGG: ccr:CC_1532 hypothetical protein; hypothetical protein 2963807..2964049 Methylobacterium extorquens PA1 5832423 YP_001640112.1 CDS Mext_2649 NC_010172.1 2964389 2964817 R PFAM: protein of unknown function DUF971; KEGG: oan:Oant_2230 protein of unknown function DUF971; hypothetical protein complement(2964389..2964817) Methylobacterium extorquens PA1 5832424 YP_001640113.1 CDS Mext_2650 NC_010172.1 2964960 2965994 D KEGG: oan:Oant_2231 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 2964960..2965994 Methylobacterium extorquens PA1 5832425 YP_001640114.1 CDS Mext_2651 NC_010172.1 2966001 2966921 R KEGG: bte:BTH_I2812 hypothetical protein; hypothetical protein complement(2966001..2966921) Methylobacterium extorquens PA1 5831258 YP_001640115.1 CDS Mext_2652 NC_010172.1 2966822 2968018 R PFAM: GSCFA domain protein; KEGG: swi:Swit_3997 GSCFA; GSCFA domain-containing protein complement(2966822..2968018) Methylobacterium extorquens PA1 5831259 YP_001640116.1 CDS Mext_2653 NC_010172.1 2968213 2969079 D PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rpa:RPA1973 3-hydroxyisobutyrate dehydrogenase; NAD-binding 6-phosphogluconate dehydrogenase 2968213..2969079 Methylobacterium extorquens PA1 5831260 YP_001640117.1 CDS miaA NC_010172.1 2969057 2970010 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(2969057..2970010) Methylobacterium extorquens PA1 5831261 YP_001640118.1 CDS Mext_2655 NC_010172.1 2970022 2970918 D KEGG: xau:Xaut_1660 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB 2970022..2970918 Methylobacterium extorquens PA1 5831059 YP_001640119.1 CDS Mext_2656 NC_010172.1 2971027 2972562 R KEGG: bja:bll6506 serine protease DO-like precursor; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do complement(2971027..2972562) Methylobacterium extorquens PA1 5831060 YP_001640120.1 CDS Mext_2657 NC_010172.1 2972674 2973624 R TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: xau:Xaut_1663 HflC protein; HflC protein complement(2972674..2973624) Methylobacterium extorquens PA1 5831061 YP_001640121.1 CDS Mext_2658 NC_010172.1 2973621 2974769 R TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: xau:Xaut_1664 HflK protein; HflK protein complement(2973621..2974769) Methylobacterium extorquens PA1 5831062 YP_001640122.1 CDS Mext_2659 NC_010172.1 2975061 2975561 R PFAM: dihydrofolate reductase region; KEGG: eba:ebA4414 dihydrofolate reductase; dihydrofolate reductase complement(2975061..2975561) Methylobacterium extorquens PA1 5831327 YP_001640123.1 CDS Mext_2660 NC_010172.1 2975561 2976355 R PFAM: thymidylate synthase; KEGG: xau:Xaut_3514 thymidylate synthase; thymidylate synthase complement(2975561..2976355) Methylobacterium extorquens PA1 5831328 YP_001640124.1 CDS Mext_2661 NC_010172.1 2976451 2977269 R PFAM: Abortive infection protein; KEGG: syr:SynRCC307_0866 predicted metal-dependent membrane protease; abortive infection protein complement(2976451..2977269) Methylobacterium extorquens PA1 5831329 YP_001640125.1 CDS Mext_2662 NC_010172.1 2977747 2978400 D PFAM: protein of unknown function DUF1321; KEGG: xau:Xaut_1418 protein of unknown function DUF1321; hypothetical protein 2977747..2978400 Methylobacterium extorquens PA1 5831330 YP_001640126.1 CDS Mext_2663 NC_010172.1 2978450 2979850 R PFAM: cytochrome P450; KEGG: mes:Meso_4009 cytochrome P450; cytochrome P450 complement(2978450..2979850) Methylobacterium extorquens PA1 5830929 YP_001640127.1 CDS Mext_2664 NC_010172.1 2979976 2981394 D TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; KEGG: xau:Xaut_1667 fumarate hydratase, class II; class II fumarate hydratase 2979976..2981394 Methylobacterium extorquens PA1 5830930 YP_001640128.1 CDS Mext_2665 NC_010172.1 2981455 2981643 D hypothetical protein 2981455..2981643 Methylobacterium extorquens PA1 5830931 YP_001640129.1 CDS Mext_2667 NC_010172.1 2981874 2982404 R PFAM: protein of unknown function DUF1052; KEGG: xau:Xaut_0307 protein of unknown function DUF1052; hypothetical protein complement(2981874..2982404) Methylobacterium extorquens PA1 5833300 YP_001640130.1 CDS Mext_2668 NC_010172.1 2982429 2983223 R PFAM: periplasmic binding protein; KEGG: bja:bll4160 probable substrate-binding protein; periplasmic binding protein complement(2982429..2983223) Methylobacterium extorquens PA1 5833301 YP_001640131.1 CDS Mext_2669 NC_010172.1 2983230 2983751 R KEGG: ypa:YPA_0241 hypothetical protein; hypothetical protein complement(2983230..2983751) Methylobacterium extorquens PA1 5833302 YP_001640132.1 CDS Mext_2670 NC_010172.1 2983970 2984821 D catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase 2983970..2984821 Methylobacterium extorquens PA1 5833303 YP_001640133.1 CDS Mext_2671 NC_010172.1 2984841 2985770 D TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: xau:Xaut_1326 phenazine biosynthesis protein PhzF family; PhzF family phenazine biosynthesis protein 2984841..2985770 Methylobacterium extorquens PA1 5835175 YP_001640134.1 CDS Mext_2672 NC_010172.1 2985760 2986491 D PFAM: NUDIX hydrolase; KEGG: rpe:RPE_2205 hypothetical protein; NUDIX hydrolase 2985760..2986491 Methylobacterium extorquens PA1 5835176 YP_001640135.1 CDS Mext_2673 NC_010172.1 2986503 2986829 R hypothetical protein complement(2986503..2986829) Methylobacterium extorquens PA1 5835177 YP_001640136.1 CDS Mext_2674 NC_010172.1 2987253 2988815 D catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 2987253..2988815 Methylobacterium extorquens PA1 5835178 YP_001640137.1 CDS Mext_2675 NC_010172.1 2989008 2990843 D KEGG: mes:Meso_2666 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 2989008..2990843 Methylobacterium extorquens PA1 5834967 YP_001640138.1 CDS Mext_2676 NC_010172.1 2991006 2992016 D PFAM: protein of unknown function DUF1611; KEGG: sme:SMc03251 hypothetical protein; hypothetical protein 2991006..2992016 Methylobacterium extorquens PA1 5834968 YP_001640139.1 CDS Mext_2677 NC_010172.1 2992030 2993010 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: nha:Nham_1314 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 2992030..2993010 Methylobacterium extorquens PA1 5834969 YP_001640140.1 CDS Mext_2678 NC_010172.1 2993020 2994138 R PFAM: Lytic transglycosylase catalytic; KEGG: mag:amb3136 hypothetical protein; lytic transglycosylase complement(2993020..2994138) Methylobacterium extorquens PA1 5834970 YP_001640141.1 CDS Mext_2679 NC_010172.1 2994376 2995647 D PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: mxa:MXAN_0452 putative myo-inositol-1-phosphate synthase; inositol-3-phosphate synthase 2994376..2995647 Methylobacterium extorquens PA1 5834034 YP_001640142.1 CDS Mext_2680 NC_010172.1 2995660 2996580 D KEGG: kra:Krad_3431 hypothetical protein; hypothetical protein 2995660..2996580 Methylobacterium extorquens PA1 5834035 YP_001640143.1 CDS Mext_2681 NC_010172.1 2996612 2997793 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bch:Bcen2424_3334 methyltransferase type 11; type 11 methyltransferase 2996612..2997793 Methylobacterium extorquens PA1 5834036 YP_001640144.1 CDS Mext_2682 NC_010172.1 2997793 2998821 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: kra:Krad_3430 oxidoreductase domain protein; oxidoreductase domain-containing protein 2997793..2998821 Methylobacterium extorquens PA1 5834037 YP_001640145.1 CDS Mext_2683 NC_010172.1 2998975 3000633 D PFAM: protein of unknown function DUF181; KEGG: kra:Krad_3428 protein of unknown function DUF181; hypothetical protein 2998975..3000633 Methylobacterium extorquens PA1 5834215 YP_001640146.1 CDS Mext_2684 NC_010172.1 3000630 3001523 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sco:SCO6575 hypothetical protein; xylose isomerase domain-containing protein 3000630..3001523 Methylobacterium extorquens PA1 5834216 YP_001640147.1 CDS Mext_2685 NC_010172.1 3001520 3002758 D PFAM: glycosyl transferase group 1; KEGG: kra:Krad_3427 glycosyl transferase group 1; group 1 glycosyl transferase 3001520..3002758 Methylobacterium extorquens PA1 5834217 YP_001640148.1 CDS Mext_2686 NC_010172.1 3002755 3003516 D PFAM: LmbE family protein; KEGG: kra:Krad_3426 LmbE family protein; LmbE family protein 3002755..3003516 Methylobacterium extorquens PA1 5834218 YP_001640149.1 CDS Mext_2687 NC_010172.1 3003500 3004126 D PFAM: Uracil-DNA glycosylase superfamily; KEGG: cph:Cpha266_1617 hypothetical protein; uracil-DNA glycosylase superfamily protein 3003500..3004126 Methylobacterium extorquens PA1 5832704 YP_001640150.1 CDS Mext_2688 NC_010172.1 3004338 3005369 D KEGG: xau:Xaut_0184 putative membrane protein of unknown function; hypothetical protein 3004338..3005369 Methylobacterium extorquens PA1 5832705 YP_001640151.1 CDS Mext_2689 NC_010172.1 3005393 3006685 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rpd:RPD_0887 ATP-binding region, ATPase-like; histidine kinase 3005393..3006685 Methylobacterium extorquens PA1 5832706 YP_001640152.1 CDS Mext_2690 NC_010172.1 3006886 3009384 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: spe:Spro_2413 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 3006886..3009384 Methylobacterium extorquens PA1 5832707 YP_001640153.1 CDS Mext_2691 NC_010172.1 3009381 3009845 D TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: mes:Meso_3892 transcriptional regulator, MerR family; Cu(I)-responsive transcriptional regulator 3009381..3009845 Methylobacterium extorquens PA1 5831479 YP_001640154.1 CDS Mext_2692 NC_010172.1 3009933 3011099 D KEGG: nha:Nham_2671 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3009933..3011099 Methylobacterium extorquens PA1 5831480 YP_001640155.1 CDS Mext_2693 NC_010172.1 3011048 3011554 R KEGG: rpb:RPB_4286 methyl-accepting chemotaxis sensory transducer; hypothetical protein complement(3011048..3011554) Methylobacterium extorquens PA1 5831481 YP_001640156.1 CDS Mext_2694 NC_010172.1 3011551 3012534 R PFAM: acyltransferase 3; KEGG: atc:AGR_C_4279 hypothetical protein; acyltransferase 3 complement(3011551..3012534) Methylobacterium extorquens PA1 5831482 YP_001640157.1 CDS Mext_2695 NC_010172.1 3013160 3014185 R TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: rpa:RPA0434 putative tRNA pseudouridine 55 synthase; tRNA pseudouridine synthase B complement(3013160..3014185) Methylobacterium extorquens PA1 5833594 YP_001640158.1 CDS Mext_2696 NC_010172.1 3014394 3014831 R PFAM: ribosome-binding factor A; KEGG: rpa:RPA0435 putative ribosome-binding factor A; ribosome-binding factor A complement(3014394..3014831) Methylobacterium extorquens PA1 5833595 YP_001640159.1 CDS Mext_2697 NC_010172.1 3014934 3017903 R TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; GTP-binding protein HSR1-related; elongation factor Tu domain 2 protein; translation initiation factor IF-2 domain protein; Initiation factor 2 associated domain protein ; Miro domain protein; KEGG: bbt:BBta_0057 translation initiation factor IF-2; translation initiation factor IF-2 complement(3014934..3017903) Methylobacterium extorquens PA1 5833596 YP_001640160.1 CDS Mext_2698 NC_010172.1 3017968 3018711 R PFAM: protein of unknown function DUF448; KEGG: xau:Xaut_0294 protein of unknown function DUF448; hypothetical protein complement(3017968..3018711) Methylobacterium extorquens PA1 5833597 YP_001640161.1 CDS Mext_2699 NC_010172.1 3018753 3020390 R KEGG: xau:Xaut_0295 NusA antitermination factor; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH type 1 domain protein; NusA domain protein; SMART: KH domain protein; transcription termination factor NusA complement(3018753..3020390) Methylobacterium extorquens PA1 5830946 YP_001640162.1 CDS Mext_2700 NC_010172.1 3020504 3021259 R PFAM: protein of unknown function DUF150; KEGG: xau:Xaut_0296 protein of unknown function DUF150; hypothetical protein complement(3020504..3021259) Methylobacterium extorquens PA1 5830947 YP_001640163.1 CDS Mext_2701 NC_010172.1 3021525 3022178 D KEGG: asa:ASA_3895 streptogramin A acetyltransferase; streptogramin A acetyltransferase 3021525..3022178 Methylobacterium extorquens PA1 5830948 YP_001640164.1 CDS Mext_2702 NC_010172.1 3022506 3023540 R TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: bmb:BruAb2_0345 Asd, aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase complement(3022506..3023540) Methylobacterium extorquens PA1 5830949 YP_001640165.1 CDS Mext_2703 NC_010172.1 3023757 3024743 D hypothetical protein 3023757..3024743 Methylobacterium extorquens PA1 5833590 YP_001640166.1 CDS Mext_2704 NC_010172.1 3024857 3025270 D hypothetical protein 3024857..3025270 Methylobacterium extorquens PA1 5833591 YP_001640167.1 CDS Mext_2705 NC_010172.1 3025334 3025882 R PFAM: GCN5-related N-acetyltransferase; KEGG: mfa:Mfla_1085 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3025334..3025882) Methylobacterium extorquens PA1 5833592 YP_001640168.1 CDS Mext_2706 NC_010172.1 3025966 3026259 R KEGG: xau:Xaut_4558 hypothetical protein; hypothetical protein complement(3025966..3026259) Methylobacterium extorquens PA1 5833593 YP_001640169.1 CDS Mext_2707 NC_010172.1 3026275 3027492 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: sit:TM1040_0080 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K complement(3026275..3027492) Methylobacterium extorquens PA1 5833104 YP_001640170.1 CDS Mext_2708 NC_010172.1 3027658 3028344 D PFAM: regulatory protein TetR; KEGG: rpb:RPB_1805 transcriptional regulator, TetR family; regulatory protein TetR 3027658..3028344 Methylobacterium extorquens PA1 5833105 YP_001640171.1 CDS Mext_2709 NC_010172.1 3028511 3028990 D KEGG: smd:Smed_3234 hypothetical protein; hypothetical protein 3028511..3028990 Methylobacterium extorquens PA1 5833106 YP_001640172.1 CDS Mext_2710 NC_010172.1 3029244 3031049 D KEGG: nmu:Nmul_A1403 alpha amylase, catalytic region; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose trehalohydrolase 3029244..3031049 Methylobacterium extorquens PA1 5833107 YP_001640173.1 CDS Mext_2711 NC_010172.1 3031046 3035986 D amylomaltase; acts to release glucose from maltodextrins; putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase 3031046..3035986 Methylobacterium extorquens PA1 5831162 YP_001640174.1 CDS Mext_2712 NC_010172.1 3036125 3039499 D PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bxe:Bxe_B2861 putative alpha-amylase-related protein; alpha amylase 3036125..3039499 Methylobacterium extorquens PA1 5831163 YP_001640175.1 CDS Mext_2713 NC_010172.1 3039671 3042937 D KEGG: mes:Meso_2678 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; trehalose synthase 3039671..3042937 Methylobacterium extorquens PA1 5831164 YP_001640176.1 CDS Mext_2714 NC_010172.1 3043000 3045354 D KEGG: rxy:Rxyl_0316 1,4-alpha-glucan branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; 1,4-alpha-glucan branching protein 3043000..3045354 Methylobacterium extorquens PA1 5831165 YP_001640177.1 CDS Mext_2715 NC_010172.1 3045376 3045705 R PFAM: protein of unknown function UPF0060; KEGG: sal:Sala_0701 protein of unknown function UPF0060; hypothetical protein complement(3045376..3045705) Methylobacterium extorquens PA1 5833411 YP_001640178.1 CDS Mext_2716 NC_010172.1 3045734 3046180 D hypothetical protein 3045734..3046180 Methylobacterium extorquens PA1 5833412 YP_001640179.1 CDS Mext_2717 NC_010172.1 3046177 3047292 D KEGG: kra:Krad_4460 radical SAM domain protein; radical SAM domain-containing protein 3046177..3047292 Methylobacterium extorquens PA1 5833413 YP_001640180.1 CDS Mext_2718 NC_010172.1 3047324 3048088 R SMART: HhH-GPD family protein; KEGG: ccr:CC_2272 endonuclease III family protein; HhH-GPD family protein complement(3047324..3048088) Methylobacterium extorquens PA1 5833414 YP_001640181.1 CDS Mext_2719 NC_010172.1 3048138 3048911 R PFAM: transcription activator effector binding; KEGG: rpc:RPC_0216 transcription activator, effector binding; transcription activator effector binding complement(3048138..3048911) Methylobacterium extorquens PA1 5831036 YP_001640182.1 CDS Mext_2720 NC_010172.1 3049108 3049998 D PFAM: diaminopimelate epimerase; KEGG: rpc:RPC_0215 diaminopimelate epimerase; diaminopimelate epimerase 3049108..3049998 Methylobacterium extorquens PA1 5831037 YP_001640183.1 CDS Mext_2721 NC_010172.1 3049995 3051227 D KEGG: mes:Meso_3390 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein 3049995..3051227 Methylobacterium extorquens PA1 5831038 YP_001640184.1 CDS Mext_2722 NC_010172.1 3051268 3051987 R PFAM: pseudouridine synthase; KEGG: nwi:Nwi_0315 pseudouridine synthase; pseudouridine synthase complement(3051268..3051987) Methylobacterium extorquens PA1 5831039 YP_001640185.1 CDS Mext_2723 NC_010172.1 3052061 3053527 D KEGG: xau:Xaut_0413 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 3052061..3053527 Methylobacterium extorquens PA1 5833579 YP_001640186.1 CDS Mext_2724 NC_010172.1 3053670 3054290 D TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; KEGG: bov:BOV_1862 intracellular septation protein A; intracellular septation protein A 3053670..3054290 Methylobacterium extorquens PA1 5833580 YP_001640187.1 CDS Mext_2725 NC_010172.1 3054404 3055306 R PFAM: hydroxyneurosporene synthase; KEGG: rpc:RPC_1288 hydroxyneurosporene synthase; hydroxyneurosporene synthase complement(3054404..3055306) Methylobacterium extorquens PA1 5833581 YP_001640188.1 CDS Mext_2726 NC_010172.1 3055300 3056799 R TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rru:Rru_A2984 CrtD protein; phytoene desaturase complement(3055300..3056799) Methylobacterium extorquens PA1 5833582 YP_001640189.1 CDS Mext_2727 NC_010172.1 3056905 3057771 D PFAM: Polyprenyl synthetase; KEGG: rru:Rru_A2983 polyprenyl synthetase; polyprenyl synthetase 3056905..3057771 Methylobacterium extorquens PA1 5832726 YP_001640190.1 CDS Mext_2728 NC_010172.1 3057793 3058938 D PFAM: O-methyltransferase family 2; KEGG: rpc:RPC_1291 O-methyltransferase, family 2; O-methyltransferase family protein 3057793..3058938 Methylobacterium extorquens PA1 5832727 YP_001640191.1 CDS Mext_2729 NC_010172.1 3059040 3059978 D TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: rru:Rru_A2981 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide; chlorophyll synthesis pathway protein BchC 3059040..3059978 Methylobacterium extorquens PA1 5832728 YP_001640192.1 CDS Mext_2730 NC_010172.1 3059975 3060979 D KEGG: rpb:RPB_4001 chlorophyllide reductase iron protein subunit X; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein; chlorophyllide reductase iron protein subunit X 3059975..3060979 Methylobacterium extorquens PA1 5832729 YP_001640193.1 CDS Mext_2731 NC_010172.1 3060983 3062509 D TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase component 1; KEGG: bra:BRADO1619 bacteriochlorophyllide reductase subunit 52.5 kDa chain; chlorophyllide reductase subunit Y 3060983..3062509 Methylobacterium extorquens PA1 5832056 YP_001640194.1 CDS Mext_2732 NC_010172.1 3062509 3063975 D TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1; protein of unknown function DUF1197; KEGG: rpa:RPA1524 bacteriochlorophyllide reductase subunit; chlorophyllide reductase subunit Z 3062509..3063975 Methylobacterium extorquens PA1 5832057 YP_001640195.1 CDS Mext_2733 NC_010172.1 3063972 3064280 D hypothetical protein 3063972..3064280 Methylobacterium extorquens PA1 5832058 YP_001640196.1 CDS Mext_2734 NC_010172.1 3064451 3064681 D PFAM: antenna complex alpha/beta subunit; KEGG: bbt:BBta_6433 light harvesting 1 beta subunit; antenna complex alpha/beta subunit 3064451..3064681 Methylobacterium extorquens PA1 5832059 YP_001640197.1 CDS Mext_2735 NC_010172.1 3064693 3064881 D PFAM: antenna complex alpha/beta subunit; KEGG: rpa:RPA1526 light-harvesting complex 1 alpha chain; antenna complex alpha/beta subunit 3064693..3064881 Methylobacterium extorquens PA1 5833326 YP_001640198.1 CDS Mext_2736 NC_010172.1 3064956 3065780 D TIGRFAM: photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; KEGG: hha:Hhal_1605 photosynthetic reaction center L subunit; photosynthetic reaction center subunit L 3064956..3065780 Methylobacterium extorquens PA1 5833327 YP_001640199.1 CDS Mext_2737 NC_010172.1 3065903 3066880 D TIGRFAM: photosynthetic reaction center, M subunit; PFAM: photosynthetic reaction centre protein; KEGG: bra:BRADO1625 photosynthetic reaction center M protein; photosynthetic reaction center subunit M 3065903..3066880 Methylobacterium extorquens PA1 5833328 YP_001640200.1 CDS Mext_2738 NC_010172.1 3066877 3067986 D PFAM: photosynthetic reaction centre cytochrome c subunit; KEGG: hha:Hhal_1603 photosynthetic reaction centre, cytochrome c subunit; photosynthetic reaction center cytochrome c subunit 3066877..3067986 Methylobacterium extorquens PA1 5833329 YP_001640201.1 CDS Mext_2739 NC_010172.1 3068384 3070132 D KEGG: sme:SMb21466 ABC transporter ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 3068384..3070132 Methylobacterium extorquens PA1 5831537 YP_001640202.1 CDS Mext_2740 NC_010172.1 3070132 3071478 D TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: bja:bll7913 HlyD family secretion protein; HlyD family type I secretion membrane fusion protein 3070132..3071478 Methylobacterium extorquens PA1 5831538 YP_001640203.1 CDS rpmJ NC_010172.1 3071631 3071756 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 3071631..3071756 Methylobacterium extorquens PA1 5831539 YP_001640204.1 CDS Mext_2742 NC_010172.1 3071834 3072442 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:bll7547 hypothetical protein; hypothetical protein 3071834..3072442 Methylobacterium extorquens PA1 5831540 YP_001640205.1 CDS Mext_2743 NC_010172.1 3072453 3073448 D PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_1660 putative alpha/beta hydrolase; alpha/beta hydrolase fold protein 3072453..3073448 Methylobacterium extorquens PA1 5832118 YP_001640206.1 CDS Mext_2744 NC_010172.1 3073500 3074951 R KEGG: nwi:Nwi_0986 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase complement(3073500..3074951) Methylobacterium extorquens PA1 5832119 YP_001640207.1 CDS Mext_2745 NC_010172.1 3075304 3076161 D KEGG: xau:Xaut_2468 porin; porin 3075304..3076161 Methylobacterium extorquens PA1 5832120 YP_001640208.1 CDS Mext_2746 NC_010172.1 3076477 3077019 R PFAM: protein of unknown function DUF1036; KEGG: bja:blr7137 hypothetical protein; hypothetical protein complement(3076477..3077019) Methylobacterium extorquens PA1 5832121 YP_001640209.1 CDS Mext_2747 NC_010172.1 3076985 3078298 R PFAM: MOFRL domain protein; KEGG: bja:blr7830 hydroxypyruvate reductase; hydroxypyruvate reductase complement(3076985..3078298) Methylobacterium extorquens PA1 5835713 YP_001640210.1 CDS Mext_2748 NC_010172.1 3078526 3079299 D PFAM: N-formylglutamate amidohydrolase; KEGG: pla:Plav_2032 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 3078526..3079299 Methylobacterium extorquens PA1 5835714 YP_001640211.1 CDS Mext_2749 NC_010172.1 3079328 3079678 D PFAM: protein of unknown function DUF1244; KEGG: bja:bll7136 hypothetical protein; hypothetical protein 3079328..3079678 Methylobacterium extorquens PA1 5835715 YP_001640212.1 CDS Mext_2750 NC_010172.1 3079783 3080049 D KEGG: bra:BRADO1188 hypothetical protein; hypothetical protein 3079783..3080049 Methylobacterium extorquens PA1 5835716 YP_001640213.1 CDS Mext_2751 NC_010172.1 3080271 3081761 R PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: xau:Xaut_2067 protein of unknown function DUF882; hypothetical protein complement(3080271..3081761) Methylobacterium extorquens PA1 5831722 YP_001640214.1 CDS Mext_2752 NC_010172.1 3081987 3083927 R PFAM: Peptidoglycan-binding domain 1 protein; KEGG: xau:Xaut_2068 peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein complement(3081987..3083927) Methylobacterium extorquens PA1 5831723 YP_001640215.1 CDS Mext_2753 NC_010172.1 3084174 3085664 R PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mes:Meso_2731 two component, sigma54 specific, transcriptional regulator, fis family; sigma-54 factor interaction domain-containing protein complement(3084174..3085664) Methylobacterium extorquens PA1 5831724 YP_001640216.1 CDS Mext_2754 NC_010172.1 3085993 3087870 D TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: xau:Xaut_2070 oligoendopeptidase, PepF/M3 family; pepF/M3 family oligoendopeptidase 3085993..3087870 Methylobacterium extorquens PA1 5831725 YP_001640217.1 CDS Mext_2755 NC_010172.1 3087949 3088374 D hypothetical protein 3087949..3088374 Methylobacterium extorquens PA1 5831563 YP_001640218.1 CDS Mext_2756 NC_010172.1 3088371 3088784 D TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: rpd:RPD_1413 death-on-curing protein; death-on-curing family protein 3088371..3088784 Methylobacterium extorquens PA1 5831564 YP_001640219.1 CDS Mext_2757 NC_010172.1 3088877 3090247 D PFAM: ABC-1 domain protein; KEGG: xau:Xaut_1153 ABC-1 domain protein; hypothetical protein 3088877..3090247 Methylobacterium extorquens PA1 5831565 YP_001640220.1 CDS Mext_2758 NC_010172.1 3090360 3090653 D hypothetical protein 3090360..3090653 Methylobacterium extorquens PA1 5831566 YP_001640221.1 CDS Mext_2759 NC_010172.1 3090765 3091904 D PFAM: alanine dehydrogenase/PNT domain protein; KEGG: bja:bll7126 NAD(P)+ transhydrogenase; NAD(P)(+) transhydrogenase 3090765..3091904 Methylobacterium extorquens PA1 5832749 YP_001640222.1 CDS Mext_2760 NC_010172.1 3091926 3092378 D KEGG: oan:Oant_1385 PntAB, NAD(P) transhydrogenase, alpha2 subunit; NAD(P) transhydrogenase subunit PntAB 3091926..3092378 Methylobacterium extorquens PA1 5832750 YP_001640223.1 CDS Mext_2761 NC_010172.1 3092383 3093783 D PFAM: NAD(P) transhydrogenase beta subunit; KEGG: xau:Xaut_1950 NAD(P)(+) transhydrogenase (AB-specific); NAD(P)(+) transhydrogenase 3092383..3093783 Methylobacterium extorquens PA1 5832751 YP_001640224.1 CDS Mext_2762 NC_010172.1 3093878 3095713 D TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: xau:Xaut_4751 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 3093878..3095713 Methylobacterium extorquens PA1 5832752 YP_001640225.1 CDS Mext_2763 NC_010172.1 3096171 3096905 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bra:BRADO3435 putative transcriptional regulatory protein, Crp/Fnr family; cyclic nucleotide-binding protein 3096171..3096905 Methylobacterium extorquens PA1 5832741 YP_001640226.1 CDS Mext_2764 NC_010172.1 3096957 3097661 D PFAM: HWE histidine kinase; KEGG: rpa:RPA2076 putative signal transduction histidine kinase; HWE histidine kinase 3096957..3097661 Methylobacterium extorquens PA1 5832742 YP_001640227.1 CDS Mext_2765 NC_010172.1 3097871 3099856 D PFAM: surface antigen (D15); KEGG: nwi:Nwi_0875 surface antigen (D15); surface antigen (D15) 3097871..3099856 Methylobacterium extorquens PA1 5833261 YP_001640228.1 CDS Mext_2766 NC_010172.1 3099857 3104248 D PFAM: protein of unknown function DUF490; KEGG: nha:Nham_1002 protein of unknown function DUF490; hypothetical protein 3099857..3104248 Methylobacterium extorquens PA1 5833262 YP_001640229.1 CDS Mext_2767 NC_010172.1 3104839 3104979 D hypothetical protein 3104839..3104979 Methylobacterium extorquens PA1 5833263 YP_001640230.1 CDS Mext_2768 NC_010172.1 3105190 3105441 D hypothetical protein 3105190..3105441 Methylobacterium extorquens PA1 5833264 YP_001640231.1 CDS Mext_2769 NC_010172.1 3105543 3106031 R catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase complement(3105543..3106031) Methylobacterium extorquens PA1 5831357 YP_001640232.1 CDS Mext_2770 NC_010172.1 3106320 3108209 D KEGG: bja:blr5735 transcriptional regulatory protein; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; AAA ATPase; PAS sensor protein 3106320..3108209 Methylobacterium extorquens PA1 5831358 YP_001640233.1 CDS Mext_2771 NC_010172.1 3108294 3109898 D PFAM: Carbohydrate-selective porin OprB; KEGG: rpb:RPB_1735 carbohydrate-selective porin OprB; carbohydrate-selective porin OprB 3108294..3109898 Methylobacterium extorquens PA1 5831359 YP_001640234.1 CDS Mext_2772 NC_010172.1 3109923 3110981 R PFAM: Di-haem cytochrome c peroxidase; KEGG: bja:blr1552 methylamine utilization protein precursor; cytochrome-c peroxidase complement(3109923..3110981) Methylobacterium extorquens PA1 5831360 YP_001640235.1 CDS Mext_2773 NC_010172.1 3111151 3111522 R KEGG: bja:bll1555 hypothetical protein; hypothetical protein complement(3111151..3111522) Methylobacterium extorquens PA1 5831471 YP_001640236.1 CDS Mext_2774 NC_010172.1 3111706 3114570 D KEGG: bja:bll5864 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; diguanylate cyclase 3111706..3114570 Methylobacterium extorquens PA1 5831472 YP_001640237.1 CDS Mext_2775 NC_010172.1 3114805 3115662 D PFAM: manganese containing catalase; KEGG: rsq:Rsph17025_0606 catalase; catalase 3114805..3115662 Methylobacterium extorquens PA1 5831473 YP_001640238.1 CDS Mext_2776 NC_010172.1 3115741 3116250 D PFAM: protein of unknown function DUF892; KEGG: ret:RHE_PF00058 hypothetical protein; hypothetical protein 3115741..3116250 Methylobacterium extorquens PA1 5831474 YP_001640239.1 CDS Mext_2777 NC_010172.1 3116441 3117112 R KEGG: mlo:mlr3555 hypothetical protein; hypothetical protein complement(3116441..3117112) Methylobacterium extorquens PA1 5830972 YP_001640240.1 CDS Mext_2778 NC_010172.1 3117201 3117452 D KEGG: bbt:BBta_6772 hypothetical protein; hypothetical protein 3117201..3117452 Methylobacterium extorquens PA1 5830973 YP_001640241.1 CDS Mext_2779 NC_010172.1 3117742 3119691 D PFAM: CBS domain containing protein; Chloride channel core; KEGG: bms:BR0490 voltage gated chloride channel family protein; chloride channel core 3117742..3119691 Methylobacterium extorquens PA1 5830975 YP_001640242.1 CDS Mext_2780 NC_010172.1 3119708 3120208 D hypothetical protein 3119708..3120208 Methylobacterium extorquens PA1 5833432 YP_001640243.1 CDS Mext_2781 NC_010172.1 3120219 3121067 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 3120219..3121067 Methylobacterium extorquens PA1 5833433 YP_001640244.1 CDS Mext_2782 NC_010172.1 3121244 3121555 D KEGG: rle:RL1194 putative transmembrane protein; putative transmembrane protein 3121244..3121555 Methylobacterium extorquens PA1 5833434 YP_001640245.1 CDS Mext_2783 NC_010172.1 3121887 3122348 R NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(3121887..3122348) Methylobacterium extorquens PA1 5831094 YP_001640246.1 CDS eno NC_010172.1 3122640 3123929 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 3122640..3123929 Methylobacterium extorquens PA1 5831095 YP_001640247.1 CDS Mext_2785 NC_010172.1 3124063 3124374 D PFAM: Septum formation initiator; KEGG: rpc:RPC_2488 septum formation initiator; septum formation initiator 3124063..3124374 Methylobacterium extorquens PA1 5831096 YP_001640248.1 CDS Mext_2786 NC_010172.1 3124550 3125599 D KEGG: xau:Xaut_3888 pyruvate dehydrogenase (acetyl-transferring); TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component; pyruvate dehydrogenase E1 component subunit alpha 3124550..3125599 Methylobacterium extorquens PA1 5831097 YP_001640249.1 CDS Mext_2787 NC_010172.1 3125745 3127154 D catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 3125745..3127154 Methylobacterium extorquens PA1 5832129 YP_001640250.1 CDS Mext_2788 NC_010172.1 3127165 3127443 D KEGG: rpe:RPE_2615 hypothetical protein; hypothetical protein 3127165..3127443 Methylobacterium extorquens PA1 5832130 YP_001640251.1 CDS Mext_2789 NC_010172.1 3127477 3128889 D KEGG: xau:Xaut_3891 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 3127477..3128889 Methylobacterium extorquens PA1 5832131 YP_001640252.1 CDS Mext_2790 NC_010172.1 3129052 3130491 D E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 3129052..3130491 Methylobacterium extorquens PA1 5832132 YP_001640253.1 CDS Mext_2791 NC_010172.1 3130702 3130905 D hypothetical protein 3130702..3130905 Methylobacterium extorquens PA1 5832976 YP_001640254.1 CDS Mext_2792 NC_010172.1 3131002 3131514 R KEGG: mlo:mll1484 hypothetical protein; hypothetical protein complement(3131002..3131514) Methylobacterium extorquens PA1 5832977 YP_001640255.1 CDS Mext_2793 NC_010172.1 3131800 3132303 D KEGG: xft:PD1851 endo-1,4-beta-glucanase; endo-1,4-beta-glucanase 3131800..3132303 Methylobacterium extorquens PA1 5832978 YP_001640256.1 CDS Mext_2794 NC_010172.1 3132421 3132681 D hypothetical protein 3132421..3132681 Methylobacterium extorquens PA1 5832979 YP_001640257.1 CDS Mext_2795 NC_010172.1 3132760 3133404 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_3286 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 3132760..3133404 Methylobacterium extorquens PA1 5831966 YP_001640258.1 CDS Mext_2796 NC_010172.1 3133573 3134919 R KEGG: reu:Reut_B3494 L-sorbosone dehydrogenase; L-sorbosone dehydrogenase complement(3133573..3134919) Methylobacterium extorquens PA1 5831967 YP_001640259.1 CDS Mext_2797 NC_010172.1 3134941 3135156 R hypothetical protein complement(3134941..3135156) Methylobacterium extorquens PA1 5831968 YP_001640260.1 CDS Mext_2798 NC_010172.1 3135367 3136104 D PFAM: cell wall hydrolase SleB; KEGG: ret:RHE_PE00255 putative cell wall-associated hydrolase protein; cell wall hydrolase SleB 3135367..3136104 Methylobacterium extorquens PA1 5831969 YP_001640261.1 CDS Mext_2799 NC_010172.1 3136238 3137257 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 3136238..3137257 Methylobacterium extorquens PA1 5833872 YP_001640262.1 CDS Mext_2800 NC_010172.1 3137264 3137722 D PFAM: cyclase/dehydrase; KEGG: nwi:Nwi_1440 streptomyces cyclase/dehydrase; cyclase/dehydrase 3137264..3137722 Methylobacterium extorquens PA1 5833873 YP_001640263.1 CDS Mext_2801 NC_010172.1 3137807 3138232 R PFAM: regulatory protein AsnC/Lrp family; Helix-turn-helix type 11 domain protein; KEGG: rle:RL3094 putative AsnC family transcriptional regulator; AsnC/Lrp family regulatory protein complement(3137807..3138232) Methylobacterium extorquens PA1 5833874 YP_001640264.1 CDS Mext_2802 NC_010172.1 3138363 3139394 D catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase 3138363..3139394 Methylobacterium extorquens PA1 5833875 YP_001640265.1 CDS Mext_2803 NC_010172.1 3139708 3140748 D PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: bxe:Bxe_A0098 3-oxoacyl-(acyl-carrier protein) synthase; beta-ketoacyl-acyl-carrier-protein synthase I 3139708..3140748 Methylobacterium extorquens PA1 5832841 YP_001640266.1 CDS Mext_2804 NC_010172.1 3140768 3141001 D KEGG: bmn:BMA10247_3096 hypothetical protein; hypothetical protein 3140768..3141001 Methylobacterium extorquens PA1 5832842 YP_001640267.1 CDS Mext_2805 NC_010172.1 3141002 3142048 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: bxe:Bxe_A0096 3-oxoacyl-(acyl-carrier protein) synthase; beta-ketoacyl-acyl-carrier-protein synthase I 3141002..3142048 Methylobacterium extorquens PA1 5832843 YP_001640268.1 CDS Mext_2806 NC_010172.1 3142045 3142806 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bpd:BURPS668_3878 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 3142045..3142806 Methylobacterium extorquens PA1 5832844 YP_001640269.1 CDS Mext_2807 NC_010172.1 3142735 3143883 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: slo:Shew_1330 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein complement(3142735..3143883) Methylobacterium extorquens PA1 5831628 YP_001640270.1 CDS Mext_2808 NC_010172.1 3144290 3144940 D KEGG: bmn:BMA10247_3093 hexapeptide transferase family protein; hexapeptide transferase family protein 3144290..3144940 Methylobacterium extorquens PA1 5831629 YP_001640271.1 CDS Mext_2809 NC_010172.1 3145131 3147284 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ccr:CC_0119 TPR domain protein; hypothetical protein complement(3145131..3147284) Methylobacterium extorquens PA1 5831630 YP_001640272.1 CDS Mext_2810 NC_010172.1 3147471 3147809 R KEGG: rso:RSc0006 hypothetical protein; hypothetical protein complement(3147471..3147809) Methylobacterium extorquens PA1 5831631 YP_001640273.1 CDS Mext_2811 NC_010172.1 3147806 3149593 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: swi:Swit_4845 ABC transporter related; ABC transporter-like protein complement(3147806..3149593) Methylobacterium extorquens PA1 5831456 YP_001640274.1 CDS Mext_2813 NC_010172.1 3150617 3151114 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bbt:BBta_0872 putative oxidoreductase with iron-sulfur subunit; 2Fe-2S iron-sulfur cluster binding domain-containing protein 3150617..3151114 Methylobacterium extorquens PA1 5831458 YP_001640275.1 CDS Mext_2814 NC_010172.1 3151111 3152160 D PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bja:blr2218 putative xanthine dehydrogenase; FAD-binding molybdopterin dehydrogenase 3151111..3152160 Methylobacterium extorquens PA1 5831459 YP_001640276.1 CDS Mext_2815 NC_010172.1 3152153 3154396 D PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bja:blr2219 dehydrogenase; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 3152153..3154396 Methylobacterium extorquens PA1 5831918 YP_001640277.1 CDS Mext_2816 NC_010172.1 3154545 3155072 R PFAM: CinA domain protein; KEGG: xau:Xaut_4307 CinA domain protein; CinA domain-containing protein complement(3154545..3155072) Methylobacterium extorquens PA1 5831919 YP_001640278.1 CDS Mext_2817 NC_010172.1 3155069 3156403 R TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MECDP-synthase; KEGG: nwi:Nwi_1442 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(3155069..3156403) Methylobacterium extorquens PA1 5831920 YP_001640279.1 CDS Mext_2818 NC_010172.1 3156531 3157559 D TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: rsh:Rsph17029_1458 putative TIM-barrel protein, nifR3 family; NifR3 family TIM-barrel protein 3156531..3157559 Methylobacterium extorquens PA1 5831921 YP_001640280.1 CDS Mext_2819 NC_010172.1 3157559 3158692 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: rpd:RPD_2589 ATP-binding region, ATPase-like; PAS sensor protein 3157559..3158692 Methylobacterium extorquens PA1 5834425 YP_001640281.1 CDS Mext_2820 NC_010172.1 3158703 3160175 D KEGG: xau:Xaut_4399 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; nitrogen regulation protein NR(I) 3158703..3160175 Methylobacterium extorquens PA1 5834426 YP_001640282.1 CDS Mext_2821 NC_010172.1 3160303 3161940 D PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mag:amb0356 DNA or RNA helicase of superfamily II; helicase domain-containing protein 3160303..3161940 Methylobacterium extorquens PA1 5834427 YP_001640283.1 CDS Mext_2822 NC_010172.1 3162004 3164403 D KEGG: xau:Xaut_4398 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS sensor protein 3162004..3164403 Methylobacterium extorquens PA1 5834428 YP_001640284.1 CDS Mext_2823 NC_010172.1 3164400 3165770 D PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: rpa:RPA2595 nitrogen assimilation regulatory protein NtrX-response regulator; sigma-54 factor interaction domain-containing protein 3164400..3165770 Methylobacterium extorquens PA1 5834777 YP_001640285.1 CDS Mext_2824 NC_010172.1 3166078 3166332 D TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: xau:Xaut_4393 RNA chaperone Hfq; RNA chaperone Hfq 3166078..3166332 Methylobacterium extorquens PA1 5834778 YP_001640286.1 CDS Mext_2825 NC_010172.1 3166430 3167845 D TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: xau:Xaut_4392 small GTP-binding protein; GTP-binding proten HflX 3166430..3167845 Methylobacterium extorquens PA1 5834779 YP_001640287.1 CDS Mext_2826 NC_010172.1 3167992 3169560 R PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: swi:Swit_2232 sulphate transporter; sulfate transporter complement(3167992..3169560) Methylobacterium extorquens PA1 5834780 YP_001640288.1 CDS Mext_2827 NC_010172.1 3169570 3170325 R PFAM: carbonic anhydrase; KEGG: ret:RHE_CH01064 probable carbonic anhydrase protein; carbonate dehydratase complement(3169570..3170325) Methylobacterium extorquens PA1 5832403 YP_001640289.1 CDS Mext_2828 NC_010172.1 3170622 3170942 R hypothetical protein complement(3170622..3170942) Methylobacterium extorquens PA1 5832404 YP_001640290.1 CDS Mext_2829 NC_010172.1 3171775 3172161 R PFAM: protein of unknown function DUF305; KEGG: sme:SMc00921 hypothetical signal peptide protein; hypothetical protein complement(3171775..3172161) Methylobacterium extorquens PA1 5832405 YP_001640291.1 CDS Mext_2830 NC_010172.1 3172191 3172568 R KEGG: xau:Xaut_3407 hypothetical protein; hypothetical protein complement(3172191..3172568) Methylobacterium extorquens PA1 5832406 YP_001640292.1 CDS Mext_2831 NC_010172.1 3172595 3175771 R PFAM: acriflavin resistance protein; KEGG: xau:Xaut_3406 heavy metal efflux pump, CzcA family; acriflavin resistance protein complement(3172595..3175771) Methylobacterium extorquens PA1 5830914 YP_001640293.1 CDS Mext_2832 NC_010172.1 3175885 3177612 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: xau:Xaut_3405 hypothetical protein; RND family efflux transporter MFP subunit complement(3175885..3177612) Methylobacterium extorquens PA1 5830915 YP_001640294.1 CDS Mext_2833 NC_010172.1 3177684 3178088 R KEGG: fal:FRAAL5625 hypothetical protein; putative esterase/lipase/thioesterase domains; hypothetical protein complement(3177684..3178088) Methylobacterium extorquens PA1 5830916 YP_001640295.1 CDS Mext_2834 NC_010172.1 3178708 3179196 D PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator; ROSMUCR transcriptional regulator 3178708..3179196 Methylobacterium extorquens PA1 5830917 YP_001640296.1 CDS Mext_2835 NC_010172.1 3179248 3179835 D PFAM: CheW domain protein; KEGG: mag:amb1962 chemotaxis signal transduction protein; CheW domain-containing protein 3179248..3179835 Methylobacterium extorquens PA1 5830918 YP_001640297.1 CDS Mext_2836 NC_010172.1 3179847 3181304 D PFAM: MCP methyltransferase CheR-type; Tetratricopeptide TPR_2 repeat protein; KEGG: mag:amb1963 chemotaxis protein methyltransferase CheR; protein-glutamate O-methyltransferase 3179847..3181304 Methylobacterium extorquens PA1 5834800 YP_001640298.1 CDS Mext_2837 NC_010172.1 3181301 3181858 D PFAM: CheW domain protein; KEGG: rca:Rcas_4203 CheW protein; CheW domain-containing protein 3181301..3181858 Methylobacterium extorquens PA1 5834801 YP_001640299.1 CDS Mext_2838 NC_010172.1 3181939 3183687 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mag:amb1965 methyl-accepting chemotaxis protein; chemotaxis sensory transducer protein 3181939..3183687 Methylobacterium extorquens PA1 5834802 YP_001640300.1 CDS Mext_2839 NC_010172.1 3183712 3185958 D PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: mxa:MXAN_6951 sensor histidine kinase/response regulator; response regulator receiver 3183712..3185958 Methylobacterium extorquens PA1 5834803 YP_001640301.1 CDS Mext_2840 NC_010172.1 3185955 3187040 D PFAM: CheB methylesterase; response regulator receiver; KEGG: mag:amb1966 chemotaxis response regulator; protein-glutamate methylesterase 3185955..3187040 Methylobacterium extorquens PA1 5834804 YP_001640302.1 CDS Mext_2841 NC_010172.1 3187037 3188770 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mag:amb1967 signal transduction histidine kinase; ATPase domain-containing protein 3187037..3188770 Methylobacterium extorquens PA1 5834698 YP_001640303.1 CDS Mext_2842 NC_010172.1 3188767 3190635 D KEGG: gox:GOX0269 sensory transduction protein kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAS sensor protein 3188767..3190635 Methylobacterium extorquens PA1 5834699 YP_001640304.1 CDS Mext_2843 NC_010172.1 3190733 3190963 D PFAM: metallothionein family 14; KEGG: ava:Ava_C0149 metallothionein, family 14; metallothionein family protein 3190733..3190963 Methylobacterium extorquens PA1 5834700 YP_001640305.1 CDS Mext_2844 NC_010172.1 3190991 3192313 R PFAM: WD-40 repeat protein; cytochrome c class I; KEGG: mes:Meso_2440 WD-40 repeat; WD-40 repeat-containing protein complement(3190991..3192313) Methylobacterium extorquens PA1 5834701 YP_001640306.1 CDS Mext_2845 NC_010172.1 3192532 3193617 D PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; KEGG: nha:Nham_3135 molybdopterin binding domain; molybdopterin binding domain-containing protein 3192532..3193617 Methylobacterium extorquens PA1 5834702 YP_001640307.1 CDS Mext_2846 NC_010172.1 3193614 3195590 D TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: bja:blr2308 putative molybdopterin biosynthesis protein; putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein 3193614..3195590 Methylobacterium extorquens PA1 5832655 YP_001640308.1 CDS Mext_2847 NC_010172.1 3195587 3196123 D TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: bbr:BB2113 molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein B 3195587..3196123 Methylobacterium extorquens PA1 5832656 YP_001640309.1 CDS Mext_2848 NC_010172.1 3196127 3197377 D TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: nha:Nham_3130 MoeA-like, domain I and II; molybdenum cofactor synthesis domain-containing protein 3196127..3197377 Methylobacterium extorquens PA1 5832657 YP_001640310.1 CDS Mext_2849 NC_010172.1 3197435 3198472 R PFAM: regulatory protein LysR; KEGG: pnu:Pnuc_1335 transcriptional regulator of molybdate metabolism, LysR family; regulatory protein LysR complement(3197435..3198472) Methylobacterium extorquens PA1 5832658 YP_001640311.1 CDS Mext_2850 NC_010172.1 3198553 3199293 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mag:amb3046 ABC-type tungstate transport system, periplasmic component; binding-protein-dependent transport system inner membrane protein 3198553..3199293 Methylobacterium extorquens PA1 5832659 YP_001640312.1 CDS Mext_2851 NC_010172.1 3199290 3200006 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo2923 probable tungstate ATP-binding protein; ABC transporter-like protein 3199290..3200006 Methylobacterium extorquens PA1 5834974 YP_001640313.1 CDS Mext_2852 NC_010172.1 3199979 3200806 D PFAM: extracellular solute-binding protein family 1; KEGG: bja:bll6227 putative sulfate transport system substrate-binding protein; extracellular solute-binding protein 3199979..3200806 Methylobacterium extorquens PA1 5834975 YP_001640314.1 CDS Mext_2853 NC_010172.1 3200975 3201211 R hypothetical protein complement(3200975..3201211) Methylobacterium extorquens PA1 5834976 YP_001640315.1 CDS Mext_2854 NC_010172.1 3201255 3201899 R PFAM: PRC-barrel domain protein; KEGG: rpa:RPA3568 hypothetical protein; PRC-barrel domain-containing protein complement(3201255..3201899) Methylobacterium extorquens PA1 5834977 YP_001640316.1 CDS mdoG NC_010172.1 3201968 3203644 R involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G complement(3201968..3203644) Methylobacterium extorquens PA1 5834978 YP_001640317.1 CDS Mext_2856 NC_010172.1 3203679 3205610 D necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 3203679..3205610 Methylobacterium extorquens PA1 5834751 YP_001640318.1 CDS Mext_2857 NC_010172.1 3205700 3206167 R KEGG: bja:bsr2670 hypothetical protein; hypothetical protein complement(3205700..3206167) Methylobacterium extorquens PA1 5834752 YP_001640319.1 CDS Mext_2858 NC_010172.1 3206257 3207474 R PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rsq:Rsph17025_0780 cystathionine gamma-synthase; cystathionine gamma-synthase complement(3206257..3207474) Methylobacterium extorquens PA1 5834753 YP_001640320.1 CDS Mext_2859 NC_010172.1 3207572 3208087 D PFAM: TspO/MBR family protein; KEGG: xau:Xaut_2163 TspO and MBR like protein; TspO/MBR family protein 3207572..3208087 Methylobacterium extorquens PA1 5834754 YP_001640321.1 CDS Mext_2860 NC_010172.1 3208248 3208613 R PFAM: response regulator receiver; KEGG: rpb:RPB_0832 response regulator receiver domain protein; response regulator receiver complement(3208248..3208613) Methylobacterium extorquens PA1 5834755 YP_001640322.1 CDS Mext_2861 NC_010172.1 3208777 3209346 R TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: xau:Xaut_0023 hypoxanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase complement(3208777..3209346) Methylobacterium extorquens PA1 5835104 YP_001640323.1 CDS Mext_2862 NC_010172.1 3209535 3210356 R TIGRFAM: MJ0042 family finger-like protein; KEGG: bbt:BBta_1175 hypothetical protein; Zinc finger-domain-containing protein complement(3209535..3210356) Methylobacterium extorquens PA1 5835105 YP_001640324.1 CDS Mext_2863 NC_010172.1 3210400 3211161 D KEGG: xau:Xaut_0022 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE 3210400..3211161 Methylobacterium extorquens PA1 5835106 YP_001640325.1 CDS Mext_2864 NC_010172.1 3211158 3212138 D PFAM: protein of unknown function DUF214; KEGG: bja:blr1391 cell division protein; hypothetical protein 3211158..3212138 Methylobacterium extorquens PA1 5835107 YP_001640326.1 CDS Mext_2865 NC_010172.1 3212233 3213084 D PFAM: protein of unknown function DUF218; KEGG: rpd:RPD_0945 protein of unknown function DUF218; hypothetical protein 3212233..3213084 Methylobacterium extorquens PA1 5835108 YP_001640327.1 CDS Mext_2866 NC_010172.1 3213156 3213530 R PFAM: response regulator receiver; KEGG: bra:BRADO5751 putative response regulator receiver (CheY-like protein); response regulator receiver complement(3213156..3213530) Methylobacterium extorquens PA1 5835196 YP_001640328.1 CDS Mext_2867 NC_010172.1 3213802 3214935 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 3213802..3214935 Methylobacterium extorquens PA1 5835197 YP_001640329.1 CDS proA NC_010172.1 3215060 3216358 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 3215060..3216358 Methylobacterium extorquens PA1 5835198 YP_001640330.1 CDS Mext_2869 NC_010172.1 3216414 3216971 D TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; KEGG: mes:Meso_3455 nicotinate (nicotinamide) nucleotide adenylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 3216414..3216971 Methylobacterium extorquens PA1 5835199 YP_001640331.1 CDS Mext_2870 NC_010172.1 3217415 3217717 D TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: ccr:CC_3432 iojap-related protein; iojap family protein 3217415..3217717 Methylobacterium extorquens PA1 5835200 YP_001640332.1 CDS Mext_2871 NC_010172.1 3217726 3218424 R KEGG: bja:bll5262 hypothetical protein; hypothetical protein complement(3217726..3218424) Methylobacterium extorquens PA1 5835077 YP_001640333.1 CDS Mext_2872 NC_010172.1 3218475 3219035 R KEGG: bra:BRADO3253 conserved hypothetical protein; putative transcriptional regulatory protein; putative transcriptional regulatory protein complement(3218475..3219035) Methylobacterium extorquens PA1 5835078 YP_001640334.1 CDS Mext_2873 NC_010172.1 3219123 3220163 R PFAM: Aldose 1-epimerase; KEGG: kra:Krad_0621 aldose 1-epimerase; aldose 1-epimerase complement(3219123..3220163) Methylobacterium extorquens PA1 5835079 YP_001640335.1 CDS Mext_2874 NC_010172.1 3220259 3222052 R PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: gbe:GbCGDNIH1_1628 transporter; ABC transporter-like protein complement(3220259..3222052) Methylobacterium extorquens PA1 5835080 YP_001640336.1 CDS Mext_2875 NC_010172.1 3222326 3223255 D PFAM: periplasmic solute binding protein; KEGG: xau:Xaut_4709 periplasmic solute binding protein; periplasmic solute binding protein 3222326..3223255 Methylobacterium extorquens PA1 5835081 YP_001640337.1 CDS Mext_2876 NC_010172.1 3223378 3223629 R TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: nwi:Nwi_2524 molybdopterin converting factor, subunit 1; molybdopterin converting factor subunit 1 complement(3223378..3223629) Methylobacterium extorquens PA1 5834872 YP_001640338.1 CDS Mext_2877 NC_010172.1 3223684 3224382 R TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: xau:Xaut_2345 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(3223684..3224382) Methylobacterium extorquens PA1 5834873 YP_001640339.1 CDS Mext_2878 NC_010172.1 3224369 3226417 R TIGRFAM: excinuclease ABC, C subunit; PFAM: Excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: oan:Oant_2589 excinuclease ABC, C subunit; excinuclease ABC subunit C complement(3224369..3226417) Methylobacterium extorquens PA1 5834874 YP_001640340.1 CDS Mext_2879 NC_010172.1 3226513 3227238 R KEGG: rpe:RPE_0865 hypothetical protein; hypothetical protein complement(3226513..3227238) Methylobacterium extorquens PA1 5834875 YP_001640341.1 CDS Mext_2880 NC_010172.1 3227468 3228190 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bbt:BBta_1675 putative ErfK/YbiS/YcfS/YnhG protein family; ErfK/YbiS/YcfS/YnhG family protein 3227468..3228190 Methylobacterium extorquens PA1 5834876 YP_001640342.1 CDS Mext_2881 NC_010172.1 3228270 3229001 R KEGG: xau:Xaut_1890 putative periplasmic ligand-binding sensor protein; putative periplasmic ligand-binding sensor protein complement(3228270..3229001) Methylobacterium extorquens PA1 5835191 YP_001640343.1 CDS Mext_2882 NC_010172.1 3229330 3230202 R KEGG: xau:Xaut_2341 porin; porin complement(3229330..3230202) Methylobacterium extorquens PA1 5835192 YP_001640344.1 CDS Mext_2883 NC_010172.1 3230599 3231366 R PFAM: protein of unknown function DUF152; KEGG: rpa:RPA4360 DUF152; hypothetical protein complement(3230599..3231366) Methylobacterium extorquens PA1 5835193 YP_001640345.1 CDS Mext_2884 NC_010172.1 3231408 3232493 R PFAM: protein of unknown function DUF185; KEGG: xau:Xaut_2549 protein of unknown function DUF185; hypothetical protein complement(3231408..3232493) Methylobacterium extorquens PA1 5835194 YP_001640346.1 CDS Mext_2885 NC_010172.1 3232496 3233386 R PFAM: prolipoprotein diacylglyceryl transferase; KEGG: xau:Xaut_2548 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase complement(3232496..3233386) Methylobacterium extorquens PA1 5835195 YP_001640347.1 CDS Mext_2886 NC_010172.1 3233528 3234208 D PFAM: MgtC/SapB transporter; KEGG: bvi:Bcep1808_3670 MgtC/SapB transporter; MgtC/SapB transporter 3233528..3234208 Methylobacterium extorquens PA1 5835066 YP_001640348.1 CDS Mext_2887 NC_010172.1 3234312 3235943 D catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 3234312..3235943 Methylobacterium extorquens PA1 5835067 YP_001640349.1 CDS Mext_2888 NC_010172.1 3235940 3237211 D KEGG: rle:pRL120796 hypothetical protein; hypothetical protein 3235940..3237211 Methylobacterium extorquens PA1 5835068 YP_001640350.1 CDS Mext_2889 NC_010172.1 3237385 3238290 R PFAM: cell wall hydrolase SleB; KEGG: bmb:BruAb1_0404 hypothetical protein; cell wall hydrolase SleB complement(3237385..3238290) Methylobacterium extorquens PA1 5835069 YP_001640351.1 CDS Mext_2890 NC_010172.1 3238397 3238654 R hypothetical protein complement(3238397..3238654) Methylobacterium extorquens PA1 5835070 YP_001640352.1 CDS Mext_2891 NC_010172.1 3238841 3241507 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase complement(3238841..3241507) Methylobacterium extorquens PA1 5833967 YP_001640353.1 CDS Mext_2892 NC_010172.1 3241725 3241877 R KEGG: rpa:RPA1050 hypothetical protein; hypothetical protein complement(3241725..3241877) Methylobacterium extorquens PA1 5833968 YP_001640354.1 CDS Mext_2893 NC_010172.1 3242113 3242790 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: xau:Xaut_1215 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(3242113..3242790) Methylobacterium extorquens PA1 5833969 YP_001640355.1 CDS Mext_2894 NC_010172.1 3242977 3243420 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: xau:Xaut_3833 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3242977..3243420 Methylobacterium extorquens PA1 5833970 YP_001640356.1 CDS Mext_2895 NC_010172.1 3243517 3243777 D hypothetical protein 3243517..3243777 Methylobacterium extorquens PA1 5833971 YP_001640357.1 CDS Mext_2896 NC_010172.1 3243823 3244407 R PFAM: cyclic nucleotide-binding; KEGG: atc:AGR_C_4670 hypothetical protein; cyclic nucleotide-binding protein complement(3243823..3244407) Methylobacterium extorquens PA1 5834680 YP_001640358.1 CDS Mext_2898 NC_010172.1 3244867 3245055 D KEGG: rru:Rru_A3018 hypothetical protein; hypothetical protein 3244867..3245055 Methylobacterium extorquens PA1 5834682 YP_001640359.1 CDS Mext_2899 NC_010172.1 3245178 3245651 R PFAM: regulatory protein MarR; transcriptional regulator TrmB; KEGG: sil:SPOA0405 transcriptional regulator, MarR family; regulatory protein MarR complement(3245178..3245651) Methylobacterium extorquens PA1 5834683 YP_001640360.1 CDS Mext_2900 NC_010172.1 3245776 3246555 D KEGG: nwi:Nwi_0614 hypothetical protein; hypothetical protein 3245776..3246555 Methylobacterium extorquens PA1 5834684 YP_001640361.1 CDS Mext_2901 NC_010172.1 3246575 3247507 R PFAM: beta-lactamase domain protein; KEGG: rle:RL1093 putative beta-lactamase family protein; beta-lactamase domain-containing protein complement(3246575..3247507) Methylobacterium extorquens PA1 5834354 YP_001640362.1 CDS Mext_2902 NC_010172.1 3247587 3248618 R KEGG: xau:Xaut_4721 hypothetical protein; hypothetical protein complement(3247587..3248618) Methylobacterium extorquens PA1 5834355 YP_001640363.1 CDS Mext_2903 NC_010172.1 3249318 3249494 D PFAM: protein of unknown function DUF1328; KEGG: rpb:RPB_2024 protein of unknown function DUF1328; hypothetical protein 3249318..3249494 Methylobacterium extorquens PA1 5834356 YP_001640364.1 CDS Mext_2904 NC_010172.1 3249573 3249722 R KEGG: rpd:RPD_1367 hypothetical protein; hypothetical protein complement(3249573..3249722) Methylobacterium extorquens PA1 5834357 YP_001640365.1 CDS Mext_2905 NC_010172.1 3249896 3250777 D in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 3249896..3250777 Methylobacterium extorquens PA1 5834358 YP_001640366.1 CDS Mext_2906 NC_010172.1 3251238 3251600 D hypothetical protein 3251238..3251600 Methylobacterium extorquens PA1 5832457 YP_001640367.1 CDS Mext_2907 NC_010172.1 3251700 3252239 R PFAM: protein of unknown function UPF0153; KEGG: bja:blr5563 hypothetical protein; hypothetical protein complement(3251700..3252239) Methylobacterium extorquens PA1 5832458 YP_001640368.1 CDS Mext_2908 NC_010172.1 3252296 3253753 D PFAM: aminotransferase class-III; KEGG: pla:Plav_0797 aminotransferase class-III; class III aminotransferase 3252296..3253753 Methylobacterium extorquens PA1 5832459 YP_001640369.1 CDS Mext_2909 NC_010172.1 3253967 3254329 D hypothetical protein 3253967..3254329 Methylobacterium extorquens PA1 5832460 YP_001640370.1 CDS Mext_2910 NC_010172.1 3254367 3255281 D PFAM: metallophosphoesterase; KEGG: mlo:mll3894 hypothetical protein; metallophosphoesterase 3254367..3255281 Methylobacterium extorquens PA1 5832461 YP_001640371.1 CDS Mext_2911 NC_010172.1 3255297 3255515 R hypothetical protein complement(3255297..3255515) Methylobacterium extorquens PA1 5833645 YP_001640372.1 CDS Mext_2912 NC_010172.1 3255572 3256009 R PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_0311 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3255572..3256009) Methylobacterium extorquens PA1 5833646 YP_001640373.1 CDS Mext_2913 NC_010172.1 3256006 3256932 R PFAM: HhH-GPD family protein; AlkA domain protein; KEGG: rru:Rru_A3357 transcriptional regulator, AraC family; alcohol dehydrogenase complement(3256006..3256932) Methylobacterium extorquens PA1 5833647 YP_001640374.1 CDS Mext_2914 NC_010172.1 3256982 3257269 R hypothetical protein complement(3256982..3257269) Methylobacterium extorquens PA1 5833648 YP_001640375.1 CDS Mext_2915 NC_010172.1 3257431 3258585 R TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: rpd:RPD_2949 ribonuclease D; ribonuclease D complement(3257431..3258585) Methylobacterium extorquens PA1 5833649 YP_001640376.1 CDS Mext_2916 NC_010172.1 3258681 3259070 R hypothetical protein complement(3258681..3259070) Methylobacterium extorquens PA1 5832980 YP_001640377.1 CDS Mext_2917 NC_010172.1 3259240 3260496 D PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: nha:Nham_2011 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 3259240..3260496 Methylobacterium extorquens PA1 5832981 YP_001640378.1 CDS Mext_2918 NC_010172.1 3260536 3262434 R PFAM: AsmA family protein; KEGG: rpe:RPE_4079 AsmA family protein; AsmA family protein complement(3260536..3262434) Methylobacterium extorquens PA1 5832982 YP_001640379.1 CDS Mext_2919 NC_010172.1 3262820 3263557 D KEGG: bbt:BBta_6830 acetyl-CoA/acetoacetyl-CoA transferase, alpha subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 3262820..3263557 Methylobacterium extorquens PA1 5832983 YP_001640380.1 CDS Mext_2920 NC_010172.1 3263666 3264325 D KEGG: nha:Nham_1247 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 3263666..3264325 Methylobacterium extorquens PA1 5832984 YP_001640381.1 CDS Mext_2921 NC_010172.1 3264497 3264904 D hypothetical protein 3264497..3264904 Methylobacterium extorquens PA1 5831853 YP_001640382.1 CDS Mext_2922 NC_010172.1 3265078 3265452 D hypothetical protein 3265078..3265452 Methylobacterium extorquens PA1 5831854 YP_001640383.1 CDS Mext_2923 NC_010172.1 3265492 3266874 D PFAM: PepSY-associated TM helix domain protein; KEGG: rle:RL0896 putative transmembrane transporter; PepSY-associated TM helix domain-containing protein 3265492..3266874 Methylobacterium extorquens PA1 5831855 YP_001640384.1 CDS Mext_2924 NC_010172.1 3266935 3269265 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nwi:Nwi_2902 TonB-dependent receptor; TonB-dependent receptor 3266935..3269265 Methylobacterium extorquens PA1 5831856 YP_001640385.1 CDS Mext_2925 NC_010172.1 3269331 3270287 R KEGG: pde:Pden_1366 hypothetical protein; hypothetical protein complement(3269331..3270287) Methylobacterium extorquens PA1 5831857 YP_001640386.1 CDS Mext_2926 NC_010172.1 3270262 3271077 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sal:Sala_1001 ABC transporter related; ABC transporter-like protein complement(3270262..3271077) Methylobacterium extorquens PA1 5831397 YP_001640387.1 CDS Mext_2927 NC_010172.1 3271074 3272114 R PFAM: transport system permease protein; KEGG: mes:Meso_2065 transport system permease protein; transport system permease complement(3271074..3272114) Methylobacterium extorquens PA1 5831398 YP_001640388.1 CDS Mext_2928 NC_010172.1 3272111 3272944 R PFAM: periplasmic binding protein; KEGG: rsp:RSP_2403 ABC cobalamin/Fe3+-siderophore transporter, periplasmic substrate-binding subunit; periplasmic binding protein complement(3272111..3272944) Methylobacterium extorquens PA1 5831399 YP_001640389.1 CDS Mext_2929 NC_010172.1 3273216 3273458 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: mes:Meso_4551 prevent-host-death family protein; prevent-host-death family protein 3273216..3273458 Methylobacterium extorquens PA1 5831400 YP_001640390.1 CDS Mext_2930 NC_010172.1 3273458 3273883 D PFAM: PilT protein domain protein; KEGG: sme:SMc00393 hypothetical/unknown protein; PilT domain-containing protein 3273458..3273883 Methylobacterium extorquens PA1 5831401 YP_001640391.1 CDS guaA NC_010172.1 3273933 3275498 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(3273933..3275498) Methylobacterium extorquens PA1 5832064 YP_001640392.1 CDS Mext_2932 NC_010172.1 3276076 3276687 R PFAM: phosphoesterase PA-phosphatase related; KEGG: plt:Plut_0466 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase complement(3276076..3276687) Methylobacterium extorquens PA1 5832065 YP_001640393.1 CDS Mext_2933 NC_010172.1 3276784 3277812 R KEGG: atc:AGR_C_2981 hypothetical protein; hypothetical protein complement(3276784..3277812) Methylobacterium extorquens PA1 5832066 YP_001640394.1 CDS Mext_2934 NC_010172.1 3277948 3279327 R PFAM: Fmu (Sun) domain protein; KEGG: rpc:RPC_3064 Fmu (Sun); Fmu (Sun) domain-containing protein complement(3277948..3279327) Methylobacterium extorquens PA1 5832067 YP_001640395.1 CDS Mext_2935 NC_010172.1 3279393 3279581 D hypothetical protein 3279393..3279581 Methylobacterium extorquens PA1 5832068 YP_001640396.1 CDS Mext_2936 NC_010172.1 3279685 3280623 R KEGG: rpc:RPC_0016 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase complement(3279685..3280623) Methylobacterium extorquens PA1 5833268 YP_001640397.1 CDS Mext_2937 NC_010172.1 3280830 3281714 D KEGG: bja:blr3862 hypothetical protein; hypothetical protein 3280830..3281714 Methylobacterium extorquens PA1 5833269 YP_001640398.1 CDS Mext_2938 NC_010172.1 3282038 3282883 D hypothetical protein 3282038..3282883 Methylobacterium extorquens PA1 5833270 YP_001640399.1 CDS Mext_2939 NC_010172.1 3283393 3284883 R KEGG: xau:Xaut_3123 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase complement(3283393..3284883) Methylobacterium extorquens PA1 5833271 YP_001640400.1 CDS Mext_2940 NC_010172.1 3285147 3286313 D PFAM: cell cycle protein; KEGG: bbt:BBta_6175 essential cell division protein (stabilizes FtsZ ring); cell cycle protein 3285147..3286313 Methylobacterium extorquens PA1 5833272 YP_001640401.1 CDS Mext_2941 NC_010172.1 3286310 3287419 D KEGG: xau:Xaut_1191 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 3286310..3287419 Methylobacterium extorquens PA1 5833792 YP_001640402.1 CDS murC NC_010172.1 3287561 3288967 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 3287561..3288967 Methylobacterium extorquens PA1 5833793 YP_001640403.1 CDS Mext_2943 NC_010172.1 3288984 3289373 R KEGG: bbt:BBta_6629 putative phage-related transcriptional regulator; putative phage-related transcriptional regulator complement(3288984..3289373) Methylobacterium extorquens PA1 5833794 YP_001640404.1 CDS Mext_2944 NC_010172.1 3289384 3289590 R KEGG: bbt:BBta_6628 hypothetical protein; hypothetical protein complement(3289384..3289590) Methylobacterium extorquens PA1 5833795 YP_001640405.1 CDS Mext_2945 NC_010172.1 3289686 3290615 D KEGG: rpc:RPC_3304 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 3289686..3290615 Methylobacterium extorquens PA1 5833796 YP_001640406.1 CDS ddl NC_010172.1 3290659 3291582 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 3290659..3291582 Methylobacterium extorquens PA1 5831447 YP_001640407.1 CDS Mext_2947 NC_010172.1 3291549 3292487 D PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: nha:Nham_1284 cell division protein FtsQ; polypeptide-transport-associated domain-containing protein 3291549..3292487 Methylobacterium extorquens PA1 5831448 YP_001640408.1 CDS Mext_2948 NC_010172.1 3292613 3293872 D PFAM: cell division protein FtsA; KEGG: bov:BOV_1383 cell division protein FtsA; cell division protein FtsA 3292613..3293872 Methylobacterium extorquens PA1 5831449 YP_001640409.1 CDS Mext_2949 NC_010172.1 3294078 3295835 D TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: nwi:Nwi_1058 cell division protein FtsZ; cell division protein FtsZ 3294078..3295835 Methylobacterium extorquens PA1 5831450 YP_001640410.1 CDS lpxC NC_010172.1 3296187 3297134 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3296187..3297134 Methylobacterium extorquens PA1 5831451 YP_001640411.1 CDS Mext_2951 NC_010172.1 3297300 3298175 D KEGG: rpa:RPA3520 putative lipoprotein; putative lipoprotein 3297300..3298175 Methylobacterium extorquens PA1 5833319 YP_001640412.1 CDS Mext_2952 NC_010172.1 3298183 3298440 R hypothetical protein complement(3298183..3298440) Methylobacterium extorquens PA1 5833320 YP_001640413.1 CDS Mext_2953 NC_010172.1 3298444 3299430 R KEGG: acr:Acry_1197 hypothetical protein; hypothetical protein complement(3298444..3299430) Methylobacterium extorquens PA1 5833321 YP_001640414.1 CDS Mext_2954 NC_010172.1 3299586 3301286 D TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: bja:bll6593 DNA repair protein; DNA repair protein RecN 3299586..3301286 Methylobacterium extorquens PA1 5833322 YP_001640415.1 CDS Mext_2955 NC_010172.1 3301283 3301576 R hypothetical protein complement(3301283..3301576) Methylobacterium extorquens PA1 5833323 YP_001640416.1 CDS Mext_2956 NC_010172.1 3301660 3301932 R PFAM: YiaAB two helix domain protein; KEGG: bbt:BBta_1638 putative exported protein of unknown function with YiaA/B two helix domain; YiaAB two helix domain-containing protein complement(3301660..3301932) Methylobacterium extorquens PA1 5833420 YP_001640417.1 CDS Mext_2957 NC_010172.1 3301964 3302656 R PFAM: PspA/IM30 family protein; KEGG: bja:bll7613 hypothetical protein; PspA/IM30 family protein complement(3301964..3302656) Methylobacterium extorquens PA1 5833421 YP_001640418.1 CDS Mext_2958 NC_010172.1 3302798 3305149 R TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: rpc:RPC_1201 oxidoreductase alpha (molybdopterin) subunit; oxidoreductase alpha (molybdopterin) subunit complement(3302798..3305149) Methylobacterium extorquens PA1 5833422 YP_001640419.1 CDS Mext_2959 NC_010172.1 3305216 3306292 R hypothetical protein complement(3305216..3306292) Methylobacterium extorquens PA1 5833423 YP_001640420.1 CDS Mext_2960 NC_010172.1 3306638 3308557 D KEGG: bov:BOV_2041 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; chaperone protein DnaK 3306638..3308557 Methylobacterium extorquens PA1 5833424 YP_001640421.1 CDS Mext_2961 NC_010172.1 3308809 3309966 D TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: ret:RHE_CH00144 molecular chaperone protein, DnaJ family; chaperone protein DnaJ 3308809..3309966 Methylobacterium extorquens PA1 5830993 YP_001640422.1 CDS Mext_2962 NC_010172.1 3310125 3310781 D KEGG: bra:BRADO0162 phospholipid N-methyltransferase; phospholipid N-methyltransferase 3310125..3310781 Methylobacterium extorquens PA1 5830994 YP_001640423.1 CDS Mext_2963 NC_010172.1 3311062 3311373 D KEGG: bra:BRADO4327 conserved hypothetical protein; putative secreted protein; hypothetical protein 3311062..3311373 Methylobacterium extorquens PA1 5830995 YP_001640424.1 CDS Mext_2964 NC_010172.1 3311400 3312710 R KEGG: bch:Bcen2424_6240 thymidine phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; thymidine phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; thymidine phosphorylase complement(3311400..3312710) Methylobacterium extorquens PA1 5830996 YP_001640425.1 CDS Mext_2965 NC_010172.1 3312707 3313480 R KEGG: ret:RHE_CH00193 2-deoxyribose-5-phosphate aldolase protein; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase complement(3312707..3313480) Methylobacterium extorquens PA1 5830997 YP_001640426.1 CDS Mext_2966 NC_010172.1 3313490 3314302 R catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase complement(3313490..3314302) Methylobacterium extorquens PA1 5835562 YP_001640427.1 CDS Mext_2967 NC_010172.1 3314292 3314705 R TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rsp:RSP_1594 cytidine deaminase; cytidine deaminase complement(3314292..3314705) Methylobacterium extorquens PA1 5835563 YP_001640428.1 CDS Mext_2968 NC_010172.1 3314850 3315074 D KEGG: xau:Xaut_1414 hypothetical protein; hypothetical protein 3314850..3315074 Methylobacterium extorquens PA1 5835564 YP_001640429.1 CDS Mext_2969 NC_010172.1 3315157 3316140 R KEGG: rpa:RPA1159 putative tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase complement(3315157..3316140) Methylobacterium extorquens PA1 5835565 YP_001640430.1 CDS Mext_2970 NC_010172.1 3316148 3317452 R PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: nwi:Nwi_2556 three-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase complement(3316148..3317452) Methylobacterium extorquens PA1 5835566 YP_001640431.1 CDS Mext_2971 NC_010172.1 3317449 3318198 R PFAM: protein of unknown function DUF374; KEGG: nwi:Nwi_2557 protein of unknown function DUF374; hypothetical protein complement(3317449..3318198) Methylobacterium extorquens PA1 5835545 YP_001640432.1 CDS Mext_2972 NC_010172.1 3318387 3319382 D PFAM: metallophosphoesterase; KEGG: nwi:Nwi_2634 metallophosphoesterase; metallophosphoesterase 3318387..3319382 Methylobacterium extorquens PA1 5835546 YP_001640433.1 CDS Mext_2973 NC_010172.1 3319398 3319874 R PFAM: response regulator receiver; KEGG: mmr:Mmar10_0951 response regulator receiver protein; response regulator receiver complement(3319398..3319874) Methylobacterium extorquens PA1 5835547 YP_001640434.1 CDS Mext_2974 NC_010172.1 3320256 3321101 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: xau:Xaut_0192 putative cold-shock DNA-binding domain protein; DNA-binding cold-shock protein 3320256..3321101 Methylobacterium extorquens PA1 5835548 YP_001640435.1 CDS Mext_2975 NC_010172.1 3321229 3321474 D hypothetical protein 3321229..3321474 Methylobacterium extorquens PA1 5835549 YP_001640436.1 CDS Mext_2976 NC_010172.1 3321501 3322910 R PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bja:bll1431 aminopeptidase; leucyl aminopeptidase complement(3321501..3322910) Methylobacterium extorquens PA1 5835525 YP_001640437.1 CDS Mext_2977 NC_010172.1 3323008 3323856 D PFAM: Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpe:RPE_3757 tetratricopeptide TPR_2 repeat protein; hypothetical protein 3323008..3323856 Methylobacterium extorquens PA1 5835526 YP_001640438.1 CDS rpmB NC_010172.1 3324042 3324347 D required for 70S ribosome assembly; 50S ribosomal protein L28 3324042..3324347 Methylobacterium extorquens PA1 5835527 YP_001640439.1 CDS Mext_2979 NC_010172.1 3324461 3325390 D PFAM: Auxin Efflux Carrier; KEGG: xau:Xaut_3839 auxin efflux carrier; auxin efflux carrier 3324461..3325390 Methylobacterium extorquens PA1 5835528 YP_001640440.1 CDS lysK NC_010172.1 3325644 3327392 D class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; lysyl-tRNA synthetase 3325644..3327392 Methylobacterium extorquens PA1 5835529 YP_001640441.1 CDS Mext_2981 NC_010172.1 3327539 3328093 R KEGG: bja:bll2420 hypothetical protein; hypothetical protein complement(3327539..3328093) Methylobacterium extorquens PA1 5835485 YP_001640442.1 CDS Mext_2982 NC_010172.1 3328273 3329238 D TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: ret:RHE_CH01648 peptide chain release factor 2 protein; peptide chain release factor 2 3328273..3329238 Methylobacterium extorquens PA1 5835486 YP_001640443.1 CDS Mext_2983 NC_010172.1 3329383 3330561 R PFAM: peptidase M23B; KEGG: nwi:Nwi_1671 peptidase M23B; peptidase M23B complement(3329383..3330561) Methylobacterium extorquens PA1 5835487 YP_001640444.1 CDS Mext_2984 NC_010172.1 3330736 3331245 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: smd:Smed_1475 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase complement(3330736..3331245) Methylobacterium extorquens PA1 5835488 YP_001640445.1 CDS Mext_2985 NC_010172.1 3331282 3334809 D KEGG: bra:BRADO3530 hypothetical protein; hypothetical protein 3331282..3334809 Methylobacterium extorquens PA1 5835489 YP_001640446.1 CDS Mext_2986 NC_010172.1 3335407 3336483 D PFAM: fatty acid desaturase; KEGG: pla:Plav_3282 fatty acid desaturase; fatty acid desaturase 3335407..3336483 Methylobacterium extorquens PA1 5835480 YP_001640447.1 CDS Mext_2987 NC_010172.1 3336545 3337816 R KEGG: rpb:RPB_2998 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tyrosyl-tRNA synthetase complement(3336545..3337816) Methylobacterium extorquens PA1 5835481 YP_001640448.1 CDS anmK NC_010172.1 3337963 3339090 D catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 3337963..3339090 Methylobacterium extorquens PA1 5835482 YP_001640449.1 CDS Mext_2989 NC_010172.1 3339100 3339693 D KEGG: cjk:jk1234 hypothetical protein; hypothetical protein 3339100..3339693 Methylobacterium extorquens PA1 5835483 YP_001640450.1 CDS Mext_2990 NC_010172.1 3339759 3340859 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 3339759..3340859 Methylobacterium extorquens PA1 5835484 YP_001640451.1 CDS Mext_2991 NC_010172.1 3340925 3342067 D TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: xau:Xaut_4136 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 3340925..3342067 Methylobacterium extorquens PA1 5835300 YP_001640452.1 CDS Mext_2992 NC_010172.1 3342173 3342406 D hypothetical protein 3342173..3342406 Methylobacterium extorquens PA1 5835301 YP_001640453.1 CDS Mext_2993 NC_010172.1 3342431 3343417 R PFAM: histone deacetylase superfamily; KEGG: nha:Nham_0780 histone deacetylase superfamily; histone deacetylase superfamily protein complement(3342431..3343417) Methylobacterium extorquens PA1 5835302 YP_001640454.1 CDS Mext_2994 NC_010172.1 3343815 3344297 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: nwi:Nwi_2891 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 3343815..3344297 Methylobacterium extorquens PA1 5835303 YP_001640455.1 CDS Mext_2995 NC_010172.1 3344377 3344928 D KEGG: mlo:mll0880 hypothetical protein; hypothetical protein 3344377..3344928 Methylobacterium extorquens PA1 5835304 YP_001640456.1 CDS Mext_2996 NC_010172.1 3345105 3347159 D PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: xau:Xaut_4726 carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthase L chain ATP-binding 3345105..3347159 Methylobacterium extorquens PA1 5835359 YP_001640457.1 CDS Mext_2997 NC_010172.1 3347348 3347779 D PFAM: AIG2 family protein; KEGG: sen:SACE_6527 hypothetical protein; AIG2 family protein 3347348..3347779 Methylobacterium extorquens PA1 5835360 YP_001640458.1 CDS Mext_2998 NC_010172.1 3348054 3348338 D PFAM: acylphosphatase; KEGG: ath:AT5G03370 acylphosphatase family; acylphosphatase 3348054..3348338 Methylobacterium extorquens PA1 5835361 YP_001640459.1 CDS Mext_2999 NC_010172.1 3348440 3349153 D PFAM: protein of unknown function DUF599; KEGG: bja:blr5168 hypothetical protein; hypothetical protein 3348440..3349153 Methylobacterium extorquens PA1 5835362 YP_001640460.1 CDS Mext_3000 NC_010172.1 3349143 3349406 D KEGG: rpc:RPC_3337 hypothetical protein; hypothetical protein 3349143..3349406 Methylobacterium extorquens PA1 5835363 YP_001640461.1 CDS Mext_3001 NC_010172.1 3349414 3350250 R PFAM: protein of unknown function DUF218; KEGG: xau:Xaut_4460 protein of unknown function DUF218; hypothetical protein complement(3349414..3350250) Methylobacterium extorquens PA1 5835373 YP_001640462.1 CDS Mext_3002 NC_010172.1 3350273 3350896 R PFAM: Glutathione S-transferase domain; KEGG: rso:RSc0984 probable GST-related protein; glutathione S-transferase domain-containing protein complement(3350273..3350896) Methylobacterium extorquens PA1 5835374 YP_001640463.1 CDS Mext_3003 NC_010172.1 3350893 3351954 R KEGG: ccr:CC_0716 L-lysine 2,3-aminomutase, putative; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein complement(3350893..3351954) Methylobacterium extorquens PA1 5835375 YP_001640464.1 CDS Mext_3004 NC_010172.1 3351951 3353009 R PFAM: tRNA synthetase class II (D K and N); KEGG: mlo:mlr8260 lysyl-tRNA synthetase; tRNA synthetase class II (D K and N) complement(3351951..3353009) Methylobacterium extorquens PA1 5835376 YP_001640465.1 CDS Mext_3005 NC_010172.1 3353139 3353699 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 3353139..3353699 Methylobacterium extorquens PA1 5835377 YP_001640466.1 CDS Mext_3006 NC_010172.1 3353703 3354689 R PFAM: protein of unknown function DUF1624; KEGG: atc:AGR_C_2846 hypothetical protein; hypothetical protein complement(3353703..3354689) Methylobacterium extorquens PA1 5835378 YP_001640467.1 CDS Mext_3007 NC_010172.1 3355049 3355657 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rpb:RPB_2938 cold-shock DNA-binding domain protein; DNA-binding cold-shock protein 3355049..3355657 Methylobacterium extorquens PA1 5835379 YP_001640468.1 CDS Mext_3008 NC_010172.1 3355669 3356163 D PFAM: protein of unknown function DUF192; KEGG: rpb:RPB_2937 protein of unknown function DUF192; hypothetical protein 3355669..3356163 Methylobacterium extorquens PA1 5835380 YP_001640469.1 CDS bchD NC_010172.1 3356169 3357917 D involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; part of a complex with BchI, BchD, and BchH; magnesium chelatase subunit D 3356169..3357917 Methylobacterium extorquens PA1 5835381 YP_001640470.1 CDS Mext_3010 NC_010172.1 3357932 3358831 D TIGRFAM: magnesium chelatase accessory protein; PFAM: alpha/beta hydrolase fold; KEGG: rpd:RPD_3767 alpha/beta hydrolase fold; magnesium chelatase accessory protein 3357932..3358831 Methylobacterium extorquens PA1 5835382 YP_001640471.1 CDS Mext_3011 NC_010172.1 3358876 3360402 D TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bbt:BBta_6445 phytoene dehydrogenase (phytoene desaturase); phytoene desaturase 3358876..3360402 Methylobacterium extorquens PA1 5835396 YP_001640472.1 CDS Mext_3012 NC_010172.1 3360383 3361444 D PFAM: Squalene/phytoene synthase; KEGG: rru:Rru_A0494 squalene/phytoene synthase; squalene/phytoene synthase 3360383..3361444 Methylobacterium extorquens PA1 5835397 YP_001640473.1 CDS Mext_3013 NC_010172.1 3361716 3362330 R TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: xau:Xaut_4160 urease accessory protein UreG; urease accessory protein UreG complement(3361716..3362330) Methylobacterium extorquens PA1 5835398 YP_001640474.1 CDS Mext_3014 NC_010172.1 3362346 3363080 R PFAM: Urease accessory protein UreF; KEGG: xau:Xaut_4159 urease accessory protein UreF; urease accessory protein UreF complement(3362346..3363080) Methylobacterium extorquens PA1 5835399 YP_001640475.1 CDS Mext_3015 NC_010172.1 3363013 3363504 R PFAM: UreE urease accessory domain protein; KEGG: bbt:BBta_7007 urease accessory protein UreE; UreE urease accessory domain-containing protein complement(3363013..3363504) Methylobacterium extorquens PA1 5835400 YP_001640476.1 CDS ureC NC_010172.1 3363508 3365220 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(3363508..3365220) Methylobacterium extorquens PA1 5835420 YP_001640477.1 CDS Mext_3017 NC_010172.1 3365296 3366201 R PFAM: protein of unknown function DUF1003; KEGG: mlo:mlr4962 hypothetical protein; hypothetical protein complement(3365296..3366201) Methylobacterium extorquens PA1 5835421 YP_001640478.1 CDS Mext_3018 NC_010172.1 3366284 3366844 R PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rpe:RPE_3733 metal dependent phosphohydrolase; metal-dependent phosphohydrolase complement(3366284..3366844) Methylobacterium extorquens PA1 5835422 YP_001640479.1 CDS Mext_3019 NC_010172.1 3366841 3367461 R KEGG: xau:Xaut_4155 urease, gamma subunit; TIGRFAM: urease, beta subunit; urease, gamma subunit; PFAM: Urease beta subunit; Urease gamma subunit region; urease subunit gamma complement(3366841..3367461) Methylobacterium extorquens PA1 5835423 YP_001640480.1 CDS Mext_3020 NC_010172.1 3367542 3368558 R PFAM: Urease accessory protein UreD; KEGG: xau:Xaut_4154 urease accessory protein UreD; urease accessory protein UreD complement(3367542..3368558) Methylobacterium extorquens PA1 5835424 YP_001640481.1 CDS Mext_3021 NC_010172.1 3368681 3369199 D PFAM: flavin reductase domain protein FMN-binding; KEGG: atc:AGR_C_4534 putative flavin reductase; flavin reductase domain-containing protein 3368681..3369199 Methylobacterium extorquens PA1 5835452 YP_001640482.1 CDS Mext_3022 NC_010172.1 3369358 3369606 R hypothetical protein complement(3369358..3369606) Methylobacterium extorquens PA1 5835453 YP_001640483.1 CDS Mext_3023 NC_010172.1 3369995 3370216 D KEGG: bja:bll6163 hypothetical protein; hypothetical protein 3369995..3370216 Methylobacterium extorquens PA1 5835454 YP_001640484.1 CDS Mext_3024 NC_010172.1 3370219 3371577 R catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase complement(3370219..3371577) Methylobacterium extorquens PA1 5835455 YP_001640485.1 CDS Mext_3025 NC_010172.1 3371957 3372577 D KEGG: syr:SynRCC307_1970 translation initiation factor IF-2; hypothetical protein 3371957..3372577 Methylobacterium extorquens PA1 5835456 YP_001640486.1 CDS Mext_3026 NC_010172.1 3372654 3372887 R hypothetical protein complement(3372654..3372887) Methylobacterium extorquens PA1 5835462 YP_001640487.1 CDS Mext_3027 NC_010172.1 3373431 3374444 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rle:RL3677 putative UDP-glucuronate 5'-epimerase; NAD-dependent epimerase/dehydratase 3373431..3374444 Methylobacterium extorquens PA1 5835463 YP_001640488.1 CDS Mext_3028 NC_010172.1 3374677 3375993 D KEGG: xau:Xaut_3551 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 3374677..3375993 Methylobacterium extorquens PA1 5835464 YP_001640489.1 CDS Mext_3029 NC_010172.1 3376048 3376392 R KEGG: bov:BOV_1140 hypothetical protein; hypothetical protein complement(3376048..3376392) Methylobacterium extorquens PA1 5835465 YP_001640490.1 CDS Mext_3030 NC_010172.1 3377114 3377341 D hypothetical protein 3377114..3377341 Methylobacterium extorquens PA1 5835466 YP_001640491.1 CDS Mext_3031 NC_010172.1 3377652 3377924 D hypothetical protein 3377652..3377924 Methylobacterium extorquens PA1 5835500 YP_001640492.1 CDS Mext_3032 NC_010172.1 3378046 3379698 R TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Threonine dehydratase domain protein; Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pmy:Pmen_4221 threonine dehydratase, biosynthetic; threonine dehydratase, biosynthetic complement(3378046..3379698) Methylobacterium extorquens PA1 5835501 YP_001640493.1 CDS Mext_3033 NC_010172.1 3379679 3380269 R PFAM: type IV pilus assembly PilZ; KEGG: mlo:mll0185 hypothetical protein; type IV pilus assembly PilZ complement(3379679..3380269) Methylobacterium extorquens PA1 5835502 YP_001640494.1 CDS Mext_3034 NC_010172.1 3380692 3380910 D PFAM: SlyX family protein; KEGG: nha:Nham_1077 SlyX; SlyX family protein 3380692..3380910 Methylobacterium extorquens PA1 5835503 YP_001640495.1 CDS Mext_3035 NC_010172.1 3380946 3381260 D hypothetical protein 3380946..3381260 Methylobacterium extorquens PA1 5835504 YP_001640496.1 CDS Mext_3036 NC_010172.1 3381282 3381701 R TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: bmb:BruAb1_1041 DksA, DnaK suppressor protein; RNA polymerase-binding protein DksA complement(3381282..3381701) Methylobacterium extorquens PA1 5835505 YP_001640497.1 CDS Mext_3037 NC_010172.1 3381955 3383010 R KEGG: bra:BRADO5638 hypothetical protein; hypothetical protein complement(3381955..3383010) Methylobacterium extorquens PA1 5835506 YP_001640498.1 CDS Mext_3038 NC_010172.1 3382976 3384349 R PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: bra:BRADO5639 putative membrane bound O-acyl transferase (MBOAT) family protein; putative alginate O-acetyltransferase; membrane bound O-acyl transferase MBOAT family protein complement(3382976..3384349) Methylobacterium extorquens PA1 5835507 YP_001640499.1 CDS Mext_3039 NC_010172.1 3384721 3385017 D KEGG: bbt:BBta_6132 putative exported protein of unknown function; hypothetical protein 3384721..3385017 Methylobacterium extorquens PA1 5835508 YP_001640500.1 CDS Mext_3040 NC_010172.1 3385062 3385502 R KEGG: rpd:RPD_1678 hypothetical protein; hypothetical protein complement(3385062..3385502) Methylobacterium extorquens PA1 5835509 YP_001640501.1 CDS flgI NC_010172.1 3385756 3386898 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 3385756..3386898 Methylobacterium extorquens PA1 5835510 YP_001640502.1 CDS Mext_3042 NC_010172.1 3386923 3387282 D KEGG: bja:blr5839 hypothetical protein; hypothetical protein 3386923..3387282 Methylobacterium extorquens PA1 5835511 YP_001640503.1 CDS Mext_3043 NC_010172.1 3387272 3387751 D KEGG: rpb:RPB_3796 hypothetical protein; hypothetical protein 3387272..3387751 Methylobacterium extorquens PA1 5835512 YP_001640504.1 CDS Mext_3044 NC_010172.1 3388081 3388257 D hypothetical protein 3388081..3388257 Methylobacterium extorquens PA1 5835513 YP_001640505.1 CDS flgH NC_010172.1 3388485 3389237 R part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein complement(3388485..3389237) Methylobacterium extorquens PA1 5835514 YP_001640506.1 CDS Mext_3046 NC_010172.1 3389294 3390340 R TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: nha:Nham_1382 flageller protein FlgA; flagella basal body P-ring formation protein FlgA complement(3389294..3390340) Methylobacterium extorquens PA1 5835520 YP_001640507.1 CDS Mext_3047 NC_010172.1 3390355 3391146 R TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: nha:Nham_1383 flagellar basal-body rod FlgG; flagellar basal-body rod protein FlgG complement(3390355..3391146) Methylobacterium extorquens PA1 5835521 YP_001640508.1 CDS flgF NC_010172.1 3391173 3391913 R FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar basal body rod protein FlgF complement(3391173..3391913) Methylobacterium extorquens PA1 5835522 YP_001640509.1 CDS fliL NC_010172.1 3392187 3392705 D interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 3392187..3392705 Methylobacterium extorquens PA1 5835523 YP_001640510.1 CDS fliM NC_010172.1 3392785 3394005 D with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar motor switch protein FliM 3392785..3394005 Methylobacterium extorquens PA1 5835524 YP_001640511.1 CDS Mext_3051 NC_010172.1 3394019 3394507 D KEGG: bbt:BBta_5506 hypothetical protein; hypothetical protein 3394019..3394507 Methylobacterium extorquens PA1 5835530 YP_001640512.1 CDS Mext_3052 NC_010172.1 3394504 3395301 D KEGG: rpa:RPA3895 hypothetical protein; hypothetical protein 3394504..3395301 Methylobacterium extorquens PA1 5835531 YP_001640513.1 CDS Mext_3053 NC_010172.1 3395305 3395799 R PFAM: glutathione peroxidase; KEGG: xcb:XC_2825 glutathione peroxidase-like protein; peroxiredoxin complement(3395305..3395799) Methylobacterium extorquens PA1 5835532 YP_001640514.1 CDS Mext_3054 NC_010172.1 3396187 3396819 D PFAM: Invasion associated locus B family protein; KEGG: nwi:Nwi_0706 invasion associated locus B; invasion associated locus B family protein 3396187..3396819 Methylobacterium extorquens PA1 5835533 YP_001640515.1 CDS Mext_3055 NC_010172.1 3396866 3398107 D TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: azo:azo1337 conserved hypothetical peptidoglycan-binding protein; lytic murein transglycosylase 3396866..3398107 Methylobacterium extorquens PA1 5835534 YP_001640516.1 CDS Mext_3056 NC_010172.1 3398114 3398698 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pla:Plav_0657 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) 3398114..3398698 Methylobacterium extorquens PA1 5835383 YP_001640517.1 CDS Mext_3057 NC_010172.1 3398738 3399622 R PFAM: elongation factor G domain protein; elongation factor G domain IV; KEGG: rpe:RPE_3589 translation elongation factor G; elongation factor G domain-containing protein complement(3398738..3399622) Methylobacterium extorquens PA1 5835384 YP_001640518.1 CDS Mext_3058 NC_010172.1 3399851 3400246 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: eli:ELI_07635 hypothetical protein; glutathione-dependent formaldehyde-activating protein complement(3399851..3400246) Methylobacterium extorquens PA1 5835385 YP_001640519.1 CDS Mext_3059 NC_010172.1 3400440 3401783 R PFAM: sodium:dicarboxylate symporter; KEGG: oan:Oant_3480 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter complement(3400440..3401783) Methylobacterium extorquens PA1 5835386 YP_001640520.1 CDS Mext_3060 NC_010172.1 3402095 3403972 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xau:Xaut_1775 histidine kinase; ATPase domain-containing protein 3402095..3403972 Methylobacterium extorquens PA1 5835387 YP_001640521.1 CDS Mext_3061 NC_010172.1 3403969 3405321 D PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: sme:SMb20613 C4-dicarboxylate transport transcriptional regulatory protein; sigma-54 factor interaction domain-containing protein 3403969..3405321 Methylobacterium extorquens PA1 5835425 YP_001640522.1 CDS Mext_3062 NC_010172.1 3405335 3406393 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: acr:Acry_2395 diguanylate cyclase; diguanylate cyclase complement(3405335..3406393) Methylobacterium extorquens PA1 5835426 YP_001640523.1 CDS Mext_3063 NC_010172.1 3406649 3409660 R KEGG: mlo:mll7787 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; diguanylate cyclase complement(3406649..3409660) Methylobacterium extorquens PA1 5835427 YP_001640524.1 CDS Mext_3064 NC_010172.1 3410079 3411551 R TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: mes:Meso_1720 glutamyl-tRNA(Gln) amidotransferase, B subunit; glutamyl-tRNA(Gln) amidotransferase subunit B complement(3410079..3411551) Methylobacterium extorquens PA1 5835428 YP_001640525.1 CDS Mext_3065 NC_010172.1 3411820 3412707 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bbt:BBta_3476 putative cation efflux family protein, CzcD-like protein; cation diffusion facilitator family transporter complement(3411820..3412707) Methylobacterium extorquens PA1 5835429 YP_001640526.1 CDS Mext_3066 NC_010172.1 3412781 3413044 R hypothetical protein complement(3412781..3413044) Methylobacterium extorquens PA1 5835447 YP_001640527.1 CDS Mext_3067 NC_010172.1 3413077 3413325 R hypothetical protein complement(3413077..3413325) Methylobacterium extorquens PA1 5835448 YP_001640528.1 CDS Mext_3068 NC_010172.1 3413392 3414873 R PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bam:Bamb_0893 monooxygenase, FAD-binding; FAD-binding monooxygenase complement(3413392..3414873) Methylobacterium extorquens PA1 5835449 YP_001640529.1 CDS queA NC_010172.1 3414945 3416051 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 3414945..3416051 Methylobacterium extorquens PA1 5835450 YP_001640530.1 CDS Mext_3070 NC_010172.1 3416048 3416890 D KEGG: tfu:Tfu_2432 hypothetical protein; hypothetical protein 3416048..3416890 Methylobacterium extorquens PA1 5835451 YP_001640531.1 CDS Mext_3071 NC_010172.1 3416887 3418038 D KEGG: rle:RL2407 putative queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 3416887..3418038 Methylobacterium extorquens PA1 5835457 YP_001640532.1 CDS Mext_3072 NC_010172.1 3418062 3418478 R KEGG: bra:BRADO5776 conserved hypothetical protein; putative exported protein; hypothetical protein complement(3418062..3418478) Methylobacterium extorquens PA1 5835458 YP_001640533.1 CDS Mext_3073 NC_010172.1 3418544 3419707 R KEGG: bra:BRADO5638 hypothetical protein; hypothetical protein complement(3418544..3419707) Methylobacterium extorquens PA1 5835459 YP_001640534.1 CDS Mext_3074 NC_010172.1 3420220 3420816 D KEGG: slo:Shew_2180 hypothetical protein; hypothetical protein 3420220..3420816 Methylobacterium extorquens PA1 5835461 YP_001640535.1 CDS Mext_3075 NC_010172.1 3420800 3421756 D KEGG: slo:Shew_2179 hypothetical protein; hypothetical protein 3420800..3421756 Methylobacterium extorquens PA1 5835467 YP_001640536.1 CDS Mext_3076 NC_010172.1 3422077 3422778 R KEGG: bbt:BBta_5534 hypothetical protein; hypothetical protein complement(3422077..3422778) Methylobacterium extorquens PA1 5835468 YP_001640537.1 CDS Mext_3077 NC_010172.1 3423012 3423740 D PFAM: integrase family protein; KEGG: oan:Oant_0882 phage integrase family protein; integrase family protein 3423012..3423740 Methylobacterium extorquens PA1 5835469 YP_001640538.1 CDS Mext_3078 NC_010172.1 3424419 3425018 R KEGG: pna:Pnap_3109 hypothetical protein; hypothetical protein complement(3424419..3425018) Methylobacterium extorquens PA1 5835470 YP_001640539.1 CDS Mext_3079 NC_010172.1 3425130 3426134 D hypothetical protein 3425130..3426134 Methylobacterium extorquens PA1 5835476 YP_001640540.1 CDS Mext_3080 NC_010172.1 3426460 3427881 D SMART: tyrosine protein kinase; serine/threonine protein kinase; leucine-rich repeat-containing protein typical subtype; KEGG: pst:PSPTO_3161 protein kinase, putative; serine/threonine protein kinase 3426460..3427881 Methylobacterium extorquens PA1 5835477 YP_001640541.1 CDS Mext_3081 NC_010172.1 3427981 3429519 D PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: mlo:mll9114 hypothetical protein; CHAD domain-containing protein 3427981..3429519 Methylobacterium extorquens PA1 5835478 YP_001640542.1 CDS Mext_3082 NC_010172.1 3429642 3430148 D PFAM: adenylate cyclase; KEGG: bra:BRADO2715 conserved hypothetical protein; putative CYTH domain; adenylate cyclase 3429642..3430148 Methylobacterium extorquens PA1 5835479 YP_001640543.1 CDS Mext_3083 NC_010172.1 3430236 3431963 D PFAM: ferredoxin; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: bja:blr7256 putative adenylate cyclase; adenylyl cyclase class-3/4/guanylyl cyclase 3430236..3431963 Methylobacterium extorquens PA1 5835471 YP_001640544.1 CDS Mext_3084 NC_010172.1 3431972 3432679 R PFAM: alpha/beta hydrolase fold; KEGG: gbe:GbCGDNIH1_1476 hydrolase; alpha/beta hydrolase fold protein complement(3431972..3432679) Methylobacterium extorquens PA1 5835472 YP_001640545.1 CDS Mext_3086 NC_010172.1 3433018 3434112 R KEGG: swi:Swit_5311 catalase; catalase complement(3433018..3434112) Methylobacterium extorquens PA1 5835474 YP_001640546.1 CDS Mext_3087 NC_010172.1 3434292 3434639 R hypothetical protein complement(3434292..3434639) Methylobacterium extorquens PA1 5835475 YP_001640547.1 CDS hppA NC_010172.1 3434636 3436768 R pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase complement(3434636..3436768) Methylobacterium extorquens PA1 5835554 YP_001640548.1 CDS Mext_3089 NC_010172.1 3437592 3437939 R hypothetical protein complement(3437592..3437939) Methylobacterium extorquens PA1 5835555 YP_001640549.1 CDS Mext_3090 NC_010172.1 3438155 3438370 R hypothetical protein complement(3438155..3438370) Methylobacterium extorquens PA1 5835556 YP_001640550.1 CDS Mext_3091 NC_010172.1 3438589 3439809 R PFAM: aminotransferase class I and II; KEGG: bja:blr4361 aminotransferase class I; aminotransferase complement(3438589..3439809) Methylobacterium extorquens PA1 5835557 YP_001640551.1 CDS Mext_3092 NC_010172.1 3439955 3440320 R hypothetical protein complement(3439955..3440320) Methylobacterium extorquens PA1 5835415 YP_001640552.1 CDS Mext_3093 NC_010172.1 3440448 3442265 D TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: sme:SMc00296 poly3-hydroxybutyrate polymerase protein; poly(R)-hydroxyalkanoic acid synthase 3440448..3442265 Methylobacterium extorquens PA1 5835416 YP_001640553.1 CDS Mext_3094 NC_010172.1 3442391 3444208 D PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mxa:MXAN_2260 potassium efflux system family protein; sodium/hydrogen exchanger 3442391..3444208 Methylobacterium extorquens PA1 5835417 YP_001640554.1 CDS Mext_3095 NC_010172.1 3444221 3445381 R PFAM: regulatory protein LuxR; KEGG: bbt:BBta_5209 putative regulatory protein (LuxR-family); regulatory protein LuxR complement(3444221..3445381) Methylobacterium extorquens PA1 5835418 YP_001640555.1 CDS Mext_3096 NC_010172.1 3445663 3447843 R KEGG: rpe:RPE_4409 glycine--tRNA ligase; TIGRFAM: glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta complement(3445663..3447843) Methylobacterium extorquens PA1 5835419 YP_001640556.1 CDS Mext_3097 NC_010172.1 3447999 3449885 R PFAM: protein of unknown function DUF839; KEGG: pde:Pden_3474 protein of unknown function DUF839; hypothetical protein complement(3447999..3449885) Methylobacterium extorquens PA1 5831118 YP_001640557.1 CDS Mext_3098 NC_010172.1 3450080 3450523 R KEGG: rle:RL2963 hypothetical protein; hypothetical protein complement(3450080..3450523) Methylobacterium extorquens PA1 5831119 YP_001640558.1 CDS glyQ NC_010172.1 3450527 3451465 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(3450527..3451465) Methylobacterium extorquens PA1 5831120 YP_001640559.1 CDS Mext_3100 NC_010172.1 3451561 3451719 R hypothetical protein complement(3451561..3451719) Methylobacterium extorquens PA1 5831121 YP_001640560.1 CDS Mext_3101 NC_010172.1 3451970 3452212 D hypothetical protein 3451970..3452212 Methylobacterium extorquens PA1 5833916 YP_001640561.1 CDS Mext_3102 NC_010172.1 3452225 3452788 R PFAM: regulatory protein TetR; KEGG: xau:Xaut_1146 transcriptional regulator, TetR family; regulatory protein TetR complement(3452225..3452788) Methylobacterium extorquens PA1 5833917 YP_001640562.1 CDS Mext_3103 NC_010172.1 3452792 3453256 R PFAM: protein of unknown function DUF1348; KEGG: mlo:mll3526 hypothetical protein; hypothetical protein complement(3452792..3453256) Methylobacterium extorquens PA1 5833918 YP_001640563.1 CDS Mext_3104 NC_010172.1 3453505 3454551 D PFAM: acyltransferase 3; KEGG: pat:Patl_1185 acyltransferase 3; acyltransferase 3 3453505..3454551 Methylobacterium extorquens PA1 5833919 YP_001640564.1 CDS Mext_3105 NC_010172.1 3454668 3455528 R PFAM: peptidase S49; KEGG: nwi:Nwi_2589 peptidase S49; peptidase S49 complement(3454668..3455528) Methylobacterium extorquens PA1 5833920 YP_001640565.1 CDS Mext_3106 NC_010172.1 3455755 3456507 R PFAM: methyltransferase small; Methyltransferase type 12; KEGG: nwi:Nwi_2590 methyltransferase small; methyltransferase small complement(3455755..3456507) Methylobacterium extorquens PA1 5835057 YP_001640566.1 CDS Mext_3107 NC_010172.1 3456508 3456735 R KEGG: sme:SMc00859 hypothetical/unknown protein; hypothetical protein complement(3456508..3456735) Methylobacterium extorquens PA1 5835058 YP_001640567.1 CDS Mext_3108 NC_010172.1 3456930 3457952 D PFAM: Polyprenyl synthetase; KEGG: rpd:RPD_1214 farnesyltranstransferase; polyprenyl synthetase 3456930..3457952 Methylobacterium extorquens PA1 5835059 YP_001640568.1 CDS Mext_3109 NC_010172.1 3457971 3458846 R An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(3457971..3458846) Methylobacterium extorquens PA1 5835060 YP_001640569.1 CDS Mext_3110 NC_010172.1 3458980 3460623 R PFAM: porin; KEGG: xau:Xaut_3823 porin; porin complement(3458980..3460623) Methylobacterium extorquens PA1 5835061 YP_001640570.1 CDS Mext_3111 NC_010172.1 3461564 3463459 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: nha:Nham_3217 tetratricopeptide TPR_2; hypothetical protein complement(3461564..3463459) Methylobacterium extorquens PA1 5835146 YP_001640571.1 CDS Mext_3112 NC_010172.1 3463592 3463897 R hypothetical protein complement(3463592..3463897) Methylobacterium extorquens PA1 5835147 YP_001640572.1 CDS Mext_3113 NC_010172.1 3463969 3464181 R hypothetical protein complement(3463969..3464181) Methylobacterium extorquens PA1 5835148 YP_001640573.1 CDS Mext_3114 NC_010172.1 3464588 3464827 D hypothetical protein 3464588..3464827 Methylobacterium extorquens PA1 5835149 YP_001640574.1 CDS Mext_3115 NC_010172.1 3464974 3465297 D hypothetical protein 3464974..3465297 Methylobacterium extorquens PA1 5835160 YP_001640575.1 CDS Mext_3116 NC_010172.1 3465348 3466682 R KEGG: bja:blr5116 Nrd protein; Nrd protein complement(3465348..3466682) Methylobacterium extorquens PA1 5835161 YP_001640576.1 CDS Mext_3117 NC_010172.1 3466848 3467816 D PFAM: band 7 protein; KEGG: sco:SCO5038 integral membrane protein; hypothetical protein 3466848..3467816 Methylobacterium extorquens PA1 5835162 YP_001640577.1 CDS Mext_3118 NC_010172.1 3468027 3469697 D KEGG: bxe:Bxe_B1928 ABC cyclic peptide efflux pump, fused ATPase and inner membrane subunits; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase; cyclic peptide transporter 3468027..3469697 Methylobacterium extorquens PA1 5835163 YP_001640578.1 CDS Mext_3119 NC_010172.1 3469791 3471896 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(3469791..3471896) Methylobacterium extorquens PA1 5835164 YP_001640579.1 CDS Mext_3120 NC_010172.1 3472202 3472393 D hypothetical protein 3472202..3472393 Methylobacterium extorquens PA1 5835392 YP_001640580.1 CDS Mext_3121 NC_010172.1 3472417 3473457 R PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: psb:Psyr_4766 threonine aldolase; threonine aldolase complement(3472417..3473457) Methylobacterium extorquens PA1 5835393 YP_001640581.1 CDS Mext_3122 NC_010172.1 3473599 3475365 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_2782 putative fused ATP-binding/permease protein; ABC transporter-like protein complement(3473599..3475365) Methylobacterium extorquens PA1 5835394 YP_001640582.1 CDS Mext_3123 NC_010172.1 3475571 3476926 R PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_3213 major facilitator superfamily MFS_1; major facilitator transporter complement(3475571..3476926) Methylobacterium extorquens PA1 5835395 YP_001640583.1 CDS Mext_3124 NC_010172.1 3476923 3477612 R PFAM: PRC-barrel domain protein; KEGG: rpc:RPC_3212 PRC-barrel; PRC-barrel domain-containing protein complement(3476923..3477612) Methylobacterium extorquens PA1 5834867 YP_001640584.1 CDS Mext_3125 NC_010172.1 3477922 3478296 D hypothetical protein 3477922..3478296 Methylobacterium extorquens PA1 5834868 YP_001640585.1 CDS Mext_3126 NC_010172.1 3478332 3478853 R PFAM: PRC-barrel domain protein; KEGG: rpa:RPA4758 hypothetical protein; PRC-barrel domain-containing protein complement(3478332..3478853) Methylobacterium extorquens PA1 5834869 YP_001640586.1 CDS Mext_3127 NC_010172.1 3479092 3479424 D PFAM: SWIB/MDM2 domain protein; KEGG: har:HEAR2779 hypothetical protein; SWIB/MDM2 domain-containing protein 3479092..3479424 Methylobacterium extorquens PA1 5834870 YP_001640587.1 CDS Mext_3128 NC_010172.1 3479514 3480305 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pap:PSPA7_4040 probable short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(3479514..3480305) Methylobacterium extorquens PA1 5834871 YP_001640588.1 CDS Mext_3129 NC_010172.1 3480388 3481767 R PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2121 major facilitator superfamily MFS_1; major facilitator transporter complement(3480388..3481767) Methylobacterium extorquens PA1 5834832 YP_001640589.1 CDS Mext_3130 NC_010172.1 3481996 3483027 D PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO4325 putative alpha/beta hydrolase; putative prolyl aminopeptidase; alpha/beta hydrolase fold protein 3481996..3483027 Methylobacterium extorquens PA1 5834833 YP_001640590.1 CDS Mext_3131 NC_010172.1 3483109 3483975 D PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bxe:Bxe_A0271 oxidoreductase; NAD-binding 6-phosphogluconate dehydrogenase 3483109..3483975 Methylobacterium extorquens PA1 5834834 YP_001640591.1 CDS Mext_3132 NC_010172.1 3483979 3484686 R PFAM: Glutathione S-transferase domain; KEGG: mag:amb2655 glutathione S-transferase; glutathione S-transferase domain-containing protein complement(3483979..3484686) Methylobacterium extorquens PA1 5834835 YP_001640592.1 CDS Mext_3133 NC_010172.1 3484683 3484985 R hypothetical protein complement(3484683..3484985) Methylobacterium extorquens PA1 5834836 YP_001640593.1 CDS Mext_3134 NC_010172.1 3485200 3485511 D PFAM: ETC complex I subunit conserved region; KEGG: smd:Smed_1447 ETC complex I subunit conserved region; ETC complex I subunit region 3485200..3485511 Methylobacterium extorquens PA1 5834529 YP_001640594.1 CDS Mext_3135 NC_010172.1 3485577 3486038 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rme:Rmet_3722 CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase complement(3485577..3486038) Methylobacterium extorquens PA1 5834530 YP_001640595.1 CDS Mext_3136 NC_010172.1 3486053 3487117 R KEGG: kra:Krad_0827 radical SAM domain protein; radical SAM domain-containing protein complement(3486053..3487117) Methylobacterium extorquens PA1 5835540 YP_001640596.1 CDS Mext_3137 NC_010172.1 3487177 3487980 R KEGG: xau:Xaut_3225 hypothetical protein; hypothetical protein complement(3487177..3487980) Methylobacterium extorquens PA1 5835541 YP_001640597.1 CDS Mext_3138 NC_010172.1 3488207 3490483 D KEGG: bxe:Bxe_B1322 glycogen operon protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX 3488207..3490483 Methylobacterium extorquens PA1 5835542 YP_001640598.1 CDS Mext_3139 NC_010172.1 3490656 3492257 D KEGG: bbt:BBta_0880 putative sensor histidine kinase with PAS/PAC and response regulator receiver domains; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; histidine kinase 3490656..3492257 Methylobacterium extorquens PA1 5835543 YP_001640599.1 CDS Mext_3140 NC_010172.1 3492284 3492601 D KEGG: rle:pRL110309 hypothetical protein; hypothetical protein 3492284..3492601 Methylobacterium extorquens PA1 5835544 YP_001640600.1 CDS Mext_3141 NC_010172.1 3492760 3493974 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(3492760..3493974) Methylobacterium extorquens PA1 5831438 YP_001640601.1 CDS Mext_3142 NC_010172.1 3494119 3494658 R hypothetical protein complement(3494119..3494658) Methylobacterium extorquens PA1 5831439 YP_001640602.1 CDS Mext_3143 NC_010172.1 3494814 3495362 D PFAM: Formaldehyde-activating enzyme (Fae); KEGG: gbe:GbCGDNIH1_0524 formaldehyde-activating enzyme; formaldehyde-activating protein 3494814..3495362 Methylobacterium extorquens PA1 5831440 YP_001640603.1 CDS Mext_3144 NC_010172.1 3495431 3496168 D TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: atc:AGR_C_3426 hypothetical protein; RNA methyltransferase 3495431..3496168 Methylobacterium extorquens PA1 5831441 YP_001640604.1 CDS Mext_3145 NC_010172.1 3496172 3496495 R hypothetical protein complement(3496172..3496495) Methylobacterium extorquens PA1 5832391 YP_001640605.1 CDS Mext_3146 NC_010172.1 3496542 3497555 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gbe:GbCGDNIH1_0098 alcohol dehydrogenase; alcohol dehydrogenase complement(3496542..3497555) Methylobacterium extorquens PA1 5832392 YP_001640606.1 CDS Mext_3147 NC_010172.1 3497688 3499373 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bbt:BBta_0969 putative methyl-accepting chemotaxis protein; chemotaxis sensory transducer protein complement(3497688..3499373) Methylobacterium extorquens PA1 5832393 YP_001640607.1 CDS Mext_3148 NC_010172.1 3499870 3500418 R KEGG: sit:TM1040_3505 hypothetical protein; hypothetical protein complement(3499870..3500418) Methylobacterium extorquens PA1 5832394 YP_001640608.1 CDS Mext_3149 NC_010172.1 3500426 3501733 R KEGG: mlo:mlr8465 O-acetylhomoserine (thiol)-lyase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase complement(3500426..3501733) Methylobacterium extorquens PA1 5832395 YP_001640609.1 CDS Mext_3150 NC_010172.1 3501877 3502263 R PFAM: response regulator receiver; KEGG: rpd:RPD_3796 response regulator receiver; response regulator receiver complement(3501877..3502263) Methylobacterium extorquens PA1 5833606 YP_001640610.1 CDS Mext_3151 NC_010172.1 3502377 3503774 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: oan:Oant_3012 protein of unknown function DUF224 cysteine-rich region domain protein; hypothetical protein complement(3502377..3503774) Methylobacterium extorquens PA1 5833607 YP_001640611.1 CDS Mext_3152 NC_010172.1 3503930 3504298 R KEGG: bja:bll1143 hypothetical protein; hypothetical protein complement(3503930..3504298) Methylobacterium extorquens PA1 5833608 YP_001640612.1 CDS Mext_3153 NC_010172.1 3504506 3505456 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: pla:Plav_0472 alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase domain-containing protein 3504506..3505456 Methylobacterium extorquens PA1 5833609 YP_001640613.1 CDS Mext_3154 NC_010172.1 3505496 3508006 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: rle:RL0582 putative ATP-dependent helicase; DEAD/DEAH box helicase 3505496..3508006 Methylobacterium extorquens PA1 5833610 YP_001640614.1 CDS Mext_3155 NC_010172.1 3508048 3508761 D KEGG: bja:blr1149 putative ICC-like phosphoesterases; putative ICC-like phosphoesterase 3508048..3508761 Methylobacterium extorquens PA1 5831090 YP_001640615.1 CDS Mext_3156 NC_010172.1 3508874 3509311 R KEGG: jan:Jann_0504 hypothetical protein; hypothetical protein complement(3508874..3509311) Methylobacterium extorquens PA1 5831091 YP_001640616.1 CDS Mext_3157 NC_010172.1 3509613 3510938 D PFAM: Chloride channel core; KEGG: bbt:BBta_5041 putative H(+)/Cl(-) exchange transporter; chloride channel core 3509613..3510938 Methylobacterium extorquens PA1 5831092 YP_001640617.1 CDS Mext_3158 NC_010172.1 3511012 3511191 D PFAM: protein of unknown function DUF1328; KEGG: bra:BRADO2787 conserved hypothetical protein; putative signal peptide; hypothetical protein 3511012..3511191 Methylobacterium extorquens PA1 5831093 YP_001640618.1 CDS Mext_3159 NC_010172.1 3511207 3512052 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mxa:MXAN_0865 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 3511207..3512052 Methylobacterium extorquens PA1 5832535 YP_001640619.1 CDS Mext_3160 NC_010172.1 3512222 3513199 R KEGG: bja:bll5027 putative thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; thiamine-monophosphate kinase complement(3512222..3513199) Methylobacterium extorquens PA1 5832536 YP_001640620.1 CDS Mext_3161 NC_010172.1 3513205 3513720 R TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: bja:bll5028 N-utilization substance protein B; transcription antitermination factor NusB complement(3513205..3513720) Methylobacterium extorquens PA1 5832537 YP_001640621.1 CDS Mext_3162 NC_010172.1 3513717 3514238 R KEGG: rpb:RPB_2638 riboflavin synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase complement(3513717..3514238) Methylobacterium extorquens PA1 5832538 YP_001640622.1 CDS Mext_3163 NC_010172.1 3514551 3516077 D PFAM: UbiA prenyltransferase; KEGG: hne:HNE_2070 prenyltransferase, UbiA family; hypothetical protein 3514551..3516077 Methylobacterium extorquens PA1 5832539 YP_001640623.1 CDS Mext_3164 NC_010172.1 3516077 3516502 D PFAM: GtrA family protein; KEGG: hne:HNE_2071 hypothetical protein; GtrA family protein 3516077..3516502 Methylobacterium extorquens PA1 5830998 YP_001640624.1 CDS Mext_3165 NC_010172.1 3516490 3517710 R KEGG: mxa:MXAN_1439 hypothetical protein; hypothetical protein complement(3516490..3517710) Methylobacterium extorquens PA1 5830999 YP_001640625.1 CDS Mext_3166 NC_010172.1 3518004 3518492 D hypothetical protein 3518004..3518492 Methylobacterium extorquens PA1 5831000 YP_001640626.1 CDS Mext_3167 NC_010172.1 3518538 3519176 R TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: oan:Oant_2527 riboflavin synthase, alpha subunit; riboflavin synthase subunit alpha complement(3518538..3519176) Methylobacterium extorquens PA1 5831001 YP_001640627.1 CDS Mext_3168 NC_010172.1 3519178 3520293 R TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: bja:bll5031 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase; riboflavin biosynthesis protein RibD complement(3519178..3520293) Methylobacterium extorquens PA1 5831113 YP_001640628.1 CDS nrdR NC_010172.1 3520305 3520862 R PFAM: ATP-cone domain protein; KEGG: xau:Xaut_4277 ATP-cone domain protein; transcriptional regulator NrdR complement(3520305..3520862) Methylobacterium extorquens PA1 5831114 YP_001640629.1 CDS glyA NC_010172.1 3521633 3522937 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(3521633..3522937) Methylobacterium extorquens PA1 5831116 YP_001640630.1 CDS Mext_3172 NC_010172.1 3523303 3523791 R PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: rpd:RPD_0827 H+-transporting two-sector ATPase, B/B' subunit; H+transporting two-sector ATPase subunit B/B' complement(3523303..3523791) Methylobacterium extorquens PA1 5831117 YP_001640631.1 CDS Mext_3173 NC_010172.1 3523879 3524484 R PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: rpa:RPA0844 putative FoF1 ATP synthase, subunit B'; H+transporting two-sector ATPase subunit B/B' complement(3523879..3524484) Methylobacterium extorquens PA1 5833145 YP_001640632.1 CDS Mext_3174 NC_010172.1 3524682 3524909 R PFAM: H+transporting two-sector ATPase C subunit; KEGG: oan:Oant_0501 H+transporting two-sector ATPase C subunit; H+transporting two-sector ATPase subunit C complement(3524682..3524909) Methylobacterium extorquens PA1 5833146 YP_001640633.1 CDS Mext_3175 NC_010172.1 3524970 3525725 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(3524970..3525725) Methylobacterium extorquens PA1 5833147 YP_001640634.1 CDS Mext_3176 NC_010172.1 3525846 3526214 R KEGG: smd:Smed_0446 putative FOF1 ATP synthase, subunit I transmembrane protein; hypothetical protein complement(3525846..3526214) Methylobacterium extorquens PA1 5833148 YP_001640635.1 CDS Mext_3177 NC_010172.1 3526378 3527031 R KEGG: mes:Meso_0767 DsbA oxidoreductase; DsbA oxidoreductase complement(3526378..3527031) Methylobacterium extorquens PA1 5832937 YP_001640636.1 CDS Mext_3178 NC_010172.1 3527305 3527781 R PFAM: protein of unknown function DUF1159; KEGG: rpb:RPB_1069 protein of unknown function DUF1159; hypothetical protein complement(3527305..3527781) Methylobacterium extorquens PA1 5832938 YP_001640637.1 CDS Mext_3179 NC_010172.1 3527914 3528237 R hypothetical protein complement(3527914..3528237) Methylobacterium extorquens PA1 5832939 YP_001640638.1 CDS Mext_3180 NC_010172.1 3528273 3529598 D TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: rpa:RPA4485 adenine glycosylase mutY; A/G-specific adenine glycosylase 3528273..3529598 Methylobacterium extorquens PA1 5832940 YP_001640639.1 CDS Mext_3181 NC_010172.1 3529662 3530858 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mes:Meso_0763 DNA methylase N-4/N-6; DNA methylase N-4/N-6 domain-containing protein complement(3529662..3530858) Methylobacterium extorquens PA1 5832941 YP_001640640.1 CDS Mext_3182 NC_010172.1 3531288 3531635 D TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: syn:slr0423 rare lipoprotein A; rare lipoprotein A 3531288..3531635 Methylobacterium extorquens PA1 5833026 YP_001640641.1 CDS Mext_3183 NC_010172.1 3531763 3532080 D KEGG: nwi:Nwi_0402 hypothetical protein; hypothetical protein 3531763..3532080 Methylobacterium extorquens PA1 5833027 YP_001640642.1 CDS Mext_3184 NC_010172.1 3532188 3532409 D KEGG: osa:4344410 Os08g0100500; hypothetical protein 3532188..3532409 Methylobacterium extorquens PA1 5833028 YP_001640643.1 CDS Mext_3185 NC_010172.1 3532583 3534406 D PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_2599 ABC transporter related; ABC transporter-like protein 3532583..3534406 Methylobacterium extorquens PA1 5833029 YP_001640644.1 CDS Mext_3186 NC_010172.1 3534733 3536394 D PFAM: porin; KEGG: xau:Xaut_3823 porin; porin 3534733..3536394 Methylobacterium extorquens PA1 5833021 YP_001640645.1 CDS Mext_3187 NC_010172.1 3536609 3538618 D KEGG: xau:Xaut_3825 OmpA/MotB domain protein; hypothetical protein 3536609..3538618 Methylobacterium extorquens PA1 5833022 YP_001640646.1 CDS Mext_3188 NC_010172.1 3538661 3539896 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ret:RHE_CH02493 probable adenylate cyclase protein; adenylyl cyclase class-3/4/guanylyl cyclase complement(3538661..3539896) Methylobacterium extorquens PA1 5833023 YP_001640647.1 CDS Mext_3189 NC_010172.1 3540037 3540642 D PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: rme:Rmet_3828 hydrolases of HD superfamily-like protein; metal-dependent phosphohydrolase 3540037..3540642 Methylobacterium extorquens PA1 5833024 YP_001640648.1 CDS Mext_3190 NC_010172.1 3540666 3542990 R PFAM: Lytic transglycosylase catalytic; KEGG: rpe:RPE_2633 lytic transglycosylase, catalytic; lytic transglycosylase complement(3540666..3542990) Methylobacterium extorquens PA1 5833025 YP_001640649.1 CDS Mext_3191 NC_010172.1 3543190 3544080 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 3543190..3544080 Methylobacterium extorquens PA1 5831517 YP_001640650.1 CDS smpB NC_010172.1 3544183 3544656 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 3544183..3544656 Methylobacterium extorquens PA1 5831518 YP_001640651.1 CDS Mext_3193 NC_010172.1 3544879 3545535 R PFAM: protein of unknown function DUF88; KEGG: bja:blr5067 hypothetical protein; hypothetical protein complement(3544879..3545535) Methylobacterium extorquens PA1 5831519 YP_001640652.1 CDS Mext_3194 NC_010172.1 3546035 3546625 R TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: ccr:CC_1555 orotate phosphoribosyltransferase; orotate phosphoribosyltransferase complement(3546035..3546625) Methylobacterium extorquens PA1 5831520 YP_001640653.1 CDS Mext_3195 NC_010172.1 3546842 3547189 R hypothetical protein complement(3546842..3547189) Methylobacterium extorquens PA1 5832916 YP_001640654.1 CDS Mext_3196 NC_010172.1 3547304 3549535 R KEGG: bja:bll5065 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; RelA/SpoT family protein complement(3547304..3549535) Methylobacterium extorquens PA1 5832917 YP_001640655.1 CDS Mext_3197 NC_010172.1 3549907 3550317 R Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(3549907..3550317) Methylobacterium extorquens PA1 5832918 YP_001640656.1 CDS Mext_3198 NC_010172.1 3550521 3551087 D PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: bbt:BBta_0040 putative NifU protein; scaffold protein Nfu/NifU 3550521..3551087 Methylobacterium extorquens PA1 5832919 YP_001640657.1 CDS Mext_3199 NC_010172.1 3551245 3551925 D PFAM: peptidase M22 glycoprotease; KEGG: xau:Xaut_1822 peptidase M22 glycoprotease; peptidase M22 glycoprotease 3551245..3551925 Methylobacterium extorquens PA1 5832920 YP_001640658.1 CDS Mext_3200 NC_010172.1 3551991 3552443 D PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_0043 putative ribosomal-protein-alanine acetyltransferase, RimI-like protein; N-acetyltransferase GCN5 3551991..3552443 Methylobacterium extorquens PA1 5831681 YP_001640659.1 CDS Mext_3201 NC_010172.1 3552469 3553347 D PFAM: phospholipid/glycerol acyltransferase; KEGG: rpd:RPD_3930 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 3552469..3553347 Methylobacterium extorquens PA1 5831682 YP_001640660.1 CDS Mext_3202 NC_010172.1 3553352 3553795 R PFAM: MEKHLA domain protein; KEGG: xac:XAC1124 hypothetical protein; MEKHLA domain-containing protein complement(3553352..3553795) Methylobacterium extorquens PA1 5831683 YP_001640661.1 CDS Mext_3203 NC_010172.1 3553894 3554340 D hypothetical protein 3553894..3554340 Methylobacterium extorquens PA1 5831684 YP_001640662.1 CDS Mext_3204 NC_010172.1 3554572 3555912 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 3554572..3555912 Methylobacterium extorquens PA1 5831496 YP_001640663.1 CDS Mext_3205 NC_010172.1 3555949 3557055 D PFAM: PhoH family protein; KEGG: bra:BRADO0042 putative phosphate starvation-inducible protein, PhoH-like protein; PhoH family protein 3555949..3557055 Methylobacterium extorquens PA1 5831497 YP_001640664.1 CDS Mext_3206 NC_010172.1 3557125 3557610 D PFAM: protein of unknown function UPF0054; KEGG: rpe:RPE_0204 protein of unknown function UPF0054; hypothetical protein 3557125..3557610 Methylobacterium extorquens PA1 5831498 YP_001640665.1 CDS Mext_3207 NC_010172.1 3557647 3558795 D PFAM: CBS domain containing protein; transporter-associated region; KEGG: mlo:mlr5537 hemolysin; hypothetical protein 3557647..3558795 Methylobacterium extorquens PA1 5831499 YP_001640666.1 CDS lnt NC_010172.1 3558824 3560527 D Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 3558824..3560527 Methylobacterium extorquens PA1 5831500 YP_001640667.1 CDS Mext_3209 NC_010172.1 3560710 3561480 D KEGG: rno:304859 DEAH (Asp-Glu-Ala-His) box polypeptide 9 (predicted); hypothetical protein 3560710..3561480 Methylobacterium extorquens PA1 5834920 YP_001640668.1 CDS Mext_3210 NC_010172.1 3561607 3563199 R PFAM: Catalase domain protein; KEGG: dge:Dgeo_2728 catalase; catalase complement(3561607..3563199) Methylobacterium extorquens PA1 5834921 YP_001640669.1 CDS Mext_3211 NC_010172.1 3563347 3564318 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: acr:Acry_0653 transcriptional regulator, LysR family; LysR substrate-binding protein 3563347..3564318 Methylobacterium extorquens PA1 5834922 YP_001640670.1 CDS Mext_3212 NC_010172.1 3564472 3565527 D TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: spe:Spro_0189 putative ammonia monooxygenase; membrane protein AbrB 3564472..3565527 Methylobacterium extorquens PA1 5834923 YP_001640671.1 CDS Mext_3213 NC_010172.1 3565524 3565868 D PFAM: diacylglycerol kinase; KEGG: nha:Nham_1484 diacylglycerol kinase; diacylglycerol kinase 3565524..3565868 Methylobacterium extorquens PA1 5834322 YP_001640672.1 CDS Mext_3214 NC_010172.1 3565891 3566088 R hypothetical protein complement(3565891..3566088) Methylobacterium extorquens PA1 5834323 YP_001640673.1 CDS Mext_3215 NC_010172.1 3566085 3566285 R hypothetical protein complement(3566085..3566285) Methylobacterium extorquens PA1 5834324 YP_001640674.1 CDS Mext_3216 NC_010172.1 3566560 3567117 D PFAM: metallophosphoesterase; KEGG: sme:SMb20398 hypothetical protein; metallophosphoesterase 3566560..3567117 Methylobacterium extorquens PA1 5834325 YP_001640675.1 CDS Mext_3217 NC_010172.1 3567127 3568002 R KEGG: bbt:BBta_5384 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase complement(3567127..3568002) Methylobacterium extorquens PA1 5834326 YP_001640676.1 CDS Mext_3218 NC_010172.1 3568213 3569475 D PFAM: protein of unknown function DUF323; KEGG: rpc:RPC_1598 protein of unknown function DUF323; hypothetical protein 3568213..3569475 Methylobacterium extorquens PA1 5835550 YP_001640677.1 CDS Mext_3219 NC_010172.1 3569533 3570510 D KEGG: rpb:RPB_3706 hypothetical protein; hypothetical protein 3569533..3570510 Methylobacterium extorquens PA1 5835551 YP_001640678.1 CDS Mext_3220 NC_010172.1 3570785 3572926 D KEGG: psb:Psyr_3983 serralysin; hypothetical protein 3570785..3572926 Methylobacterium extorquens PA1 5835552 YP_001640679.1 CDS Mext_3221 NC_010172.1 3572976 3573416 R PFAM: protein of unknown function DUF779; KEGG: aeh:Mlg_2727 protein of unknown function DUF779; hypothetical protein complement(3572976..3573416) Methylobacterium extorquens PA1 5835553 YP_001640680.1 CDS Mext_3222 NC_010172.1 3573639 3576326 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bja:blr2809 nitrate reductase large subunit; nitrate reductase 3573639..3576326 Methylobacterium extorquens PA1 5835535 YP_001640681.1 CDS Mext_3223 NC_010172.1 3576442 3577899 D TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: xau:Xaut_2375 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 3576442..3577899 Methylobacterium extorquens PA1 5835536 YP_001640682.1 CDS Mext_3224 NC_010172.1 3578107 3578787 D PFAM: electron transport protein SCO1/SenC; KEGG: xau:Xaut_2379 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 3578107..3578787 Methylobacterium extorquens PA1 5835537 YP_001640683.1 CDS Mext_3225 NC_010172.1 3578738 3580528 R KEGG: xau:Xaut_2382 glycosyl transferase family 2; glycosyl transferase family protein complement(3578738..3580528) Methylobacterium extorquens PA1 5835538 YP_001640684.1 CDS Mext_3226 NC_010172.1 3580704 3581627 D PFAM: extracellular solute-binding protein family 3; KEGG: nha:Nham_0202 extracellular solute-binding protein, family 3; extracellular solute-binding protein 3580704..3581627 Methylobacterium extorquens PA1 5835539 YP_001640685.1 CDS Mext_3227 NC_010172.1 3581723 3581929 D hypothetical protein 3581723..3581929 Methylobacterium extorquens PA1 5835490 YP_001640686.1 CDS Mext_3228 NC_010172.1 3581953 3582363 R KEGG: bbt:BBta_5025 hypothetical protein; hypothetical protein complement(3581953..3582363) Methylobacterium extorquens PA1 5835491 YP_001640687.1 CDS Mext_3229 NC_010172.1 3582457 3584364 R KEGG: rpd:RPD_0286 cobalt chelatase, pCobT subunit; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit; SMART: von Willebrand factor type A; cobalt chelatase large subunit complement(3582457..3584364) Methylobacterium extorquens PA1 5835492 YP_001640688.1 CDS Mext_3230 NC_010172.1 3584485 3585468 R KEGG: nha:Nham_0498 cobalt chelatase, pCobS small subunit; TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities AAA_5; cobalt chelatase small subunit complement(3584485..3585468) Methylobacterium extorquens PA1 5835493 YP_001640689.1 CDS Mext_3231 NC_010172.1 3585808 3586515 R PFAM: heat shock protein DnaJ domain protein; KEGG: rpc:RPC_0536 heat shock protein DnaJ-like; heat shock protein DnaJ domain-containing protein complement(3585808..3586515) Methylobacterium extorquens PA1 5835494 YP_001640690.1 CDS Mext_3232 NC_010172.1 3586602 3586961 D PFAM: BolA family protein; KEGG: nha:Nham_0495 BolA-like protein; BolA family protein 3586602..3586961 Methylobacterium extorquens PA1 5835430 YP_001640691.1 CDS Mext_3233 NC_010172.1 3586993 3587415 D PFAM: Class I peptide chain release factor; KEGG: nha:Nham_3167 class I peptide chain release factor; class I peptide chain release factor 3586993..3587415 Methylobacterium extorquens PA1 5835431 YP_001640692.1 CDS Mext_3234 NC_010172.1 3587429 3588187 R PFAM: protein of unknown function DUF1275; KEGG: pau:PA14_03150 hypothetical protein; hypothetical protein complement(3587429..3588187) Methylobacterium extorquens PA1 5835432 YP_001640693.1 CDS Mext_3235 NC_010172.1 3588223 3589218 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rpa:RPA0804 hypothetical protein; type 12 methyltransferase complement(3588223..3589218) Methylobacterium extorquens PA1 5835433 YP_001640694.1 CDS Mext_3236 NC_010172.1 3589264 3590322 D KEGG: rpa:RPA0803 putative mRNA 3-end processing factor; putative mRNA 3-end processing factor 3589264..3590322 Methylobacterium extorquens PA1 5835434 YP_001640695.1 CDS Mext_3237 NC_010172.1 3590319 3592160 D PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: bja:bll1144 putative ATP dependent DNA ligase; ATP dependent DNA ligase 3590319..3592160 Methylobacterium extorquens PA1 5835410 YP_001640696.1 CDS Mext_3238 NC_010172.1 3592157 3592639 D PFAM: protein of unknown function UPF0047; KEGG: xau:Xaut_1451 protein of unknown function UPF0047; hypothetical protein 3592157..3592639 Methylobacterium extorquens PA1 5835411 YP_001640697.1 CDS Mext_3239 NC_010172.1 3592648 3593094 R PFAM: protein of unknown function DUF606; KEGG: bur:Bcep18194_B0608 protein of unknown function DUF606; hypothetical protein complement(3592648..3593094) Methylobacterium extorquens PA1 5835412 YP_001640698.1 CDS Mext_3240 NC_010172.1 3593217 3593381 R PFAM: protein of unknown function UPF0057; KEGG: aha:AHA_1233 hypothetical protein; hypothetical protein complement(3593217..3593381) Methylobacterium extorquens PA1 5835413 YP_001640699.1 CDS Mext_3241 NC_010172.1 3593484 3595685 R PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rpe:RPE_0674 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein; 3-hydroxyacyl-CoA dehydrogenase complement(3593484..3595685) Methylobacterium extorquens PA1 5835414 YP_001640700.1 CDS Mext_3242 NC_010172.1 3595753 3596604 D PFAM: EAL domain protein; KEGG: bra:BRADO6920 conserved hypothetical protein, EAL domain protein; EAL domain-containing protein 3595753..3596604 Methylobacterium extorquens PA1 5835515 YP_001640701.1 CDS Mext_3243 NC_010172.1 3596680 3597177 R hypothetical protein complement(3596680..3597177) Methylobacterium extorquens PA1 5835516 YP_001640702.1 CDS Mext_3244 NC_010172.1 3597305 3598513 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(3597305..3598513) Methylobacterium extorquens PA1 5835517 YP_001640703.1 CDS Mext_3245 NC_010172.1 3598700 3600490 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr1158 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(3598700..3600490) Methylobacterium extorquens PA1 5835518 YP_001640704.1 CDS Mext_3246 NC_010172.1 3600696 3604133 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: rpa:RPA0814 hypothetical protein; Sel1 domain-containing protein 3600696..3604133 Methylobacterium extorquens PA1 5835519 YP_001640705.1 CDS Mext_3247 NC_010172.1 3604584 3604910 D hypothetical protein 3604584..3604910 Methylobacterium extorquens PA1 5835442 YP_001640706.1 CDS Mext_3248 NC_010172.1 3604968 3605912 R KEGG: pat:Patl_3215 hypothetical protein; hypothetical protein complement(3604968..3605912) Methylobacterium extorquens PA1 5835443 YP_001640707.1 CDS Mext_3249 NC_010172.1 3606050 3606568 D KEGG: kra:Krad_3574 hypothetical protein; hypothetical protein 3606050..3606568 Methylobacterium extorquens PA1 5835444 YP_001640708.1 CDS Mext_3250 NC_010172.1 3606565 3607368 D PFAM: phosphoesterase PA-phosphatase related; KEGG: xau:Xaut_2555 phosphoesterase PA-phosphatase related; PA-phosphatase-like phosphoesterase 3606565..3607368 Methylobacterium extorquens PA1 5835445 YP_001640709.1 CDS Mext_3251 NC_010172.1 3607424 3608731 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: chu:CHU_1247 probable dehydrogenase; oxidoreductase domain-containing protein 3607424..3608731 Methylobacterium extorquens PA1 5835446 YP_001640710.1 CDS Mext_3252 NC_010172.1 3608843 3608989 R hypothetical protein complement(3608843..3608989) Methylobacterium extorquens PA1 5835354 YP_001640711.1 CDS Mext_3253 NC_010172.1 3609070 3610365 R PFAM: peptidase M16 domain protein; KEGG: xau:Xaut_3525 peptidase M16 domain protein; processing peptidase complement(3609070..3610365) Methylobacterium extorquens PA1 5835355 YP_001640712.1 CDS Mext_3254 NC_010172.1 3610587 3611999 R KEGG: xau:Xaut_3524 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; threonine synthase complement(3610587..3611999) Methylobacterium extorquens PA1 5835356 YP_001640713.1 CDS Mext_3255 NC_010172.1 3612085 3612498 R KEGG: bja:bll2215 hypothetical protein; hypothetical protein complement(3612085..3612498) Methylobacterium extorquens PA1 5835357 YP_001640714.1 CDS Mext_3256 NC_010172.1 3612595 3613365 R PFAM: Surfeit locus 1 family protein; KEGG: xau:Xaut_4641 surfeit locus 1 family protein; surfeit locus 1 family protein complement(3612595..3613365) Methylobacterium extorquens PA1 5835358 YP_001640715.1 CDS Mext_3257 NC_010172.1 3613365 3613739 R PFAM: protein of unknown function DUF983; KEGG: mlo:mlr7498 hypothetical protein; hypothetical protein complement(3613365..3613739) Methylobacterium extorquens PA1 5835405 YP_001640716.1 CDS Mext_3258 NC_010172.1 3613866 3614723 R PFAM: cytochrome c oxidase subunit III; KEGG: bbt:BBta_0833 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III complement(3613866..3614723) Methylobacterium extorquens PA1 5835406 YP_001640717.1 CDS Mext_3259 NC_010172.1 3614870 3615478 R PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: bja:blr1174 putative cytochrome C oxidase assembly protein; cytochrome c oxidase assembly protein CtaG/Cox11 complement(3614870..3615478) Methylobacterium extorquens PA1 5835407 YP_001640718.1 CDS Mext_3260 NC_010172.1 3615491 3615655 R KEGG: bbt:BBta_0831 conserved protein CoxF; protein CoxF complement(3615491..3615655) Methylobacterium extorquens PA1 5835408 YP_001640719.1 CDS Mext_3261 NC_010172.1 3615664 3616617 R converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase complement(3615664..3616617) Methylobacterium extorquens PA1 5835409 YP_001640720.1 CDS Mext_3262 NC_010172.1 3616783 3618411 R KEGG: xau:Xaut_4647 cytochrome c oxidase subunit I type; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I complement(3616783..3618411) Methylobacterium extorquens PA1 5835401 YP_001640721.1 CDS Mext_3263 NC_010172.1 3618489 3619328 R KEGG: xau:Xaut_4648 cytochrome c oxidase subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome c oxidase subunit II complement(3618489..3619328) Methylobacterium extorquens PA1 5835402 YP_001640722.1 CDS Mext_3264 NC_010172.1 3619584 3620459 D TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: rpc:RPC_4562 formate dehydrogenase family accessory protein FdhD; formate dehydrogenase family accessory protein FdhD 3619584..3620459 Methylobacterium extorquens PA1 5835403 YP_001640723.1 CDS Mext_3265 NC_010172.1 3620486 3621526 R KEGG: bbt:BBta_1372 putative exported protein of unknown function; hypothetical protein complement(3620486..3621526) Methylobacterium extorquens PA1 5835404 YP_001640724.1 CDS Mext_3266 NC_010172.1 3622149 3626867 D PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin); glutamate synthase 3622149..3626867 Methylobacterium extorquens PA1 5835495 YP_001640725.1 CDS gltD NC_010172.1 3626991 3628424 D glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 3626991..3628424 Methylobacterium extorquens PA1 5835496 YP_001640726.1 CDS Mext_3268 NC_010172.1 3628503 3629459 R PFAM: beta-lactamase domain protein; KEGG: sil:SPO2170 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein complement(3628503..3629459) Methylobacterium extorquens PA1 5835497 YP_001640727.1 CDS Mext_3269 NC_010172.1 3629629 3630969 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: bja:blr5687 two-component sensor histidine kinase; ATPase domain-containing protein 3629629..3630969 Methylobacterium extorquens PA1 5835498 YP_001640728.1 CDS Mext_3270 NC_010172.1 3630975 3631637 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bja:blr5688 two-component response regulator; response regulator receiver 3630975..3631637 Methylobacterium extorquens PA1 5835499 YP_001640729.1 CDS Mext_3271 NC_010172.1 3631665 3633122 R PFAM: protein of unknown function DUF459; KEGG: xau:Xaut_1975 protein of unknown function DUF459; hypothetical protein complement(3631665..3633122) Methylobacterium extorquens PA1 5833851 YP_001640730.1 CDS Mext_3272 NC_010172.1 3633393 3634574 R TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsq:Rsph17025_0051 lytic murein transglycosylase; lytic murein transglycosylase complement(3633393..3634574) Methylobacterium extorquens PA1 5833852 YP_001640731.1 CDS Mext_3273 NC_010172.1 3634571 3635563 R TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mes:Meso_0777 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(3634571..3635563) Methylobacterium extorquens PA1 5833853 YP_001640732.1 CDS Mext_3274 NC_010172.1 3635736 3636602 D TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: atc:AGR_L_2114 UTP--glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 3635736..3636602 Methylobacterium extorquens PA1 5833854 YP_001640733.1 CDS Mext_3275 NC_010172.1 3636844 3637740 R PFAM: N-formylglutamate amidohydrolase; KEGG: nha:Nham_1142 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase complement(3636844..3637740) Methylobacterium extorquens PA1 5833855 YP_001640734.1 CDS Mext_3276 NC_010172.1 3638047 3638403 D PFAM: response regulator receiver; KEGG: smd:Smed_2719 response regulator receiver protein; response regulator receiver 3638047..3638403 Methylobacterium extorquens PA1 5834765 YP_001640735.1 CDS Mext_3277 NC_010172.1 3638526 3638783 D TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: xau:Xaut_3089 glutaredoxin 3; glutaredoxin 3 3638526..3638783 Methylobacterium extorquens PA1 5834766 YP_001640736.1 CDS Mext_3278 NC_010172.1 3638780 3639625 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: xau:Xaut_3088 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3638780..3639625 Methylobacterium extorquens PA1 5834767 YP_001640737.1 CDS Mext_3279 NC_010172.1 3639746 3640222 D PFAM: protein of unknown function DUF1178; KEGG: rpa:RPA0600 hypothetical protein; hypothetical protein 3639746..3640222 Methylobacterium extorquens PA1 5834768 YP_001640738.1 CDS Mext_3280 NC_010172.1 3640241 3641305 R KEGG: ccr:CC_0285 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein complement(3640241..3641305) Methylobacterium extorquens PA1 5835338 YP_001640739.1 CDS Mext_3281 NC_010172.1 3641480 3642139 D TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: rpe:RPE_4918 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase 3641480..3642139 Methylobacterium extorquens PA1 5835339 YP_001640740.1 CDS Mext_3282 NC_010172.1 3642244 3642747 D PFAM: conserved hypothetical protein; KEGG: rpa:RPA0231 hypothetical protein; hypothetical protein 3642244..3642747 Methylobacterium extorquens PA1 5835340 YP_001640741.1 CDS Mext_3283 NC_010172.1 3642834 3643292 R KEGG: sme:SMc00823 hypothetical protein; hypothetical protein complement(3642834..3643292) Methylobacterium extorquens PA1 5835341 YP_001640742.1 CDS mepA NC_010172.1 3643324 3644253 R D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase complement(3643324..3644253) Methylobacterium extorquens PA1 5835342 YP_001640743.1 CDS Mext_3285 NC_010172.1 3644380 3644775 D PFAM: PRC-barrel domain protein; KEGG: atc:AGR_C_723 hypothetical protein; PRC-barrel domain-containing protein 3644380..3644775 Methylobacterium extorquens PA1 5835317 YP_001640744.1 CDS Mext_3286 NC_010172.1 3644806 3645153 R KEGG: rpe:RPE_4919 hypothetical protein; hypothetical protein complement(3644806..3645153) Methylobacterium extorquens PA1 5835318 YP_001640745.1 CDS Mext_3287 NC_010172.1 3645239 3646480 R PFAM: Na+/H+ antiporter NhaA; KEGG: bov:BOV_0406 Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA complement(3645239..3646480) Methylobacterium extorquens PA1 5835319 YP_001640746.1 CDS Mext_3288 NC_010172.1 3646552 3647193 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rpc:RPC_4876 thioredoxin-like; redoxin domain-containing protein complement(3646552..3647193) Methylobacterium extorquens PA1 5835320 YP_001640747.1 CDS Mext_3289 NC_010172.1 3647233 3648624 D TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: xau:Xaut_1738 argininosuccinate lyase; argininosuccinate lyase 3647233..3648624 Methylobacterium extorquens PA1 5835321 YP_001640748.1 CDS Mext_3290 NC_010172.1 3648721 3649032 D hypothetical protein 3648721..3649032 Methylobacterium extorquens PA1 5835322 YP_001640749.1 CDS Mext_3291 NC_010172.1 3649188 3649871 D KEGG: xau:Xaut_0405 hypothetical protein; hypothetical protein 3649188..3649871 Methylobacterium extorquens PA1 5835323 YP_001640750.1 CDS Mext_3292 NC_010172.1 3650031 3650294 R KEGG: nha:Nham_1089 hypothetical protein; hypothetical protein complement(3650031..3650294) Methylobacterium extorquens PA1 5835324 YP_001640751.1 CDS Mext_3293 NC_010172.1 3650736 3651473 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsh:Rsph17029_1725 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase complement(3650736..3651473) Methylobacterium extorquens PA1 5835325 YP_001640752.1 CDS Mext_3294 NC_010172.1 3651695 3653464 D PFAM: Carbamoyltransferase; KEGG: mca:MCA1640 nodulation protein nolNO, putative; carbamoyltransferase 3651695..3653464 Methylobacterium extorquens PA1 5835326 YP_001640753.1 CDS Mext_3295 NC_010172.1 3653507 3653851 R KEGG: nwi:Nwi_2478 hypothetical protein; hypothetical protein complement(3653507..3653851) Methylobacterium extorquens PA1 5835388 YP_001640754.1 CDS Mext_3296 NC_010172.1 3653948 3654622 R KEGG: mlo:mll7634 2-haloacid halidohydrolase Iva; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase complement(3653948..3654622) Methylobacterium extorquens PA1 5835389 YP_001640755.1 CDS Mext_3297 NC_010172.1 3654660 3656189 R TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: nha:Nham_1306 integral membrane protein MviN; integral membrane protein MviN complement(3654660..3656189) Methylobacterium extorquens PA1 5835390 YP_001640756.1 CDS Mext_3298 NC_010172.1 3656424 3657023 R PFAM: manganese and iron superoxide dismutase; KEGG: rpe:RPE_3840 superoxide dismutase; superoxide dismutase complement(3656424..3657023) Methylobacterium extorquens PA1 5835391 YP_001640757.1 CDS Mext_3299 NC_010172.1 3657393 3658385 D KEGG: rpc:RPC_1773 hypothetical protein; hypothetical protein 3657393..3658385 Methylobacterium extorquens PA1 5831442 YP_001640758.1 CDS Mext_3300 NC_010172.1 3658455 3660206 R KEGG: ccr:CC_0836 sensor histidine kinase, putative; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein complement(3658455..3660206) Methylobacterium extorquens PA1 5831443 YP_001640759.1 CDS Mext_3301 NC_010172.1 3660314 3661273 R PFAM: glycosyl transferase family 2; KEGG: mca:MCA0619 glycosyl transferase, group 2 family protein; glycosyl transferase family protein complement(3660314..3661273) Methylobacterium extorquens PA1 5831444 YP_001640760.1 CDS Mext_3302 NC_010172.1 3661270 3662175 R KEGG: bch:Bcen2424_0875 rhamnosyltransferase; rhamnosyltransferase complement(3661270..3662175) Methylobacterium extorquens PA1 5831445 YP_001640761.1 CDS Mext_3303 NC_010172.1 3662247 3663710 R PFAM: peptidase M48 Ste24p; KEGG: xau:Xaut_2231 peptidase M48 Ste24p; peptidase M48 Ste24p complement(3662247..3663710) Methylobacterium extorquens PA1 5831446 YP_001640762.1 CDS Mext_3304 NC_010172.1 3663756 3664607 R KEGG: bbt:BBta_7541 hypothetical protein; hypothetical protein complement(3663756..3664607) Methylobacterium extorquens PA1 5833567 YP_001640763.1 CDS Mext_3305 NC_010172.1 3665341 3665748 D PFAM: helix-turn-helix domain protein; KEGG: oan:Oant_0753 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein 3665341..3665748 Methylobacterium extorquens PA1 5833568 YP_001640764.1 CDS Mext_3306 NC_010172.1 3665956 3667131 D PFAM: S-adenosylmethionine synthetase; KEGG: xau:Xaut_1816 methionine adenosyltransferase; methionine adenosyltransferase 3665956..3667131 Methylobacterium extorquens PA1 5833569 YP_001640765.1 CDS Mext_3307 NC_010172.1 3667141 3667878 D KEGG: pla:Plav_3624 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 3667141..3667878 Methylobacterium extorquens PA1 5833570 YP_001640766.1 CDS Mext_3308 NC_010172.1 3668132 3670864 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I complement(3668132..3670864) Methylobacterium extorquens PA1 5833571 YP_001640767.1 CDS Mext_3309 NC_010172.1 3671013 3671960 R PFAM: oxidoreductase molybdopterin binding; KEGG: tbd:Tbd_2349 hypothetical protein; molybdopterin binding oxidoreductase complement(3671013..3671960) Methylobacterium extorquens PA1 5833068 YP_001640768.1 CDS Mext_3310 NC_010172.1 3671957 3672829 R KEGG: rle:RL3018 putative transmembrane b-type cytochrome protein; putative transmembrane b-type cytochrome protein complement(3671957..3672829) Methylobacterium extorquens PA1 5833069 YP_001640769.1 CDS Mext_3311 NC_010172.1 3672994 3673305 R hypothetical protein complement(3672994..3673305) Methylobacterium extorquens PA1 5833070 YP_001640770.1 CDS pyrB NC_010172.1 3673580 3674527 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 3673580..3674527 Methylobacterium extorquens PA1 5833071 YP_001640771.1 CDS Mext_3313 NC_010172.1 3674533 3675837 D KEGG: nwi:Nwi_2008 dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; dihydroorotase, multifunctional complex type 3674533..3675837 Methylobacterium extorquens PA1 5833072 YP_001640772.1 CDS Mext_3314 NC_010172.1 3675834 3676442 D PFAM: protein of unknown function DUF205; KEGG: sme:SMc01362 hypothetical transmembrane protein; hypothetical protein 3675834..3676442 Methylobacterium extorquens PA1 5832540 YP_001640773.1 CDS Mext_3315 NC_010172.1 3676474 3677667 D TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: rpe:RPE_3377 DNA protecting protein DprA; DNA protecting protein DprA 3676474..3677667 Methylobacterium extorquens PA1 5832541 YP_001640774.1 CDS Mext_3316 NC_010172.1 3677958 3678818 D PFAM: lipolytic protein G-D-S-L family; KEGG: nha:Nham_0220 lipolytic enzyme, G-D-S-L; GDSL family lipase 3677958..3678818 Methylobacterium extorquens PA1 5832542 YP_001640775.1 CDS Mext_3317 NC_010172.1 3678815 3679966 D hypothetical protein 3678815..3679966 Methylobacterium extorquens PA1 5832543 YP_001640776.1 CDS Mext_3318 NC_010172.1 3680057 3680731 D PFAM: ThiJ/PfpI domain protein; KEGG: pfo:Pfl_1835 ThiJ/PfpI; ThiJ/PfpI domain-containing protein 3680057..3680731 Methylobacterium extorquens PA1 5832285 YP_001640777.1 CDS Mext_3319 NC_010172.1 3680728 3681210 R PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: pla:Plav_2841 Holliday junction resolvase YqgF; Holliday junction resolvase YqgF complement(3680728..3681210) Methylobacterium extorquens PA1 5832286 YP_001640778.1 CDS Mext_3320 NC_010172.1 3681222 3681800 R hypothetical protein complement(3681222..3681800) Methylobacterium extorquens PA1 5832287 YP_001640779.1 CDS Mext_3321 NC_010172.1 3682006 3682137 D hypothetical protein 3682006..3682137 Methylobacterium extorquens PA1 5832288 YP_001640780.1 CDS Mext_3322 NC_010172.1 3682296 3682583 D TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: rpc:RPC_2260 glutamyl-tRNA(Gln) amidotransferase, C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C 3682296..3682583 Methylobacterium extorquens PA1 5832289 YP_001640781.1 CDS gatA NC_010172.1 3682680 3684161 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 3682680..3684161 Methylobacterium extorquens PA1 5831541 YP_001640782.1 CDS Mext_3324 NC_010172.1 3684152 3684463 D hypothetical protein 3684152..3684463 Methylobacterium extorquens PA1 5831542 YP_001640783.1 CDS Mext_3325 NC_010172.1 3684522 3684845 R PFAM: Excinuclease ABC C subunit domain protein; KEGG: rpc:RPC_0376 excinuclease ABC, C subunit-like; excinuclease ABC subunit C complement(3684522..3684845) Methylobacterium extorquens PA1 5831543 YP_001640784.1 CDS Mext_3326 NC_010172.1 3684991 3688155 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rpa:RPA1498 RND multidrug efflux transporter MexD; hydrophobe/amphiphile efflux-1 (HAE1) family protein complement(3684991..3688155) Methylobacterium extorquens PA1 5831544 YP_001640785.1 CDS Mext_3327 NC_010172.1 3688234 3689559 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpa:RPA2735 putative RND multidrug efflux membrane fusion protein MexC precursor; RND family efflux transporter MFP subunit complement(3688234..3689559) Methylobacterium extorquens PA1 5831545 YP_001640786.1 CDS Mext_3328 NC_010172.1 3689940 3690368 R hypothetical protein complement(3689940..3690368) Methylobacterium extorquens PA1 5831726 YP_001640787.1 CDS Mext_3329 NC_010172.1 3690603 3691202 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpa:RPA1617 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 3690603..3691202 Methylobacterium extorquens PA1 5831727 YP_001640788.1 CDS Mext_3330 NC_010172.1 3691785 3693107 D KEGG: rsq:Rsph17025_0776 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-acetylhomoserine/O-acetylserine sulfhydrylase 3691785..3693107 Methylobacterium extorquens PA1 5831728 YP_001640789.1 CDS Mext_3331 NC_010172.1 3693109 3694131 D PFAM: 2OG-Fe(II) oxygenase; KEGG: mlo:mlr6892 hypothetical protein; 2OG-Fe(II) oxygenase 3693109..3694131 Methylobacterium extorquens PA1 5831729 YP_001640790.1 CDS Mext_3332 NC_010172.1 3694545 3694781 D hypothetical protein 3694545..3694781 Methylobacterium extorquens PA1 5831730 YP_001640791.1 CDS Mext_3333 NC_010172.1 3694873 3695268 R PFAM: Usg family protein; KEGG: bja:bsl5624 hypothetical protein; Usg family protein complement(3694873..3695268) Methylobacterium extorquens PA1 5832865 YP_001640792.1 CDS Mext_3334 NC_010172.1 3695529 3697151 R TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: bbt:BBta_2521 60 kDa chaperonin (protein Cpn60); chaperonin GroEL complement(3695529..3697151) Methylobacterium extorquens PA1 5832866 YP_001640793.1 CDS Mext_3335 NC_010172.1 3697187 3697477 R PFAM: chaperonin Cpn10; KEGG: smd:Smed_1282 chaperonin Cpn10; chaperonin Cpn10 complement(3697187..3697477) Methylobacterium extorquens PA1 5832867 YP_001640794.1 CDS Mext_3336 NC_010172.1 3697740 3698963 R PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: xau:Xaut_2768 acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase type 2 complement(3697740..3698963) Methylobacterium extorquens PA1 5832868 YP_001640795.1 CDS Mext_3337 NC_010172.1 3699253 3701661 R KEGG: bxe:Bxe_C0340 hypothetical protein; hypothetical protein complement(3699253..3701661) Methylobacterium extorquens PA1 5833482 YP_001640796.1 CDS Mext_3338 NC_010172.1 3701765 3702847 D KEGG: csa:Csal_0183 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic components-like protein 3701765..3702847 Methylobacterium extorquens PA1 5833483 YP_001640797.1 CDS Mext_3339 NC_010172.1 3702849 3704069 D PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: bbt:BBta_4886 putative sulfite oxidase (SoxC); molybdopterin binding oxidoreductase 3702849..3704069 Methylobacterium extorquens PA1 5833484 YP_001640798.1 CDS Mext_3340 NC_010172.1 3704059 3704643 D KEGG: bch:Bcen2424_6593 cytochrome c, class I; cytochrome c, class I 3704059..3704643 Methylobacterium extorquens PA1 5833485 YP_001640799.1 CDS Mext_3341 NC_010172.1 3704640 3705608 D KEGG: ppu:PP_3229 periplasmic aliphatic sulfonate-binding protein, putative; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter substrate-binding protein 3704640..3705608 Methylobacterium extorquens PA1 5833486 YP_001640800.1 CDS Mext_3342 NC_010172.1 3705614 3706660 D PFAM: luciferase family protein; KEGG: bbt:BBta_3300 putative alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 3705614..3706660 Methylobacterium extorquens PA1 5834575 YP_001640801.1 CDS Mext_3343 NC_010172.1 3706657 3708066 D TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: gbe:GbCGDNIH1_1636 xanthine permease; xanthine permease 3706657..3708066 Methylobacterium extorquens PA1 5834576 YP_001640802.1 CDS Mext_3344 NC_010172.1 3707982 3708638 R PFAM: DSBA oxidoreductase; KEGG: ani:AN6936.2 hypothetical protein; DSBA oxidoreductase complement(3707982..3708638) Methylobacterium extorquens PA1 5834577 YP_001640803.1 CDS Mext_3345 NC_010172.1 3708635 3709516 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pae:PA2294 putative sulfonate transport system ATP-binding protein; ABC transporter-like protein complement(3708635..3709516) Methylobacterium extorquens PA1 5834578 YP_001640804.1 CDS Mext_3346 NC_010172.1 3709513 3710388 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppu:PP_0208 nitrate ABC transporter, permease protein, putative; binding-protein-dependent transport system inner membrane protein complement(3709513..3710388) Methylobacterium extorquens PA1 5834579 YP_001640805.1 CDS Mext_3347 NC_010172.1 3710385 3711827 R KEGG: bbt:BBta_4880 putative ABC transporter, substrate-binding protein; putative ABC transporter substrate-binding protein complement(3710385..3711827) Methylobacterium extorquens PA1 5835047 YP_001640806.1 CDS Mext_3348 NC_010172.1 3712164 3712928 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: nwi:Nwi_0675 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 3712164..3712928 Methylobacterium extorquens PA1 5835048 YP_001640807.1 CDS Mext_3349 NC_010172.1 3712966 3713925 R PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: bbt:BBta_4882 hypothetical protein; heat domain-containing protein complement(3712966..3713925) Methylobacterium extorquens PA1 5835049 YP_001640808.1 CDS Mext_3350 NC_010172.1 3713931 3714164 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nwi:Nwi_0677 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin complement(3713931..3714164) Methylobacterium extorquens PA1 5835050 YP_001640809.1 CDS Mext_3351 NC_010172.1 3714179 3715927 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbt:BBta_4884 putative fumarate reductase/succinate dehydrogenase, flavoprotein subunit; putative oxidoreductase complement(3714179..3715927) Methylobacterium extorquens PA1 5835051 YP_001640810.1 CDS Mext_3352 NC_010172.1 3715939 3716262 R PFAM: protein of unknown function DUF971; KEGG: bbt:BBta_4885 hypothetical protein; hypothetical protein complement(3715939..3716262) Methylobacterium extorquens PA1 5835234 YP_001640811.1 CDS Mext_3353 NC_010172.1 3716805 3716978 R hypothetical protein complement(3716805..3716978) Methylobacterium extorquens PA1 5835235 YP_001640812.1 CDS Mext_3354 NC_010172.1 3717390 3719393 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: smd:Smed_2842 diguanylate cyclase/phosphodiesterase; diguanylate cyclase complement(3717390..3719393) Methylobacterium extorquens PA1 5835236 YP_001640813.1 CDS Mext_3355 NC_010172.1 3719786 3720853 D KEGG: ret:RHE_PE00106 putative methyltransferase protein; hypothetical protein 3719786..3720853 Methylobacterium extorquens PA1 5835237 YP_001640814.1 CDS Mext_3357 NC_010172.1 3721492 3721863 R PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: rru:Rru_A0942 GreA/GreB family elongation factor; transcription elongation factor GreA/GreB domain-containing protein complement(3721492..3721863) Methylobacterium extorquens PA1 5833926 YP_001640815.1 CDS Mext_3358 NC_010172.1 3722801 3723286 D KEGG: rpd:RPD_0852 hypothetical protein; hypothetical protein 3722801..3723286 Methylobacterium extorquens PA1 5833927 YP_001640816.1 CDS Mext_3359 NC_010172.1 3723581 3724027 R KEGG: xau:Xaut_2147 hypothetical protein; hypothetical protein complement(3723581..3724027) Methylobacterium extorquens PA1 5833928 YP_001640817.1 CDS Mext_3360 NC_010172.1 3724112 3724357 R hypothetical protein complement(3724112..3724357) Methylobacterium extorquens PA1 5833929 YP_001640818.1 CDS Mext_3361 NC_010172.1 3724354 3724698 R hypothetical protein complement(3724354..3724698) Methylobacterium extorquens PA1 5835290 YP_001640819.1 CDS Mext_3362 NC_010172.1 3725376 3727412 D KEGG: mes:Meso_1904 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein 3725376..3727412 Methylobacterium extorquens PA1 5835291 YP_001640820.1 CDS Mext_3363 NC_010172.1 3727493 3727873 R PFAM: response regulator receiver; KEGG: rpa:RPA1481 response regulator receiver (CheY-like protein); response regulator receiver complement(3727493..3727873) Methylobacterium extorquens PA1 5835292 YP_001640821.1 CDS Mext_3364 NC_010172.1 3727933 3728268 D KEGG: rpc:RPC_3529 signal transduction histidine kinase; signal transduction histidine kinase 3727933..3728268 Methylobacterium extorquens PA1 5835293 YP_001640822.1 CDS Mext_3365 NC_010172.1 3728490 3729452 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_4059 transcriptional regulator, LysR family; LysR substrate-binding protein complement(3728490..3729452) Methylobacterium extorquens PA1 5835294 YP_001640823.1 CDS Mext_3366 NC_010172.1 3729755 3730948 D PFAM: Extracellular ligand-binding receptor; KEGG: xau:Xaut_4060 extracellular ligand-binding receptor; extracellular ligand-binding receptor 3729755..3730948 Methylobacterium extorquens PA1 5835279 YP_001640824.1 CDS Mext_3367 NC_010172.1 3731075 3731950 D PFAM: inner-membrane translocator; KEGG: xau:Xaut_4061 inner-membrane translocator; inner-membrane translocator 3731075..3731950 Methylobacterium extorquens PA1 5835280 YP_001640825.1 CDS Mext_3368 NC_010172.1 3731947 3733728 D PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_4062 ABC transporter related; ABC transporter-like protein 3731947..3733728 Methylobacterium extorquens PA1 5835281 YP_001640826.1 CDS Mext_3369 NC_010172.1 3733728 3734465 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_4063 ABC transporter related; ABC transporter-like protein 3733728..3734465 Methylobacterium extorquens PA1 5835282 YP_001640827.1 CDS Mext_3370 NC_010172.1 3734547 3735248 D PFAM: cyclase family protein; KEGG: xau:Xaut_4064 cyclase family protein; cyclase family protein 3734547..3735248 Methylobacterium extorquens PA1 5835283 YP_001640828.1 CDS Mext_3371 NC_010172.1 3735303 3736712 D PFAM: Amidase; KEGG: xau:Xaut_4065 amidase; amidase 3735303..3736712 Methylobacterium extorquens PA1 5834930 YP_001640829.1 CDS amiE NC_010172.1 3737251 3738303 R aliphatic amidase; catalyzes the hydrolysis of short-chain aliphatic amides to their organic acids and can also transfer the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates; acylamide amidohydrolase complement(3737251..3738303) Methylobacterium extorquens PA1 5834931 YP_001640830.1 CDS Mext_3373 NC_010172.1 3738378 3739838 R PFAM: Carbohydrate-selective porin OprB; KEGG: gbe:GbCGDNIH1_1489 porin; carbohydrate-selective porin OprB complement(3738378..3739838) Methylobacterium extorquens PA1 5834932 YP_001640831.1 CDS Mext_3374 NC_010172.1 3740005 3740322 R TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: gbe:GbCGDNIH1_1830 putative regulatory protein FmdB; FmdB family regulatory protein complement(3740005..3740322) Methylobacterium extorquens PA1 5834933 YP_001640832.1 CDS Mext_3375 NC_010172.1 3740387 3741616 R PFAM: Acetamidase/Formamidase; KEGG: rpe:RPE_4597 formamidase; formamidase complement(3740387..3741616) Methylobacterium extorquens PA1 5834693 YP_001640833.1 CDS Mext_3376 NC_010172.1 3741780 3742796 R PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO5867 homoserine O-acetyltransferase; hypothetical protein complement(3741780..3742796) Methylobacterium extorquens PA1 5834694 YP_001640834.1 CDS Mext_3377 NC_010172.1 3742808 3743554 R KEGG: rpa:RPA1254 putative ATP-binding component of ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtE complement(3742808..3743554) Methylobacterium extorquens PA1 5834695 YP_001640835.1 CDS Mext_3378 NC_010172.1 3743568 3744356 R TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: bja:blr0970 ABC transporter ATP-binding protein; urea ABC transporter ATP-binding protein UrtD complement(3743568..3744356) Methylobacterium extorquens PA1 5834696 YP_001640836.1 CDS Mext_3379 NC_010172.1 3744368 3745549 R TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: rpa:RPA1252 putative high-affinity branched-chain amino acid transport system permease protein; urea ABC transporter permease UrtC complement(3744368..3745549) Methylobacterium extorquens PA1 5834697 YP_001640837.1 CDS Mext_3380 NC_010172.1 3745563 3746489 R TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: bja:blr0968 ABC transporter permease protein; urea ABC transporter permease UrtB complement(3745563..3746489) Methylobacterium extorquens PA1 5834958 YP_001640838.1 CDS Mext_3381 NC_010172.1 3746599 3747852 R KEGG: bja:blr0967 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein complement(3746599..3747852) Methylobacterium extorquens PA1 5834959 YP_001640839.1 CDS Mext_3382 NC_010172.1 3748310 3751525 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bra:BRADO6898 sensor histidine kinase with a response regulator receiver domain (two-component signal transduction system); ATPase domain-containing protein 3748310..3751525 Methylobacterium extorquens PA1 5834960 YP_001640840.1 CDS Mext_3383 NC_010172.1 3751518 3752420 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rpa:RPA1248 two-component transcriptional regulator, LuxR family; response regulator receiver 3751518..3752420 Methylobacterium extorquens PA1 5834961 YP_001640841.1 CDS Mext_3384 NC_010172.1 3752936 3753739 D PFAM: Invasion associated locus B family protein; KEGG: rpd:RPD_2626 invasion associated locus B; invasion associated locus B family protein 3752936..3753739 Methylobacterium extorquens PA1 5834962 YP_001640842.1 CDS Mext_3385 NC_010172.1 3754290 3755048 D catalyzes the formation of precorrin 6x from precorrin 5; precorrin 6A synthase 3754290..3755048 Methylobacterium extorquens PA1 5835186 YP_001640843.1 CDS Mext_3386 NC_010172.1 3755270 3756610 D KEGG: rso:RS03125 probable transmembrane protein; hypothetical protein 3755270..3756610 Methylobacterium extorquens PA1 5835187 YP_001640844.1 CDS Mext_3387 NC_010172.1 3756630 3757259 R KEGG: psb:Psyr_3532 PAS; hypothetical protein complement(3756630..3757259) Methylobacterium extorquens PA1 5835188 YP_001640845.1 CDS Mext_3388 NC_010172.1 3757557 3758246 D PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bja:blr8197 probable partition protein; cobyrinic acid ac-diamide synthase 3757557..3758246 Methylobacterium extorquens PA1 5835189 YP_001640846.1 CDS Mext_3389 NC_010172.1 3758230 3758583 D hypothetical protein 3758230..3758583 Methylobacterium extorquens PA1 5835190 YP_001640847.1 CDS Mext_3390 NC_010172.1 3758849 3760273 D TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: nwi:Nwi_1466 rare lipoprotein A; rare lipoprotein A 3758849..3760273 Methylobacterium extorquens PA1 5835052 YP_001640848.1 CDS Mext_3391 NC_010172.1 3760449 3762347 R KEGG: smd:Smed_4175 hypothetical protein; hypothetical protein complement(3760449..3762347) Methylobacterium extorquens PA1 5835053 YP_001640849.1 CDS Mext_3392 NC_010172.1 3762540 3762866 R TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: mes:Meso_1815 iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly accessory protein complement(3762540..3762866) Methylobacterium extorquens PA1 5835054 YP_001640850.1 CDS Mext_3393 NC_010172.1 3762993 3764246 D KEGG: mes:Meso_1814 putative deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; deoxyguanosinetriphosphate triphosphohydrolase 3762993..3764246 Methylobacterium extorquens PA1 5835055 YP_001640851.1 CDS Mext_3394 NC_010172.1 3764274 3764819 R KEGG: cel:T20B6.3 T20B6.3; hypothetical protein complement(3764274..3764819) Methylobacterium extorquens PA1 5835056 YP_001640852.1 CDS Mext_3395 NC_010172.1 3764964 3765425 D PFAM: thioesterase superfamily protein; KEGG: bpd:BURPS668_1648 thioesterase family protein; thioesterase superfamily protein 3764964..3765425 Methylobacterium extorquens PA1 5835368 YP_001640853.1 CDS Mext_3396 NC_010172.1 3765520 3767277 D KEGG: nha:Nham_1758 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase 3765520..3767277 Methylobacterium extorquens PA1 5835369 YP_001640854.1 CDS Mext_3397 NC_010172.1 3767307 3768725 D PFAM: Sporulation domain protein; KEGG: rpd:RPD_2794 sporulation related; sporulation domain-containing protein 3767307..3768725 Methylobacterium extorquens PA1 5835370 YP_001640855.1 CDS Mext_3398 NC_010172.1 3768935 3769966 D PFAM: glycoside hydrolase family 3 domain protein; KEGG: ccr:CC_2006 glycosyl hydrolase, family 3; beta-N-acetylhexosaminidase 3768935..3769966 Methylobacterium extorquens PA1 5835371 YP_001640856.1 CDS tatA NC_010172.1 3770232 3770519 D TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 3770232..3770519 Methylobacterium extorquens PA1 5835372 YP_001640857.1 CDS Mext_3400 NC_010172.1 3770664 3771125 D TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: xau:Xaut_4406 twin-arginine translocation protein, TatB subunit; twin-arginine translocation protein subunit TatB 3770664..3771125 Methylobacterium extorquens PA1 5835364 YP_001640858.1 CDS Mext_3401 NC_010172.1 3771122 3771922 D TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: bja:bll4749 SEC-independent protein translocase protein; Sec-independent protein translocase subunit TatC 3771122..3771922 Methylobacterium extorquens PA1 5835365 YP_001640859.1 CDS Mext_3402 NC_010172.1 3772072 3772770 D KEGG: ade:Adeh_2310 hypothetical protein; hypothetical protein 3772072..3772770 Methylobacterium extorquens PA1 5835366 YP_001640860.1 CDS Mext_3403 NC_010172.1 3772777 3773952 R PFAM: major facilitator superfamily MFS_1; KEGG: azo:azo0581 putative transmembrane efflux precursor protein; major facilitator transporter complement(3772777..3773952) Methylobacterium extorquens PA1 5835367 YP_001640861.1 CDS Mext_3404 NC_010172.1 3774385 3774954 D PFAM: NADPH-dependent FMN reductase; KEGG: rsq:Rsph17025_0771 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 3774385..3774954 Methylobacterium extorquens PA1 5831348 YP_001640862.1 CDS Mext_3405 NC_010172.1 3774956 3775939 D KEGG: mlo:mll4559 aliphatic sulfonate binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter substrate-binding protein 3774956..3775939 Methylobacterium extorquens PA1 5831349 YP_001640863.1 CDS Mext_3406 NC_010172.1 3775936 3776796 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_1867 putative ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 3775936..3776796 Methylobacterium extorquens PA1 5831350 YP_001640864.1 CDS Mext_3407 NC_010172.1 3776836 3777627 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:RL2767 putative aliphatic sulfonates transport ATP-binding component of ABC transporter; ABC transporter-like protein 3776836..3777627 Methylobacterium extorquens PA1 5831351 YP_001640865.1 CDS Mext_3408 NC_010172.1 3777656 3778831 D PFAM: luciferase family protein; KEGG: gbe:GbCGDNIH1_0256 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 3777656..3778831 Methylobacterium extorquens PA1 5831352 YP_001640866.1 CDS Mext_3409 NC_010172.1 3778850 3779824 D KEGG: bbt:BBta_2507 putative ABC transporter, substrate binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter substrate-binding protein 3778850..3779824 Methylobacterium extorquens PA1 5831361 YP_001640867.1 CDS Mext_3410 NC_010172.1 3779924 3780886 D KEGG: bbt:BBta_3178 putative ABC transporter, substrate-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter substrate-binding protein 3779924..3780886 Methylobacterium extorquens PA1 5831362 YP_001640868.1 CDS Mext_3411 NC_010172.1 3780921 3782303 D KEGG: gbe:GbCGDNIH1_0532 pyridine nucleotide-disulfide oxidoreductase family; pyridine nucleotide-disulfide oxidoreductase family protein 3780921..3782303 Methylobacterium extorquens PA1 5831363 YP_001640869.1 CDS Mext_3412 NC_010172.1 3782638 3782847 D KEGG: pde:Pden_4788 hypothetical protein; hypothetical protein 3782638..3782847 Methylobacterium extorquens PA1 5831364 YP_001640870.1 CDS Mext_3413 NC_010172.1 3783087 3783779 D KEGG: bja:blr1215 hypothetical protein; hypothetical protein 3783087..3783779 Methylobacterium extorquens PA1 5831365 YP_001640871.1 CDS Mext_3414 NC_010172.1 3783895 3785055 R KEGG: xau:Xaut_3913 hypothetical protein; hypothetical protein complement(3783895..3785055) Methylobacterium extorquens PA1 5833678 YP_001640872.1 CDS Mext_3415 NC_010172.1 3785236 3788586 D PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: bbt:BBta_2947 hypothetical protein; transglutaminase domain-containing protein 3785236..3788586 Methylobacterium extorquens PA1 5833679 YP_001640873.1 CDS Mext_3416 NC_010172.1 3788583 3791186 D PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bja:blr2978 hypothetical protein; hypothetical protein 3788583..3791186 Methylobacterium extorquens PA1 5833680 YP_001640874.1 CDS Mext_3417 NC_010172.1 3791183 3792085 D PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: rpa:RPA3752 transglutaminase-like domain; transglutaminase domain-containing protein 3791183..3792085 Methylobacterium extorquens PA1 5833681 YP_001640875.1 CDS Mext_3418 NC_010172.1 3792099 3792767 R PFAM: regulatory protein TetR; KEGG: rle:RL0480 putative TetR family transcriptional regulator; regulatory protein TetR complement(3792099..3792767) Methylobacterium extorquens PA1 5833682 YP_001640876.1 CDS Mext_3419 NC_010172.1 3792849 3793589 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpa:RPA1853 putative short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3792849..3793589 Methylobacterium extorquens PA1 5831839 YP_001640877.1 CDS Mext_3420 NC_010172.1 3793629 3794906 R PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_3226 drug resistance transporter, Bcr/CflA subfamily; major facilitator transporter complement(3793629..3794906) Methylobacterium extorquens PA1 5831840 YP_001640878.1 CDS Mext_3421 NC_010172.1 3795125 3795712 R KEGG: nha:Nham_0661 hypothetical protein; hypothetical protein complement(3795125..3795712) Methylobacterium extorquens PA1 5831841 YP_001640879.1 CDS Mext_3422 NC_010172.1 3795957 3797738 D PFAM: beta-lactamase; KEGG: sus:Acid_2490 beta-lactamase; beta-lactamase 3795957..3797738 Methylobacterium extorquens PA1 5831842 YP_001640880.1 CDS Mext_3423 NC_010172.1 3797926 3799449 D PFAM: Aldehyde Dehydrogenase_; KEGG: mlo:mll6639 aldehyde dehydrogenase; aldehyde dehydrogenase 3797926..3799449 Methylobacterium extorquens PA1 5831843 YP_001640881.1 CDS Mext_3424 NC_010172.1 3799939 3801615 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_2742 methyl-accepting chemotaxis sensory transducer; chemotaxis sensory transducer protein 3799939..3801615 Methylobacterium extorquens PA1 5832351 YP_001640882.1 CDS Mext_3425 NC_010172.1 3801726 3803021 R PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: atc:AGR_C_3079 hypothetical protein; Orn/DAP/Arg decarboxylase 2 complement(3801726..3803021) Methylobacterium extorquens PA1 5832352 YP_001640883.1 CDS Mext_3426 NC_010172.1 3803307 3804824 R PFAM: AMP-dependent synthetase and ligase; KEGG: atc:AGR_C_3078 hypothetical protein; AMP-dependent synthetase and ligase complement(3803307..3804824) Methylobacterium extorquens PA1 5832353 YP_001640884.1 CDS Mext_3427 NC_010172.1 3804844 3805107 R hypothetical protein complement(3804844..3805107) Methylobacterium extorquens PA1 5832354 YP_001640885.1 CDS Mext_3428 NC_010172.1 3805317 3805844 D PFAM: DoxX family protein; KEGG: xau:Xaut_0302 DoxX family protein; DoxX family protein 3805317..3805844 Methylobacterium extorquens PA1 5831658 YP_001640886.1 CDS Mext_3429 NC_010172.1 3805801 3807282 R PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_0838 major facilitator superfamily MFS_1; major facilitator transporter complement(3805801..3807282) Methylobacterium extorquens PA1 5831659 YP_001640887.1 CDS Mext_3430 NC_010172.1 3807612 3808499 D KEGG: bra:BRADO5687 conserved hypothetical protein; putative exported protein; hypothetical protein 3807612..3808499 Methylobacterium extorquens PA1 5831660 YP_001640888.1 CDS Mext_3431 NC_010172.1 3808583 3810388 R PFAM: amidohydrolase; KEGG: mes:Meso_1082 amidohydrolase; adenine deaminase complement(3808583..3810388) Methylobacterium extorquens PA1 5831661 YP_001640889.1 CDS Mext_3432 NC_010172.1 3810473 3811192 R PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: xau:Xaut_0837 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ complement(3810473..3811192) Methylobacterium extorquens PA1 5831662 YP_001640890.1 CDS Mext_3433 NC_010172.1 3811335 3812462 R PFAM: Ppx/GppA phosphatase; KEGG: ret:RHE_CH00788 exopolyphosphatase protein; Ppx/GppA phosphatase complement(3811335..3812462) Methylobacterium extorquens PA1 5834099 YP_001640891.1 CDS Mext_3434 NC_010172.1 3812609 3813769 R PFAM: glycosyl transferase family 2; KEGG: rba:RB11941 conserved hypothetical protein-putative glycosyl transferase; glycosyl transferase family protein complement(3812609..3813769) Methylobacterium extorquens PA1 5834100 YP_001640892.1 CDS Mext_3435 NC_010172.1 3813766 3814581 R PFAM: phospholipid/glycerol acyltransferase; KEGG: rba:RB11942 conserved hypothetical protein-putative acyltransferase; phospholipid/glycerol acyltransferase complement(3813766..3814581) Methylobacterium extorquens PA1 5834101 YP_001640893.1 CDS Mext_3436 NC_010172.1 3814593 3816131 R TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rba:RB11943 phytoene dehydrogenase; phytoene desaturase complement(3814593..3816131) Methylobacterium extorquens PA1 5834102 YP_001640894.1 CDS Mext_3437 NC_010172.1 3816230 3817147 R PFAM: glutamine amidotransferase class-I; KEGG: bbt:BBta_7211 putative glutamine amidotransferase, class-I; glutamine amidotransferase complement(3816230..3817147) Methylobacterium extorquens PA1 5834103 YP_001640895.1 CDS Mext_3438 NC_010172.1 3817238 3818464 R PFAM: ABC-2 type transporter; KEGG: bra:BRADO6504 putative ABC transporter (permease protein); ABC-2 type transporter complement(3817238..3818464) Methylobacterium extorquens PA1 5833295 YP_001640896.1 CDS Mext_3439 NC_010172.1 3818461 3819429 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO6503 putative ABC transporter (ATP-binding protein); ABC transporter-like protein complement(3818461..3819429) Methylobacterium extorquens PA1 5833296 YP_001640897.1 CDS Mext_3440 NC_010172.1 3819437 3819865 R KEGG: hha:Hhal_1327 hypothetical protein; hypothetical protein complement(3819437..3819865) Methylobacterium extorquens PA1 5833297 YP_001640898.1 CDS Mext_3441 NC_010172.1 3819865 3821457 R TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rba:RB10270 phytoene dehydrogenase; phytoene desaturase complement(3819865..3821457) Methylobacterium extorquens PA1 5833298 YP_001640899.1 CDS Mext_3442 NC_010172.1 3821570 3823069 R KEGG: bmb:BruAb1_1523 hypothetical protein; hypothetical protein complement(3821570..3823069) Methylobacterium extorquens PA1 5833299 YP_001640900.1 CDS Mext_3443 NC_010172.1 3823184 3823993 R PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mes:Meso_2208 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU complement(3823184..3823993) Methylobacterium extorquens PA1 5833398 YP_001640901.1 CDS Mext_3444 NC_010172.1 3824063 3824536 R PFAM: MaoC domain protein dehydratase; KEGG: xau:Xaut_2482 MaoC domain protein dehydratase; dehydratase complement(3824063..3824536) Methylobacterium extorquens PA1 5833399 YP_001640902.1 CDS Mext_3445 NC_010172.1 3824736 3825353 D PFAM: cation efflux protein; KEGG: mes:Meso_4140 putative transporter; cation efflux protein 3824736..3825353 Methylobacterium extorquens PA1 5833400 YP_001640903.1 CDS Mext_3446 NC_010172.1 3825390 3826238 D PFAM: metallophosphoesterase; KEGG: eba:ebA6067 predicted calcineurin-like phosphoesterase; metallophosphoesterase 3825390..3826238 Methylobacterium extorquens PA1 5833401 YP_001640904.1 CDS Mext_3447 NC_010172.1 3826331 3826552 D hypothetical protein 3826331..3826552 Methylobacterium extorquens PA1 5833402 YP_001640905.1 CDS Mext_3448 NC_010172.1 3826677 3827819 D KEGG: pau:PA14_24370 hypothetical protein; hypothetical protein 3826677..3827819 Methylobacterium extorquens PA1 5833228 YP_001640906.1 CDS Mext_3449 NC_010172.1 3827870 3828481 D PFAM: Glutathione S-transferase domain; KEGG: vei:Veis_2181 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 3827870..3828481 Methylobacterium extorquens PA1 5833229 YP_001640907.1 CDS Mext_3450 NC_010172.1 3828652 3828864 D hypothetical protein 3828652..3828864 Methylobacterium extorquens PA1 5833230 YP_001640908.1 CDS Mext_3451 NC_010172.1 3829057 3830250 R PFAM: amidinotransferase; KEGG: nwi:Nwi_2321 amidinotransferase; non-specific serine/threonine protein kinase complement(3829057..3830250) Methylobacterium extorquens PA1 5833231 YP_001640909.1 CDS Mext_3452 NC_010172.1 3830402 3831595 D TIGRFAM: membrane protein; PFAM: conserved hypothetical protein; KEGG: noc:Noc_1748 conserved hypothetical protein 374; membrane protein 3830402..3831595 Methylobacterium extorquens PA1 5833232 YP_001640910.1 CDS Mext_3453 NC_010172.1 3831586 3832209 D PFAM: toluene tolerance family protein; KEGG: gbe:GbCGDNIH1_2403 toluene transport system Ttg2D protein; toluene tolerance family protein 3831586..3832209 Methylobacterium extorquens PA1 5832088 YP_001640911.1 CDS Mext_3454 NC_010172.1 3832393 3833589 D KEGG: bps:BPSL0293 putative glucosyltransferase; putative glucosyltransferase 3832393..3833589 Methylobacterium extorquens PA1 5832089 YP_001640912.1 CDS Mext_3455 NC_010172.1 3833647 3835071 D KEGG: zmo:ZMO0973 Fe-S oxidoreductase; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; hopanoid biosynthesis associated radical SAM protein HpnJ 3833647..3835071 Methylobacterium extorquens PA1 5832090 YP_001640913.1 CDS Mext_3456 NC_010172.1 3835201 3836043 D TIGRFAM: hopanoid biosynthesis associated protein HpnK; PFAM: YdjC family protein; KEGG: zmo:ZMO0974 hypothetical protein; hopanoid biosynthesis associated protein HpnK 3835201..3836043 Methylobacterium extorquens PA1 5832091 YP_001640914.1 CDS Mext_3457 NC_010172.1 3836287 3836790 D KEGG: bmb:BruAb2_0848 hypothetical protein; hypothetical protein 3836287..3836790 Methylobacterium extorquens PA1 5832092 YP_001640915.1 CDS Mext_3458 NC_010172.1 3836925 3838934 R TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: rpe:RPE_1817 hypothetical protein; hopanoid biosynthesis associated RND transporter like protein HpnN complement(3836925..3838934) Methylobacterium extorquens PA1 5835119 YP_001640916.1 CDS Mext_3460 NC_010172.1 3840322 3841485 D TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; KEGG: reh:H16_B2170 predicted Fe-S oxidoreductase; hopanoid biosynthesis associated radical SAM protein HpnH 3840322..3841485 Methylobacterium extorquens PA1 5835121 YP_001640917.1 CDS Mext_3461 NC_010172.1 3841680 3842372 R KEGG: bja:blr3005 hypothetical protein; hypothetical protein complement(3841680..3842372) Methylobacterium extorquens PA1 5835122 YP_001640918.1 CDS Mext_3462 NC_010172.1 3842384 3843550 R PFAM: polysaccharide export protein; KEGG: xau:Xaut_3820 polysaccharide export protein; polysaccharide export protein complement(3842384..3843550) Methylobacterium extorquens PA1 5832431 YP_001640919.1 CDS Mext_3463 NC_010172.1 3843855 3844397 D KEGG: bra:BRADO5812 putative bifunctional: 6-phosphogluconolactonase (N-terminal) (Pgl); D-gluconate kinase (C-terminal); TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; carbohydrate kinase 3843855..3844397 Methylobacterium extorquens PA1 5832432 YP_001640920.1 CDS Mext_3464 NC_010172.1 3844406 3845209 D TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: rpa:RPA3639 Cof-subfamily: Cof-like hydrolase; cof family hydrolase 3844406..3845209 Methylobacterium extorquens PA1 5832433 YP_001640921.1 CDS Mext_3465 NC_010172.1 3845457 3846353 D PFAM: Lytic transglycosylase catalytic; KEGG: bja:blr6654 probable transglycosylase; lytic transglycosylase 3845457..3846353 Methylobacterium extorquens PA1 5832434 YP_001640922.1 CDS rpmF NC_010172.1 3846511 3846699 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 3846511..3846699 Methylobacterium extorquens PA1 5832435 YP_001640923.1 CDS Mext_3467 NC_010172.1 3846782 3847030 R hypothetical protein complement(3846782..3847030) Methylobacterium extorquens PA1 5831343 YP_001640924.1 CDS Mext_3468 NC_010172.1 3847252 3847863 R TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: xau:Xaut_3109 polyhydroxyalkonate synthesis repressor, PhaR; polyhydroxyalkanoate synthesis repressor PhaR complement(3847252..3847863) Methylobacterium extorquens PA1 5831344 YP_001640925.1 CDS Mext_3469 NC_010172.1 3848189 3849373 D KEGG: bra:BRADO0562 acetyl-CoA acetyltransferase with thiolase domain (acetoacetyl-CoA thiolase); TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 3848189..3849373 Methylobacterium extorquens PA1 5831345 YP_001640926.1 CDS Mext_3470 NC_010172.1 3849688 3850416 D TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xau:Xaut_3107 acetoacetyl-CoA reductase; acetoacetyl-CoA reductase 3849688..3850416 Methylobacterium extorquens PA1 5831346 YP_001640927.1 CDS Mext_3471 NC_010172.1 3850572 3851546 D Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 3850572..3851546 Methylobacterium extorquens PA1 5831347 YP_001640928.1 CDS Mext_3472 NC_010172.1 3851575 3852834 R PFAM: peptidase M29 aminopeptidase II; KEGG: mes:Meso_3021 peptidase M29, aminopeptidase II; peptidase M29 aminopeptidase II complement(3851575..3852834) Methylobacterium extorquens PA1 5834497 YP_001640929.1 CDS Mext_3473 NC_010172.1 3852912 3853205 R KEGG: ret:RHE_CH00014 hypothetical protein; hypothetical protein complement(3852912..3853205) Methylobacterium extorquens PA1 5834498 YP_001640930.1 CDS Mext_3474 NC_010172.1 3853583 3855034 R PFAM: FAD linked oxidase domain protein; KEGG: xau:Xaut_2518 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein complement(3853583..3855034) Methylobacterium extorquens PA1 5834499 YP_001640931.1 CDS Mext_3475 NC_010172.1 3855242 3855937 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reh:H16_A0361 putative fumarylacetoacetat hydroxylase; fumarylacetoacetate (FAA) hydrolase 3855242..3855937 Methylobacterium extorquens PA1 5834500 YP_001640932.1 CDS Mext_3476 NC_010172.1 3855934 3856461 D PFAM: NUDIX hydrolase; KEGG: mes:Meso_2186 NUDIX hydrolase; NUDIX hydrolase 3855934..3856461 Methylobacterium extorquens PA1 5834501 YP_001640933.1 CDS Mext_3477 NC_010172.1 3856920 3858197 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ret:RHE_CH01517 putative nucleotide sugar transaminase protein; DegT/DnrJ/EryC1/StrS aminotransferase 3856920..3858197 Methylobacterium extorquens PA1 5834382 YP_001640934.1 CDS Mext_3478 NC_010172.1 3858353 3859081 R PFAM: Resolvase domain; KEGG: bja:bll5010 putative resolvase; resolvase domain-containing protein complement(3858353..3859081) Methylobacterium extorquens PA1 5834383 YP_001640935.1 CDS Mext_3479 NC_010172.1 3859151 3860272 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_0552 transcriptional regulator of molybdate metabolism, LysR family; regulatory protein LysR 3859151..3860272 Methylobacterium extorquens PA1 5834384 YP_001640936.1 CDS Mext_3480 NC_010172.1 3860667 3861416 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bra:BRADO3435 putative transcriptional regulatory protein, Crp/Fnr family; cyclic nucleotide-binding protein 3860667..3861416 Methylobacterium extorquens PA1 5835349 YP_001640937.1 CDS Mext_3481 NC_010172.1 3861599 3861877 R hypothetical protein complement(3861599..3861877) Methylobacterium extorquens PA1 5835350 YP_001640938.1 CDS Mext_3482 NC_010172.1 3862197 3862460 D KEGG: bra:BRADO3416 hypothetical protein; hypothetical protein 3862197..3862460 Methylobacterium extorquens PA1 5835351 YP_001640939.1 CDS Mext_3483 NC_010172.1 3862590 3863012 D hypothetical protein 3862590..3863012 Methylobacterium extorquens PA1 5835352 YP_001640940.1 CDS Mext_3484 NC_010172.1 3863113 3864189 R PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: rpb:RPB_0305 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase type 2 complement(3863113..3864189) Methylobacterium extorquens PA1 5835353 YP_001640941.1 CDS Mext_3485 NC_010172.1 3864195 3864752 R PFAM: OsmC family protein; KEGG: xau:Xaut_2612 OsmC family protein; OsmC family protein complement(3864195..3864752) Methylobacterium extorquens PA1 5834417 YP_001640942.1 CDS Mext_3486 NC_010172.1 3864764 3865621 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_0309 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3864764..3865621) Methylobacterium extorquens PA1 5834418 YP_001640943.1 CDS Mext_3487 NC_010172.1 3865618 3866844 R KEGG: rpb:RPB_0308 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal complement(3865618..3866844) Methylobacterium extorquens PA1 5834419 YP_001640944.1 CDS Mext_3488 NC_010172.1 3866867 3867622 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_0307 ABC transporter related; ABC transporter-like protein complement(3866867..3867622) Methylobacterium extorquens PA1 5834420 YP_001640945.1 CDS Mext_3489 NC_010172.1 3868266 3869747 D PFAM: Carbohydrate-selective porin OprB; KEGG: gbe:GbCGDNIH1_1489 porin; carbohydrate-selective porin OprB 3868266..3869747 Methylobacterium extorquens PA1 5834421 YP_001640946.1 CDS Mext_3490 NC_010172.1 3869802 3871205 D KEGG: bbt:BBta_2543 putative monooxygenase; putative monooxygenase 3869802..3871205 Methylobacterium extorquens PA1 5834979 YP_001640947.1 CDS Mext_3491 NC_010172.1 3871211 3871981 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_2544 putative branched-chain amino acid ABC transporter, ATP-binding protein; ABC transporter-like protein 3871211..3871981 Methylobacterium extorquens PA1 5834980 YP_001640948.1 CDS Mext_3492 NC_010172.1 3871992 3872873 D PFAM: inner-membrane translocator; KEGG: bbt:BBta_2545 putative branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator 3871992..3872873 Methylobacterium extorquens PA1 5834981 YP_001640949.1 CDS Mext_3493 NC_010172.1 3872878 3873921 D PFAM: inner-membrane translocator; KEGG: bbt:BBta_2546 putative branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator 3872878..3873921 Methylobacterium extorquens PA1 5834982 YP_001640950.1 CDS Mext_3494 NC_010172.1 3873956 3875329 D KEGG: bbt:BBta_2547 hypothetical protein; hypothetical protein 3873956..3875329 Methylobacterium extorquens PA1 5834983 YP_001640951.1 CDS Mext_3495 NC_010172.1 3875326 3876087 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_2548 high-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding protein); ABC transporter-like protein 3875326..3876087 Methylobacterium extorquens PA1 5831952 YP_001640952.1 CDS Mext_3496 NC_010172.1 3876068 3877381 D PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: xau:Xaut_2768 acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase type 2 3876068..3877381 Methylobacterium extorquens PA1 5831953 YP_001640953.1 CDS Mext_3497 NC_010172.1 3877613 3877828 D hypothetical protein 3877613..3877828 Methylobacterium extorquens PA1 5831954 YP_001640954.1 CDS Mext_3498 NC_010172.1 3877907 3878383 D PFAM: heat shock protein Hsp20; KEGG: nha:Nham_1917 heat shock protein HSP20; heat shock protein Hsp20 3877907..3878383 Methylobacterium extorquens PA1 5831955 YP_001640955.1 CDS Mext_3499 NC_010172.1 3878395 3879255 D KEGG: bra:BRADO3435 putative transcriptional regulatory protein, Crp/Fnr family; CRP/FNR family transcriptional regulator 3878395..3879255 Methylobacterium extorquens PA1 5831956 YP_001640956.1 CDS Mext_3500 NC_010172.1 3879343 3880155 D PFAM: UspA domain protein; KEGG: nwi:Nwi_1035 universal stress protein, UspA; UspA domain-containing protein 3879343..3880155 Methylobacterium extorquens PA1 5831700 YP_001640957.1 CDS Mext_3501 NC_010172.1 3880300 3880749 D KEGG: bja:bll7960 hypothetical protein; hypothetical protein 3880300..3880749 Methylobacterium extorquens PA1 5831701 YP_001640958.1 CDS Mext_3502 NC_010172.1 3880798 3881124 R PFAM: transport-associated; KEGG: sme:SMa1153 hypothetical protein; transport-associated complement(3880798..3881124) Methylobacterium extorquens PA1 5831702 YP_001640959.1 CDS Mext_3503 NC_010172.1 3881157 3881378 R hypothetical protein complement(3881157..3881378) Methylobacterium extorquens PA1 5831703 YP_001640960.1 CDS Mext_3504 NC_010172.1 3881643 3882503 D PFAM: UspA domain protein; KEGG: sme:SMa1158 hypothetical protein; UspA domain-containing protein 3881643..3882503 Methylobacterium extorquens PA1 5833699 YP_001640961.1 CDS Mext_3505 NC_010172.1 3882621 3883310 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rpd:RPD_1340 cyclic nucleotide-binding; regulatory protein Crp complement(3882621..3883310) Methylobacterium extorquens PA1 5833700 YP_001640962.1 CDS Mext_3506 NC_010172.1 3883849 3884457 R PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mlo:mll6606 response regulator FixJ; response regulator receiver complement(3883849..3884457) Methylobacterium extorquens PA1 5833701 YP_001640963.1 CDS Mext_3507 NC_010172.1 3884461 3885999 R KEGG: bja:bll2760 two-component oxygen-sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein complement(3884461..3885999) Methylobacterium extorquens PA1 5833702 YP_001640964.1 CDS Mext_3508 NC_010172.1 3886352 3887212 D PFAM: UspA domain protein; KEGG: xau:Xaut_3179 UspA domain protein; UspA domain-containing protein 3886352..3887212 Methylobacterium extorquens PA1 5833703 YP_001640965.1 CDS Mext_3509 NC_010172.1 3887430 3888485 D PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: azo:azo3686 probable response regulator; metal-dependent phosphohydrolase 3887430..3888485 Methylobacterium extorquens PA1 5831974 YP_001640966.1 CDS Mext_3510 NC_010172.1 3888607 3891405 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: dar:Daro_3350 response regulator receiver:ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal:Hpt; ATPase domain-containing protein complement(3888607..3891405) Methylobacterium extorquens PA1 5831975 YP_001640967.1 CDS Mext_3511 NC_010172.1 3891519 3892940 R KEGG: bbt:BBta_2204 hypothetical protein; hypothetical protein complement(3891519..3892940) Methylobacterium extorquens PA1 5831976 YP_001640968.1 CDS Mext_3512 NC_010172.1 3893139 3893747 R PFAM: TadE family protein; KEGG: pla:Plav_0225 TadE family protein; TadE family protein complement(3893139..3893747) Methylobacterium extorquens PA1 5831977 YP_001640969.1 CDS Mext_3513 NC_010172.1 3893744 3894337 R PFAM: TadE family protein; KEGG: acr:Acry_2979 TadE family protein; TadE family protein complement(3893744..3894337) Methylobacterium extorquens PA1 5831978 YP_001640970.1 CDS Mext_3514 NC_010172.1 3894652 3895773 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: xau:Xaut_0669 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase complement(3894652..3895773) Methylobacterium extorquens PA1 5832365 YP_001640971.1 CDS Mext_3515 NC_010172.1 3896188 3896409 D hypothetical protein 3896188..3896409 Methylobacterium extorquens PA1 5832366 YP_001640972.1 CDS Mext_3516 NC_010172.1 3896758 3897798 D KEGG: acr:Acry_1987 hypothetical protein; hypothetical protein 3896758..3897798 Methylobacterium extorquens PA1 5832367 YP_001640973.1 CDS Mext_3517 NC_010172.1 3897842 3899278 R PFAM: UMUC domain protein DNA-repair protein; KEGG: acr:Acry_3536 UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase complement(3897842..3899278) Methylobacterium extorquens PA1 5832368 YP_001640974.1 CDS Mext_3519 NC_010172.1 3899433 3899633 R KEGG: syf:Synpcc7942_1549 DNA polymerase V; hypothetical protein complement(3899433..3899633) Methylobacterium extorquens PA1 5834492 YP_001640975.1 CDS Mext_3520 NC_010172.1 3900001 3900240 D hypothetical protein 3900001..3900240 Methylobacterium extorquens PA1 5834493 YP_001640976.1 CDS Mext_3522 NC_010172.1 3900660 3901067 D PFAM: helix-turn-helix domain protein; KEGG: mes:Meso_3923 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein 3900660..3901067 Methylobacterium extorquens PA1 5834495 YP_001640977.1 CDS Mext_3523 NC_010172.1 3901322 3902710 R PFAM: Hemolysin-type calcium-binding region; KEGG: rsh:Rsph17029_4185 Na-Ca exchanger/integrin-beta4; hemolysin-type calcium-binding protein complement(3901322..3902710) Methylobacterium extorquens PA1 5834496 YP_001640978.1 CDS Mext_3524 NC_010172.1 3903311 3903529 D hypothetical protein 3903311..3903529 Methylobacterium extorquens PA1 5835295 YP_001640979.1 CDS Mext_3525 NC_010172.1 3903836 3904162 R hypothetical protein complement(3903836..3904162) Methylobacterium extorquens PA1 5835296 YP_001640980.1 CDS Mext_3526 NC_010172.1 3904889 3905812 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bja:blr6181 transcriptional regulatory protein; LysR substrate-binding protein complement(3904889..3905812) Methylobacterium extorquens PA1 5835297 YP_001640981.1 CDS Mext_3527 NC_010172.1 3906421 3906678 D hypothetical protein 3906421..3906678 Methylobacterium extorquens PA1 5835298 YP_001640982.1 CDS Mext_3528 NC_010172.1 3906632 3907207 R PFAM: PAS fold-3 domain protein; KEGG: nmu:Nmul_A2207 multi-sensor hybrid histidine kinase; PAS domain-containing protein complement(3906632..3907207) Methylobacterium extorquens PA1 5835299 YP_001640983.1 CDS Mext_3529 NC_010172.1 3907668 3908351 R hypothetical protein complement(3907668..3908351) Methylobacterium extorquens PA1 5834760 YP_001640984.1 CDS Mext_3530 NC_010172.1 3908818 3909099 D PFAM: transposase IS3/IS911 family protein; KEGG: bbt:BBta_p0209 putative transposase IS3/IS911 family; transposase IS3/IS911 family protein 3908818..3909099 Methylobacterium extorquens PA1 5834761 YP_001640985.1 CDS Mext_3531 NC_010172.1 3909123 3909959 D PFAM: Integrase catalytic region; KEGG: bbt:BBta_p0210 putative insertion element protein; integrase catalytic subunit 3909123..3909959 Methylobacterium extorquens PA1 5834762 YP_001640986.1 CDS Mext_3532 NC_010172.1 3910145 3911074 D PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_3446 ISHne3, transposase; transposase IS116/IS110/IS902 family protein 3910145..3911074 Methylobacterium extorquens PA1 5834763 YP_001640987.1 CDS Mext_3533 NC_010172.1 3911532 3914168 R KEGG: mlo:mlr8545 hypothetical protein; hypothetical protein complement(3911532..3914168) Methylobacterium extorquens PA1 5834764 YP_001640988.1 CDS Mext_3534 NC_010172.1 3914419 3918735 R KEGG: bbr:BB3486 hypothetical protein; hypothetical protein complement(3914419..3918735) Methylobacterium extorquens PA1 5834859 YP_001640989.1 CDS Mext_3535 NC_010172.1 3918740 3919201 R PFAM: NLP/P60 protein; KEGG: bvi:Bcep1808_3223 hypothetical protein; NLP/P60 protein complement(3918740..3919201) Methylobacterium extorquens PA1 5834860 YP_001640990.1 CDS Mext_3536 NC_010172.1 3919254 3919505 D hypothetical protein 3919254..3919505 Methylobacterium extorquens PA1 5834861 YP_001640991.1 CDS Mext_3537 NC_010172.1 3919750 3920112 D hypothetical protein 3919750..3920112 Methylobacterium extorquens PA1 5834862 YP_001640992.1 CDS Mext_3538 NC_010172.1 3920206 3920958 R hypothetical protein complement(3920206..3920958) Methylobacterium extorquens PA1 5834863 YP_001640993.1 CDS Mext_3539 NC_010172.1 3921106 3921513 D KEGG: sme:SMc04265 hypothetical protein; hypothetical protein 3921106..3921513 Methylobacterium extorquens PA1 5831304 YP_001640994.1 CDS Mext_3540 NC_010172.1 3921514 3922005 R PFAM: HNH endonuclease; KEGG: nar:Saro_0644 HNH endonuclease; HNH endonuclease complement(3921514..3922005) Methylobacterium extorquens PA1 5831305 YP_001640995.1 CDS Mext_3541 NC_010172.1 3922577 3922819 D hypothetical protein 3922577..3922819 Methylobacterium extorquens PA1 5831306 YP_001640996.1 CDS Mext_3542 NC_010172.1 3923946 3924140 R hypothetical protein complement(3923946..3924140) Methylobacterium extorquens PA1 5831307 YP_001640997.1 CDS Mext_3543 NC_010172.1 3924222 3924407 D hypothetical protein 3924222..3924407 Methylobacterium extorquens PA1 5831308 YP_001640998.1 CDS Mext_3547 NC_010172.1 3925682 3926008 R PFAM: transposase IS3/IS911 family protein; KEGG: aav:Aave_2936 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(3925682..3926008) Methylobacterium extorquens PA1 5834389 YP_001640999.1 CDS Mext_3548 NC_010172.1 3926184 3926597 D hypothetical protein 3926184..3926597 Methylobacterium extorquens PA1 5834390 YP_001641000.1 CDS Mext_3549 NC_010172.1 3926557 3926802 D hypothetical protein 3926557..3926802 Methylobacterium extorquens PA1 5834391 YP_001641001.1 CDS Mext_3550 NC_010172.1 3926968 3927165 R hypothetical protein complement(3926968..3927165) Methylobacterium extorquens PA1 5834392 YP_001641002.1 CDS Mext_3551 NC_010172.1 3929189 3929344 R KEGG: pna:Pnap_4034 putative transposase of insertion sequence ISRm10-1; putative transposase of insertion sequence ISRm10-1 complement(3929189..3929344) Methylobacterium extorquens PA1 5832971 YP_001641003.1 CDS Mext_3552 NC_010172.1 3929505 3930158 D PFAM: regulatory protein Crp; KEGG: ret:RHE_PF00508 nitrogen fixation transcriptional regulator protein, Fnr/CRP family; regulatory protein Crp 3929505..3930158 Methylobacterium extorquens PA1 5832972 YP_001641004.1 CDS Mext_3553 NC_010172.1 3930205 3931263 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mlo:mll6759 putative nucleotide sugar epimerase; NAD-dependent epimerase/dehydratase 3930205..3931263 Methylobacterium extorquens PA1 5832973 YP_001641005.1 CDS Mext_3554 NC_010172.1 3931329 3933251 D KEGG: ppd:Ppro_2466 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; asparagine synthase 3931329..3933251 Methylobacterium extorquens PA1 5832974 YP_001641006.1 CDS Mext_3555 NC_010172.1 3933318 3934145 R PFAM: protein of unknown function DUF218; KEGG: xau:Xaut_4460 protein of unknown function DUF218; hypothetical protein complement(3933318..3934145) Methylobacterium extorquens PA1 5832975 YP_001641007.1 CDS Mext_3556 NC_010172.1 3934208 3936475 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: mlo:mlr6756 exopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein complement(3934208..3936475) Methylobacterium extorquens PA1 5831102 YP_001641008.1 CDS Mext_3557 NC_010172.1 3936694 3937410 D PFAM: Nucleotidyl transferase; KEGG: mlo:mlr6764 mannose-1-phosphate guanyltransferase; nucleotidyl transferase 3936694..3937410 Methylobacterium extorquens PA1 5831103 YP_001641009.1 CDS Mext_3558 NC_010172.1 3937412 3938596 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mlo:mlr6765 similar to spore coat polysaccharide biosynthesis protein SpsC; DegT/DnrJ/EryC1/StrS aminotransferase 3937412..3938596 Methylobacterium extorquens PA1 5831104 YP_001641010.1 CDS Mext_3559 NC_010172.1 3938644 3939393 D PFAM: sugar transferase; KEGG: mlo:mlr6766 putative transferase; sugar transferase 3938644..3939393 Methylobacterium extorquens PA1 5831105 YP_001641011.1 CDS Mext_3560 NC_010172.1 3939451 3940458 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mlo:mlr6767 probable UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase 3939451..3940458 Methylobacterium extorquens PA1 5831106 YP_001641012.1 CDS Mext_3561 NC_010172.1 3940455 3941780 D PFAM: polysaccharide export protein; KEGG: bja:blr6311 putative exopolysaccharide production protein; polysaccharide export protein 3940455..3941780 Methylobacterium extorquens PA1 5832932 YP_001641013.1 CDS Mext_3562 NC_010172.1 3942142 3942621 R hypothetical protein complement(3942142..3942621) Methylobacterium extorquens PA1 5832933 YP_001641014.1 CDS Mext_3563 NC_010172.1 3942898 3943146 R hypothetical protein complement(3942898..3943146) Methylobacterium extorquens PA1 5832934 YP_001641015.1 CDS Mext_3564 NC_010172.1 3943143 3944312 R PFAM: glycosyl transferase family 2; KEGG: mpt:Mpe_A0604 putative glycosyl transferase; glycosyl transferase family protein complement(3943143..3944312) Methylobacterium extorquens PA1 5832935 YP_001641016.1 CDS Mext_3565 NC_010172.1 3944290 3945462 R PFAM: glycosyl transferase group 1; KEGG: mca:MCA1433 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase complement(3944290..3945462) Methylobacterium extorquens PA1 5832936 YP_001641017.1 CDS Mext_3566 NC_010172.1 3945475 3946644 R PFAM: glycosyl transferase group 1; KEGG: sth:STH2712 putative glycosyl transferase; group 1 glycosyl transferase complement(3945475..3946644) Methylobacterium extorquens PA1 5833095 YP_001641018.1 CDS Mext_3567 NC_010172.1 3946644 3948152 R KEGG: dde:Dde_0836 CapK related-protein; CapK related-protein complement(3946644..3948152) Methylobacterium extorquens PA1 5833096 YP_001641019.1 CDS Mext_3568 NC_010172.1 3948430 3949128 R PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_3089 glycosyl transferase group 1; group 1 glycosyl transferase complement(3948430..3949128) Methylobacterium extorquens PA1 5833097 YP_001641020.1 CDS Mext_3569 NC_010172.1 3949600 3950982 D PFAM: glycosyl transferase group 1; KEGG: pin:Ping_0456 glycosyl transferase, group 1; group 1 glycosyl transferase 3949600..3950982 Methylobacterium extorquens PA1 5833098 YP_001641021.1 CDS Mext_3570 NC_010172.1 3951024 3952442 D PFAM: O-antigen polymerase; KEGG: rxy:Rxyl_1940 O-antigen polymerase; O-antigen polymerase 3951024..3952442 Methylobacterium extorquens PA1 5833099 YP_001641022.1 CDS Mext_3571 NC_010172.1 3952432 3954036 D PFAM: polysaccharide biosynthesis protein; KEGG: mem:Memar_0954 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 3952432..3954036 Methylobacterium extorquens PA1 5831558 YP_001641023.1 CDS Mext_3572 NC_010172.1 3954094 3954264 R hypothetical protein complement(3954094..3954264) Methylobacterium extorquens PA1 5831559 YP_001641024.1 CDS Mext_3574 NC_010172.1 3954525 3955232 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mul:MUL_4678 hypothetical protein; type 11 methyltransferase complement(3954525..3955232) Methylobacterium extorquens PA1 5831561 YP_001641025.1 CDS Mext_3575 NC_010172.1 3955690 3957165 D KEGG: bth:BT_4183 pectate lyase L precursor; pectate lyase L 3955690..3957165 Methylobacterium extorquens PA1 5831562 YP_001641026.1 CDS Mext_3576 NC_010172.1 3957548 3959191 R PFAM: Hemolysin-type calcium-binding region; KEGG: afm:AFUA_3G14890 pectate lyase, putative; hemolysin-type calcium-binding protein complement(3957548..3959191) Methylobacterium extorquens PA1 5833008 YP_001641027.1 CDS Mext_3578 NC_010172.1 3960501 3961262 R PFAM: regulatory protein LuxR; KEGG: bja:blr6291 transcriptional regulatory protein; regulatory protein LuxR complement(3960501..3961262) Methylobacterium extorquens PA1 5833010 YP_001641028.1 CDS Mext_3579 NC_010172.1 3961448 3962089 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mlo:mll6762 two component system response regulator; regulatory protein LuxR complement(3961448..3962089) Methylobacterium extorquens PA1 5833011 YP_001641029.1 CDS Mext_3580 NC_010172.1 3962484 3962855 R KEGG: rpb:RPB_1542 acyltransferase 3; hypothetical protein complement(3962484..3962855) Methylobacterium extorquens PA1 5833012 YP_001641030.1 CDS Mext_3581 NC_010172.1 3963195 3964049 R PFAM: domain of unknown function DUF1738; KEGG: xau:Xaut_3034 domain of unknown function DUF1738; hypothetical protein complement(3963195..3964049) Methylobacterium extorquens PA1 5833508 YP_001641031.1 CDS Mext_3582 NC_010172.1 3964677 3965156 R hypothetical protein complement(3964677..3965156) Methylobacterium extorquens PA1 5833509 YP_001641032.1 CDS Mext_3583 NC_010172.1 3965777 3966172 D hypothetical protein 3965777..3966172 Methylobacterium extorquens PA1 5833511 YP_001641033.1 CDS Mext_3584 NC_010172.1 3966959 3967519 D hypothetical protein 3966959..3967519 Methylobacterium extorquens PA1 5831402 YP_001641034.1 CDS Mext_3585 NC_010172.1 3967614 3968675 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pmu:PM1075 unknown; endonuclease/exonuclease/phosphatase complement(3967614..3968675) Methylobacterium extorquens PA1 5831403 YP_001641035.1 CDS Mext_3586 NC_010172.1 3968805 3969458 R PFAM: protein of unknown function DUF159; KEGG: xau:Xaut_3740 protein of unknown function DUF159; hypothetical protein complement(3968805..3969458) Methylobacterium extorquens PA1 5831404 YP_001641036.1 CDS Mext_3587 NC_010172.1 3969588 3970361 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: xau:Xaut_3409 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(3969588..3970361) Methylobacterium extorquens PA1 5831405 YP_001641037.1 CDS Mext_3588 NC_010172.1 3970679 3971041 D hypothetical protein 3970679..3971041 Methylobacterium extorquens PA1 5831587 YP_001641038.1 CDS Mext_3589 NC_010172.1 3971146 3971391 D hypothetical protein 3971146..3971391 Methylobacterium extorquens PA1 5831588 YP_001641039.1 CDS Mext_3590 NC_010172.1 3971700 3971957 D hypothetical protein 3971700..3971957 Methylobacterium extorquens PA1 5831589 YP_001641040.1 CDS Mext_3591 NC_010172.1 3972123 3972713 D hypothetical protein 3972123..3972713 Methylobacterium extorquens PA1 5831590 YP_001641041.1 CDS Mext_3592 NC_010172.1 3973039 3973464 D KEGG: pfl:PFL_0702 lipoprotein, putative; hypothetical protein 3973039..3973464 Methylobacterium extorquens PA1 5831591 YP_001641042.1 CDS Mext_3593 NC_010172.1 3973632 3973823 R hypothetical protein complement(3973632..3973823) Methylobacterium extorquens PA1 5832544 YP_001641043.1 CDS Mext_3594 NC_010172.1 3973958 3974203 D hypothetical protein 3973958..3974203 Methylobacterium extorquens PA1 5832545 YP_001641044.1 CDS Mext_3595 NC_010172.1 3974560 3974868 R hypothetical protein complement(3974560..3974868) Methylobacterium extorquens PA1 5832546 YP_001641045.1 CDS Mext_3596 NC_010172.1 3974938 3975438 R Transcriptional regulator that represses the manganese transporter MntH when manganese is present; manganese transport regulator MntR complement(3974938..3975438) Methylobacterium extorquens PA1 5832547 YP_001641046.1 CDS Mext_3597 NC_010172.1 3975788 3977143 D TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: xcb:XC_1947 manganese transport protein; Mn2+/Fe2+ transporter 3975788..3977143 Methylobacterium extorquens PA1 5832548 YP_001641047.1 CDS Mext_3598 NC_010172.1 3977156 3978049 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS05312 probable transcription regulator protein; LysR substrate-binding protein complement(3977156..3978049) Methylobacterium extorquens PA1 5833611 YP_001641048.1 CDS Mext_3599 NC_010172.1 3978224 3979549 D PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: esa:ESA_04130 hypothetical protein; sodium/sulfate symporter 3978224..3979549 Methylobacterium extorquens PA1 5833612 YP_001641049.1 CDS Mext_3600 NC_010172.1 3979677 3980078 D TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: nwi:Nwi_2798 succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, cytochrome b556 subunit 3979677..3980078 Methylobacterium extorquens PA1 5833613 YP_001641050.1 CDS Mext_3601 NC_010172.1 3980087 3980506 D TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: xau:Xaut_1966 succinate dehydrogenase hydrophobic membrane anchor; succinate dehydrogenase, hydrophobic membrane anchor protein 3980087..3980506 Methylobacterium extorquens PA1 5833614 YP_001641051.1 CDS sdhA NC_010172.1 3980536 3982353 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 3980536..3982353 Methylobacterium extorquens PA1 5833615 YP_001641052.1 CDS Mext_3603 NC_010172.1 3982398 3982958 D hypothetical protein 3982398..3982958 Methylobacterium extorquens PA1 5831957 YP_001641053.1 CDS Mext_3604 NC_010172.1 3983015 3983839 D KEGG: atc:AGR_C_4790 succinate dehydrogenase iron-sulfur protein subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; succinate dehydrogenase and fumarate reductase iron-sulfur protein 3983015..3983839 Methylobacterium extorquens PA1 5831958 YP_001641054.1 CDS Mext_3605 NC_010172.1 3984083 3984643 D KEGG: mes:Meso_3393 outer membrane lipoprotein omp19; outer membrane lipoprotein omp19 3984083..3984643 Methylobacterium extorquens PA1 5831959 YP_001641055.1 CDS Mext_3606 NC_010172.1 3984648 3986588 R KEGG: bja:bll7745 hypothetical protein; hypothetical protein complement(3984648..3986588) Methylobacterium extorquens PA1 5831960 YP_001641056.1 CDS Mext_3607 NC_010172.1 3986671 3987693 D KEGG: mes:Meso_2737 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein 3986671..3987693 Methylobacterium extorquens PA1 5831961 YP_001641057.1 CDS Mext_3608 NC_010172.1 3989805 3990137 D hypothetical protein 3989805..3990137 Methylobacterium extorquens PA1 5832699 YP_001641058.1 CDS Mext_3609 NC_010172.1 3990301 3990744 R PFAM: protein of unknown function DUF606; KEGG: pen:PSEEN0988 hypothetical protein; hypothetical protein complement(3990301..3990744) Methylobacterium extorquens PA1 5832700 YP_001641059.1 CDS Mext_3610 NC_010172.1 3991177 3991941 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pla:Plav_0639 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 3991177..3991941 Methylobacterium extorquens PA1 5832701 YP_001641060.1 CDS Mext_3611 NC_010172.1 3991938 3992801 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gvi:glr2355 probable oxidoreductase; short-chain dehydrogenase/reductase SDR 3991938..3992801 Methylobacterium extorquens PA1 5832702 YP_001641061.1 CDS Mext_3612 NC_010172.1 3992798 3993667 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_0020 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3992798..3993667 Methylobacterium extorquens PA1 5832703 YP_001641062.1 CDS Mext_3613 NC_010172.1 3993693 3994697 D TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: rpa:RPA4441 putative magnesium/cobalt transport protein; magnesium and cobalt transport protein CorA 3993693..3994697 Methylobacterium extorquens PA1 5835697 YP_001641063.1 CDS Mext_3614 NC_010172.1 3994909 3995451 D PFAM: protein of unknown function DUF892; KEGG: gbe:GbCGDNIH1_0093 protein YciF; hypothetical protein 3994909..3995451 Methylobacterium extorquens PA1 5835698 YP_001641064.1 CDS Mext_3615 NC_010172.1 3995889 3996626 D KEGG: ilo:IL2343 methyl-accepting chemotaxis protein (contains HAMP domain); hypothetical protein 3995889..3996626 Methylobacterium extorquens PA1 5835699 YP_001641065.1 CDS Mext_3616 NC_010172.1 3996667 3997584 D PFAM: chemotaxis sensory transducer; KEGG: bbt:BBta_0969 putative methyl-accepting chemotaxis protein; chemotaxis sensory transducer protein 3996667..3997584 Methylobacterium extorquens PA1 5835700 YP_001641066.1 CDS Mext_3617 NC_010172.1 3997686 3997967 R KEGG: bra:BRADO6018 conserved hypothetical protein; putative signal peptide; hypothetical protein complement(3997686..3997967) Methylobacterium extorquens PA1 5835701 YP_001641067.1 CDS Mext_3618 NC_010172.1 3998652 3998900 D hypothetical protein 3998652..3998900 Methylobacterium extorquens PA1 5834090 YP_001641068.1 CDS Mext_3619 NC_010172.1 3999091 3999342 R KEGG: rpe:RPE_1591 hypothetical protein; hypothetical protein complement(3999091..3999342) Methylobacterium extorquens PA1 5834091 YP_001641069.1 CDS Mext_3620 NC_010172.1 3999648 4000052 R PFAM: 4-oxalocrotonate tautomerase; KEGG: atc:AGR_L_1698 hypothetical protein; 4-oxalocrotonate tautomerase complement(3999648..4000052) Methylobacterium extorquens PA1 5834092 YP_001641070.1 CDS Mext_3621 NC_010172.1 4000151 4000999 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: atc:AGR_L_1696 hypothetical protein; regulatory protein LysR 4000151..4000999 Methylobacterium extorquens PA1 5834093 YP_001641071.1 CDS Mext_3622 NC_010172.1 4001499 4003553 D TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: bra:BRADO0236 putative sensor histidine kinase with a response regulator receiver domain; PAS sensor protein 4001499..4003553 Methylobacterium extorquens PA1 5834094 YP_001641072.1 CDS Mext_3623 NC_010172.1 4003707 4004288 D PFAM: regulatory protein TetR; KEGG: gbe:GbCGDNIH1_1777 transcriptional regulator, TetR family; regulatory protein TetR 4003707..4004288 Methylobacterium extorquens PA1 5834155 YP_001641073.1 CDS Mext_3624 NC_010172.1 4004399 4004905 D hypothetical protein 4004399..4004905 Methylobacterium extorquens PA1 5834156 YP_001641074.1 CDS Mext_3625 NC_010172.1 4004971 4005687 D KEGG: eli:ELI_11695 endonuclease III; PFAM: HhH-GPD family protein; SMART: iron-sulfur cluster loop; DNA-(apurinic or apyrimidinic site) lyase 4004971..4005687 Methylobacterium extorquens PA1 5834157 YP_001641075.1 CDS Mext_3626 NC_010172.1 4005796 4006716 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr1253 dehydrogenase; short-chain dehydrogenase/reductase SDR complement(4005796..4006716) Methylobacterium extorquens PA1 5834158 YP_001641076.1 CDS Mext_3627 NC_010172.1 4006840 4007412 D PFAM: beta-Ig-H3/fasciclin; KEGG: xom:XOO_0610 hypothetical protein; beta-Ig-H3/fasciclin 4006840..4007412 Methylobacterium extorquens PA1 5834159 YP_001641077.1 CDS Mext_3628 NC_010172.1 4007659 4008495 D PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_C6920 alpha/beta hydrolase; alpha/beta hydrolase fold protein 4007659..4008495 Methylobacterium extorquens PA1 5834133 YP_001641078.1 CDS Mext_3629 NC_010172.1 4008629 4009426 D PFAM: GAF domain protein; KEGG: swi:Swit_4430 GAF sensor hybrid histidine kinase; GAF domain-containing protein 4008629..4009426 Methylobacterium extorquens PA1 5834134 YP_001641079.1 CDS Mext_3630 NC_010172.1 4009487 4009705 D hypothetical protein 4009487..4009705 Methylobacterium extorquens PA1 5834135 YP_001641080.1 CDS Mext_3631 NC_010172.1 4009947 4010180 D KEGG: bbt:BBta_7551 hypothetical protein; hypothetical protein 4009947..4010180 Methylobacterium extorquens PA1 5834136 YP_001641081.1 CDS Mext_3632 NC_010172.1 4010186 4010434 D KEGG: bbt:BBta_4359 hypothetical protein; hypothetical protein 4010186..4010434 Methylobacterium extorquens PA1 5834137 YP_001641082.1 CDS Mext_3633 NC_010172.1 4010511 4011245 D TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll1464 molybdenum transport protein modB; molybdate ABC transporter inner membrane subunit 4010511..4011245 Methylobacterium extorquens PA1 5834448 YP_001641083.1 CDS Mext_3634 NC_010172.1 4012016 4012672 R PFAM: Glutathione S-transferase domain; KEGG: rpb:RPB_0021 glutathione S-transferase-like; glutathione S-transferase domain-containing protein complement(4012016..4012672) Methylobacterium extorquens PA1 5834449 YP_001641084.1 CDS Mext_3635 NC_010172.1 4012936 4014030 D KEGG: mlo:mll1463 molybdenum transport protein modC; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; molybdate ABC transporter ATPase 4012936..4014030 Methylobacterium extorquens PA1 5834450 YP_001641085.1 CDS Mext_3636 NC_010172.1 4014051 4014416 R hypothetical protein complement(4014051..4014416) Methylobacterium extorquens PA1 5834451 YP_001641086.1 CDS Mext_3637 NC_010172.1 4014595 4015299 D KEGG: atc:AGR_L_1193 hypothetical protein; hypothetical protein 4014595..4015299 Methylobacterium extorquens PA1 5834452 YP_001641087.1 CDS Mext_3638 NC_010172.1 4015324 4016373 D KEGG: bbt:BBta_3827 4-hydroxythreonine-4-phosphate dehydrogenase (4-(phosphohydroxy)-L-threonine dehydrogenase); TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 4015324..4016373 Methylobacterium extorquens PA1 5834570 YP_001641088.1 CDS ksgA NC_010172.1 4016382 4017272 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 4016382..4017272 Methylobacterium extorquens PA1 5834571 YP_001641089.1 CDS Mext_3640 NC_010172.1 4017920 4018966 R KEGG: maq:Maqu_0017 secretion protein HlyD family protein; hypothetical protein complement(4017920..4018966) Methylobacterium extorquens PA1 5834572 YP_001641090.1 CDS Mext_3641 NC_010172.1 4018963 4020234 R PFAM: glycosyl transferase family 2; chitin synthase; KEGG: vpa:VPA0393 hypothetical protein; glycosyl transferase family protein complement(4018963..4020234) Methylobacterium extorquens PA1 5834573 YP_001641091.1 CDS Mext_3642 NC_010172.1 4020751 4021890 R PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_5011 putative alpha/beta hydrolase; alpha/beta hydrolase fold protein complement(4020751..4021890) Methylobacterium extorquens PA1 5834574 YP_001641092.1 CDS Mext_3643 NC_010172.1 4022090 4023595 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sme:SMb20070 putative sulfate permease protein; sulfate transporter complement(4022090..4023595) Methylobacterium extorquens PA1 5834070 YP_001641093.1 CDS Mext_3644 NC_010172.1 4023774 4024490 R PFAM: LrgB family protein; KEGG: rpb:RPB_0492 LrgB-like protein; LrgB family protein complement(4023774..4024490) Methylobacterium extorquens PA1 5834071 YP_001641094.1 CDS Mext_3645 NC_010172.1 4024487 4024873 R PFAM: LrgA family protein; KEGG: bja:blr1347 hypothetical protein; LrgA family protein complement(4024487..4024873) Methylobacterium extorquens PA1 5834072 YP_001641095.1 CDS Mext_3646 NC_010172.1 4025012 4025662 R PFAM: protein of unknown function DUF1332; KEGG: mlo:mll4217 hypothetical protein; hypothetical protein complement(4025012..4025662) Methylobacterium extorquens PA1 5834073 YP_001641096.1 CDS Mext_3647 NC_010172.1 4025756 4026484 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: acr:Acry_2045 methyltransferase type 11; type 11 methyltransferase complement(4025756..4026484) Methylobacterium extorquens PA1 5834074 YP_001641097.1 CDS Mext_3648 NC_010172.1 4026512 4029142 R PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: rpc:RPC_2311 organic solvent tolerance protein; organic solvent tolerance protein complement(4026512..4029142) Methylobacterium extorquens PA1 5832816 YP_001641098.1 CDS Mext_3649 NC_010172.1 4029191 4030279 R PFAM: permease YjgP/YjgQ family protein; KEGG: xau:Xaut_2837 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease complement(4029191..4030279) Methylobacterium extorquens PA1 5832817 YP_001641099.1 CDS Mext_3650 NC_010172.1 4030290 4031459 R PFAM: permease YjgP/YjgQ family protein; KEGG: nwi:Nwi_1677 permease YjgP/YjgQ; YjgP/YjgQ family permease complement(4030290..4031459) Methylobacterium extorquens PA1 5832818 YP_001641100.1 CDS Mext_3651 NC_010172.1 4031751 4033244 D PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: nwi:Nwi_1676 leucyl aminopeptidase; leucyl aminopeptidase 4031751..4033244 Methylobacterium extorquens PA1 5832819 YP_001641101.1 CDS Mext_3652 NC_010172.1 4033241 4034044 D hypothetical protein 4033241..4034044 Methylobacterium extorquens PA1 5832820 YP_001641102.1 CDS Mext_3653 NC_010172.1 4034144 4035880 D PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll1319 acyl-CoA synthase; AMP-dependent synthetase and ligase 4034144..4035880 Methylobacterium extorquens PA1 5832295 YP_001641103.1 CDS Mext_3654 NC_010172.1 4036358 4037539 D PFAM: MscS Mechanosensitive ion channel; KEGG: pla:Plav_2855 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 4036358..4037539 Methylobacterium extorquens PA1 5832296 YP_001641104.1 CDS Mext_3655 NC_010172.1 4037606 4038385 R PFAM: DSBA oxidoreductase; KEGG: xau:Xaut_3499 DsbA oxidoreductase; DSBA oxidoreductase complement(4037606..4038385) Methylobacterium extorquens PA1 5832297 YP_001641105.1 CDS Mext_3656 NC_010172.1 4038698 4039741 D KEGG: rpd:RPD_3546 uncharacterized domain HDIG; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phophohydrolase 4038698..4039741 Methylobacterium extorquens PA1 5832298 YP_001641106.1 CDS Mext_3657 NC_010172.1 4039840 4041180 D PFAM: phosphate-selective porin O and P; KEGG: noc:Noc_2418 phosphate-selective porin O and P; phosphate-selective porin O and P 4039840..4041180 Methylobacterium extorquens PA1 5832299 YP_001641107.1 CDS Mext_3658 NC_010172.1 4041259 4042422 D PFAM: aminotransferase class I and II; KEGG: rpa:RPA2446 putative aminotransferase; class I and II aminotransferase 4041259..4042422 Methylobacterium extorquens PA1 5832869 YP_001641108.1 CDS Mext_3659 NC_010172.1 4042615 4045764 R TIGRFAM: ribonuclease, Rne/Rng family; KEGG: xau:Xaut_4668 ribonuclease, Rne/Rng family; ribonuclease complement(4042615..4045764) Methylobacterium extorquens PA1 5832870 YP_001641109.1 CDS Mext_3660 NC_010172.1 4046410 4046616 D hypothetical protein 4046410..4046616 Methylobacterium extorquens PA1 5832871 YP_001641110.1 CDS Mext_3661 NC_010172.1 4046807 4048117 D PFAM: cell wall hydrolase/autolysin; KEGG: rpe:RPE_2978 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 4046807..4048117 Methylobacterium extorquens PA1 5832872 YP_001641111.1 CDS Mext_3662 NC_010172.1 4048178 4050679 D KEGG: rpa:RPA2452 putative penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; 1A family penicillin-binding protein 4048178..4050679 Methylobacterium extorquens PA1 5832873 YP_001641112.1 CDS Mext_3663 NC_010172.1 4050971 4052083 D PFAM: luciferase family protein; KEGG: atc:AGR_pAT_784 hypothetical protein; alkanesulfonate monooxygenase 4050971..4052083 Methylobacterium extorquens PA1 5832093 YP_001641113.1 CDS Mext_3664 NC_010172.1 4052270 4053529 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mlo:mlr5225 dibenzothiophene desulfurization enzyme; acyl-CoA dehydrogenase type 2 4052270..4053529 Methylobacterium extorquens PA1 5832094 YP_001641114.1 CDS Mext_3665 NC_010172.1 4053688 4054338 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: sme:SMb21337 putative iron-sulfur-binding protein, probably subunit of an oxidoreductase like aldehyde oxidase or xanthine dehydrogenase; 2Fe-2S iron-sulfur cluster binding domain-containing protein 4053688..4054338 Methylobacterium extorquens PA1 5832095 YP_001641115.1 CDS Mext_3666 NC_010172.1 4054352 4055326 D PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: xac:XAC2894 oxidoreductase; FAD-binding molybdopterin dehydrogenase 4054352..4055326 Methylobacterium extorquens PA1 5832096 YP_001641116.1 CDS Mext_3667 NC_010172.1 4055338 4057575 D PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: smd:Smed_4735 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 4055338..4057575 Methylobacterium extorquens PA1 5832097 YP_001641117.1 CDS Mext_3668 NC_010172.1 4057703 4057957 D hypothetical protein 4057703..4057957 Methylobacterium extorquens PA1 5833076 YP_001641118.1 CDS Mext_3669 NC_010172.1 4058067 4059407 D PFAM: Xanthine/uracil/vitamin C permease; KEGG: reu:Reut_B5339 xanthine/uracil/vitamin C permease:sulphate transporter; xanthine/uracil/vitamin C permease 4058067..4059407 Methylobacterium extorquens PA1 5833077 YP_001641119.1 CDS Mext_3670 NC_010172.1 4059734 4060765 R PFAM: luciferase family protein; KEGG: bja:bll1244 flavin dependant oxidoreductase; luciferase family protein complement(4059734..4060765) Methylobacterium extorquens PA1 5833078 YP_001641120.1 CDS Mext_3671 NC_010172.1 4061350 4061574 D hypothetical protein 4061350..4061574 Methylobacterium extorquens PA1 5833079 YP_001641121.1 CDS Mext_3672 NC_010172.1 4061916 4062371 D KEGG: mxa:MXAN_6138 RibD domain protein; riboflavin biosynthesis protein RibD domain-containing protein 4061916..4062371 Methylobacterium extorquens PA1 5833080 YP_001641122.1 CDS Mext_3673 NC_010172.1 4062528 4063709 R KEGG: wsu:WS1052 hypothetical protein; DHH superfamily phosphohydrolase complement(4062528..4063709) Methylobacterium extorquens PA1 5833129 YP_001641123.1 CDS mdoG NC_010172.1 4064087 4065757 D involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 4064087..4065757 Methylobacterium extorquens PA1 5833130 YP_001641124.1 CDS Mext_3675 NC_010172.1 4065809 4067983 D necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 4065809..4067983 Methylobacterium extorquens PA1 5833131 YP_001641125.1 CDS Mext_3676 NC_010172.1 4068378 4068494 R KEGG: swi:Swit_5097 integrase, catalytic region; integrase catalytic subunit complement(4068378..4068494) Methylobacterium extorquens PA1 5833133 YP_001641126.1 CDS Mext_3679 NC_010172.1 4070017 4070277 R KEGG: gbe:GbCGDNIH1_1045 transposase; transposase complement(4070017..4070277) Methylobacterium extorquens PA1 5835140 YP_001641127.1 CDS Mext_3680 NC_010172.1 4070486 4070782 R KEGG: gox:GOX2659 transposase; transposase complement(4070486..4070782) Methylobacterium extorquens PA1 5835141 YP_001641128.1 CDS Mext_3681 NC_010172.1 4070948 4072249 R KEGG: xau:Xaut_3551 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase complement(4070948..4072249) Methylobacterium extorquens PA1 5835142 YP_001641129.1 CDS Mext_3682 NC_010172.1 4072498 4073337 R TIGRFAM: methyltransferase FkbM family; KEGG: mag:amb2566 SAM-dependent methyltransferase; FkbM family methyltransferase complement(4072498..4073337) Methylobacterium extorquens PA1 5832469 YP_001641130.1 CDS Mext_3683 NC_010172.1 4073400 4074458 R KEGG: gox:GOX0592 hypothetical protein; hypothetical protein complement(4073400..4074458) Methylobacterium extorquens PA1 5832470 YP_001641131.1 CDS Mext_3684 NC_010172.1 4074451 4078653 R PFAM: glycosyl transferase group 1; KEGG: gox:GOX0595 putative glycosyltransferase; group 1 glycosyl transferase complement(4074451..4078653) Methylobacterium extorquens PA1 5832471 YP_001641132.1 CDS Mext_3685 NC_010172.1 4080083 4080667 D KEGG: ana:alr4488 hypothetical protein; hypothetical protein 4080083..4080667 Methylobacterium extorquens PA1 5832472 YP_001641133.1 CDS Mext_3686 NC_010172.1 4080793 4081722 R PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_3446 ISHne3, transposase; transposase IS116/IS110/IS902 family protein complement(4080793..4081722) Methylobacterium extorquens PA1 5832473 YP_001641134.1 CDS Mext_3687 NC_010172.1 4082314 4083684 R KEGG: xcv:XCV4203 filamentous hemagglutinin-related protein; hypothetical protein complement(4082314..4083684) Methylobacterium extorquens PA1 5831532 YP_001641135.1 CDS Mext_3688 NC_010172.1 4084294 4084764 D KEGG: smd:Smed_6477 feruloyl esterase; hypothetical protein 4084294..4084764 Methylobacterium extorquens PA1 5831533 YP_001641136.1 CDS Mext_3689 NC_010172.1 4084781 4084942 R KEGG: rpb:RPB_2154 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 complement(4084781..4084942) Methylobacterium extorquens PA1 5831534 YP_001641137.1 CDS Mext_3690 NC_010172.1 4085390 4085941 D KEGG: rru:Rru_B0038 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 4085390..4085941 Methylobacterium extorquens PA1 5831535 YP_001641138.1 CDS Mext_3691 NC_010172.1 4086075 4087133 D TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ret:RHE_CH01514 dTDP-glucose-4,6-dehydratase protein; dTDP-glucose 4,6-dehydratase 4086075..4087133 Methylobacterium extorquens PA1 5831536 YP_001641139.1 CDS Mext_3692 NC_010172.1 4087136 4088026 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ccr:CC_1140 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 4087136..4088026 Methylobacterium extorquens PA1 5831602 YP_001641140.1 CDS Mext_3693 NC_010172.1 4088043 4088912 D TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mmw:Mmwyl1_0838 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 4088043..4088912 Methylobacterium extorquens PA1 5831603 YP_001641141.1 CDS Mext_3694 NC_010172.1 4088925 4091675 D KEGG: sye:Syncc9902_0633 lipopolysaccharide biosynthesis protein-like; lipopolysaccharide biosynthesis protein-like protein 4088925..4091675 Methylobacterium extorquens PA1 5831604 YP_001641142.1 CDS Mext_3695 NC_010172.1 4091877 4092623 D KEGG: gbe:GbCGDNIH1_0062 hypothetical cytosolic protein; hypothetical protein 4091877..4092623 Methylobacterium extorquens PA1 5831605 YP_001641143.1 CDS Mext_3696 NC_010172.1 4092658 4092852 R KEGG: sfu:Sfum_3763 putative transposase; hypothetical protein complement(4092658..4092852) Methylobacterium extorquens PA1 5831606 YP_001641144.1 CDS Mext_3697 NC_010172.1 4092883 4093449 R KEGG: smd:Smed_6258 transposase and inactivated derivatives-like protein; transposase and inactivated derivatives-like protein complement(4092883..4093449) Methylobacterium extorquens PA1 5833784 YP_001641145.1 CDS Mext_3698 NC_010172.1 4093446 4093853 R KEGG: ret:RHE_PA00059 probable insertion sequence transposase protein; putative insertion sequence transposase protein complement(4093446..4093853) Methylobacterium extorquens PA1 5833785 YP_001641146.1 CDS Mext_3699 NC_010172.1 4093858 4094058 R hypothetical protein complement(4093858..4094058) Methylobacterium extorquens PA1 5833786 YP_001641147.1 CDS Mext_3700 NC_010172.1 4094294 4095655 R hypothetical protein complement(4094294..4095655) Methylobacterium extorquens PA1 5833787 YP_001641148.1 CDS Mext_3701 NC_010172.1 4095660 4095881 R hypothetical protein complement(4095660..4095881) Methylobacterium extorquens PA1 5833788 YP_001641149.1 CDS Mext_3702 NC_010172.1 4096677 4097321 D KEGG: bbt:BBta_1221 hypothetical protein; hypothetical protein 4096677..4097321 Methylobacterium extorquens PA1 5833709 YP_001641150.1 CDS Mext_3703 NC_010172.1 4097425 4097760 D KEGG: pla:Plav_0324 hypothetical protein; hypothetical protein 4097425..4097760 Methylobacterium extorquens PA1 5833710 YP_001641151.1 CDS Mext_3704 NC_010172.1 4098845 4099216 D hypothetical protein 4098845..4099216 Methylobacterium extorquens PA1 5833711 YP_001641152.1 CDS Mext_3705 NC_010172.1 4099499 4101073 R PFAM: glycosyl transferase family 2; KEGG: rbe:RBE_0706 glycosyltransferase; glycosyl transferase family protein complement(4099499..4101073) Methylobacterium extorquens PA1 5833712 YP_001641153.1 CDS Mext_3706 NC_010172.1 4101081 4101482 R hypothetical protein complement(4101081..4101482) Methylobacterium extorquens PA1 5833713 YP_001641154.1 CDS Mext_3708 NC_010172.1 4102269 4102970 R KEGG: chu:CHU_0859 acetyltransferase with hexapeptide repeat; acetyltransferase complement(4102269..4102970) Methylobacterium extorquens PA1 5833198 YP_001641155.1 CDS Mext_3709 NC_010172.1 4105110 4105877 D KEGG: nar:Saro_0724 glycosyl transferase, family 2; hypothetical protein 4105110..4105877 Methylobacterium extorquens PA1 5833199 YP_001641156.1 CDS Mext_3710 NC_010172.1 4106000 4107199 D PFAM: glycosyl transferase group 1; KEGG: fjo:Fjoh_0312 glycosyl transferase, group 1; group 1 glycosyl transferase 4106000..4107199 Methylobacterium extorquens PA1 5833200 YP_001641157.1 CDS Mext_3711 NC_010172.1 4107354 4109468 D KEGG: rty:RT0327 possible glycosyltransferase; hypothetical protein 4107354..4109468 Methylobacterium extorquens PA1 5833201 YP_001641158.1 CDS Mext_3712 NC_010172.1 4109686 4110921 D TIGRFAM: methyltransferase FkbM family; KEGG: mag:amb2566 SAM-dependent methyltransferase; FkbM family methyltransferase 4109686..4110921 Methylobacterium extorquens PA1 5833202 YP_001641159.1 CDS Mext_3713 NC_010172.1 4111379 4112020 D PFAM: Glutathione S-transferase domain; KEGG: rru:Rru_A3271 glutathione S-transferase family protein; glutathione S-transferase domain-containing protein 4111379..4112020 Methylobacterium extorquens PA1 5831415 YP_001641160.1 CDS Mext_3714 NC_010172.1 4112025 4112900 D PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rpd:RPD_0747 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 4112025..4112900 Methylobacterium extorquens PA1 5831416 YP_001641161.1 CDS Mext_3715 NC_010172.1 4112900 4113934 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; Polysaccharide biosynthesis domain protein; KEGG: har:HEAR1147 putative UDP-glucose 4-epimerase; polysaccharide biosynthesis protein CapD 4112900..4113934 Methylobacterium extorquens PA1 5831417 YP_001641162.1 CDS Mext_3716 NC_010172.1 4113957 4115093 D PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: pmy:Pmen_1873 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 4113957..4115093 Methylobacterium extorquens PA1 5831418 YP_001641163.1 CDS Mext_3718 NC_010172.1 4116051 4116308 D KEGG: ccr:CC_0423 hypothetical protein; hypothetical protein 4116051..4116308 Methylobacterium extorquens PA1 5831024 YP_001641164.1 CDS Mext_3719 NC_010172.1 4117092 4117619 D KEGG: maq:Maqu_2649 fibronectin, type III domain protein; hypothetical protein 4117092..4117619 Methylobacterium extorquens PA1 5831025 YP_001641165.1 CDS Mext_3720 NC_010172.1 4117659 4117880 R hypothetical protein complement(4117659..4117880) Methylobacterium extorquens PA1 5831026 YP_001641166.1 CDS Mext_3721 NC_010172.1 4118414 4120249 R catalyzes the hydrolysis of allophanate; allophanate hydrolase complement(4118414..4120249) Methylobacterium extorquens PA1 5831027 YP_001641167.1 CDS Mext_3722 NC_010172.1 4120561 4124091 R KEGG: xau:Xaut_1222 UreA carboxylase; TIGRFAM: urea amidolyase related protein; urea carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; SMART: Allophanate hydrolase subunit 1; urea carboxylase complement(4120561..4124091) Methylobacterium extorquens PA1 5831028 YP_001641168.1 CDS Mext_3723 NC_010172.1 4124096 4124716 R KEGG: ret:RHE_PE00119 hypothetical protein; hypothetical protein complement(4124096..4124716) Methylobacterium extorquens PA1 5831157 YP_001641169.1 CDS Mext_3724 NC_010172.1 4124731 4125543 R KEGG: xau:Xaut_1224 hypothetical protein; hypothetical protein complement(4124731..4125543) Methylobacterium extorquens PA1 5831158 YP_001641170.1 CDS Mext_3725 NC_010172.1 4125773 4126144 R PFAM: protein of unknown function DUF861 cupin_3; KEGG: bur:Bcep18194_C7526 protein of unknown function DUF861; hypothetical protein complement(4125773..4126144) Methylobacterium extorquens PA1 5831159 YP_001641171.1 CDS Mext_3726 NC_010172.1 4126157 4127530 R TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region; KEGG: dar:Daro_0077 glutamine synthetase, catalytic region; glutamine synthetase complement(4126157..4127530) Methylobacterium extorquens PA1 5831160 YP_001641172.1 CDS Mext_3727 NC_010172.1 4127532 4128332 R PFAM: Creatininase; KEGG: dar:Daro_0078 creatininase; creatininase complement(4127532..4128332) Methylobacterium extorquens PA1 5831161 YP_001641173.1 CDS Mext_3728 NC_010172.1 4128329 4129279 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1387 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit; ABC transporter-like protein complement(4128329..4129279) Methylobacterium extorquens PA1 5832629 YP_001641174.1 CDS Mext_3729 NC_010172.1 4129276 4130337 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_5921 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(4129276..4130337) Methylobacterium extorquens PA1 5832630 YP_001641175.1 CDS Mext_3730 NC_010172.1 4130348 4131358 R KEGG: mfa:Mfla_1859 ABC transport system substrate-binding protein; ABC transporter substrate-binding protein complement(4130348..4131358) Methylobacterium extorquens PA1 5832631 YP_001641176.1 CDS Mext_3731 NC_010172.1 4132360 4133688 D KEGG: aeh:Mlg_0732 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; glycine betaine/L-proline ABC transporter ATPase 4132360..4133688 Methylobacterium extorquens PA1 5832632 YP_001641177.1 CDS Mext_3732 NC_010172.1 4133604 4134455 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aeh:Mlg_0733 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4133604..4134455 Methylobacterium extorquens PA1 5832633 YP_001641178.1 CDS Mext_3733 NC_010172.1 4134641 4135477 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: csa:Csal_3102 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein 4134641..4135477 Methylobacterium extorquens PA1 5833314 YP_001641179.1 CDS Mext_3734 NC_010172.1 4135609 4136907 D KEGG: acb:A1S_1441 putative signal peptide; putative signal peptide 4135609..4136907 Methylobacterium extorquens PA1 5833315 YP_001641180.1 CDS Mext_3735 NC_010172.1 4137101 4138132 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: rsh:Rsph17029_1567 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein complement(4137101..4138132) Methylobacterium extorquens PA1 5833316 YP_001641181.1 CDS Mext_3736 NC_010172.1 4138569 4139822 D TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: xau:Xaut_0869 sarcosine oxidase, beta subunit family; sarcosine oxidase subunit beta 4138569..4139822 Methylobacterium extorquens PA1 5833317 YP_001641182.1 CDS Mext_3737 NC_010172.1 4139842 4140138 D TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: xau:Xaut_0868 sarcosine oxidase, delta subunit family; sarcosine oxidase subunit delta 4139842..4140138 Methylobacterium extorquens PA1 5833318 YP_001641183.1 CDS Mext_3738 NC_010172.1 4140140 4143127 D TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: xau:Xaut_0867 sarcosine oxidase, alpha subunit family; sarcosine oxidase subunit alpha 4140140..4143127 Methylobacterium extorquens PA1 5832221 YP_001641184.1 CDS Mext_3739 NC_010172.1 4143120 4143710 D PFAM: Sarcosine oxidase gamma subunit; KEGG: xau:Xaut_0866 sarcosine oxidase gamma subunit; sarcosine oxidase subunit gamma 4143120..4143710 Methylobacterium extorquens PA1 5832222 YP_001641185.1 CDS Mext_3740 NC_010172.1 4143853 4145214 D KEGG: xau:Xaut_0871 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 4143853..4145214 Methylobacterium extorquens PA1 5832223 YP_001641186.1 CDS Mext_3741 NC_010172.1 4145253 4145867 D hypothetical protein 4145253..4145867 Methylobacterium extorquens PA1 5832224 YP_001641187.1 CDS Mext_3742 NC_010172.1 4146167 4146676 R PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: xau:Xaut_0317 YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein complement(4146167..4146676) Methylobacterium extorquens PA1 5832225 YP_001641188.1 CDS Mext_3743 NC_010172.1 4146690 4147484 R KEGG: acr:Acry_0997 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta complement(4146690..4147484) Methylobacterium extorquens PA1 5832426 YP_001641189.1 CDS Mext_3744 NC_010172.1 4147481 4148695 R PFAM: Electron transfer flavoprotein alpha subunit; KEGG: gbe:GbCGDNIH1_0071 electron transfer flavoprotein alpha-subunit; electron transfer flavoprotein alpha subunit complement(4147481..4148695) Methylobacterium extorquens PA1 5832427 YP_001641190.1 CDS Mext_3745 NC_010172.1 4148692 4150593 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gbe:GbCGDNIH1_0072 fumarate reductase iron-sulfur protein; hypothetical protein complement(4148692..4150593) Methylobacterium extorquens PA1 5832428 YP_001641191.1 CDS Mext_3746 NC_010172.1 4150856 4152898 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gbe:GbCGDNIH1_0073 NADH-dependent flavin oxidoreductase; NADH:flavin oxidoreductase complement(4150856..4152898) Methylobacterium extorquens PA1 5832429 YP_001641192.1 CDS Mext_3747 NC_010172.1 4152961 4154088 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: gbe:GbCGDNIH1_0075 ring hydroxylating dioxygenase oxidoreductase subunit; oxidoreductase FAD-binding subunit complement(4152961..4154088) Methylobacterium extorquens PA1 5832430 YP_001641193.1 CDS Mext_3748 NC_010172.1 4154092 4155351 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: gbe:GbCGDNIH1_0076 ring hydroxylating dioxygenase, alpha-subunit; Rieske (2Fe-2S) domain-containing protein complement(4154092..4155351) Methylobacterium extorquens PA1 5832957 YP_001641194.1 CDS Mext_3749 NC_010172.1 4155476 4156282 R TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: bbt:BBta_2598 putative inositol monophosphatase family protein; histidinol-phosphate phosphatase complement(4155476..4156282) Methylobacterium extorquens PA1 5832958 YP_001641195.1 CDS Mext_3750 NC_010172.1 4156286 4157221 R PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: bbt:BBta_2597 putative ethanolamine kinase; choline/ethanolamine kinase complement(4156286..4157221) Methylobacterium extorquens PA1 5832959 YP_001641196.1 CDS Mext_3751 NC_010172.1 4157444 4158424 R PFAM: aminoglycoside phosphotransferase; KEGG: bbt:BBta_2596 hypothetical protein; aminoglycoside phosphotransferase complement(4157444..4158424) Methylobacterium extorquens PA1 5832960 YP_001641197.1 CDS Mext_3752 NC_010172.1 4158421 4159746 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(4158421..4159746) Methylobacterium extorquens PA1 5832961 YP_001641198.1 CDS Mext_3753 NC_010172.1 4159746 4161584 R KEGG: bbt:BBta_2593 putative ABC transporter, ATP binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(4159746..4161584) Methylobacterium extorquens PA1 5833253 YP_001641199.1 CDS Mext_3754 NC_010172.1 4161584 4162507 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_2592 putative ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein complement(4161584..4162507) Methylobacterium extorquens PA1 5833254 YP_001641200.1 CDS Mext_3755 NC_010172.1 4162507 4163487 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_2591 putative ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein complement(4162507..4163487) Methylobacterium extorquens PA1 5833255 YP_001641201.1 CDS Mext_3756 NC_010172.1 4163581 4165203 R PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_2590 putative ABC transporter, substrate-binding protein; extracellular solute-binding protein complement(4163581..4165203) Methylobacterium extorquens PA1 5833256 YP_001641202.1 CDS Mext_3757 NC_010172.1 4165486 4168041 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: rpb:RPB_4403 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(4165486..4168041) Methylobacterium extorquens PA1 5833257 YP_001641203.1 CDS Mext_3758 NC_010172.1 4168175 4169149 R PFAM: FecR protein; KEGG: rpa:RPA3281 probable FecR, iron siderophore sensor protein; FecR protein complement(4168175..4169149) Methylobacterium extorquens PA1 5833366 YP_001641204.1 CDS Mext_3759 NC_010172.1 4169246 4169788 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: xau:Xaut_2777 RNA polymerase, sigma-24 subunit, ECF subfamily; sigma-70 family RNA polymerase sigma factor complement(4169246..4169788) Methylobacterium extorquens PA1 5833367 YP_001641205.1 CDS Mext_3760 NC_010172.1 4170645 4172429 D PFAM: IucA/IucC family protein; KEGG: nwi:Nwi_2302 siderophore synthetase component; IucA/IucC family protein 4170645..4172429 Methylobacterium extorquens PA1 5833368 YP_001641206.1 CDS Mext_3761 NC_010172.1 4172413 4175409 D PFAM: AMP-dependent synthetase and ligase; IucA/IucC family protein; KEGG: rpa:RPA2389 possible rhizobactin siderophore biosynthesis protein RhsF; IucA/IucC family protein 4172413..4175409 Methylobacterium extorquens PA1 5833369 YP_001641207.1 CDS Mext_3762 NC_010172.1 4175406 4176707 D KEGG: rpb:RPB_4395 hypothetical protein; hypothetical protein 4175406..4176707 Methylobacterium extorquens PA1 5833370 YP_001641208.1 CDS Mext_3763 NC_010172.1 4176704 4177540 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rpa:RPA2386 hypothetical protein; xylose isomerase domain-containing protein 4176704..4177540 Methylobacterium extorquens PA1 5833287 YP_001641209.1 CDS Mext_3764 NC_010172.1 4177569 4177847 D KEGG: nwi:Nwi_2293 hypothetical protein; hypothetical protein 4177569..4177847 Methylobacterium extorquens PA1 5833288 YP_001641210.1 CDS Mext_3765 NC_010172.1 4178137 4178637 D PFAM: GCN5-related N-acetyltransferase; KEGG: rpb:RPB_4402 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4178137..4178637 Methylobacterium extorquens PA1 5833289 YP_001641211.1 CDS Mext_3766 NC_010172.1 4178805 4179482 D KEGG: smd:Smed_6350 hypothetical protein; hypothetical protein 4178805..4179482 Methylobacterium extorquens PA1 5833290 YP_001641212.1 CDS Mext_3767 NC_010172.1 4179706 4179915 D hypothetical protein 4179706..4179915 Methylobacterium extorquens PA1 5833291 YP_001641213.1 CDS Mext_3768 NC_010172.1 4180288 4181061 R KEGG: xau:Xaut_2539 putative transcriptional regulator, TetR family; TetR family transcriptional regulator complement(4180288..4181061) Methylobacterium extorquens PA1 5834943 YP_001641214.1 CDS Mext_3769 NC_010172.1 4181132 4181965 R KEGG: bbt:BBta_1743 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase complement(4181132..4181965) Methylobacterium extorquens PA1 5834944 YP_001641215.1 CDS Mext_3770 NC_010172.1 4182047 4182553 R PFAM: Protein of unknown function DUF1790; KEGG: xau:Xaut_2546 protein of unknown function DUF1790; hypothetical protein complement(4182047..4182553) Methylobacterium extorquens PA1 5834945 YP_001641216.1 CDS Mext_3771 NC_010172.1 4183012 4183293 R PFAM: protein of unknown function DUF526; KEGG: rpc:RPC_1414 protein of unknown function DUF526; hypothetical protein complement(4183012..4183293) Methylobacterium extorquens PA1 5834946 YP_001641217.1 CDS Mext_3772 NC_010172.1 4183536 4184261 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bbt:BBta_6216 putative two component response transcriptional regulator (OmpR family); response regulator receiver 4183536..4184261 Methylobacterium extorquens PA1 5834947 YP_001641218.1 CDS Mext_3773 NC_010172.1 4184258 4185718 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpc:RPC_4653 periplasmic sensor signal transduction histidine kinase; ATPase domain-containing protein 4184258..4185718 Methylobacterium extorquens PA1 5835688 YP_001641219.1 CDS Mext_3774 NC_010172.1 4185904 4187091 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: psp:PSPPH_0905 GGDEF domain protein; diguanylate cyclase 4185904..4187091 Methylobacterium extorquens PA1 5835689 YP_001641220.1 CDS Mext_3775 NC_010172.1 4187220 4187876 R KEGG: rle:pRL110461 putative glutathione-S-transferase protein; putative glutathione-S-transferase protein complement(4187220..4187876) Methylobacterium extorquens PA1 5835690 YP_001641221.1 CDS Mext_3776 NC_010172.1 4188227 4189441 D TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: xau:Xaut_2136 polyhydroxyalkanoate depolymerase, intracellular; polyhydroxyalkanoate depolymerase 4188227..4189441 Methylobacterium extorquens PA1 5835691 YP_001641222.1 CDS rpsU NC_010172.1 4189876 4190193 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 4189876..4190193 Methylobacterium extorquens PA1 5835692 YP_001641223.1 CDS Mext_3778 NC_010172.1 4190294 4190683 R PFAM: response regulator receiver; KEGG: bra:BRADO1367 putative two-component response regulator; response regulator receiver complement(4190294..4190683) Methylobacterium extorquens PA1 5833946 YP_001641224.1 CDS Mext_3779 NC_010172.1 4190963 4191748 D PFAM: glutamine amidotransferase class-II; KEGG: bra:BRADO0859 putative glutamine amidotransferase, class-II; glutamine amidotransferase 4190963..4191748 Methylobacterium extorquens PA1 5833947 YP_001641225.1 CDS Mext_3780 NC_010172.1 4191900 4192691 D PFAM: protein of unknown function DUF81; KEGG: ccr:CC_0372 hypothetical protein; hypothetical protein 4191900..4192691 Methylobacterium extorquens PA1 5833948 YP_001641226.1 CDS Mext_3781 NC_010172.1 4192720 4193766 R PFAM: MaoC domain protein dehydratase; KEGG: xau:Xaut_1970 MaoC domain protein dehydratase; dehydratase complement(4192720..4193766) Methylobacterium extorquens PA1 5833949 YP_001641227.1 CDS Mext_3782 NC_010172.1 4193961 4194272 R PFAM: protein of unknown function YGGT; KEGG: rpa:RPA0415 family of unknown function YGGT; hypothetical protein complement(4193961..4194272) Methylobacterium extorquens PA1 5833950 YP_001641228.1 CDS Mext_3783 NC_010172.1 4194558 4195562 D PFAM: integrase family protein; KEGG: bja:bll0870 probable site-specific integrase/recombinase; integrase family protein 4194558..4195562 Methylobacterium extorquens PA1 5834161 YP_001641229.1 CDS Mext_3784 NC_010172.1 4196319 4197446 R hypothetical protein complement(4196319..4197446) Methylobacterium extorquens PA1 5834162 YP_001641230.1 CDS Mext_3785 NC_010172.1 4198641 4199945 D KEGG: lma:LmjF34.0690 hypothetical protein, conserved; chromosome segregation ATPase-like protein 4198641..4199945 Methylobacterium extorquens PA1 5834163 YP_001641231.1 CDS Mext_3786 NC_010172.1 4200118 4200378 D hypothetical protein 4200118..4200378 Methylobacterium extorquens PA1 5834948 YP_001641232.1 CDS Mext_3787 NC_010172.1 4201211 4201633 D PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator; ROSMUCR transcriptional regulator 4201211..4201633 Methylobacterium extorquens PA1 5834949 YP_001641233.1 CDS Mext_3788 NC_010172.1 4202168 4202977 D PFAM: Resolvase domain; KEGG: rpb:RPB_0923 resolvase-like; resolvase domain-containing protein 4202168..4202977 Methylobacterium extorquens PA1 5834950 YP_001641234.1 CDS Mext_3789 NC_010172.1 4204081 4205334 D KEGG: bsu:BG13632 hypothetical protein; hypothetical protein 4204081..4205334 Methylobacterium extorquens PA1 5834951 YP_001641235.1 CDS Mext_3790 NC_010172.1 4205749 4206561 R PFAM: transposase IS4 family protein; KEGG: acr:Acry_3208 transposase, IS4 family protein; transposase IS4 family protein complement(4205749..4206561) Methylobacterium extorquens PA1 5834952 YP_001641236.1 CDS Mext_3791 NC_010172.1 4209397 4210218 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr2833 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(4209397..4210218) Methylobacterium extorquens PA1 5835267 YP_001641237.1 CDS Mext_3792 NC_010172.1 4210411 4210710 R hypothetical protein complement(4210411..4210710) Methylobacterium extorquens PA1 5835268 YP_001641238.1 CDS Mext_3793 NC_010172.1 4210938 4211387 D PFAM: regulatory protein MarR; KEGG: mxa:MXAN_3240 transcriptional regulator, MarR family; regulatory protein MarR 4210938..4211387 Methylobacterium extorquens PA1 5835269 YP_001641239.1 CDS Mext_3794 NC_010172.1 4211450 4211812 R PFAM: DoxX family protein; KEGG: jan:Jann_0759 hypothetical protein; DoxX family protein complement(4211450..4211812) Methylobacterium extorquens PA1 5833911 YP_001641240.1 CDS Mext_3795 NC_010172.1 4211848 4213254 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: pol:Bpro_3542 MATE efflux family protein; MATE efflux family protein complement(4211848..4213254) Methylobacterium extorquens PA1 5833912 YP_001641241.1 CDS Mext_3796 NC_010172.1 4213289 4213645 R hypothetical protein complement(4213289..4213645) Methylobacterium extorquens PA1 5833913 YP_001641242.1 CDS Mext_3797 NC_010172.1 4213821 4214363 R PFAM: regulatory protein TetR; KEGG: reh:H16_B1139 transcriptional regulator; regulatory protein TetR complement(4213821..4214363) Methylobacterium extorquens PA1 5833914 YP_001641243.1 CDS Mext_3798 NC_010172.1 4214603 4217710 R PFAM: acriflavin resistance protein; KEGG: mms:mma_1025 cation efflux system protein; acriflavin resistance protein complement(4214603..4217710) Methylobacterium extorquens PA1 5833915 YP_001641244.1 CDS Mext_3799 NC_010172.1 4217707 4218792 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mms:mma_1024 component of multidrug efflux system; RND family efflux transporter MFP subunit complement(4217707..4218792) Methylobacterium extorquens PA1 5834726 YP_001641245.1 CDS Mext_3800 NC_010172.1 4218866 4219165 D KEGG: bbt:BBta_p0203 hypothetical protein; hypothetical protein 4218866..4219165 Methylobacterium extorquens PA1 5834727 YP_001641246.1 CDS Mext_3801 NC_010172.1 4219842 4220750 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:pRL100447 putative LysR family transcriptional regulator; carbonate dehydratase complement(4219842..4220750) Methylobacterium extorquens PA1 5834728 YP_001641247.1 CDS Mext_3802 NC_010172.1 4220845 4221726 D PFAM: aldo/keto reductase; KEGG: rle:pRL100446 putative aldo-keto reductase; aldo/keto reductase 4220845..4221726 Methylobacterium extorquens PA1 5834729 YP_001641248.1 CDS Mext_3803 NC_010172.1 4222153 4223622 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-3 domain protein; KEGG: rpd:RPD_0066 GGDEF domain; diguanylate cyclase 4222153..4223622 Methylobacterium extorquens PA1 5834730 YP_001641249.1 CDS Mext_3804 NC_010172.1 4223977 4225773 R PFAM: EAL domain protein; GAF domain protein; KEGG: aav:Aave_3096 diguanylate phosphodiesterase with GAF sensor; EAL domain-containing protein complement(4223977..4225773) Methylobacterium extorquens PA1 5832210 YP_001641250.1 CDS Mext_3805 NC_010172.1 4226169 4226477 R hypothetical protein complement(4226169..4226477) Methylobacterium extorquens PA1 5832211 YP_001641251.1 CDS Mext_3806 NC_010172.1 4226688 4227731 D PFAM: regulatory protein LysR; KEGG: bvi:Bcep1808_0955 transcriptional regulator of molybdate metabolism, LysR family; regulatory protein LysR 4226688..4227731 Methylobacterium extorquens PA1 5832212 YP_001641252.1 CDS Mext_3807 NC_010172.1 4228269 4229333 D KEGG: bra:BRADO0251 hypothetical protein; hypothetical protein 4228269..4229333 Methylobacterium extorquens PA1 5832213 YP_001641253.1 CDS Mext_3808 NC_010172.1 4229379 4230482 D KEGG: bja:blr0530 hypothetical protein; hypothetical protein 4229379..4230482 Methylobacterium extorquens PA1 5832214 YP_001641254.1 CDS Mext_3809 NC_010172.1 4231505 4231888 D hypothetical protein 4231505..4231888 Methylobacterium extorquens PA1 5835082 YP_001641255.1 CDS Mext_3810 NC_010172.1 4231962 4232222 R KEGG: smd:Smed_1425 hypothetical protein; hypothetical protein complement(4231962..4232222) Methylobacterium extorquens PA1 5835083 YP_001641256.1 CDS Mext_3811 NC_010172.1 4232346 4232819 R KEGG: xau:Xaut_2147 hypothetical protein; hypothetical protein complement(4232346..4232819) Methylobacterium extorquens PA1 5835084 YP_001641257.1 CDS Mext_3812 NC_010172.1 4232899 4234854 R PFAM: protein of unknown function UPF0118; KEGG: gbe:GbCGDNIH1_2397 hypothetical membrane spanning protein; hypothetical protein complement(4232899..4234854) Methylobacterium extorquens PA1 5835085 YP_001641258.1 CDS Mext_3813 NC_010172.1 4235034 4236536 D KEGG: pap:PSPA7_0636 transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein 4235034..4236536 Methylobacterium extorquens PA1 5835086 YP_001641259.1 CDS Mext_3814 NC_010172.1 4236960 4237220 D PFAM: Transglycosylase-associated protein; KEGG: bov:BOV_0440 putative transglycosylase-associated protein; transglycosylase-associated protein 4236960..4237220 Methylobacterium extorquens PA1 5835093 YP_001641260.1 CDS Mext_3815 NC_010172.1 4237269 4238243 D KEGG: smd:Smed_5683 conserved hypothetical membrane spanning protein; hypothetical protein 4237269..4238243 Methylobacterium extorquens PA1 5835094 YP_001641261.1 CDS Mext_3816 NC_010172.1 4238240 4238731 D KEGG: sus:Acid_7531 hypothetical protein; hypothetical protein 4238240..4238731 Methylobacterium extorquens PA1 5835095 YP_001641262.1 CDS Mext_3817 NC_010172.1 4238728 4239612 D KEGG: sus:Acid_7532 hypothetical protein; hypothetical protein 4238728..4239612 Methylobacterium extorquens PA1 5835096 YP_001641263.1 CDS Mext_3818 NC_010172.1 4240452 4240871 D KEGG: bja:bll4998 hypothetical protein; hypothetical protein 4240452..4240871 Methylobacterium extorquens PA1 5835097 YP_001641264.1 CDS Mext_3819 NC_010172.1 4240946 4242205 D TIGRFAM: esterase, PHB depolymerase family; KEGG: xau:Xaut_3344 esterase, PHB depolymerase family; PHB depolymerase family esterase 4240946..4242205 Methylobacterium extorquens PA1 5834731 YP_001641265.1 CDS Mext_3821 NC_010172.1 4242382 4243458 R PFAM: Choloylglycine hydrolase; KEGG: rpb:RPB_3497 choloylglycine hydrolase; choloylglycine hydrolase complement(4242382..4243458) Methylobacterium extorquens PA1 5834733 YP_001641266.1 CDS Mext_3822 NC_010172.1 4243905 4244831 D PFAM: alpha/beta hydrolase fold; KEGG: rxy:Rxyl_2437 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4243905..4244831 Methylobacterium extorquens PA1 5834734 YP_001641267.1 CDS Mext_3823 NC_010172.1 4244810 4245679 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: acr:Acry_1099 transcriptional regulator, LysR family; LysR substrate-binding protein complement(4244810..4245679) Methylobacterium extorquens PA1 5834735 YP_001641268.1 CDS Mext_3824 NC_010172.1 4246143 4246850 D PFAM: protein of unknown function DUF1275; KEGG: rso:RSc0238 putative permease transmembrane protein; hypothetical protein 4246143..4246850 Methylobacterium extorquens PA1 5835274 YP_001641269.1 CDS Mext_3825 NC_010172.1 4247270 4248100 D PFAM: helix-turn-helix domain protein; GAF domain protein; KEGG: tel:tll1282 two-component hybrid sensor and regulator; GAF domain-containing protein 4247270..4248100 Methylobacterium extorquens PA1 5835275 YP_001641270.1 CDS Mext_3826 NC_010172.1 4248231 4249928 D KEGG: rpe:RPE_4154 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein 4248231..4249928 Methylobacterium extorquens PA1 5835276 YP_001641271.1 CDS Mext_3827 NC_010172.1 4250263 4251753 D KEGG: xau:Xaut_3516 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 4250263..4251753 Methylobacterium extorquens PA1 5835277 YP_001641272.1 CDS Mext_3828 NC_010172.1 4252417 4252776 D inactive form; acid-resistance protein 4252417..4252776 Methylobacterium extorquens PA1 5835278 YP_001641273.1 CDS Mext_3829 NC_010172.1 4253366 4254733 R PFAM: Chloride channel core; KEGG: xau:Xaut_2460 chloride channel core; chloride channel core complement(4253366..4254733) Methylobacterium extorquens PA1 5833500 YP_001641274.1 CDS Mext_3830 NC_010172.1 4254862 4256466 R KEGG: bja:blr7330 AcrB/AcrD/AcrF family protein; AcrB/AcrD/AcrF family protein complement(4254862..4256466) Methylobacterium extorquens PA1 5833501 YP_001641275.1 CDS Mext_3832 NC_010172.1 4258111 4259448 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:blr7329 putative multidrug resistance protein; RND family efflux transporter MFP subunit complement(4258111..4259448) Methylobacterium extorquens PA1 5833503 YP_001641276.1 CDS Mext_3833 NC_010172.1 4260261 4261271 R TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: nha:Nham_4073 cytochrome d ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II complement(4260261..4261271) Methylobacterium extorquens PA1 5833504 YP_001641277.1 CDS Mext_3834 NC_010172.1 4261286 4262710 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: nha:Nham_4072 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I complement(4261286..4262710) Methylobacterium extorquens PA1 5833728 YP_001641278.1 CDS Mext_3835 NC_010172.1 4262955 4263737 R PFAM: protein of unknown function DUF81; KEGG: acr:Acry_3050 protein of unknown function DUF81; hypothetical protein complement(4262955..4263737) Methylobacterium extorquens PA1 5833729 YP_001641279.1 CDS Mext_3836 NC_010172.1 4263734 4264162 R PFAM: regulatory protein ArsR; KEGG: rru:Rru_A1717 transcriptional regulator, ArsR family; regulatory protein ArsR complement(4263734..4264162) Methylobacterium extorquens PA1 5833730 YP_001641280.1 CDS Mext_3837 NC_010172.1 4264159 4265052 R PFAM: beta-lactamase domain protein; KEGG: pde:Pden_4706 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(4264159..4265052) Methylobacterium extorquens PA1 5833731 YP_001641281.1 CDS Mext_3838 NC_010172.1 4265055 4265720 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rpc:RPC_1920 peroxidase; peroxiredoxin complement(4265055..4265720) Methylobacterium extorquens PA1 5833732 YP_001641282.1 CDS Mext_3839 NC_010172.1 4265817 4267520 D PFAM: protein of unknown function DUF442; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: reu:Reut_B3588 protein of unknown function DUF442; hypothetical protein 4265817..4267520 Methylobacterium extorquens PA1 5833469 YP_001641283.1 CDS Mext_3840 NC_010172.1 4267769 4268908 D KEGG: stp:Strop_1906 tetratricopeptide TPR_4; hypothetical protein 4267769..4268908 Methylobacterium extorquens PA1 5833470 YP_001641284.1 CDS Mext_3841 NC_010172.1 4268984 4269850 R PFAM: alpha/beta hydrolase fold; KEGG: sru:SRU_0288 hydrolase, alpha/beta fold family, putative; alpha/beta hydrolase fold protein complement(4268984..4269850) Methylobacterium extorquens PA1 5833471 YP_001641285.1 CDS Mext_3842 NC_010172.1 4270017 4271066 D PFAM: periplasmic binding protein; KEGG: rpc:RPC_1985 periplasmic binding protein; periplasmic binding protein 4270017..4271066 Methylobacterium extorquens PA1 5833472 YP_001641286.1 CDS Mext_3843 NC_010172.1 4271063 4272112 D PFAM: transport system permease protein; ABC-3 protein; KEGG: pde:Pden_0865 transport system permease protein; transport system permease 4271063..4272112 Methylobacterium extorquens PA1 5833473 YP_001641287.1 CDS Mext_3844 NC_010172.1 4272109 4272882 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_1423 ABC transporter related; ABC transporter-like protein 4272109..4272882 Methylobacterium extorquens PA1 5832158 YP_001641288.1 CDS Mext_3845 NC_010172.1 4273034 4273777 R PFAM: oxidoreductase molybdopterin binding; KEGG: rle:RL3017 putative exported molybdopterin cofactor-containing protein; molybdopterin binding oxidoreductase complement(4273034..4273777) Methylobacterium extorquens PA1 5832159 YP_001641289.1 CDS Mext_3846 NC_010172.1 4273774 4274502 R KEGG: aba:Acid345_3942 hypothetical protein; hypothetical protein complement(4273774..4274502) Methylobacterium extorquens PA1 5832160 YP_001641290.1 CDS Mext_3847 NC_010172.1 4274516 4275112 R PFAM: NodS family protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpb:RPB_4100 NodS; type 12 methyltransferase complement(4274516..4275112) Methylobacterium extorquens PA1 5832161 YP_001641291.1 CDS Mext_3848 NC_010172.1 4275109 4276284 R PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: rpb:RPB_4098 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase type 2 complement(4275109..4276284) Methylobacterium extorquens PA1 5832162 YP_001641292.1 CDS Mext_3849 NC_010172.1 4276398 4276814 D hypothetical protein 4276398..4276814 Methylobacterium extorquens PA1 5832604 YP_001641293.1 CDS Mext_3850 NC_010172.1 4276820 4277065 D hypothetical protein 4276820..4277065 Methylobacterium extorquens PA1 5832605 YP_001641294.1 CDS Mext_3851 NC_010172.1 4277068 4277286 D hypothetical protein 4277068..4277286 Methylobacterium extorquens PA1 5832606 YP_001641295.1 CDS Mext_3852 NC_010172.1 4277374 4278543 R PFAM: aldo/keto reductase; KEGG: pcu:pc0543 probable oxidoreductase MocA family; aldo/keto reductase complement(4277374..4278543) Methylobacterium extorquens PA1 5832607 YP_001641296.1 CDS Mext_3853 NC_010172.1 4278724 4278951 D hypothetical protein 4278724..4278951 Methylobacterium extorquens PA1 5832608 YP_001641297.1 CDS Mext_3854 NC_010172.1 4278957 4279556 R PFAM: isochorismatase hydrolase; KEGG: mva:Mvan_4420 isochorismatase hydrolase; isochorismatase hydrolase complement(4278957..4279556) Methylobacterium extorquens PA1 5833704 YP_001641298.1 CDS Mext_3855 NC_010172.1 4279811 4281127 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:bll0300 RagD protein; RND family efflux transporter MFP subunit complement(4279811..4281127) Methylobacterium extorquens PA1 5833705 YP_001641299.1 CDS Mext_3856 NC_010172.1 4281120 4284350 R PFAM: acriflavin resistance protein; KEGG: bja:bll0301 cation efflux protein; acriflavin resistance protein complement(4281120..4284350) Methylobacterium extorquens PA1 5833706 YP_001641300.1 CDS Mext_3857 NC_010172.1 4284663 4286039 R KEGG: sus:Acid_6814 hypothetical protein; hypothetical protein complement(4284663..4286039) Methylobacterium extorquens PA1 5833707 YP_001641301.1 CDS Mext_3858 NC_010172.1 4286036 4286773 R PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mfa:Mfla_2111 NADP oxidoreductase, coenzyme F420-dependent; coenzyme F420-dependent NADP oxidoreductase complement(4286036..4286773) Methylobacterium extorquens PA1 5833708 YP_001641302.1 CDS Mext_3859 NC_010172.1 4286763 4287692 R PFAM: aldo/keto reductase; KEGG: pmy:Pmen_0376 aldo/keto reductase; aldo/keto reductase complement(4286763..4287692) Methylobacterium extorquens PA1 5832769 YP_001641303.1 CDS Mext_3860 NC_010172.1 4287765 4288319 R TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein; KEGG: rpe:RPE_0929 putative methyltransferase; methyltransferase complement(4287765..4288319) Methylobacterium extorquens PA1 5832770 YP_001641304.1 CDS Mext_3861 NC_010172.1 4288332 4290341 R PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: xau:Xaut_3094 RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein complement(4288332..4290341) Methylobacterium extorquens PA1 5832771 YP_001641305.1 CDS Mext_3862 NC_010172.1 4290432 4290608 R PFAM: protein of unknown function DUF1328; KEGG: rpb:RPB_2024 protein of unknown function DUF1328; hypothetical protein complement(4290432..4290608) Methylobacterium extorquens PA1 5832772 YP_001641306.1 CDS Mext_3863 NC_010172.1 4290776 4291543 R TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: har:HEAR1959 NADPH-dependent FMN reductase; arsenical resistance protein ArsH complement(4290776..4291543) Methylobacterium extorquens PA1 5832773 YP_001641307.1 CDS Mext_3864 NC_010172.1 4291594 4291953 D PFAM: regulatory protein ArsR; KEGG: xau:Xaut_0874 regulatory protein ArsR; regulatory protein ArsR 4291594..4291953 Methylobacterium extorquens PA1 5833898 YP_001641308.1 CDS Mext_3865 NC_010172.1 4291946 4292383 D TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: mes:Meso_0324 arsenate reductase; arsenate reductase 4291946..4292383 Methylobacterium extorquens PA1 5833899 YP_001641309.1 CDS Mext_3866 NC_010172.1 4292393 4293469 D TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: nwi:Nwi_3126 arsenite efflux pump ACR3; arsenical-resistance protein 4292393..4293469 Methylobacterium extorquens PA1 5833900 YP_001641310.1 CDS Mext_3867 NC_010172.1 4293668 4295770 R KEGG: bja:bll0955 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; diguanylate cyclase complement(4293668..4295770) Methylobacterium extorquens PA1 5833901 YP_001641311.1 CDS Mext_3868 NC_010172.1 4296085 4297002 D PFAM: alpha/beta hydrolase fold; KEGG: rpa:RPA1163 possible epoxide hydrolase; alpha/beta hydrolase fold protein 4296085..4297002 Methylobacterium extorquens PA1 5833902 YP_001641312.1 CDS Mext_3869 NC_010172.1 4297007 4297708 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr7900 putative nodulation protein; short-chain dehydrogenase/reductase SDR complement(4297007..4297708) Methylobacterium extorquens PA1 5832836 YP_001641313.1 CDS Mext_3870 NC_010172.1 4297800 4298243 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mes:Meso_0427 CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase complement(4297800..4298243) Methylobacterium extorquens PA1 5832837 YP_001641314.1 CDS Mext_3871 NC_010172.1 4298257 4299564 R KEGG: mlo:mlr7447 phosphoribosylamine-glycine ligase; TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase; phosphoribosylamine--glycine ligase complement(4298257..4299564) Methylobacterium extorquens PA1 5832838 YP_001641315.1 CDS Mext_3872 NC_010172.1 4299648 4300385 D KEGG: gvi:gll1539 unknown protein; hypothetical protein 4299648..4300385 Methylobacterium extorquens PA1 5832839 YP_001641316.1 CDS Mext_3873 NC_010172.1 4300905 4302473 D KEGG: xau:Xaut_1413 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit 4300905..4302473 Methylobacterium extorquens PA1 5832840 YP_001641317.1 CDS Mext_3874 NC_010172.1 4302619 4302846 D KEGG: ret:RHE_CH00843 hypothetical protein; hypothetical protein 4302619..4302846 Methylobacterium extorquens PA1 5831170 YP_001641318.1 CDS Mext_3875 NC_010172.1 4302918 4303958 D KEGG: xau:Xaut_2553 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 4302918..4303958 Methylobacterium extorquens PA1 5831171 YP_001641319.1 CDS Mext_3876 NC_010172.1 4304083 4304547 R PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: rpc:RPC_1206 GreA/GreB family elongation factor; transcription elongation factor GreA/GreB domain-containing protein complement(4304083..4304547) Methylobacterium extorquens PA1 5831172 YP_001641320.1 CDS Mext_3877 NC_010172.1 4304568 4305566 R TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bra:BRADO2038 putative dehydrogenase, NAD(P)-binding domain and GroES-like domain; quinone oxidoreductase complement(4304568..4305566) Methylobacterium extorquens PA1 5831173 YP_001641321.1 CDS Mext_3878 NC_010172.1 4305672 4306271 R KEGG: mlo:mll8471 hypothetical protein; hypothetical protein complement(4305672..4306271) Methylobacterium extorquens PA1 5831174 YP_001641322.1 CDS Mext_3879 NC_010172.1 4306750 4307088 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bja:bll0157 ferredoxin; 4Fe-4S ferredoxin 4306750..4307088 Methylobacterium extorquens PA1 5832290 YP_001641323.1 CDS Mext_3880 NC_010172.1 4307608 4308198 D PFAM: transcription factor CarD; KEGG: oan:Oant_1134 transcriptional regulator, CarD family; transcription factor CarD 4307608..4308198 Methylobacterium extorquens PA1 5832291 YP_001641324.1 CDS rpoH2 NC_010172.1 4308481 4309353 D binds with the catalytic core of RNA polymerase to produce the holoenzyme; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma-32 is responsible for the expression of heat shock promoters; there are paralogs in Rhizobium and Sinorhizobium; the proteins in this cluster act as secondary heat shock sigma factors; the Rhizobium sigma-32 factor may also be involved in exopolysaccharide production; RNA polymerase factor sigma-32 4308481..4309353 Methylobacterium extorquens PA1 5832292 YP_001641325.1 CDS Mext_3883 NC_010172.1 4310740 4310940 R KEGG: bja:blr8004 probable site-specific integrase/recombinase; putative site-specific integrase/recombinase complement(4310740..4310940) Methylobacterium extorquens PA1 5832192 YP_001641326.1 CDS Mext_3884 NC_010172.1 4311429 4311683 D KEGG: pfl:PFL_5107 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 4311429..4311683 Methylobacterium extorquens PA1 5832193 YP_001641327.1 CDS Mext_3885 NC_010172.1 4311761 4313305 R TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid complement(4311761..4313305) Methylobacterium extorquens PA1 5834403 YP_001641328.1 CDS Mext_3886 NC_010172.1 4313479 4315101 D PFAM: Hemolysin-type calcium-binding region; KEGG: rsh:Rsph17029_4185 Na-Ca exchanger/integrin-beta4; hemolysin-type calcium-binding protein 4313479..4315101 Methylobacterium extorquens PA1 5834404 YP_001641329.1 CDS Mext_3887 NC_010172.1 4315140 4316114 R SMART: PDZ/DHR/GLGF domain protein; KEGG: bbt:BBta_1107 putative serine protease; PDZ/DHR/GLGF domain-containing protein complement(4315140..4316114) Methylobacterium extorquens PA1 5834405 YP_001641330.1 CDS Mext_3888 NC_010172.1 4316555 4317109 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rpb:RPB_3909 sigma-24 (FecI-like); sigma-70 family RNA polymerase sigma factor 4316555..4317109 Methylobacterium extorquens PA1 5834406 YP_001641331.1 CDS Mext_3889 NC_010172.1 4317106 4317885 D KEGG: acr:Acry_1332 uncharacterized protein-like protein; hypothetical protein 4317106..4317885 Methylobacterium extorquens PA1 5834407 YP_001641332.1 CDS Mext_3890 NC_010172.1 4318052 4319044 R KEGG: xau:Xaut_4179 hypothetical protein; hypothetical protein complement(4318052..4319044) Methylobacterium extorquens PA1 5834317 YP_001641333.1 CDS Mext_3891 NC_010172.1 4319528 4322809 R TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: xau:Xaut_4315 excinuclease ABC, A subunit; excinuclease ABC subunit A complement(4319528..4322809) Methylobacterium extorquens PA1 5834318 YP_001641334.1 CDS Mext_3892 NC_010172.1 4323038 4324096 D KEGG: bra:BRADO3576 conserved hypothetical protein; putative methyl-accepting chemotaxis protein; putative methyl-accepting chemotaxis protein 4323038..4324096 Methylobacterium extorquens PA1 5834319 YP_001641335.1 CDS Mext_3893 NC_010172.1 4324259 4326298 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Nitrate and nitrite sensing domain protein; KEGG: mag:amb3383 methyl-accepting chemotaxis protein; nitrate and nitrite sensing domain-containing protein 4324259..4326298 Methylobacterium extorquens PA1 5834320 YP_001641336.1 CDS Mext_3894 NC_010172.1 4326418 4327695 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mlo:mll7356 multidrug efflux membrane fusion protein MexE; RND family efflux transporter MFP subunit complement(4326418..4327695) Methylobacterium extorquens PA1 5834321 YP_001641337.1 CDS Mext_3895 NC_010172.1 4327778 4330942 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: nha:Nham_0712 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family protein 4327778..4330942 Methylobacterium extorquens PA1 5834883 YP_001641338.1 CDS Mext_3896 NC_010172.1 4330953 4331393 R KEGG: rpd:RPD_3796 response regulator receiver; hypothetical protein complement(4330953..4331393) Methylobacterium extorquens PA1 5834884 YP_001641339.1 CDS Mext_3897 NC_010172.1 4331459 4334251 R KEGG: swi:Swit_5219 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein complement(4331459..4334251) Methylobacterium extorquens PA1 5834885 YP_001641340.1 CDS Mext_3898 NC_010172.1 4334477 4335238 R SMART: regulatory protein Crp; KEGG: nha:Nham_0645 putative transcriptional regulator, Crp/Fnr family; regulatory protein Crp complement(4334477..4335238) Methylobacterium extorquens PA1 5834886 YP_001641341.1 CDS Mext_3899 NC_010172.1 4335493 4336344 R PFAM: glycoside hydrolase family 25; KEGG: rsp:RSP_3565 glycoside hydrolase, family 25; glycoside hydrolase family protein complement(4335493..4336344) Methylobacterium extorquens PA1 5834887 YP_001641342.1 CDS Mext_3900 NC_010172.1 4336542 4336994 D PFAM: protein of unknown function DUF1130; KEGG: rle:pRL80098 hypothetical protein; hypothetical protein 4336542..4336994 Methylobacterium extorquens PA1 5835667 YP_001641343.1 CDS Mext_3901 NC_010172.1 4337049 4338284 R TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: bja:blr4586 2-octaprenyl-6-methoxyphenyl hydroxylase; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase complement(4337049..4338284) Methylobacterium extorquens PA1 5835668 YP_001641344.1 CDS Mext_3902 NC_010172.1 4338896 4339123 D hypothetical protein 4338896..4339123 Methylobacterium extorquens PA1 5835669 YP_001641345.1 CDS Mext_3903 NC_010172.1 4339297 4340268 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: xau:Xaut_3872 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase 4339297..4340268 Methylobacterium extorquens PA1 5835670 YP_001641346.1 CDS Mext_3904 NC_010172.1 4340402 4341079 D PFAM: isochorismatase hydrolase; KEGG: rme:Rmet_1854 isochorismatase hydrolase; nicotinamidase 4340402..4341079 Methylobacterium extorquens PA1 5835671 YP_001641347.1 CDS Mext_3905 NC_010172.1 4341250 4342107 R PFAM: aminotransferase class IV; KEGG: zmo:ZMO0115 branched-chain amino acid aminotransferase; class IV aminotransferase complement(4341250..4342107) Methylobacterium extorquens PA1 5834788 YP_001641348.1 CDS Mext_3906 NC_010172.1 4342094 4342723 R TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: zmo:ZMO0114 anthranilate synthase component II; glutamine amidotransferase of anthranilate synthase complement(4342094..4342723) Methylobacterium extorquens PA1 5834789 YP_001641349.1 CDS Mext_3907 NC_010172.1 4342720 4344138 R TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: bja:bll2092 para-aminobenzoate synthetase component I; para-aminobenzoate synthase subunit I complement(4342720..4344138) Methylobacterium extorquens PA1 5834790 YP_001641350.1 CDS Mext_3908 NC_010172.1 4344413 4344676 D TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: xft:PD1099 DNA-damage-inducible protein; addiction module antitoxin 4344413..4344676 Methylobacterium extorquens PA1 5834791 YP_001641351.1 CDS Mext_3909 NC_010172.1 4344663 4344944 D TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: ajs:Ajs_4296 addiction module toxin, RelE/StbE family; addiction module antitoxin 4344663..4344944 Methylobacterium extorquens PA1 5834792 YP_001641352.1 CDS rimO NC_010172.1 4345061 4346407 D catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 4345061..4346407 Methylobacterium extorquens PA1 5835134 YP_001641353.1 CDS Mext_3911 NC_010172.1 4346504 4346689 D hypothetical protein 4346504..4346689 Methylobacterium extorquens PA1 5835135 YP_001641354.1 CDS Mext_3912 NC_010172.1 4346696 4347118 D KEGG: rpe:RPE_2057 membrane protein-like protein; hypothetical protein 4346696..4347118 Methylobacterium extorquens PA1 5835136 YP_001641355.1 CDS Mext_3913 NC_010172.1 4347484 4348314 R TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: xau:Xaut_4391 MazG family protein; MazG family protein complement(4347484..4348314) Methylobacterium extorquens PA1 5835137 YP_001641356.1 CDS Mext_3914 NC_010172.1 4349068 4350165 D PFAM: plasmid encoded RepA protein; KEGG: xac:XACb0056 replication protein A; plasmid encoded RepA protein 4349068..4350165 Methylobacterium extorquens PA1 5835138 YP_001641357.1 CDS Mext_3915 NC_010172.1 4350631 4351191 D KEGG: mmu:100042292 similar to CG10953-PA; hypothetical protein 4350631..4351191 Methylobacterium extorquens PA1 5834119 YP_001641358.1 CDS Mext_3916 NC_010172.1 4351324 4352619 R PFAM: Patatin; KEGG: rpd:RPD_2041 patatin; patatin complement(4351324..4352619) Methylobacterium extorquens PA1 5834120 YP_001641359.1 CDS Mext_3917 NC_010172.1 4353138 4354187 D PFAM: HpcH/HpaI aldolase; KEGG: xau:Xaut_3870 HpcH/HpaI aldolase; HpcH/HpaI aldolase 4353138..4354187 Methylobacterium extorquens PA1 5834121 YP_001641360.1 CDS Mext_3918 NC_010172.1 4354211 4354585 D TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: oan:Oant_3636 hemimethylated DNA binding protein; hemimethylated DNA binding protein 4354211..4354585 Methylobacterium extorquens PA1 5834122 YP_001641361.1 CDS Mext_3919 NC_010172.1 4354766 4355986 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pfo:Pfl_2170 putative diguanylate cyclase (GGDEF domain); diguanylate cyclase 4354766..4355986 Methylobacterium extorquens PA1 5834123 YP_001641362.1 CDS Mext_3920 NC_010172.1 4356081 4356332 R hypothetical protein complement(4356081..4356332) Methylobacterium extorquens PA1 5834817 YP_001641363.1 CDS Mext_3921 NC_010172.1 4356546 4357754 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xau:Xaut_1149 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 4356546..4357754 Methylobacterium extorquens PA1 5834818 YP_001641364.1 CDS Mext_3922 NC_010172.1 4357765 4360905 D PFAM: acriflavin resistance protein; KEGG: xau:Xaut_1148 acriflavin resistance protein; acriflavin resistance protein 4357765..4360905 Methylobacterium extorquens PA1 5834819 YP_001641365.1 CDS Mext_3923 NC_010172.1 4361319 4362476 D KEGG: rpd:RPD_3546 uncharacterized domain HDIG; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; metal dependent phophohydrolase 4361319..4362476 Methylobacterium extorquens PA1 5834820 YP_001641366.1 CDS Mext_3924 NC_010172.1 4362546 4363655 R TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: pfl:PFL_0325 agmatinase, putative; agmatinase complement(4362546..4363655) Methylobacterium extorquens PA1 5834821 YP_001641367.1 CDS Mext_3925 NC_010172.1 4363937 4364941 D KEGG: rca:Rcas_1415 methicillin resistance protein; hypothetical protein 4363937..4364941 Methylobacterium extorquens PA1 5833811 YP_001641368.1 CDS Mext_3926 NC_010172.1 4365010 4365372 R KEGG: sme:SMc01445 hypothetical protein; hypothetical protein complement(4365010..4365372) Methylobacterium extorquens PA1 5833812 YP_001641369.1 CDS Mext_3927 NC_010172.1 4365525 4366817 R KEGG: rsh:Rsph17029_2252 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase complement(4365525..4366817) Methylobacterium extorquens PA1 5833813 YP_001641370.1 CDS Mext_3928 NC_010172.1 4366869 4368431 R TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: bja:bll0760 ubiquinone biosynthesis protein; 2-polyprenylphenol 6-hydroxylase complement(4366869..4368431) Methylobacterium extorquens PA1 5833814 YP_001641371.1 CDS Mext_3929 NC_010172.1 4368658 4369437 R TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_0378 ubiquinone/menaquinone biosynthesis methyltransferases; ubiquinone/menaquinone biosynthesis methyltransferase complement(4368658..4369437) Methylobacterium extorquens PA1 5833815 YP_001641372.1 CDS Mext_3930 NC_010172.1 4369568 4369975 R KEGG: gbe:GbCGDNIH1_1342 dihydrofolate reductase; dihydrofolate reductase complement(4369568..4369975) Methylobacterium extorquens PA1 5833816 YP_001641373.1 CDS Mext_3931 NC_010172.1 4370048 4370791 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nha:Nham_1687 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4370048..4370791) Methylobacterium extorquens PA1 5830980 YP_001641374.1 CDS Mext_3932 NC_010172.1 4370797 4372272 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(4370797..4372272) Methylobacterium extorquens PA1 5830981 YP_001641375.1 CDS Mext_3933 NC_010172.1 4372525 4373118 R PFAM: Colicin V production protein; KEGG: bov:BOV_0454 putative colicin V production protein; colicin V production protein complement(4372525..4373118) Methylobacterium extorquens PA1 5830982 YP_001641376.1 CDS Mext_3934 NC_010172.1 4373506 4374624 D PFAM: beta-lactamase domain protein; KEGG: bbt:BBta_5036 putative metallo-hydrolase/oxidoreductase; beta-lactamase domain-containing protein 4373506..4374624 Methylobacterium extorquens PA1 5830983 YP_001641377.1 CDS Mext_3935 NC_010172.1 4374617 4375237 D PFAM: electron transport protein SCO1/SenC; KEGG: pla:Plav_0014 classical-complement-pathway C3/C5 convertase; electron transport protein SCO1/SenC 4374617..4375237 Methylobacterium extorquens PA1 5830984 YP_001641378.1 CDS Mext_3936 NC_010172.1 4375245 4376675 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(4375245..4376675) Methylobacterium extorquens PA1 5830985 YP_001641379.1 CDS Mext_3937 NC_010172.1 4376855 4377883 R KEGG: rpe:RPE_3334 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase complement(4376855..4377883) Methylobacterium extorquens PA1 5831009 YP_001641380.1 CDS Mext_3938 NC_010172.1 4378041 4379528 R TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: rpa:RPA3084 replicative DNA helicase (dnaB); replicative DNA helicase complement(4378041..4379528) Methylobacterium extorquens PA1 5831010 YP_001641381.1 CDS rplI NC_010172.1 4379852 4380424 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(4379852..4380424) Methylobacterium extorquens PA1 5831011 YP_001641382.1 CDS Mext_3940 NC_010172.1 4380462 4381520 R KEGG: rpc:RPC_2294 hypothetical protein; hypothetical protein complement(4380462..4381520) Methylobacterium extorquens PA1 5831012 YP_001641383.1 CDS rpsR NC_010172.1 4381656 4381910 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(4381656..4381910) Methylobacterium extorquens PA1 5831013 YP_001641384.1 CDS rpsF NC_010172.1 4381913 4382368 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(4381913..4382368) Methylobacterium extorquens PA1 5831014 YP_001641385.1 CDS Mext_3943 NC_010172.1 4382569 4383108 R PFAM: GCN5-related N-acetyltransferase; KEGG: sal:Sala_0626 gentamicin 3'-N-acetyltransferase; gentamicin 3'-N-acetyltransferase complement(4382569..4383108) Methylobacterium extorquens PA1 5834518 YP_001641386.1 CDS Mext_3944 NC_010172.1 4383139 4383513 R PFAM: protein of unknown function DUF1696; KEGG: mes:Meso_1246 protein of unknown function DUF1696; hypothetical protein complement(4383139..4383513) Methylobacterium extorquens PA1 5834519 YP_001641387.1 CDS Mext_3945 NC_010172.1 4383585 4383899 R hypothetical protein complement(4383585..4383899) Methylobacterium extorquens PA1 5834520 YP_001641388.1 CDS Mext_3946 NC_010172.1 4384309 4384707 R KEGG: gbe:GbCGDNIH1_0305 hypothetical protein; hypothetical protein complement(4384309..4384707) Methylobacterium extorquens PA1 5834521 YP_001641389.1 CDS Mext_3947 NC_010172.1 4384919 4385128 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rle:RL0451 putative cold shock protein; DNA-binding cold-shock protein complement(4384919..4385128) Methylobacterium extorquens PA1 5834522 YP_001641390.1 CDS Mext_3948 NC_010172.1 4385721 4385981 R hypothetical protein complement(4385721..4385981) Methylobacterium extorquens PA1 5834523 YP_001641391.1 CDS Mext_3949 NC_010172.1 4386425 4386955 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 4386425..4386955 Methylobacterium extorquens PA1 5834219 YP_001641392.1 CDS Mext_3950 NC_010172.1 4386952 4387524 D hypothetical protein 4386952..4387524 Methylobacterium extorquens PA1 5834220 YP_001641393.1 CDS Mext_3951 NC_010172.1 4387546 4389741 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bbt:BBta_2266 putative outer membrane hemin/siderophore receptor protein; TonB-dependent receptor plug complement(4387546..4389741) Methylobacterium extorquens PA1 5834221 YP_001641394.1 CDS Mext_3952 NC_010172.1 4389966 4390850 D KEGG: rpb:RPB_2180 hypothetical protein; hypothetical protein 4389966..4390850 Methylobacterium extorquens PA1 5834222 YP_001641395.1 CDS Mext_3953 NC_010172.1 4390867 4391376 R KEGG: bra:BRADO2748 hypothetical protein; hypothetical protein complement(4390867..4391376) Methylobacterium extorquens PA1 5834223 YP_001641396.1 CDS Mext_3954 NC_010172.1 4391713 4392204 D PFAM: GCN5-related N-acetyltransferase; KEGG: sus:Acid_2411 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4391713..4392204 Methylobacterium extorquens PA1 5834224 YP_001641397.1 CDS Mext_3955 NC_010172.1 4392285 4393676 D PFAM: Citrate transporter; KEGG: xau:Xaut_4755 citrate transporter; citrate transporter 4392285..4393676 Methylobacterium extorquens PA1 5835640 YP_001641398.1 CDS Mext_3956 NC_010172.1 4393838 4395154 D involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 4393838..4395154 Methylobacterium extorquens PA1 5835641 YP_001641399.1 CDS Mext_3957 NC_010172.1 4395271 4396332 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: gox:GOX0911 putative oxidoreductase; NAD-dependent epimerase/dehydratase 4395271..4396332 Methylobacterium extorquens PA1 5835642 YP_001641400.1 CDS Mext_3958 NC_010172.1 4396373 4398088 R PFAM: fumarate lyase; KEGG: hch:HCH_01841 aspartate ammonia-lyase; fumarate lyase complement(4396373..4398088) Methylobacterium extorquens PA1 5835643 YP_001641401.1 CDS Mext_3959 NC_010172.1 4398268 4399812 R KEGG: nwi:Nwi_0904 hypothetical protein; hypothetical protein complement(4398268..4399812) Methylobacterium extorquens PA1 5835644 YP_001641402.1 CDS Mext_3960 NC_010172.1 4400526 4402190 D PFAM: porin; KEGG: xau:Xaut_2286 porin; porin 4400526..4402190 Methylobacterium extorquens PA1 5835645 YP_001641403.1 CDS Mext_3961 NC_010172.1 4402392 4403303 D PFAM: extracellular solute-binding protein family 3; KEGG: rru:Rru_A2087 extracellular solute-binding protein, family 3; extracellular solute-binding protein 4402392..4403303 Methylobacterium extorquens PA1 5835618 YP_001641404.1 CDS Mext_3962 NC_010172.1 4403338 4404060 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A2088 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; polar amino acid ABC transporter inner membrane subunit 4403338..4404060 Methylobacterium extorquens PA1 5835619 YP_001641405.1 CDS Mext_3963 NC_010172.1 4404060 4404752 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_4372 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 4404060..4404752 Methylobacterium extorquens PA1 5835620 YP_001641406.1 CDS Mext_3964 NC_010172.1 4404779 4405555 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psb:Psyr_3911 ABC transporter; ABC transporter-like protein 4404779..4405555 Methylobacterium extorquens PA1 5835621 YP_001641407.1 CDS Mext_3965 NC_010172.1 4405644 4406585 R PFAM: protein of unknown function DUF606; KEGG: gbe:GbCGDNIH1_1401 hypothetical membrane spanning protein; hypothetical protein complement(4405644..4406585) Methylobacterium extorquens PA1 5835622 YP_001641408.1 CDS Mext_3966 NC_010172.1 4406632 4407900 R PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: bja:blr5272 arsenical pump membrane protein; arsenical pump membrane protein complement(4406632..4407900) Methylobacterium extorquens PA1 5835623 YP_001641409.1 CDS Mext_3967 NC_010172.1 4408288 4408563 D KEGG: ddi:DDB_0185120 hypothetical protein; hypothetical protein 4408288..4408563 Methylobacterium extorquens PA1 5835672 YP_001641410.1 CDS Mext_3968 NC_010172.1 4408904 4409620 R PFAM: Propeptide PepSY amd peptidase M4; peptidase complement(4408904..4409620) Methylobacterium extorquens PA1 5835673 YP_001641411.1 CDS Mext_3969 NC_010172.1 4409782 4410549 D PFAM: NUDIX hydrolase; KEGG: rca:Rcas_0387 NUDIX hydrolase; NUDIX hydrolase 4409782..4410549 Methylobacterium extorquens PA1 5835674 YP_001641412.1 CDS Mext_3970 NC_010172.1 4410551 4411531 D PFAM: band 7 protein; KEGG: kra:Krad_4132 band 7 protein; hypothetical protein 4410551..4411531 Methylobacterium extorquens PA1 5835675 YP_001641413.1 CDS Mext_3971 NC_010172.1 4411543 4412448 D KEGG: fal:FRAAL0513 hypothetical protein; hypothetical protein 4411543..4412448 Methylobacterium extorquens PA1 5835676 YP_001641414.1 CDS Mext_3972 NC_010172.1 4412671 4416777 D TIGRFAM: amino acid adenylation domain protein; non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; transferase hexapeptide repeat containing protein; KEGG: mag:amb1359 hypothetical protein; non-ribosomal peptide synthetase 4412671..4416777 Methylobacterium extorquens PA1 5835677 YP_001641415.1 CDS Mext_3973 NC_010172.1 4416800 4417174 D PFAM: protein of unknown function DUF891; KEGG: mmw:Mmwyl1_0353 protein of unknown function DUF891; hypothetical protein 4416800..4417174 Methylobacterium extorquens PA1 5835212 YP_001641416.1 CDS Mext_3974 NC_010172.1 4417171 4417458 D KEGG: sus:Acid_0970 transcriptional regulator, fis family; Fis family transcriptional regulator 4417171..4417458 Methylobacterium extorquens PA1 5835213 YP_001641417.1 CDS Mext_3975 NC_010172.1 4417496 4418152 R KEGG: xau:Xaut_4471 conserved hypothetical protein; putative alpha/beta hydrolase domain; hypothetical protein complement(4417496..4418152) Methylobacterium extorquens PA1 5835214 YP_001641418.1 CDS Mext_3976 NC_010172.1 4418413 4419585 D PFAM: aminotransferase class V; KEGG: bra:BRADO3539 cysteine desulfurase (nitrogenase metalloclusters biosynthesis protein NifS); class V aminotransferase 4418413..4419585 Methylobacterium extorquens PA1 5835215 YP_001641419.1 CDS Mext_3977 NC_010172.1 4419679 4421148 D TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: rpa:RPA2464 SufB, needed for FhuF Fe-S center stability; FeS assembly protein SufB 4419679..4421148 Methylobacterium extorquens PA1 5835216 YP_001641420.1 CDS Mext_3978 NC_010172.1 4421435 4422187 D KEGG: rpb:RPB_2992 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC 4421435..4422187 Methylobacterium extorquens PA1 5835217 YP_001641421.1 CDS Mext_3979 NC_010172.1 4422187 4423509 D TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: xau:Xaut_4467 FeS assembly protein SufD; FeS assembly protein SufD 4422187..4423509 Methylobacterium extorquens PA1 5835592 YP_001641422.1 CDS Mext_3980 NC_010172.1 4423765 4425021 D TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bra:BRADO3544 cysteine desulfurase; SufS subfamily cysteine desulfurase 4423765..4425021 Methylobacterium extorquens PA1 5835593 YP_001641423.1 CDS Mext_3981 NC_010172.1 4425072 4425455 D TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59; KEGG: mlo:mlr0023 hypothetical protein; FeS assembly SUF system protein 4425072..4425455 Methylobacterium extorquens PA1 5835594 YP_001641424.1 CDS Mext_3982 NC_010172.1 4425723 4426103 D TIGRFAM: iron-sulfur cluster assembly accessory protein; FeS assembly scaffold SufA; PFAM: HesB/YadR/YfhF-family protein; KEGG: rpb:RPB_2988 HesB/YadR/YfhF; FeS assembly scaffold SufA 4425723..4426103 Methylobacterium extorquens PA1 5835595 YP_001641425.1 CDS Mext_3983 NC_010172.1 4426158 4427267 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_2834 diguanylate cyclase (GGDEF domain); diguanylate cyclase complement(4426158..4427267) Methylobacterium extorquens PA1 5835596 YP_001641426.1 CDS Mext_3984 NC_010172.1 4427465 4429024 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: xau:Xaut_4759 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase complement(4427465..4429024) Methylobacterium extorquens PA1 5835597 YP_001641427.1 CDS Mext_3985 NC_010172.1 4429329 4429568 R hypothetical protein complement(4429329..4429568) Methylobacterium extorquens PA1 5832076 YP_001641428.1 CDS Mext_3986 NC_010172.1 4429923 4430789 D PFAM: porin; KEGG: xau:Xaut_2467 porin; porin 4429923..4430789 Methylobacterium extorquens PA1 5832077 YP_001641429.1 CDS Mext_3987 NC_010172.1 4431454 4431858 D KEGG: bbt:BBta_7106 hypothetical protein; hypothetical protein 4431454..4431858 Methylobacterium extorquens PA1 5832078 YP_001641430.1 CDS Mext_3988 NC_010172.1 4431905 4432288 D KEGG: bra:BRADO3284 hypothetical protein; putative signal peptide; hypothetical protein 4431905..4432288 Methylobacterium extorquens PA1 5832079 YP_001641431.1 CDS Mext_3989 NC_010172.1 4432351 4432752 D KEGG: pst:PSPTO_3129 hypothetical protein; hypothetical protein 4432351..4432752 Methylobacterium extorquens PA1 5832080 YP_001641432.1 CDS Mext_3990 NC_010172.1 4432951 4433241 D hypothetical protein 4432951..4433241 Methylobacterium extorquens PA1 5832081 YP_001641433.1 CDS Mext_3991 NC_010172.1 4433256 4433927 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: afw:Anae109_0220 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 4433256..4433927 Methylobacterium extorquens PA1 5835661 YP_001641434.1 CDS Mext_3992 NC_010172.1 4434066 4434272 D hypothetical protein 4434066..4434272 Methylobacterium extorquens PA1 5835662 YP_001641435.1 CDS Mext_3993 NC_010172.1 4434395 4435177 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO0399 putative ABC transporter, ATP-binding protein; ABC transporter-like protein complement(4434395..4435177) Methylobacterium extorquens PA1 5835663 YP_001641436.1 CDS Mext_3994 NC_010172.1 4435289 4435939 D PFAM: lipolytic protein G-D-S-L family; KEGG: rpe:RPE_0303 lipolytic enzyme, G-D-S-L family; GDSL family lipase 4435289..4435939 Methylobacterium extorquens PA1 5835664 YP_001641437.1 CDS Mext_3995 NC_010172.1 4435946 4436512 D TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: rpa:RPA0194 2'_5' RNA ligase; 2'-5' RNA ligase 4435946..4436512 Methylobacterium extorquens PA1 5835665 YP_001641438.1 CDS Mext_3996 NC_010172.1 4436790 4437170 D TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: bja:bsl5417 preprotein translocase; preprotein translocase subunit SecE 4436790..4437170 Methylobacterium extorquens PA1 5833403 YP_001641439.1 CDS Mext_3997 NC_010172.1 4437214 4437747 D TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: sme:SMc01322 probable transcription antitermination protein; transcription termination/antitermination factor NusG 4437214..4437747 Methylobacterium extorquens PA1 5833404 YP_001641440.1 CDS rplK NC_010172.1 4437980 4438429 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 4437980..4438429 Methylobacterium extorquens PA1 5833405 YP_001641441.1 CDS rplA NC_010172.1 4438441 4439139 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 4438441..4439139 Methylobacterium extorquens PA1 5833406 YP_001641442.1 CDS Mext_4000 NC_010172.1 4439459 4440697 R PFAM: cytochrome P450; KEGG: mxa:MXAN_4127 cytochrome P450 family protein; cytochrome P450 complement(4439459..4440697) Methylobacterium extorquens PA1 5832784 YP_001641443.1 CDS Mext_4001 NC_010172.1 4440702 4441964 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mba:Mbar_A1946 putative ferredoxin reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(4440702..4441964) Methylobacterium extorquens PA1 5832785 YP_001641444.1 CDS Mext_4002 NC_010172.1 4441961 4442182 R KEGG: rha:RHA1_ro02508 ferredoxin protein; ferredoxin protein complement(4441961..4442182) Methylobacterium extorquens PA1 5832786 YP_001641445.1 CDS Mext_4003 NC_010172.1 4442337 4443419 R PFAM: acyltransferase 3; KEGG: mxa:MXAN_1041 acyltransferase family protein; acyltransferase 3 complement(4442337..4443419) Methylobacterium extorquens PA1 5832787 YP_001641446.1 CDS Mext_4004 NC_010172.1 4443416 4444399 R PFAM: glycosyl transferase family 2; KEGG: pla:Plav_3344 glycosyl transferase family 2; glycosyl transferase family protein complement(4443416..4444399) Methylobacterium extorquens PA1 5832788 YP_001641447.1 CDS Mext_4005 NC_010172.1 4444449 4446293 R TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: rpa:RPA3043 aspartyl-tRNA synthetase; aspartyl-tRNA synthetase complement(4444449..4446293) Methylobacterium extorquens PA1 5832789 YP_001641448.1 CDS Mext_4006 NC_010172.1 4446365 4447372 R KEGG: syf:Synpcc7942_0419 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase complement(4446365..4447372) Methylobacterium extorquens PA1 5831487 YP_001641449.1 CDS Mext_4007 NC_010172.1 4447566 4447952 D hypothetical protein 4447566..4447952 Methylobacterium extorquens PA1 5831488 YP_001641450.1 CDS Mext_4008 NC_010172.1 4448203 4449087 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pol:Bpro_3959 5-carboxymethyl-2-hydroxymuconate delta-isomerase; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase complement(4448203..4449087) Methylobacterium extorquens PA1 5831489 YP_001641451.1 CDS Mext_4009 NC_010172.1 4449341 4450666 D PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: xau:Xaut_4441 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 4449341..4450666 Methylobacterium extorquens PA1 5831490 YP_001641452.1 CDS Mext_4010 NC_010172.1 4450824 4451624 R PFAM: Prephenate dehydrogenase; KEGG: oan:Oant_3943 prephenate dehydrogenase; prephenate dehydrogenase complement(4450824..4451624) Methylobacterium extorquens PA1 5831491 YP_001641453.1 CDS Mext_4011 NC_010172.1 4452025 4454478 D KEGG: ccr:CC_0091 sensory box/GGDEF family protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; diguanylate cyclase 4452025..4454478 Methylobacterium extorquens PA1 5831492 YP_001641454.1 CDS Mext_4012 NC_010172.1 4454579 4456222 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bbt:BBta_2962 hypothetical protein; radical SAM domain-containing protein complement(4454579..4456222) Methylobacterium extorquens PA1 5832355 YP_001641455.1 CDS Mext_4013 NC_010172.1 4456997 4458505 D PFAM: phosphate-selective porin O and P; KEGG: nar:Saro_2588 phosphate-selective porin O and P; phosphate-selective porin O and P 4456997..4458505 Methylobacterium extorquens PA1 5832356 YP_001641456.1 CDS rplJ NC_010172.1 4459372 4459890 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 4459372..4459890 Methylobacterium extorquens PA1 5832358 YP_001641457.1 CDS rplL NC_010172.1 4459948 4460325 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 4459948..4460325 Methylobacterium extorquens PA1 5832359 YP_001641458.1 CDS rpoB NC_010172.1 4460587 4464717 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 4460587..4464717 Methylobacterium extorquens PA1 5832360 YP_001641459.1 CDS Mext_4018 NC_010172.1 4464896 4469113 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 4464896..4469113 Methylobacterium extorquens PA1 5832824 YP_001641460.1 CDS Mext_4019 NC_010172.1 4469347 4470450 R PFAM: extracellular solute-binding protein family 1; KEGG: bbt:BBta_3516 putrescine ABC transporter, periplasmic binding protein; extracellular solute-binding protein complement(4469347..4470450) Methylobacterium extorquens PA1 5832825 YP_001641461.1 CDS Mext_4020 NC_010172.1 4470447 4470806 R PFAM: Endoribonuclease L-PSP; KEGG: bja:bll1127 hypothetical protein; endoribonuclease L-PSP complement(4470447..4470806) Methylobacterium extorquens PA1 5832826 YP_001641462.1 CDS Mext_4021 NC_010172.1 4471057 4471323 D PFAM: Transglycosylase-associated protein; KEGG: rpc:RPC_2982 transglycosylase-associated protein; transglycosylase-associated protein 4471057..4471323 Methylobacterium extorquens PA1 5832827 YP_001641463.1 CDS Mext_4022 NC_010172.1 4471433 4472326 R PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: yen:YE1738 hypothetical protein; NmrA family protein complement(4471433..4472326) Methylobacterium extorquens PA1 5832828 YP_001641464.1 CDS Mext_4023 NC_010172.1 4472404 4472895 D PFAM: helix-turn-helix HxlR type; KEGG: rpb:RPB_2619 putative transcriptional regulator; helix-turn-helix HxlR type protein 4472404..4472895 Methylobacterium extorquens PA1 5832829 YP_001641465.1 CDS Mext_4024 NC_010172.1 4472952 4473191 R hypothetical protein complement(4472952..4473191) Methylobacterium extorquens PA1 5833626 YP_001641466.1 CDS Mext_4025 NC_010172.1 4473267 4473908 R PFAM: Glutathione S-transferase domain; KEGG: sal:Sala_2778 glutathione S-transferase-like protein; glutathione S-transferase domain-containing protein complement(4473267..4473908) Methylobacterium extorquens PA1 5833627 YP_001641467.1 CDS Mext_4026 NC_010172.1 4474001 4476268 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_3292 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(4474001..4476268) Methylobacterium extorquens PA1 5833628 YP_001641468.1 CDS Mext_4027 NC_010172.1 4476489 4478747 R KEGG: rpa:RPA0432 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase complement(4476489..4478747) Methylobacterium extorquens PA1 5833629 YP_001641469.1 CDS rpsO NC_010172.1 4478996 4479265 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(4478996..4479265) Methylobacterium extorquens PA1 5833630 YP_001641470.1 CDS Mext_4029 NC_010172.1 4479565 4481031 D PFAM: amino acid permease-associated region; KEGG: gvi:gll1666 probable amino acid transporter; amino acid permease-associated protein 4479565..4481031 Methylobacterium extorquens PA1 5833631 YP_001641471.1 CDS Mext_4030 NC_010172.1 4481277 4482086 R TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: nha:Nham_0092 exodeoxyribonuclease III (xth); exodeoxyribonuclease III Xth complement(4481277..4482086) Methylobacterium extorquens PA1 5835284 YP_001641472.1 CDS Mext_4031 NC_010172.1 4482155 4482601 R PFAM: BLUF domain protein; KEGG: rpa:RPA0522 possible activator of photopigment and puc with BLUF domain; BLUF domain-containing protein complement(4482155..4482601) Methylobacterium extorquens PA1 5835285 YP_001641473.1 CDS Mext_4032 NC_010172.1 4482618 4484303 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: bja:bll5864 hypothetical protein; diguanylate cyclase complement(4482618..4484303) Methylobacterium extorquens PA1 5835286 YP_001641474.1 CDS Mext_4033 NC_010172.1 4484522 4485469 R PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: xau:Xaut_1840 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA complement(4484522..4485469) Methylobacterium extorquens PA1 5835287 YP_001641475.1 CDS Mext_4034 NC_010172.1 4485669 4489073 R PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: smd:Smed_4194 cell divisionFtsK/SpoIIIE; cell division protein FtsK complement(4485669..4489073) Methylobacterium extorquens PA1 5835288 YP_001641476.1 CDS nadE NC_010172.1 4489382 4491454 D catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 4489382..4491454 Methylobacterium extorquens PA1 5835289 YP_001641477.1 CDS Mext_4036 NC_010172.1 4491479 4491943 R LovR from Caulobacter crescentus is a response regulator part of a two-component signaling system that regulates photosensitive bacterial cell-surface and cell-cell attachment; response regulator complement(4491479..4491943) Methylobacterium extorquens PA1 5834364 YP_001641478.1 CDS Mext_4037 NC_010172.1 4492077 4493177 R KEGG: ccr:CC_0285 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein complement(4492077..4493177) Methylobacterium extorquens PA1 5834365 YP_001641479.1 CDS Mext_4038 NC_010172.1 4493569 4495017 D PFAM: major facilitator superfamily MFS_1; KEGG: pla:Plav_3596 major facilitator superfamily MFS_1; major facilitator transporter 4493569..4495017 Methylobacterium extorquens PA1 5834366 YP_001641480.1 CDS Mext_4039 NC_010172.1 4495014 4495940 D KEGG: eba:ebA2553 hypothetical protein; hypothetical protein 4495014..4495940 Methylobacterium extorquens PA1 5834367 YP_001641481.1 CDS Mext_4040 NC_010172.1 4495950 4497134 R KEGG: jan:Jann_3601 hypothetical protein; hypothetical protein complement(4495950..4497134) Methylobacterium extorquens PA1 5834368 YP_001641482.1 CDS Mext_4041 NC_010172.1 4497215 4497820 D PFAM: NnrUfamily protein; KEGG: rpb:RPB_2444 NnrU; NnrU family protein 4497215..4497820 Methylobacterium extorquens PA1 5834369 YP_001641483.1 CDS Mext_4042 NC_010172.1 4498210 4498920 D KEGG: bbt:BBta_3774 hypothetical protein; hypothetical protein 4498210..4498920 Methylobacterium extorquens PA1 5834512 YP_001641484.1 CDS engA NC_010172.1 4499007 4500347 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 4499007..4500347 Methylobacterium extorquens PA1 5834513 YP_001641485.1 CDS Mext_4044 NC_010172.1 4500501 4501418 D PFAM: protein of unknown function DUF81; KEGG: pap:PSPA7_5761 hypothetical protein; hypothetical protein 4500501..4501418 Methylobacterium extorquens PA1 5834514 YP_001641486.1 CDS Mext_4045 NC_010172.1 4501422 4502546 R PFAM: glutamate--cysteine ligase GCS2; KEGG: xau:Xaut_4105 glutamate--cysteine ligase GCS2; glutamate--cysteine ligase complement(4501422..4502546) Methylobacterium extorquens PA1 5834515 YP_001641487.1 CDS Mext_4046 NC_010172.1 4502787 4503686 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 4502787..4503686 Methylobacterium extorquens PA1 5834516 YP_001641488.1 CDS Mext_4047 NC_010172.1 4503853 4504110 D hypothetical protein 4503853..4504110 Methylobacterium extorquens PA1 5834517 YP_001641489.1 CDS Mext_4048 NC_010172.1 4504256 4504720 D PFAM: protein of unknown function UPF0074; KEGG: pla:Plav_0970 transcriptional regulator, BadM/Rrf2 family; hypothetical protein 4504256..4504720 Methylobacterium extorquens PA1 5833161 YP_001641490.1 CDS Mext_4049 NC_010172.1 4504710 4505618 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: oan:Oant_3585 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4504710..4505618 Methylobacterium extorquens PA1 5833162 YP_001641491.1 CDS Mext_4050 NC_010172.1 4505907 4507466 D PFAM: beta-lactamase; KEGG: mlo:mll2003 hypothetical protein; beta-lactamase 4505907..4507466 Methylobacterium extorquens PA1 5833163 YP_001641492.1 CDS Mext_4051 NC_010172.1 4507558 4509909 R KEGG: rpa:RPA0981 sensor histidine kinase with multiple PAS and a response regulator receiver domain; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein complement(4507558..4509909) Methylobacterium extorquens PA1 5833164 YP_001641493.1 CDS Mext_4052 NC_010172.1 4510015 4510743 R KEGG: pol:Bpro_3007 glutathione S-transferase-like; glutathione S-transferase-like protein complement(4510015..4510743) Methylobacterium extorquens PA1 5833165 YP_001641494.1 CDS Mext_4053 NC_010172.1 4510763 4511440 R PFAM: protein of unknown function DUF937; KEGG: reh:H16_A3150 hypothetical protein; hypothetical protein complement(4510763..4511440) Methylobacterium extorquens PA1 5832859 YP_001641495.1 CDS Mext_4054 NC_010172.1 4511530 4511841 R hypothetical protein complement(4511530..4511841) Methylobacterium extorquens PA1 5832860 YP_001641496.1 CDS Mext_4055 NC_010172.1 4511959 4514685 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(4511959..4514685) Methylobacterium extorquens PA1 5832861 YP_001641497.1 CDS Mext_4056 NC_010172.1 4515053 4515439 D PFAM: PilT protein domain protein; KEGG: hha:Hhal_0789 PilT protein domain protein; PilT domain-containing protein 4515053..4515439 Methylobacterium extorquens PA1 5832862 YP_001641498.1 CDS Mext_4057 NC_010172.1 4515446 4516063 R PFAM: LysR substrate-binding; KEGG: bbt:BBta_6129 putative transcriptional regulatory protein, LysR family; LysR substrate-binding protein complement(4515446..4516063) Methylobacterium extorquens PA1 5832863 YP_001641499.1 CDS Mext_4058 NC_010172.1 4516186 4516356 R KEGG: gox:GOX2137 transcriptional regulator; hypothetical protein complement(4516186..4516356) Methylobacterium extorquens PA1 5832864 YP_001641500.1 CDS Mext_4059 NC_010172.1 4516478 4516873 D PFAM: DoxX family protein; KEGG: bbt:BBta_6128 putative membrane protein of unknown function with DoxD-like family protein domain; DoxX family protein 4516478..4516873 Methylobacterium extorquens PA1 5833415 YP_001641501.1 CDS Mext_4060 NC_010172.1 4516899 4517396 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpb:RPB_4677 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4516899..4517396 Methylobacterium extorquens PA1 5833416 YP_001641502.1 CDS Mext_4061 NC_010172.1 4517475 4518140 D KEGG: bja:blr0850 hypothetical protein; hypothetical protein 4517475..4518140 Methylobacterium extorquens PA1 5833417 YP_001641503.1 CDS Mext_4062 NC_010172.1 4518127 4518570 D KEGG: bja:blr0851 hypothetical protein; hypothetical protein 4518127..4518570 Methylobacterium extorquens PA1 5833418 YP_001641504.1 CDS Mext_4063 NC_010172.1 4518642 4519352 D catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 4518642..4519352 Methylobacterium extorquens PA1 5833419 YP_001641505.1 CDS Mext_4064 NC_010172.1 4519442 4520968 D KEGG: rpd:RPD_0062 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 4519442..4520968 Methylobacterium extorquens PA1 5831643 YP_001641506.1 CDS Mext_4065 NC_010172.1 4520995 4521579 D PFAM: Ankyrin; KEGG: ppf:Pput_3876 ankyrin; ankyrin 4520995..4521579 Methylobacterium extorquens PA1 5831644 YP_001641507.1 CDS Mext_4066 NC_010172.1 4521667 4523172 D TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: oan:Oant_1086 glycerol kinase; glycerol kinase 4521667..4523172 Methylobacterium extorquens PA1 5831645 YP_001641508.1 CDS Mext_4067 NC_010172.1 4523172 4524335 D PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_4720 alpha/beta hydrolase fold; hypothetical protein 4523172..4524335 Methylobacterium extorquens PA1 5831646 YP_001641509.1 CDS Mext_4068 NC_010172.1 4524451 4526226 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bra:BRADO6566 putative methyl-accepting chemotaxis protein; chemotaxis sensory transducer protein 4524451..4526226 Methylobacterium extorquens PA1 5831647 YP_001641510.1 CDS Mext_4069 NC_010172.1 4526292 4527053 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: nha:Nham_2449 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(4526292..4527053) Methylobacterium extorquens PA1 5831648 YP_001641511.1 CDS Mext_4070 NC_010172.1 4527050 4527538 R PFAM: Endoribonuclease L-PSP; KEGG: bja:blr5132 hypothetical protein; endoribonuclease L-PSP complement(4527050..4527538) Methylobacterium extorquens PA1 5831067 YP_001641512.1 CDS Mext_4071 NC_010172.1 4527603 4529774 R PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: oan:Oant_2167 ABC transporter related; ABC transporter-like protein complement(4527603..4529774) Methylobacterium extorquens PA1 5831068 YP_001641513.1 CDS Mext_4072 NC_010172.1 4529771 4531060 R KEGG: oan:Oant_2166 secretion protein HlyD family protein; secretion protein HlyD family protein complement(4529771..4531060) Methylobacterium extorquens PA1 5831069 YP_001641514.1 CDS Mext_4073 NC_010172.1 4531441 4532007 R hypothetical protein complement(4531441..4532007) Methylobacterium extorquens PA1 5831070 YP_001641515.1 CDS Mext_4074 NC_010172.1 4532070 4532972 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mlo:mlr1270 probable transcriptional regulator; helix-turn-helix domain-containing protein 4532070..4532972 Methylobacterium extorquens PA1 5831071 YP_001641516.1 CDS Mext_4075 NC_010172.1 4533186 4534376 D TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mlo:mlr5646 acetylornithine aminotransferase; acetylornithine and succinylornithine aminotransferase 4533186..4534376 Methylobacterium extorquens PA1 5831018 YP_001641517.1 CDS Mext_4076 NC_010172.1 4534363 4535355 D TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: nwi:Nwi_0514 ornithine carbamoyltransferase; ornithine carbamoyltransferase 4534363..4535355 Methylobacterium extorquens PA1 5831019 YP_001641518.1 CDS Mext_4077 NC_010172.1 4535792 4536259 R PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: pol:Bpro_4120 hypothetical protein; activator of Hsp90 ATPase 1 family protein complement(4535792..4536259) Methylobacterium extorquens PA1 5831020 YP_001641519.1 CDS Mext_4078 NC_010172.1 4536279 4536722 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: rle:RL4704 putative glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(4536279..4536722) Methylobacterium extorquens PA1 5831021 YP_001641520.1 CDS Mext_4079 NC_010172.1 4536988 4537794 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xac:XAC2129 3-ketoacyl-acyl carrier protein reductase; short-chain dehydrogenase/reductase SDR 4536988..4537794 Methylobacterium extorquens PA1 5831022 YP_001641521.1 CDS Mext_4080 NC_010172.1 4537798 4539180 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: cvi:CV_2037 dihydrolipoamide dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4537798..4539180 Methylobacterium extorquens PA1 5831023 YP_001641522.1 CDS Mext_4081 NC_010172.1 4539344 4542031 D PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; Phytochrome central region domain protein; PAS fold-2 domain protein; PAS fold domain protein; KEGG: ava:Ava_1003 multi-sensor signal transduction histidine kinase; histidine kinase dimerisation/phosphoacceptor 4539344..4542031 Methylobacterium extorquens PA1 5832962 YP_001641523.1 CDS Mext_4082 NC_010172.1 4542039 4542596 D PFAM: Haem oxygenase; KEGG: pen:PSEEN1837 heme oxygenase BphO; heme oxygenase 4542039..4542596 Methylobacterium extorquens PA1 5832963 YP_001641524.1 CDS Mext_4083 NC_010172.1 4542662 4543825 R KEGG: acr:Acry_0122 hypothetical protein; hypothetical protein complement(4542662..4543825) Methylobacterium extorquens PA1 5832964 YP_001641525.1 CDS Mext_4084 NC_010172.1 4543818 4544222 R KEGG: nha:Nham_2927 hypothetical protein; hypothetical protein complement(4543818..4544222) Methylobacterium extorquens PA1 5832965 YP_001641526.1 CDS Mext_4085 NC_010172.1 4544568 4545914 D KEGG: xau:Xaut_3812 capsule polysaccharide export protein-like protein; capsule polysaccharide export protein-like protein 4544568..4545914 Methylobacterium extorquens PA1 5832966 YP_001641527.1 CDS Mext_4086 NC_010172.1 4546069 4546353 D hypothetical protein 4546069..4546353 Methylobacterium extorquens PA1 5831734 YP_001641528.1 CDS Mext_4087 NC_010172.1 4546545 4547525 D KEGG: bja:blr3114 hypothetical protein; hypothetical protein 4546545..4547525 Methylobacterium extorquens PA1 5831735 YP_001641529.1 CDS Mext_4088 NC_010172.1 4547558 4548931 R PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rpa:RPA1268 two-component flagellar transcriptional activator FlbD, fis-type; sigma-54 factor interaction domain-containing protein complement(4547558..4548931) Methylobacterium extorquens PA1 5831736 YP_001641530.1 CDS Mext_4089 NC_010172.1 4549085 4549432 R TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bra:BRADO5902 flagellar motor switch protein; flagellar motor switch protein FliN complement(4549085..4549432) Methylobacterium extorquens PA1 5831737 YP_001641531.1 CDS fliH NC_010172.1 4549438 4550064 R binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H complement(4549438..4550064) Methylobacterium extorquens PA1 5831738 YP_001641532.1 CDS fliG NC_010172.1 4550061 4551116 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(4550061..4551116) Methylobacterium extorquens PA1 5831739 YP_001641533.1 CDS fliF NC_010172.1 4551160 4552782 R the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein complement(4551160..4552782) Methylobacterium extorquens PA1 5832515 YP_001641534.1 CDS Mext_4093 NC_010172.1 4553043 4553318 R PFAM: protein of unknown function DUF1153; KEGG: bov:BOV_1536 hypothetical protein; hypothetical protein complement(4553043..4553318) Methylobacterium extorquens PA1 5832516 YP_001641535.1 CDS Mext_4094 NC_010172.1 4553460 4554140 R PFAM: flagellar hook capping protein; KEGG: bbt:BBta_1878 putative flagellar basal-body rod modification protein FlgD; flagellar hook capping protein complement(4553460..4554140) Methylobacterium extorquens PA1 5832517 YP_001641536.1 CDS Mext_4095 NC_010172.1 4554150 4555541 R PFAM: flagellar hook-length control protein; KEGG: rpa:RPA1305 possible flagellar hook length determination protein; flagellar hook-length control protein complement(4554150..4555541) Methylobacterium extorquens PA1 5832518 YP_001641537.1 CDS mnmA NC_010172.1 4555800 4557032 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 4555800..4557032 Methylobacterium extorquens PA1 5832519 YP_001641538.1 CDS Mext_4097 NC_010172.1 4557288 4557944 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: xau:Xaut_0403 phosphatidylethanolamine N-methyltransferase; phosphatidylethanolamine N-methyltransferase 4557288..4557944 Methylobacterium extorquens PA1 5831406 YP_001641539.1 CDS Mext_4098 NC_010172.1 4557983 4558831 D PFAM: SNARE associated Golgi protein; KEGG: pla:Plav_0303 SNARE associated Golgi protein; hypothetical protein 4557983..4558831 Methylobacterium extorquens PA1 5831407 YP_001641540.1 CDS Mext_4099 NC_010172.1 4558954 4560489 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: nha:Nham_3706 histidine kinase; ATPase domain-containing protein 4558954..4560489 Methylobacterium extorquens PA1 5831408 YP_001641541.1 CDS Mext_4100 NC_010172.1 4560554 4561294 R PFAM: carbonic anhydrase; KEGG: pst:PSPTO_1340 carbonic anhydrase; carbonic anhydrase complement(4560554..4561294) Methylobacterium extorquens PA1 5831409 YP_001641542.1 CDS Mext_4101 NC_010172.1 4561604 4563181 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_1513 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter complement(4561604..4563181) Methylobacterium extorquens PA1 5831410 YP_001641543.1 CDS Mext_4102 NC_010172.1 4563377 4564582 R PFAM: secretion protein HlyD family protein; KEGG: xau:Xaut_1512 secretion protein HlyD family protein; secretion protein HlyD family protein complement(4563377..4564582) Methylobacterium extorquens PA1 5831411 YP_001641544.1 CDS Mext_4103 NC_010172.1 4564723 4565385 D PFAM: regulatory protein TetR; KEGG: xau:Xaut_1511 transcriptional regulator, TetR family; regulatory protein TetR 4564723..4565385 Methylobacterium extorquens PA1 5832568 YP_001641545.1 CDS Mext_4104 NC_010172.1 4565392 4567155 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: nwi:Nwi_0637 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(4565392..4567155) Methylobacterium extorquens PA1 5832569 YP_001641546.1 CDS Mext_4105 NC_010172.1 4567266 4568255 D TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: rpd:RPD_1247 SUA5/YciO/YrdC/YwlC; Sua5/YciO/YrdC/YwlC family protein 4567266..4568255 Methylobacterium extorquens PA1 5832570 YP_001641547.1 CDS Mext_4106 NC_010172.1 4568299 4568802 R hypothetical protein complement(4568299..4568802) Methylobacterium extorquens PA1 5832571 YP_001641548.1 CDS Mext_4107 NC_010172.1 4569163 4570926 R KEGG: rpc:RPC_0560 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS sensor protein complement(4569163..4570926) Methylobacterium extorquens PA1 5832572 YP_001641549.1 CDS Mext_4108 NC_010172.1 4570916 4571236 R PFAM: KaiB domain protein; KEGG: rsp:RSP_3983 circadian clock KaiB-like protein; KaiB domain-containing protein complement(4570916..4571236) Methylobacterium extorquens PA1 5834268 YP_001641550.1 CDS Mext_4109 NC_010172.1 4571233 4571625 R PFAM: KaiB domain protein; KEGG: mma:MM_1091 thiol-disulfide isomerase; KaiB domain-containing protein complement(4571233..4571625) Methylobacterium extorquens PA1 5834269 YP_001641551.1 CDS Mext_4110 NC_010172.1 4571622 4573349 R acts as a promotor non-specific transcription repressor; circadian clock protein KaiC complement(4571622..4573349) Methylobacterium extorquens PA1 5834270 YP_001641552.1 CDS Mext_4111 NC_010172.1 4573339 4573569 R hypothetical protein complement(4573339..4573569) Methylobacterium extorquens PA1 5834271 YP_001641553.1 CDS Mext_4112 NC_010172.1 4573766 4574152 D PFAM: response regulator receiver; KEGG: rpa:RPA1481 response regulator receiver (CheY-like protein); response regulator receiver 4573766..4574152 Methylobacterium extorquens PA1 5834272 YP_001641554.1 CDS Mext_4113 NC_010172.1 4574175 4575521 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rpa:RPA4816 two component sensor histidine kinase; ATPase domain-containing protein complement(4574175..4575521) Methylobacterium extorquens PA1 5834273 YP_001641555.1 CDS Mext_4114 NC_010172.1 4575518 4576183 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mlo:mlr6617 two-component system, regulatory protein; response regulator receiver complement(4575518..4576183) Methylobacterium extorquens PA1 5834846 YP_001641556.1 CDS Mext_4115 NC_010172.1 4576208 4576540 R KEGG: mlo:mlr6616 hypothetical protein; hypothetical protein complement(4576208..4576540) Methylobacterium extorquens PA1 5834847 YP_001641557.1 CDS Mext_4116 NC_010172.1 4576707 4577336 D PFAM: nuclease (SNase domain protein); KEGG: xac:XAC3258 succinoglycan biosynthesis protein; nuclease 4576707..4577336 Methylobacterium extorquens PA1 5834848 YP_001641558.1 CDS Mext_4117 NC_010172.1 4577352 4577645 R hypothetical protein complement(4577352..4577645) Methylobacterium extorquens PA1 5834849 YP_001641559.1 CDS Mext_4118 NC_010172.1 4577645 4577995 R KEGG: bbr:BB3603 putative iron uptake protein; putative iron uptake protein complement(4577645..4577995) Methylobacterium extorquens PA1 5834850 YP_001641560.1 CDS Mext_4119 NC_010172.1 4577992 4579584 R PFAM: PepSY-associated TM helix domain protein; KEGG: reh:H16_B0118 uncharacterized iron-regulated membrane protein; PepSY-associated TM helix domain-containing protein complement(4577992..4579584) Methylobacterium extorquens PA1 5833972 YP_001641561.1 CDS Mext_4120 NC_010172.1 4579581 4579895 R KEGG: reh:H16_B0117 putative iron uptake protein; putative iron uptake protein complement(4579581..4579895) Methylobacterium extorquens PA1 5833973 YP_001641562.1 CDS Mext_4121 NC_010172.1 4579905 4582262 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bpa:BPP3206 putative ferric siderophore receptor; TonB-dependent siderophore receptor complement(4579905..4582262) Methylobacterium extorquens PA1 5833974 YP_001641563.1 CDS Mext_4122 NC_010172.1 4582504 4582782 R hypothetical protein complement(4582504..4582782) Methylobacterium extorquens PA1 5833975 YP_001641564.1 CDS Mext_4124 NC_010172.1 4584139 4589700 D KEGG: par:Psyc_1601 hypothetical protein; hypothetical protein 4584139..4589700 Methylobacterium extorquens PA1 5833977 YP_001641565.1 CDS Mext_4125 NC_010172.1 4589778 4591301 D PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: bbt:BBta_7350 putative phosphomannomutase/phosphoglucomutase (PMM / PGM); phosphoglucomutase/phosphomannomutase alpha/beta/subunit 4589778..4591301 Methylobacterium extorquens PA1 5833616 YP_001641566.1 CDS Mext_4126 NC_010172.1 4591711 4593204 D PFAM: Hemolysin-type calcium-binding region; KEGG: rpe:RPE_3513 hemolysin-type calcium-binding region; hemolysin-type calcium-binding protein 4591711..4593204 Methylobacterium extorquens PA1 5833617 YP_001641567.1 CDS Mext_4127 NC_010172.1 4593581 4595008 D PFAM: Hemolysin-type calcium-binding region; KEGG: rpe:RPE_3513 hemolysin-type calcium-binding region; hemolysin-type calcium-binding protein 4593581..4595008 Methylobacterium extorquens PA1 5833618 YP_001641568.1 CDS Mext_4128 NC_010172.1 4595198 4595458 R hypothetical protein complement(4595198..4595458) Methylobacterium extorquens PA1 5833619 YP_001641569.1 CDS Mext_4129 NC_010172.1 4595458 4597662 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: ccr:CC_0164 hypothetical protein; lipopolysaccharide biosynthesis protein complement(4595458..4597662) Methylobacterium extorquens PA1 5833620 YP_001641570.1 CDS Mext_4130 NC_010172.1 4597733 4599256 R KEGG: rpe:RPE_3504 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase complement(4597733..4599256) Methylobacterium extorquens PA1 5833621 YP_001641571.1 CDS Mext_4131 NC_010172.1 4599317 4600318 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: rpe:RPE_3503 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(4599317..4600318) Methylobacterium extorquens PA1 5832258 YP_001641572.1 CDS Mext_4132 NC_010172.1 4600697 4601476 R KEGG: rpe:RPE_3494 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase complement(4600697..4601476) Methylobacterium extorquens PA1 5832259 YP_001641573.1 CDS Mext_4133 NC_010172.1 4601473 4602474 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: aeh:Mlg_2802 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(4601473..4602474) Methylobacterium extorquens PA1 5832260 YP_001641574.1 CDS Mext_4134 NC_010172.1 4602930 4604297 D PFAM: polysaccharide export protein; KEGG: rpe:RPE_3496 polysaccharide export protein; polysaccharide export protein 4602930..4604297 Methylobacterium extorquens PA1 5832261 YP_001641575.1 CDS Mext_4135 NC_010172.1 4604350 4605759 D KEGG: rpe:RPE_3497 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4604350..4605759 Methylobacterium extorquens PA1 5832262 YP_001641576.1 CDS Mext_4136 NC_010172.1 4605769 4606158 D hypothetical protein 4605769..4606158 Methylobacterium extorquens PA1 5833743 YP_001641577.1 CDS Mext_4137 NC_010172.1 4606344 4607021 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rpc:RPC_1904 two component transcriptional regulator, LuxR family; response regulator receiver complement(4606344..4607021) Methylobacterium extorquens PA1 5833744 YP_001641578.1 CDS Mext_4138 NC_010172.1 4607018 4607605 R KEGG: rpc:RPC_1906 hypothetical protein; hypothetical protein complement(4607018..4607605) Methylobacterium extorquens PA1 5833745 YP_001641579.1 CDS Mext_4139 NC_010172.1 4607602 4608546 R TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein; KEGG: xau:Xaut_0031 40-residue YVTN family beta-propeller repeat protein; hypothetical protein complement(4607602..4608546) Methylobacterium extorquens PA1 5833746 YP_001641580.1 CDS Mext_4140 NC_010172.1 4608571 4609101 R KEGG: rpc:RPC_1917 MxaD protein, putative; MxaD protein complement(4608571..4609101) Methylobacterium extorquens PA1 5833747 YP_001641581.1 CDS Mext_4141 NC_010172.1 4609101 4610108 R SMART: von Willebrand factor type A; KEGG: rpc:RPC_1916 von Willebrand factor, type A; von Willebrand factor type A complement(4609101..4610108) Methylobacterium extorquens PA1 5833748 YP_001641582.1 CDS Mext_4142 NC_010172.1 4610105 4610731 R KEGG: rpe:RPE_3131 hypothetical protein; hypothetical protein complement(4610105..4610731) Methylobacterium extorquens PA1 5832308 YP_001641583.1 CDS Mext_4143 NC_010172.1 4610731 4611798 R PFAM: von Willebrand factor type A; KEGG: rpc:RPC_1914 von Willebrand factor, type A; von Willebrand factor type A complement(4610731..4611798) Methylobacterium extorquens PA1 5832309 YP_001641584.1 CDS Mext_4144 NC_010172.1 4611803 4612726 R KEGG: rpc:RPC_1913 MxaA protein, putative; MxaA protein complement(4611803..4612726) Methylobacterium extorquens PA1 5832310 YP_001641585.1 CDS Mext_4145 NC_010172.1 4612732 4613601 R KEGG: rpc:RPC_1912 hypothetical protein; hypothetical protein complement(4612732..4613601) Methylobacterium extorquens PA1 5832311 YP_001641586.1 CDS Mext_4146 NC_010172.1 4613598 4614629 R PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rpc:RPC_1911 ATPase associated with various cellular activities, AAA_3; ATPase complement(4613598..4614629) Methylobacterium extorquens PA1 5832312 YP_001641587.1 CDS Mext_4147 NC_010172.1 4614778 4615068 R PFAM: methanol dehydrogenase beta subunit; KEGG: mca:MCA0782 methanol dehydrogenase, small subunit; methanol dehydrogenase subunit beta complement(4614778..4615068) Methylobacterium extorquens PA1 5832502 YP_001641588.1 CDS Mext_4148 NC_010172.1 4615174 4615791 R PFAM: cytochrome c class I; KEGG: pde:Pden_2995 cytochrome c, class I; cytochrome c class I complement(4615174..4615791) Methylobacterium extorquens PA1 5832503 YP_001641589.1 CDS Mext_4149 NC_010172.1 4615910 4616800 R SMART: extracellular solute-binding protein family 3; KEGG: gbe:GbCGDNIH1_0345 MoxJ protein precursor; extracellular solute-binding protein complement(4615910..4616800) Methylobacterium extorquens PA1 5832504 YP_001641590.1 CDS Mext_4150 NC_010172.1 4617081 4618961 R TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: rpc:RPC_1907 pyrrolo-quinoline quinone; methanol/ethanol family PQQ-dependent dehydrogenase complement(4617081..4618961) Methylobacterium extorquens PA1 5832505 YP_001641591.1 CDS Mext_4151 NC_010172.1 4619332 4620225 D hypothetical protein 4619332..4620225 Methylobacterium extorquens PA1 5832506 YP_001641592.1 CDS Mext_4152 NC_010172.1 4620374 4620571 D KEGG: rsh:Rsph17029_2577 hypothetical protein; hypothetical protein 4620374..4620571 Methylobacterium extorquens PA1 5832507 YP_001641593.1 CDS Mext_4153 NC_010172.1 4620708 4621439 R KEGG: rpb:RPB_2922 hypothetical protein; hypothetical protein complement(4620708..4621439) Methylobacterium extorquens PA1 5833118 YP_001641594.1 CDS Mext_4154 NC_010172.1 4621784 4622683 D PFAM: beta-lactamase domain protein; KEGG: smd:Smed_3996 beta-lactamase domain protein; beta-lactamase domain-containing protein 4621784..4622683 Methylobacterium extorquens PA1 5833119 YP_001641595.1 CDS Mext_4155 NC_010172.1 4622695 4623222 D KEGG: smd:Smed_3995 hypothetical protein; hypothetical protein 4622695..4623222 Methylobacterium extorquens PA1 5833120 YP_001641596.1 CDS Mext_4156 NC_010172.1 4623617 4625002 D TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: xau:Xaut_4419 nucleotidyl transferase; UDP-N-acetylglucosamine pyrophosphorylase 4623617..4625002 Methylobacterium extorquens PA1 5833121 YP_001641597.1 CDS Mext_4157 NC_010172.1 4625187 4627013 D TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: rpd:RPD_2618 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; glucosamine--fructose-6-phosphate aminotransferase 4625187..4627013 Methylobacterium extorquens PA1 5833122 YP_001641598.1 CDS Mext_4158 NC_010172.1 4627063 4627497 R PFAM: protein of unknown function DUF336; KEGG: mfa:Mfla_1444 protein of unknown function DUF336; hypothetical protein complement(4627063..4627497) Methylobacterium extorquens PA1 5833123 YP_001641599.1 CDS Mext_4159 NC_010172.1 4627679 4628524 D PFAM: protein of unknown function DUF502; KEGG: rpb:RPB_2853 protein of unknown function DUF502; hypothetical protein 4627679..4628524 Methylobacterium extorquens PA1 5835305 YP_001641600.1 CDS Mext_4160 NC_010172.1 4628547 4628873 R hypothetical protein complement(4628547..4628873) Methylobacterium extorquens PA1 5835306 YP_001641601.1 CDS Mext_4161 NC_010172.1 4629229 4631418 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(4629229..4631418) Methylobacterium extorquens PA1 5835307 YP_001641602.1 CDS Mext_4162 NC_010172.1 4631610 4631906 D PFAM: protein of unknown function DUF339; KEGG: smd:Smed_1400 protein of unknown function DUF339; hypothetical protein 4631610..4631906 Methylobacterium extorquens PA1 5835308 YP_001641603.1 CDS Mext_4163 NC_010172.1 4632136 4635726 D KEGG: xau:Xaut_4262 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; transcription-repair coupling factor 4632136..4635726 Methylobacterium extorquens PA1 5835309 YP_001641604.1 CDS Mext_4164 NC_010172.1 4636103 4636312 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ret:RHE_PF00130 putative cold shock protein; DNA-binding cold-shock protein 4636103..4636312 Methylobacterium extorquens PA1 5832026 YP_001641605.1 CDS Mext_4165 NC_010172.1 4636415 4636783 D KEGG: mes:Meso_3295 hypothetical protein; hypothetical protein 4636415..4636783 Methylobacterium extorquens PA1 5832027 YP_001641606.1 CDS Mext_4166 NC_010172.1 4636962 4637159 D hypothetical protein 4636962..4637159 Methylobacterium extorquens PA1 5832028 YP_001641607.1 CDS Mext_4167 NC_010172.1 4637226 4637549 R hypothetical protein complement(4637226..4637549) Methylobacterium extorquens PA1 5832029 YP_001641608.1 CDS Mext_4168 NC_010172.1 4637826 4639226 R KEGG: rpb:RPB_2848 acid-CoA ligase; Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein complement(4637826..4639226) Methylobacterium extorquens PA1 5832030 YP_001641609.1 CDS Mext_4169 NC_010172.1 4639470 4640777 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bra:BRADO1892 putative sensor histidine kinase with a response regulator receiver domain; ATPase domain-containing protein 4639470..4640777 Methylobacterium extorquens PA1 5832031 YP_001641610.1 CDS Mext_4170 NC_010172.1 4640977 4641339 D PFAM: response regulator receiver; KEGG: bja:blr5906 two-component hybrid sensor and regulator; response regulator receiver 4640977..4641339 Methylobacterium extorquens PA1 5832438 YP_001641611.1 CDS Mext_4171 NC_010172.1 4641395 4643026 R PFAM: AMP-dependent synthetase and ligase; KEGG: xau:Xaut_2463 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(4641395..4643026) Methylobacterium extorquens PA1 5832439 YP_001641612.1 CDS Mext_4172 NC_010172.1 4643165 4643359 R hypothetical protein complement(4643165..4643359) Methylobacterium extorquens PA1 5832440 YP_001641613.1 CDS Mext_4173 NC_010172.1 4643609 4645417 D PFAM: glycosyl transferase family 39; KEGG: xau:Xaut_4551 glycosyl transferase family 39; glycosyl transferase family protein 4643609..4645417 Methylobacterium extorquens PA1 5832441 YP_001641614.1 CDS Mext_4174 NC_010172.1 4645414 4646187 D PFAM: glycosyl transferase family 2; KEGG: rpa:RPA2557 glycosyl transferase, family 2; glycosyl transferase family protein 4645414..4646187 Methylobacterium extorquens PA1 5832442 YP_001641615.1 CDS Mext_4175 NC_010172.1 4646192 4646521 D PFAM: lipid A biosynthesis domain protein; KEGG: bbt:BBta_3920 putative membrane protein of unknown function with lipid A disaccharide synthase (N-term); lipid A biosynthesis domain-containing protein 4646192..4646521 Methylobacterium extorquens PA1 5832443 YP_001641616.1 CDS Mext_4176 NC_010172.1 4646537 4647004 D KEGG: gox:GOX0918 hypothetical protein; hypothetical protein 4646537..4647004 Methylobacterium extorquens PA1 5834312 YP_001641617.1 CDS Mext_4177 NC_010172.1 4647005 4648516 R KEGG: acr:Acry_1088 flavoprotein involved in K+ transport-like protein; cyclohexanone monooxygenase complement(4647005..4648516) Methylobacterium extorquens PA1 5834313 YP_001641618.1 CDS Mext_4178 NC_010172.1 4648513 4649448 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: acr:Acry_0629 alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase domain-containing protein complement(4648513..4649448) Methylobacterium extorquens PA1 5834314 YP_001641619.1 CDS Mext_4179 NC_010172.1 4649451 4650275 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_B5157 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4649451..4650275) Methylobacterium extorquens PA1 5834315 YP_001641620.1 CDS Mext_4180 NC_010172.1 4650283 4651779 R PFAM: protein of unknown function UPF0061; KEGG: hne:HNE_0163 hypothetical protein; hypothetical protein complement(4650283..4651779) Methylobacterium extorquens PA1 5834316 YP_001641621.1 CDS Mext_4181 NC_010172.1 4651917 4652849 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc00642 hypothetical protein; hypothetical protein 4651917..4652849 Methylobacterium extorquens PA1 5835222 YP_001641622.1 CDS Mext_4182 NC_010172.1 4653170 4654186 D PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: bbt:BBta_1806 putative two-component sensor histidine kinase; histidine kinase dimerisation/phosphoacceptor 4653170..4654186 Methylobacterium extorquens PA1 5835223 YP_001641623.1 CDS Mext_4183 NC_010172.1 4654547 4655350 D PFAM: lipolytic protein G-D-S-L family; KEGG: acr:Acry_1996 lipolytic enzyme, G-D-S-L family; GDSL family lipase 4654547..4655350 Methylobacterium extorquens PA1 5835224 YP_001641624.1 CDS Mext_4184 NC_010172.1 4655418 4655810 D KEGG: nwi:Nwi_0742 hypothetical protein; hypothetical protein 4655418..4655810 Methylobacterium extorquens PA1 5835225 YP_001641625.1 CDS Mext_4185 NC_010172.1 4655919 4656737 R KEGG: jan:Jann_1274 beta-lactamase-like; beta-lactamase-like protein complement(4655919..4656737) Methylobacterium extorquens PA1 5835226 YP_001641626.1 CDS Mext_4186 NC_010172.1 4656754 4657551 R TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: mes:Meso_1584 hydrolase, TatD family; TatD family hydrolase complement(4656754..4657551) Methylobacterium extorquens PA1 5835227 YP_001641627.1 CDS Mext_4187 NC_010172.1 4657601 4659169 R TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); KEGG: rpe:RPE_2867 methionyl-tRNA synthetase; methionyl-tRNA synthetase complement(4657601..4659169) Methylobacterium extorquens PA1 5834255 YP_001641628.1 CDS Mext_4188 NC_010172.1 4659396 4659611 R hypothetical protein complement(4659396..4659611) Methylobacterium extorquens PA1 5834256 YP_001641629.1 CDS Mext_4189 NC_010172.1 4659909 4660109 D hypothetical protein 4659909..4660109 Methylobacterium extorquens PA1 5834257 YP_001641630.1 CDS Mext_4190 NC_010172.1 4660157 4661239 R KEGG: xau:Xaut_4326 DNA-directed DNA polymerase; DNA-directed DNA polymerase complement(4660157..4661239) Methylobacterium extorquens PA1 5834258 YP_001641631.1 CDS Mext_4191 NC_010172.1 4661229 4661963 R PFAM: thymidylate kinase; KEGG: mes:Meso_1581 thymidylate kinase; dTMP kinase complement(4661229..4661963) Methylobacterium extorquens PA1 5834259 YP_001641632.1 CDS Mext_4192 NC_010172.1 4662018 4662797 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO3466 putrescine ABC transporter, permease protein; ornithine carbamoyltransferase complement(4662018..4662797) Methylobacterium extorquens PA1 5834260 YP_001641633.1 CDS Mext_4193 NC_010172.1 4662794 4663789 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_0165 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(4662794..4663789) Methylobacterium extorquens PA1 5833527 YP_001641634.1 CDS Mext_4194 NC_010172.1 4663786 4664871 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rpb:RPB_1454 spermidine/putrescine ABC transporter ATP-binding subunit; ABC transporter-like protein complement(4663786..4664871) Methylobacterium extorquens PA1 5833528 YP_001641635.1 CDS Mext_4195 NC_010172.1 4664960 4665664 R PFAM: cyclic nucleotide-binding; KEGG: neu:NE1296 cyclic nucleotide-binding domain:cAMP-dependent protein kinase; cyclic nucleotide-binding protein complement(4664960..4665664) Methylobacterium extorquens PA1 5833529 YP_001641636.1 CDS Mext_4196 NC_010172.1 4666041 4666292 D hypothetical protein 4666041..4666292 Methylobacterium extorquens PA1 5833530 YP_001641637.1 CDS Mext_4197 NC_010172.1 4666463 4669165 D KEGG: xau:Xaut_1379 hypothetical protein; hypothetical protein 4666463..4669165 Methylobacterium extorquens PA1 5833531 YP_001641638.1 CDS Mext_4198 NC_010172.1 4669568 4669957 D hypothetical protein 4669568..4669957 Methylobacterium extorquens PA1 5831979 YP_001641639.1 CDS Mext_4199 NC_010172.1 4669995 4671296 R PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll6038 hypothetical transport protein; major facilitator transporter complement(4669995..4671296) Methylobacterium extorquens PA1 5831980 YP_001641640.1 CDS Mext_4200 NC_010172.1 4671387 4672562 R PFAM: aminotransferase class V; KEGG: bja:bll6039 probable SgaA serine-glyoxylate aminotransferase; class V aminotransferase complement(4671387..4672562) Methylobacterium extorquens PA1 5831981 YP_001641641.1 CDS Mext_4201 NC_010172.1 4672714 4673505 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bja:blr6040 transcriptional regulatory protein; regulatory protein GntR 4672714..4673505 Methylobacterium extorquens PA1 5831982 YP_001641642.1 CDS Mext_4202 NC_010172.1 4673531 4674337 D KEGG: azo:azo1163 putative hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel; hydroxypyruvate isomerase 4673531..4674337 Methylobacterium extorquens PA1 5831983 YP_001641643.1 CDS Mext_4203 NC_010172.1 4674453 4675325 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B1317 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(4674453..4675325) Methylobacterium extorquens PA1 5831984 YP_001641644.1 CDS Mext_4204 NC_010172.1 4675402 4678374 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: bja:blr6041 putative glycolate oxidase; D-lactate dehydrogenase complement(4675402..4678374) Methylobacterium extorquens PA1 5833240 YP_001641645.1 CDS Mext_4205 NC_010172.1 4678557 4679921 R TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mlo:mll4552 intracellular PHB depolymerase; polyhydroxyalkanoate depolymerase complement(4678557..4679921) Methylobacterium extorquens PA1 5833241 YP_001641646.1 CDS Mext_4206 NC_010172.1 4680222 4681655 R PFAM: Aldehyde Dehydrogenase_; KEGG: xau:Xaut_2714 aldehyde dehydrogenase; aldehyde dehydrogenase complement(4680222..4681655) Methylobacterium extorquens PA1 5833242 YP_001641647.1 CDS Mext_4207 NC_010172.1 4681821 4682861 R KEGG: acr:Acry_1166 collagen triple helix repeat; triple helix repeat-containing collagen complement(4681821..4682861) Methylobacterium extorquens PA1 5833243 YP_001641648.1 CDS Mext_4208 NC_010172.1 4683740 4684009 R KEGG: hne:HNE_3446 ISHne3, transposase; ISHne3, transposase complement(4683740..4684009) Methylobacterium extorquens PA1 5833244 YP_001641649.1 CDS Mext_4209 NC_010172.1 4684045 4684977 R PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: ret:RHE_CH00241 putative recombinase protein, phage integrase family; integrase domain-containing protein complement(4684045..4684977) Methylobacterium extorquens PA1 5833245 YP_001641650.1 CDS Mext_4210 NC_010172.1 4685665 4685970 R PFAM: surface presentation of antigens (SPOA) protein; KEGG: nwi:Nwi_1730 flagellar motor switch protein; surface presentation of antigens (SPOA) protein complement(4685665..4685970) Methylobacterium extorquens PA1 5831923 YP_001641651.1 CDS Mext_4211 NC_010172.1 4686029 4686763 D TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: rpe:RPE_3436 lipoate-protein ligase B; lipoate-protein ligase B 4686029..4686763 Methylobacterium extorquens PA1 5831924 YP_001641652.1 CDS Mext_4212 NC_010172.1 4686889 4688049 R PFAM: glycosyl transferase family 2; KEGG: rpd:RPD_0578 glycosyl transferase, family 2; glycosyl transferase family protein complement(4686889..4688049) Methylobacterium extorquens PA1 5831925 YP_001641653.1 CDS Mext_4213 NC_010172.1 4688295 4688741 D PFAM: protein of unknown function DUF606; KEGG: reu:Reut_A0176 protein of unknown function DUF606; hypothetical protein 4688295..4688741 Methylobacterium extorquens PA1 5833281 YP_001641654.1 CDS Mext_4214 NC_010172.1 4688763 4690721 R PFAM: protein of unknown function UPF0118; KEGG: rpc:RPC_1866 protein of unknown function UPF0118; hypothetical protein complement(4688763..4690721) Methylobacterium extorquens PA1 5833282 YP_001641655.1 CDS Mext_4215 NC_010172.1 4690950 4691324 R PFAM: response regulator receiver; KEGG: syf:Synpcc7942_1817 response regulator receiver domain protein (CheY-like); response regulator receiver complement(4690950..4691324) Methylobacterium extorquens PA1 5833283 YP_001641656.1 CDS Mext_4216 NC_010172.1 4691401 4692858 D PFAM: pentapeptide repeat protein; KEGG: gvi:gll2892 hypothetical protein; pentapeptide repeat-containing protein 4691401..4692858 Methylobacterium extorquens PA1 5833284 YP_001641657.1 CDS Mext_4217 NC_010172.1 4692975 4695353 D KEGG: mag:amb1112 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein 4692975..4695353 Methylobacterium extorquens PA1 5833285 YP_001641658.1 CDS Mext_4218 NC_010172.1 4695469 4696884 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bja:blr0404 transcriptional regulatory protein; class I and II aminotransferase complement(4695469..4696884) Methylobacterium extorquens PA1 5833286 YP_001641659.1 CDS Mext_4219 NC_010172.1 4697006 4697893 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:bll0403 hypothetical protein; hypothetical protein 4697006..4697893 Methylobacterium extorquens PA1 5831321 YP_001641660.1 CDS Mext_4220 NC_010172.1 4697906 4698640 R PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mlo:mll1133 probable two-component response regulator; response regulator receiver complement(4697906..4698640) Methylobacterium extorquens PA1 5831322 YP_001641661.1 CDS Mext_4221 NC_010172.1 4698766 4699296 R PFAM: GCN5-related N-acetyltransferase; KEGG: acr:Acry_2841 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(4698766..4699296) Methylobacterium extorquens PA1 5831323 YP_001641662.1 CDS Mext_4222 NC_010172.1 4699421 4699927 D PFAM: protein of unknown function DUF983; KEGG: xau:Xaut_0415 protein of unknown function DUF983; hypothetical protein 4699421..4699927 Methylobacterium extorquens PA1 5831324 YP_001641663.1 CDS Mext_4223 NC_010172.1 4700000 4701739 R TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: rpd:RPD_4131 L-lactate transport; L-lactate transport complement(4700000..4701739) Methylobacterium extorquens PA1 5831325 YP_001641664.1 CDS Mext_4224 NC_010172.1 4702112 4703035 D PFAM: manganese containing catalase; KEGG: gka:GK3036 manganese catalase; manganese containing catalase 4702112..4703035 Methylobacterium extorquens PA1 5831326 YP_001641665.1 CDS Mext_4225 NC_010172.1 4703100 4703996 R PFAM: Squalene/phytoene synthase; KEGG: bov:BOV_0889 hypothetical protein; squalene/phytoene synthase complement(4703100..4703996) Methylobacterium extorquens PA1 5834805 YP_001641666.1 CDS Mext_4226 NC_010172.1 4704130 4704525 R PFAM: protein of unknown function DUF498; KEGG: bov:BOV_0888 hypothetical protein; hypothetical protein complement(4704130..4704525) Methylobacterium extorquens PA1 5834806 YP_001641667.1 CDS Mext_4227 NC_010172.1 4704650 4705594 R TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: nha:Nham_1800 SecF protein; protein-export membrane protein SecF complement(4704650..4705594) Methylobacterium extorquens PA1 5834807 YP_001641668.1 CDS Mext_4228 NC_010172.1 4705694 4707292 R TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: rpc:RPC_2776 protein-export membrane protein SecD; protein-export membrane protein SecD complement(4705694..4707292) Methylobacterium extorquens PA1 5834808 YP_001641669.1 CDS Mext_4229 NC_010172.1 4707360 4707692 R TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: xau:Xaut_4308 preprotein translocase, YajC subunit; preprotein translocase subunit YajC complement(4707360..4707692) Methylobacterium extorquens PA1 5834809 YP_001641670.1 CDS Mext_4230 NC_010172.1 4708164 4709054 D PFAM: protein of unknown function DUF815; KEGG: xau:Xaut_4247 protein of unknown function DUF815; hypothetical protein 4708164..4709054 Methylobacterium extorquens PA1 5834810 YP_001641671.1 CDS Mext_4231 NC_010172.1 4709178 4710533 R PFAM: peptidase M23B; KEGG: rpe:RPE_2706 peptidase M23B; peptidase M23B complement(4709178..4710533) Methylobacterium extorquens PA1 5834907 YP_001641672.1 CDS Mext_4232 NC_010172.1 4710737 4711435 R PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; KEGG: xau:Xaut_4414 protein-L-isoaspartate O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(4710737..4711435) Methylobacterium extorquens PA1 5834908 YP_001641673.1 CDS surE NC_010172.1 4711460 4712224 R catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE complement(4711460..4712224) Methylobacterium extorquens PA1 5834909 YP_001641674.1 CDS Mext_4234 NC_010172.1 4712224 4713510 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(4712224..4713510) Methylobacterium extorquens PA1 5834910 YP_001641675.1 CDS Mext_4235 NC_010172.1 4714388 4714906 R PFAM: regulatory protein MarR; KEGG: bbt:BBta_4653 putative transcriptional regulatory protein, MarR family; regulatory protein MarR complement(4714388..4714906) Methylobacterium extorquens PA1 5834911 YP_001641676.1 CDS Mext_4236 NC_010172.1 4715068 4715535 R KEGG: rpc:RPC_2652 hypothetical protein; hypothetical protein complement(4715068..4715535) Methylobacterium extorquens PA1 5835087 YP_001641677.1 CDS Mext_4237 NC_010172.1 4715532 4716692 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pla:Plav_2899 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(4715532..4716692) Methylobacterium extorquens PA1 5835088 YP_001641678.1 CDS Mext_4238 NC_010172.1 4717352 4718407 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 4717352..4718407 Methylobacterium extorquens PA1 5835089 YP_001641679.1 CDS Mext_4239 NC_010172.1 4718448 4718849 D hypothetical protein 4718448..4718849 Methylobacterium extorquens PA1 5835090 YP_001641680.1 CDS Mext_4240 NC_010172.1 4718963 4719457 D PFAM: RDD domain containing protein; KEGG: atc:AGR_C_2148 hypothetical protein; RDD domain-containing protein 4718963..4719457 Methylobacterium extorquens PA1 5835091 YP_001641681.1 CDS Mext_4241 NC_010172.1 4719596 4720342 D Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 4719596..4720342 Methylobacterium extorquens PA1 5835092 YP_001641682.1 CDS Mext_4242 NC_010172.1 4720429 4720755 D TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: rpa:RPA3826 hypothetical protein; addiction module killer protein 4720429..4720755 Methylobacterium extorquens PA1 5834348 YP_001641683.1 CDS Mext_4243 NC_010172.1 4720755 4721072 D KEGG: noc:Noc_0674 hypothetical protein; hypothetical protein 4720755..4721072 Methylobacterium extorquens PA1 5834349 YP_001641684.1 CDS Mext_4244 NC_010172.1 4721107 4721670 R PFAM: transferase hexapeptide repeat containing protein; KEGG: rpa:RPA4378 maltose O-acetyltransferase; hexapaptide repeat-containing transferase complement(4721107..4721670) Methylobacterium extorquens PA1 5834350 YP_001641685.1 CDS Mext_4245 NC_010172.1 4721697 4722602 R PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: xau:Xaut_1265 protein of unknown function zinc metallopeptidase putative; hypothetical protein complement(4721697..4722602) Methylobacterium extorquens PA1 5834351 YP_001641686.1 CDS Mext_4246 NC_010172.1 4722708 4723679 R TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: xau:Xaut_2373 phage SPO1 DNA polymerase-related protein; phage SPO1 DNA polymerase-like protein complement(4722708..4723679) Methylobacterium extorquens PA1 5834352 YP_001641687.1 CDS Mext_4247 NC_010172.1 4723891 4725564 D PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: xau:Xaut_2374 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 4723891..4725564 Methylobacterium extorquens PA1 5834353 YP_001641688.1 CDS Mext_4248 NC_010172.1 4725657 4726646 R PFAM: peptidase S58 DmpA; KEGG: nha:Nham_2617 peptidase S58, DmpA; peptidase S58 DmpA complement(4725657..4726646) Methylobacterium extorquens PA1 5834826 YP_001641689.1 CDS Mext_4249 NC_010172.1 4726643 4727527 R TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE0201 hypothetical protein; transporter DMT superfamily protein complement(4726643..4727527) Methylobacterium extorquens PA1 5834827 YP_001641690.1 CDS Mext_4250 NC_010172.1 4727585 4727872 R hypothetical protein complement(4727585..4727872) Methylobacterium extorquens PA1 5834828 YP_001641691.1 CDS Mext_4251 NC_010172.1 4728015 4728179 D hypothetical protein 4728015..4728179 Methylobacterium extorquens PA1 5834829 YP_001641692.1 CDS Mext_4252 NC_010172.1 4728276 4729463 D TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rpe:RPE_2728 cystathionine beta-lyase; cystathionine beta-lyase 4728276..4729463 Methylobacterium extorquens PA1 5834830 YP_001641693.1 CDS Mext_4253 NC_010172.1 4729702 4730790 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rha:RHA1_ro03787 probable transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 4729702..4730790 Methylobacterium extorquens PA1 5834831 YP_001641694.1 CDS Mext_4254 NC_010172.1 4731457 4731714 D KEGG: rpd:RPD_2220 hypothetical protein; hypothetical protein 4731457..4731714 Methylobacterium extorquens PA1 5834359 YP_001641695.1 CDS Mext_4255 NC_010172.1 4732856 4733209 R KEGG: tcr:511285.120 ATP-dependent RNA helicase Pfam: DEAD Helicase_C GRP PROSITE: DEAD_ATP_HELICASE GLY_RICH; hypothetical protein complement(4732856..4733209) Methylobacterium extorquens PA1 5834360 YP_001641696.1 CDS Mext_4256 NC_010172.1 4733939 4734460 R PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_0861 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(4733939..4734460) Methylobacterium extorquens PA1 5834361 YP_001641697.1 CDS Mext_4257 NC_010172.1 4734604 4735212 R KEGG: xau:Xaut_3746 hypothetical protein; hypothetical protein complement(4734604..4735212) Methylobacterium extorquens PA1 5834362 YP_001641698.1 CDS Mext_4258 NC_010172.1 4735820 4736416 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bvi:Bcep1808_4018 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(4735820..4736416) Methylobacterium extorquens PA1 5834363 YP_001641699.1 CDS Mext_4259 NC_010172.1 4736842 4740102 D KEGG: psb:Psyr_1778 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein 4736842..4740102 Methylobacterium extorquens PA1 5833933 YP_001641700.1 CDS Mext_4260 NC_010172.1 4740364 4742592 R PFAM: glycosyl transferase family 2; KEGG: ace:Acel_0725 glycosyl transferase, family 2; glycosyl transferase family protein complement(4740364..4742592) Methylobacterium extorquens PA1 5833934 YP_001641701.1 CDS Mext_4261 NC_010172.1 4742708 4743094 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: reu:Reut_A1446 hypothetical protein; cupin complement(4742708..4743094) Methylobacterium extorquens PA1 5833935 YP_001641702.1 CDS Mext_4262 NC_010172.1 4743296 4743982 D KEGG: sme:SMb20088 hypothetical fusion protein; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; protein-L-isoaspartate O-methyltransferase 4743296..4743982 Methylobacterium extorquens PA1 5833936 YP_001641703.1 CDS Mext_4263 NC_010172.1 4744174 4744677 D PFAM: heat shock protein Hsp20; KEGG: mlo:mll9627 small heat shock protein; heat shock protein Hsp20 4744174..4744677 Methylobacterium extorquens PA1 5833937 YP_001641704.1 CDS Mext_4264 NC_010172.1 4744791 4745279 D KEGG: bja:bll5218 hypothetical protein; hypothetical protein 4744791..4745279 Methylobacterium extorquens PA1 5833938 YP_001641705.1 CDS Mext_4265 NC_010172.1 4745342 4747405 R TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: rsq:Rsph17025_2933 DNA mismatch repair protein MutL; DNA mismatch repair protein MutL complement(4745342..4747405) Methylobacterium extorquens PA1 5834546 YP_001641706.1 CDS Mext_4266 NC_010172.1 4747547 4748773 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: reu:Reut_B3825 butyryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(4747547..4748773) Methylobacterium extorquens PA1 5834547 YP_001641707.1 CDS Mext_4267 NC_010172.1 4748913 4750778 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_2091 ABC transporter related; ABC transporter-like protein 4748913..4750778 Methylobacterium extorquens PA1 5834548 YP_001641708.1 CDS Mext_4268 NC_010172.1 4751169 4752197 D KEGG: bra:BRADO1608 putative alpha/beta hydrolase fold; putative alpha/beta hydrolase fold 4751169..4752197 Methylobacterium extorquens PA1 5834549 YP_001641709.1 CDS Mext_4269 NC_010172.1 4752283 4752999 R PFAM: bifunctional deaminase-reductase domain protein; KEGG: mxa:MXAN_4511 RibD domain protein; deaminase-reductase domain-containing protein complement(4752283..4752999) Methylobacterium extorquens PA1 5834550 YP_001641710.1 CDS Mext_4270 NC_010172.1 4753148 4753600 D PFAM: OsmC family protein; KEGG: ajs:Ajs_2509 OsmC family protein; OsmC family protein 4753148..4753600 Methylobacterium extorquens PA1 5834551 YP_001641711.1 CDS Mext_4271 NC_010172.1 4753634 4754107 D PFAM: protein of unknown function DUF336; KEGG: xau:Xaut_0298 protein of unknown function DUF336; hypothetical protein 4753634..4754107 Methylobacterium extorquens PA1 5834327 YP_001641712.1 CDS Mext_4272 NC_010172.1 4754476 4756074 D PFAM: extracellular solute-binding protein family 5; KEGG: mes:Meso_0038 extracellular solute-binding protein, family 5; extracellular solute-binding protein 4754476..4756074 Methylobacterium extorquens PA1 5834328 YP_001641713.1 CDS Mext_4273 NC_010172.1 4756071 4756994 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsh:Rsph17029_0131 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4756071..4756994 Methylobacterium extorquens PA1 5834329 YP_001641714.1 CDS Mext_4274 NC_010172.1 4756991 4758082 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7599 ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 4756991..4758082 Methylobacterium extorquens PA1 5834330 YP_001641715.1 CDS Mext_4275 NC_010172.1 4758090 4758380 R hypothetical protein complement(4758090..4758380) Methylobacterium extorquens PA1 5834331 YP_001641716.1 CDS Mext_4276 NC_010172.1 4758512 4759990 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rpd:RPD_1026 major facilitator superfamily MFS_1; major facilitator transporter 4758512..4759990 Methylobacterium extorquens PA1 5834332 YP_001641717.1 CDS Mext_4277 NC_010172.1 4760256 4760846 R hypothetical protein complement(4760256..4760846) Methylobacterium extorquens PA1 5834703 YP_001641718.1 CDS Mext_4278 NC_010172.1 4760986 4761684 R PFAM: protein of unknown function DUF1013; KEGG: xau:Xaut_2354 protein of unknown function DUF1013; hypothetical protein complement(4760986..4761684) Methylobacterium extorquens PA1 5834704 YP_001641719.1 CDS Mext_4279 NC_010172.1 4761916 4762920 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rsh:Rsph17029_3779 transcriptional regulator, LysR family; LysR substrate-binding protein complement(4761916..4762920) Methylobacterium extorquens PA1 5834705 YP_001641720.1 CDS Mext_4280 NC_010172.1 4763055 4763654 D stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 4763055..4763654 Methylobacterium extorquens PA1 5834706 YP_001641721.1 CDS Mext_4281 NC_010172.1 4763717 4765795 R KEGG: pna:Pnap_0565 thiol:disulfide interchange protein, putative; thiol:disulfide interchange protein complement(4763717..4765795) Methylobacterium extorquens PA1 5834707 YP_001641722.1 CDS Mext_4282 NC_010172.1 4766069 4768819 R TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: rpd:RPD_0321 DNA mismatch repair protein MutS; DNA mismatch repair protein MutS complement(4766069..4768819) Methylobacterium extorquens PA1 5834708 YP_001641723.1 CDS Mext_4283 NC_010172.1 4769007 4769324 R hypothetical protein complement(4769007..4769324) Methylobacterium extorquens PA1 5834045 YP_001641724.1 CDS Mext_4284 NC_010172.1 4769444 4772008 D KEGG: nha:Nham_0455 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases; ATP-dependent helicase HrpB 4769444..4772008 Methylobacterium extorquens PA1 5834046 YP_001641725.1 CDS Mext_4285 NC_010172.1 4771965 4772741 R KEGG: bbt:BBta_4432 putative membrane protein of unknown function; hypothetical protein complement(4771965..4772741) Methylobacterium extorquens PA1 5834047 YP_001641726.1 CDS Mext_4286 NC_010172.1 4772892 4773263 D hypothetical protein 4772892..4773263 Methylobacterium extorquens PA1 5834048 YP_001641727.1 CDS Mext_4287 NC_010172.1 4773276 4773671 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr7489 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase complement(4773276..4773671) Methylobacterium extorquens PA1 5834049 YP_001641728.1 CDS Mext_4288 NC_010172.1 4773794 4774891 D TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: rpb:RPB_0271 phage integrase; tyrosine recombinase XerC 4773794..4774891 Methylobacterium extorquens PA1 5834924 YP_001641729.1 CDS Mext_4289 NC_010172.1 4775207 4775830 R PFAM: Phosphoglycerate mutase; KEGG: xau:Xaut_4141 phosphoglycerate mutase; phosphoglycerate mutase complement(4775207..4775830) Methylobacterium extorquens PA1 5834925 YP_001641730.1 CDS Mext_4290 NC_010172.1 4775937 4776983 D PFAM: protein of unknown function DUF344; KEGG: rrs:RoseRS_1635 protein of unknown function DUF344; hypothetical protein 4775937..4776983 Methylobacterium extorquens PA1 5834926 YP_001641731.1 CDS Mext_4291 NC_010172.1 4777124 4777831 D PFAM: MOSC domain containing protein; KEGG: xau:Xaut_5027 MOSC domain containing protein; MOSC domain-containing protein 4777124..4777831 Methylobacterium extorquens PA1 5834927 YP_001641732.1 CDS Mext_4292 NC_010172.1 4777835 4778662 R KEGG: xau:Xaut_4143 enoyl-acyl carrier protein reductase; enoyl-acyl carrier protein reductase complement(4777835..4778662) Methylobacterium extorquens PA1 5834928 YP_001641733.1 CDS Mext_4293 NC_010172.1 4778910 4779860 R PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: bra:BRADO2148 putative heat shock protein DnaJ; heat shock protein DnaJ domain-containing protein complement(4778910..4779860) Methylobacterium extorquens PA1 5834929 YP_001641734.1 CDS Mext_4294 NC_010172.1 4780006 4780596 R KEGG: bja:blr2625 hypothetical protein; hypothetical protein complement(4780006..4780596) Methylobacterium extorquens PA1 5835165 YP_001641735.1 CDS Mext_4295 NC_010172.1 4780635 4781279 D KEGG: gox:GOX1988 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase 4780635..4781279 Methylobacterium extorquens PA1 5835166 YP_001641736.1 CDS Mext_4296 NC_010172.1 4781314 4781661 R PFAM: response regulator receiver; KEGG: rpa:RPA4010 response regulator receiver (CheY-like protein); response regulator receiver complement(4781314..4781661) Methylobacterium extorquens PA1 5835167 YP_001641737.1 CDS Mext_4297 NC_010172.1 4781981 4782733 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_1135 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4781981..4782733 Methylobacterium extorquens PA1 5835168 YP_001641738.1 CDS Mext_4298 NC_010172.1 4782726 4783877 D KEGG: rci:RRC34 hypothetical protein; hypothetical protein 4782726..4783877 Methylobacterium extorquens PA1 5835169 YP_001641739.1 CDS Mext_4299 NC_010172.1 4783874 4784371 D PFAM: NUDIX hydrolase; KEGG: xau:Xaut_1476 NUDIX hydrolase; NUDIX hydrolase 4783874..4784371 Methylobacterium extorquens PA1 5835170 YP_001641740.1 CDS Mext_4300 NC_010172.1 4784368 4784823 D PFAM: conserved hypothetical protein; KEGG: rpa:RPA1072 hypothetical protein; hypothetical protein 4784368..4784823 Methylobacterium extorquens PA1 5831649 YP_001641741.1 CDS Mext_4301 NC_010172.1 4785117 4785416 D KEGG: rpd:RPD_1241 hypothetical protein; hypothetical protein 4785117..4785416 Methylobacterium extorquens PA1 5831650 YP_001641742.1 CDS Mext_4302 NC_010172.1 4785615 4787246 R KEGG: smd:Smed_1375 hypothetical protein; hypothetical protein complement(4785615..4787246) Methylobacterium extorquens PA1 5831651 YP_001641743.1 CDS Mext_4303 NC_010172.1 4787481 4788818 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(4787481..4788818) Methylobacterium extorquens PA1 5831652 YP_001641744.1 CDS Mext_4304 NC_010172.1 4788920 4789774 D TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: xau:Xaut_1416 glycine cleavage T protein (aminomethyl transferase); folate-binding protein YgfZ 4788920..4789774 Methylobacterium extorquens PA1 5831653 YP_001641745.1 CDS Mext_4305 NC_010172.1 4789771 4790400 D PFAM: methyladenine glycosylase; KEGG: bbt:BBta_2374 3-methyl-adenine DNA glycosylase I, constitutive; DNA-3-methyladenine glycosylase I 4789771..4790400 Methylobacterium extorquens PA1 5831654 YP_001641746.1 CDS Mext_4306 NC_010172.1 4790397 4791023 D PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: rpb:RPB_1114 metal dependent phosphohydrolase; metal-dependent phosphohydrolase 4790397..4791023 Methylobacterium extorquens PA1 5831107 YP_001641747.1 CDS Mext_4307 NC_010172.1 4791038 4791550 D KEGG: mlo:mll1302 hypothetical protein; hypothetical protein 4791038..4791550 Methylobacterium extorquens PA1 5831108 YP_001641748.1 CDS Mext_4308 NC_010172.1 4791650 4791916 D TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: bra:BRADO2164 exodeoxyribonuclease small subunit; exodeoxyribonuclease VII small subunit 4791650..4791916 Methylobacterium extorquens PA1 5831109 YP_001641749.1 CDS Mext_4309 NC_010172.1 4792006 4793982 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 4792006..4793982 Methylobacterium extorquens PA1 5831110 YP_001641750.1 CDS Mext_4310 NC_010172.1 4794028 4794633 R PFAM: superoxide dismutase copper/zinc binding; KEGG: xau:Xaut_2922 superoxide dismutase copper/zinc binding; copper/zinc binding superoxide dismutase complement(4794028..4794633) Methylobacterium extorquens PA1 5831111 YP_001641751.1 CDS Mext_4311 NC_010172.1 4794993 4795745 D TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: xau:Xaut_4163 hemolysin A; hemolysin A 4794993..4795745 Methylobacterium extorquens PA1 5831112 YP_001641752.1 CDS Mext_4312 NC_010172.1 4795745 4797040 D PFAM: (Uracil-5)-methyltransferase; KEGG: rpa:RPA0948 possible hypothetical RNA methyltransferase; (uracil-5)-methyltransferase 4795745..4797040 Methylobacterium extorquens PA1 5832830 YP_001641753.1 CDS Mext_4313 NC_010172.1 4797115 4798359 R KEGG: cyb:CYB_0430 tetratricopeptide repeat protein; capsular polysaccharide biosynthesis protein-like protein complement(4797115..4798359) Methylobacterium extorquens PA1 5832831 YP_001641754.1 CDS Mext_4314 NC_010172.1 4798675 4799676 D KEGG: pat:Patl_3215 hypothetical protein; hypothetical protein 4798675..4799676 Methylobacterium extorquens PA1 5832832 YP_001641755.1 CDS Mext_4315 NC_010172.1 4799689 4800456 R PFAM: protein of unknown function DUF159; KEGG: pla:Plav_0767 protein of unknown function DUF159; hypothetical protein complement(4799689..4800456) Methylobacterium extorquens PA1 5832833 YP_001641756.1 CDS Mext_4316 NC_010172.1 4800589 4801809 D PFAM: protein of unknown function DUF482; KEGG: mlo:mlr0661 hypothetical protein; hypothetical protein 4800589..4801809 Methylobacterium extorquens PA1 5832834 YP_001641757.1 CDS Mext_4317 NC_010172.1 4801806 4802963 D KEGG: rpa:RPA3439 putative hydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 4801806..4802963 Methylobacterium extorquens PA1 5832835 YP_001641758.1 CDS Mext_4318 NC_010172.1 4803157 4804299 D TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: azo:azo2292 methylated-DNA--[protein]-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase 4803157..4804299 Methylobacterium extorquens PA1 5833381 YP_001641759.1 CDS Mext_4319 NC_010172.1 4804304 4805326 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mlo:mll4860 hypothetical protein; cation diffusion facilitator family transporter complement(4804304..4805326) Methylobacterium extorquens PA1 5833382 YP_001641760.1 CDS Mext_4320 NC_010172.1 4805448 4805876 D PFAM: histidine triad (HIT) protein; KEGG: mlo:mlr0662 probable Hit-like protein involved in cell-cycle regulation; histidine triad (HIT) protein 4805448..4805876 Methylobacterium extorquens PA1 5833383 YP_001641761.1 CDS Mext_4321 NC_010172.1 4805932 4806378 R PFAM: type IV pilus assembly PilZ; KEGG: bbt:BBta_7466 hypothetical protein; type IV pilus assembly PilZ complement(4805932..4806378) Methylobacterium extorquens PA1 5833384 YP_001641762.1 CDS Mext_4322 NC_010172.1 4806460 4806708 R hypothetical protein complement(4806460..4806708) Methylobacterium extorquens PA1 5833385 YP_001641763.1 CDS Mext_4323 NC_010172.1 4806994 4808877 R PFAM: glycoside hydrolase 15-related; KEGG: sru:SRU_0387 glycosyl hydrolase, family 15; glycoside hydrolase 15-related complement(4806994..4808877) Methylobacterium extorquens PA1 5833386 YP_001641764.1 CDS Mext_4324 NC_010172.1 4808969 4809247 R hypothetical protein complement(4808969..4809247) Methylobacterium extorquens PA1 5833487 YP_001641765.1 CDS Mext_4325 NC_010172.1 4809310 4810476 R KEGG: hch:HCH_06986 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase complement(4809310..4810476) Methylobacterium extorquens PA1 5833488 YP_001641766.1 CDS Mext_4326 NC_010172.1 4810574 4811584 R PFAM: sugar isomerase (SIS); KEGG: xcv:XCV0770 glucosamine-6-phosphate deaminase; glutamine--fructose-6-phosphate transaminase complement(4810574..4811584) Methylobacterium extorquens PA1 5833489 YP_001641767.1 CDS murQ NC_010172.1 4811581 4812468 R catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase complement(4811581..4812468) Methylobacterium extorquens PA1 5833490 YP_001641768.1 CDS Mext_4328 NC_010172.1 4812563 4813549 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sme:SMb20092 hypothetical protein; endonuclease/exonuclease/phosphatase 4812563..4813549 Methylobacterium extorquens PA1 5833491 YP_001641769.1 CDS Mext_4329 NC_010172.1 4813628 4814695 D PFAM: Asparaginase/glutaminase; KEGG: har:HEAR1103 putative L-asparaginase; putative signal peptide protein; asparaginase 4813628..4814695 Methylobacterium extorquens PA1 5832082 YP_001641770.1 CDS Mext_4330 NC_010172.1 4814812 4816359 R PFAM: phospholipase D/Transphosphatidylase; KEGG: ccr:CC_0522 phospholipase D family protein; phospholipase D/transphosphatidylase complement(4814812..4816359) Methylobacterium extorquens PA1 5832083 YP_001641771.1 CDS Mext_4331 NC_010172.1 4816418 4817116 R PFAM: SNARE associated Golgi protein; KEGG: rba:RB11207 hypothetical protein; hypothetical protein complement(4816418..4817116) Methylobacterium extorquens PA1 5832084 YP_001641772.1 CDS Mext_4332 NC_010172.1 4817264 4817674 R hypothetical protein complement(4817264..4817674) Methylobacterium extorquens PA1 5832085 YP_001641773.1 CDS Mext_4333 NC_010172.1 4817856 4818590 R PFAM: Surfeit locus 1 family protein; KEGG: bbt:BBta_2034 putative SURF1 family protein; surfeit locus 1 family protein complement(4817856..4818590) Methylobacterium extorquens PA1 5832086 YP_001641774.1 CDS Mext_4334 NC_010172.1 4818676 4819056 R TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: smd:Smed_4369 cytochrome o ubiquinol oxidase subunit IV; cytochrome o ubiquinol oxidase subunit IV complement(4818676..4819056) Methylobacterium extorquens PA1 5832087 YP_001641775.1 CDS Mext_4335 NC_010172.1 4819053 4819700 R TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: rle:pRL110040 putative cytochrome o ubiquinol oxidase subunit III; cytochrome o ubiquinol oxidase subunit III complement(4819053..4819700) Methylobacterium extorquens PA1 5831144 YP_001641776.1 CDS Mext_4336 NC_010172.1 4819709 4821712 R KEGG: smd:Smed_4371 cytochrome o ubiquinol oxidase subunit I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome o ubiquinol oxidase subunit I complement(4819709..4821712) Methylobacterium extorquens PA1 5831145 YP_001641777.1 CDS Mext_4337 NC_010172.1 4821752 4822915 R TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: sme:SMb21487 putative cytochrome o ubiquinol oxidase chain II protein; ubiquinol oxidase subunit II complement(4821752..4822915) Methylobacterium extorquens PA1 5831146 YP_001641778.1 CDS Mext_4338 NC_010172.1 4823110 4824528 R KEGG: rle:pRL110043 putative transmembrane transporter protein; putative transmembrane transporter protein complement(4823110..4824528) Methylobacterium extorquens PA1 5831147 YP_001641779.1 CDS Mext_4339 NC_010172.1 4824738 4827800 R PFAM: acriflavin resistance protein; KEGG: mlo:mll5518 RND efflux transporter; acriflavin resistance protein complement(4824738..4827800) Methylobacterium extorquens PA1 5831148 YP_001641780.1 CDS Mext_4340 NC_010172.1 4827857 4829020 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rle:pRL120697 putative HlyD family secretion protein; RND family efflux transporter MFP subunit complement(4827857..4829020) Methylobacterium extorquens PA1 5831149 YP_001641781.1 CDS Mext_4341 NC_010172.1 4829017 4830201 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpa:RPA1959 putative RND efflux membrane protein; RND family efflux transporter MFP subunit complement(4829017..4830201) Methylobacterium extorquens PA1 5832757 YP_001641782.1 CDS Mext_4342 NC_010172.1 4830381 4830941 D PFAM: regulatory protein TetR; KEGG: mmr:Mmar10_2114 transcriptional regulator, TetR family; regulatory protein TetR 4830381..4830941 Methylobacterium extorquens PA1 5832758 YP_001641783.1 CDS Mext_4343 NC_010172.1 4831261 4831971 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rpd:RPD_3789 response regulator receiver; response regulator receiver complement(4831261..4831971) Methylobacterium extorquens PA1 5832759 YP_001641784.1 CDS Mext_4344 NC_010172.1 4831973 4833187 R PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rpd:RPD_3788 phytochrome; ATPase domain-containing protein complement(4831973..4833187) Methylobacterium extorquens PA1 5832760 YP_001641785.1 CDS Mext_4345 NC_010172.1 4833881 4834531 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mlo:mll6762 two component system response regulator; regulatory protein LuxR 4833881..4834531 Methylobacterium extorquens PA1 5832761 YP_001641786.1 CDS Mext_4346 NC_010172.1 4834725 4835486 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: nha:Nham_3000 two component transcriptional regulator, LuxR family; regulatory protein LuxR 4834725..4835486 Methylobacterium extorquens PA1 5832762 YP_001641787.1 CDS Mext_4347 NC_010172.1 4835581 4836399 D PFAM: glycosyl transferase family 2; KEGG: rpe:RPE_3510 glycosyl transferase, family 2; glycosyl transferase family protein 4835581..4836399 Methylobacterium extorquens PA1 5833003 YP_001641788.1 CDS Mext_4348 NC_010172.1 4836569 4837753 D KEGG: rpa:RPA0172 hypothetical protein; hypothetical protein 4836569..4837753 Methylobacterium extorquens PA1 5833004 YP_001641789.1 CDS Mext_4349 NC_010172.1 4838371 4839381 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rpc:RPC_4634 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 4838371..4839381 Methylobacterium extorquens PA1 5833006 YP_001641790.1 CDS Mext_4350 NC_010172.1 4839410 4840363 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS05312 probable transcription regulator protein; LysR substrate-binding protein complement(4839410..4840363) Methylobacterium extorquens PA1 5833007 YP_001641791.1 CDS Mext_4351 NC_010172.1 4840537 4840785 D hypothetical protein 4840537..4840785 Methylobacterium extorquens PA1 5831570 YP_001641792.1 CDS Mext_4352 NC_010172.1 4840819 4841571 D PFAM: protein of unknown function DUF81; KEGG: rme:Rmet_3822 protein of unknown function DUF81; hypothetical protein 4840819..4841571 Methylobacterium extorquens PA1 5831571 YP_001641793.1 CDS Mext_4353 NC_010172.1 4841641 4842552 R KEGG: ade:Adeh_4032 general secretory system II, protein E-like; hypothetical protein complement(4841641..4842552) Methylobacterium extorquens PA1 5831572 YP_001641794.1 CDS Mext_4354 NC_010172.1 4842549 4843523 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: xau:Xaut_0504 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase complement(4842549..4843523) Methylobacterium extorquens PA1 5831573 YP_001641795.1 CDS Mext_4355 NC_010172.1 4843765 4845207 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 4843765..4845207 Methylobacterium extorquens PA1 5831574 YP_001641796.1 CDS Mext_4356 NC_010172.1 4845956 4846234 D hypothetical protein 4845956..4846234 Methylobacterium extorquens PA1 5833445 YP_001641797.1 CDS Mext_4357 NC_010172.1 4846301 4846906 R PFAM: regulatory protein TetR; KEGG: rpc:RPC_1901 transcriptional regulator, TetR family; regulatory protein TetR complement(4846301..4846906) Methylobacterium extorquens PA1 5833446 YP_001641798.1 CDS Mext_4358 NC_010172.1 4846995 4848260 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:bll3872 HlyD family secretion protein; RND family efflux transporter MFP subunit 4846995..4848260 Methylobacterium extorquens PA1 5833447 YP_001641799.1 CDS Mext_4359 NC_010172.1 4848358 4851552 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bja:bll3871 AcrB/AcrD/AcrF family protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 4848358..4851552 Methylobacterium extorquens PA1 5833448 YP_001641800.1 CDS Mext_4360 NC_010172.1 4852011 4852613 D PFAM: regulatory protein TetR; KEGG: sgl:SG0229 putative transcriptional regulator; regulatory protein TetR 4852011..4852613 Methylobacterium extorquens PA1 5831122 YP_001641801.1 CDS Mext_4361 NC_010172.1 4852787 4853473 D PFAM: ThiJ/PfpI domain protein; KEGG: aav:Aave_0745 transcriptional regulator, fis family; ThiJ/PfpI domain-containing protein 4852787..4853473 Methylobacterium extorquens PA1 5831123 YP_001641802.1 CDS Mext_4362 NC_010172.1 4853713 4853889 D KEGG: msm:MSMEG_3970 glutamyl-tRNA(Gln) amidotransferase subunit A; glutamyl-tRNA(Gln) amidotransferase subunit A 4853713..4853889 Methylobacterium extorquens PA1 5831124 YP_001641803.1 CDS Mext_4363 NC_010172.1 4854134 4854820 R PFAM: peptidase membrane zinc metallopeptidase putative; KEGG: aeh:Mlg_1818 peptidase, membrane zinc metallopeptidase, putative; peptidase membrane zinc metallopeptidase putative complement(4854134..4854820) Methylobacterium extorquens PA1 5831125 YP_001641804.1 CDS Mext_4364 NC_010172.1 4855041 4856657 R PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: jan:Jann_2058 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin-disulfide reductase complement(4855041..4856657) Methylobacterium extorquens PA1 5831126 YP_001641805.1 CDS Mext_4365 NC_010172.1 4856954 4857859 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rle:RL2334 putative AraC family transcriptional regulator; helix-turn-helix domain-containing protein complement(4856954..4857859) Methylobacterium extorquens PA1 5831127 YP_001641806.1 CDS Mext_4366 NC_010172.1 4858014 4858592 D KEGG: mlo:mlr4665 hypothetical protein; hypothetical protein 4858014..4858592 Methylobacterium extorquens PA1 5833108 YP_001641807.1 CDS Mext_4367 NC_010172.1 4858998 4860389 R PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rle:pRL120187 putative amine oxidase family protein; amine oxidase complement(4858998..4860389) Methylobacterium extorquens PA1 5833109 YP_001641808.1 CDS Mext_4368 NC_010172.1 4860464 4861294 D PFAM: ThiJ/PfpI domain protein; KEGG: rpb:RPB_2555 twin-arginine translocation pathway signal; ThiJ/PfpI domain-containing protein 4860464..4861294 Methylobacterium extorquens PA1 5833110 YP_001641809.1 CDS Mext_4369 NC_010172.1 4861740 4862168 R KEGG: mms:mma_2325 hypothetical protein; hypothetical protein complement(4861740..4862168) Methylobacterium extorquens PA1 5833111 YP_001641810.1 CDS Mext_4370 NC_010172.1 4862380 4863405 D KEGG: csa:Csal_0183 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic components-like protein 4862380..4863405 Methylobacterium extorquens PA1 5833112 YP_001641811.1 CDS Mext_4371 NC_010172.1 4863425 4864177 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_0182 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4863425..4864177 Methylobacterium extorquens PA1 5833113 YP_001641812.1 CDS Mext_4372 NC_010172.1 4864174 4864935 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb1865 ABC-type nitrate/sulfonate/bicarbonate transport system; ABC transporter-like protein 4864174..4864935 Methylobacterium extorquens PA1 5835026 YP_001641813.1 CDS Mext_4373 NC_010172.1 4865049 4865483 D KEGG: atc:AGR_C_779 hypothetical protein; hypothetical protein 4865049..4865483 Methylobacterium extorquens PA1 5835027 YP_001641814.1 CDS Mext_4374 NC_010172.1 4865623 4865814 D hypothetical protein 4865623..4865814 Methylobacterium extorquens PA1 5835028 YP_001641815.1 CDS Mext_4375 NC_010172.1 4866116 4867735 R TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: bms:BRA1063 peptide chain release factor 3; peptide chain release factor 3 complement(4866116..4867735) Methylobacterium extorquens PA1 5835029 YP_001641816.1 CDS Mext_4376 NC_010172.1 4867842 4868591 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_3017 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4867842..4868591) Methylobacterium extorquens PA1 5835030 YP_001641817.1 CDS Mext_4377 NC_010172.1 4869012 4869278 D hypothetical protein 4869012..4869278 Methylobacterium extorquens PA1 5833156 YP_001641818.1 CDS Mext_4378 NC_010172.1 4869402 4869608 D hypothetical protein 4869402..4869608 Methylobacterium extorquens PA1 5833157 YP_001641819.1 CDS Mext_4379 NC_010172.1 4870743 4871213 R KEGG: bra:BRADO3295 hypothetical protein; putative signal sequence; hypothetical protein complement(4870743..4871213) Methylobacterium extorquens PA1 5833158 YP_001641820.1 CDS Mext_4380 NC_010172.1 4872688 4874034 R PFAM: Hemolysin-type calcium-binding region; KEGG: ana:alr7304 similar to hlyA; hemolysin-type calcium-binding protein complement(4872688..4874034) Methylobacterium extorquens PA1 5833159 YP_001641821.1 CDS Mext_4381 NC_010172.1 4874236 4874985 R hypothetical protein complement(4874236..4874985) Methylobacterium extorquens PA1 5833160 YP_001641822.1 CDS Mext_4382 NC_010172.1 4875118 4875861 R hypothetical protein complement(4875118..4875861) Methylobacterium extorquens PA1 5834953 YP_001641823.1 CDS Mext_4383 NC_010172.1 4876058 4876759 R PFAM: Peptidoglycan-binding domain 1 protein; KEGG: ecw:EcE24377A_2232 conserved hypothetical protein TIGR02594; peptidoglycan binding domain-containing protein complement(4876058..4876759) Methylobacterium extorquens PA1 5834954 YP_001641824.1 CDS Mext_4384 NC_010172.1 4877247 4878827 R hypothetical protein complement(4877247..4878827) Methylobacterium extorquens PA1 5834955 YP_001641825.1 CDS Mext_4385 NC_010172.1 4878871 4879575 D hypothetical protein 4878871..4879575 Methylobacterium extorquens PA1 5834956 YP_001641826.1 CDS Mext_4386 NC_010172.1 4879577 4880014 D hypothetical protein 4879577..4880014 Methylobacterium extorquens PA1 5834957 YP_001641827.1 CDS Mext_4387 NC_010172.1 4880014 4881309 D hypothetical protein 4880014..4881309 Methylobacterium extorquens PA1 5835098 YP_001641828.1 CDS Mext_4388 NC_010172.1 4881719 4882918 D PFAM: integrase family protein; KEGG: sat:SYN_00695 phage integrase family protein; integrase family protein 4881719..4882918 Methylobacterium extorquens PA1 5835099 YP_001641829.1 CDS Mext_4390 NC_010172.1 4883326 4883814 R KEGG: ava:Ava_3457 hypothetical protein; hypothetical protein complement(4883326..4883814) Methylobacterium extorquens PA1 5835101 YP_001641830.1 CDS Mext_4391 NC_010172.1 4884164 4884538 D KEGG: bov:BOV_1943 hypothetical protein; hypothetical protein 4884164..4884538 Methylobacterium extorquens PA1 5835102 YP_001641831.1 CDS Mext_4392 NC_010172.1 4885227 4886417 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(4885227..4886417) Methylobacterium extorquens PA1 5835103 YP_001641832.1 CDS Mext_4393 NC_010172.1 4886540 4886815 R PFAM: RNA-binding S4 domain protein; KEGG: acr:Acry_3089 RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein complement(4886540..4886815) Methylobacterium extorquens PA1 5835071 YP_001641833.1 CDS Mext_4394 NC_010172.1 4886892 4890314 R PFAM: helicase domain protein; KEGG: xau:Xaut_2639 helicase domain protein; helicase domain-containing protein complement(4886892..4890314) Methylobacterium extorquens PA1 5835072 YP_001641834.1 CDS Mext_4395 NC_010172.1 4890504 4890848 R hypothetical protein complement(4890504..4890848) Methylobacterium extorquens PA1 5835073 YP_001641835.1 CDS Mext_4396 NC_010172.1 4891065 4891985 R KEGG: xau:Xaut_1938 hypothetical protein; hypothetical protein complement(4891065..4891985) Methylobacterium extorquens PA1 5835074 YP_001641836.1 CDS Mext_4397 NC_010172.1 4892225 4892770 D PFAM: Heme NO binding domain protein; KEGG: hch:HCH_03700 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; heme NO binding domain-containing protein 4892225..4892770 Methylobacterium extorquens PA1 5835075 YP_001641837.1 CDS Mext_4398 NC_010172.1 4892778 4894322 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: dar:Daro_1579 PAS:GGDEF; diguanylate cyclase 4892778..4894322 Methylobacterium extorquens PA1 5835076 YP_001641838.1 CDS Mext_4399 NC_010172.1 4894337 4895338 R PFAM: Glucokinase; KEGG: oan:Oant_1332 glucokinase; glucokinase complement(4894337..4895338) Methylobacterium extorquens PA1 5830933 YP_001641839.1 CDS Mext_4400 NC_010172.1 4895429 4896184 R KEGG: bvi:Bcep1808_1075 HAD-superfamily hydrolase, subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; HAD family hydrolase complement(4895429..4896184) Methylobacterium extorquens PA1 5830934 YP_001641840.1 CDS Mext_4401 NC_010172.1 4896271 4896765 D PFAM: protein of unknown function DUF427; KEGG: mjl:Mjls_3005 protein of unknown function DUF427; hypothetical protein 4896271..4896765 Methylobacterium extorquens PA1 5830935 YP_001641841.1 CDS Mext_4402 NC_010172.1 4897025 4898242 D PFAM: beta-lactamase; KEGG: sil:SPO1641 beta-lactamase; beta-lactamase 4897025..4898242 Methylobacterium extorquens PA1 5830936 YP_001641842.1 CDS Mext_4403 NC_010172.1 4898413 4900392 D TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: pap:PSPA7_6064 probable choline transporter; choline/carnitine/betaine transporter 4898413..4900392 Methylobacterium extorquens PA1 5830937 YP_001641843.1 CDS Mext_4404 NC_010172.1 4900884 4901357 D PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: rpd:RPD_0625 NADH dehydrogenase (ubiquinone), 24 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit 4900884..4901357 Methylobacterium extorquens PA1 5830938 YP_001641844.1 CDS Mext_4405 NC_010172.1 4901354 4902913 D PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: gbe:GbCGDNIH1_1933 NAD-dependent formate dehydrogenase beta subunit (FdsB); NADH dehydrogenase (quinone) 4901354..4902913 Methylobacterium extorquens PA1 5834742 YP_001641845.1 CDS Mext_4406 NC_010172.1 4902926 4905778 D TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: bbt:BBta_3089 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha 4902926..4905778 Methylobacterium extorquens PA1 5834743 YP_001641846.1 CDS Mext_4407 NC_010172.1 4905835 4906275 D KEGG: gbe:GbCGDNIH1_1936 NAD-dependent formate dehydrogenase delta subunit (FdsD); hypothetical protein 4905835..4906275 Methylobacterium extorquens PA1 5834744 YP_001641847.1 CDS Mext_4408 NC_010172.1 4906367 4907302 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_3482 transcriptional regulator, LysR family; LysR substrate-binding protein 4906367..4907302 Methylobacterium extorquens PA1 5834745 YP_001641848.1 CDS Mext_4409 NC_010172.1 4907375 4907839 R hypothetical protein complement(4907375..4907839) Methylobacterium extorquens PA1 5834746 YP_001641849.1 CDS Mext_4410 NC_010172.1 4907889 4908923 R TIGRFAM: small GTP-binding protein; GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: xau:Xaut_2055 GTP-binding protein Obg/CgtA; GTP-binding protein Obg/CgtA complement(4907889..4908923) Methylobacterium extorquens PA1 5834747 YP_001641850.1 CDS Mext_4411 NC_010172.1 4908960 4909439 R hypothetical protein complement(4908960..4909439) Methylobacterium extorquens PA1 5834486 YP_001641851.1 CDS Mext_4412 NC_010172.1 4909436 4910035 R PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_2144 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(4909436..4910035) Methylobacterium extorquens PA1 5834487 YP_001641852.1 CDS rpmA NC_010172.1 4910224 4910490 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(4910224..4910490) Methylobacterium extorquens PA1 5834488 YP_001641853.1 CDS rplU NC_010172.1 4910539 4910931 R PFAM: ribosomal protein L21; KEGG: smd:Smed_3005 ribosomal protein L21; 50S ribosomal protein L21 complement(4910539..4910931) Methylobacterium extorquens PA1 5834489 YP_001641854.1 CDS Mext_4415 NC_010172.1 4911127 4912692 R PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: nha:Nham_2631 protein of unknown function DUF853, NPT hydrolase putative; hypothetical protein complement(4911127..4912692) Methylobacterium extorquens PA1 5834490 YP_001641855.1 CDS Mext_4416 NC_010172.1 4912847 4913233 D KEGG: oan:Oant_2694 hypothetical protein; hypothetical protein 4912847..4913233 Methylobacterium extorquens PA1 5834491 YP_001641856.1 CDS Mext_4417 NC_010172.1 4913446 4914444 D KEGG: rpa:RPA0316 hypothetical protein; hypothetical protein 4913446..4914444 Methylobacterium extorquens PA1 5835154 YP_001641857.1 CDS Mext_4418 NC_010172.1 4914467 4915690 D PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_3861 major facilitator superfamily MFS_1; major facilitator transporter 4914467..4915690 Methylobacterium extorquens PA1 5835155 YP_001641858.1 CDS Mext_4419 NC_010172.1 4916171 4916419 D hypothetical protein 4916171..4916419 Methylobacterium extorquens PA1 5835156 YP_001641859.1 CDS Mext_4420 NC_010172.1 4916439 4917632 R PFAM: Patatin; KEGG: rpd:RPD_2041 patatin; patatin complement(4916439..4917632) Methylobacterium extorquens PA1 5835157 YP_001641860.1 CDS Mext_4421 NC_010172.1 4918090 4918638 D KEGG: rsp:RSP_6158 light-harvesting complex alpha subunit; hypothetical protein 4918090..4918638 Methylobacterium extorquens PA1 5835158 YP_001641861.1 CDS Mext_4422 NC_010172.1 4918852 4919067 D hypothetical protein 4918852..4919067 Methylobacterium extorquens PA1 5835159 YP_001641862.1 CDS Mext_4423 NC_010172.1 4919064 4919582 D KEGG: nwi:Nwi_2052 hypothetical protein; hypothetical protein 4919064..4919582 Methylobacterium extorquens PA1 5833457 YP_001641863.1 CDS Mext_4424 NC_010172.1 4919659 4920558 D PFAM: diacylglycerol kinase catalytic region; KEGG: rru:Rru_A3289 diacylglycerol kinase, catalytic region; diacylglycerol kinase catalytic subunit 4919659..4920558 Methylobacterium extorquens PA1 5833458 YP_001641864.1 CDS Mext_4425 NC_010172.1 4920555 4921433 D PFAM: metallophosphoesterase; KEGG: mlo:mll9676 3',5'-cyclic-nucleotide phosphodiesterase CpdA homolog; metallophosphoesterase 4920555..4921433 Methylobacterium extorquens PA1 5833459 YP_001641865.1 CDS Mext_4426 NC_010172.1 4921461 4922921 R PFAM: Na+/solute symporter; KEGG: gtn:GTNG_3183 sodium/proline symporter; Na+/solute symporter complement(4921461..4922921) Methylobacterium extorquens PA1 5833460 YP_001641866.1 CDS Mext_4427 NC_010172.1 4922918 4923121 R KEGG: gtn:GTNG_3184 hypothetical protein; hypothetical protein complement(4922918..4923121) Methylobacterium extorquens PA1 5833461 YP_001641867.1 CDS Mext_4428 NC_010172.1 4923301 4925382 R KEGG: rpe:RPE_0362 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS sensor protein complement(4923301..4925382) Methylobacterium extorquens PA1 5833462 YP_001641868.1 CDS Mext_4429 NC_010172.1 4925607 4926056 R KEGG: atc:AGR_C_779 hypothetical protein; hypothetical protein complement(4925607..4926056) Methylobacterium extorquens PA1 5833463 YP_001641869.1 CDS Mext_4430 NC_010172.1 4926118 4926864 R PFAM: Nucleotidyl transferase; KEGG: xau:Xaut_3298 nucleotidyl transferase; nucleotidyl transferase complement(4926118..4926864) Methylobacterium extorquens PA1 5833464 YP_001641870.1 CDS Mext_4431 NC_010172.1 4926898 4928547 R PFAM: aminoglycoside phosphotransferase; protein of unknown function UPF0079; KEGG: xau:Xaut_3297 protein of unknown function UPF0079; hypothetical protein complement(4926898..4928547) Methylobacterium extorquens PA1 5833465 YP_001641871.1 CDS Mext_4432 NC_010172.1 4928784 4931324 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: nha:Nham_0053 PAS/PAC sensor signal transduction histidine kinase; ATPase domain-containing protein complement(4928784..4931324) Methylobacterium extorquens PA1 5833466 YP_001641872.1 CDS Mext_4433 NC_010172.1 4931814 4933220 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(4931814..4933220) Methylobacterium extorquens PA1 5833467 YP_001641873.1 CDS Mext_4434 NC_010172.1 4933390 4935078 R PFAM: AMP-dependent synthetase and ligase; KEGG: rle:RL4301 putative acetyl-coenzyme A synthetase; AMP-dependent synthetase and ligase complement(4933390..4935078) Methylobacterium extorquens PA1 5833468 YP_001641874.1 CDS Mext_4435 NC_010172.1 4935156 4935767 R PFAM: nitroreductase; KEGG: xau:Xaut_2772 nitroreductase; nitroreductase complement(4935156..4935767) Methylobacterium extorquens PA1 5834227 YP_001641875.1 CDS Mext_4436 NC_010172.1 4936012 4936824 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpe:RPE_2855 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 4936012..4936824 Methylobacterium extorquens PA1 5834228 YP_001641876.1 CDS Mext_4437 NC_010172.1 4936931 4937710 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: gox:GOX0070 hypothetical membrane-spanning protein; endonuclease/exonuclease/phosphatase 4936931..4937710 Methylobacterium extorquens PA1 5834229 YP_001641877.1 CDS Mext_4438 NC_010172.1 4937601 4939037 R PFAM: phospholipase D/Transphosphatidylase; KEGG: gox:GOX0071 cardiolipin synthetase; phospholipase D/transphosphatidylase complement(4937601..4939037) Methylobacterium extorquens PA1 5834230 YP_001641878.1 CDS Mext_4439 NC_010172.1 4939263 4942406 D TIGRFAM: double-strand break repair protein AddB; KEGG: xau:Xaut_3299 double-strand break repair protein AddB; double-strand break repair protein AddB 4939263..4942406 Methylobacterium extorquens PA1 5834231 YP_001641879.1 CDS Mext_4440 NC_010172.1 4942403 4945846 D TIGRFAM: double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; KEGG: bbt:BBta_0090 putative helicase-exonuclease type V protein family, AddA subunit; double-strand break repair helicase AddA 4942403..4945846 Methylobacterium extorquens PA1 5834232 YP_001641880.1 CDS Mext_4441 NC_010172.1 4945940 4947226 R PFAM: glucose sorbosone dehydrogenase; KEGG: atc:AGR_L_1629 hypothetical protein; glucose sorbosone dehydrogenase complement(4945940..4947226) Methylobacterium extorquens PA1 5834104 YP_001641881.1 CDS Mext_4442 NC_010172.1 4947561 4947920 D TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bov:BOV_2021 thioredoxin; thioredoxin 4947561..4947920 Methylobacterium extorquens PA1 5834105 YP_001641882.1 CDS Mext_4443 NC_010172.1 4948078 4948968 R KEGG: xau:Xaut_2469 porin; porin complement(4948078..4948968) Methylobacterium extorquens PA1 5834106 YP_001641883.1 CDS Mext_4444 NC_010172.1 4949357 4950682 R TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; KEGG: rpd:RPD_0200 FolC bifunctional protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(4949357..4950682) Methylobacterium extorquens PA1 5834107 YP_001641884.1 CDS Mext_4445 NC_010172.1 4950715 4951638 R TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: rpe:RPE_0456 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta complement(4950715..4951638) Methylobacterium extorquens PA1 5834108 YP_001641885.1 CDS trpA NC_010172.1 4951749 4952591 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(4951749..4952591) Methylobacterium extorquens PA1 5834109 YP_001641886.1 CDS Mext_4447 NC_010172.1 4952763 4953722 R PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; KEGG: oan:Oant_0019 NADH pyrophosphatase-like protein; NUDIX hydrolase complement(4952763..4953722) Methylobacterium extorquens PA1 5834110 YP_001641887.1 CDS Mext_4448 NC_010172.1 4953733 4954149 R PFAM: histidine triad (HIT) protein; KEGG: pla:Plav_2685 histidine triad (HIT) protein; histidine triad (HIT) protein complement(4953733..4954149) Methylobacterium extorquens PA1 5834111 YP_001641888.1 CDS Mext_4449 NC_010172.1 4954314 4955390 D PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rpa:RPA0145 metal dependent phosphohydrolase with a response regulator receiver domain; metal-dependent phosphohydrolase 4954314..4955390 Methylobacterium extorquens PA1 5834112 YP_001641889.1 CDS Mext_4450 NC_010172.1 4955728 4957434 D PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: xau:Xaut_1589 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 4955728..4957434 Methylobacterium extorquens PA1 5834113 YP_001641890.1 CDS Mext_4451 NC_010172.1 4957531 4958373 R KEGG: rsq:Rsph17025_0561 hypothetical protein; hypothetical protein complement(4957531..4958373) Methylobacterium extorquens PA1 5834114 YP_001641891.1 CDS Mext_4452 NC_010172.1 4958834 4960363 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rpe:RPE_3141 putative signal transduction histidine kinase; ATPase domain-containing protein 4958834..4960363 Methylobacterium extorquens PA1 5834115 YP_001641892.1 CDS Mext_4453 NC_010172.1 4960374 4961063 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bra:BRADO1924 putative two-component response regulator, lux-R family; response regulator receiver 4960374..4961063 Methylobacterium extorquens PA1 5833683 YP_001641893.1 CDS Mext_4454 NC_010172.1 4961091 4961774 D PFAM: TENA/THI-4 domain protein; KEGG: har:HEAR0909 putative transcriptional activator (TenA family); TENA/THI-4 domain-containing protein 4961091..4961774 Methylobacterium extorquens PA1 5833684 YP_001641894.1 CDS Mext_4455 NC_010172.1 4961939 4963429 D PFAM: amino acid permease-associated region; KEGG: sus:Acid_4944 amino acid permease-associated region; amino acid permease-associated protein 4961939..4963429 Methylobacterium extorquens PA1 5833685 YP_001641895.1 CDS Mext_4456 NC_010172.1 4963564 4964613 R PFAM: beta-lactamase domain protein; KEGG: ret:RHE_PE00054 hypothetical protein; beta-lactamase domain-containing protein complement(4963564..4964613) Methylobacterium extorquens PA1 5833686 YP_001641896.1 CDS Mext_4457 NC_010172.1 4964661 4965851 R PFAM: protein of unknown function DUF949; KEGG: bra:BRADO0605 conserved hypothetical protein; putative exported protein; putative transcriptiona regulatory protein at C-terminal; hypothetical protein complement(4964661..4965851) Methylobacterium extorquens PA1 5833687 YP_001641897.1 CDS Mext_4458 NC_010172.1 4965977 4968586 R KEGG: smd:Smed_4600 ABC transporter related; multidrug ABC transporter ATPase and permease components-like protein complement(4965977..4968586) Methylobacterium extorquens PA1 5833688 YP_001641898.1 CDS Mext_4459 NC_010172.1 4969017 4970945 D KEGG: reu:Reut_B4429 polysulphide reductase, NrfD; hypothetical protein 4969017..4970945 Methylobacterium extorquens PA1 5833356 YP_001641899.1 CDS Mext_4460 NC_010172.1 4970942 4972171 D KEGG: sus:Acid_0494 hypothetical protein; hypothetical protein 4970942..4972171 Methylobacterium extorquens PA1 5833357 YP_001641900.1 CDS Mext_4461 NC_010172.1 4972146 4973051 D PFAM: glutamine amidotransferase class-II; KEGG: stm:STM0311 putative glutamine amidotransferase; glutamine amidotransferase 4972146..4973051 Methylobacterium extorquens PA1 5833358 YP_001641901.1 CDS Mext_4462 NC_010172.1 4973218 4974033 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mes:Meso_3107 RNA polymerase, sigma-24 subunit, ECF subfamily; sigma-70 family RNA polymerase sigma factor 4973218..4974033 Methylobacterium extorquens PA1 5833359 YP_001641902.1 CDS Mext_4463 NC_010172.1 4974762 4975295 R PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator; ROSMUCR transcriptional regulator complement(4974762..4975295) Methylobacterium extorquens PA1 5833360 YP_001641903.1 CDS Mext_4464 NC_010172.1 4975667 4976065 R hypothetical protein complement(4975667..4976065) Methylobacterium extorquens PA1 5833361 YP_001641904.1 CDS Mext_4465 NC_010172.1 4976301 4977476 D KEGG: bra:BRADO5746 hypothetical protein; hypothetical protein 4976301..4977476 Methylobacterium extorquens PA1 5833817 YP_001641905.1 CDS Mext_4466 NC_010172.1 4977696 4978016 R PFAM: ferredoxin; KEGG: bra:BRADO5081 2Fe-2S ferredoxin (FdII); ferredoxin complement(4977696..4978016) Methylobacterium extorquens PA1 5833818 YP_001641906.1 CDS Mext_4467 NC_010172.1 4978232 4978603 R PFAM: Hpt domain protein; KEGG: bja:bll5886 two-component hybrid sensor and regulator; Hpt domain-containing protein complement(4978232..4978603) Methylobacterium extorquens PA1 5833819 YP_001641907.1 CDS Mext_4468 NC_010172.1 4978937 4987330 D KEGG: rle:RL2654 putative transmembrane protein; hypothetical protein 4978937..4987330 Methylobacterium extorquens PA1 5833820 YP_001641908.1 CDS Mext_4469 NC_010172.1 4987486 4988115 R PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: xau:Xaut_4454 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein complement(4987486..4988115) Methylobacterium extorquens PA1 5833821 YP_001641909.1 CDS Mext_4470 NC_010172.1 4988292 4989098 R KEGG: bja:bll5905 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase complement(4988292..4989098) Methylobacterium extorquens PA1 5833822 YP_001641910.1 CDS Mext_4471 NC_010172.1 4989145 4989870 R PFAM: thiamine monophosphate synthase; KEGG: atc:AGR_L_3059 thiamine-phosphate pyrophosphorylase; thiamine-phosphate diphosphorylase complement(4989145..4989870) Methylobacterium extorquens PA1 5833636 YP_001641911.1 CDS Mext_4472 NC_010172.1 4990002 4991102 D KEGG: bbr:BB4287 hypothetical protein; hypothetical protein 4990002..4991102 Methylobacterium extorquens PA1 5833637 YP_001641912.1 CDS Mext_4473 NC_010172.1 4991167 4991442 R hypothetical protein complement(4991167..4991442) Methylobacterium extorquens PA1 5833638 YP_001641913.1 CDS Mext_4474 NC_010172.1 4991763 4992293 R PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator; ROSMUCR transcriptional regulator complement(4991763..4992293) Methylobacterium extorquens PA1 5833639 YP_001641914.1 CDS Mext_4475 NC_010172.1 4993229 4994173 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase complement(4993229..4994173) Methylobacterium extorquens PA1 5833640 YP_001641915.1 CDS Mext_4476 NC_010172.1 4994428 4994967 D KEGG: uma:UM00593.1 hypothetical protein; hypothetical protein 4994428..4994967 Methylobacterium extorquens PA1 5833641 YP_001641916.1 CDS Mext_4477 NC_010172.1 4995021 4995830 R TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc03196 putative molybdate-binding periplasmic ABC transporter protein; molybdenum ABC transporter periplasmic molybdate-binding protein complement(4995021..4995830) Methylobacterium extorquens PA1 5832743 YP_001641917.1 CDS Mext_4478 NC_010172.1 4996001 4996171 R hypothetical protein complement(4996001..4996171) Methylobacterium extorquens PA1 5832744 YP_001641918.1 CDS Mext_4479 NC_010172.1 4996789 4997706 D PFAM: ribosomal L11 methyltransferase; KEGG: rpc:RPC_3290 ribosomal L11 methyltransferase; ribosomal L11 methyltransferase 4996789..4997706 Methylobacterium extorquens PA1 5832745 YP_001641919.1 CDS Mext_4480 NC_010172.1 4997878 4999716 D PFAM: creatinase; peptidase M24; KEGG: rpd:RPD_3379 peptidase M24; peptidase M24 4997878..4999716 Methylobacterium extorquens PA1 5832746 YP_001641920.1 CDS Mext_4481 NC_010172.1 4999713 5000192 D PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rsq:Rsph17025_3233 hypothetical protein; low molecular weight phosphotyrosine protein phosphatase 4999713..5000192 Methylobacterium extorquens PA1 5832747 YP_001641921.1 CDS Mext_4482 NC_010172.1 5000189 5000995 D PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: zmo:ZMO0139 fructosamine-3-kinase; aminoglycoside phosphotransferase 5000189..5000995 Methylobacterium extorquens PA1 5832748 YP_001641922.1 CDS Mext_4483 NC_010172.1 5001066 5001416 R hypothetical protein complement(5001066..5001416) Methylobacterium extorquens PA1 5831989 YP_001641923.1 CDS Mext_4484 NC_010172.1 5001413 5001664 R hypothetical protein complement(5001413..5001664) Methylobacterium extorquens PA1 5831990 YP_001641924.1 CDS Mext_4485 NC_010172.1 5001748 5003886 R PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: bbt:BBta_1667 putative ABC transporter (fused ATP-binding and permease components); ABC transporter complement(5001748..5003886) Methylobacterium extorquens PA1 5831991 YP_001641925.1 CDS Mext_4486 NC_010172.1 5004135 5004464 R KEGG: xau:Xaut_2465 hypothetical protein; hypothetical protein complement(5004135..5004464) Methylobacterium extorquens PA1 5831992 YP_001641926.1 CDS Mext_4487 NC_010172.1 5004699 5005412 D hypothetical protein 5004699..5005412 Methylobacterium extorquens PA1 5831993 YP_001641927.1 CDS Mext_4488 NC_010172.1 5005562 5006479 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ret:RHE_CH01279 putative pyridoxine 5'-phosphate oxidase protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(5005562..5006479) Methylobacterium extorquens PA1 5831994 YP_001641928.1 CDS Mext_4489 NC_010172.1 5006476 5007102 R PFAM: Glutathione S-transferase domain; KEGG: rle:RL1425 putative glutathione S-transferase; glutathione S-transferase domain-containing protein complement(5006476..5007102) Methylobacterium extorquens PA1 5833749 YP_001641929.1 CDS Mext_4490 NC_010172.1 5007247 5008152 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: nar:Saro_2765 transcriptional regulator, LysR family; LysR substrate-binding protein 5007247..5008152 Methylobacterium extorquens PA1 5833750 YP_001641930.1 CDS Mext_4491 NC_010172.1 5008183 5009787 R Catalyzes the reduction of sulfite to sulfide, an essential step in the anaerobic sulfate-respiration pathway; sulfite reductase complement(5008183..5009787) Methylobacterium extorquens PA1 5833751 YP_001641931.1 CDS nirA NC_010172.1 5009784 5011589 R ferredoxin-dependent assimilatory nitrite reductase; ferredoxin-nitrite reductase complement(5009784..5011589) Methylobacterium extorquens PA1 5833752 YP_001641932.1 CDS Mext_4493 NC_010172.1 5011586 5012806 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: rpe:RPE_1261 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(5011586..5012806) Methylobacterium extorquens PA1 5833753 YP_001641933.1 CDS Mext_4494 NC_010172.1 5012832 5013626 R KEGG: xau:Xaut_2502 nitrate ABC transporter, ATPase subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; nitrate ABC transporter ATPases C and D complement(5012832..5013626) Methylobacterium extorquens PA1 5833754 YP_001641934.1 CDS Mext_4495 NC_010172.1 5013639 5014496 R TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO2472 nitrate transport permease protein (NrtB); nitrate ABC transporter inner membrane subunit complement(5013639..5014496) Methylobacterium extorquens PA1 5832016 YP_001641935.1 CDS Mext_4496 NC_010172.1 5014496 5015788 R KEGG: rpb:RPB_1760 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal complement(5014496..5015788) Methylobacterium extorquens PA1 5832017 YP_001641936.1 CDS Mext_4497 NC_010172.1 5016120 5017136 R KEGG: xau:Xaut_2505 putative nitrate transport protein; putative nitrate transport protein complement(5016120..5017136) Methylobacterium extorquens PA1 5832018 YP_001641937.1 CDS Mext_4498 NC_010172.1 5017133 5017720 R PFAM: response regulator receiver; ANTAR domain protein; KEGG: mlo:mlr2855 two-component response regulator; ANTAR domain-containing protein complement(5017133..5017720) Methylobacterium extorquens PA1 5832019 YP_001641938.1 CDS Mext_4499 NC_010172.1 5017973 5018593 D KEGG: lma:LmjF35.0290 hypothetical protein, conserved; hypothetical protein 5017973..5018593 Methylobacterium extorquens PA1 5832020 YP_001641939.1 CDS Mext_4500 NC_010172.1 5018815 5020674 D PFAM: glycoside hydrolase 15-related; KEGG: nwi:Nwi_2309 glycoside hydrolase 15-related; glycoside hydrolase 15-related 5018815..5020674 Methylobacterium extorquens PA1 5832021 YP_001641940.1 CDS Mext_4501 NC_010172.1 5020725 5022800 D TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: gbe:GbCGDNIH1_0856 transketolase; transketolase 5020725..5022800 Methylobacterium extorquens PA1 5832226 YP_001641941.1 CDS Mext_4502 NC_010172.1 5023016 5025841 D catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; catalyzes isomerization of glucose 6-phosphate and fructose 6-phosphate; bifunctional transaldolase/phosoglucose isomerase 5023016..5025841 Methylobacterium extorquens PA1 5832227 YP_001641942.1 CDS Mext_4503 NC_010172.1 5026142 5026786 R PFAM: SNARE associated Golgi protein; KEGG: acr:Acry_2490 uncharacterized membrane-associated protein-like protein; hypothetical protein complement(5026142..5026786) Methylobacterium extorquens PA1 5832228 YP_001641943.1 CDS Mext_4504 NC_010172.1 5026883 5027152 R hypothetical protein complement(5026883..5027152) Methylobacterium extorquens PA1 5832229 YP_001641944.1 CDS Mext_4505 NC_010172.1 5027221 5028681 R KEGG: rru:Rru_A1712 chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; PAS sensor protein complement(5027221..5028681) Methylobacterium extorquens PA1 5832230 YP_001641945.1 CDS Mext_4506 NC_010172.1 5029119 5029991 R KEGG: kra:Krad_3429 hypothetical protein; hypothetical protein complement(5029119..5029991) Methylobacterium extorquens PA1 5832231 YP_001641946.1 CDS Mext_4507 NC_010172.1 5030175 5031242 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nwi:Nwi_2310 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(5030175..5031242) Methylobacterium extorquens PA1 5834397 YP_001641947.1 CDS Mext_4508 NC_010172.1 5031376 5034585 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: smd:Smed_2643 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family protein complement(5031376..5034585) Methylobacterium extorquens PA1 5834398 YP_001641948.1 CDS Mext_4509 NC_010172.1 5034748 5035893 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sme:SMc03972 putative multidrug efflux system transmembrane protein; RND family efflux transporter MFP subunit complement(5034748..5035893) Methylobacterium extorquens PA1 5834399 YP_001641949.1 CDS Mext_4510 NC_010172.1 5036013 5036336 R PFAM: Rhodanese domain protein; KEGG: xau:Xaut_2590 rhodanese domain protein; rhodanese domain-containing protein complement(5036013..5036336) Methylobacterium extorquens PA1 5834400 YP_001641950.1 CDS Mext_4511 NC_010172.1 5036385 5037755 R PFAM: glycosyl transferase group 1; KEGG: swi:Swit_4016 glycosyl transferase, group 1; group 1 glycosyl transferase complement(5036385..5037755) Methylobacterium extorquens PA1 5834401 YP_001641951.1 CDS Mext_4512 NC_010172.1 5037820 5038368 R hypothetical protein complement(5037820..5038368) Methylobacterium extorquens PA1 5834402 YP_001641952.1 CDS Mext_4513 NC_010172.1 5038541 5039176 R PFAM: autoinducer synthesis protein; KEGG: nwi:Nwi_0626 autoinducer synthesis protein; autoinducer synthesis protein complement(5038541..5039176) Methylobacterium extorquens PA1 5834443 YP_001641953.1 CDS Mext_4514 NC_010172.1 5039654 5040385 R PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: rpb:RPB_3321 transcriptional regulator, LuxR family; autoinducer-binding domain-containing protein complement(5039654..5040385) Methylobacterium extorquens PA1 5834444 YP_001641954.1 CDS Mext_4515 NC_010172.1 5041832 5042866 D hypothetical protein 5041832..5042866 Methylobacterium extorquens PA1 5834446 YP_001641955.1 CDS Mext_4516 NC_010172.1 5042952 5043785 D TIGRFAM: methyltransferase FkbM family; KEGG: mav:MAV_1133 methyltransferase FkbM; FkbM family methyltransferase 5042952..5043785 Methylobacterium extorquens PA1 5834447 YP_001641956.1 CDS Mext_4517 NC_010172.1 5043877 5045262 R KEGG: gox:GOX0967 hypothetical protein; hypothetical protein complement(5043877..5045262) Methylobacterium extorquens PA1 5834716 YP_001641957.1 CDS Mext_4518 NC_010172.1 5046347 5047306 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gbe:GbCGDNIH1_2337 transcriptional regulators, LysR family; LysR substrate-binding protein complement(5046347..5047306) Methylobacterium extorquens PA1 5834717 YP_001641958.1 CDS Mext_4519 NC_010172.1 5047403 5047654 D hypothetical protein 5047403..5047654 Methylobacterium extorquens PA1 5834718 YP_001641959.1 CDS Mext_4520 NC_010172.1 5047797 5050991 R PFAM: acriflavin resistance protein; KEGG: bra:BRADO6304 putative multidrug efflux transporter, AcrB/AcrD/AcrF family protein; acriflavin resistance protein complement(5047797..5050991) Methylobacterium extorquens PA1 5834719 YP_001641960.1 CDS Mext_4521 NC_010172.1 5050994 5052100 R KEGG: bra:BRADO6305 putative multidrug resistant protein; hypothetical protein complement(5050994..5052100) Methylobacterium extorquens PA1 5834720 YP_001641961.1 CDS Mext_4522 NC_010172.1 5052348 5052761 D KEGG: nar:Saro_0724 glycosyl transferase, family 2; hypothetical protein 5052348..5052761 Methylobacterium extorquens PA1 5834721 YP_001641962.1 CDS Mext_4523 NC_010172.1 5052861 5053382 D hypothetical protein 5052861..5053382 Methylobacterium extorquens PA1 5834736 YP_001641963.1 CDS Mext_4524 NC_010172.1 5053395 5055233 R PFAM: Pyrrolo-quinoline quinone; KEGG: bxe:Bxe_B2415 putative quinoprotein alcohol dehydrogenase; Pyrrolo-quinoline quinone complement(5053395..5055233) Methylobacterium extorquens PA1 5834737 YP_001641964.1 CDS Mext_4525 NC_010172.1 5055424 5055696 D hypothetical protein 5055424..5055696 Methylobacterium extorquens PA1 5834738 YP_001641965.1 CDS Mext_4526 NC_010172.1 5055741 5056886 R PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: rpe:RPE_3014 signal transduction histidine kinase; histidine kinase dimerisation/phosphoacceptor complement(5055741..5056886) Methylobacterium extorquens PA1 5834739 YP_001641966.1 CDS Mext_4527 NC_010172.1 5057187 5057573 R hypothetical protein complement(5057187..5057573) Methylobacterium extorquens PA1 5834740 YP_001641967.1 CDS Mext_4528 NC_010172.1 5057715 5060066 R PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: pfo:Pfl_4169 twin-arginine translocation pathway signal; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase complement(5057715..5060066) Methylobacterium extorquens PA1 5834741 YP_001641968.1 CDS Mext_4529 NC_010172.1 5060063 5060548 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bam:Bamb_1231 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein complement(5060063..5060548) Methylobacterium extorquens PA1 5833892 YP_001641969.1 CDS Mext_4530 NC_010172.1 5060966 5061310 R KEGG: xcv:XCV3887 hypothetical protein; hypothetical protein complement(5060966..5061310) Methylobacterium extorquens PA1 5833893 YP_001641970.1 CDS Mext_4531 NC_010172.1 5061562 5061765 R hypothetical protein complement(5061562..5061765) Methylobacterium extorquens PA1 5833894 YP_001641971.1 CDS Mext_4532 NC_010172.1 5062115 5062360 D hypothetical protein 5062115..5062360 Methylobacterium extorquens PA1 5833895 YP_001641972.1 CDS Mext_4533 NC_010172.1 5062518 5065466 R KEGG: gbe:GbCGDNIH1_1334 phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase complement(5062518..5065466) Methylobacterium extorquens PA1 5833896 YP_001641973.1 CDS Mext_4534 NC_010172.1 5065593 5066159 D hypothetical protein 5065593..5066159 Methylobacterium extorquens PA1 5833897 YP_001641974.1 CDS Mext_4535 NC_010172.1 5066198 5067028 D KEGG: lma:LmjF35.0290 hypothetical protein, conserved; hypothetical protein 5066198..5067028 Methylobacterium extorquens PA1 5831276 YP_001641975.1 CDS Mext_4536 NC_010172.1 5067037 5068710 D PFAM: Saccharopine dehydrogenase; KEGG: ret:RHE_CH01011 hypothetical protein; saccharopine dehydrogenase 5067037..5068710 Methylobacterium extorquens PA1 5831277 YP_001641976.1 CDS Mext_4537 NC_010172.1 5068707 5069147 D PFAM: protein of unknown function DUF985; KEGG: mmr:Mmar10_2382 protein of unknown function DUF985; hypothetical protein 5068707..5069147 Methylobacterium extorquens PA1 5831278 YP_001641977.1 CDS Mext_4538 NC_010172.1 5069282 5070499 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: zmo:ZMO0689 glucose-fructose oxidoreductase chain A; oxidoreductase domain-containing protein 5069282..5070499 Methylobacterium extorquens PA1 5831279 YP_001641978.1 CDS Mext_4539 NC_010172.1 5070597 5071040 D PFAM: protein of unknown function DUF606; KEGG: mul:MUL_3006 hypothetical protein; hypothetical protein 5070597..5071040 Methylobacterium extorquens PA1 5831280 YP_001641979.1 CDS Mext_4540 NC_010172.1 5071373 5072260 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pde:Pden_3396 transcriptional regulator, LysR family; LysR substrate-binding protein 5071373..5072260 Methylobacterium extorquens PA1 5831281 YP_001641980.1 CDS Mext_4541 NC_010172.1 5072266 5073288 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: xau:Xaut_1258 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase complement(5072266..5073288) Methylobacterium extorquens PA1 5832112 YP_001641981.1 CDS Mext_4542 NC_010172.1 5073567 5076857 D KEGG: bbt:BBta_4271 putative histidine kinase with PAS/PAC motif; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS sensor protein 5073567..5076857 Methylobacterium extorquens PA1 5832113 YP_001641982.1 CDS Mext_4543 NC_010172.1 5076925 5077209 R PFAM: SH3 type 3 domain protein; SH3 type 3 domain-containing protein complement(5076925..5077209) Methylobacterium extorquens PA1 5832114 YP_001641983.1 CDS Mext_4544 NC_010172.1 5077221 5077994 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xau:Xaut_1259 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(5077221..5077994) Methylobacterium extorquens PA1 5832115 YP_001641984.1 CDS Mext_4545 NC_010172.1 5077991 5079277 R FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-(acyl carrier protein) synthase II complement(5077991..5079277) Methylobacterium extorquens PA1 5832116 YP_001641985.1 CDS Mext_4546 NC_010172.1 5079507 5080667 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II complement(5079507..5080667) Methylobacterium extorquens PA1 5832117 YP_001641986.1 CDS Mext_4547 NC_010172.1 5080664 5081128 R PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: smd:Smed_1740 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ complement(5080664..5081128) Methylobacterium extorquens PA1 5832798 YP_001641987.1 CDS Mext_4548 NC_010172.1 5081157 5081453 R Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein complement(5081157..5081453) Methylobacterium extorquens PA1 5832799 YP_001641988.1 CDS Mext_4549 NC_010172.1 5081659 5082147 R hypothetical protein complement(5081659..5082147) Methylobacterium extorquens PA1 5832800 YP_001641989.1 CDS Mext_4550 NC_010172.1 5082322 5082621 D KEGG: aha:AHA_0450 GGDEF family protein; diguanylate cyclase 5082322..5082621 Methylobacterium extorquens PA1 5832801 YP_001641990.1 CDS Mext_4551 NC_010172.1 5082698 5083777 D PFAM: protein of unknown function UPF0118; KEGG: gbe:GbCGDNIH1_0407 hypothetical membrane spanning protein; hypothetical protein 5082698..5083777 Methylobacterium extorquens PA1 5832802 YP_001641991.1 CDS Mext_4552 NC_010172.1 5083782 5084651 R KEGG: cvi:CV_1739 hypothetical protein; hypothetical protein complement(5083782..5084651) Methylobacterium extorquens PA1 5832803 YP_001641992.1 CDS Mext_4553 NC_010172.1 5084827 5085315 D hypothetical protein 5084827..5085315 Methylobacterium extorquens PA1 5835228 YP_001641993.1 CDS Mext_4554 NC_010172.1 5085320 5085733 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: rle:RL3719 hypothetical protein; cupin 5085320..5085733 Methylobacterium extorquens PA1 5835229 YP_001641994.1 CDS Mext_4555 NC_010172.1 5085779 5086075 D KEGG: xau:Xaut_2465 hypothetical protein; hypothetical protein 5085779..5086075 Methylobacterium extorquens PA1 5835230 YP_001641995.1 CDS Mext_4556 NC_010172.1 5086150 5086620 R PFAM: heat shock protein Hsp20; KEGG: xau:Xaut_2821 heat shock protein HSP20; heat shock protein Hsp20 complement(5086150..5086620) Methylobacterium extorquens PA1 5835231 YP_001641996.1 CDS Mext_4557 NC_010172.1 5086803 5087795 D PFAM: alpha/beta hydrolase fold; KEGG: rpa:RPA0888 putative lysophospholipase L2; alpha/beta hydrolase fold protein 5086803..5087795 Methylobacterium extorquens PA1 5835232 YP_001641997.1 CDS Mext_4558 NC_010172.1 5088504 5090849 D PFAM: Hemolysin-type calcium-binding region; KEGG: pen:PSEEN0141 surface adhesion protein; hemolysin-type calcium-binding protein 5088504..5090849 Methylobacterium extorquens PA1 5835233 YP_001641998.1 CDS Mext_4559 NC_010172.1 5091012 5091803 R TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: bbt:BBta_1389 putative inositol monophosphatase family protein; histidinol-phosphate phosphatase complement(5091012..5091803) Methylobacterium extorquens PA1 5835571 YP_001641999.1 CDS Mext_4560 NC_010172.1 5091859 5093865 R PFAM: protein of unknown function UPF0118; KEGG: gbe:GbCGDNIH1_2397 hypothetical membrane spanning protein; hypothetical protein complement(5091859..5093865) Methylobacterium extorquens PA1 5835572 YP_001642000.1 CDS Mext_4561 NC_010172.1 5094139 5094921 R PFAM: LamB/YcsF family protein; KEGG: rpe:RPE_3039 LamB/YcsF family protein; LamB/YcsF family protein complement(5094139..5094921) Methylobacterium extorquens PA1 5835573 YP_001642001.1 CDS Mext_4562 NC_010172.1 5094932 5096230 R catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(5094932..5096230) Methylobacterium extorquens PA1 5835574 YP_001642002.1 CDS Mext_4563 NC_010172.1 5096388 5096891 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mxa:MXAN_0453 putative general stress protein 26; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(5096388..5096891) Methylobacterium extorquens PA1 5835575 YP_001642003.1 CDS Mext_4564 NC_010172.1 5097005 5097313 D hypothetical protein 5097005..5097313 Methylobacterium extorquens PA1 5835576 YP_001642004.1 CDS Mext_4565 NC_010172.1 5097405 5098541 D KEGG: atc:AGR_C_1282 MRP protein homolog; MRP protein-like protein 5097405..5098541 Methylobacterium extorquens PA1 5832331 YP_001642005.1 CDS Mext_4566 NC_010172.1 5098580 5099194 D TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: rpe:RPE_3728 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein A 5098580..5099194 Methylobacterium extorquens PA1 5832332 YP_001642006.1 CDS Mext_4567 NC_010172.1 5099519 5102254 D TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: bbt:BBta_4371 DNA gyrase, subunit A, type II topoisomerase; DNA gyrase subunit A 5099519..5102254 Methylobacterium extorquens PA1 5832333 YP_001642007.1 CDS Mext_4568 NC_010172.1 5102476 5103300 D KEGG: xau:Xaut_2469 porin; porin 5102476..5103300 Methylobacterium extorquens PA1 5832334 YP_001642008.1 CDS coaD NC_010172.1 5103443 5103946 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 5103443..5103946 Methylobacterium extorquens PA1 5832335 YP_001642009.1 CDS Mext_4570 NC_010172.1 5103972 5104514 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: oan:Oant_2179 peptidyl-prolyl cis-trans isomerase cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 5103972..5104514 Methylobacterium extorquens PA1 5832336 YP_001642010.1 CDS Mext_4571 NC_010172.1 5104574 5105017 D KEGG: rpa:RPA2603 hypothetical protein; hypothetical protein 5104574..5105017 Methylobacterium extorquens PA1 5830919 YP_001642011.1 CDS Mext_4572 NC_010172.1 5105021 5105482 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: hne:HNE_1405 putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type; cyclophilin type peptidyl-prolyl cis-trans isomerase 5105021..5105482 Methylobacterium extorquens PA1 5830920 YP_001642012.1 CDS Mext_4573 NC_010172.1 5105554 5105958 R PFAM: response regulator receiver; KEGG: rpd:RPD_3796 response regulator receiver; response regulator receiver complement(5105554..5105958) Methylobacterium extorquens PA1 5830921 YP_001642013.1 CDS Mext_4574 NC_010172.1 5106351 5107112 D KEGG: swi:Swit_4947 hypothetical protein; hypothetical protein 5106351..5107112 Methylobacterium extorquens PA1 5830922 YP_001642014.1 CDS Mext_4575 NC_010172.1 5107027 5108529 D KEGG: oan:Oant_3146 hypothetical protein; hypothetical protein 5107027..5108529 Methylobacterium extorquens PA1 5830923 YP_001642015.1 CDS Mext_4576 NC_010172.1 5108606 5111821 D KEGG: nha:Nham_3765 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 5108606..5111821 Methylobacterium extorquens PA1 5830924 YP_001642016.1 CDS Mext_4577 NC_010172.1 5111975 5112187 D KEGG: sme:SMb20474 hypothetical protein; hypothetical protein 5111975..5112187 Methylobacterium extorquens PA1 5835109 YP_001642017.1 CDS Mext_4578 NC_010172.1 5112413 5113438 D PFAM: Patatin; KEGG: bte:BTH_II0018 patatin-like phospholipase; patatin 5112413..5113438 Methylobacterium extorquens PA1 5835110 YP_001642018.1 CDS Mext_4579 NC_010172.1 5113603 5114373 R PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: rpc:RPC_2765 ion transport 2; Ion transport 2 domain-containing protein complement(5113603..5114373) Methylobacterium extorquens PA1 5835111 YP_001642019.1 CDS Mext_4580 NC_010172.1 5114883 5115194 D hypothetical protein 5114883..5115194 Methylobacterium extorquens PA1 5835112 YP_001642020.1 CDS Mext_4581 NC_010172.1 5115258 5116976 D PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: bja:blr2316 probable NADH-ubiquinone oxidoreductase chain F; respiratory-chain NADH dehydrogenase domain-containing protein 5115258..5116976 Methylobacterium extorquens PA1 5835113 YP_001642021.1 CDS Mext_4582 NC_010172.1 5117029 5119998 D TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: bja:blr2317 formate dehydrogenase alpha subunit; formate dehydrogenase subunit alpha 5117029..5119998 Methylobacterium extorquens PA1 5835114 YP_001642022.1 CDS Mext_4583 NC_010172.1 5120271 5121623 R PFAM: polysaccharide biosynthesis protein; KEGG: aba:Acid345_3798 hypothetical protein; polysaccharide biosynthesis protein complement(5120271..5121623) Methylobacterium extorquens PA1 5833954 YP_001642023.1 CDS Mext_4584 NC_010172.1 5121638 5122636 R KEGG: mag:amb0043 hypothetical protein; hypothetical protein complement(5121638..5122636) Methylobacterium extorquens PA1 5833955 YP_001642024.1 CDS Mext_4585 NC_010172.1 5122841 5123671 D PFAM: polysaccharide deacetylase; KEGG: fra:Francci3_1587 polysaccharide deacetylase; polysaccharide deacetylase 5122841..5123671 Methylobacterium extorquens PA1 5833956 YP_001642025.1 CDS Mext_4586 NC_010172.1 5123809 5124939 D PFAM: glycosyl transferase group 1; KEGG: bra:BRADO7053 hypothetical protein, putative glycosyl transferase; group 1 glycosyl transferase 5123809..5124939 Methylobacterium extorquens PA1 5833957 YP_001642026.1 CDS Mext_4587 NC_010172.1 5125345 5125887 D KEGG: dra:DR_2133 hypothetical protein; hypothetical protein 5125345..5125887 Methylobacterium extorquens PA1 5833958 YP_001642027.1 CDS Mext_4588 NC_010172.1 5126000 5128078 R KEGG: afw:Anae109_1237 hypothetical protein; hypothetical protein complement(5126000..5128078) Methylobacterium extorquens PA1 5833959 YP_001642028.1 CDS Mext_4589 NC_010172.1 5128075 5130198 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: mlo:mll2090 hypothetical protein; lipopolysaccharide biosynthesis protein complement(5128075..5130198) Methylobacterium extorquens PA1 5834888 YP_001642029.1 CDS Mext_4590 NC_010172.1 5130377 5131747 R KEGG: ret:RHE_CH01355 exopolysaccharide production protein; hypothetical protein complement(5130377..5131747) Methylobacterium extorquens PA1 5834889 YP_001642030.1 CDS Mext_4591 NC_010172.1 5132090 5133034 R KEGG: rpb:RPB_0997 hypothetical protein; hypothetical protein complement(5132090..5133034) Methylobacterium extorquens PA1 5834890 YP_001642031.1 CDS Mext_4592 NC_010172.1 5133310 5134053 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bja:bll7782 putative 3-oxoacyl-[acyl-carrier-protein] reductase; short-chain dehydrogenase/reductase SDR complement(5133310..5134053) Methylobacterium extorquens PA1 5834891 YP_001642032.1 CDS Mext_4593 NC_010172.1 5134050 5135411 R PFAM: AMP-dependent synthetase and ligase; KEGG: bra:BRADO6291 putative 2-succinylbenzoate--CoA ligase (OSB-CoA synthetase) (o-succinylbenzoyl-CoA synthetase); AMP-dependent synthetase and ligase complement(5134050..5135411) Methylobacterium extorquens PA1 5834892 YP_001642033.1 CDS Mext_4594 NC_010172.1 5135417 5135674 R KEGG: bja:bsl7784 probable acyl carrier protein; putative acyl carrier protein complement(5135417..5135674) Methylobacterium extorquens PA1 5834893 YP_001642034.1 CDS Mext_4595 NC_010172.1 5135712 5136629 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bja:blr0230 probable esterase; alpha/beta hydrolase domain-containing protein complement(5135712..5136629) Methylobacterium extorquens PA1 5834205 YP_001642035.1 CDS Mext_4596 NC_010172.1 5136647 5137579 R KEGG: bja:bll0957 hypothetical protein; hypothetical protein complement(5136647..5137579) Methylobacterium extorquens PA1 5834206 YP_001642036.1 CDS Mext_4597 NC_010172.1 5137720 5138922 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rpa:RPA4598 possible acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(5137720..5138922) Methylobacterium extorquens PA1 5834207 YP_001642037.1 CDS Mext_4598 NC_010172.1 5139018 5139287 R KEGG: bja:bsr0959 hypothetical protein; hypothetical protein complement(5139018..5139287) Methylobacterium extorquens PA1 5834208 YP_001642038.1 CDS Mext_4599 NC_010172.1 5139421 5139996 R PFAM: flavin reductase domain protein FMN-binding; KEGG: atc:AGR_L_2798 hypothetical protein; flavin reductase domain-containing protein complement(5139421..5139996) Methylobacterium extorquens PA1 5834209 YP_001642039.1 CDS Mext_4600 NC_010172.1 5140306 5142009 D catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit; thiamine pyrophosphate protein 5140306..5142009 Methylobacterium extorquens PA1 5834210 YP_001642040.1 CDS Mext_4601 NC_010172.1 5142137 5142460 D hypothetical protein 5142137..5142460 Methylobacterium extorquens PA1 5832249 YP_001642041.1 CDS Mext_4602 NC_010172.1 5142505 5143371 R PFAM: aminotransferase class IV; KEGG: bja:bll0229 branched-chain amino acid aminotransferase; aminotransferase complement(5142505..5143371) Methylobacterium extorquens PA1 5832250 YP_001642042.1 CDS Mext_4603 NC_010172.1 5143398 5143832 R PFAM: protein of unknown function DUF861 cupin_3; KEGG: rpa:RPA4600 hypothetical protein; hypothetical protein complement(5143398..5143832) Methylobacterium extorquens PA1 5832251 YP_001642043.1 CDS Mext_4604 NC_010172.1 5144326 5145618 D KEGG: rpd:RPD_1104 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase 5144326..5145618 Methylobacterium extorquens PA1 5832252 YP_001642044.1 CDS Mext_4605 NC_010172.1 5145652 5146647 D catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 5145652..5146647 Methylobacterium extorquens PA1 5832253 YP_001642045.1 CDS Mext_4606 NC_010172.1 5146659 5148491 D activates fatty acids by binding to coenzyme A; may be involved in acyclic terpene utilization; long-chain-acyl-CoA synthetase 5146659..5148491 Methylobacterium extorquens PA1 5832254 YP_001642046.1 CDS Mext_4607 NC_010172.1 5148611 5149930 R KEGG: aba:Acid345_3798 hypothetical protein; hypothetical protein complement(5148611..5149930) Methylobacterium extorquens PA1 5832243 YP_001642047.1 CDS Mext_4608 NC_010172.1 5150184 5152520 D KEGG: rpe:RPE_3501 O-antigen polymerase; hypothetical protein 5150184..5152520 Methylobacterium extorquens PA1 5832244 YP_001642048.1 CDS Mext_4609 NC_010172.1 5152517 5153404 D hypothetical protein 5152517..5153404 Methylobacterium extorquens PA1 5832245 YP_001642049.1 CDS Mext_4610 NC_010172.1 5153558 5155624 R PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: xau:Xaut_0942 radical SAM domain protein; radical SAM domain-containing protein complement(5153558..5155624) Methylobacterium extorquens PA1 5832246 YP_001642050.1 CDS Mext_4611 NC_010172.1 5155747 5156088 R TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: net:Neut_1702 monovalent cation/proton antiporter, MnhG/PhaG subunit; monovalent cation/proton antiporter subunit MnhG/PhaG complement(5155747..5156088) Methylobacterium extorquens PA1 5832247 YP_001642051.1 CDS Mext_4612 NC_010172.1 5156085 5156369 R PFAM: multiple resistance and pH regulation protein F; KEGG: rpa:RPA2793 multicomponent K+:H+ antiporter subunit F; multiple resistance and pH regulation protein F complement(5156085..5156369) Methylobacterium extorquens PA1 5832248 YP_001642052.1 CDS Mext_4613 NC_010172.1 5156366 5156854 R PFAM: cation antiporter; KEGG: nha:Nham_1007 cation antiporter; cation antiporter complement(5156366..5156854) Methylobacterium extorquens PA1 5832681 YP_001642053.1 CDS Mext_4614 NC_010172.1 5156851 5158536 R subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D complement(5156851..5158536) Methylobacterium extorquens PA1 5832682 YP_001642054.1 CDS Mext_4615 NC_010172.1 5158533 5158901 R subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C complement(5158533..5158901) Methylobacterium extorquens PA1 5832683 YP_001642055.1 CDS Mext_4616 NC_010172.1 5158901 5161840 R subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A complement(5158901..5161840) Methylobacterium extorquens PA1 5832684 YP_001642056.1 CDS Mext_4617 NC_010172.1 5162276 5162497 R hypothetical protein complement(5162276..5162497) Methylobacterium extorquens PA1 5832685 YP_001642057.1 CDS Mext_4618 NC_010172.1 5162959 5164296 D TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: swo:Swol_0617 UDP-glucose 6-dehydrogenase; nucleotide sugar dehydrogenase 5162959..5164296 Methylobacterium extorquens PA1 5832686 YP_001642058.1 CDS Mext_4619 NC_010172.1 5164293 5165264 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: swo:Swol_0618 nucleoside-diphosphate-sugar epimerase; NAD-dependent epimerase/dehydratase 5164293..5165264 Methylobacterium extorquens PA1 5833689 YP_001642059.1 CDS Mext_4620 NC_010172.1 5165275 5166213 D PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: rle:pRL90132 putative GDP-L-fucose synthetase; NAD-dependent epimerase/dehydratase 5165275..5166213 Methylobacterium extorquens PA1 5833690 YP_001642060.1 CDS Mext_4621 NC_010172.1 5166206 5167081 D TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: rpe:RPE_3494 glycosyl transferase, WecB/TagA/CpsF family; WecB/TagA/CpsF family glycosyl transferase 5166206..5167081 Methylobacterium extorquens PA1 5833691 YP_001642061.1 CDS Mext_4622 NC_010172.1 5167090 5168265 D PFAM: glycosyl transferase group 1; KEGG: bra:BRADO7042 putative glycosyltransferase, group 1; group 1 glycosyl transferase 5167090..5168265 Methylobacterium extorquens PA1 5833692 YP_001642062.1 CDS Mext_4623 NC_010172.1 5168430 5168597 R hypothetical protein complement(5168430..5168597) Methylobacterium extorquens PA1 5833693 YP_001642063.1 CDS Mext_4624 NC_010172.1 5168713 5171283 R PFAM: condensation domain protein; phosphopantetheine-binding; KEGG: psb:Psyr_2608 amino acid adenylation; aspartate racemase complement(5168713..5171283) Methylobacterium extorquens PA1 5833694 YP_001642064.1 CDS Mext_4625 NC_010172.1 5171295 5174756 R TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: mes:Meso_2580 amino acid adenylation domain; amino acid adenylation domain-containing protein complement(5171295..5174756) Methylobacterium extorquens PA1 5833801 YP_001642065.1 CDS Mext_4626 NC_010172.1 5175085 5176305 R KEGG: lma:LmjF35.0290 hypothetical protein, conserved; hypothetical protein complement(5175085..5176305) Methylobacterium extorquens PA1 5833802 YP_001642066.1 CDS Mext_4627 NC_010172.1 5176458 5176988 R PFAM: Phosphoglycerate mutase; KEGG: sme:SMc03822 hypothetical protein; phosphoglycerate mutase complement(5176458..5176988) Methylobacterium extorquens PA1 5833803 YP_001642067.1 CDS Mext_4628 NC_010172.1 5176985 5177965 R PFAM: aldo/keto reductase; KEGG: mpt:Mpe_A1746 putative oxidoreductase; aldo/keto reductase complement(5176985..5177965) Methylobacterium extorquens PA1 5833804 YP_001642068.1 CDS Mext_4629 NC_010172.1 5178024 5178362 R PFAM: plasmid stabilization system; KEGG: bbt:BBta_4865 hypothetical protein; plasmid stabilization system protein complement(5178024..5178362) Methylobacterium extorquens PA1 5833805 YP_001642069.1 CDS Mext_4630 NC_010172.1 5178352 5178666 R KEGG: rpe:RPE_1421 putative transcriptional regulators, CopG/Arc/MetJ family; hypothetical protein complement(5178352..5178666) Methylobacterium extorquens PA1 5833806 YP_001642070.1 CDS Mext_4631 NC_010172.1 5178813 5179664 R PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rpd:RPD_3462 ATPase associated with various cellular activities, AAA_5; ATPase central domain-containing protein complement(5178813..5179664) Methylobacterium extorquens PA1 5831607 YP_001642071.1 CDS Mext_4632 NC_010172.1 5179760 5180413 R hypothetical protein complement(5179760..5180413) Methylobacterium extorquens PA1 5831608 YP_001642072.1 CDS Mext_4633 NC_010172.1 5180540 5181835 R hypothetical protein complement(5180540..5181835) Methylobacterium extorquens PA1 5831609 YP_001642073.1 CDS Mext_4634 NC_010172.1 5182081 5183973 D PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: ccr:CC_3496 TrkA family protein; sodium/hydrogen exchanger 5182081..5183973 Methylobacterium extorquens PA1 5831610 YP_001642074.1 CDS murD NC_010172.1 5184008 5185375 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(5184008..5185375) Methylobacterium extorquens PA1 5831611 YP_001642075.1 CDS mraY NC_010172.1 5185399 5186526 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(5185399..5186526) Methylobacterium extorquens PA1 5831612 YP_001642076.1 CDS Mext_4637 NC_010172.1 5186587 5188050 R TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rpb:RPB_1990 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase complement(5186587..5188050) Methylobacterium extorquens PA1 5833439 YP_001642077.1 CDS Mext_4638 NC_010172.1 5188047 5189525 R TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rpb:RPB_1989 UDP-N-acetylmuramyl-tripeptide synthetases; UDP-N-acetylmuramyl tripeptide synthetase complement(5188047..5189525) Methylobacterium extorquens PA1 5833440 YP_001642078.1 CDS Mext_4639 NC_010172.1 5189585 5191462 R PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: bra:BRADO5665 division-specific transpeptidase, penicillin-binding protein; peptidoglycan glycosyltransferase complement(5189585..5191462) Methylobacterium extorquens PA1 5833441 YP_001642079.1 CDS Mext_4640 NC_010172.1 5191470 5191901 R KEGG: bbt:BBta_6181 putative exported protein of unknown function; hypothetical protein complement(5191470..5191901) Methylobacterium extorquens PA1 5833442 YP_001642080.1 CDS mraW NC_010172.1 5191898 5192953 R TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: xau:Xaut_1852 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW complement(5191898..5192953) Methylobacterium extorquens PA1 5833443 YP_001642081.1 CDS Mext_4642 NC_010172.1 5193862 5196306 R KEGG: rpc:RPC_3294 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: NAD-dependent DNA ligase; NAD-dependent DNA ligase complement(5193862..5196306) Methylobacterium extorquens PA1 5834841 YP_001642082.1 CDS Mext_4643 NC_010172.1 5196423 5196743 D hypothetical protein 5196423..5196743 Methylobacterium extorquens PA1 5834842 YP_001642083.1 CDS Mext_4644 NC_010172.1 5196787 5197353 D PFAM: protein of unknown function DUF820; KEGG: ana:alr1460 hypothetical protein; hypothetical protein 5196787..5197353 Methylobacterium extorquens PA1 5834843 YP_001642084.1 CDS Mext_4645 NC_010172.1 5197430 5198443 D PFAM: PfkB domain protein; KEGG: xau:Xaut_2565 PfkB domain protein; ribokinase-like domain-containing protein 5197430..5198443 Methylobacterium extorquens PA1 5834844 YP_001642085.1 CDS Mext_4646 NC_010172.1 5198496 5198918 R PFAM: peptidylprolyl isomerase FKBP-type; KEGG: gvi:glr0841 FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase complement(5198496..5198918) Methylobacterium extorquens PA1 5834845 YP_001642086.1 CDS Mext_4647 NC_010172.1 5198986 5199453 R hypothetical protein complement(5198986..5199453) Methylobacterium extorquens PA1 5835127 YP_001642087.1 CDS Mext_4648 NC_010172.1 5199791 5201011 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bja:blr4370 hypothetical protein; L-carnitine dehydratase/bile acid-inducible protein F 5199791..5201011 Methylobacterium extorquens PA1 5835128 YP_001642088.1 CDS Mext_4649 NC_010172.1 5201035 5201859 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 5201035..5201859 Methylobacterium extorquens PA1 5835129 YP_001642089.1 CDS Mext_4650 NC_010172.1 5201891 5202583 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: csa:Csal_3199 transcriptional regulator, GntR family; regulatory protein GntR complement(5201891..5202583) Methylobacterium extorquens PA1 5835130 YP_001642090.1 CDS Mext_4651 NC_010172.1 5202848 5203891 D PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: rpc:RPC_1602 aromatic amino acid beta-eliminating lyase/threonine aldolase; aromatic amino acid beta-eliminating lyase/threonine aldolase 5202848..5203891 Methylobacterium extorquens PA1 5835131 YP_001642091.1 CDS Mext_4652 NC_010172.1 5204022 5204567 R KEGG: bra:BRADO3437 hypothetical protein; hypothetical protein complement(5204022..5204567) Methylobacterium extorquens PA1 5835132 YP_001642092.1 CDS Mext_4653 NC_010172.1 5204651 5205778 R PFAM: glutamate--cysteine ligase GCS2; KEGG: xau:Xaut_4105 glutamate--cysteine ligase GCS2; glutamate--cysteine ligase complement(5204651..5205778) Methylobacterium extorquens PA1 5835133 YP_001642093.1 CDS Mext_4654 NC_010172.1 5205848 5206219 R hypothetical protein complement(5205848..5206219) Methylobacterium extorquens PA1 5832384 YP_001642094.1 CDS Mext_4655 NC_010172.1 5206216 5207937 R PFAM: peptidase S10 serine carboxypeptidase; KEGG: bbt:BBta_5174 putative peptidase S10, serine carboxypeptidase; peptidase S10 serine carboxypeptidase complement(5206216..5207937) Methylobacterium extorquens PA1 5832385 YP_001642095.1 CDS Mext_4656 NC_010172.1 5207943 5208395 R PFAM: DNA polymerase III chi subunit HolC; KEGG: bja:blr4109 putative DNA polymerase III chi subunit; DNA polymerase III chi subunit HolC complement(5207943..5208395) Methylobacterium extorquens PA1 5832386 YP_001642096.1 CDS Mext_4657 NC_010172.1 5208557 5208862 D KEGG: mgm:Mmc1_2179 putative outer membrane adhesin like proteiin; hypothetical protein 5208557..5208862 Methylobacterium extorquens PA1 5832387 YP_001642097.1 CDS Mext_4658 NC_010172.1 5208940 5210103 R PFAM: glutathionylspermidine synthase; KEGG: bja:bll2198 hypothetical protein; glutathionylspermidine synthase complement(5208940..5210103) Methylobacterium extorquens PA1 5832388 YP_001642098.1 CDS Mext_4659 NC_010172.1 5210103 5210735 R KEGG: pde:Pden_1246 hypothetical protein; hypothetical protein complement(5210103..5210735) Methylobacterium extorquens PA1 5832389 YP_001642099.1 CDS Mext_4660 NC_010172.1 5210740 5211138 R PFAM: protein of unknown function DUF350; KEGG: bja:bll2199 hypothetical protein; hypothetical protein complement(5210740..5211138) Methylobacterium extorquens PA1 5832390 YP_001642100.1 CDS pyrG NC_010172.1 5211158 5212831 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(5211158..5212831) Methylobacterium extorquens PA1 5833548 YP_001642101.1 CDS Mext_4662 NC_010172.1 5212979 5213446 R TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: ret:RHE_CH02185 protein-export translocase protein; preprotein translocase subunit SecG complement(5212979..5213446) Methylobacterium extorquens PA1 5833549 YP_001642102.1 CDS Mext_4663 NC_010172.1 5213749 5214030 D hypothetical protein 5213749..5214030 Methylobacterium extorquens PA1 5833550 YP_001642103.1 CDS Mext_4664 NC_010172.1 5214051 5214515 D KEGG: atc:AGR_C_2481 hypothetical protein; hypothetical protein 5214051..5214515 Methylobacterium extorquens PA1 5833551 YP_001642104.1 CDS Mext_4665 NC_010172.1 5214536 5215048 R hypothetical protein complement(5214536..5215048) Methylobacterium extorquens PA1 5833552 YP_001642105.1 CDS Mext_4666 NC_010172.1 5215045 5215809 R PFAM: triosephosphate isomerase; KEGG: rle:RL2513 putative triosephosphate isomerase; Triose-phosphate isomerase complement(5215045..5215809) Methylobacterium extorquens PA1 5833553 YP_001642106.1 CDS Mext_4667 NC_010172.1 5216044 5217948 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rpa:RPA2889 putative peptidyl-prolyl cis-trans isomerse D; PpiC-type peptidyl-prolyl cis-trans isomerase 5216044..5217948 Methylobacterium extorquens PA1 5833554 YP_001642107.1 CDS Mext_4668 NC_010172.1 5217958 5219478 D KEGG: xau:Xaut_4378 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; anthranilate synthase component I 5217958..5219478 Methylobacterium extorquens PA1 5834429 YP_001642108.1 CDS Mext_4669 NC_010172.1 5219540 5221234 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rru:Rru_A1293 chemotaxis sensory transducer; chemotaxis sensory transducer protein complement(5219540..5221234) Methylobacterium extorquens PA1 5834430 YP_001642109.1 CDS Mext_4670 NC_010172.1 5221510 5222112 D TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: xau:Xaut_4377 glutamine amidotransferase of anthranilate synthase; glutamine amidotransferase of anthranilate synthase 5221510..5222112 Methylobacterium extorquens PA1 5834431 YP_001642110.1 CDS trpD NC_010172.1 5222201 5223214 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 5222201..5223214 Methylobacterium extorquens PA1 5834432 YP_001642111.1 CDS Mext_4672 NC_010172.1 5223349 5224206 D PFAM: Indole-3-glycerol phosphate synthase; KEGG: mes:Meso_1639 indole-3-glycerol phosphate synthase; indole-3-glycerol-phosphate synthase 5223349..5224206 Methylobacterium extorquens PA1 5834433 YP_001642112.1 CDS Mext_4673 NC_010172.1 5224203 5224688 D TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: xau:Xaut_4373 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C 5224203..5224688 Methylobacterium extorquens PA1 5834434 YP_001642113.1 CDS Mext_4674 NC_010172.1 5224685 5225911 D TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: bja:blr4825 molybdopterin biosynthesis protein; molybdenum cofactor synthesis domain-containing protein 5224685..5225911 Methylobacterium extorquens PA1 5834435 YP_001642114.1 CDS fabZ NC_010172.1 5226071 5226532 D in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 5226071..5226532 Methylobacterium extorquens PA1 5834261 YP_001642115.1 CDS Mext_4676 NC_010172.1 5226529 5227344 D catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 5226529..5227344 Methylobacterium extorquens PA1 5834262 YP_001642116.1 CDS Mext_4677 NC_010172.1 5227356 5228204 D PFAM: protein of unknown function DUF1009; KEGG: rpc:RPC_2448 protein of unknown function DUF1009; hypothetical protein 5227356..5228204 Methylobacterium extorquens PA1 5834263 YP_001642117.1 CDS lpxB NC_010172.1 5228201 5229361 D catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 5228201..5229361 Methylobacterium extorquens PA1 5834264 YP_001642118.1 CDS Mext_4679 NC_010172.1 5229358 5229837 D PFAM: protein of unknown function DUF188; KEGG: rpc:RPC_3085 protein of unknown function DUF188; hypothetical protein 5229358..5229837 Methylobacterium extorquens PA1 5834265 YP_001642119.1 CDS Mext_4680 NC_010172.1 5229983 5231323 R KEGG: ret:RHE_CH01926 citrate synthase protein; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I complement(5229983..5231323) Methylobacterium extorquens PA1 5834266 YP_001642120.1 CDS Mext_4681 NC_010172.1 5231748 5233172 R TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: xau:Xaut_4369 glutamyl-tRNA synthetase; glutamyl-tRNA synthetase complement(5231748..5233172) Methylobacterium extorquens PA1 5834267 YP_001642121.1 CDS Mext_4682 NC_010172.1 5233340 5235598 D PFAM: ComEC/Rec2-related protein; KEGG: bja:bll4830 hypothetical protein; ComEC/Rec2-like protein 5233340..5235598 Methylobacterium extorquens PA1 5834233 YP_001642122.1 CDS Mext_4683 NC_010172.1 5235592 5236314 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(5235592..5236314) Methylobacterium extorquens PA1 5834234 YP_001642123.1 CDS Mext_4684 NC_010172.1 5236480 5237133 R PFAM: protein of unknown function DUF1236; KEGG: rpc:RPC_2866 protein of unknown function DUF1236; hypothetical protein complement(5236480..5237133) Methylobacterium extorquens PA1 5834235 YP_001642124.1 CDS Mext_4685 NC_010172.1 5237784 5239139 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: oan:Oant_1720 metabolite/H+ symporter, major facilitator superfamily (MFS); general substrate transporter 5237784..5239139 Methylobacterium extorquens PA1 5834236 YP_001642125.1 CDS Mext_4686 NC_010172.1 5239252 5240076 R PFAM: protein of unknown function DUF849; KEGG: bja:bll5461 hypothetical protein; hypothetical protein complement(5239252..5240076) Methylobacterium extorquens PA1 5834237 YP_001642126.1 CDS Mext_4687 NC_010172.1 5240090 5241169 R KEGG: bbt:BBta_2879 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase complement(5240090..5241169) Methylobacterium extorquens PA1 5834238 YP_001642127.1 CDS Mext_4688 NC_010172.1 5241309 5241782 R hypothetical protein complement(5241309..5241782) Methylobacterium extorquens PA1 5834239 YP_001642128.1 CDS Mext_4689 NC_010172.1 5241893 5242771 R PFAM: aldo/keto reductase; KEGG: gbe:GbCGDNIH1_0254 aldo/keto reductase family protein; aldo/keto reductase complement(5241893..5242771) Methylobacterium extorquens PA1 5832137 YP_001642129.1 CDS Mext_4690 NC_010172.1 5242852 5243577 R KEGG: mfa:Mfla_0988 hypothetical protein; hypothetical protein complement(5242852..5243577) Methylobacterium extorquens PA1 5832138 YP_001642130.1 CDS Mext_4691 NC_010172.1 5243773 5245770 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bja:blr2506 putative chemotaxis protein; chemotaxis sensory transducer protein complement(5243773..5245770) Methylobacterium extorquens PA1 5832139 YP_001642131.1 CDS Mext_4692 NC_010172.1 5246147 5247658 R KEGG: xau:Xaut_3516 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do complement(5246147..5247658) Methylobacterium extorquens PA1 5832140 YP_001642132.1 CDS Mext_4693 NC_010172.1 5247772 5248524 R KEGG: ecx:EcHS_A4169 putative lipoprotein; hypothetical protein complement(5247772..5248524) Methylobacterium extorquens PA1 5832141 YP_001642133.1 CDS Mext_4694 NC_010172.1 5248521 5251241 R TIGRFAM: valyl-tRNA synthetase; KEGG: rpb:RPB_2892 valyl-tRNA synthetase; valyl-tRNA synthetase complement(5248521..5251241) Methylobacterium extorquens PA1 5832142 YP_001642134.1 CDS Mext_4695 NC_010172.1 5251566 5252165 R KEGG: bja:blr4474 hypothetical protein; hypothetical protein complement(5251566..5252165) Methylobacterium extorquens PA1 5832143 YP_001642135.1 CDS Mext_4696 NC_010172.1 5252291 5253784 R TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: rpc:RPC_2568 type I secretion outer membrane protein, TolC; TolC family type I secretion outer membrane protein complement(5252291..5253784) Methylobacterium extorquens PA1 5831848 YP_001642136.1 CDS Mext_4697 NC_010172.1 5254324 5254974 R PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: bbt:BBta_3944 putative protein-L-isoaspartate O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(5254324..5254974) Methylobacterium extorquens PA1 5831849 YP_001642137.1 CDS Mext_4698 NC_010172.1 5255959 5256204 R hypothetical protein complement(5255959..5256204) Methylobacterium extorquens PA1 5831852 YP_001642138.1 CDS Mext_4699 NC_010172.1 5256722 5257024 D hypothetical protein 5256722..5257024 Methylobacterium extorquens PA1 5834341 YP_001642139.1 CDS Mext_4700 NC_010172.1 5257471 5257668 D KEGG: net:Neut_1746 integrase, catalytic region; integrase catalytic subunit 5257471..5257668 Methylobacterium extorquens PA1 5834342 YP_001642140.1 CDS Mext_4701 NC_010172.1 5257992 5258222 R hypothetical protein complement(5257992..5258222) Methylobacterium extorquens PA1 5834343 YP_001642141.1 CDS Mext_4702 NC_010172.1 5259211 5259435 R KEGG: rxy:Rxyl_3078 hypothetical protein; hypothetical protein complement(5259211..5259435) Methylobacterium extorquens PA1 5834344 YP_001642142.1 CDS Mext_4703 NC_010172.1 5259963 5260337 R KEGG: smd:Smed_2010 hypothetical protein; hypothetical protein complement(5259963..5260337) Methylobacterium extorquens PA1 5834345 YP_001642143.1 CDS Mext_4704 NC_010172.1 5260513 5260788 R hypothetical protein complement(5260513..5260788) Methylobacterium extorquens PA1 5834346 YP_001642144.1 CDS Mext_4705 NC_010172.1 5260816 5261070 R hypothetical protein complement(5260816..5261070) Methylobacterium extorquens PA1 5834347 YP_001642145.1 CDS Mext_4706 NC_010172.1 5261264 5261431 R KEGG: aav:Aave_3825 hypothetical protein; hypothetical protein complement(5261264..5261431) Methylobacterium extorquens PA1 5832549 YP_001642146.1 CDS Mext_4707 NC_010172.1 5261500 5262396 R TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: hydroxyethylthiazole kinase; protein of unknown function UPF0031; KEGG: xcv:XCV1201 hypothetical protein; carbohydrate kinase complement(5261500..5262396) Methylobacterium extorquens PA1 5832550 YP_001642147.1 CDS Mext_4708 NC_010172.1 5262625 5262915 D hypothetical protein 5262625..5262915 Methylobacterium extorquens PA1 5832551 YP_001642148.1 CDS Mext_4709 NC_010172.1 5262989 5263351 D KEGG: rsh:Rsph17029_1329 hypothetical protein; hypothetical protein 5262989..5263351 Methylobacterium extorquens PA1 5832552 YP_001642149.1 CDS Mext_4710 NC_010172.1 5263530 5263781 D hypothetical protein 5263530..5263781 Methylobacterium extorquens PA1 5832553 YP_001642150.1 CDS Mext_4711 NC_010172.1 5264653 5264859 D hypothetical protein 5264653..5264859 Methylobacterium extorquens PA1 5832554 YP_001642151.1 CDS Mext_4712 NC_010172.1 5264900 5265175 R hypothetical protein complement(5264900..5265175) Methylobacterium extorquens PA1 5832555 YP_001642152.1 CDS Mext_4713 NC_010172.1 5265595 5266635 D TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: cvi:CV_0938 ABC transporter phosphate-binding protein; phosphate ABC transporter substrate-binding protein 5265595..5266635 Methylobacterium extorquens PA1 5833520 YP_001642153.1 CDS Mext_4714 NC_010172.1 5266750 5267724 D TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_0013 phosphate ABC transporter, inner membrane subunit PstC; phosphate ABC transporter permease 5266750..5267724 Methylobacterium extorquens PA1 5833521 YP_001642154.1 CDS Mext_4715 NC_010172.1 5267823 5268662 D TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll3720 phosphate transport system permease protein pstA; phosphate ABC transporter permease 5267823..5268662 Methylobacterium extorquens PA1 5833522 YP_001642155.1 CDS Mext_4716 NC_010172.1 5268704 5269519 D KEGG: rpd:RPD_0891 phosphate transport system permease protein 1; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase 5268704..5269519 Methylobacterium extorquens PA1 5833523 YP_001642156.1 CDS Mext_4717 NC_010172.1 5269651 5270364 D TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: bja:blr1095 phosphate transport system regulatory protein; phosphate transport system regulatory protein PhoU 5269651..5270364 Methylobacterium extorquens PA1 5833524 YP_001642157.1 CDS Mext_4718 NC_010172.1 5270439 5271158 D TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xau:Xaut_0202 two component transcriptional regulator, winged helix family; phosphate regulon transcriptional regulatory protein PhoB 5270439..5271158 Methylobacterium extorquens PA1 5833525 YP_001642158.1 CDS Mext_4719 NC_010172.1 5271364 5271903 R PFAM: GcrA cell cycle regulator; KEGG: xau:Xaut_1217 GcrA cell cycle regulator; GcrA cell cycle regulator complement(5271364..5271903) Methylobacterium extorquens PA1 5833526 YP_001642159.1 CDS Mext_4720 NC_010172.1 5272415 5273281 D PFAM: Domain of unknown function DUF1849; KEGG: nha:Nham_2446 hypothetical protein; hypothetical protein 5272415..5273281 Methylobacterium extorquens PA1 5832236 YP_001642160.1 CDS Mext_4721 NC_010172.1 5273292 5274569 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(5273292..5274569) Methylobacterium extorquens PA1 5832237 YP_001642161.1 CDS Mext_4722 NC_010172.1 5274626 5275447 D KEGG: bra:BRADO4902 precorrin-6A reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; precorrin-6x reductase 5274626..5275447 Methylobacterium extorquens PA1 5832238 YP_001642162.1 CDS Mext_4723 NC_010172.1 5275473 5276975 D TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: bra:BRADO4913 cobyric acid synthase; cobyric acid synthase CobQ 5275473..5276975 Methylobacterium extorquens PA1 5832239 YP_001642163.1 CDS Mext_4724 NC_010172.1 5277046 5278047 R TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: mlo:mlr1304 cobalamin biosynthetic protein cobD; cobalamin biosynthesis protein CobD complement(5277046..5278047) Methylobacterium extorquens PA1 5832240 YP_001642164.1 CDS Mext_4725 NC_010172.1 5278074 5279069 D TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: bra:BRADO4915 putative threonine-phosphate decarboxylase; L-threonine-O-3-phosphate decarboxylase 5278074..5279069 Methylobacterium extorquens PA1 5832241 YP_001642165.1 CDS Mext_4726 NC_010172.1 5279062 5280246 R PFAM: major facilitator superfamily MFS_1; KEGG: bmn:BMA10247_0490 major facilitator family transporter; major facilitator transporter complement(5279062..5280246) Methylobacterium extorquens PA1 5832242 YP_001642166.1 CDS Mext_4727 NC_010172.1 5280653 5280856 D hypothetical protein 5280653..5280856 Methylobacterium extorquens PA1 5831995 YP_001642167.1 CDS Mext_4728 NC_010172.1 5281058 5282467 D PFAM: Malonyl-CoA decarboxylase; KEGG: smd:Smed_5137 malonyl-CoA decarboxylase; malonyl-CoA decarboxylase 5281058..5282467 Methylobacterium extorquens PA1 5831996 YP_001642168.1 CDS Mext_4729 NC_010172.1 5282604 5282960 D PFAM: CsbD family protein; KEGG: bja:blr1496 hypothetical protein; CsbD family protein 5282604..5282960 Methylobacterium extorquens PA1 5831997 YP_001642169.1 CDS Mext_4730 NC_010172.1 5283111 5283896 R TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bja:blr1488 3-hydroxybutyrate dehydrogenase; 3-hydroxybutyrate dehydrogenase complement(5283111..5283896) Methylobacterium extorquens PA1 5831998 YP_001642170.1 CDS Mext_4731 NC_010172.1 5284101 5285063 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 5284101..5285063 Methylobacterium extorquens PA1 5831999 YP_001642171.1 CDS Mext_4732 NC_010172.1 5285060 5285773 D KEGG: swi:Swit_3999 hypothetical protein; hypothetical protein 5285060..5285773 Methylobacterium extorquens PA1 5832000 YP_001642172.1 CDS Mext_4733 NC_010172.1 5285921 5287309 D PFAM: protein of unknown function DUF949; KEGG: bbt:BBta_7577 putative exported protein of unknown function with transcriptiona regulatory protein domain (C-term); hypothetical protein 5285921..5287309 Methylobacterium extorquens PA1 5832001 YP_001642173.1 CDS rplS NC_010172.1 5287507 5287911 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 5287507..5287911 Methylobacterium extorquens PA1 5832890 YP_001642174.1 CDS Mext_4735 NC_010172.1 5288221 5288490 D KEGG: maq:Maqu_0399 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 5288221..5288490 Methylobacterium extorquens PA1 5832891 YP_001642175.1 CDS Mext_4736 NC_010172.1 5288941 5290137 R TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: azo:azo1337 conserved hypothetical peptidoglycan-binding protein; lytic murein transglycosylase complement(5288941..5290137) Methylobacterium extorquens PA1 5832892 YP_001642176.1 CDS rpsD NC_010172.1 5290590 5291207 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 5290590..5291207 Methylobacterium extorquens PA1 5832893 YP_001642177.1 CDS Mext_4738 NC_010172.1 5291336 5292388 R PFAM: 2-nitropropane dioxygenase NPD; KEGG: bch:Bcen2424_4912 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase complement(5291336..5292388) Methylobacterium extorquens PA1 5832894 YP_001642178.1 CDS Mext_4739 NC_010172.1 5292483 5293379 R KEGG: xau:Xaut_4661 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(5292483..5293379) Methylobacterium extorquens PA1 5832895 YP_001642179.1 CDS Mext_4740 NC_010172.1 5293400 5294110 R KEGG: xau:Xaut_4662 phosphatidylserine decarboxylase related protein; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase complement(5293400..5294110) Methylobacterium extorquens PA1 5832896 YP_001642180.1 CDS Mext_4741 NC_010172.1 5294186 5296174 R PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_4185 ABC transporter related; ABC transporter-like protein complement(5294186..5296174) Methylobacterium extorquens PA1 5832373 YP_001642181.1 CDS Mext_4742 NC_010172.1 5296233 5297768 R PFAM: Peptidoglycan-binding LysM; KEGG: bra:BRADO3522 conserved hypothetical protein; putative C-terminal Lysin domain; peptidoglycan-binding LysM complement(5296233..5297768) Methylobacterium extorquens PA1 5832374 YP_001642182.1 CDS Mext_4743 NC_010172.1 5297985 5298587 D PFAM: conserved hypothetical protein; KEGG: xau:Xaut_4183 hypothetical protein; hypothetical protein 5297985..5298587 Methylobacterium extorquens PA1 5832375 YP_001642183.1 CDS Mext_4744 NC_010172.1 5298587 5299378 D KEGG: xau:Xaut_2554 hypothetical protein; hypothetical protein 5298587..5299378 Methylobacterium extorquens PA1 5832376 YP_001642184.1 CDS cysS NC_010172.1 5299434 5300822 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(5299434..5300822) Methylobacterium extorquens PA1 5832377 YP_001642185.1 CDS Mext_4746 NC_010172.1 5301151 5301474 D KEGG: rpe:RPE_1997 hypothetical protein; hypothetical protein 5301151..5301474 Methylobacterium extorquens PA1 5832378 YP_001642186.1 CDS Mext_4747 NC_010172.1 5301488 5302042 R PFAM: CreA family protein; KEGG: xau:Xaut_4719 CreA family protein; CreA family protein complement(5301488..5302042) Methylobacterium extorquens PA1 5832379 YP_001642187.1 CDS Mext_4748 NC_010172.1 5302116 5303216 D KEGG: bja:bll3788 hypothetical protein; hypothetical protein 5302116..5303216 Methylobacterium extorquens PA1 5834552 YP_001642188.1 CDS Mext_4749 NC_010172.1 5303380 5305533 D PFAM: OmpA/MotB domain protein; KEGG: rpa:RPA0213 possible OmpA family member; OmpA/MotB domain-containing protein 5303380..5305533 Methylobacterium extorquens PA1 5834553 YP_001642189.1 CDS Mext_4750 NC_010172.1 5305706 5306920 D PFAM: major facilitator superfamily MFS_1; KEGG: pau:PA14_66510 putative MFS transporter; major facilitator transporter 5305706..5306920 Methylobacterium extorquens PA1 5834554 YP_001642190.1 CDS Mext_4751 NC_010172.1 5307009 5307500 D PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: rpe:RPE_1372 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 5307009..5307500 Methylobacterium extorquens PA1 5834555 YP_001642191.1 CDS Mext_4752 NC_010172.1 5307497 5308276 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: xau:Xaut_0336 methyltransferase type 11; type 11 methyltransferase 5307497..5308276 Methylobacterium extorquens PA1 5834556 YP_001642192.1 CDS Mext_4753 NC_010172.1 5308273 5309622 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(5308273..5309622) Methylobacterium extorquens PA1 5834557 YP_001642193.1 CDS Mext_4754 NC_010172.1 5309679 5310758 R PFAM: secretion protein HlyD family protein; KEGG: bja:blr0261 hypothetical protein; secretion protein HlyD family protein complement(5309679..5310758) Methylobacterium extorquens PA1 5834558 YP_001642194.1 CDS Mext_4755 NC_010172.1 5310755 5310949 R PFAM: protein of unknown function DUF1656; KEGG: pen:PSEEN1299 hypothetical protein; hypothetical protein complement(5310755..5310949) Methylobacterium extorquens PA1 5834781 YP_001642195.1 CDS Mext_4756 NC_010172.1 5310958 5312994 R PFAM: Fusaric acid resistance protein conserved region; KEGG: bja:blr0260 hypothetical protein; fusaric acid resistance protein region complement(5310958..5312994) Methylobacterium extorquens PA1 5834782 YP_001642196.1 CDS Mext_4757 NC_010172.1 5312991 5313425 R KEGG: swi:Swit_0866 hypothetical protein; hypothetical protein complement(5312991..5313425) Methylobacterium extorquens PA1 5834783 YP_001642197.1 CDS Mext_4758 NC_010172.1 5313588 5313869 R hypothetical protein complement(5313588..5313869) Methylobacterium extorquens PA1 5834784 YP_001642198.1 CDS Mext_4759 NC_010172.1 5314229 5314864 D PFAM: Glutathione S-transferase domain; KEGG: xau:Xaut_3798 glutathione S-transferase domain; glutathione S-transferase domain-containing protein 5314229..5314864 Methylobacterium extorquens PA1 5834785 YP_001642199.1 CDS Mext_4760 NC_010172.1 5315765 5317105 R TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; WD40 domain protein beta Propeller; KEGG: rpe:RPE_4707 transport system periplasmic component; beta-propeller repeat-containing to-pal system protein TolB complement(5315765..5317105) Methylobacterium extorquens PA1 5834786 YP_001642200.1 CDS Mext_4761 NC_010172.1 5317184 5318599 R TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA; KEGG: olu:OSTLU_30657 predicted protein; protein TolA complement(5317184..5318599) Methylobacterium extorquens PA1 5834787 YP_001642201.1 CDS Mext_4762 NC_010172.1 5318614 5319063 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: smd:Smed_2629 biopolymer transport TolR; biopolymer transport protein ExbD/TolR complement(5318614..5319063) Methylobacterium extorquens PA1 5835717 YP_001642202.1 CDS Mext_4763 NC_010172.1 5319113 5319829 R TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: xau:Xaut_3059 Tol-Pal system TolQ; protein TolQ complement(5319113..5319829) Methylobacterium extorquens PA1 5835718 YP_001642203.1 CDS Mext_4764 NC_010172.1 5320269 5321519 D PFAM: chemotaxis sensory transducer; KEGG: rru:Rru_A1053 chemotaxis sensory transducer; chemotaxis sensory transducer protein 5320269..5321519 Methylobacterium extorquens PA1 5835719 YP_001642204.1 CDS Mext_4765 NC_010172.1 5321506 5321967 R TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: rpc:RPC_4799 4-hydroxybenzoyl-CoA thioesterase; tol-pal system-associated acyl-CoA thioesterase complement(5321506..5321967) Methylobacterium extorquens PA1 5835720 YP_001642205.1 CDS Mext_4766 NC_010172.1 5322108 5322824 R hypothetical protein complement(5322108..5322824) Methylobacterium extorquens PA1 5835721 YP_001642206.1 CDS Mext_4767 NC_010172.1 5323130 5324071 R PFAM: metallophosphoesterase; KEGG: mlo:mll3894 hypothetical protein; metallophosphoesterase complement(5323130..5324071) Methylobacterium extorquens PA1 5835722 YP_001642207.1 CDS ruvB NC_010172.1 5324064 5325134 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(5324064..5325134) Methylobacterium extorquens PA1 5835723 YP_001642208.1 CDS Mext_4769 NC_010172.1 5325385 5327157 D PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mes:Meso_1133 twin-arginine translocation pathway signal; peptidoglycan binding domain-containing protein 5325385..5327157 Methylobacterium extorquens PA1 5835310 YP_001642209.1 CDS Mext_4770 NC_010172.1 5327305 5327832 D PFAM: Ferritin Dps family protein; KEGG: rle:RL0342 putative ferritin-family protein; ferritin Dps family protein 5327305..5327832 Methylobacterium extorquens PA1 5835311 YP_001642210.1 CDS Mext_4771 NC_010172.1 5327942 5330644 R PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: xac:XAC4077 conserved hypothetical protein; N-acetyltransferase GCN5 complement(5327942..5330644) Methylobacterium extorquens PA1 5835312 YP_001642211.1 CDS Mext_4772 NC_010172.1 5330989 5331639 D PFAM: class II aldolase/adducin family protein; KEGG: bja:bll6170 L-fuculose phosphate aldolase; L-fuculose phosphate aldolase 5330989..5331639 Methylobacterium extorquens PA1 5835313 YP_001642212.1 CDS Mext_4773 NC_010172.1 5332232 5332759 D PFAM: ROSMUCR transcriptional regulator; KEGG: xau:Xaut_2842 transcriptional regulator, MucR family; ROSMUCR transcriptional regulator 5332232..5332759 Methylobacterium extorquens PA1 5835314 YP_001642213.1 CDS Mext_4774 NC_010172.1 5332979 5333761 D PFAM: restriction endonuclease; KEGG: pmm:PMM1014 hypothetical protein; restriction endonuclease 5332979..5333761 Methylobacterium extorquens PA1 5835315 YP_001642214.1 CDS Mext_4775 NC_010172.1 5333764 5335065 R PFAM: PepSY-associated TM helix domain protein; KEGG: bja:blr4505 hypothetical protein; PepSY-associated TM helix domain-containing protein complement(5333764..5335065) Methylobacterium extorquens PA1 5835316 YP_001642215.1 CDS Mext_4776 NC_010172.1 5335544 5337727 D KEGG: bja:bll0910 penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; 1A family penicillin-binding protein 5335544..5337727 Methylobacterium extorquens PA1 5835435 YP_001642216.1 CDS Mext_4777 NC_010172.1 5338022 5339089 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rle:RL1602 putative transmembrane adenylate cyclase; adenylyl cyclase class-3/4/guanylyl cyclase 5338022..5339089 Methylobacterium extorquens PA1 5835436 YP_001642217.1 CDS Mext_4778 NC_010172.1 5339108 5339506 R KEGG: acr:Acry_1919 uncharacterized relative of glutathione S-transferase MAPEG superfamily-like protein; hypothetical protein complement(5339108..5339506) Methylobacterium extorquens PA1 5835437 YP_001642218.1 CDS Mext_4779 NC_010172.1 5339809 5340708 D PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rpc:RPC_4741 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 5339809..5340708 Methylobacterium extorquens PA1 5835438 YP_001642219.1 CDS Mext_4780 NC_010172.1 5340698 5341222 D KEGG: rpb:RPB_1821 hypothetical protein; hypothetical protein 5340698..5341222 Methylobacterium extorquens PA1 5835439 YP_001642220.1 CDS Mext_4781 NC_010172.1 5341247 5341591 R hypothetical protein complement(5341247..5341591) Methylobacterium extorquens PA1 5835440 YP_001642221.1 CDS Mext_4782 NC_010172.1 5341727 5343367 R TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: xau:Xaut_1166 chaperonin GroEL; chaperonin GroEL complement(5341727..5343367) Methylobacterium extorquens PA1 5835441 YP_001642222.1 CDS groES NC_010172.1 5343460 5343750 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(5343460..5343750) Methylobacterium extorquens PA1 5835201 YP_001642223.1 CDS Mext_4784 NC_010172.1 5343965 5344969 D PFAM: Mg2 transporter protein CorA family protein; KEGG: mlo:mlr9579 magnesium and cobalt transport protein; Mg2 transporter protein CorA family protein 5343965..5344969 Methylobacterium extorquens PA1 5835202 YP_001642224.1 CDS Mext_4785 NC_010172.1 5345012 5345653 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bch:Bcen2424_6435 multiple antibiotic resistance (MarC)-related proteins; multiple antibiotic resistance (MarC)-like protein complement(5345012..5345653) Methylobacterium extorquens PA1 5835203 YP_001642225.1 CDS Mext_4786 NC_010172.1 5345830 5347290 D KEGG: noc:Noc_2481 polysaccharide biosynthesis protein; O-antigen and teichoic acid-like export protein 5345830..5347290 Methylobacterium extorquens PA1 5835204 YP_001642226.1 CDS Mext_4787 NC_010172.1 5347423 5348613 D PFAM: FAD linked oxidase domain protein; KEGG: sme:SMc00833 probable glycolate oxidase subunit protein; FAD linked oxidase domain-containing protein 5347423..5348613 Methylobacterium extorquens PA1 5835205 YP_001642227.1 CDS Mext_4788 NC_010172.1 5348627 5350267 R PFAM: phosphate transporter; KEGG: pfl:PFL_4546 low-affinity inorganic phosphate transporter; phosphate transporter complement(5348627..5350267) Methylobacterium extorquens PA1 5835206 YP_001642228.1 CDS Mext_4789 NC_010172.1 5350594 5350803 D hypothetical protein 5350594..5350803 Methylobacterium extorquens PA1 5835207 YP_001642229.1 CDS Mext_4790 NC_010172.1 5350903 5351088 D hypothetical protein 5350903..5351088 Methylobacterium extorquens PA1 5834811 YP_001642230.1 CDS Mext_4791 NC_010172.1 5351097 5351399 D KEGG: bbt:BBta_5378 hypothetical protein; hypothetical protein 5351097..5351399 Methylobacterium extorquens PA1 5834812 YP_001642231.1 CDS glpD NC_010172.1 5351396 5352913 D in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 5351396..5352913 Methylobacterium extorquens PA1 5834813 YP_001642232.1 CDS Mext_4793 NC_010172.1 5352901 5354334 R KEGG: nwi:Nwi_1075 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase complement(5352901..5354334) Methylobacterium extorquens PA1 5834814 YP_001642233.1 CDS Mext_4794 NC_010172.1 5354528 5356693 R MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase complement(5354528..5356693) Methylobacterium extorquens PA1 5834815 YP_001642234.1 CDS Mext_4795 NC_010172.1 5356799 5357299 R hypothetical protein complement(5356799..5357299) Methylobacterium extorquens PA1 5834816 YP_001642235.1 CDS Mext_4796 NC_010172.1 5357415 5358344 D PFAM: protein of unknown function DUF817; KEGG: bra:BRADO1358 hypothetical protein; hypothetical protein 5357415..5358344 Methylobacterium extorquens PA1 5834374 YP_001642236.1 CDS Mext_4797 NC_010172.1 5358337 5358552 R hypothetical protein complement(5358337..5358552) Methylobacterium extorquens PA1 5834375 YP_001642237.1 CDS Mext_4798 NC_010172.1 5359070 5360215 D PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpc:RPC_1127 peptidase S1 and S6, chymotrypsin/Hap; 2-alkenal reductase 5359070..5360215 Methylobacterium extorquens PA1 5834376 YP_001642238.1 CDS Mext_4799 NC_010172.1 5360738 5361433 D PFAM: heat shock protein DnaJ domain protein; KEGG: rpb:RPB_2392 heat shock protein DnaJ-like; heat shock protein DnaJ domain-containing protein 5360738..5361433 Methylobacterium extorquens PA1 5834377 YP_001642239.1 CDS Mext_4800 NC_010172.1 5361562 5363046 R PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; KEGG: rpb:RPB_2393 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase complement(5361562..5363046) Methylobacterium extorquens PA1 5834378 YP_001642240.1 CDS Mext_4801 NC_010172.1 5363537 5363875 D PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: xau:Xaut_4537 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 5363537..5363875 Methylobacterium extorquens PA1 5834379 YP_001642241.1 CDS Mext_4802 NC_010172.1 5363898 5366381 D KEGG: xau:Xaut_4536 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 5363898..5366381 Methylobacterium extorquens PA1 5834380 YP_001642242.1 CDS Mext_4803 NC_010172.1 5366518 5366790 D hypothetical protein 5366518..5366790 Methylobacterium extorquens PA1 5835238 YP_001642243.1 CDS Mext_4804 NC_010172.1 5366803 5368074 R catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase complement(5366803..5368074) Methylobacterium extorquens PA1 5835239 YP_001642244.1 CDS Mext_4805 NC_010172.1 5368076 5368885 R KEGG: hha:Hhal_1628 hypothetical protein; hypothetical protein complement(5368076..5368885) Methylobacterium extorquens PA1 5835240 YP_001642245.1 CDS Mext_4806 NC_010172.1 5368887 5369981 R oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis; magnesium-protoporphyrin IX monomethyl ester cyclase complement(5368887..5369981) Methylobacterium extorquens PA1 5835241 YP_001642246.1 CDS Mext_4807 NC_010172.1 5369978 5370304 R KEGG: rpc:RPC_1322 hypothetical protein; hypothetical protein complement(5369978..5370304) Methylobacterium extorquens PA1 5835242 YP_001642247.1 CDS Mext_4808 NC_010172.1 5370304 5370774 R KEGG: bbt:BBta_6409 hypothetical protein; hypothetical protein complement(5370304..5370774) Methylobacterium extorquens PA1 5835243 YP_001642248.1 CDS Mext_4809 NC_010172.1 5370790 5371494 R KEGG: rpa:RPA1549 possible photosynthetic complex assembly protein; putative photosynthetic complex assembly protein complement(5370790..5371494) Methylobacterium extorquens PA1 5833775 YP_001642249.1 CDS Mext_4810 NC_010172.1 5371506 5372279 R TIGRFAM: photosynthetic reaction center H subunit; PFAM: Photosynthetic reaction centre H subunit; KEGG: bbt:BBta_6411 reaction center protein H chain (photosynthetic reaction center H subunit); photosynthetic reaction center subunit H complement(5371506..5372279) Methylobacterium extorquens PA1 5833776 YP_001642250.1 CDS Mext_4811 NC_010172.1 5372294 5373739 R PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: bra:BRADO1644 photosynthetic complex (LH1) assembly protein LhaA, major facilitator superfamily (MFS) transporter; PUCC protein complement(5372294..5373739) Methylobacterium extorquens PA1 5833777 YP_001642251.1 CDS Mext_4812 NC_010172.1 5373736 5374470 R catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine; Mg-protoporphyrin IX methyl transferase complement(5373736..5374470) Methylobacterium extorquens PA1 5833778 YP_001642252.1 CDS chlL NC_010172.1 5374467 5375360 R light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production; protochlorophyllide reductase iron-sulfur ATP-binding protein complement(5374467..5375360) Methylobacterium extorquens PA1 5833779 YP_001642253.1 CDS bchH NC_010172.1 5375357 5379073 R involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; the enzyme from Rhodobacter capsulatus contains an Fe-S cluster; part of a complex with BchI, BchD, and BchH; magnesium chelatase subunit H complement(5375357..5379073) Methylobacterium extorquens PA1 5833780 YP_001642254.1 CDS Mext_4815 NC_010172.1 5379048 5380643 R light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit B complement(5379048..5380643) Methylobacterium extorquens PA1 5833781 YP_001642255.1 CDS Mext_4816 NC_010172.1 5380649 5381917 R light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit N complement(5380649..5381917) Methylobacterium extorquens PA1 5833882 YP_001642256.1 CDS Mext_4817 NC_010172.1 5381914 5382417 R PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: bbt:BBta_6418 2-vinyl bacteriochlorophyllide hydratase; 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD complement(5381914..5382417) Methylobacterium extorquens PA1 5833883 YP_001642257.1 CDS Mext_4818 NC_010172.1 5382674 5383561 D KEGG: rpd:RPD_3738 cobalamin B12-binding; cobalamin B12-binding 5382674..5383561 Methylobacterium extorquens PA1 5833884 YP_001642258.1 CDS Mext_4819 NC_010172.1 5383589 5385049 D KEGG: rru:Rru_A0626 transcriptional regulator, fis family; TIGRFAM: transcriptional regulator PpsR; PFAM: helix-turn-helix Fis-type; PAS fold domain protein; SMART: PAS domain containing protein; transcriptional regulator PpsR 5383589..5385049 Methylobacterium extorquens PA1 5833885 YP_001642259.1 CDS Mext_4820 NC_010172.1 5385172 5386059 D TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: rru:Rru_A0627 bacteriochlorophyll/chlorophyll synthetase; bacteriochlorophyll/chlorophyll a synthase 5385172..5386059 Methylobacterium extorquens PA1 5833886 YP_001642260.1 CDS Mext_4821 NC_010172.1 5386056 5387435 D PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rpe:RPE_1337 PucC protein; PUCC protein 5386056..5387435 Methylobacterium extorquens PA1 5833887 YP_001642261.1 CDS Mext_4822 NC_010172.1 5387440 5388633 D TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: rpd:RPD_3745 geranylgeranyl reductase; geranylgeranyl reductase 5387440..5388633 Methylobacterium extorquens PA1 5833888 YP_001642262.1 CDS Mext_4823 NC_010172.1 5388630 5389139 D PFAM: TspO/MBR family protein; KEGG: mpt:Mpe_A2778 tryptophan-rich sensory protein; TspO/MBR family protein 5388630..5389139 Methylobacterium extorquens PA1 5832144 YP_001642263.1 CDS Mext_4824 NC_010172.1 5389143 5389508 D KEGG: rru:Rru_A0630 hypothetical protein; hypothetical protein 5389143..5389508 Methylobacterium extorquens PA1 5832145 YP_001642264.1 CDS Mext_4825 NC_010172.1 5389552 5391147 D PFAM: cytochrome c class I; KEGG: pnu:Pnuc_0555 cytochrome c, class I; gluconate 2-dehydrogenase 5389552..5391147 Methylobacterium extorquens PA1 5832146 YP_001642265.1 CDS Mext_4826 NC_010172.1 5391322 5392314 D similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 5391322..5392314 Methylobacterium extorquens PA1 5832147 YP_001642266.1 CDS Mext_4827 NC_010172.1 5392311 5393042 D TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: rpc:RPC_3673 6-phosphogluconolactonase; 6-phosphogluconolactonase 5392311..5393042 Methylobacterium extorquens PA1 5832148 YP_001642267.1 CDS Mext_4828 NC_010172.1 5393155 5393721 D KEGG: sco:SCO7123 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase); hypothetical protein 5393155..5393721 Methylobacterium extorquens PA1 5832149 YP_001642268.1 CDS Mext_4829 NC_010172.1 5393835 5395607 R responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA; cyclic beta-1,2-glucan ABc transporter complement(5393835..5395607) Methylobacterium extorquens PA1 5832150 YP_001642269.1 CDS Mext_4830 NC_010172.1 5395833 5396651 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpd:RPD_2078 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 5395833..5396651 Methylobacterium extorquens PA1 5832009 YP_001642270.1 CDS Mext_4831 NC_010172.1 5396666 5397499 D PFAM: OmpA/MotB domain protein; KEGG: bja:blr3801 probable chemotaxis protein; OmpA/MotB domain-containing protein 5396666..5397499 Methylobacterium extorquens PA1 5832010 YP_001642271.1 CDS Mext_4832 NC_010172.1 5397521 5397949 R PFAM: SCP-like extracellular; KEGG: bja:blr1486 hypothetical protein; hypothetical protein complement(5397521..5397949) Methylobacterium extorquens PA1 5832011 YP_001642272.1 CDS Mext_4833 NC_010172.1 5398152 5400995 R PFAM: MscS Mechanosensitive ion channel; KEGG: xau:Xaut_2094 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS complement(5398152..5400995) Methylobacterium extorquens PA1 5832012 YP_001642273.1 CDS Mext_4834 NC_010172.1 5401595 5402143 D PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: rru:Rru_A3733 HNH endonuclease; HNH endonuclease 5401595..5402143 Methylobacterium extorquens PA1 5832013 YP_001642274.1 CDS Mext_4835 NC_010172.1 5402435 5403376 R PFAM: porin; KEGG: rpa:RPA4315 hypothetical protein; porin complement(5402435..5403376) Methylobacterium extorquens PA1 5832014 YP_001642275.1 CDS Mext_4836 NC_010172.1 5403601 5404458 R PFAM: porin opacity type; porin; KEGG: nwi:Nwi_2971 hypothetical protein; opacity type porin complement(5403601..5404458) Methylobacterium extorquens PA1 5832015 YP_001642276.1 CDS Mext_4837 NC_010172.1 5404639 5405502 R KEGG: rpa:RPA4316 hypothetical protein; hypothetical protein complement(5404639..5405502) Methylobacterium extorquens PA1 5835682 YP_001642277.1 CDS glmM NC_010172.1 5405766 5407106 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(5405766..5407106) Methylobacterium extorquens PA1 5835683 YP_001642278.1 CDS Mext_4839 NC_010172.1 5407293 5408042 R PFAM: protein of unknown function DUF81; KEGG: bpe:BP2176 putative inner membrane protein; hypothetical protein complement(5407293..5408042) Methylobacterium extorquens PA1 5835684 YP_001642279.1 CDS Mext_4840 NC_010172.1 5408158 5410086 R KEGG: xau:Xaut_3083 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH complement(5408158..5410086) Methylobacterium extorquens PA1 5835685 YP_001642280.1 CDS Mext_4841 NC_010172.1 5410224 5411252 R TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: xau:Xaut_3082 tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase complement(5410224..5411252) Methylobacterium extorquens PA1 5835686 YP_001642281.1 CDS Mext_4842 NC_010172.1 5411249 5412274 R TIGRFAM: tol-pal system protein YbgF; KEGG: bja:bll7148 hypothetical protein; tol-pal system protein YbgF complement(5411249..5412274) Methylobacterium extorquens PA1 5835687 YP_001642282.1 CDS Mext_4843 NC_010172.1 5412448 5412960 R TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: rpb:RPB_1815 OmpA/MotB; peptidoglycan-associated lipoprotein complement(5412448..5412960) Methylobacterium extorquens PA1 5835327 YP_001642283.1 CDS Mext_4844 NC_010172.1 5413345 5413698 R hypothetical protein complement(5413345..5413698) Methylobacterium extorquens PA1 5835328 YP_001642284.1 CDS Mext_4845 NC_010172.1 5413801 5414199 D PFAM: response regulator receiver; KEGG: ppu:PP_2354 sensory box histidine kinase/response regulator; response regulator receiver 5413801..5414199 Methylobacterium extorquens PA1 5835329 YP_001642285.1 CDS Mext_4846 NC_010172.1 5414295 5415317 R KEGG: bte:BTH_I2812 hypothetical protein; hypothetical protein complement(5414295..5415317) Methylobacterium extorquens PA1 5835330 YP_001642286.1 CDS Mext_4847 NC_010172.1 5415365 5416426 D PFAM: GSCFA domain protein; KEGG: swi:Swit_3997 GSCFA; GSCFA domain-containing protein 5415365..5416426 Methylobacterium extorquens PA1 5835331 YP_001642287.1 CDS Mext_4848 NC_010172.1 5416572 5417501 R KEGG: rru:Rru_A3568 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase complement(5416572..5417501) Methylobacterium extorquens PA1 5835332 YP_001642288.1 CDS Mext_4849 NC_010172.1 5418080 5419789 R KEGG: reh:H16_A0784 gamma-glutamyltransferase 2; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(5418080..5419789) Methylobacterium extorquens PA1 5834897 YP_001642289.1 CDS Mext_4850 NC_010172.1 5419867 5420805 R PFAM: polysaccharide deacetylase; KEGG: vei:Veis_3554 hypothetical protein; polysaccharide deacetylase complement(5419867..5420805) Methylobacterium extorquens PA1 5834898 YP_001642290.1 CDS Mext_4851 NC_010172.1 5420802 5423273 R PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_2083 inner-membrane translocator ABC transporter; ABC transporter-like protein complement(5420802..5423273) Methylobacterium extorquens PA1 5834899 YP_001642291.1 CDS Mext_4852 NC_010172.1 5423276 5424145 R PFAM: inner-membrane translocator; KEGG: rpb:RPB_2082 inner-membrane translocator; inner-membrane translocator complement(5423276..5424145) Methylobacterium extorquens PA1 5834900 YP_001642292.1 CDS Mext_4853 NC_010172.1 5424195 5425385 R PFAM: Extracellular ligand-binding receptor; KEGG: rpb:RPB_2081 twin-arginine translocation pathway signal; extracellular ligand-binding receptor complement(5424195..5425385) Methylobacterium extorquens PA1 5834901 YP_001642293.1 CDS Mext_4854 NC_010172.1 5425596 5426006 D KEGG: rpb:RPB_2080 hypothetical protein; hypothetical protein 5425596..5426006 Methylobacterium extorquens PA1 5834902 YP_001642294.1 CDS Mext_4855 NC_010172.1 5426011 5426712 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rpb:RPB_2079 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(5426011..5426712) Methylobacterium extorquens PA1 5834937 YP_001642295.1 CDS Mext_4856 NC_010172.1 5426709 5426987 R hypothetical protein complement(5426709..5426987) Methylobacterium extorquens PA1 5834938 YP_001642296.1 CDS Mext_4857 NC_010172.1 5427140 5427535 R hypothetical protein complement(5427140..5427535) Methylobacterium extorquens PA1 5834939 YP_001642297.1 CDS Mext_4858 NC_010172.1 5428496 5428876 D hypothetical protein 5428496..5428876 Methylobacterium extorquens PA1 5834940 YP_001642298.1 CDS Mext_4859 NC_010172.1 5428951 5429967 R PFAM: helix-turn-helix domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: nca:Noca_1313 PAS sensor protein; PAS domain-containing protein complement(5428951..5429967) Methylobacterium extorquens PA1 5834941 YP_001642299.1 CDS Mext_4860 NC_010172.1 5430092 5430331 R hypothetical protein complement(5430092..5430331) Methylobacterium extorquens PA1 5834942 YP_001642300.1 CDS Mext_4861 NC_010172.1 5430363 5431697 R PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_4631 D-galactonate transporter; major facilitator transporter complement(5430363..5431697) Methylobacterium extorquens PA1 5835032 YP_001642301.1 CDS Mext_4862 NC_010172.1 5431947 5432480 D PFAM: protein of unknown function DUF892; KEGG: rpb:RPB_3832 protein of unknown function DUF892; hypothetical protein 5431947..5432480 Methylobacterium extorquens PA1 5835033 YP_001642302.1 CDS Mext_4863 NC_010172.1 5432668 5434161 D PFAM: protein of unknown function UPF0061; KEGG: rpe:RPE_3277 protein of unknown function UPF0061; hypothetical protein 5432668..5434161 Methylobacterium extorquens PA1 5835034 YP_001642303.1 CDS Mext_4864 NC_010172.1 5434826 5436601 D TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: xau:Xaut_1488 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit 5434826..5436601 Methylobacterium extorquens PA1 5835035 YP_001642304.1 CDS Mext_4865 NC_010172.1 5436662 5437573 R KEGG: bxe:Bxe_A3033 hypothetical protein; hypothetical protein complement(5436662..5437573) Methylobacterium extorquens PA1 5835036 YP_001642305.1 CDS Mext_4866 NC_010172.1 5437680 5438222 D TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: rpc:RPC_3253 acetolactate synthase, small subunit; acetolactate synthase small subunit 5437680..5438222 Methylobacterium extorquens PA1 5835037 YP_001642306.1 CDS Mext_4867 NC_010172.1 5438285 5438929 D PFAM: Glutathione S-transferase domain; KEGG: bbt:BBta_0613 putative glutathione S-transferase; glutathione S-transferase domain-containing protein 5438285..5438929 Methylobacterium extorquens PA1 5835038 YP_001642307.1 CDS Mext_4868 NC_010172.1 5439153 5440922 D KEGG: bra:BRADO0860 asparagine synthetase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase family amidotransferase; PFAM: glutamine amidotransferase class-II; asparagine synthase; asparagine synthase amidotransferase 5439153..5440922 Methylobacterium extorquens PA1 5834248 YP_001642308.1 CDS Mext_4869 NC_010172.1 5441078 5441917 D PFAM: glutamine amidotransferase class-II; KEGG: bbt:BBta_7207 putative glutamine amidotransferase, class-II; glutamine amidotransferase 5441078..5441917 Methylobacterium extorquens PA1 5834249 YP_001642309.1 CDS Mext_4870 NC_010172.1 5442060 5442806 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mes:Meso_3107 RNA polymerase, sigma-24 subunit, ECF subfamily; sigma-70 family RNA polymerase sigma factor complement(5442060..5442806) Methylobacterium extorquens PA1 5834250 YP_001642310.1 CDS Mext_4871 NC_010172.1 5443094 5445055 D KEGG: gka:GK1520 hypothetical protein; hypothetical protein 5443094..5445055 Methylobacterium extorquens PA1 5834251 YP_001642311.1 CDS Mext_4872 NC_010172.1 5445219 5445476 D hypothetical protein 5445219..5445476 Methylobacterium extorquens PA1 5834252 YP_001642312.1 CDS Mext_4873 NC_010172.1 5445697 5446743 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: rru:Rru_A0664 signal transduction histidine kinase; histidine kinase dimerisation/phosphoacceptor complement(5445697..5446743) Methylobacterium extorquens PA1 5834253 YP_001642313.1 CDS Mext_4874 NC_010172.1 5446740 5447186 R PFAM: response regulator receiver; KEGG: mlo:mlr5738 two-component response regulator; response regulator receiver complement(5446740..5447186) Methylobacterium extorquens PA1 5834254 YP_001642314.1 CDS Mext_4875 NC_010172.1 5447189 5449087 R KEGG: bra:BRADO2089 putative sensor histidine kinase with multiple PAS domains; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; MHYT domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; PAS sensor protein complement(5447189..5449087) Methylobacterium extorquens PA1 5833374 YP_001642315.1 CDS Mext_4876 NC_010172.1 5449360 5450313 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bra:BRADO3435 putative transcriptional regulatory protein, Crp/Fnr family; cyclic nucleotide-binding protein 5449360..5450313 Methylobacterium extorquens PA1 5833375 YP_001642316.1 CDS Mext_4877 NC_010172.1 5450363 5452294 R KEGG: bbt:BBta_2788 two component transcriptional regulatory protein, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; response regulator receiver; GAF domain protein; Sigma-70 region 4 type 2; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS sensor protein complement(5450363..5452294) Methylobacterium extorquens PA1 5833376 YP_001642317.1 CDS Mext_4878 NC_010172.1 5453762 5454229 D PFAM: PAS fold-3 domain protein; KEGG: ccr:CC_0836 sensor histidine kinase, putative; PAS domain-containing protein 5453762..5454229 Methylobacterium extorquens PA1 5833377 YP_001642318.1 CDS Mext_4879 NC_010172.1 5454814 5454996 D hypothetical protein 5454814..5454996 Methylobacterium extorquens PA1 5833378 YP_001642319.1 CDS Mext_4880 NC_010172.1 5455026 5455562 D hypothetical protein 5455026..5455562 Methylobacterium extorquens PA1 5833379 YP_001642320.1 CDS Mext_4881 NC_010172.1 5456071 5456526 R hypothetical protein complement(5456071..5456526) Methylobacterium extorquens PA1 5833380 YP_001642321.1 CDS Mext_4882 NC_010172.1 5456666 5456863 R hypothetical protein complement(5456666..5456863) Methylobacterium extorquens PA1 5833721 YP_001642322.1 CDS Mext_4883 NC_010172.1 5457572 5458738 D PFAM: DNA polymerase beta domain protein region; DNA polymerase subunit beta 5457572..5458738 Methylobacterium extorquens PA1 5833722 YP_001642323.1 CDS Mext_4884 NC_010172.1 5458846 5459391 D hypothetical protein 5458846..5459391 Methylobacterium extorquens PA1 5833723 YP_001642324.1 CDS Mext_4885 NC_010172.1 5459559 5460122 D PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: mlo:mlr9024 resolvase / integrase; resolvase domain-containing protein 5459559..5460122 Methylobacterium extorquens PA1 5833724 YP_001642325.1 CDS Mext_4886 NC_010172.1 5460347 5462539 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: psb:Psyr_3124 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(5460347..5462539) Methylobacterium extorquens PA1 5833725 YP_001642326.1 CDS Mext_4887 NC_010172.1 5463619 5465145 D PFAM: Dual specificity protein phosphatase; ADP-ribosylation/Crystallin J1; SMART: Protein-tyrosine phosphatase, catalytic; KEGG: nar:Saro_0259 ADP-ribosyl-(dinitrogen reductase) hydrolase; ADP-ribosylation/crystallin J1 5463619..5465145 Methylobacterium extorquens PA1 5833726 YP_001642327.1 CDS Mext_4888 NC_010172.1 5465724 5467817 R TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: cth:Cthe_1986 phage / plasmid primase, P4 family; P4 family phage/plasmid primase complement(5465724..5467817) Methylobacterium extorquens PA1 5833727 YP_001642328.1 CDS Mext_4889 NC_010172.1 5468358 5469683 R PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: ret:RHE_CH00241 putative recombinase protein, phage integrase family; integrase family protein complement(5468358..5469683) Methylobacterium extorquens PA1 5832508 YP_001642329.1 CDS rpsT NC_010172.1 5470121 5470387 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 5470121..5470387 Methylobacterium extorquens PA1 5832510 Mext_R0001 tRNA Mext_R0001 NC_010172.1 78345 78421 D tRNA-Met 78345..78421 Methylobacterium extorquens PA1 5835347 Mext_R0002 tRNA Mext_R0002 NC_010172.1 189929 190005 R tRNA-Met complement(189929..190005) Methylobacterium extorquens PA1 5832006 Mext_R0003 tRNA Mext_R0003 NC_010172.1 198806 198880 D tRNA-Glu 198806..198880 Methylobacterium extorquens PA1 5833117 Mext_R0004 tRNA Mext_R0004 NC_010172.1 308305 308394 R tRNA-Ser complement(308305..308394) Methylobacterium extorquens PA1 5832436 Mext_R0005 tRNA Mext_R0005 NC_010172.1 319505 319579 R tRNA-Val complement(319505..319579) Methylobacterium extorquens PA1 5831949 Mext_R0006 tRNA Mext_R0006 NC_010172.1 394598 394690 D tRNA-Ser 394598..394690 Methylobacterium extorquens PA1 5832661 Mext_R0007 tRNA Mext_R0007 NC_010172.1 625034 625107 R tRNA-Gly complement(625034..625107) Methylobacterium extorquens PA1 5834459 Mext_R0008 tRNA Mext_R0008 NC_010172.1 640726 640802 R tRNA-Met complement(640726..640802) Methylobacterium extorquens PA1 5834290 Mext_R0011 tRNA Mext_R0011 NC_010172.1 644271 644346 R tRNA-Ala complement(644271..644346) Methylobacterium extorquens PA1 5833880 Mext_R0012 tRNA Mext_R0012 NC_010172.1 644353 644429 R tRNA-Ile complement(644353..644429) Methylobacterium extorquens PA1 5833881 Mext_R0014 tRNA Mext_R0014 NC_010172.1 788334 788418 R tRNA-Leu complement(788334..788418) Methylobacterium extorquens PA1 5834183 Mext_R0015 tRNA Mext_R0015 NC_010172.1 803043 803132 D tRNA-Ser 803043..803132 Methylobacterium extorquens PA1 5833982 Mext_R0016 tRNA Mext_R0016 NC_010172.1 877071 877147 R tRNA-Met complement(877071..877147) Methylobacterium extorquens PA1 5831568 Mext_R0019 tRNA Mext_R0019 NC_010172.1 880616 880691 R tRNA-Ala complement(880616..880691) Methylobacterium extorquens PA1 5833082 Mext_R0020 tRNA Mext_R0020 NC_010172.1 880698 880774 R tRNA-Ile complement(880698..880774) Methylobacterium extorquens PA1 5833083 Mext_R0022 tRNA Mext_R0022 NC_010172.1 1084784 1084859 D tRNA-Glu 1084784..1084859 Methylobacterium extorquens PA1 5833662 Mext_R0023 tRNA Mext_R0023 NC_010172.1 1086697 1086773 R tRNA-Met complement(1086697..1086773) Methylobacterium extorquens PA1 5833783 Mext_R0026 tRNA Mext_R0026 NC_010172.1 1090242 1090317 R tRNA-Ala complement(1090242..1090317) Methylobacterium extorquens PA1 5830962 Mext_R0027 tRNA Mext_R0027 NC_010172.1 1090324 1090400 R tRNA-Ile complement(1090324..1090400) Methylobacterium extorquens PA1 5830963 Mext_R0029 tRNA Mext_R0029 NC_010172.1 1109038 1109114 R tRNA-Met complement(1109038..1109114) Methylobacterium extorquens PA1 5833234 Mext_R0032 tRNA Mext_R0032 NC_010172.1 1112583 1112658 R tRNA-Ala complement(1112583..1112658) Methylobacterium extorquens PA1 5833325 Mext_R0033 tRNA Mext_R0033 NC_010172.1 1112665 1112741 R tRNA-Ile complement(1112665..1112741) Methylobacterium extorquens PA1 5833397 Mext_R0035 tRNA Mext_R0035 NC_010172.1 1183808 1183884 D tRNA-Asp 1183808..1183884 Methylobacterium extorquens PA1 5832402 Mext_R0036 tRNA Mext_R0036 NC_010172.1 1458282 1458358 R tRNA-Arg complement(1458282..1458358) Methylobacterium extorquens PA1 5835261 Mext_R0037 tRNA Mext_R0037 NC_010172.1 1530023 1530099 R tRNA-Met complement(1530023..1530099) Methylobacterium extorquens PA1 5831231 Mext_R0040 tRNA Mext_R0040 NC_010172.1 1533568 1533643 R tRNA-Ala complement(1533568..1533643) Methylobacterium extorquens PA1 5833304 Mext_R0041 tRNA Mext_R0041 NC_010172.1 1533650 1533726 R tRNA-Ile complement(1533650..1533726) Methylobacterium extorquens PA1 5833305 Mext_R0043 tRNA Mext_R0043 NC_010172.1 1536803 1536879 D tRNA-Arg 1536803..1536879 Methylobacterium extorquens PA1 5832901 Mext_R0044 tRNA Mext_R0044 NC_010172.1 1857030 1857104 D tRNA-Gly 1857030..1857104 Methylobacterium extorquens PA1 5831748 Mext_R0046 tRNA Mext_R0046 NC_010172.1 2181521 2181595 D tRNA-Val 2181521..2181595 Methylobacterium extorquens PA1 5832024 Mext_R0047 tRNA Mext_R0047 NC_010172.1 2388918 2388993 D tRNA-Thr 2388918..2388993 Methylobacterium extorquens PA1 5833766 Mext_R0048 tRNA Mext_R0048 NC_010172.1 2447917 2448003 R tRNA-Leu complement(2447917..2448003) Methylobacterium extorquens PA1 5834611 Mext_R0049 tRNA Mext_R0049 NC_010172.1 2719525 2719609 D tRNA-Leu 2719525..2719609 Methylobacterium extorquens PA1 5834146 Mext_R0050 tRNA Mext_R0050 NC_010172.1 2726285 2726360 D tRNA-Val 2726285..2726360 Methylobacterium extorquens PA1 5834616 Mext_R0051 tRNA Mext_R0051 NC_010172.1 2768158 2768233 D tRNA-Ala 2768158..2768233 Methylobacterium extorquens PA1 5835627 Mext_R0052 tRNA Mext_R0052 NC_010172.1 2942563 2942638 R tRNA-Phe complement(2942563..2942638) Methylobacterium extorquens PA1 5831222 Mext_R0053 tRNA Mext_R0053 NC_010172.1 2943784 2943859 D tRNA-Thr 2943784..2943859 Methylobacterium extorquens PA1 5832880 Mext_R0054 tRNA Mext_R0054 NC_010172.1 3095805 3095886 D tRNA-Tyr 3095805..3095886 Methylobacterium extorquens PA1 5832740 Mext_R0055 tRNA Mext_R0055 NC_010172.1 3117616 3117692 R tRNA-His complement(3117616..3117692) Methylobacterium extorquens PA1 5830974 Mext_R0056 tRNA Mext_R0056 NC_010172.1 3419746 3419821 D tRNA-Lys 3419746..3419821 Methylobacterium extorquens PA1 5835460 Mext_R0057 tRNA Mext_R0057 NC_010172.1 3485095 3485171 D tRNA-Pro 3485095..3485171 Methylobacterium extorquens PA1 5834528 Mext_R0058 tRNA Mext_R0058 NC_010172.1 3856566 3856640 D tRNA-Gly 3856566..3856640 Methylobacterium extorquens PA1 5834381 Mext_R0059 tRNA Mext_R0059 NC_010172.1 3965392 3965467 R tRNA-Met complement(3965392..3965467) Methylobacterium extorquens PA1 5833510 Mext_R0060 tRNA Mext_R0060 NC_010172.1 4068098 4068187 D tRNA-Ser 4068098..4068187 Methylobacterium extorquens PA1 5833132 Mext_R0061 tRNA Mext_R0061 NC_010172.1 4194374 4194449 D tRNA-Ala 4194374..4194449 Methylobacterium extorquens PA1 5834160 Mext_R0062 tRNA Mext_R0062 NC_010172.1 4208419 4208494 D tRNA-Ala 4208419..4208494 Methylobacterium extorquens PA1 5835266 Mext_R0063 tRNA Mext_R0063 NC_010172.1 4310427 4310503 D tRNA-Pro 4310427..4310503 Methylobacterium extorquens PA1 5832294 Mext_R0064 tRNA Mext_R0064 NC_010172.1 4310549 4310625 D tRNA-Arg 4310549..4310625 Methylobacterium extorquens PA1 5832191 Mext_R0065 tRNA Mext_R0065 NC_010172.1 4436594 4436670 D tRNA-Trp 4436594..4436670 Methylobacterium extorquens PA1 5835666 Mext_R0066 tRNA Mext_R0066 NC_010172.1 4685457 4685541 R tRNA-Leu complement(4685457..4685541) Methylobacterium extorquens PA1 5831922 Mext_R0067 tRNA Mext_R0067 NC_010172.1 4837976 4838049 D tRNA-Gln 4837976..4838049 Methylobacterium extorquens PA1 5833005 Mext_R0068 tRNA Mext_R0068 NC_010172.1 4845357 4845441 D tRNA-Leu 4845357..4845441 Methylobacterium extorquens PA1 5831575 Mext_R0069 tRNA Mext_R0069 NC_010172.1 4868791 4868865 D tRNA-Gln 4868791..4868865 Methylobacterium extorquens PA1 5835031 Mext_R0070 tRNA Mext_R0070 NC_010172.1 5040705 5040781 D tRNA-Pro 5040705..5040781 Methylobacterium extorquens PA1 5834445 Mext_R0072 tRNA Mext_R0072 NC_010172.1 5255142 5255215 R tRNA-Cys complement(5255142..5255215) Methylobacterium extorquens PA1 5831850 Mext_R0073 tRNA Mext_R0073 NC_010172.1 5255459 5255534 D tRNA-Asn 5255459..5255534 Methylobacterium extorquens PA1 5831851 Mext_R0074 tRNA Mext_R0074 NC_010172.1 5417697 5417772 D tRNA-Lys 5417697..5417772 Methylobacterium extorquens PA1 5835333 Mext_R0075 tRNA Mext_R0075 NC_010172.1 5469764 5469838 R tRNA-Thr complement(5469764..5469838) Methylobacterium extorquens PA1 5832509 Mext_R0009 rRNA Mext_R0009 NC_010172.1 640883 640997 R 5S ribosomal RNA complement(640883..640997) Methylobacterium extorquens PA1 5834291 Mext_R0010 rRNA Mext_R0010 NC_010172.1 641134 643958 R 23S ribosomal RNA complement(641134..643958) Methylobacterium extorquens PA1 5834292 Mext_R0013 rRNA Mext_R0013 NC_010172.1 644635 646112 R 16S ribosomal RNA complement(644635..646112) Methylobacterium extorquens PA1 5835760 Mext_R0017 rRNA Mext_R0017 NC_010172.1 877228 877342 R 5S ribosomal RNA complement(877228..877342) Methylobacterium extorquens PA1 5831569 Mext_R0018 rRNA Mext_R0018 NC_010172.1 877479 880303 R 23S ribosomal RNA complement(877479..880303) Methylobacterium extorquens PA1 5833081 Mext_R0021 rRNA Mext_R0021 NC_010172.1 880980 882457 R 16S ribosomal RNA complement(880980..882457) Methylobacterium extorquens PA1 5832874 Mext_R0024 rRNA Mext_R0024 NC_010172.1 1086854 1086968 R 5S ribosomal RNA complement(1086854..1086968) Methylobacterium extorquens PA1 5834128 Mext_R0025 rRNA Mext_R0025 NC_010172.1 1087105 1089929 R 23S ribosomal RNA complement(1087105..1089929) Methylobacterium extorquens PA1 5834129 Mext_R0028 rRNA Mext_R0028 NC_010172.1 1090606 1092083 R 16S ribosomal RNA complement(1090606..1092083) Methylobacterium extorquens PA1 5833128 Mext_R0030 rRNA Mext_R0030 NC_010172.1 1109195 1109309 R 5S ribosomal RNA complement(1109195..1109309) Methylobacterium extorquens PA1 5833235 Mext_R0031 rRNA Mext_R0031 NC_010172.1 1109446 1112270 R 23S ribosomal RNA complement(1109446..1112270) Methylobacterium extorquens PA1 5833324 Mext_R0034 rRNA Mext_R0034 NC_010172.1 1112947 1114424 R 16S ribosomal RNA complement(1112947..1114424) Methylobacterium extorquens PA1 5831515 Mext_R0038 rRNA Mext_R0038 NC_010172.1 1530180 1530294 R 5S ribosomal RNA complement(1530180..1530294) Methylobacterium extorquens PA1 5833186 Mext_R0039 rRNA Mext_R0039 NC_010172.1 1530431 1533255 R 23S ribosomal RNA complement(1530431..1533255) Methylobacterium extorquens PA1 5833187 Mext_R0042 rRNA Mext_R0042 NC_010172.1 1533932 1535409 R 16S ribosomal RNA complement(1533932..1535409) Methylobacterium extorquens PA1 5832712