-- dump date 20140619_144656 -- class Genbank::CDS -- table cds_note -- id note YP_001922732.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_001922733.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. YP_001922734.1 binds the polymerase to DNA and acts as a sliding clamp YP_001922735.1 KEGG: mex:Mext_0003 DNA replication and repair protein RecF; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; SMART: AAA ATPase YP_001922736.1 PFAM: lysine exporter; KEGG: mes:Meso_3363 lysine exporter protein (LysE/YggA) YP_001922737.1 KEGG: mex:Mext_0006 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases YP_001922738.1 KEGG: mex:Mext_0008 hypothetical protein YP_001922739.1 KEGG: mex:Mext_0009 helicase, RecD/TraA family; TIGRFAM: helicase, RecD/TraA family; SMART: Helix-hairpin-helix DNA-binding class 1; AAA ATPase YP_001922740.1 KEGG: mex:Mext_0010 hypothetical protein YP_001922741.1 KEGG: mex:Mext_0011 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_001922742.1 PFAM: BolA family protein; KEGG: mex:Mext_0012 BolA family protein YP_001922743.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: mex:Mext_0013 glutaredoxin-like protein YP_001922744.1 PFAM: glucose-inhibited division protein A; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_0014 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001922745.1 PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: mex:Mext_0015 SMP-30/gluconolaconase/LRE domain protein YP_001922746.1 KEGG: mex:Mext_0016 hypothetical protein YP_001922747.1 KEGG: mex:Mext_0017 hypothetical protein YP_001922748.1 KEGG: mex:Mext_0215 chaperone protein HtpG YP_001922749.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mex:Mext_0216 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_001922750.1 PFAM: polysulphide reductase NrfD; KEGG: mex:Mext_0217 polysulphide reductase NrfD YP_001922751.1 KEGG: mex:Mext_0218 hypothetical protein YP_001922752.1 KEGG: mex:Mext_0219 hypothetical protein YP_001922753.1 KEGG: mex:Mext_0220 hypothetical protein YP_001922754.1 KEGG: mex:Mext_0221 hypothetical protein YP_001922755.1 TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: mex:Mext_0222 cytochrome c oxidase, subunit II YP_001922756.1 KEGG: mex:Mext_0223 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_001922757.1 PFAM: cytochrome c oxidase subunit III; KEGG: mex:Mext_0224 cytochrome c oxidase subunit III YP_001922758.1 TIGRFAM: caa(3)-type oxidase, subunit IV; KEGG: mex:Mext_0225 caa(3)-type oxidase, subunit IV YP_001922759.1 KEGG: bur:Bcep18194_B2589 hypothetical protein YP_001922760.1 PFAM: lytic transglycosylase; KEGG: rpa:RPA1087 possible transglycosylase SLT domain YP_001922761.1 PFAM: Curli production assembly/transport component CsgG; KEGG: rpd:RPD_2732 curli production assembly/transport component CsgG precursor YP_001922762.1 KEGG: rpd:RPD_2731 hypothetical protein YP_001922763.1 KEGG: rpd:RPD_2728 curlin associated YP_001922764.1 KEGG: rpd:RPD_2729 hypothetical protein YP_001922765.1 KEGG: slo:Shew_0376 curlin associated repeat protein YP_001922766.1 SMART: regulatory protein LuxR; KEGG: msm:MSMEG_6568 regulatory protein, LuxR YP_001922767.1 KEGG: rpd:RPD_2726 hypothetical protein YP_001922768.1 KEGG: rpd:RPD_2734 hypothetical protein YP_001922769.1 KEGG: mex:Mext_0018 ATP-binding region ATPase domain protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; SMART: PAC repeat-containing protein YP_001922770.1 KEGG: mex:Mext_0019 non-specific serine/threonine protein kinase; PFAM: Circadian clock protein KaiC central region; KaiA binding; SMART: AAA ATPase YP_001922771.1 KEGG: mex:Mext_4051 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001922772.1 KEGG: mex:Mext_0020 hypothetical protein YP_001922773.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_0021 short-chain dehydrogenase/reductase SDR YP_001922774.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_0022 GntR domain protein YP_001922775.1 TIGRFAM: malonate transporter, MadM subunit; PFAM: malonate/sodium symporter MadM subunit; KEGG: swi:Swit_4284 malonate/sodium symporter MadM subunit YP_001922776.1 TIGRFAM: malonate transporter, MadL subunit; PFAM: malonate transporter MadL subunit; KEGG: bja:blr1277 malonate carrier protein YP_001922777.1 TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: mex:Mext_0024 malonate decarboxylase, alpha subunit YP_001922778.1 acyl carrier protein of malonate decarboxylase YP_001922779.1 The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A YP_001922780.1 TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: mex:Mext_0027 malonate decarboxylase, gamma subunit YP_001922781.1 KEGG: mex:Mext_0028 hypothetical protein YP_001922782.1 KEGG: mex:Mext_0029 triphosphoribosyl-dephospho-CoA synthase MdcB; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; PFAM: triphosphoribosyl-dephospho-CoA protein YP_001922783.1 KEGG: mex:Mext_0030 acyl transferase domain protein YP_001922784.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rpd:RPD_0914 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_001922785.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: azc:AZC_0074 transcriptional regulator YP_001922786.1 KEGG: bvi:Bcep1808_6051 hypothetical protein YP_001922787.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: azc:AZC_0072 amidohydrolase YP_001922788.1 PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rle:RL0659 hypothetical protein YP_001922789.1 PFAM: GCN5-related N-acetyltransferase; KEGG: azc:AZC_0070 histone acetyltransferase YP_001922790.1 PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: mpt:Mpe_A3475 hypothetical protein YP_001922791.1 KEGG: azc:AZC_0068 glycosyltransferase YP_001922792.1 PFAM: glycosyl transferase group 1; KEGG: azc:AZC_0068 glycosyltransferase YP_001922793.1 KEGG: mpt:Mpe_A3473 hypothetical protein YP_001922794.1 PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: azc:AZC_0066 flavoprotein involved in K+ transport YP_001922795.1 KEGG: mex:Mext_3808 hypothetical protein YP_001922796.1 KEGG: mex:Mext_3807 hypothetical protein YP_001922797.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_1681 glyoxalase/bleomycin resistance protein/dioxygenase YP_001922798.1 PFAM: integrase family protein; KEGG: rpd:RPD_2182 hypothetical protein YP_001922799.1 KEGG: mex:Mext_3216 metallophosphoesterase YP_001922800.1 PFAM: integrase catalytic region; KEGG: bja:bll8200 transposase YP_001922801.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bja:bll8199 transposase YP_001922803.1 KEGG: nve:NEMVE_v1g238655 predicted protein Pfam: ShK Toxin_1 Extensin_2 PROSITE: ALA_RICH PRO_RICH YP_001922804.1 KEGG: aav:Aave_1641 hypothetical protein YP_001922808.1 KEGG: rha:RHA1_ro06644 translation initiation factor IF-2 YP_001922809.1 PFAM: HIRAN; KEGG: dar:Daro_0502 hypothetical protein YP_001922812.1 KEGG: rsh:Rsph17029_3954 hypothetical protein YP_001922813.1 KEGG: lxx:Lxx18100 siderophore-interacting protein YP_001922814.1 KEGG: gur:Gura_0816 efflux transporter, RND family, MFP subunit YP_001922816.1 KEGG: nar:Saro_2490 translation initiation factor IF-2 YP_001922817.1 SMART: TIR protein; KEGG: mex:Mext_1920 TIR protein YP_001922818.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rme:Rmet_3745 diguanylate cyclase (GGDEF domain) YP_001922820.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: ppu:PP_3651 sensor histidine kinase/response regulator YP_001922822.1 KEGG: mex:Mext_3897 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001922823.1 PFAM: response regulator receiver; KEGG: mex:Mext_4112 response regulator receiver YP_001922824.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: mex:Mext_1889 ATP-binding region ATPase domain protein YP_001922825.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_4051 PAS sensor protein YP_001922826.1 KEGG: mex:Mext_1455 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001922827.1 PFAM: protein of unknown function UPF0156; KEGG: plu:plu4784 hypothetical protein YP_001922828.1 KEGG: xcv:XCVd0139 hypothetical protein YP_001922829.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2424 transposase, IS4 YP_001922832.1 KEGG: sco:SCO7203 integral hypothetical protein YP_001922833.1 PFAM: glutaredoxin; KEGG: sme:SMa0280 hypothetical protein YP_001922834.1 KEGG: rle:pRL110328 hypothetical protein YP_001922835.1 PFAM: protein of unknown function DUF305; KEGG: mex:Mext_2829 protein of unknown function DUF305 YP_001922836.1 KEGG: mex:Mext_2830 hypothetical protein YP_001922837.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_2831 acriflavin resistance protein YP_001922838.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: mex:Mext_2832 efflux transporter, RND family, MFP subunit YP_001922839.1 KEGG: mex:Mext_2833 conserved hypothetical protein; esterase/lipase/thioesterase domains YP_001922840.1 PFAM: Heavy metal transport/detoxification protein; KEGG: bur:Bcep18194_A6338 heavy metal transport/detoxification protein YP_001922841.1 PFAM: Rhodanese domain protein; KEGG: xau:Xaut_2891 rhodanese domain protein YP_001922842.1 PFAM: beta-lactamase domain protein; KEGG: xau:Xaut_2892 beta-lactamase domain protein YP_001922843.1 PFAM: protein of unknown function DUF81; KEGG: xau:Xaut_2893 protein of unknown function DUF81 YP_001922844.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mex:Mext_1142 protein of unknown function DUF395 YeeE/YedE YP_001922845.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mex:Mext_1143 protein of unknown function DUF395 YeeE/YedE YP_001922846.1 KEGG: sme:SMa1058 hypothetical protein YP_001922847.1 PFAM: Domain of unknown function DUF1791; KEGG: dsh:Dshi_1398 domain of unknown function DUF1791 YP_001922848.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_4909 ErfK/YbiS/YcfS/YnhG YP_001922849.1 PFAM: DSBA oxidoreductase; KEGG: rpc:RPC_4908 DsbA oxidoreductase YP_001922850.1 PFAM: cytochrome c biogenesis protein transmembrane region; thioredoxin; KEGG: rpb:RPB_4360 thiol:disulfide interchange protein YP_001922851.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_4906 transcriptional regulator YP_001922852.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rpd:RPD_4242 ATP-binding region, ATPase-like YP_001922853.1 KEGG: acr:Acry_2252 polyhydroxyalkonate synthesis repressor, PhaR YP_001922854.1 KEGG: gbe:GbCGDNIH1_1407 hypothetical protein YP_001922856.1 KEGG: rpd:RPD_3531 PilT protein-like YP_001922858.1 KEGG: rpb:RPB_3478 ISSpo8, transposase YP_001922859.1 PFAM: regulatory protein ArsR; transcriptional regulator TrmB; KEGG: mex:Mext_1145 regulatory protein ArsR YP_001922860.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_0073 cyclic nucleotide-binding YP_001922861.1 KEGG: mex:Mext_0018 ATP-binding region ATPase domain protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; SMART: PAC repeat-containing protein YP_001922862.1 KEGG: mex:Mext_0019 non-specific serine/threonine protein kinase; PFAM: Circadian clock protein KaiC central region; KaiA binding; SMART: AAA ATPase YP_001922863.1 KEGG: mes:Meso_2422 hypothetical protein YP_001922864.1 PFAM: cytochrome B561; KEGG: bov:BOV_A0183 cytochrome b561 YP_001922865.1 PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3848 acyl-CoA dehydrogenase type 2 domain YP_001922866.1 PFAM: protein of unknown function DUF892; KEGG: mex:Mext_2776 protein of unknown function DUF892 YP_001922868.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: mlo:mlr3504 hypothetical protein YP_001922869.1 KEGG: fra:Francci3_0544 NADH dehydrogenase subunit G YP_001922870.1 PFAM: chemotaxis sensory transducer; type IV pilus assembly PilZ; KEGG: bra:BRADO0758 hypothetical protein; methyl-accepting chemotaxis protein (fragment) YP_001922871.1 KEGG: mex:Mext_4051 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001922872.1 PFAM: ribonuclease BN; KEGG: mex:Mext_2469 ribonuclease BN YP_001922873.1 KEGG: mex:Mext_1455 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001922874.1 KEGG: rpe:RPE_4863 PAS/PAC sensor hybrid histidine kinase YP_001922875.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_3898 multi-sensor signal transduction histidine kinase YP_001922876.1 KEGG: mex:Mext_0802 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001922877.1 KEGG: mex:Mext_4051 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001922878.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; KEGG: pol:Bpro_3898 multi-sensor signal transduction histidine kinase YP_001922881.1 KEGG: mex:Mext_0981 hypothetical protein YP_001922882.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: mex:Mext_2531 deoxyribodipyrimidine photo-lyase YP_001922883.1 KEGG: mex:Mext_0020 hypothetical protein YP_001922884.1 PFAM: transposase mutator type; KEGG: swi:Swit_4911 transposase, mutator type YP_001922885.1 PFAM: Patatin; KEGG: mex:Mext_4578 patatin YP_001922886.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: gox:GOX2676 alcohol/aldehyde dehydrogenase YP_001922887.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_0021 short-chain dehydrogenase/reductase SDR YP_001922888.1 PFAM: Protein of unknown function YqcI/YcgG; KEGG: mex:Mext_2464 protein of unknown function YqcI/YcgG YP_001922889.1 PFAM: glutamine amidotransferase class-I; KEGG: bra:BRADO0854 glutamine amidotransferase, class-I YP_001922891.1 KEGG: mex:Mext_1888 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001922892.1 KEGG: mex:Mext_1886 hypothetical protein YP_001922893.1 KEGG: mex:Mext_4369 hypothetical protein YP_001922894.1 PFAM: protein of unknown function DUF892; KEGG: mex:Mext_1129 protein of unknown function DUF892 YP_001922895.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; PAS fold-4 domain protein; KEGG: mex:Mext_1889 ATP-binding region ATPase domain protein YP_001922896.1 KEGG: mex:Mext_1881 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001922897.1 PFAM: protein of unknown function UPF0074; regulatory protein Crp; KEGG: mex:Mext_1880 regulatory protein Crp YP_001922898.1 KEGG: mex:Mext_1879 hypothetical protein YP_001922899.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_2492 diguanylate cyclase YP_001922900.1 KEGG: mex:Mext_1186 conserved hypothetical protein; signal peptide YP_001922902.1 KEGG: rpa:RPA3317 hypothetical protein YP_001922903.1 PFAM: K potassium transporter; KEGG: mex:Mext_1122 K potassium transporter YP_001922904.1 PFAM: protein of unknown function DUF937; KEGG: mex:Mext_1884 protein of unknown function DUF937 YP_001922905.1 KEGG: aav:Aave_1641 hypothetical protein YP_001922907.1 PFAM: metallophosphoesterase; KEGG: nha:Nham_3779 metallophosphoesterase YP_001922909.1 KEGG: nha:Nham_1357 hypothetical protein YP_001922910.1 KEGG: mex:Mext_0768 transposase YP_001922911.1 PFAM: ATPase AAA; ATPase activities AAA_5; SMART: AAA ATPase; KEGG: bja:blr7723 hypothetical protein YP_001922913.1 KEGG: nha:Nham_0784 hypothetical protein YP_001922914.1 KEGG: nha:Nham_0785 hypothetical protein YP_001922915.1 KEGG: nha:Nham_0786 hypothetical protein YP_001922920.1 KEGG: cau:Caur_2432 protein of unknown function DUF820 YP_001922924.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_001922925.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: mex:Mext_0177 phosphoribosylanthranilate isomerase YP_001922926.1 KEGG: mex:Mext_0178 hypothetical protein YP_001922927.1 TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: mex:Mext_0179 integration host factor, beta subunit YP_001922928.1 TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: mex:Mext_0180 signal peptide peptidase SppA, 36K type YP_001922929.1 KEGG: mex:Mext_0181 hypothetical protein YP_001922930.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_001922931.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: mex:Mext_0183 RNA methyltransferase, TrmH family, group 3 YP_001922932.1 PFAM: resolvase; KEGG: mex:Mext_3478 resolvase domain YP_001922933.1 PFAM: regulatory protein LysR; KEGG: mex:Mext_3479 regulatory protein LysR YP_001922934.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: mex:Mext_0187 cytochrome c biogenesis protein transmembrane region YP_001922935.1 KEGG: bja:blr3188 hypothetical protein YP_001922936.1 PFAM: conserved hypothetical protein; KEGG: bja:blr3189 hypothetical protein YP_001922937.1 KEGG: sme:SMc02614 hypothetical protein YP_001922938.1 KEGG: sme:SMc02615 hypothetical signal peptide protein YP_001922939.1 PFAM: amino acid permease-associated region; KEGG: sme:SMc02616 permease transhypothetical protein YP_001922941.1 KEGG: mlo:mll7317 hypothetical protein YP_001922942.1 KEGG: smd:Smed_3300 hypothetical protein YP_001922943.1 SMART: HhH-GPD family protein; KEGG: mex:Mext_0188 HhH-GPD family protein YP_001922944.1 KEGG: mex:Mext_0189 hypothetical protein YP_001922945.1 KEGG: mex:Mext_0190 hypothetical protein YP_001922946.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0191 chemotaxis sensory transducer YP_001922947.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_0192 ABC transporter YP_001922948.1 KEGG: mex:Mext_0193 hypothetical protein YP_001922949.1 KEGG: mex:Mext_0194 hypothetical protein YP_001922950.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2631 TonB-dependent siderophore receptor YP_001922951.1 PFAM: PepSY-associated TM helix domain protein; KEGG: rpa:RPA0406 hypothetical protein YP_001922952.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc03196 molybdate-binding periplasmic ABC transporter protein YP_001922953.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bra:BRADO2464 transcriptional regulatory protein, LysR family YP_001922954.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr4132 hypothetical protein YP_001922956.1 KEGG: gfo:GFO_1672 conserved hypothetical protein, secreted YP_001922957.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: pae:PA1602 probable oxidoreductase YP_001922958.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: nha:Nham_1181 twin-arginine translocation pathway signal YP_001922959.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:blr3854 hypothetical protein YP_001922960.1 PFAM: protein of unknown function DUF1656; KEGG: rme:Rmet_4792 protein of unknown function DUF1656 YP_001922961.1 PFAM: fusaric acid resistance protein conserved region; KEGG: bra:BRADO4669 efflux transporter permease; fusaric acid resistance pump YP_001922962.1 PFAM: regulatory protein MarR; KEGG: bvi:Bcep1808_5466 transcriptional regulator, MarR family YP_001922964.1 KEGG: bth:BT_1400 hypothetical protein YP_001922965.1 KEGG: mex:Mext_0768 transposase YP_001922966.1 PFAM: tannase and feruloyl esterase; KEGG: msu:MS2241 hypothetical protein YP_001922967.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: mlo:mll2090 hypothetical protein YP_001922968.1 PFAM: glycosyl transferase family 2; KEGG: oan:Oant_0383 glycosyl transferase family 2 YP_001922969.1 KEGG: pla:Plav_2995 hypothetical protein YP_001922970.1 PFAM: polysaccharide deacetylase; KEGG: bja:bll1083 hypothetical protein YP_001922971.1 PFAM: glycoside hydrolase family 5; KEGG: mlo:mlr2086 cellulase YP_001922972.1 KEGG: bra:BRADO4998 conserved hypothetical protein; acyl-CoA N-acyltransferase YP_001922973.1 SMART: transcription factor jumonji jmjC domain protein; KEGG: nwi:Nwi_1272 transcription factor jumonji, JmjC YP_001922974.1 PFAM: polysaccharide biosynthesis protein; KEGG: dol:Dole_1796 polysaccharide biosynthesis protein YP_001922975.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMb21502 glycosyltransferase protein YP_001922976.1 PFAM: glycosyl transferase group 1; KEGG: mes:Meso_2877 glycosyl transferase, group 1 YP_001922977.1 PFAM: O-antigen polymerase; KEGG: mes:Meso_2875 O-antigen polymerase YP_001922978.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_2089 LysR substrate-binding YP_001922979.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_2090 short-chain dehydrogenase/reductase SDR YP_001922980.1 PFAM: transketolase; KEGG: mex:Mext_2091 transketolase domain protein YP_001922981.1 PFAM: transketolase; transketolase; KEGG: mex:Mext_2092 transketolase central region YP_001922982.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: mex:Mext_2093 TRAP dicarboxylate transporter, DctP subunit YP_001922983.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: mex:Mext_2094 TRAP C4-dicarboxylate transport system permease DctM subunit YP_001922984.1 PFAM: porin; KEGG: mex:Mext_3186 porin YP_001922985.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_3514 alcohol dehydrogenase zinc-binding domain protein YP_001922986.1 PFAM: transposase mutator type; KEGG: swi:Swit_4911 transposase, mutator type YP_001922988.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_1159 RNA polymerase sigma factor, sigma-70 family YP_001922989.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_1160 helix-turn-helix domain protein YP_001922990.1 KEGG: mex:Mext_1161 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter; SMART: AAA ATPase YP_001922991.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_1162 type I secretion membrane fusion protein, HlyD family YP_001922992.1 KEGG: mex:Mext_1163 hypothetical protein YP_001922993.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1164 cellulose synthase (UDP-forming) YP_001922994.1 KEGG: mex:Mext_1165 hypothetical protein YP_001922995.1 KEGG: mex:Mext_1166 hypothetical protein YP_001922996.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1558 major facilitator superfamily MFS_1 YP_001922997.1 KEGG: mex:Mext_0860 short-chain dehydrogenase/reductase SDR YP_001922998.1 KEGG: mex:Mext_1324 hypothetical protein YP_001922999.1 KEGG: mex:Mext_0195 hypothetical protein YP_001923000.1 KEGG: mex:Mext_0196 hypothetical protein YP_001923001.1 KEGG: mex:Mext_0197 hypothetical protein YP_001923002.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_0198 glycosyl transferase group 1 YP_001923003.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_0199 glycosyl transferase group 1 YP_001923004.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: glycosyl transferase group 1; sucrose-6F-phosphate phosphohydrolase; haloacid dehalogenase type 3; KEGG: mex:Mext_0200 HAD-superfamily hydrolase, subfamily IIB YP_001923005.1 KEGG: mex:Mext_0201 sugar transferase YP_001923006.1 KEGG: mex:Mext_0202 hypothetical protein YP_001923007.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0203 glycosyl transferase family 2 YP_001923008.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_0204 glycosyl transferase group 1 YP_001923009.1 KEGG: mex:Mext_0205 hypothetical protein YP_001923010.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mex:Mext_4582 formate dehydrogenase, alpha subunit YP_001923011.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mex:Mext_4581 respiratory-chain NADH dehydrogenase domain 51 kDa subunit YP_001923012.1 KEGG: mex:Mext_4580 hypothetical protein YP_001923013.1 PFAM: cytochrome B561; KEGG: mex:Mext_0231 cytochrome b561 YP_001923014.1 PFAM: catalase domain protein; KEGG: mex:Mext_0230 catalase domain protein YP_001923015.1 KEGG: mex:Mext_0229 hypothetical protein YP_001923016.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_0228 RNA polymerase sigma factor, sigma-70 family YP_001923017.1 KEGG: mex:Mext_0227 hypothetical protein YP_001923018.1 KEGG: mex:Mext_1323 hypothetical protein YP_001923019.1 KEGG: mex:Mext_3619 hypothetical protein YP_001923020.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_3812 protein of unknown function UPF0118 YP_001923021.1 PFAM: protein of unknown function DUF937; KEGG: mex:Mext_1884 protein of unknown function DUF937 YP_001923022.1 KEGG: mex:Mext_2669 hypothetical protein YP_001923023.1 KEGG: mex:Mext_3617 hypothetical protein YP_001923024.1 PFAM: K potassium transporter; KEGG: mex:Mext_1122 K potassium transporter YP_001923025.1 TIGRFAM: PAS sensor protein; KEGG: gbe:GbCGDNIH1_1132 sensory transduction protein kinase YP_001923026.1 PFAM: CheB methylesterase; MCP methyltransferase CheR-type; HWE histidine kinase; PAS fold-4 domain protein; KEGG: gbe:GbCGDNIH1_1133 chemotaxis protein methyltransferase YP_001923027.1 KEGG: dge:Dgeo_1302 IS4 family transposase YP_001923028.1 PFAM: amine oxidase; KEGG: mex:Mext_4367 amine oxidase YP_001923029.1 PFAM: response regulator receiver; KEGG: mex:Mext_4051 PAS sensor protein YP_001923030.1 PFAM: response regulator receiver; KEGG: rpa:RPA4010 response regulator receiver (CheY-like protein) YP_001923031.1 KEGG: rpa:RPA4009 signal transduction histidine kinase with GAF domain; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001923032.1 PFAM: protein of unknown function DUF1486; KEGG: bra:BRADO4805 conserved hypothetical protein, NTF2-like superfamily protein YP_001923034.1 KEGG: rpd:RPD_3256 catalase YP_001923035.1 KEGG: mex:Mext_3086 catalase YP_001923036.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: rsq:Rsph17025_1953 intracellular protease, PfpI family YP_001923037.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1326 short-chain dehydrogenase/reductase SDR YP_001923038.1 binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage YP_001923040.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress YP_001923041.1 KEGG: mex:Mext_0768 transposase YP_001923043.1 KEGG: dra:DR_0186 exodeoxyribonuclease VII large subunit YP_001923044.1 KEGG: dge:Dgeo_0148 exodeoxyribonuclease VII large subunit YP_001923045.1 KEGG: pna:Pnap_4637 hypothetical protein YP_001923046.1 KEGG: rno:687563 similar to testis-specific protein TSP-NY isoform a YP_001923047.1 KEGG: pna:Pnap_4983 hypothetical protein YP_001923049.1 KEGG: pna:Pnap_4985 hypothetical protein YP_001923051.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: acr:Acry_0807 transposase IS116/IS110/IS902 family protein YP_001923052.1 KEGG: mex:Mext_3517 DNA-directed DNA polymerase YP_001923053.1 PFAM: peptidase S24 and S26 domain protein; KEGG: mex:Mext_0361 peptidase S24 and S26 domain protein YP_001923054.1 KEGG: mex:Mext_3520 hypothetical protein YP_001923055.1 PFAM: integrase family protein; KEGG: pla:Plav_0330 integrase family protein YP_001923056.1 PFAM: transposase mutator type; KEGG: swi:Swit_4911 transposase, mutator type YP_001923057.1 PFAM: integrase catalytic region; KEGG: azc:AZC_1931 transposase YP_001923058.1 PFAM: transposase IS3/IS911 family protein; KEGG: azc:AZC_3263 transposase YP_001923059.1 KEGG: mex:Mext_1667 ATP-binding region ATPase domain protein YP_001923060.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mex:Mext_1668 response regulator receiver YP_001923062.1 PFAM: integrase family protein; KEGG: rru:Rru_A3316 phage integrase YP_001923063.1 PFAM: magnesium chelatase ChlI subunit; ATPase AAA; ATPase activities AAA_5; SMART: AAA ATPase; KEGG: mex:Mext_0275 ATPase AAA YP_001923064.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: mex:Mext_0276 carboxypeptidase Taq YP_001923065.1 KEGG: mex:Mext_0277 molecular chaperone, HSP70 class YP_001923066.1 KEGG: xfa:XF0818 endo-1,4-beta-glucanase YP_001923067.1 KEGG: mex:Mext_0278 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase YP_001923068.1 KEGG: bte:BTH_II0256 serine/threonine protein kinase YP_001923069.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: mex:Mext_0280 HAD-superfamily hydrolase, subfamily IA, variant 1 YP_001923070.1 PFAM: ATP12 ATPase; KEGG: mex:Mext_0281 ATP12 ATPase YP_001923071.1 PFAM: carboxyl transferase; KEGG: mex:Mext_0282 carboxyl transferase YP_001923072.1 KEGG: mex:Mext_0283 hypothetical protein YP_001923073.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_0284 regulatory protein TetR YP_001923074.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_001923075.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_0286 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_001923076.1 KEGG: mex:Mext_0287 hypothetical protein YP_001923077.1 TIGRFAM: crotonyl-CoA reductase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_0288 crotonyl-CoA reductase YP_001923078.1 PFAM: catalase domain protein; KEGG: mex:Mext_0289 catalase YP_001923079.1 KEGG: mex:Mext_0290 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein YP_001923080.1 KEGG: mex:Mext_0291 hypothetical protein YP_001923081.1 PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: mex:Mext_0292 short-chain dehydrogenase/reductase SDR YP_001923082.1 SMART: regulatory protein ArsR; KEGG: mex:Mext_0293 regulatory protein ArsR YP_001923083.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001923084.1 KEGG: mex:Mext_0295 hypothetical protein YP_001923085.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D YP_001923086.1 PFAM: peptidase C15 pyroglutamyl peptidase I; KEGG: mex:Mext_0297 peptidase C15 pyroglutamyl peptidase I YP_001923087.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins YP_001923088.1 PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: mex:Mext_0299 protein of unknown function DUF900 hydrolase family protein YP_001923089.1 KEGG: mex:Mext_0300 hypothetical protein YP_001923090.1 PFAM: peptidase S15; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: mex:Mext_0301 peptidase S9 prolyl oligopeptidase active site domain protein YP_001923091.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_0302 ErfK/YbiS/YcfS/YnhG family protein YP_001923092.1 KEGG: mex:Mext_0303 hypothetical protein YP_001923093.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: mex:Mext_0304 nuclease SbcCD, D subunit YP_001923094.1 PFAM: SMC domain protein; KEGG: mex:Mext_0305 SMC domain protein YP_001923095.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_0306 major facilitator superfamily MFS_1 YP_001923096.1 KEGG: mex:Mext_0307 competence protein F YP_001923097.1 KEGG: mex:Mext_0308 hypothetical protein YP_001923098.1 PFAM: methyltransferase type 11; KEGG: mex:Mext_0309 methyltransferase type 11 YP_001923099.1 PFAM: protein of unknown function DUF427; KEGG: mex:Mext_0310 protein of unknown function DUF427 YP_001923100.1 KEGG: mex:Mext_0311 hypothetical protein YP_001923101.1 TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: mex:Mext_0312 mutator MutT protein YP_001923102.1 PFAM: protein of unknown function DUF541; KEGG: mex:Mext_0313 protein of unknown function DUF541 YP_001923103.1 KEGG: mex:Mext_0314 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ YP_001923104.1 KEGG: mex:Mext_0315 sensor histidine kinase with PAS/PAC and response regulator receiver domains YP_001923105.1 PFAM: glutathione peroxidase; KEGG: mex:Mext_0316 glutathione peroxidase YP_001923106.1 KEGG: mex:Mext_0317 hypothetical protein YP_001923107.1 KEGG: mex:Mext_0318 hypothetical protein YP_001923108.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain YP_001923109.1 KEGG: mex:Mext_0320 hypothetical protein YP_001923110.1 KEGG: mex:Mext_0321 hypothetical protein YP_001923111.1 PFAM: UvrD/REP helicase; KEGG: mex:Mext_0322 UvrD/REP helicase YP_001923112.1 PFAM: PhoH family protein; KEGG: mex:Mext_0323 PhoH family protein YP_001923113.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: mex:Mext_0324 MIP family channel protein YP_001923114.1 PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: mex:Mext_0325 exonuclease RNase T and DNA polymerase III YP_001923115.1 KEGG: bpu:BPUM_2904 hypothetical protein; TIGRFAM: bicupin, oxalate decarboxylase family; PFAM: Cupin domain protein; cupin YP_001923116.1 PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: mex:Mext_0326 (glutamate--ammonia-ligase) adenylyltransferase YP_001923118.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0328 ATP-binding region ATPase domain protein YP_001923119.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0329 response regulator receiver YP_001923120.1 PFAM: OsmC family protein; KEGG: mex:Mext_0330 OsmC family protein YP_001923121.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_0331 ABC transporter YP_001923122.1 PFAM: protein of unknown function DUF86; KEGG: rpc:RPC_1756 protein of unknown function DUF86 YP_001923123.1 PFAM: DNA polymerase beta domain protein region; KEGG: rpe:RPE_4868 DNA polymerase, beta domain protein region YP_001923124.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_0332 binding-protein-dependent transport systems inner membrane component YP_001923125.1 PFAM: lysine exporter; KEGG: mex:Mext_0333 lysine exporter protein (LysE/YggA) YP_001923126.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: mex:Mext_0334 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein YP_001923127.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein YP_001923128.1 PFAM: GrpE protein; KEGG: mex:Mext_0336 ribulose-phosphate 3-epimerase YP_001923129.1 KEGG: mex:Mext_0337 hypothetical protein YP_001923130.1 PFAM: protein of unknown function DUF497; KEGG: mex:Mext_0338 protein of unknown function DUF497 YP_001923131.1 PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: mex:Mext_0339 prephenate dehydratase YP_001923132.1 KEGG: mex:Mext_0340 3-deoxy-D-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase YP_001923133.1 PFAM: cytochrome c class I; KEGG: mex:Mext_0341 cytochrome c class I YP_001923134.1 PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_0342 extracellular solute-binding protein family 5 YP_001923135.1 PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_0343 extracellular solute-binding protein family 5 YP_001923136.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_0344 binding-protein-dependent transport systems inner membrane component YP_001923137.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_0345 GCN5-related N-acetyltransferase YP_001923138.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_0346 AMP-dependent synthetase and ligase YP_001923139.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0347 glycosyl transferase family 2 YP_001923140.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_3797 regulatory protein TetR YP_001923141.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_3798 acriflavin resistance protein YP_001923142.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_3799 efflux transporter, RND family, MFP subunit YP_001923143.1 KEGG: mav:MAV_4187 hypothetical protein YP_001923144.1 PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_4361 ThiJ/PfpI domain protein YP_001923145.1 KEGG: mex:Mext_4264 hypothetical protein YP_001923146.1 PFAM: heat shock protein Hsp20; KEGG: mex:Mext_4263 heat shock protein HSP20 YP_001923147.1 KEGG: mex:Mext_4857 hypothetical protein YP_001923148.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_001923149.1 Catalyzes the deamination of dCTP to form dUTP YP_001923150.1 KEGG: mex:Mext_0371 hypothetical protein YP_001923151.1 protein associated with Co2+ and Mg2+ efflux YP_001923152.1 TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mex:Mext_0369 acetylornithine deacetylase (ArgE) YP_001923153.1 PFAM: protein of unknown function UPF0187; KEGG: mex:Mext_0368 protein of unknown function UPF0187 YP_001923154.1 KEGG: mex:Mext_0373 transport protein, YfdC-like protein YP_001923155.1 PFAM: molybdopterin binding domain; KEGG: mex:Mext_0374 molybdopterin binding domain YP_001923156.1 PFAM: sugar fermentation stimulation protein; KEGG: mex:Mext_0375 sugar fermentation stimulation protein YP_001923157.1 TIGRFAM: methyltransferase FkbM family; KEGG: mex:Mext_0376 methyltransferase FkbM family YP_001923158.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_0377 alpha/beta hydrolase fold YP_001923159.1 KEGG: mex:Mext_0378 hypothetical protein YP_001923160.1 PFAM: ABC transporter; KEGG: mex:Mext_0379 ABC transporter YP_001923161.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_0380 ABC transporter YP_001923162.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mex:Mext_0381 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_001923163.1 KEGG: mex:Mext_0382 hypothetical protein YP_001923164.1 KEGG: mex:Mext_0383 hypothetical protein YP_001923165.1 KEGG: mex:Mext_0384 hypothetical protein YP_001923166.1 KEGG: mex:Mext_0385 molybdopterin-guanine dinucleotide biosynthesis protein A YP_001923167.1 KEGG: mex:Mext_0386 hypothetical protein YP_001923168.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: mex:Mext_0387 cytoplasmic chaperone TorD family protein YP_001923169.1 TIGRFAM: formate dehydrogenase region TAT target; KEGG: mex:Mext_0388 formate dehydrogenase region TAT target YP_001923170.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mex:Mext_0389 molybdopterin oxidoreductase YP_001923171.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mex:Mext_0390 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_001923172.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: mex:Mext_0391 formate dehydrogenase, gamma subunit YP_001923173.1 KEGG: mex:Mext_0392 hypothetical protein YP_001923174.1 KEGG: mex:Mext_0393 hypothetical protein YP_001923175.1 KEGG: mex:Mext_0394 hypothetical protein YP_001923177.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_0395 regulatory protein TetR YP_001923178.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_0396 efflux transporter, RND family, MFP subunit YP_001923179.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_0397 acriflavin resistance protein YP_001923180.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons YP_001923181.1 KEGG: mex:Mext_0400 hypothetical protein YP_001923182.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs YP_001923183.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine YP_001923184.1 KEGG: mex:Mext_0403 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001923185.1 KEGG: mex:Mext_0404 extracellular ligand-binding receptor YP_001923186.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_0405 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_001923187.1 PFAM: protein of unknown function UPF0102; KEGG: mex:Mext_0406 protein of unknown function UPF0102 YP_001923188.1 PFAM: response regulator receiver; KEGG: mex:Mext_0407 response regulator receiver YP_001923189.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: mex:Mext_0408 substrate-binding region of ABC-type glycine betaine transport system YP_001923190.1 KEGG: mex:Mext_0409 binding-protein-dependent transport systems inner membrane component YP_001923191.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_0410 binding-protein-dependent transport systems inner membrane component YP_001923192.1 KEGG: sil:SPO2406 ISSpo6, transposase orf A YP_001923193.1 PFAM: isochorismatase hydrolase; KEGG: mms:mma_1928 hypothetical protein YP_001923194.1 PFAM: peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_0411 ErfK/YbiS/YcfS/YnhG family protein YP_001923195.1 PFAM: extensin; KEGG: mex:Mext_0412 extensin family protein YP_001923196.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: mex:Mext_0413 peptidyl-dipeptidase DCP YP_001923197.1 PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: mex:Mext_0414 formate--tetrahydrofolate ligase YP_001923198.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mex:Mext_0415 heavy metal transport/detoxification protein YP_001923199.1 PFAM: EAL domain protein; KEGG: mex:Mext_0416 EAL domain protein YP_001923200.1 KEGG: mex:Mext_0417 hypothetical protein YP_001923201.1 KEGG: mex:Mext_0418 chemotaxis protein YP_001923202.1 PFAM: response regulator receiver; KEGG: mex:Mext_0419 response regulator receiver YP_001923203.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; riboflavin kinase; KEGG: mex:Mext_0420 riboflavin biosynthesis protein RibF YP_001923204.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_0421 glyoxylate reductase YP_001923205.1 PFAM: protein of unknown function DUF1058; KEGG: mex:Mext_0422 protein of unknown function DUF1058 YP_001923206.1 PFAM: ferric-uptake regulator; KEGG: mex:Mext_0423 ferric-uptake regulator YP_001923207.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP YP_001923208.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP YP_001923210.1 KEGG: mex:Mext_0426 short-chain dehydrogenase/reductase SDR YP_001923211.1 KEGG: mex:Mext_0427 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_001923212.1 PFAM: DoxX family protein; KEGG: mex:Mext_0428 DoxX family protein YP_001923213.1 KEGG: mex:Mext_0429 tetratricopeptide TPR_4 protein YP_001923214.1 KEGG: mex:Mext_0430 hypothetical protein YP_001923215.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: mex:Mext_0431 oligopeptidase B YP_001923216.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_0432 ROSMUCR transcriptional regulator YP_001923217.1 KEGG: mex:Mext_0433 hypothetical protein YP_001923218.1 KEGG: mex:Mext_0434 hypothetical protein YP_001923219.1 PFAM: Fe-S metabolism associated SufE; KEGG: mex:Mext_0435 Fe-S metabolism associated SufE YP_001923220.1 KEGG: mex:Mext_0436 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation/phosphoacceptor; hypothetical protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein YP_001923221.1 KEGG: mex:Mext_0437 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001923222.1 KEGG: mex:Mext_0438 hypothetical protein YP_001923223.1 KEGG: mex:Mext_0439 hypothetical protein YP_001923224.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_0440 glyoxalase/bleomycin resistance protein/dioxygenase YP_001923225.1 KEGG: mex:Mext_0541 hypothetical protein YP_001923226.1 TIGRFAM: aminopeptidase N; PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: mex:Mext_0542 aminopeptidase N YP_001923227.1 KEGG: mex:Mext_0543 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001923228.1 TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mex:Mext_0544 arginase YP_001923229.1 KEGG: mex:Mext_0545 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_001923230.1 KEGG: mex:Mext_0546 hypothetical protein YP_001923231.1 KEGG: mex:Mext_0547 hypothetical protein YP_001923232.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: mex:Mext_0548 CutA1 divalent ion tolerance protein YP_001923233.1 PFAM: ATP-NAD/AcoX kinase; KEGG: mex:Mext_0549 NAD(+) kinase YP_001923234.1 PFAM: protein of unknown function DUF1674; KEGG: mex:Mext_0550 protein of unknown function DUF1674 YP_001923235.1 PFAM: Fmu (Sun) domain protein; methyltransferase type 11; KEGG: mex:Mext_0551 Fmu (Sun) domain protein YP_001923236.1 KEGG: mex:Mext_0552 hypothetical protein YP_001923237.1 KEGG: mex:Mext_0553 hypothetical protein YP_001923238.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III; KEGG: mex:Mext_0554 aminotransferase class I and II YP_001923239.1 KEGG: mex:Mext_0555 hypothetical protein YP_001923240.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: mex:Mext_0556 malonyl CoA-acyl carrier protein transacylase YP_001923241.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: mex:Mext_0557 3-oxoacyl-(acyl-carrier-protein) reductase YP_001923242.1 carries the fatty acid chain in fatty acid biosynthesis YP_001923243.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: mex:Mext_0559 3-oxoacyl-(acyl-carrier-protein) synthase 2 YP_001923244.1 PFAM: aminodeoxychorismate lyase; KEGG: mex:Mext_0560 aminodeoxychorismate lyase YP_001923245.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: mex:Mext_0561 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_001923246.1 PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: mex:Mext_0562 kojibiose phosphorylase YP_001923247.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: mex:Mext_0563 acetate kinase YP_001923248.1 PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein; KEGG: mex:Mext_0564 secretion protein HlyD family protein YP_001923249.1 PFAM: ABC transporter; ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_0565 ABC transporter YP_001923250.1 PFAM: ABC transporter; KEGG: mex:Mext_0566 ABC transporter YP_001923251.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: mex:Mext_0567 phosphoketolase YP_001923252.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Phytochrome central region domain protein; PAS fold-2 domain protein; KEGG: atc:AGR_C_3620 cyanobacterial phytochrome B YP_001923253.1 PFAM: response regulator receiver; KEGG: atu:Atu1989 two component response regulator YP_001923254.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rpc:RPC_4889 PAS/PAC sensor hybrid histidine kinase YP_001923255.1 PFAM: ABC transporter; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mex:Mext_0569 ABC transporter YP_001923256.1 PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_0570 extracellular solute-binding protein family 1 YP_001923257.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_0571 binding-protein-dependent transport systems inner membrane component YP_001923259.1 KEGG: mex:Mext_0572 hypothetical protein YP_001923260.1 PFAM: protein of unknown function DUF540; KEGG: mex:Mext_0573 protein of unknown function DUF540 YP_001923261.1 PFAM: Kelch repeat-containing protein; Kelch repeat protein; KEGG: mex:Mext_0574 kelch repeat-containing protein YP_001923262.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_0575 amine oxidase YP_001923263.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_0576 cyclic nucleotide-binding YP_001923264.1 PFAM: cupin; KEGG: mex:Mext_0577 cupin 2 conserved barrel domain protein YP_001923265.1 KEGG: mex:Mext_0578 hypothetical protein YP_001923267.1 KEGG: mex:Mext_0579 hypothetical protein YP_001923269.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_0581 sulfate ABC transporter, periplasmic sulfate-binding protein YP_001923270.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_0582 sulfate ABC transporter, inner membrane subunit CysT YP_001923271.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_0583 sulfate ABC transporter, inner membrane subunit CysW YP_001923272.1 KEGG: mex:Mext_0584 sulfate ABC transporter ATPase; TIGRFAM: sulfate ABC transporter ATPase; PFAM: ABC transporter; SMART: AAA ATPase YP_001923273.1 KEGG: mex:Mext_0585 hypothetical protein of unknown function YP_001923274.1 KEGG: mex:Mext_0586 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein YP_001923275.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_001923276.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0588 glycosyl transferase family 2 YP_001923277.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0589 glycosyl transferase family 2 YP_001923278.1 KEGG: mex:Mext_0590 hypothetical protein YP_001923279.1 PFAM: Invasion associated locus B family protein; KEGG: mex:Mext_0591 invasion associated locus B family protein YP_001923280.1 KEGG: mex:Mext_0592 hypothetical protein YP_001923281.1 PFAM: protein of unknown function DUF45; KEGG: mex:Mext_0593 protein of unknown function DUF45 YP_001923282.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mex:Mext_0594 polyhydroxyalkanoate depolymerase, intracellular YP_001923283.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0595 ATP-binding region ATPase domain protein YP_001923284.1 PFAM: response regulator receiver; KEGG: mex:Mext_0596 response regulator receiver YP_001923285.1 KEGG: mex:Mext_0597 exported protein of unknown function YP_001923286.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: mex:Mext_0598 phosphoribosylformylglycinamidine synthase, PurS YP_001923287.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_001923288.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_001923289.1 PFAM: inositol monophosphatase; KEGG: mex:Mext_0601 inositol-phosphate phosphatase YP_001923290.1 PFAM: thiamine monophosphate synthase; KEGG: mex:Mext_0602 thiamine monophosphate synthase YP_001923291.1 PFAM: thiazole biosynthesis family protein; KEGG: mex:Mext_0603 thiazole biosynthesis family protein YP_001923292.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: mex:Mext_0604 thiamine biosynthesis protein ThiS YP_001923293.1 TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: mex:Mext_0605 glycine oxidase ThiO YP_001923294.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_2285 chemotaxis sensory transducer YP_001923295.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_0606 adenylyl cyclase class-3/4/guanylyl cyclase YP_001923296.1 KEGG: mex:Mext_0607 hypothetical protein YP_001923297.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_0608 helix-turn-helix-domain containing protein AraC type YP_001923298.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_0609 major facilitator superfamily MFS_1 YP_001923299.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria YP_001923300.1 synthesizes RNA primers at the replication forks YP_001923301.1 PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: mex:Mext_0612 gluconolactonase YP_001923302.1 KEGG: mex:Mext_0613 major royal jelly protein YP_001923303.1 KEGG: mex:Mext_0614 GatB/YqeY YP_001923304.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; carbamoyl-phosphate synthase small chain; KEGG: mex:Mext_0615 carbamoyl-phosphate synthase, small subunit YP_001923305.1 KEGG: mex:Mext_0616 hypothetical protein YP_001923306.1 PFAM: plasmid stabilization system; KEGG: rpd:RPD_0573 plasmid stabilization system YP_001923307.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: rpc:RPC_0160 transcriptional regulators, CopG/Arc/MetJ DNA-binding domain YP_001923308.1 KEGG: mex:Mext_0617 hypothetical protein YP_001923309.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella YP_001923310.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella YP_001923311.1 PFAM: flagellar hook-basal body complex protein FliE; KEGG: mex:Mext_0620 flagellar hook-basal body complex protein FliE YP_001923312.1 makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella YP_001923313.1 KEGG: mex:Mext_0622 FlgA, flagellar basal-body P-ring formation protein YP_001923314.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella YP_001923315.1 KEGG: mex:Mext_0624 conserved hypothetical proteinn YP_001923316.1 PFAM: flagellar L-ring protein; KEGG: mex:Mext_0625 flagellar L-ring protein YP_001923317.1 KEGG: mex:Mext_0626 flagellar basal body-associated protein FliL YP_001923318.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagellum YP_001923319.1 PFAM: plasmid stabilization system; KEGG: rle:pRL70123 stabilisation protein YP_001923320.1 KEGG: rpe:RPE_0663 hypothetical protein YP_001923321.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod YP_001923322.1 KEGG: mex:Mext_0630 hypothetical protein YP_001923323.1 PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_0631 OmpA/MotB domain protein YP_001923324.1 a periplasmic protein that interacts with and stabilizes MotB; in Rhizobium, interactions between MotB and MotC at the periplasmic surface of the motor control the energy flux or the energy coupling that drives flagellar rotation YP_001923325.1 PFAM: flagellar hook-length control protein; KEGG: mex:Mext_0633 hypothetical protein YP_001923326.1 PFAM: lytic transglycosylase; KEGG: mex:Mext_0634 lytic transglycosylase catalytic YP_001923327.1 PFAM: transcriptional regulator domain protein; KEGG: mex:Mext_0635 transcriptional regulator domain protein YP_001923328.1 KEGG: mex:Mext_0636 hypothetical protein YP_001923329.1 hypothetical protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella YP_001923330.1 PFAM: flagellar motor switch protein FliG; KEGG: mex:Mext_0638 flagellar motor switch protein FliG YP_001923331.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: mex:Mext_0639 flagellar motor switch protein FliN YP_001923332.1 KEGG: mex:Mext_0640 hypothetical protein YP_001923333.1 KEGG: mex:Mext_0641 hypothetical protein YP_001923334.1 PFAM: flagellar motor switch protein FliM; KEGG: mex:Mext_0642 flagellar motor switch protein FliM YP_001923335.1 KEGG: mex:Mext_0643 chemotaxis MotA protein YP_001923336.1 heat shock protein involved in degradation of misfolded proteins YP_001923337.1 heat shock protein involved in degradation of misfolded proteins YP_001923338.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_0646 protein of unknown function DUF6 transmembrane YP_001923339.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_0647 hypothetical protein YP_001923340.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mex:Mext_0648 Rieske (2Fe-2S) domain protein YP_001923341.1 KEGG: mex:Mext_0649 hypothetical protein YP_001923342.1 KEGG: mex:Mext_0650 hypothetical protein YP_001923343.1 KEGG: mex:Mext_0651 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_001923344.1 TIGRFAM: chorismate mutase; PFAM: Chorismate mutase; KEGG: mex:Mext_0652 chorismate mutase YP_001923345.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_001923346.1 Essential for efficient processing of 16S rRNA YP_001923347.1 KEGG: mex:Mext_0655 hypothetical protein YP_001923348.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_0656 methyltransferase type 11 YP_001923349.1 KEGG: mex:Mext_0657 hypothetical protein YP_001923350.1 KEGG: mex:Mext_0658 tRNA (guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_001923351.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate YP_001923352.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_001923353.1 KEGG: mex:Mext_0661 hypothetical protein YP_001923354.1 KEGG: mex:Mext_0662 translation initiation factor, aIF-2BI family; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related YP_001923355.1 KEGG: mex:Mext_0663 DNA-binding protein YP_001923356.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mex:Mext_0664 MATE efflux family protein YP_001923357.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_0665 ABC transporter YP_001923358.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mex:Mext_0666 tRNA/rRNA methyltransferase (SpoU) YP_001923359.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_0672 TonB-dependent siderophore receptor YP_001923360.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis YP_001923361.1 KEGG: mex:Mext_0674 conserved hypothetical protein; deoxyribonuclease YP_001923362.1 KEGG: mex:Mext_0675 aspartate aminotransferase YP_001923363.1 PFAM: transcriptional regulator domain protein; KEGG: mex:Mext_0676 transcriptional regulator domain protein YP_001923364.1 PFAM: flagellin domain protein; KEGG: mex:Mext_0677 flagellin domain protein YP_001923365.1 PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_0678 type IV pilus assembly PilZ YP_001923366.1 KEGG: mex:Mext_0679 hypothetical protein YP_001923367.1 PFAM: protein of unknown function DUF1217; KEGG: mex:Mext_0680 protein of unknown function DUF1217 YP_001923368.1 PFAM: flagellar basal body rod protein; KEGG: mex:Mext_0681 flagellar basal body rod protein YP_001923369.1 involved in type III protein export during flagellum assembly YP_001923370.1 the hook connects flagellar basal body to the flagellar filament YP_001923371.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook YP_001923372.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella YP_001923373.1 acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella YP_001923374.1 post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella YP_001923375.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella YP_001923376.1 FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella YP_001923377.1 hypothetical protein involved in the flagellar export apparatus YP_001923378.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium has one thick and several thin flagella; the Bradyrhizobium protein in this cluster are associated with the thin flagella YP_001923379.1 KEGG: mex:Mext_0692 hypothetical protein YP_001923380.1 KEGG: mex:Mext_0693 hypothetical protein YP_001923381.1 KEGG: mex:Mext_0694 hypothetical protein YP_001923382.1 KEGG: mex:Mext_0695 hypothetical protein YP_001923383.1 KEGG: mex:Mext_0697 hypothetical protein YP_001923384.1 PFAM: protein of unknown function DUF1491; KEGG: mex:Mext_0698 protein of unknown function DUF1491 YP_001923385.1 PFAM: peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_0699 peptidoglycan-binding domain 1 protein YP_001923386.1 KEGG: mex:Mext_0700 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_001923387.1 KEGG: mex:Mext_0701 hypothetical protein YP_001923388.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: mex:Mext_0702 cytochrome d ubiquinol oxidase, subunit II YP_001923390.1 KEGG: mex:Mext_0706 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_001923391.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3823 LysR substrate-binding YP_001923393.1 PFAM: protein of unknown function DUF1275; KEGG: mex:Mext_3824 protein of unknown function DUF1275 YP_001923394.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile YP_001923395.1 PFAM: protein of unknown function UPF0066; KEGG: mex:Mext_0709 protein of unknown function UPF0066 YP_001923396.1 KEGG: mex:Mext_0710 protein involved in cellulose biosynthesis (CelD)-like protein YP_001923397.1 PFAM: protein of unknown function DUF201; KEGG: mex:Mext_0711 protein of unknown function DUF201 YP_001923398.1 PFAM: Protein of unknown function DUF1810; KEGG: mex:Mext_0712 protein of unknown function DUF1810 YP_001923399.1 PFAM: histone deacetylase superfamily; KEGG: mex:Mext_0713 histone deacetylase superfamily YP_001923400.1 KEGG: mex:Mext_0714 ceramide glucosyltransferase YP_001923401.1 KEGG: mex:Mext_0715 chromosome segregation ATPase-like protein YP_001923402.1 KEGG: mex:Mext_0716 hypothetical protein YP_001923403.1 KEGG: mex:Mext_0717 hypothetical protein YP_001923404.1 TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: mex:Mext_0718 ethanolamine transproter YP_001923405.1 PFAM: glutamine amidotransferase class-I; KEGG: mex:Mext_0721 glutamine amidotransferase class-I YP_001923406.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_0722 aldo/keto reductase YP_001923407.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: mex:Mext_0723 AraC-type transcriptional regulator domain protein YP_001923408.1 TIGRFAM: arsenical pump hypothetical protein; PFAM: arsenic pump hypothetical protein; citrate transporter; KEGG: mex:Mext_1911 arsenical pump hypothetical protein YP_001923409.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: mex:Mext_3865 arsenate reductase YP_001923410.1 PFAM: regulatory protein ArsR; KEGG: mex:Mext_3864 regulatory protein ArsR YP_001923411.1 TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: mex:Mext_1907 arsenical resistance protein ArsH YP_001923412.1 KEGG: mex:Mext_0725 DedA family YP_001923413.1 KEGG: mex:Mext_0726 disulphide bond formation protein DsbB YP_001923414.1 PFAM: ParB-like nuclease; KEGG: mex:Mext_0727 ParB-like nuclease YP_001923415.1 PFAM: protein of unknown function DUF55; KEGG: mex:Mext_0729 protein of unknown function DUF55 YP_001923416.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_001923417.1 KEGG: mex:Mext_0731 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; hypothetical protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein YP_001923418.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_001923419.1 KEGG: mex:Mext_0733 uroporphyrinogen III synthase HEM4 YP_001923420.1 KEGG: mex:Mext_0734 hypothetical protein YP_001923421.1 PFAM: HemY domain protein; KEGG: mex:Mext_0735 HemY domain protein YP_001923423.1 PFAM: helicase domain protein; KEGG: mex:Mext_0811 helicase domain protein YP_001923424.1 KEGG: mex:Mext_1325 hypothetical protein YP_001923425.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: mex:Mext_0212 C4-dicarboxylate transporter/malic acid transport protein YP_001923426.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_0211 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001923427.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_0210 (2Fe-2S)-binding domain protein YP_001923428.1 TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_1687 zinc-binding alcohol dehydrogenase family protein YP_001923429.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_1688 protein of unknown function DUF6 transmembrane YP_001923430.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1683 LysR substrate-binding YP_001923431.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_0209 short-chain dehydrogenase/reductase SDR YP_001923432.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: mex:Mext_0208 ThiJ/PfpI domain protein YP_001923434.1 PFAM: Sel1 domain protein repeat-containing protein; peptidase C14 caspase catalytic subunit p20; KEGG: mag:amb0484 hypothetical protein YP_001923435.1 KEGG: ade:Adeh_3797 hypothetical protein YP_001923436.1 KEGG: pin:Ping_0445 hypothetical protein involved in colicin uptake-like protein YP_001923437.1 KEGG: scl:sce5948 hypothetical protein YP_001923438.1 KEGG: mgm:Mmc1_0184 hypothetical protein YP_001923439.1 KEGG: scl:sce7119 probable serine protease YP_001923440.1 KEGG: smd:Smed_0468 plasmid stability protein StbC YP_001923441.1 PFAM: PilT protein domain protein; KEGG: smd:Smed_0469 PilT protein domain protein YP_001923442.1 PFAM: OmpA/MotB domain protein; KEGG: bja:blr0354 hypothetical protein YP_001923443.1 KEGG: mgm:Mmc1_2010 hypothetical protein YP_001923444.1 KEGG: xau:Xaut_0345 hypothetical protein YP_001923445.1 KEGG: azc:AZC_3664 hypothetical protein YP_001923446.1 KEGG: bja:blr6748 hypothetical protein YP_001923447.1 KEGG: mex:Mext_0812 hypothetical protein YP_001923448.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: mex:Mext_0813 RNA binding S1 domain protein YP_001923449.1 PFAM: ABC transporter; KEGG: mex:Mext_0815 ABC transporter YP_001923450.1 KEGG: mex:Mext_0816 capsule polysaccharide export protein-like protein YP_001923451.1 KEGG: mex:Mext_0817 hypothetical protein YP_001923452.1 KEGG: mex:Mext_0818 hypothetical protein YP_001923453.1 hypothetical protein involved in the flagellar export apparatus YP_001923454.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: mex:Mext_0820 chemotaxis sensory transducer YP_001923456.1 KEGG: mex:Mext_0821 hypothetical protein YP_001923458.1 TIGRFAM: flagellar export protein FliJ; KEGG: mex:Mext_0822 flagellar export protein FliJ YP_001923459.1 involved in type III protein export during flagellum assembly YP_001923460.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0824 response regulator receiver YP_001923461.1 KEGG: mex:Mext_0825 hypothetical protein YP_001923462.1 KEGG: mex:Mext_0826 chloramphenicol acetyltransferase YP_001923463.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate YP_001923464.1 PFAM: acetamidase/formamidase; KEGG: mex:Mext_0828 acetamidase/formamidase YP_001923465.1 KEGG: mex:Mext_0829 hypothetical protein YP_001923466.1 KEGG: mex:Mext_0830 hypothetical protein YP_001923467.1 PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: mex:Mext_0831 glycosyl transferase family 2 YP_001923468.1 KEGG: mex:Mext_0832 hypothetical protein YP_001923469.1 KEGG: mex:Mext_0833 hypothetical protein YP_001923470.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mex:Mext_0834 peptidase M20 YP_001923471.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_0835 (2Fe-2S)-binding domain protein YP_001923472.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mex:Mext_0836 molybdopterin dehydrogenase FAD-binding YP_001923473.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_0837 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001923474.1 TIGRFAM: CrcB protein; PFAM: camphor resistance CrcB protein; KEGG: mex:Mext_0838 camphor resistance CrcB protein YP_001923475.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_0839 protein of unknown function DUF6 transmembrane YP_001923476.1 PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: mex:Mext_0840 peptidase M15D VanX D-ala-D-ala dipeptidase YP_001923477.1 KEGG: mex:Mext_0841 hypothetical protein YP_001923478.1 KEGG: mex:Mext_0842 hypothetical protein YP_001923479.1 KEGG: mex:Mext_0843 transcriptional regulator, XRE family YP_001923480.1 PFAM: protein of unknown function DUF891; KEGG: bja:blr2113 hypothetical protein YP_001923481.1 PFAM: regulatory protein MarR; KEGG: mex:Mext_0844 regulatory protein MarR YP_001923482.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0845 glycosyl transferase family 2 YP_001923483.1 TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: nucleotidyl transferase; KEGG: mex:Mext_0846 glucose-1-phosphate cytidylyltransferase YP_001923484.1 TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; KEGG: mex:Mext_0847 CDP-glucose 4,6-dehydratase YP_001923485.1 PFAM: methyltransferase type 11; methyltransferase type 12; methyltransferase domain protein; C-methyltransferase; KEGG: mex:Mext_0848 C-methyltransferase YP_001923486.1 PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: mex:Mext_0849 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001923487.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mex:Mext_0850 NAD-dependent epimerase/dehydratase YP_001923488.1 PFAM: response regulator receiver; KEGG: mex:Mext_0851 response regulator receiver YP_001923489.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: mex:Mext_0852 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_001923490.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine YP_001923491.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor YP_001923492.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel; KEGG: mex:Mext_0855 glycine cleavage system T protein YP_001923493.1 KEGG: mex:Mext_0856 hypothetical protein YP_001923494.1 KEGG: mex:Mext_0857 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class V; aminotransferase class I and II YP_001923495.1 PFAM: NLP/P60 protein; KEGG: mex:Mext_0858 NLP/P60 protein YP_001923496.1 KEGG: mex:Mext_0859 hypothetical protein YP_001923497.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_0860 short-chain dehydrogenase/reductase SDR YP_001923498.1 KEGG: atc:AGR_C_1712 PemK YP_001923499.1 PFAM: SpoVT/AbrB domain protein; KEGG: atc:AGR_C_1711 plasmid stable inheritance protein YP_001923500.1 PFAM: MgtC/SapB transporter; KEGG: mex:Mext_0861 MgtC/SapB transporter YP_001923501.1 PFAM: ATPase activities AAA_3; ATPase activities AAA_5; KEGG: mex:Mext_0862 ATPase activities AAA_3 YP_001923502.1 KEGG: mex:Mext_0863 hypothetical protein YP_001923503.1 KEGG: mex:Mext_0864 hypothetical protein YP_001923504.1 PFAM: von Willebrand factor type A; KEGG: mex:Mext_0865 von Willebrand factor type A YP_001923505.1 SMART: von Willebrand factor type A; KEGG: mex:Mext_0866 von Willebrand factor type A YP_001923506.1 PFAM: TPR repeat-containing protein; hypothetical protein; KEGG: mex:Mext_0867 tetratricopeptide TPR_2 repeat protein YP_001923507.1 KEGG: mex:Mext_0868 hypothetical protein YP_001923508.1 KEGG: mex:Mext_0869 hypothetical protein YP_001923509.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_0870 protein of unknown function DUF6 transmembrane YP_001923510.1 KEGG: mex:Mext_0871 hypothetical protein YP_001923511.1 KEGG: mex:Mext_0872 hypothetical protein YP_001923512.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: methionine sulfoxide reductase B; KEGG: mex:Mext_0873 methionine-R-sulfoxide reductase YP_001923513.1 PFAM: ribonuclease BN; KEGG: mex:Mext_0874 ribonuclease BN YP_001923514.1 KEGG: mex:Mext_0875 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001923515.1 catalyzes the formation of malonyl-CoA from malonate and CoA YP_001923516.1 KEGG: mex:Mext_0877 hypothetical protein YP_001923517.1 PFAM: Collagen triple helix repeat; KEGG: mex:Mext_0878 collagen triple helix repeat YP_001923518.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: mex:Mext_0879 HI0933 family protein YP_001923519.1 PFAM: integral hypothetical protein TerC; KEGG: mex:Mext_0880 integral hypothetical protein TerC YP_001923520.1 KEGG: mex:Mext_0881 hypothetical protein YP_001923521.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_0882 intracellular protease, PfpI family YP_001923522.1 KEGG: mex:Mext_0883 hypothetical protein YP_001923523.1 KEGG: mex:Mext_0884 hypothetical protein YP_001923524.1 KEGG: mex:Mext_0885 hypothetical protein YP_001923525.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_0886 cold-shock protein DNA-binding YP_001923526.1 KEGG: mex:Mext_0887 hypothetical protein YP_001923527.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_0888 hypothetical protein YP_001923528.1 KEGG: mex:Mext_0889 hypothetical protein YP_001923529.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_0890 major facilitator superfamily MFS_1 YP_001923530.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; protein of unknown function DUF140; KEGG: mex:Mext_0891 protein of unknown function DUF140 YP_001923531.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_0892 ABC transporter YP_001923532.1 PFAM: Mammalian cell entry related domain protein; KEGG: mex:Mext_0893 mammalian cell entry related domain protein YP_001923533.1 KEGG: mex:Mext_0894 protein of unknown function DUF330 YP_001923534.1 PFAM: inositol monophosphatase; KEGG: mex:Mext_0895 inositol monophosphatase YP_001923535.1 KEGG: mex:Mext_0896 hypothetical protein YP_001923536.1 KEGG: mex:Mext_3786 hypothetical protein YP_001923537.1 TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: mex:Mext_0897 4-hydroxybenzoate polyprenyl transferase YP_001923538.1 KEGG: mex:Mext_0898 conserved hypothetical protein; signal peptide YP_001923539.1 PFAM: protein of unknown function DUF558; KEGG: mex:Mext_0899 protein of unknown function DUF558 YP_001923540.1 PFAM: asparaginase/glutaminase; KEGG: mex:Mext_0900 asparaginase/glutaminase YP_001923541.1 KEGG: mex:Mext_0901 glutamate--cysteine ligase; TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GCS2 YP_001923542.1 KEGG: scl:sce3633 hypothetical protein YP_001923543.1 KEGG: mex:Mext_0902 hypothetical protein YP_001923544.1 PFAM: SirA family protein; KEGG: mex:Mext_0903 SirA family protein YP_001923545.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_0904 NUDIX hydrolase YP_001923547.1 KEGG: mex:Mext_0905 hypothetical protein YP_001923548.1 KEGG: mex:Mext_0906 hypothetical protein YP_001923549.1 PFAM: porin; KEGG: mex:Mext_1182 porin YP_001923552.1 KEGG: bbt:BBta_7049 hypothetical protein YP_001923553.1 KEGG: bra:BRADO1007 conserved hypothetical protein; signal peptide YP_001923554.1 KEGG: mex:Mext_0907 conserved hypothetical transmembrane signal peptide protein YP_001923555.1 PFAM: protein of unknown function DUF1289; KEGG: mex:Mext_0908 protein of unknown function DUF1289 YP_001923556.1 KEGG: mex:Mext_0909 hypothetical protein YP_001923557.1 KEGG: xau:Xaut_4954 hypothetical protein YP_001923558.1 KEGG: xau:Xaut_4955 hypothetical protein YP_001923559.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: mex:Mext_0910 cobalamin 5'-phosphate synthase YP_001923560.1 KEGG: mex:Mext_0911 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_001923561.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0912 ATP-binding region ATPase domain protein YP_001923562.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_0913 (2Fe-2S)-binding domain protein YP_001923563.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_0914 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001923564.1 KEGG: mex:Mext_0915 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001923565.1 PFAM: amidase; KEGG: mex:Mext_0916 amidase YP_001923566.1 PFAM: extensin; KEGG: mex:Mext_0917 extensin family protein YP_001923567.1 KEGG: mex:Mext_0918 hypothetical protein YP_001923568.1 PFAM: ribonuclease T2; KEGG: mex:Mext_0919 ribonuclease T2 YP_001923569.1 PFAM: protein of unknown function DUF519; KEGG: mex:Mext_0920 protein of unknown function DUF519 YP_001923570.1 KEGG: mex:Mext_0921 hypothetical protein YP_001923571.1 KEGG: mex:Mext_0922 hypothetical protein YP_001923572.1 PFAM: FAD linked oxidase domain protein; KEGG: mex:Mext_0923 FAD linked oxidase domain protein YP_001923573.1 PFAM: cytochrome c class I; KEGG: mex:Mext_0924 cytochrome c class I YP_001923574.1 PFAM: regulatory protein MarR; KEGG: mex:Mext_0925 regulatory protein MarR YP_001923575.1 KEGG: mex:Mext_0926 hypothetical protein YP_001923576.1 PFAM: protein of unknown function DUF1214; KEGG: mex:Mext_0927 protein of unknown function DUF1214 YP_001923577.1 KEGG: mex:Mext_0928 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_001923578.1 PFAM: protein of unknown function UPF0153; KEGG: mex:Mext_0929 protein of unknown function UPF0153 YP_001923579.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_0930 GCN5-related N-acetyltransferase YP_001923580.1 PFAM: TadE family protein; KEGG: mex:Mext_0931 TadE family protein YP_001923581.1 PFAM: TadE family protein; KEGG: mex:Mext_0932 hypothetical protein YP_001923582.1 KEGG: mex:Mext_0933 hypothetical protein YP_001923583.1 PFAM: AFG1-family ATPase; KEGG: mex:Mext_0934 AFG1-family ATPase YP_001923584.1 TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: mex:Mext_0935 DNA-3-methyladenine glycosylase YP_001923585.1 PFAM: ribonuclease H; KEGG: mex:Mext_0936 ribonuclease H YP_001923586.1 KEGG: mex:Mext_0937 hypothetical protein YP_001923588.1 KEGG: mex:Mext_0938 hypothetical protein YP_001923589.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione YP_001923591.1 PFAM: sodium/hydrogen exchanger; KEGG: mex:Mext_0940 sodium/hydrogen exchanger YP_001923592.1 PFAM: peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: mex:Mext_0941 N-acetylmuramoyl-L-alanine amidase family 2 YP_001923593.1 PFAM: heat shock protein DnaJ domain protein; KEGG: mex:Mext_0942 heat shock protein DnaJ domain protein YP_001923594.1 KEGG: mex:Mext_0943 hypothetical protein YP_001923595.1 PFAM: UreE urease accessory domain protein; KEGG: mex:Mext_0944 UreE urease accessory domain protein YP_001923598.1 PFAM: dihydrouridine synthase DuS; KEGG: mex:Mext_0946 dihydrouridine synthase DuS YP_001923599.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_0947 diguanylate cyclase YP_001923600.1 PFAM: response regulator receiver; KEGG: mex:Mext_0948 response regulator receiver YP_001923601.1 PFAM: BLUF domain protein; KEGG: mex:Mext_0949 BLUF domain protein YP_001923602.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: mex:Mext_0950 protein of unknown function DUF1078 domain protein YP_001923603.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: mex:Mext_0951 flagellar hook-associated protein FlgK YP_001923604.1 KEGG: mex:Mext_0952 hypothetical protein YP_001923605.1 KEGG: mex:Mext_0953 hypothetical protein YP_001923606.1 TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; KEGG: mex:Mext_0954 protein-(glutamine-N5) methyltransferase, release factor-specific YP_001923607.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 YP_001923608.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: mex:Mext_0957 phosphoenolpyruvate-protein phosphotransferase YP_001923609.1 KEGG: mex:Mext_0958 aspartate kinase; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_001923610.1 KEGG: mex:Mext_0959 ubiquinone biosynthesis O-methyltransferase; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: methyltransferase type 11; methyltransferase type 12 YP_001923611.1 PFAM: PEBP family protein; KEGG: mex:Mext_0960 PEBP family protein YP_001923612.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_0961 alcohol dehydrogenase zinc-binding domain protein YP_001923613.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: bra:BRADO0674 di-haem cytochrome c peroxidase YP_001923614.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_1266 chemotaxis sensory transducer YP_001923615.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity YP_001923616.1 PFAM: YceI family protein; KEGG: mex:Mext_0963 YceI family protein YP_001923617.1 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_001923618.1 KEGG: mex:Mext_0965 hypothetical protein YP_001923619.1 PFAM: response regulator receiver; KEGG: mex:Mext_0966 response regulator receiver YP_001923620.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: mex:Mext_0967 diguanylate cyclase YP_001923621.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mex:Mext_0968 transcriptional regulator, Rrf2 family YP_001923622.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine YP_001923623.1 KEGG: mex:Mext_0970 hypothetical protein YP_001923624.1 KEGG: mex:Mext_0971 hypothetical protein YP_001923625.1 KEGG: mex:Mext_0972 hypothetical protein YP_001923626.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mex:Mext_0973 cysteine synthase A YP_001923627.1 KEGG: mex:Mext_0974 hypothetical protein YP_001923628.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: mex:Mext_0975 protein of unknown function DUF306 MetA and HslJ YP_001923629.1 KEGG: mex:Mext_0976 hypothetical protein YP_001923630.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_0977 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001923631.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_0978 LysR substrate-binding YP_001923632.1 PFAM: inositol phosphatase/fructose-16-bisphosphatase; KEGG: mex:Mext_0979 inositol phosphatase/fructose-16-bisphosphatase YP_001923633.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: mex:Mext_0980 phosphoribulokinase YP_001923634.1 KEGG: mex:Mext_0981 hypothetical protein YP_001923635.1 PFAM: protein of unknown function DUF28; KEGG: mex:Mext_0982 protein of unknown function DUF28 YP_001923636.1 KEGG: mex:Mext_0984 beta-lactamase-like protein YP_001923637.1 KEGG: mex:Mext_0985 hypothetical protein YP_001923638.1 KEGG: mex:Mext_0986 hypothetical protein YP_001923639.1 PFAM: polysaccharide biosynthesis protein; KEGG: mex:Mext_0987 polysaccharide biosynthesis protein YP_001923640.1 PFAM: protein of unknown function DUF497; KEGG: mar:MAE_48250 hypothetical protein YP_001923641.1 KEGG: gox:GOX2726 hypothetical protein YP_001923642.1 KEGG: mex:Mext_0988 hypothetical protein YP_001923643.1 KEGG: mex:Mext_0989 OpgC protein YP_001923644.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: mex:Mext_0990 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_001923645.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: mex:Mext_0991 ribulose-phosphate 3-epimerase YP_001923646.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_0992 GCN5-related N-acetyltransferase YP_001923647.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: mex:Mext_0993 ornithine decarboxylase YP_001923648.1 TIGRFAM: TonB family protein; KEGG: mex:Mext_0994 TonB family protein YP_001923649.1 TIGRFAM: molybdenum cofactor synthesis domain protein; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: mex:Mext_0995 molybdenum cofactor biosynthesis protein B YP_001923650.1 TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: mex:Mext_0996 adenylosuccinate lyase YP_001923651.1 PFAM: aminotransferase class IV; KEGG: mex:Mext_0997 aminotransferase class IV YP_001923652.1 KEGG: mex:Mext_0998 hypothetical protein YP_001923653.1 PFAM: adenylosuccinate synthetase; KEGG: mex:Mext_0999 adenylosuccinate synthase YP_001923654.1 KEGG: mex:Mext_1000 hypothetical protein YP_001923655.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters YP_001923656.1 PFAM: transposase mutator type; KEGG: swi:Swit_4911 transposase, mutator type YP_001923658.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_1004 GCN5-related N-acetyltransferase YP_001923659.1 KEGG: mex:Mext_1005 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase YP_001923660.1 PFAM: inosine/uridine-preferring nucleoside hydrolase; KEGG: xac:XAC1144 inosine-uridine preferring nucleoside hydrolase YP_001923661.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0237 response regulator receiver YP_001923662.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: mex:Mext_0236 osmosensitive K channel His kinase sensor YP_001923663.1 one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex YP_001923664.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: haloacid dehalogenase; E1-E2 ATPase-associated domain protein; KEGG: mex:Mext_0234 K+-transporting ATPase, B subunit YP_001923666.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions YP_001923667.1 PFAM: peptidase M23; KEGG: mex:Mext_1023 peptidase M23B YP_001923668.1 PFAM: protein of unknown function DUF1311; KEGG: mex:Mext_1024 protein of unknown function DUF1311 YP_001923669.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: mex:Mext_1025 glutamyl-tRNA synthetase class Ic YP_001923670.1 KEGG: mex:Mext_1026 hypothetical protein YP_001923671.1 KEGG: mex:Mext_1027 hypothetical protein YP_001923672.1 molecular chaperone YP_001923673.1 KEGG: mex:Mext_1029 hypothetical protein YP_001923674.1 PFAM: gamma-glutamyltranspeptidase; KEGG: mex:Mext_1030 gamma-glutamyltransferase YP_001923675.1 PFAM: Dak kinase; Dak phosphatase; KEGG: mex:Mext_1031 glycerone kinase YP_001923676.1 PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_1032 methyltransferase type 11 YP_001923677.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1033 major facilitator superfamily MFS_1 YP_001923678.1 KEGG: mex:Mext_1034 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_001923679.1 KEGG: mex:Mext_1035 CobE protein YP_001923680.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_1036 diguanylate cyclase YP_001923681.1 TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_1039 precorrin-4 C11-methyltransferase YP_001923682.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid YP_001923683.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_1041 helix-turn-helix domain protein YP_001923684.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: mex:Mext_1042 antibiotic biosynthesis monooxygenase YP_001923685.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1043 major facilitator superfamily MFS_1 YP_001923686.1 TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: mex:Mext_1044 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_001923687.1 KEGG: mex:Mext_1045 Fe2+/Zn2+ uptake regulation protein-like protein YP_001923689.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_1046 ABC transporter YP_001923690.1 PFAM: ABC transporter; KEGG: mex:Mext_1047 ABC transporter YP_001923691.1 PFAM: exopolysaccharide synthesis ExoD; KEGG: mex:Mext_1063 exopolysaccharide synthesis ExoD YP_001923692.1 KEGG: mex:Mext_1062 hypothetical protein YP_001923693.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1061 short-chain dehydrogenase/reductase SDR YP_001923694.1 PFAM: formyl transferase domain protein; KEGG: mex:Mext_1060 formyl transferase domain protein YP_001923695.1 KEGG: mex:Mext_1059 hypothetical protein YP_001923696.1 KEGG: mex:Mext_1058 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_001923697.1 PFAM: molybdopterin binding domain; KEGG: mex:Mext_1057 molybdopterin binding domain YP_001923698.1 KEGG: mex:Mext_1056 xanthine dehydrogenase accessory factor YP_001923699.1 PFAM: protein of unknown function DUF182; KEGG: mex:Mext_1055 protein of unknown function DUF182 YP_001923700.1 PFAM: extracellular ligand-binding receptor; KEGG: mex:Mext_1054 extracellular ligand-binding receptor YP_001923701.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_001923702.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_001923703.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: mex:Mext_1051 DNA repair protein RecO YP_001923705.1 PFAM: ChaC family protein; AIG2 family protein; KEGG: mex:Mext_1050 ChaC family protein YP_001923706.1 KEGG: mex:Mext_1049 hypothetical protein YP_001923707.1 KEGG: mex:Mext_1048 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_001923709.1 KEGG: sus:acid_4182 hypothetical protein YP_001923710.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_1064 ABC transporter YP_001923711.1 TIGRFAM: lipoprotein releasing system, transhypothetical protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: mex:Mext_1065 lipoprotein releasing system, transhypothetical protein, LolC/E family YP_001923712.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_001923713.1 PFAM: protein of unknown function DUF1467; KEGG: mex:Mext_1068 protein of unknown function DUF1467 YP_001923714.1 KEGG: mex:Mext_1069 methylmalonyl-CoA epimerase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase YP_001923715.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: mex:Mext_1070 beta-lactamase domain protein YP_001923716.1 TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: mex:Mext_1071 biotin--acetyl-CoA-carboxylase ligase YP_001923717.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: mex:Mext_1072 proton-translocating NADH-quinone oxidoreductase, chain N YP_001923718.1 KEGG: mex:Mext_1073 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_001923719.1 KEGG: mex:Mext_1074 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I) YP_001923720.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: mex:Mext_1075 NADH-ubiquinone oxidoreductase chain 4L YP_001923721.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: mex:Mext_1076 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_001923722.1 Catalyzes the transfer of electrons from NADH to quinone YP_001923723.1 Catalyzes the transfer of electrons from NADH to quinone YP_001923724.1 Catalyzes the transfer of electrons from NADH to quinone YP_001923725.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase YP_001923726.1 KEGG: mex:Mext_1081 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_001923727.1 KEGG: mex:Mext_1082 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_001923728.1 KEGG: mex:Mext_1083 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_001923729.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_001923730.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: mex:Mext_1085 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_001923731.1 PFAM: SCP-like extracellular; KEGG: mex:Mext_1086 SCP-like extracellular YP_001923732.1 TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain protein; KEGG: mex:Mext_1087 pseudoazurin YP_001923733.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain oligomerisation; carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: mex:Mext_1088 carbamoyl-phosphate synthase, large subunit YP_001923734.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus YP_001923735.1 KEGG: mex:Mext_1090 hypothetical protein YP_001923736.1 PFAM: protein of unknown function DUF1022; KEGG: mex:Mext_1091 protein of unknown function DUF1022 YP_001923737.1 KEGG: mex:Mext_1092 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001923738.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1093 LysR substrate-binding YP_001923739.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_001923740.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: mex:Mext_1095 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_001923741.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: mex:Mext_1096 acetyl-CoA carboxylase, biotin carboxylase YP_001923742.1 PFAM: leucyl/phenylalanyl-tRNA--protein transferase; KEGG: mex:Mext_1097 leucyltransferase YP_001923743.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_1098 regulatory protein TetR YP_001923744.1 KEGG: mex:Mext_1099 hypothetical protein YP_001923745.1 KEGG: mex:Mext_1100 conserved hypothetical proteinn YP_001923746.1 KEGG: gdi:GDI0596 hypothetical protein YP_001923747.1 PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: mex:Mext_1101 NADH:ubiquinone oxidoreductase 17.2 kD subunit YP_001923748.1 Catalyzes the rate-limiting step in dNTP synthesis YP_001923749.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: atu:Atu4711 two component sensor kinase YP_001923750.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: atc:AGR_L_339 hypothetical protein YP_001923751.1 KEGG: rle:RL3066 transhypothetical protein YP_001923752.1 PFAM: regulatory protein MarR; KEGG: mes:Meso_2455 transcriptional regulator, MarR family YP_001923753.1 An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine YP_001923754.1 PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bmu:Bmul_5957 major facilitator superfamily MFS_1 YP_001923755.1 KEGG: xau:Xaut_3332 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969 YP_001923756.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: glutathione S-transferase domain; KEGG: xau:Xaut_3331 maleylacetoacetate isomerase YP_001923757.1 KEGG: rpc:RPC_0632 protein involved in MetA-pathway of phenol degradation-like YP_001923758.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: mex:Mext_0820 chemotaxis sensory transducer YP_001923759.1 PFAM: PRC-barrel domain protein; KEGG: bqu:BQ03250 hypothetical protein YP_001923760.1 PFAM: protein of unknown function DUF937; KEGG: mex:Mext_1884 protein of unknown function DUF937 YP_001923762.1 PFAM: CsbD family protein; KEGG: mex:Mext_0367 CsbD family protein YP_001923763.1 PFAM: CsbD family protein; KEGG: mex:Mext_0366 CsbD family protein YP_001923764.1 KEGG: mex:Mext_0365 conserved hypothetical membrane spanning protein YP_001923765.1 PFAM: CsbD family protein; KEGG: mex:Mext_0364 CsbD family protein YP_001923766.1 KEGG: acr:Acry_3194 CsbD family protein YP_001923767.1 KEGG: bam:Bamb_5247 transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001923768.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: acr:Acry_3128 glyoxalase/bleomycin resistance protein/dioxygenase YP_001923769.1 PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: oan:Oant_3913 gluconolactonase YP_001923770.1 KEGG: acr:Acry_3129 hypothetical protein YP_001923771.1 PFAM: DoxX family protein; KEGG: acr:Acry_3130 DoxX family protein YP_001923772.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: acr:Acry_3135 glucose-methanol-choline oxidoreductase YP_001923773.1 PFAM: electron transport protein SCO1/SenC; KEGG: mex:Mext_3935 electron transport protein SCO1/SenC YP_001923774.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_3934 beta-lactamase domain protein YP_001923775.1 KEGG: pen:PSEEN2851 cytochrome c YP_001923776.1 KEGG: pfo:Pfl_1977 electron transport protein SCO1/SenC YP_001923777.1 KEGG: scl:sce2139 hypothetical protein YP_001923778.1 KEGG: neu:NE0315 possible multicopper oxidase YP_001923779.1 KEGG: mex:Mext_1744 urate catabolism protein; TIGRFAM: OHCU decarboxylase; urate catabolism protein; PFAM: polysaccharide deacetylase YP_001923780.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1743 carbonate dehydratase YP_001923781.1 PFAM: protein of unknown function DUF989; KEGG: mex:Mext_1742 protein of unknown function DUF989 YP_001923782.1 TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; cupin; KEGG: mex:Mext_1741 allantoin catabolism protein YP_001923783.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate YP_001923784.1 PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: mex:Mext_1739 tetracycline transcriptional regulator YcdC domain protein YP_001923785.1 PFAM: monooxygenase; KEGG: mex:Mext_1738 luciferase family protein YP_001923786.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1737 isochorismatase hydrolase YP_001923787.1 PFAM: endoribonuclease L-PSP; KEGG: mex:Mext_1736 endoribonuclease L-PSP YP_001923788.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_1735 alpha/beta hydrolase fold YP_001923789.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: mex:Mext_1734 flavin reductase domain protein FMN-binding YP_001923790.1 KEGG: amr:AM1_0255 hypothetical protein YP_001923791.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_1733 ABC transporter YP_001923792.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_1732 binding-protein-dependent transport systems inner membrane component YP_001923793.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_1731 binding-protein-dependent transport systems inner membrane component YP_001923794.1 PFAM: NMT1/THI5 like domain protein; KEGG: mex:Mext_1730 NMT1/THI5 like domain protein YP_001923795.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mex:Mext_1729 molybdopterin dehydrogenase FAD-binding YP_001923796.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_1728 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001923797.1 TIGRFAM: guanine deaminase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mex:Mext_1727 guanine deaminase YP_001923798.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1726 LysR substrate-binding YP_001923799.1 KEGG: mex:Mext_1725 hypothetical protein YP_001923800.1 KEGG: mex:Mext_1724 hypothetical protein YP_001923801.1 Catalyzes the deamination of cytosine to uracil and ammonia YP_001923802.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1722 LysR substrate-binding YP_001923803.1 PFAM: NMT1/THI5 like domain protein; KEGG: mex:Mext_1721 NMT1/THI5 like domain protein YP_001923804.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_1720 ABC transporter YP_001923805.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_1719 binding-protein-dependent transport systems inner membrane component YP_001923806.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mex:Mext_1718 Rieske (2Fe-2S) domain protein YP_001923807.1 PFAM: NMT1/THI5 like domain protein; KEGG: mex:Mext_1717 NMT1/THI5 like domain protein YP_001923808.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: mex:Mext_1716 2OG-Fe(II) oxygenase YP_001923809.1 PFAM: FAD linked oxidase domain protein; KEGG: mex:Mext_1715 FAD linked oxidase domain protein YP_001923810.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mex:Mext_1714 NAD(P)H dehydrogenase (quinone) YP_001923811.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_1713 AMP-dependent synthetase and ligase YP_001923812.1 PFAM: creatininase; KEGG: mex:Mext_1712 creatininase YP_001923813.1 PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: mex:Mext_1711 peptidase S15 YP_001923814.1 KEGG: mex:Mext_1710 hypothetical protein YP_001923815.1 KEGG: mex:Mext_1709 hypothetical protein YP_001923816.1 PFAM: basic membrane lipoprotein; KEGG: mex:Mext_1708 basic membrane lipoprotein YP_001923817.1 KEGG: mex:Mext_1223 hypothetical protein YP_001923818.1 PFAM: monooxygenase FAD-binding; KEGG: mex:Mext_1224 monooxygenase FAD-binding YP_001923819.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_1706 ABC transporter YP_001923820.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1705 isochorismatase hydrolase YP_001923821.1 PFAM: protein of unknown function DUF497; KEGG: vei:Veis_5033 protein of unknown function DUF497 YP_001923822.1 formamide amidohydrolase; catalyzes the hydrolysis of formamide to formate YP_001923823.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_1703 inner-membrane translocator YP_001923824.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_1702 inner-membrane translocator YP_001923825.1 PFAM: basic membrane lipoprotein; KEGG: mex:Mext_1701 basic membrane lipoprotein YP_001923826.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_1700 inner-membrane translocator YP_001923827.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_1699 inner-membrane translocator YP_001923828.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_1698 ABC transporter YP_001923829.1 catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway. YP_001923830.1 KEGG: mex:Mext_1696 conserved hypothetical protein; signal peptide YP_001923831.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1695 isochorismatase hydrolase YP_001923832.1 KEGG: mex:Mext_1694 hypothetical protein YP_001923833.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_001923834.1 KEGG: mex:Mext_1692 hypothetical protein YP_001923835.1 TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: mex:Mext_1691 xanthine permease YP_001923836.1 KEGG: mex:Mext_1311 ABC-type Co2+ transport system, periplasmic component YP_001923837.1 KEGG: mex:Mext_1190 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001923838.1 KEGG: mex:Mext_4051 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001923839.1 KEGG: mex:Mext_1193 hypothetical protein YP_001923840.1 involved in the assembly of the urease metallocenter; possible nickel donor YP_001923841.1 PFAM: Urease accessory protein UreF; KEGG: mex:Mext_1195 urease accessory protein UreF YP_001923842.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_001923843.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_001923844.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: mex:Mext_1198 urease accessory protein UreG YP_001923845.1 PFAM: Urease accessory protein UreD; KEGG: mex:Mext_1199 urease accessory protein UreD YP_001923846.1 TIGRFAM: urea ABC transporter substrate-binding protein; KEGG: mex:Mext_1200 UreA ABC transporter, UreA binding protein YP_001923847.1 PFAM: protein of unknown function DUF1624; KEGG: mex:Mext_1201 protein of unknown function DUF1624 YP_001923848.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1202 TonB-dependent siderophore receptor YP_001923849.1 KEGG: mex:Mext_1203 hypothetical protein YP_001923850.1 KEGG: mex:Mext_1204 hypothetical protein YP_001923851.1 PFAM: OsmC family protein; KEGG: mex:Mext_1205 OsmC family protein YP_001923852.1 KEGG: mex:Mext_1206 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001923853.1 catalyzes the formation of oxalyl-CoA from oxalate and formyl-CoA YP_001923854.1 PFAM: CBS domain containing protein; HPP family protein?; KEGG: azc:AZC_0146 hypothetical protein YP_001923855.1 PFAM: phospholipase/carboxylesterase; KEGG: mex:Mext_1208 phospholipase/carboxylesterase YP_001923856.1 catalyzes the formation of formyl-CoA from oxalyl-CoA YP_001923857.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1211 major facilitator superfamily MFS_1 YP_001923858.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1212 major facilitator superfamily MFS_1 YP_001923859.1 PFAM: CBS domain containing protein; KEGG: mex:Mext_1213 CBS domain containing protein YP_001923860.1 KEGG: mex:Mext_1214 hypothetical protein YP_001923861.1 KEGG: mex:Mext_1215 hypothetical protein YP_001923862.1 KEGG: mex:Mext_1216 hypothetical protein YP_001923864.1 TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mex:Mext_1217 formyl-CoA transferase YP_001923865.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_1218 GntR domain protein YP_001923866.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_1219 cobalamin synthesis protein P47K YP_001923867.1 PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: mex:Mext_1220 serine-type D-Ala-D-Ala carboxypeptidase YP_001923868.1 PFAM: radical SAM domain protein; KEGG: mex:Mext_1221 hypothetical protein YP_001923869.1 TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: mex:Mext_1225 queuosine biosynthesis protein QueD YP_001923870.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: mex:Mext_1226 ExsB protein YP_001923871.1 PFAM: LmbE family protein; KEGG: mex:Mext_1227 LmbE family protein YP_001923872.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1228 glycosyl transferase family 2 YP_001923874.1 KEGG: mex:Mext_1229 hypothetical protein YP_001923875.1 KEGG: smd:Smed_3779 hypothetical protein YP_001923876.1 KEGG: mex:Mext_1230 hypothetical protein YP_001923877.1 KEGG: uma:UM05206.1 hypothetical protein YP_001923878.1 KEGG: mex:Mext_4577 hypothetical protein YP_001923879.1 KEGG: mex:Mext_1231 hypothetical protein YP_001923880.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1232 glycosyl transferase family 2 YP_001923881.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1233 glycosyl transferase group 1 YP_001923882.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: mex:Mext_1234 phosphocarrier, HPr family YP_001923883.1 PFAM: PTS system fructose subfamily IIA component; KEGG: mex:Mext_1235 PTS system fructose subfamily IIA component YP_001923884.1 KEGG: mex:Mext_1236 HPr kinase YP_001923885.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1237 ATP-binding region ATPase domain protein YP_001923886.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_1238 response regulator receiver YP_001923887.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_1239 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_001923888.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_001923889.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: mex:Mext_1241 efflux transporter, RND family, MFP subunit YP_001923890.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_1242 heavy metal efflux pump, CzcA family YP_001923891.1 PFAM: protein of unknown function DUF497; KEGG: xfa:XF1562 hypothetical protein YP_001923892.1 KEGG: sme:SMc04432 hypothetical protein YP_001923893.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: xcb:XC_1745 transcriptional regulator LacI family YP_001923894.1 TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: rru:Rru_A1972 phosphoenolpyruvate-protein phosphotransferase YP_001923895.1 KEGG: rru:Rru_A1971 PfkB; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein YP_001923896.1 TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS fructose-specific IIB subunit; KEGG: rru:Rru_A1970 PTS fructose IIC component YP_001923897.1 PFAM: carbohydrate-selective porin OprB; KEGG: gbe:GbCGDNIH1_0408 porin YP_001923898.1 KEGG: mex:Mext_1244 hypothetical protein YP_001923899.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: mex:Mext_1245 glycosyl transferase family 51 YP_001923900.1 KEGG: mex:Mext_1246 hypothetical protein YP_001923901.1 KEGG: mex:Mext_1247 conserved hypothetical protein; flagellin C-ter domain YP_001923902.1 PFAM: flagellar FlbT family protein; KEGG: mex:Mext_1248 flagellar FlbT family protein YP_001923903.1 KEGG: mex:Mext_1249 hypothetical protein YP_001923904.1 PFAM: acyltransferase 3; KEGG: mex:Mext_1250 acyltransferase 3 YP_001923905.1 PFAM: hypothetical protein; KEGG: mex:Mext_4878 hypothetical protein YP_001923906.1 KEGG: mex:Mext_1252 hypothetical protein YP_001923907.1 PFAM: protein of unknown function DUF442; KEGG: mex:Mext_1253 protein of unknown function DUF442 YP_001923908.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential YP_001923909.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bra:BRADO5120 multidrug resistance protein, EmrB-like YP_001923910.1 PFAM: secretion protein HlyD family protein; KEGG: bbt:BBta_5589 multidrug resistance protein (HlyD family), EmrA-like protein YP_001923912.1 KEGG: mex:Mext_1255 hypothetical protein YP_001923913.1 KEGG: mex:Mext_1256 hypothetical protein YP_001923914.1 PFAM: protein of unknown function DUF849; KEGG: mex:Mext_1257 protein of unknown function DUF849 YP_001923915.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase activities AAA_5; SMART: AAA ATPase; KEGG: mex:Mext_1258 sigma-54 factor interaction domain-containing protein YP_001923916.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1259 ATP-binding region ATPase domain protein YP_001923917.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_1260 ABC transporter YP_001923918.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_1261 binding-protein-dependent transport systems inner membrane component YP_001923919.1 PFAM: NMT1/THI5 like domain protein; KEGG: mex:Mext_1262 NMT1/THI5 like domain protein YP_001923920.1 blocks the formation of polar Z-ring septums YP_001923921.1 KEGG: mex:Mext_1264 hypothetical protein YP_001923922.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: mex:Mext_1265 GTP-binding protein TypA YP_001923923.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; CHASE3 domain protein; KEGG: mex:Mext_1266 chemotaxis sensory transducer YP_001923924.1 blocks the formation of polar Z-ring septums YP_001923925.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mex:Mext_1268 septum site-determining protein MinD YP_001923926.1 TIGRFAM: cell division topological specificity factor MinE; PFAM: septum formation topological specificity factor MinE; KEGG: mex:Mext_1269 cell division topological specificity factor MinE YP_001923927.1 PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_1296 major facilitator superfamily MFS_1 YP_001923928.1 PFAM: regulatory protein TetR; KEGG: pde:Pden_4681 transcriptional regulator, TetR family YP_001923929.1 PFAM: cytochrome P450; KEGG: mex:Mext_1270 cytochrome P450 YP_001923930.1 PFAM: glucose sorbosone dehydrogenase; KEGG: chu:CHU_2315 glucose/sorbosone dehydrogenase YP_001923931.1 PFAM: alpha/beta hydrolase fold; KEGG: bch:Bcen2424_4400 alpha/beta hydrolase fold YP_001923932.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: ret:RHE_PD00039 oxidoreductase protein YP_001923933.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_PD00038 probable oxidoreductase protein YP_001923934.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: ret:RHE_PD00036 probable 5-amino-6-(5-phosphoribosylamino)uracil reductase protein YP_001923935.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xau:Xaut_2588 short-chain dehydrogenase/reductase SDR YP_001923936.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: cmi:CMM_0858 UDP-glucose 4-epimerase YP_001923937.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pst:PSPTO_2864 transcriptional regulator, LysR family YP_001923938.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bsu:BSU32470 xanthine dehydrogenase YP_001923939.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; molybdopterin dehydrogenase FAD-binding; FAD linked oxidase domain protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bha:BH0748 xanthine dehydrogenase YP_001923940.1 KEGG: gdi:GDI3213 hypothetical protein YP_001923941.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mms:mma_1240 cytosine deaminase YP_001923942.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: mva:Mvan_0327 glucose-methanol-choline oxidoreductase YP_001923943.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bbt:BBta_3127 hypothetical protein YP_001923944.1 KEGG: mtp:Mthe_1623 sulfopyruvate decarboxylase YP_001923945.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_1185 transcriptional regulator, LysR family YP_001923946.1 PFAM: glutathione S-transferase domain; KEGG: gdi:GDI3206 hypothetical protein YP_001923947.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: gdi:GDI3207 oxidoreductase protein YP_001923948.1 KEGG: ret:RHE_PC00093 hypothetical protein YP_001923949.1 PFAM: basic membrane lipoprotein; KEGG: gdi:GDI3209 lipoprotein YP_001923950.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: gdi:GDI3210 ABC transporter YP_001923951.1 PFAM: inner-membrane translocator; KEGG: gdi:GDI3211 amino acid transporter YP_001923952.1 PFAM: inner-membrane translocator; KEGG: gdi:GDI3212 amino acid transporter YP_001923953.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mpt:Mpe_A0782 hydroxydechloroatrazine ethylaminohydrolase YP_001923954.1 KEGG: gdi:GDI3213 hypothetical protein YP_001923955.1 KEGG: ctc:CTC02559 citrate lyase alpha chain; TIGRFAM: citrate lyase, alpha subunit; PFAM: citrate lyase alpha subunit YP_001923956.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bra:BRADO4811 transcriptional regulatory protein, LysR family YP_001923957.1 PFAM: aldehyde Dehydrogenase_; KEGG: xau:Xaut_1357 aldehyde dehydrogenase YP_001923958.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001923959.1 KEGG: swi:Swit_4672 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region YP_001923960.1 PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: nar:Saro_1588 major facilitator superfamily MFS_1 YP_001923961.1 PFAM: HpcH/HpaI aldolase; KEGG: mlo:mlr0906 citrate lyase beta chain YP_001923962.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB3316 probable LysR-family transcriptional regulator YP_001923963.1 PFAM: aldehyde Dehydrogenase_; KEGG: dsh:Dshi_1425 aldehyde dehydrogenase YP_001923964.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: dsh:Dshi_1428 glucose-methanol-choline oxidoreductase YP_001923965.1 KEGG: ppg:PputGB1_3246 conserved hypothetical protein; signal peptide YP_001923966.1 KEGG: mex:Mext_0500 hypothetical protein YP_001923967.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_0501 methyltransferase type 12 YP_001923968.1 PFAM: phosphoglycerate mutase; KEGG: mex:Mext_0502 phosphoglycerate mutase YP_001923969.1 PFAM: myo-inositol-1-phosphate synthase; myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: mex:Mext_0503 myo-inositol-1-phosphate synthase YP_001923970.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_0504 NAD-dependent epimerase/dehydratase YP_001923971.1 KEGG: mex:Mext_0505 hypothetical protein YP_001923972.1 KEGG: mex:Mext_0506 hypothetical protein YP_001923973.1 KEGG: mex:Mext_0507 hypothetical protein YP_001923974.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_0508 glycosyl transferase group 1 YP_001923975.1 PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_0509 radical SAM domain protein YP_001923976.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_0510 NAD-dependent epimerase/dehydratase YP_001923977.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: mex:Mext_0511 NAD-dependent epimerase/dehydratase YP_001923978.1 KEGG: rle:RL3080 hypothetical protein YP_001923979.1 PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: mex:Mext_1271 SMP-30/gluconolaconase/LRE domain protein YP_001923980.1 PFAM: glycoside hydrolase 15-related; KEGG: sco:SCO3444 hypothetical protein YP_001923981.1 KEGG: mex:Mext_1273 dehydrogenase protein YP_001923982.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: mlo:mll5584 enoyl-CoA hydratase YP_001923984.1 KEGG: mex:Mext_1134 hypothetical protein YP_001923985.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1133 cellulose synthase (UDP-forming) YP_001923987.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: nmu:Nmul_A0104 Sel1-like repeat YP_001923988.1 KEGG: msm:MSMEG_1081 hypothetical protein YP_001923989.1 KEGG: msm:MSMEG_1080 large subunit of N,N-dimethylformamidase YP_001923990.1 KEGG: msm:MSMEG_1079 hypothetical protein YP_001923991.1 KEGG: bbt:BBta_1957 branched-chain amino acid ABC transporter, ATP-binding protein; TIGRFAM: urea ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: AAA ATPase YP_001923992.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: atc:AGR_pAT_797 probable ATP-binding component of ABC transporter YP_001923993.1 TIGRFAM: urea ABC transporter permease; PFAM: inner-membrane translocator; KEGG: bra:BRADO5872 branched-chain amino acid ABC transporter, permease protein YP_001923994.1 PFAM: inner-membrane translocator; KEGG: dra:DR_A0321 urea/short-chain amide ABC transporter permease YP_001923995.1 KEGG: rle:pRL120445 substrate-binding component of ABC transporter YP_001923996.1 PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_1274 carbohydrate-selective porin OprB YP_001923997.1 PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_1298 DEAD/DEAH box helicase domain protein YP_001923998.1 KEGG: bay:RBAM_011070 CypC YP_001923999.1 PFAM: CopG domain protein DNA-binding domain protein; NikR nickel binding; KEGG: rsh:Rsph17029_3078 transcriptional regulator, CopG family YP_001924000.1 KEGG: mex:Mext_3527 hypothetical protein YP_001924002.1 PFAM: response regulator receiver; KEGG: mex:Mext_0773 response regulator receiver YP_001924003.1 KEGG: xcv:XCV3849 methylase of chemotaxis methyl-accepting proteins; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; HWE histidine kinase; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001924004.1 PFAM: transposase IS4 family protein; KEGG: gdi:GDI1551 transposase YP_001924005.1 PFAM: CheB methylesterase; KEGG: xcb:XC_1290 protein-glutamate methylesterase (CheB) YP_001924006.1 PFAM: UspA domain protein; KEGG: mex:Mext_1355 UspA domain protein YP_001924007.1 PFAM: cytochrome c class I; KEGG: mex:Mext_1356 cytochrome c class I YP_001924008.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_1357 cyclic nucleotide-binding YP_001924009.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_1358 ABC transporter YP_001924010.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_1359 ABC transporter YP_001924011.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: mex:Mext_1360 cytochrome bd ubiquinol oxidase subunit I YP_001924012.1 KEGG: mex:Mext_1361 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_001924013.1 TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: mex:Mext_1362 cyd operon protein YbgT YP_001924014.1 PFAM: regulatory protein DeoR; hypothetical protein; KEGG: mex:Mext_1363 regulatory protein DeoR YP_001924015.1 PFAM: amidase; KEGG: mex:Mext_1364 amidase YP_001924016.1 PFAM: response regulator receiver; histidine kinase A domain protein; KEGG: mex:Mext_1365 response regulator receiver YP_001924017.1 KEGG: mex:Mext_1366 hypothetical protein YP_001924018.1 KEGG: mex:Mext_1367 cellulose synthase catalytic subunit (UDP-forming); TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2 YP_001924019.1 KEGG: mex:Mext_1368 hypothetical protein YP_001924020.1 PFAM: glycoside hydrolase family 8; KEGG: mex:Mext_1369 cellulase YP_001924021.1 KEGG: mex:Mext_1370 hypothetical protein YP_001924022.1 KEGG: mex:Mext_1371 hypothetical protein YP_001924023.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: mex:Mext_1007 NADH dehydrogenase YP_001924024.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL4055 LysR family transcriptional regulator YP_001924025.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bbt:BBta_4893 hypothetical protein YP_001924026.1 PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_1009 major facilitator superfamily MFS_1 YP_001924027.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity YP_001924028.1 KEGG: mex:Mext_1011 hypothetical protein YP_001924029.1 KEGG: mex:Mext_1012 exported protein of unknown function YP_001924030.1 KEGG: mex:Mext_1013 hypothetical protein YP_001924031.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1014 short-chain dehydrogenase/reductase SDR YP_001924032.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1015 isochorismatase hydrolase YP_001924033.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_1016 alcohol dehydrogenase GroES domain protein YP_001924034.1 KEGG: mex:Mext_1017 hypothetical protein YP_001924035.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1018 short-chain dehydrogenase/reductase SDR YP_001924036.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1019 short-chain dehydrogenase/reductase SDR YP_001924037.1 KEGG: mex:Mext_1020 hypothetical protein YP_001924038.1 PFAM: ABC transporter; KEGG: mex:Mext_1021 ABC transporter YP_001924039.1 KEGG: mex:Mext_1022 hypothetical protein YP_001924040.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mex:Mext_1143 protein of unknown function DUF395 YeeE/YedE YP_001924041.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mlo:msr8615 hypothetical protein YP_001924043.1 KEGG: bvi:Bcep1808_2468 hypothetical protein YP_001924045.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; Prophage CP4-57 regulatory; KEGG: cak:Caul_0469 DNA binding domain protein, excisionase family YP_001924048.1 KEGG: xau:Xaut_3646 hypothetical protein YP_001924050.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4463 ROSMUCR transcriptional regulator YP_001924051.1 KEGG: mex:Mext_0084 hypothetical protein YP_001924053.1 PFAM: acyltransferase 3; KEGG: fjo:Fjoh_3387 acyltransferase 3 YP_001924055.1 PFAM: Protein of unknown function DUF1778; KEGG: rpe:RPE_1639 hypothetical protein YP_001924056.1 KEGG: rpa:RPA3582 hypothetical protein YP_001924058.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: acr:Acry_0807 transposase IS116/IS110/IS902 family protein YP_001924059.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; CHASE3 domain protein; KEGG: mex:Mext_2838 chemotaxis sensory transducer YP_001924060.1 KEGG: mex:Mext_1875 hypothetical protein YP_001924064.1 KEGG: bps:BPSL1146 hypothetical protein YP_001924067.1 KEGG: bja:bll5004 hypothetical protein YP_001924068.1 PFAM: integrase family protein; KEGG: oan:Oant_0882 phage integrase family protein YP_001924069.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1373 glycosyl transferase group 1 YP_001924070.1 KEGG: mex:Mext_1374 hypothetical protein YP_001924071.1 KEGG: mex:Mext_1375 hypothetical protein YP_001924072.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity YP_001924073.1 PFAM: peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_1377 peptidoglycan-binding domain 1 protein YP_001924074.1 KEGG: mex:Mext_1381 hypothetical protein YP_001924075.1 PFAM: protein of unknown function DUF461; nuclear export factor GLE1; KEGG: mex:Mext_1378 protein of unknown function DUF461 YP_001924076.1 PFAM: protein of unknown function DUF461; KEGG: mex:Mext_1379 protein of unknown function DUF461 YP_001924077.1 PFAM: electron transport protein SCO1/SenC; KEGG: mex:Mext_1380 electron transport protein SCO1/SenC YP_001924078.1 KEGG: mex:Mext_1381 hypothetical protein YP_001924079.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1382 TonB-dependent receptor YP_001924080.1 KEGG: oan:Oant_4603 Rv0623 family protein transcription factor YP_001924081.1 PFAM: PilT protein domain protein; KEGG: xau:Xaut_4793 PilT protein domain protein YP_001924082.1 PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_1384 carbohydrate-selective porin OprB YP_001924083.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_1385 GntR domain protein YP_001924084.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: mex:Mext_1386 TRAP dicarboxylate transporter-DctP subunit YP_001924085.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: mex:Mext_1387 tripartite ATP-independent periplasmic transporter DctQ component YP_001924086.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: mex:Mext_1388 TRAP dicarboxylate transporter, DctM subunit YP_001924087.1 KEGG: mex:Mext_1389 hypothetical protein YP_001924088.1 KEGG: mex:Mext_1390 hypothetical protein YP_001924089.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mex:Mext_1391 pyridoxal-5'-phosphate-dependent protein beta subunit YP_001924090.1 KEGG: mex:Mext_1392 hypothetical protein YP_001924091.1 PFAM: peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_1393 peptidoglycan-binding domain 1 protein YP_001924092.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: mex:Mext_1395 alpha-2-macroglobulin domain protein YP_001924093.1 TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: mex:Mext_1396 penicillin-binding protein 1C YP_001924094.1 PFAM: small multidrug resistance protein; KEGG: mex:Mext_1397 small multidrug resistance protein YP_001924095.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_1398 helix-turn-helix domain protein YP_001924096.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: mex:Mext_1399 sortase family protein YP_001924097.1 KEGG: mex:Mext_1400 vault protein inter-alpha-trypsin domain protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: von Willebrand factor type A; Vault protein inter-alpha-trypsin domain protein; SMART: Vault protein inter-alpha-trypsin, metazoa YP_001924098.1 PFAM: phosphoglycerate mutase; KEGG: mex:Mext_1401 phosphoglycerate mutase YP_001924099.1 KEGG: mex:Mext_1402 hypothetical protein YP_001924100.1 PFAM: high-affinity nickel-transporter; KEGG: mex:Mext_1403 high-affinity nickel-transporter YP_001924101.1 PFAM: protein of unknown function DUF1007; KEGG: mex:Mext_1404 protein of unknown function DUF1007 YP_001924102.1 PFAM: cytochrome C biogenesis protein; KEGG: mex:Mext_1405 cytochrome c biogenesis protein YP_001924103.1 PFAM: cytochrome c assembly protein; KEGG: mex:Mext_1406 cytochrome c assembly protein YP_001924104.1 PFAM: CcmE/CycJ protein; KEGG: mex:Mext_1407 CcmE/CycJ protein YP_001924105.1 KEGG: mex:Mext_1408 cytochrome c-type biogenesis protein CcmI; TIGRFAM: cytochrome c-type biogenesis protein CcmI; PFAM: hypothetical protein; SMART: Tetratricopeptide domain protein YP_001924106.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1409 ATP-binding region ATPase domain protein YP_001924107.1 PFAM: Rv0623 family protein transcription factor; KEGG: mex:Mext_0005 Rv0623 family protein transcription factor YP_001924108.1 PFAM: PilT protein domain protein; KEGG: mex:Mext_0004 PilT protein domain protein YP_001924109.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_1411 response regulator receiver YP_001924110.1 KEGG: mex:Mext_1412 hypothetical protein YP_001924111.1 KEGG: mex:Mext_1413 hypothetical protein YP_001924112.1 KEGG: mex:Mext_1414 hypothetical protein YP_001924113.1 KEGG: mex:Mext_1415 hypothetical protein YP_001924114.1 PFAM: glycoside hydrolase family 24; KEGG: mex:Mext_1416 glycoside hydrolase family 24 YP_001924115.1 KEGG: mex:Mext_1417 hypothetical protein YP_001924116.1 KEGG: mex:Mext_1418 gene transfer agent (GTA) orfg15, like protein YP_001924117.1 TIGRFAM: phage cell wall peptidase, NlpC/P60 family; PFAM: NLP/P60 protein; KEGG: mex:Mext_1419 phage cell wall peptidase, NlpC/P60 family YP_001924118.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1420 hypothetical protein YP_001924119.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1421 hypothetical protein YP_001924120.1 KEGG: mex:Mext_1422 gene transfer agent (GTA) orfg11 YP_001924121.1 KEGG: mex:Mext_1423 hypothetical protein YP_001924122.1 KEGG: mex:Mext_1424 gene transfer agent (GTA) orfg10 YP_001924123.1 TIGRFAM: phage major tail protein, TP901-1 family; KEGG: mex:Mext_1425 phage major tail protein, TP901-1 family YP_001924124.1 KEGG: mex:Mext_1426 hypothetical protein YP_001924125.1 TIGRFAM: phage head-tail adaptor; KEGG: mex:Mext_1427 phage head-tail adaptor YP_001924126.1 KEGG: mex:Mext_1428 phiE125 gp8 family protein YP_001924127.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: mex:Mext_1429 peptidase S1 and S6 chymotrypsin/Hap YP_001924128.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: mex:Mext_1430 peptidase S1 and S6 chymotrypsin/Hap YP_001924129.1 TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: mex:Mext_1431 phage major capsid protein, HK97 family YP_001924130.1 TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: mex:Mext_1432 phage prohead protease, HK97 family YP_001924131.1 TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: mex:Mext_1433 phage portal protein, HK97 family YP_001924132.1 PFAM: protein of unknown function DUF264; KEGG: mex:Mext_1434 protein of unknown function DUF264 YP_001924134.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_1435 precorrin-3B C17-methyltransferase YP_001924135.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_1436 precorrin-2 C20-methyltransferase YP_001924136.1 PFAM: precorrin-8X methylmutase CbiC/CobH; KEGG: mex:Mext_1437 precorrin-8X methylmutase YP_001924137.1 TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: mex:Mext_1438 precorrin-3B synthase YP_001924138.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism YP_001924139.1 KEGG: mex:Mext_1440 hypothetical protein YP_001924140.1 TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_1441 cobalamin biosynthesis protein CobW YP_001924141.1 PFAM: protein of unknown function DUF1636; KEGG: mex:Mext_1442 protein of unknown function DUF1636 YP_001924142.1 TIGRFAM: cobalt transporter, subunit CbtA; PFAM: Cobalt transporter subunit CbtA KEGG: mex:Mext_1443 cobalt transporter, subunit CbtA YP_001924143.1 TIGRFAM: cobalt transporter, subunit CbtB; PFAM: Cobalt transporter subunit CbtB KEGG: mex:Mext_1444 cobalt transporter, subunit CbtB YP_001924144.1 PFAM: cobalbumin biosynthesis protein; KEGG: mex:Mext_1447 adenosylcobinamide-phosphate guanylyltransferase YP_001924145.1 KEGG: mex:Mext_1448 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_001924146.1 KEGG: lpc:LPC_1394 hypothetical protein YP_001924147.1 TIGRFAM: formaldehyde-activating enzyme; PFAM: formaldehyde-activating enzyme (Fae); KEGG: mex:Mext_1450 formaldehyde-activating enzyme YP_001924148.1 KEGG: mex:Mext_1451 hypothetical protein YP_001924149.1 KEGG: mex:Mext_1452 hypothetical protein YP_001924150.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_1453 alpha/beta hydrolase fold YP_001924151.1 KEGG: mex:Mext_1455 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001924152.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_4365 helix-turn-helix-domain containing protein AraC type YP_001924153.1 KEGG: mex:Mext_4366 hypothetical protein YP_001924154.1 KEGG: rle:RL2912 hypothetical protein YP_001924155.1 KEGG: mex:Mext_1456 hypothetical protein YP_001924156.1 TIGRFAM: conserved hypothetical hypothetical protein; KEGG: mex:Mext_1457 hypothetical protein YP_001924157.1 PFAM: protein of unknown function DUF58; KEGG: mex:Mext_1458 protein of unknown function DUF58 YP_001924158.1 PFAM: ATPase activities AAA_3; ATPase activities AAA_5; KEGG: mex:Mext_1459 ATPase activities AAA_3 YP_001924159.1 PFAM: thioesterase superfamily protein; KEGG: mex:Mext_1460 thioesterase superfamily protein YP_001924160.1 PFAM: protein of unknown function DUF1285; KEGG: mex:Mext_1461 protein of unknown function DUF1285 YP_001924161.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_1462 NUDIX hydrolase YP_001924162.1 KEGG: mex:Mext_1463 hypothetical protein YP_001924163.1 PFAM: polynucleotide adenylyltransferase; KEGG: mex:Mext_1464 polynucleotide adenylyltransferase YP_001924164.1 KEGG: xcv:XCVb0003 hypothetical protein YP_001924165.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane YP_001924167.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_001924168.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit YP_001924169.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_001924170.1 TIGRFAM: ATP synthase F1 subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: mex:Mext_1469 ATP synthase F1 subunit delta YP_001924171.1 KEGG: cak:Caul_1726 hypothetical protein YP_001924172.1 PFAM: ferrochelatase; KEGG: mex:Mext_1470 ferrochelatase YP_001924173.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_1471 methyltransferase type 11 YP_001924174.1 PFAM: metallophosphoesterase; 5'-nucleotidase; KEGG: mex:Mext_1472 5'-nucleotidase YP_001924175.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: mex:Mext_1473 uracil-DNA glycosylase superfamily YP_001924177.1 PFAM: response regulator receiver; KEGG: mex:Mext_3363 response regulator receiver YP_001924178.1 KEGG: mex:Mext_1476 hypothetical protein YP_001924179.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mex:Mext_1477 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001924180.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: mex:Mext_1478 preprotein translocase, SecA subunit YP_001924181.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_1479 GCN5-related N-acetyltransferase YP_001924182.1 PFAM: beta-lactamase; KEGG: mex:Mext_1480 beta-lactamase YP_001924183.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: mex:Mext_1481 4'-phosphopantetheinyl transferase YP_001924184.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_1482 NUDIX hydrolase YP_001924185.1 TIGRFAM: esterase, PHB depolymerase family; PFAM: phospholipase/carboxylesterase; KEGG: mex:Mext_1483 esterase, PHB depolymerase family YP_001924186.1 KEGG: mex:Mext_1484 transcriptional regulator, CopG family YP_001924187.1 KEGG: mex:Mext_1485 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease YP_001924188.1 PFAM: protein of unknown function UPF0150; KEGG: sit:TM1040_1684 protein of unknown function UPF0150 YP_001924189.1 KEGG: mex:Mext_1488 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_001924190.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: shikimate/quinate 5-dehydrogenase; shikimate dehydrogenase substrate binding domain protein; KEGG: mex:Mext_1489 shikimate 5-dehydrogenase YP_001924191.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mex:Mext_1490 cation diffusion facilitator family transporter YP_001924192.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: mex:Mext_1491 maf protein YP_001924193.1 KEGG: mex:Mext_1492 capsular polysaccharide biosynthesis protein-like protein YP_001924194.1 PFAM: protein of unknown function DUF299; KEGG: mex:Mext_1493 protein of unknown function DUF299 YP_001924195.1 KEGG: mex:Mext_1494 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_001924196.1 PFAM: NUDIX hydrolase; KEGG: ppf:Pput_1103 NUDIX hydrolase YP_001924197.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1495 hypothetical protein YP_001924198.1 KEGG: mex:Mext_1496 hypothetical protein YP_001924199.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors YP_001924200.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine YP_001924201.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: haloacid dehalogenase; KEGG: mex:Mext_1499 HAD-superfamily hydrolase, subfamily IIA YP_001924202.1 KEGG: mex:Mext_1500 regulatory protein TetR YP_001924203.1 Synthesizes thioester adducts of fatty acids enzymatically to the phosphopantetheine group of acyl carrier protein YP_001924204.1 KEGG: swi:Swit_4667 prevent-host-death family protein YP_001924205.1 PFAM: DSBA oxidoreductase; KEGG: mex:Mext_1504 DsbA oxidoreductase YP_001924206.1 PFAM: rubrerythrin; protein of unknown function DUF125 transmembrane; KEGG: mex:Mext_1505 rubrerythrin YP_001924207.1 KEGG: mex:Mext_1506 carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein YP_001924208.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: mex:Mext_1507 molybdopterin biosynthesis MoaE protein YP_001924209.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_1508 protein of unknown function UPF0118 YP_001924210.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate YP_001924211.1 PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: mex:Mext_1510 VWA containing CoxE family protein YP_001924212.1 KEGG: amr:AM1_4013 hypothetical protein YP_001924213.1 PFAM: ATPase activities AAA_5; KEGG: mex:Mext_1512 ATPase activities AAA_5 YP_001924214.1 KEGG: sma:SAV3459 hypothetical protein YP_001924215.1 PFAM: zinc finger SWIM domain protein; KEGG: mex:Mext_1514 zinc finger SWIM domain protein YP_001924216.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_001924217.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: mex:Mext_1518 uracil-DNA glycosylase superfamily YP_001924218.1 KEGG: mex:Mext_1519 hypothetical protein YP_001924219.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase YP_001924220.1 PFAM: protein of unknown function DUF1330; KEGG: mex:Mext_1521 protein of unknown function DUF1330 YP_001924221.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_1522 regulatory protein TetR YP_001924222.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bmu:Bmul_0907 short-chain dehydrogenase/reductase SDR YP_001924223.1 KEGG: mex:Mext_1523 hypothetical protein YP_001924224.1 KEGG: mex:Mext_1524 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase YP_001924225.1 KEGG: mex:Mext_1525 NUDIX hydrolase YP_001924226.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_1525 NUDIX hydrolase YP_001924227.1 PFAM: carbonic anhydrase; KEGG: mex:Mext_1526 carbonate dehydratase YP_001924228.1 KEGG: mex:Mext_1767 hypothetical protein YP_001924229.1 PFAM: acyltransferase 3; KEGG: mex:Mext_1766 acyltransferase 3 YP_001924230.1 PFAM: UspA domain protein; KEGG: mex:Mext_1765 UspA domain protein YP_001924231.1 KEGG: mex:Mext_1764 hypothetical protein YP_001924232.1 TIGRFAM: bacterioferritin; PFAM: rubrerythrin; Ferritin Dps family protein; KEGG: mex:Mext_1763 bacterioferritin YP_001924233.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A; KEGG: mex:Mext_1762 peptide methionine sulfoxide reductase YP_001924234.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: methionine sulfoxide reductase B; KEGG: mex:Mext_1761 methionine-R-sulfoxide reductase YP_001924235.1 KEGG: mex:Mext_1760 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold YP_001924236.1 TIGRFAM: methionine biosynthesis protein MetW; PFAM: methionine biosynthesis MetW protein; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_1759 methionine biosynthesis protein MetW YP_001924237.1 KEGG: mex:Mext_1758 hypothetical protein YP_001924238.1 PFAM: protein of unknown function DUF497; KEGG: mex:Mext_1757 protein of unknown function DUF497 YP_001924239.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mex:Mext_1756 phospholipid/glycerol acyltransferase YP_001924240.1 PFAM: aminoglycoside phosphotransferase; KEGG: mex:Mext_1755 aminoglycoside phosphotransferase YP_001924241.1 KEGG: mex:Mext_1754 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_001924242.1 KEGG: mex:Mext_1753 hypothetical protein YP_001924243.1 KEGG: mex:Mext_1752 hypothetical protein YP_001924244.1 KEGG: mex:Mext_1751 hypothetical protein YP_001924245.1 KEGG: mex:Mext_1750 hypothetical protein YP_001924246.1 PFAM: OmpW family protein; KEGG: mex:Mext_1749 OmpW family protein YP_001924247.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_1748 diguanylate cyclase YP_001924248.1 PFAM: EAL domain protein; KEGG: mex:Mext_1747 EAL domain protein YP_001924249.1 PFAM: protein of unknown function DUF808; KEGG: mex:Mext_1746 protein of unknown function DUF808 YP_001924250.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: mex:Mext_1178 cysteine desulfurase, SufS subfamily YP_001924251.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_1177 cyclic nucleotide-binding YP_001924252.1 KEGG: mex:Mext_1176 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein YP_001924253.1 KEGG: mex:Mext_1175 hypothetical protein YP_001924254.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: bbt:BBta_7152 adenylate/guanylyl cyclase with a CHASE2 domain YP_001924255.1 TIGRFAM: autotransporter-associated beta strand repeat protein; KEGG: azc:AZC_2635 hypothetical protein YP_001924257.1 PFAM: glycosyl transferase family 2; KEGG: mlo:mll0582 hypothetical protein YP_001924258.1 KEGG: bja:bll2411 hypothetical protein YP_001924260.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1158 LysR substrate-binding YP_001924261.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mex:Mext_1157 nitrilase YP_001924262.1 PFAM: protein of unknown function DUF485; KEGG: mex:Mext_1156 protein of unknown function DUF485 YP_001924263.1 KEGG: mex:Mext_1155 SSS sodium solute transporter superfamily YP_001924264.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_1041 helix-turn-helix domain protein YP_001924265.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: mex:Mext_2932 phosphoesterase PA-phosphatase related YP_001924266.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; hypothetical protein; KEGG: mex:Mext_3803 diguanylate cyclase YP_001924267.1 KEGG: mex:Mext_3588 hypothetical protein YP_001924268.1 KEGG: mex:Mext_3584 hypothetical protein YP_001924270.1 KEGG: mex:Mext_1660 hypothetical protein YP_001924271.1 TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region; KEGG: mex:Mext_1659 glutamine synthetase, type III YP_001924272.1 PFAM: dihydroorotate dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: mex:Mext_1658 ferredoxin-dependent glutamate synthase YP_001924273.1 PFAM: glutamate synthase alpha subunit domain protein; KEGG: mex:Mext_1657 glutamate synthase alpha subunit domain protein YP_001924274.1 PFAM: glutamine amidotransferase class-II; KEGG: mex:Mext_1656 glutamine amidotransferase class-II YP_001924275.1 PFAM: ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_1655 ThiJ/PfpI domain protein YP_001924276.1 TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: mex:Mext_1654 sarcosine oxidase, beta subunit family YP_001924277.1 PFAM: sarcosine oxidase subunit delta heterotetrameric; KEGG: mex:Mext_1653 sarcosine oxidase delta subunit heterotetrameric YP_001924278.1 TIGRFAM: sarcosine oxidase subunit alpha; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: mex:Mext_1652 sarcosine oxidase subunit alpha YP_001924279.1 PFAM: sarcosine oxidase subunit gamma; KEGG: mex:Mext_1651 sarcosine oxidase gamma subunit YP_001924280.1 KEGG: mex:Mext_1649 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001924281.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide YP_001924282.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: mex:Mext_1647 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_001924283.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_001924284.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: mex:Mext_1645 succinyl-CoA synthetase, alpha subunit YP_001924285.1 KEGG: mex:Mext_1644 succinyl-CoA synthetase, beta subunit; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein YP_001924286.1 TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase; KEGG: mex:Mext_1643 malate dehydrogenase, NAD-dependent YP_001924287.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_1642 regulatory protein TetR YP_001924288.1 PFAM: shikimate kinase; 3-dehydroquinate synthase; KEGG: mex:Mext_1641 shikimate kinase, 3-dehydroquinate synthase YP_001924289.1 TIGRFAM: addiction module antidote protein, HigA family; KEGG: rpc:RPC_4745 plasmid maintenance system antidote protein, XRE family YP_001924290.1 PFAM: plasmid maintenance system killer; KEGG: btr:Btr_0497 hypothetical protein YP_001924291.1 KEGG: mex:Mext_1640 radical SAM enzyme, Cfr family; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001924292.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP YP_001924293.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_001924294.1 KEGG: mex:Mext_1637 hypothetical protein YP_001924295.1 PFAM: FAD linked oxidase domain protein; KEGG: bbt:BBta_7179 hypothetical protein YP_001924296.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_CH03424 short chain dehydrogenase YP_001924297.1 KEGG: mex:Mext_1636 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_001924298.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: mex:Mext_1635 methionyl-tRNA formyltransferase YP_001924299.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_001924300.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica. YP_001924301.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: mex:Mext_1632 UBA/ThiF-type NAD/FAD binding protein YP_001924302.1 PFAM: SEC-C motif domain protein; KEGG: mex:Mext_1631 sec-C motif domain protein YP_001924303.1 KEGG: mex:Mext_1630 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit YP_001924304.1 KEGG: rpe:RPE_0494 hypothetical protein YP_001924305.1 KEGG: rpc:RPC_0446 hypothetical protein YP_001924306.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_001924307.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_001924308.1 PFAM: ribosomal protein L35; KEGG: mex:Mext_1627 ribosomal protein L35 YP_001924309.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1626 glycosyl transferase group 1 YP_001924310.1 PFAM: amylo-alpha-16-glucosidase; KEGG: mex:Mext_1625 amylo-alpha-16-glucosidase YP_001924311.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits YP_001924312.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1623 glycosyl transferase group 1 YP_001924313.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_1622 hypothetical protein YP_001924314.1 PFAM: protein of unknown function DUF1150; KEGG: mex:Mext_1621 protein of unknown function DUF1150 YP_001924315.1 PFAM: heat shock protein Hsp20; KEGG: mex:Mext_1620 heat shock protein HSP20 YP_001924316.1 KEGG: mex:Mext_1619 hypothetical protein YP_001924317.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mex:Mext_1618 MotA/TolQ/ExbB proton channel YP_001924318.1 TIGRFAM: protein TolR; PFAM: biopolymer transport protein ExbD/TolR; KEGG: mex:Mext_1617 protein TolR YP_001924319.1 TIGRFAM: TonB family protein; KEGG: mex:Mext_1616 TonB family protein YP_001924320.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_1615 metallophosphoesterase YP_001924321.1 KEGG: mex:Mext_1614 hypothetical protein YP_001924323.1 KEGG: mex:Mext_1613 hypothetical protein YP_001924324.1 PFAM: flagellar FlaF family protein; KEGG: mex:Mext_1612 flagellar FlaF family protein YP_001924325.1 KEGG: mex:Mext_1611 hypothetical protein YP_001924326.1 KEGG: bch:Bcen2424_5620 hypothetical protein YP_001924328.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_001924330.1 PFAM: Hly-III family protein; KEGG: mex:Mext_1608 Hly-III family protein YP_001924331.1 PFAM: cytochrome oxidase assembly; KEGG: mex:Mext_1607 cytochrome oxidase assembly YP_001924332.1 KEGG: mex:Mext_1606 hypothetical protein YP_001924333.1 KEGG: mex:Mext_1605 hypothetical protein YP_001924334.1 PFAM: polysaccharide deacetylase; KEGG: mex:Mext_1604 polysaccharide deacetylase YP_001924335.1 KEGG: mex:Mext_1603 conserved hypothetical protein; acyl-CoA N-acyltransferase related protein YP_001924336.1 KEGG: mex:Mext_1602 hypothetical protein YP_001924337.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity YP_001924338.1 KEGG: mex:Mext_1600 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_001924339.1 PFAM: regulatory protein ArsR; UbiE/COQ5 methyltransferase; methyltransferase small; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_1599 methyltransferase type 11 YP_001924340.1 PFAM: Patatin; KEGG: mex:Mext_1598 patatin YP_001924341.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_001924342.1 PFAM: K potassium transporter; KEGG: mex:Mext_1596 K potassium transporter YP_001924343.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1595 TonB-dependent siderophore receptor YP_001924344.1 KEGG: mex:Mext_1594 hypothetical protein YP_001924345.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_001924346.1 PFAM: prephenate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mex:Mext_1592 prephenate dehydrogenase YP_001924347.1 KEGG: mex:Mext_1591 hypothetical protein YP_001924348.1 KEGG: mex:Mext_1590 conserved hypothetical proteinn YP_001924349.1 KEGG: mex:Mext_1589 hypothetical protein YP_001924350.1 KEGG: mex:Mext_1588 hypothetical protein YP_001924351.1 required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA YP_001924352.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: mex:Mext_1586 ParB-like partition protein YP_001924353.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mex:Mext_1585 cobyrinic acid ac-diamide synthase YP_001924354.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: mex:Mext_1584 methyltransferase GidB YP_001924355.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_001924356.1 KEGG: mex:Mext_1582 hypothetical protein YP_001924357.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE YP_001924358.1 TIGRFAM: leucyl-tRNA synthetase; KEGG: mex:Mext_1579 leucyl-tRNA synthetase YP_001924359.1 PFAM: Protein of unknown function DUF1963; KEGG: azc:AZC_4071 hypothetical protein YP_001924360.1 PFAM: alanine racemase domain protein; KEGG: mex:Mext_1578 alanine racemase domain protein YP_001924361.1 KEGG: mex:Mext_1577 hypothetical protein YP_001924362.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_1576 response regulator receiver YP_001924363.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_1575 cyclic nucleotide-binding YP_001924364.1 KEGG: mex:Mext_1574 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_001924365.1 KEGG: mex:Mext_1572 helix-turn-helix domain protein YP_001924366.1 KEGG: mex:Mext_1571 hypothetical protein YP_001924367.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: mex:Mext_1570 acid phosphatase YP_001924368.1 KEGG: mex:Mext_1569 hypothetical protein YP_001924369.1 KEGG: mex:Mext_1568 hypothetical protein YP_001924370.1 similar to YegS from E. coli YP_001924371.1 PFAM: integral hypothetical protein TerC; KEGG: mex:Mext_1566 integral hypothetical protein TerC YP_001924372.1 KEGG: mex:Mext_1565 hypothetical protein YP_001924373.1 KEGG: ret:RHE_PF00468 ferric iron reductase protein YP_001924374.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sme:SMc01657 ferrichrome-iron receptor precursor protein YP_001924375.1 catalyzes the formation of acetate from pyruvate YP_001924376.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_001924377.1 PFAM: Smr protein/MutS2; KEGG: mex:Mext_1562 Smr protein/MutS2 YP_001924378.1 PFAM: MltA domain protein; 3D domain protein; KEGG: mex:Mext_1561 MltA domain protein YP_001924379.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: mex:Mext_1560 import inner membrane translocase subunit Tim44 YP_001924380.1 TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; KEGG: mex:Mext_1559 protein-export protein SecB YP_001924381.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1558 major facilitator superfamily MFS_1 YP_001924382.1 KEGG: mex:Mext_1557 hypothetical protein YP_001924383.1 TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: mex:Mext_1556 export-related chaperone CsaA YP_001924384.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_001924385.1 KEGG: mex:Mext_1554 hypothetical protein YP_001924386.1 KEGG: mex:Mext_1553 hypothetical protein YP_001924387.1 KEGG: mex:Mext_1552 protein of unknown function DUF1469 YP_001924388.1 KEGG: mex:Mext_1551 hypothetical protein YP_001924389.1 PFAM: glycosyl transferase family 20; KEGG: mex:Mext_1550 alpha,alpha-trehalose-phosphate synthase (UDP-forming) YP_001924390.1 KEGG: mex:Mext_1549 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001924391.1 KEGG: rpa:RPA2883 hypothetical protein YP_001924392.1 KEGG: mex:Mext_1547 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_001924393.1 PFAM: plasmid stabilization system; KEGG: rpb:RPB_1466 plasmid stabilization system YP_001924394.1 KEGG: xau:Xaut_3830 hypothetical protein YP_001924395.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_1546 NAD(P)H quinone oxidoreductase, PIG3 family YP_001924396.1 KEGG: mex:Mext_1545 hypothetical protein YP_001924397.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: mex:Mext_1544 3-hydroxybutyryl-CoA dehydrogenase YP_001924398.1 PFAM: electron transfer flavoprotein alpha/beta-subunit ; electron transfer flavoprotein alpha subunit; KEGG: mex:Mext_1543 electron transfer flavoprotein alpha subunit YP_001924399.1 PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: mex:Mext_1542 electron transfer flavoprotein alpha/beta-subunit YP_001924400.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: mex:Mext_1541 ATP--cobalamin adenosyltransferase YP_001924401.1 KEGG: mex:Mext_1540 hypothetical protein YP_001924402.1 KEGG: mex:Mext_1539 hypothetical protein YP_001924403.1 PFAM: hypoxia induced protein conserved region; KEGG: mex:Mext_1538 hypoxia induced protein conserved region YP_001924404.1 KEGG: mex:Mext_1537 hypothetical protein YP_001924405.1 KEGG: mex:Mext_1536 UV damage repair endonuclease YP_001924406.1 TIGRFAM: urea amidolyase; PFAM: allophanate hydrolase subunit 2; KEGG: mex:Mext_1535 UreA amidolyase related protein YP_001924407.1 PFAM: allophanate hydrolase subunit 1; KEGG: mex:Mext_1534 allophanate hydrolase subunit 1 YP_001924408.1 PFAM: MCP methyltransferase CheR-type; KEGG: mex:Mext_1533 protein-glutamate O-methyltransferase YP_001924409.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: mex:Mext_1532 protein-glutamate methylesterase YP_001924410.1 PFAM: response regulator receiver; KEGG: mex:Mext_1531 response regulator receiver YP_001924411.1 PFAM: CheW domain protein; KEGG: mex:Mext_1530 CheW domain protein YP_001924412.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: mex:Mext_1529 ATP-binding region ATPase domain protein YP_001924413.1 KEGG: mex:Mext_1528 hypothetical protein YP_001924414.1 PFAM: inositol monophosphatase; KEGG: mex:Mext_1527 inositol monophosphatase YP_001924415.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1791 hypothetical protein YP_001924416.1 KEGG: mex:Mext_1790 hypothetical protein YP_001924417.1 KEGG: mex:Mext_1789 hypothetical protein YP_001924418.1 KEGG: mex:Mext_1788 hypothetical protein YP_001924419.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mex:Mext_1787 diaminopimelate decarboxylase YP_001924420.1 PFAM: protein of unknown function DUF1234; KEGG: mex:Mext_1786 protein of unknown function DUF1234 YP_001924421.1 KEGG: mex:Mext_1785 hypothetical protein YP_001924422.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1784 hypothetical protein YP_001924423.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: mex:Mext_1783 protein of unknown function DUF463 YcjX family protein YP_001924424.1 PFAM: RES domain protein; KEGG: reh:H16_B1263 hypothetical hypothetical protein YP_001924425.1 KEGG: acr:Acry_3436 hypothetical protein YP_001924426.1 KEGG: mex:Mext_1782 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001924427.1 KEGG: mex:Mext_1781 hypothetical protein YP_001924428.1 KEGG: mex:Mext_1780 hypothetical protein YP_001924429.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_1778 cobalamin synthesis protein P47K YP_001924430.1 PFAM: protein of unknown function DUF86; KEGG: mmw:Mmwyl1_3032 protein of unknown function DUF86 YP_001924431.1 PFAM: DNA polymerase beta domain protein region; KEGG: rpe:RPE_4868 DNA polymerase, beta domain protein region YP_001924432.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_1777 regulatory protein TetR YP_001924433.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_1776 beta-lactamase domain protein YP_001924434.1 PFAM: Sulfur oxidation protein SoxZ; KEGG: mex:Mext_1775 sulphur oxidation protein SoxZ YP_001924435.1 KEGG: mex:Mext_1774 rhodanese YP_001924436.1 PFAM: thioredoxin; KEGG: mex:Mext_1773 thioredoxin domain YP_001924437.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_001924438.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif YP_001924439.1 KEGG: mex:Mext_1770 hypothetical protein YP_001924440.1 KEGG: mex:Mext_1769 hypothetical protein YP_001924441.1 PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_1768 radical SAM domain protein YP_001924442.1 PFAM: ribonuclease HII/HIII; KEGG: mex:Mext_1792 ribonuclease H YP_001924443.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1793 glycosyl transferase group 1 YP_001924444.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_1794 metallophosphoesterase YP_001924445.1 PFAM: aminotransferase class V; KEGG: mex:Mext_1795 serine--glyoxylate transaminase YP_001924446.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_1796 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_001924447.1 PFAM: methylene-tetrahydromethanopterin dehydrogenase; KEGG: mex:Mext_1797 methylenetetrahydrofolate dehydrogenase (NADP(+)) YP_001924448.1 PFAM: formiminotransferase-cyclodeaminase; KEGG: mex:Mext_1798 formiminotransferase-cyclodeaminase YP_001924449.1 catalyzes the formation of malyl-CoA from malate and CoA YP_001924450.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle YP_001924451.1 PFAM: phosphoenolpyruvate carboxylase; KEGG: mex:Mext_1801 phosphoenolpyruvate carboxylase YP_001924452.1 PFAM: HpcH/HpaI aldolase; KEGG: mex:Mext_1802 citrate (pro-3S)-lyase YP_001924453.1 PFAM: protein of unknown function DUF1003; KEGG: mex:Mext_1803 protein of unknown function DUF1003 YP_001924454.1 PFAM: dienelactone hydrolase; KEGG: mex:Mext_1804 carboxymethylenebutenolidase YP_001924455.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: mex:Mext_1805 transcriptional coactivator/pterin dehydratase YP_001924456.1 KEGG: mex:Mext_1806 ABC transporter periplasmic solute-binding protein YP_001924457.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_1807 binding-protein-dependent transport systems inner membrane component YP_001924458.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_1808 ABC transporter YP_001924459.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: pyrrolo-quinoline quinone; KEGG: mex:Mext_1809 PQQ-dependent dehydrogenase, methanol/ethanol family YP_001924460.1 KEGG: mex:Mext_1810 hypothetical protein YP_001924461.1 SMART: extracellular solute-binding protein family 3; KEGG: mex:Mext_1811 extracellular solute-binding protein family 3 YP_001924462.1 KEGG: mex:Mext_1812 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_001924463.1 TIGRFAM: dihydroneopterin aldolase; KEGG: mex:Mext_1813 dihydroneopterin aldolase YP_001924464.1 KEGG: mex:Mext_1814 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_001924465.1 KEGG: mex:Mext_1815 hypothetical protein YP_001924466.1 KEGG: mex:Mext_1816 hypothetical protein YP_001924467.1 TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: radical SAM domain protein; KEGG: mex:Mext_1817 coenzyme PQQ biosynthesis protein E YP_001924468.1 Required in the synthesis of PPQ, but its exact function is unknown YP_001924469.1 possibly involved in transport of pyrroloquinoline quinone transport YP_001924470.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_1821 response regulator receiver YP_001924471.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1822 ATP-binding region ATPase domain protein YP_001924472.1 KEGG: mex:Mext_1823 hypothetical protein YP_001924473.1 TIGRFAM: formylmethanofuran dehydrogenase subunit C; PFAM: glutamate synthase alpha subunit domain protein; KEGG: mex:Mext_1824 formylmethanofuran dehydrogenase subunit C YP_001924474.1 catalyzes the transfer of a formyl group from formylmethanofuran to tetrahydromethanopterin tetrahydromethanopterin YP_001924475.1 TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3; KEGG: mex:Mext_1826 formylmethanofuran dehydrogenase subunit A YP_001924476.1 KEGG: mex:Mext_1827 tungsten-containing formylmethanofuran dehydrogenase, subunit B YP_001924477.1 TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: mex:Mext_1828 beta-ribofuranosylaminobenzene 5'-phosphate synthase family YP_001924478.1 PFAM: methylene-tetrahydromethanopterin dehydrogenase; KEGG: mex:Mext_1829 methylene-tetrahydromethanopterin dehydrogenase YP_001924479.1 PFAM: protein of unknown function DUF201; KEGG: mex:Mext_1830 protein of unknown function DUF201 YP_001924480.1 catalyzes the reversible formation of methenyl-H(4)methanopterin from N(5)-formyl-H(4)methanopterin YP_001924481.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: mex:Mext_1832 alpha-L-glutamate ligase, RimK family YP_001924482.1 PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: mex:Mext_1833 triphosphoribosyl-dephospho-CoA protein YP_001924483.1 TIGRFAM: formaldehyde-activating enzyme; PFAM: formaldehyde-activating enzyme (Fae); KEGG: mex:Mext_1834 formaldehyde-activating enzyme YP_001924484.1 PFAM: histidine biosynthesis protein; KEGG: mex:Mext_1835 histidine biosynthesis protein YP_001924485.1 TIGRFAM: H4MPT-linked C1 transfer pathway protein; KEGG: mex:Mext_1836 H4MPT-linked C1 transfer pathway protein YP_001924486.1 KEGG: mex:Mext_1837 hypothetical protein YP_001924487.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mex:Mext_1838 40-residue YVTN family beta-propeller repeat protein YP_001924488.1 KEGG: mex:Mext_1839 conserved hypothetical protein; signal peptide YP_001924489.1 KEGG: mex:Mext_1840 exported protein of unknown function YP_001924490.1 KEGG: mex:Mext_1841 hypothetical protein YP_001924491.1 PFAM: dihydropteroate synthase DHPS; KEGG: mex:Mext_1842 dihydropteroate synthase DhpS YP_001924492.1 PFAM: aspartate/glutamate/uridylate kinase; KEGG: mex:Mext_1843 aspartate/glutamate/uridylate kinase YP_001924493.1 KEGG: mex:Mext_1844 hypothetical protein YP_001924494.1 KEGG: mex:Mext_1845 hypothetical protein YP_001924495.1 KEGG: mex:Mext_1846 exported protein of unknown function YP_001924496.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mex:Mext_1847 40-residue YVTN family beta-propeller repeat protein YP_001924497.1 KEGG: mex:Mext_1848 hypothetical protein YP_001924498.1 KEGG: mex:Mext_1849 hypothetical protein YP_001924499.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_1850 ABC transporter YP_001924500.1 PFAM: ABC transporter; KEGG: mex:Mext_1851 ABC transporter YP_001924501.1 KEGG: mex:Mext_1852 hypothetical protein YP_001924502.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1853 TonB-dependent receptor YP_001924503.1 SMART: Calcium-binding EF-hand-containing protein; KEGG: mex:Mext_1854 hypothetical protein YP_001924504.1 KEGG: mex:Mext_1855 hypothetical protein YP_001924505.1 TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: mex:Mext_1856 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_001924506.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1857 glycosyl transferase group 1 YP_001924507.1 PFAM: polysaccharide export protein; KEGG: mex:Mext_1858 polysaccharide export protein YP_001924508.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: mex:Mext_1859 lipopolysaccharide biosynthesis protein YP_001924509.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1860 hypothetical protein YP_001924510.1 KEGG: mex:Mext_1861 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: ATPase AAA; SMART: AAA ATPase YP_001924511.1 KEGG: mex:Mext_1862 hypothetical protein YP_001924512.1 KEGG: mex:Mext_1863 hypothetical protein YP_001924513.1 KEGG: bja:bll0661 hypothetical protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase activities AAA_5; SMART: AAA ATPase YP_001924514.1 PFAM: domain of unknown function DUF1745; KEGG: mex:Mext_1925 domain of unknown function DUF1745 YP_001924515.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1926 ATP-binding region ATPase domain protein YP_001924516.1 KEGG: mex:Mext_1927 hypothetical protein YP_001924517.1 PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: mex:Mext_1928 transglutaminase family protein cysteine peptidase BTLCP YP_001924518.1 PFAM: thioesterase superfamily protein; KEGG: mex:Mext_1929 thioesterase superfamily protein YP_001924519.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: mex:Mext_1930 alpha/beta hydrolase fold-3 domain protein YP_001924520.1 PFAM: sporulation domain protein; lytic transglycosylase; KEGG: mex:Mext_1931 lytic transglycosylase catalytic YP_001924521.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mex:Mext_1932 molybdopterin oxidoreductase YP_001924522.1 PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_1933 ABC transporter YP_001924523.1 KEGG: mex:Mext_1934 phosphopentomutase; TIGRFAM: phosphopentomutase; PFAM: metalloenzyme domain protein; phosphopentomutase domain protein YP_001924524.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence YP_001924525.1 KEGG: mex:Mext_1936 hypothetical protein YP_001924526.1 PFAM: DNA/RNA non-specific endonuclease; KEGG: mex:Mext_1937 DNA/RNA non-specific endonuclease YP_001924527.1 KEGG: mex:Mext_1938 hypothetical protein YP_001924528.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_001924529.1 TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_1940 hopanoid-associated sugar epimerase YP_001924530.1 TIGRFAM: squalene synthase HpnC; PFAM: squalene/phytoene synthase; KEGG: mex:Mext_1941 squalene synthase HpnC YP_001924531.1 TIGRFAM: squalene synthase HpnD; PFAM: squalene/phytoene synthase; KEGG: mex:Mext_1942 squalene synthase HpnD YP_001924532.1 TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_1943 squalene-associated FAD-dependent desaturase YP_001924533.1 KEGG: mex:Mext_1944 squalene-hopene cyclase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase YP_001924534.1 KEGG: mex:Mext_1945 hypothetical protein YP_001924535.1 PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: mex:Mext_1946 8-amino-7-oxononanoate synthase YP_001924536.1 PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KR domain protein; beta-ketoacyl synthase ; acyl transferase; KEGG: mex:Mext_1947 beta-ketoacyl synthase YP_001924537.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: mex:Mext_1948 nucleotide sugar dehydrogenase YP_001924538.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1949 glycosyl transferase family 2 YP_001924539.1 KEGG: mex:Mext_1950 hypothetical protein YP_001924542.1 PFAM: domain of unknown function DUF1738; KEGG: mex:Mext_3581 domain of unknown function DUF1738 YP_001924544.1 TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: rsp:RSP_3762 patch repair protein YP_001924545.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: rsp:RSP_3758 cytosine-specific DNA methylase YP_001924546.1 KEGG: xoo:XOO0608 endonuclease YP_001924547.1 PFAM: methyltransferase small; KEGG: rpb:RPB_0521 hypothetical protein YP_001924549.1 KEGG: ajs:Ajs_2206 hypothetical protein YP_001924551.1 KEGG: syw:SYNW2346 ATP-dependent Clp protease, HSP 100, ATP-binding subunit ClpB YP_001924552.1 KEGG: kra:Krad_0233 anti-sigma regulatory factor, serine/threonine protein kinase YP_001924554.1 KEGG: rpb:RPB_3050 hypothetical protein YP_001924555.1 KEGG: mjl:Mjls_3064 prolipoprotein diacylglyceryl transferase YP_001924556.1 KEGG: sma:SAV847 non-ribosomal peptide synthetase YP_001924557.1 KEGG: bvi:Bcep1808_7585 hypothetical protein YP_001924562.1 PFAM: BRO domain protein; KEGG: mca:MCA2642 hypothetical protein YP_001924571.1 KEGG: rfr:Rfer_2762 protein tyrosine phosphatase, receptor type, F-like YP_001924573.1 PFAM: glycoside hydrolase family 24; KEGG: mag:amb1525 phage-related lysozyme YP_001924576.1 KEGG: xau:Xaut_3728 hypothetical protein YP_001924579.1 KEGG: pde:Pden_1227 hypothetical protein YP_001924581.1 PFAM: protein of unknown function DUF156; KEGG: bbt:BBta_3410 hypothetical protein YP_001924582.1 PFAM: major facilitator superfamily MFS_1; KEGG: smd:Smed_5611 major facilitator superfamily MFS_1 YP_001924583.1 KEGG: mex:Mext_1861 DNA polymerase III, subunits gamma and tau YP_001924584.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: mex:Mext_2832 efflux transporter, RND family, MFP subunit YP_001924585.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: xau:Xaut_3406 heavy metal efflux pump, CzcA family YP_001924586.1 KEGG: xau:Xaut_0613 hypothetical protein YP_001924587.1 PFAM: protein of unknown function DUF1289; KEGG: vha:VIBHAR_06026 hypothetical protein YP_001924588.1 SMART: Rhodanese domain protein; KEGG: mex:Mext_1474 rhodanese domain protein YP_001924589.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: mex:Mext_1475 chromate transporter, chromate ion transporter (CHR) family YP_001924590.1 KEGG: sus:acid_6894 hypothetical protein YP_001924591.1 KEGG: rme:Rmet_6198 hypothetical protein YP_001924592.1 PFAM: protein of unknown function LppY and LpqO; KEGG: aba:acid345_3442 protein of unknown function LppY and LpqO YP_001924593.1 KEGG: bja:blr8069 hypothetical protein YP_001924594.1 KEGG: mex:Mext_1918 hypothetical protein YP_001924595.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: pde:Pden_0261 D12 class N6 adenine-specific DNA methyltransferase YP_001924596.1 KEGG: tfu:Tfu_0655 chromosome segregation protein SMC YP_001924603.1 PFAM: integrase family protein; KEGG: mlo:mll8495 integrase YP_001924604.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1951 major facilitator superfamily MFS_1 YP_001924605.1 PFAM: ethanolamine ammonia lyase large subunit; KEGG: mex:Mext_1952 ethanolamine ammonia lyase large subunit YP_001924606.1 PFAM: ethanolamine ammonia-lyase light chain; KEGG: mex:Mext_1953 ethanolamine ammonia-lyase YP_001924607.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_001924608.1 KEGG: mex:Mext_1955 Sel1 domain protein repeat-containing protein YP_001924609.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_1956 exodeoxyribonuclease III Xth YP_001924610.1 KEGG: mex:Mext_1957 hypothetical protein YP_001924611.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_1958 AMP-dependent synthetase and ligase YP_001924612.1 PFAM: protein of unknown function DUF465; KEGG: mex:Mext_1959 protein of unknown function DUF465 YP_001924613.1 PFAM: protein of unknown function DUF465; KEGG: mex:Mext_1960 protein of unknown function DUF465 YP_001924614.1 KEGG: mex:Mext_1961 hypothetical protein YP_001924615.1 KEGG: mex:Mext_1962 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_001924616.1 KEGG: mex:Mext_1963 phosphoribosylaminoimidazole carboxylase, ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_001924617.1 PFAM: TPR repeat-containing protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_1964 tetratricopeptide TPR_2 repeat protein YP_001924618.1 PFAM: response regulator receiver; KEGG: mex:Mext_1965 response regulator receiver YP_001924619.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese YP_001924620.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine YP_001924621.1 KEGG: mex:Mext_1968 hypothetical protein YP_001924622.1 KEGG: mex:Mext_1969 hypothetical protein YP_001924623.1 KEGG: mex:Mext_1970 hypothetical protein YP_001924624.1 PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: mex:Mext_1971 Na+ dependent nucleoside transporter domain protein YP_001924625.1 KEGG: mex:Mext_1972 hypothetical protein YP_001924626.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1973 glycosyl transferase group 1 YP_001924627.1 KEGG: mex:Mext_1974 DNA topoisomerase I YP_001924628.1 PFAM: chemotaxis sensory transducer; KEGG: mex:Mext_1975 chemotaxis sensory transducer YP_001924629.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: mex:Mext_1976 cytochrome bd ubiquinol oxidase subunit I YP_001924630.1 PFAM: regulatory protein LuxR; KEGG: mex:Mext_1977 regulatory protein LuxR YP_001924631.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: mex:Mext_1978 diguanylate cyclase YP_001924632.1 KEGG: mex:Mext_1979 hypothetical protein YP_001924633.1 KEGG: mex:Mext_1980 hypothetical protein YP_001924634.1 PFAM: iron permease FTR1; KEGG: mex:Mext_1981 iron permease FTR1 YP_001924635.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mex:Mext_1982 low molecular weight phosphotyrosine protein phosphatase YP_001924636.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1983 hypothetical protein YP_001924637.1 PFAM: histidinol dehydrogenase; KEGG: mex:Mext_1984 histidinol dehydrogenase YP_001924638.1 KEGG: mex:Mext_1985 hypothetical protein YP_001924639.1 KEGG: mex:Mext_1986 hypothetical protein YP_001924640.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_001924641.1 KEGG: gdi:GDI1444 hypothetical protein YP_001924642.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine YP_001924643.1 KEGG: mbb:BCG_3106 hypothetical protein YP_001924644.1 KEGG: mex:Mext_1991 hypothetical protein YP_001924645.1 KEGG: mex:Mext_1992 hypothetical protein YP_001924646.1 PFAM: PhnA protein; KEGG: mex:Mext_1993 PhnA protein YP_001924647.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_1994 beta-lactamase domain protein YP_001924648.1 KEGG: mex:Mext_1996 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II YP_001924649.1 KEGG: mex:Mext_1998 hypothetical protein YP_001924650.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: mex:Mext_1999 domain of unknown function DUF1732 YP_001924651.1 Essential for recycling GMP and indirectly, cGMP YP_001924652.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_2001 ABC transporter YP_001924653.1 PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_5357 siderophore transporter, RhtX/FptX family YP_001924654.1 KEGG: rpc:RPC_0476 hypothetical protein YP_001924655.1 PFAM: response regulator receiver; KEGG: mxa:MXAN_0460 response regulator YP_001924656.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2002 ErfK/YbiS/YcfS/YnhG family protein YP_001924657.1 KEGG: mex:Mext_2003 cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase YP_001924658.1 KEGG: mex:Mext_2004 hypothetical protein YP_001924659.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2005 TonB-dependent siderophore receptor YP_001924660.1 KEGG: mex:Mext_2006 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase YP_001924661.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate YP_001924662.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_4855 GntR domain protein YP_001924663.1 KEGG: mex:Mext_4854 hypothetical protein YP_001924664.1 PFAM: extracellular ligand-binding receptor; KEGG: mex:Mext_4853 extracellular ligand-binding receptor YP_001924665.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_4852 inner-membrane translocator YP_001924666.1 PFAM: inner-membrane translocator; ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_4851 ABC transporter YP_001924667.1 PFAM: polysaccharide deacetylase; KEGG: mex:Mext_4850 polysaccharide deacetylase YP_001924668.1 KEGG: mex:Mext_4849 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_001924669.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers YP_001924670.1 PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_2010 carbohydrate-selective porin OprB YP_001924671.1 KEGG: mex:Mext_2011 hypothetical protein YP_001924672.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate YP_001924673.1 KEGG: mex:Mext_2013 hypothetical protein YP_001924674.1 PFAM: peptidase M48 Ste24p; KEGG: mex:Mext_2014 peptidase M48 Ste24p YP_001924675.1 KEGG: mex:Mext_2015 hypothetical protein YP_001924676.1 PFAM: protein of unknown function DUF466; KEGG: mex:Mext_2016 protein of unknown function DUF466 YP_001924677.1 PFAM: carbon starvation protein CstA; KEGG: mex:Mext_2017 carbon starvation protein CstA YP_001924678.1 PFAM: protein of unknown function DUF477; KEGG: mex:Mext_2018 protein of unknown function DUF477 YP_001924679.1 PFAM: protein of unknown function DUF477; KEGG: mex:Mext_2019 protein of unknown function DUF477 YP_001924680.1 PFAM: LemA family protein; KEGG: mex:Mext_2020 LemA family protein YP_001924681.1 TIGRFAM: conserved hypothetical selenoprotein; PFAM: Selenoprotein W-related; KEGG: mex:Mext_2021 conserved hypothetical selenoprotein YP_001924682.1 KEGG: mex:Mext_2022 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001924683.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_2023 2,5-didehydrogluconate reductase YP_001924684.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_2024 cyclic nucleotide-binding YP_001924685.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose YP_001924686.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rpe:RPE_4865 alpha amylase, catalytic region YP_001924687.1 KEGG: mex:Mext_2028 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_001924688.1 KEGG: mex:Mext_2029 hypothetical protein YP_001924689.1 KEGG: mex:Mext_2030 ferredoxin-NAD reductase component YP_001924690.1 KEGG: mex:Mext_2031 hypothetical protein YP_001924691.1 KEGG: mex:Mext_2032 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein YP_001924692.1 PFAM: glycosyl transferase family 4; KEGG: mex:Mext_2033 glycosyl transferase family 4 YP_001924693.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KR domain protein; KEGG: mex:Mext_2034 NAD-dependent epimerase/dehydratase YP_001924694.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: mex:Mext_2035 NAD(P)H dehydrogenase (quinone) YP_001924695.1 PFAM: helix-turn-helix HxlR type; KEGG: mex:Mext_2036 helix-turn-helix HxlR type YP_001924696.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KR domain protein; KEGG: mex:Mext_2037 polysaccharide biosynthesis protein CapD YP_001924697.1 PFAM: protein of unknown function DUF1206; KEGG: mex:Mext_2038 protein of unknown function DUF1206 YP_001924698.1 KEGG: mex:Mext_2039 hypothetical protein YP_001924699.1 PFAM: protein of unknown function DUF820; KEGG: mex:Mext_2040 protein of unknown function DUF820 YP_001924700.1 PFAM: protein of unknown function DUF820; KEGG: mex:Mext_2041 protein of unknown function DUF820 YP_001924701.1 PFAM: homospermidine synthase; KEGG: mex:Mext_2042 homospermidine synthase YP_001924702.1 KEGG: mex:Mext_2043 hypothetical protein YP_001924703.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2044 GCN5-related N-acetyltransferase YP_001924704.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mex:Mext_2045 Orn/DAP/Arg decarboxylase 2 YP_001924705.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan YP_001924706.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2047 GCN5-related N-acetyltransferase YP_001924707.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mex:Mext_2048 NADH:flavin oxidoreductase/NADH oxidase YP_001924708.1 PFAM: haloacid dehalogenase; KEGG: mex:Mext_2049 HAD-superfamily hydrolase, subfamily IA, variant 1 YP_001924709.1 PFAM: SmpA/OmlA domain protein; KEGG: mex:Mext_2050 SmpA/OmlA domain protein YP_001924710.1 PFAM: Ubiquinol-cytochrome C chaperone; KEGG: mex:Mext_2051 ubiquinol-cytochrome c chaperone YP_001924711.1 KEGG: mex:Mext_2052 hypothetical protein YP_001924712.1 TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: mex:Mext_2053 fatty acid/phospholipid synthesis protein PlsX YP_001924713.1 KEGG: mex:Mext_2054 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_001924714.1 PFAM: histone family protein DNA-binding protein; KEGG: mex:Mext_2055 histone family protein DNA-binding protein YP_001924715.1 PFAM: regulatory protein MerR; KEGG: mex:Mext_2056 regulatory protein MerR YP_001924716.1 KEGG: mex:Mext_2057 hypothetical protein YP_001924717.1 KEGG: mex:Mext_2058 hypothetical protein YP_001924718.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: mex:Mext_2059 PrkA AAA domain protein YP_001924719.1 PFAM: protein of unknown function DUF444; KEGG: mex:Mext_2060 protein of unknown function DUF444 YP_001924720.1 PFAM: SpoVR family protein; KEGG: mex:Mext_2061 SpoVR family protein YP_001924721.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: mex:Mext_2062 phosphoribosylglycinamide formyltransferase YP_001924722.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_001924723.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_2065 protein of unknown function UPF0118 YP_001924724.1 KEGG: mex:Mext_2066 chromosomal replication initiator DnaA YP_001924725.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate YP_001924726.1 PFAM: Ppx/GppA phosphatase; KEGG: mex:Mext_2068 Ppx/GppA phosphatase YP_001924727.1 KEGG: mex:Mext_2069 hypothetical protein YP_001924728.1 PFAM: aminotransferase class I and II; KEGG: mex:Mext_2070 aminotransferase class I and II YP_001924729.1 PFAM: coenzyme A transferase; KEGG: mex:Mext_2071 coenzyme A transferase YP_001924730.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_2072 chemotaxis sensory transducer YP_001924731.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_001924732.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_001924733.1 TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: mex:Mext_2075 uridylate kinase YP_001924734.1 catalyzes the hydrolysis of pyrophosphate to phosphate YP_001924735.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2077 GCN5-related N-acetyltransferase YP_001924736.1 KEGG: mex:Mext_2078 hypothetical protein YP_001924737.1 KEGG: mex:Mext_2079 hypothetical protein YP_001924738.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis YP_001924739.1 TIGRFAM: outer hypothetical protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: mex:Mext_2081 outer hypothetical protein assembly complex, YaeT protein YP_001924740.1 KEGG: mex:Mext_2082 membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein YP_001924741.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_001924742.1 PFAM: phosphatidate cytidylyltransferase; KEGG: mex:Mext_2084 phosphatidate cytidylyltransferase YP_001924743.1 KEGG: mex:Mext_2085 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_001924744.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_001924745.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_2285 chemotaxis sensory transducer YP_001924746.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mex:Mext_2088 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_001924747.1 KEGG: mex:Mext_2097 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase YP_001924748.1 PFAM: nitrogen regulatory protein P-II; KEGG: mex:Mext_2098 nitrogen regulatory protein P-II YP_001924749.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mex:Mext_2099 ammonium transporter YP_001924750.1 KEGG: mex:Mext_2100 hypothetical protein YP_001924751.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: mex:Mext_2101 cell divisionFtsK/SpoIIIE YP_001924752.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2102 TonB-dependent receptor plug YP_001924753.1 KEGG: mex:Mext_2103 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein YP_001924754.1 KEGG: mex:Mext_2104 hypothetical protein YP_001924755.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mex:Mext_2105 oxidoreductase alpha (molybdopterin) subunit YP_001924756.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_001924757.1 PFAM: protein of unknown function DUF952; KEGG: mex:Mext_2107 protein of unknown function DUF952 YP_001924758.1 PFAM: peptidase S24 and S26 domain protein; KEGG: mex:Mext_2108 peptidase S24 and S26 domain protein YP_001924759.1 KEGG: mex:Mext_2109 hypothetical protein YP_001924760.1 KEGG: mex:Mext_2110 hypothetical protein YP_001924761.1 KEGG: mex:Mext_2111 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein YP_001924762.1 consists of N-terminal helix-turn-helix domain and C-terminal shikimate kinase-like domain which may bind benzoyl-CoA; controls inducible expression of the bzd catabolic operon that is involved in the anaerobic catabolism of benzoate YP_001924763.1 PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_2056 periplasmic dipeptide transport protein precursor YP_001924764.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_2113 ATP-binding region ATPase domain protein YP_001924765.1 KEGG: mex:Mext_2114 hypothetical protein YP_001924766.1 KEGG: mex:Mext_2115 hypothetical protein YP_001924767.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_2116 response regulator receiver YP_001924768.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_2117 histidine kinase YP_001924769.1 PFAM: response regulator receiver; KEGG: rpa:RPA4010 response regulator receiver (CheY-like protein) YP_001924770.1 PFAM: GAF domain protein; HWE histidine kinase; PAS fold-4 domain protein; KEGG: rpa:RPA4009 signal transduction histidine kinase with GAF domain YP_001924771.1 KEGG: mex:Mext_2120 cyclic nucleotide-binding YP_001924772.1 PFAM: PepSY-associated TM helix domain protein; KEGG: mex:Mext_2121 PepSY-associated TM helix domain protein YP_001924773.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2122 TonB-dependent siderophore receptor YP_001924774.1 KEGG: bra:BRADO2766 hypothetical protein YP_001924775.1 KEGG: mex:Mext_2123 hypothetical protein YP_001924776.1 PFAM: oxidoreductase molybdopterin binding; KEGG: mex:Mext_2124 oxidoreductase molybdopterin binding YP_001924777.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: mex:Mext_2125 oxidoreductase FAD-binding domain protein YP_001924779.1 KEGG: ret:RHE_CH00044 hypothetical protein YP_001924780.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_2126 hypothetical protein YP_001924782.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_001924783.1 KEGG: mex:Mext_2129 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region YP_001924784.1 PFAM: protein of unknown function DUF167; KEGG: mex:Mext_2130 protein of unknown function DUF167 YP_001924785.1 KEGG: pen:PSEEN2310 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001924786.1 KEGG: mex:Mext_2131 hypothetical protein YP_001924787.1 PFAM: glycosyl transferase family 28; KEGG: mex:Mext_2132 glycosyl transferase family 28 YP_001924788.1 KEGG: pst:PSPTO_0931 hypothetical protein YP_001924789.1 KEGG: pst:PSPTO_0930 hypothetical protein YP_001924790.1 PFAM: creatininase; KEGG: mex:Mext_2133 creatininase YP_001924791.1 KEGG: mex:Mext_2134 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001924792.1 KEGG: mex:Mext_2135 hypothetical protein YP_001924793.1 PFAM: CsbD family protein; KEGG: mex:Mext_2136 CsbD family protein YP_001924794.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_2137 major facilitator superfamily MFS_1 YP_001924795.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mex:Mext_2138 fumarylacetoacetate (FAA) hydrolase YP_001924796.1 KEGG: mex:Mext_2139 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein YP_001924797.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_2140 AMP-dependent synthetase and ligase YP_001924798.1 KEGG: mex:Mext_2141 hypothetical protein YP_001924799.1 KEGG: mex:Mext_2142 hypothetical protein YP_001924800.1 KEGG: mex:Mext_2143 hypothetical protein YP_001924801.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_2144 major facilitator superfamily MFS_1 YP_001924802.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_2145 LysR substrate-binding YP_001924803.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: mex:Mext_2146 4-oxalocrotonate tautomerase YP_001924804.1 PFAM: HpcH/HpaI aldolase; KEGG: mex:Mext_2147 citrate (pro-3S)-lyase YP_001924805.1 KEGG: mex:Mext_2148 hypothetical protein YP_001924806.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: mex:Mext_2149 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_001924807.1 KEGG: mex:Mext_2150 hypothetical protein YP_001924808.1 KEGG: mex:Mext_2151 hypothetical protein YP_001924809.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_2152 LysR substrate-binding YP_001924810.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_2153 glyoxalase/bleomycin resistance protein/dioxygenase YP_001924811.1 PFAM: phospholipase/carboxylesterase; KEGG: mex:Mext_2154 phospholipase/carboxylesterase YP_001924812.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: acr:Acry_0978 transcriptional regulator, MarR family YP_001924813.1 KEGG: mex:Mext_2155 hypothetical protein YP_001924814.1 KEGG: mex:Mext_2156 conserved hypothetical proteinn YP_001924815.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_001924816.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_001924817.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_001924818.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_001924819.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_001924820.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_001924821.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_001924822.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_001924823.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_001924824.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_001924825.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_001924826.1 KEGG: mex:Mext_2168 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; ribosomal protein S3 domain; SMART: KH domain protein YP_001924827.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_001924828.1 PFAM: ribosomal protein L29; KEGG: mex:Mext_2170 ribosomal protein L29 YP_001924829.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_001924830.1 PFAM: ATPase AAA; SMART: AAA ATPase; KEGG: mex:Mext_2172 ATPase AAA YP_001924831.1 KEGG: nwi:Nwi_2535 hypothetical protein YP_001924832.1 PFAM: TadE family protein; KEGG: mlo:mll7596 hypothetical protein YP_001924833.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_2173 NUDIX hydrolase YP_001924834.1 PFAM: regulatory protein MarR; transcriptional regulator PadR family protein; KEGG: mex:Mext_2174 regulatory protein MarR YP_001924835.1 is a component of the macrolide binding site in the peptidyl transferase center YP_001924836.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_001924837.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_2177 beta-lactamase domain protein YP_001924838.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_001924839.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_001924840.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_001924841.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: mex:Mext_2181 preprotein translocase, SecY subunit YP_001924842.1 late assembly protein YP_001924843.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_001924844.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_001924845.1 binds 5S rRNA along with protein L5 and L25 YP_001924846.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_001924847.1 PFAM: ribosomal protein S8; KEGG: mex:Mext_2187 ribosomal protein S8 YP_001924848.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif YP_001924849.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_001924850.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_001924851.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_001924852.1 KEGG: mex:Mext_2192 hypothetical protein YP_001924853.1 PFAM: nuclease (SNase domain protein); KEGG: mex:Mext_2193 nuclease (SNase domain protein) YP_001924854.1 KEGG: mex:Mext_2194 hypothetical protein YP_001924855.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_2195 diguanylate cyclase YP_001924856.1 KEGG: mex:Mext_2196 hypothetical protein YP_001924857.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mex:Mext_2203 monooxygenase FAD-binding YP_001924858.1 KEGG: mex:Mext_2204 hypothetical protein YP_001924859.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: mex:Mext_2206 methionine aminopeptidase, type I YP_001924860.1 PFAM: DNA repair protein RadC; KEGG: mex:Mext_2207 DNA repair protein RadC YP_001924861.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mex:Mext_2208 protein of unknown function DUF404 YP_001924862.1 PFAM: protein of unknown function DUF403; KEGG: mex:Mext_2209 protein of unknown function DUF403 YP_001924863.1 PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_1159 general substrate transporter YP_001924864.1 KEGG: mex:Mext_2210 hypothetical protein YP_001924865.1 KEGG: mex:Mext_2211 hypothetical protein YP_001924866.1 KEGG: mmu:665748 predicted gene, EG665748 YP_001924867.1 KEGG: sme:SMb21032 hypothetical proline-rich protein YP_001924868.1 PFAM: transglutaminase; transglutaminase; KEGG: mex:Mext_2214 transglutaminase YP_001924869.1 PFAM: 20S proteasome A and B subunits; KEGG: mex:Mext_2215 proteasome-type protease YP_001924870.1 PFAM: Silent information regulator protein Sir2; KEGG: mex:Mext_2216 silent information regulator protein Sir2 YP_001924871.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: mex:Mext_2217 CBS domain containing protein YP_001924872.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_2218 glycosyl transferase family 2 YP_001924873.1 KEGG: mex:Mext_2219 hypothetical protein YP_001924874.1 KEGG: mex:Mext_2220 hypothetical protein YP_001924875.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dol:Dole_2380 diguanylate cyclase YP_001924876.1 KEGG: mex:Mext_2221 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_001924877.1 KEGG: mex:Mext_2222 hypothetical protein YP_001924878.1 TIGRFAM: phasin; KEGG: mex:Mext_2223 phasin YP_001924879.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_2224 glycosyl transferase group 1 YP_001924880.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_2225 glycosyl transferase group 1 YP_001924881.1 KEGG: mex:Mext_2226 hypothetical protein YP_001924882.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_2227 diguanylate cyclase YP_001924883.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_2228 acyl-CoA dehydrogenase domain protein YP_001924884.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_2229 protein of unknown function DUF6 transmembrane YP_001924885.1 PFAM: ribonuclease BN; KEGG: mex:Mext_2230 ribonuclease BN YP_001924886.1 KEGG: mex:Mext_2231 hypothetical protein YP_001924887.1 KEGG: mex:Mext_2232 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_001924888.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_001924889.1 KEGG: mex:Mext_2234 adenylylsulfate reductase, thioredoxin dependent; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase YP_001924890.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: mex:Mext_2235 regulatory protein AsnC/Lrp family YP_001924891.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: mex:Mext_2236 flavodoxin/nitric oxide synthase YP_001924892.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide YP_001924893.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_001924894.1 KEGG: mex:Mext_2241 hypothetical protein YP_001924895.1 PFAM: helix-turn-helix domain protein; cupin; KEGG: mex:Mext_2242 helix-turn-helix domain protein YP_001924896.1 KEGG: oan:Oant_0601 hypothetical protein YP_001924897.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mex:Mext_2243 single-strand binding protein YP_001924898.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; KEGG: mex:Mext_2244 alcohol dehydrogenase zinc-binding domain protein YP_001924899.1 KEGG: mex:Mext_2245 conserved hypothetical protein; secreted protein YP_001924900.1 KEGG: mex:Mext_2246 hypothetical protein YP_001924901.1 KEGG: mex:Mext_2247 hypothetical protein YP_001924902.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mex:Mext_2248 NADH:flavin oxidoreductase/NADH oxidase YP_001924903.1 KEGG: mex:Mext_2249 glutathione S-transferase domain YP_001924904.1 KEGG: mex:Mext_2250 hypothetical protein YP_001924905.1 PFAM: thioredoxin; KEGG: mex:Mext_2251 thioredoxin domain YP_001924906.1 PFAM: peptidase S16 lon domain protein; KEGG: mex:Mext_2252 peptidase S16 lon domain protein YP_001924907.1 PFAM: protein of unknown function DUF343; KEGG: mex:Mext_2253 protein of unknown function DUF343 YP_001924908.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: mex:Mext_2254 import inner membrane translocase subunit Tim44 YP_001924909.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_2255 PAS sensor protein YP_001924910.1 PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: mex:Mext_2256 transglutaminase family protein cysteine peptidase BTLCP YP_001924911.1 PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: mex:Mext_2257 transglutaminase family protein cysteine peptidase BTLCP YP_001924912.1 PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_2258 type IV pilus assembly PilZ YP_001924913.1 PFAM: protein of unknown function DUF1457; KEGG: mex:Mext_2259 protein of unknown function DUF1457 YP_001924914.1 PFAM: Rhomboid family protein; KEGG: mex:Mext_2260 rhomboid family protein YP_001924915.1 KEGG: mex:Mext_2261 hypothetical protein YP_001924916.1 PFAM: CBS domain containing protein; KEGG: mex:Mext_2262 CBS domain containing protein YP_001924917.1 PFAM: Patatin; KEGG: mex:Mext_2263 patatin YP_001924918.1 PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: mex:Mext_2264 phosphoribosyl-AMP cyclohydrolase YP_001924919.1 PFAM: GTP cyclohydrolase I; KEGG: mex:Mext_2265 GTP cyclohydrolase I YP_001924920.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: mex:Mext_2266 nitrogen-fixing NifU domain protein YP_001924921.1 PFAM: protein of unknown function DUF37; KEGG: mex:Mext_2267 protein of unknown function DUF37 YP_001924922.1 PFAM: protein of unknown function UPF0005; KEGG: mex:Mext_2268 protein of unknown function UPF0005 YP_001924923.1 PFAM: protein of unknown function DUF214; KEGG: mex:Mext_2269 protein of unknown function DUF214 YP_001924924.1 PFAM: regulatory protein ArsR; hypothetical protein; KEGG: mex:Mext_0720 regulatory protein ArsR YP_001924925.1 PFAM: fatty acid desaturase; KEGG: mex:Mext_0719 fatty acid desaturase YP_001924926.1 involved in the de novo synthesis of pyridoxine (Vitamin B6) YP_001924927.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids YP_001924928.1 KEGG: mex:Mext_2273 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein YP_001924929.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: mex:Mext_2274 ribonuclease III YP_001924930.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: mex:Mext_2275 GTP-binding protein Era YP_001924931.1 PFAM: methyltransferase small; KEGG: mex:Mext_2276 methyltransferase small YP_001924932.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mex:Mext_2277 pseudouridine synthase YP_001924933.1 KEGG: mex:Mext_2278 hypothetical protein YP_001924934.1 KEGG: mex:Mext_2280 hypothetical protein YP_001924935.1 KEGG: mex:Mext_2281 hypothetical protein YP_001924936.1 PFAM: K potassium transporter; KEGG: mex:Mext_2282 K potassium transporter YP_001924937.1 KEGG: mex:Mext_2283 hypothetical protein YP_001924938.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_2284 NUDIX hydrolase YP_001924939.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_2285 chemotaxis sensory transducer YP_001924940.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: mex:Mext_2286 protein of unknown function DUF610 YibQ YP_001924941.1 KEGG: mex:Mext_2287 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41 YP_001924942.1 PFAM: peptidase M23; KEGG: mex:Mext_2288 peptidase M23B YP_001924943.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA YP_001924944.1 PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_2290 general substrate transporter YP_001924945.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_2291 diguanylate cyclase YP_001924946.1 PFAM: DSBA oxidoreductase; KEGG: mex:Mext_2292 DsbA oxidoreductase YP_001924947.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming YP_001924948.1 KEGG: mex:Mext_2295 hypothetical protein YP_001924949.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: mex:Mext_2296 phosphoglycolate phosphatase YP_001924950.1 KEGG: mex:Mext_2297 hypothetical protein YP_001924951.1 KEGG: mex:Mext_2298 ribose 5-phosphate isomerase; TIGRFAM: ribose 5-phosphate isomerase; PFAM: ribose 5-phosphate isomerase YP_001924952.1 KEGG: mex:Mext_2299 hypothetical protein YP_001924953.1 PFAM: O-antigen polymerase; KEGG: mex:Mext_2300 O-antigen polymerase YP_001924954.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: mex:Mext_2301 pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_001924955.1 KEGG: gdi:GDI3686 hypothetical protein YP_001924956.1 KEGG: mex:Mext_2302 TRAP-type uncharacterized transport system periplasmic component-like protein YP_001924957.1 PFAM: regulatory protein RecX; KEGG: mex:Mext_2303 hypothetical protein YP_001924958.1 PFAM: OsmC family protein; KEGG: mex:Mext_2304 OsmC family protein YP_001924959.1 PFAM: radical SAM domain protein; KEGG: mex:Mext_2305 radical SAM domain protein YP_001924960.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: mex:Mext_2306 uracil-DNA glycosylase superfamily YP_001924961.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_2307 alcohol dehydrogenase GroES domain protein YP_001924962.1 KEGG: mex:Mext_2308 hypothetical protein YP_001924963.1 KEGG: mex:Mext_2309 conserved hypothetical proteinn YP_001924964.1 KEGG: mex:Mext_2310 hypothetical protein YP_001924965.1 KEGG: mex:Mext_2311 HpcH/HpaI aldolase YP_001924966.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_2312 glutathione S-transferase domain YP_001924967.1 KEGG: mex:Mext_2316 hypothetical protein YP_001924968.1 PFAM: nitroreductase; KEGG: mex:Mext_2317 nitroreductase YP_001924969.1 KEGG: mex:Mext_2318 hypothetical protein YP_001924970.1 KEGG: mex:Mext_2319 hypothetical protein YP_001924972.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: mex:Mext_2320 regulatory protein GntR HTH YP_001924973.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_001924974.1 KEGG: mex:Mext_2322 hypothetical protein YP_001924975.1 PFAM: ROK family protein; KEGG: mex:Mext_2323 ROK family protein YP_001924976.1 PFAM: sodium:dicarboxylate symporter; KEGG: mex:Mext_2324 sodium:dicarboxylate symporter YP_001924977.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme YP_001924978.1 lipoprotein signal peptidase; integral hypothetical protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_001924979.1 KEGG: mex:Mext_2327 hypothetical protein YP_001924980.1 PFAM: peptidase M16 domain protein; KEGG: mex:Mext_2328 peptidase M16 domain protein YP_001924981.1 PFAM: peptidase M16 domain protein; KEGG: mex:Mext_2329 peptidase M16 domain protein YP_001924982.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_2330 glyoxalase/bleomycin resistance protein/dioxygenase YP_001924983.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: mex:Mext_2331 oxidoreductase FAD/NAD(P)-binding domain protein YP_001924984.1 TIGRFAM: dethiobiotin synthase; KEGG: mex:Mext_2332 dethiobiotin synthase YP_001924985.1 KEGG: mex:Mext_2333 PRC-barrel YP_001924986.1 PFAM: response regulator receiver; KEGG: mex:Mext_2334 response regulator receiver YP_001924987.1 PFAM: protein of unknown function DUF1275; KEGG: mex:Mext_2335 protein of unknown function DUF1275 YP_001924988.1 SMART: WD-40 repeat protein; KEGG: mex:Mext_2336 WD-40 repeat protein YP_001924989.1 KEGG: mex:Mext_2337 hypothetical protein YP_001924990.1 KEGG: mex:Mext_2338 hypothetical protein YP_001924991.1 KEGG: mex:Mext_2339 hypothetical protein YP_001924992.1 PFAM: protein of unknown function DUF1025; KEGG: mex:Mext_2340 protein of unknown function DUF1025 YP_001924993.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: haloacid dehalogenase; KEGG: mex:Mext_2341 pyrimidine 5'-nucleotidase YP_001924994.1 TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: mex:Mext_2342 acetylglutamate kinase YP_001924995.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: rsq:Rsph17025_4217 hypothetical protein YP_001924996.1 KEGG: mex:Mext_2343 hypothetical protein YP_001924997.1 PFAM: MOSC domain containing protein; KEGG: mex:Mext_2344 MOSC domain containing protein YP_001924998.1 PFAM: MOSC domain containing protein; KEGG: mex:Mext_2345 MOSC domain containing protein YP_001924999.1 KEGG: mex:Mext_2346 ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA; Clp domain protein; ATPase activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase YP_001925000.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_2347 metallophosphoesterase YP_001925001.1 PFAM: short chain fatty acid transporter; KEGG: mex:Mext_2348 short chain fatty acid transporter YP_001925002.1 PFAM: OmpW family protein; KEGG: bra:BRADO6590 conserved hypothetical protein; signal peptide; outer hypothetical protein precursor YP_001925003.1 PFAM: protein of unknown function DUF423; KEGG: mex:Mext_2349 protein of unknown function DUF423 YP_001925004.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential YP_001925005.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: mex:Mext_2351 60 kDa inner membrane insertion protein YP_001925006.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: mex:Mext_2352 ribonuclease P protein component YP_001925007.1 in Escherichia coli transcription of this gene is enhanced by polyamines YP_001925008.1 PFAM: protein of unknown function DUF1465; KEGG: mex:Mext_2354 protein of unknown function DUF1465 YP_001925009.1 TIGRFAM: ribosomal protein L31; KEGG: mex:Mext_2355 ribosomal protein L31 YP_001925010.1 KEGG: mex:Mext_2356 lipid A ABC exporter family, fused ATPase and inner membrane subunits; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter; SMART: AAA ATPase YP_001925011.1 catalyzes the formation of pyruvate from D-cysteine YP_001925013.1 PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_2360 OmpA/MotB domain protein YP_001925014.1 KEGG: mex:Mext_2361 hypothetical protein YP_001925015.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_2362 metallophosphoesterase YP_001925016.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: mex:Mext_2363 5-formyltetrahydrofolate cyclo-ligase YP_001925017.1 PFAM: protein of unknown function DUF710; KEGG: mex:Mext_2364 protein of unknown function DUF710 YP_001925018.1 KEGG: mex:Mext_2365 hypothetical protein YP_001925019.1 KEGG: mex:Mext_2366 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_001925020.1 KEGG: mex:Mext_2367 hypothetical protein YP_001925021.1 PFAM: phosphoglycerate kinase; KEGG: mex:Mext_2368 phosphoglycerate kinase YP_001925022.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis YP_001925023.1 PFAM: thiamine monophosphate synthase; KEGG: mex:Mext_2370 thiamine monophosphate synthase YP_001925024.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_2371 Sel1 domain protein repeat-containing protein YP_001925025.1 PFAM: amino acid permease-associated region; KEGG: mex:Mext_2372 amino acid permease-associated region YP_001925026.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: mex:Mext_2373 carbohydrate kinase, YjeF related protein YP_001925027.1 PFAM: nitrogen regulatory protein P-II; KEGG: mex:Mext_2374 nitrogen regulatory protein P-II YP_001925028.1 catalyzes the formation of glutamate from glutamine YP_001925029.1 PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mex:Mext_2376 glutamate--ammonia ligase YP_001925030.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mex:Mext_2377 glutamine synthetase, type I YP_001925031.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bbt:BBta_7611 hypothetical protein YP_001925032.1 PFAM: NADPH-dependent FMN reductase; KEGG: mex:Mext_2378 NADPH-dependent FMN reductase YP_001925033.1 KEGG: mex:Mext_2379 hypothetical protein YP_001925034.1 KEGG: mex:Mext_2380 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein YP_001925035.1 PFAM: protein of unknown function DUF983; KEGG: mex:Mext_2381 protein of unknown function DUF983 YP_001925036.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_2382 NUDIX hydrolase YP_001925037.1 KEGG: mex:Mext_2383 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; type IV pilus assembly PilZ; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001925038.1 KEGG: mex:Mext_2384 hypothetical protein YP_001925039.1 PFAM: domain of unknown function DUF1730; KEGG: mex:Mext_2385 domain of unknown function DUF1730 YP_001925040.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_2386 glutathione S-transferase domain YP_001925041.1 KEGG: mex:Mext_2387 undecaprenol kinase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA YP_001925042.1 PFAM: methylmalonyl-CoA mutase; KEGG: mex:Mext_2388 methylmalonyl-CoA mutase YP_001925043.1 KEGG: mex:Mext_2389 hypothetical protein YP_001925044.1 KEGG: mex:Mext_2390 hypothetical protein YP_001925045.1 KEGG: mex:Mext_2391 hypothetical protein YP_001925046.1 KEGG: acr:Acry_1650 hypothetical protein YP_001925047.1 KEGG: mar:MAE_08430 hypothetical protein YP_001925048.1 KEGG: mex:Mext_3690 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_001925049.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3691 dTDP-glucose 4,6-dehydratase YP_001925050.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_2394 dTDP-4-dehydrorhamnose reductase YP_001925051.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase; KEGG: mex:Mext_2395 glucose-1-phosphate thymidylyltransferase YP_001925052.1 KEGG: mex:Mext_2396 hypothetical protein YP_001925053.1 PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_2397 secretion protein HlyD family protein YP_001925054.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins YP_001925055.1 KEGG: mex:Mext_2399 peptidase, M50 family YP_001925056.1 PFAM: GAF domain protein; KEGG: mex:Mext_2400 GAF domain protein YP_001925057.1 KEGG: mex:Mext_2401 hypothetical protein YP_001925058.1 PFAM: O-methyltransferase family 2; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_2402 methyltransferase type 12 YP_001925059.1 KEGG: mex:Mext_2403 hypothetical protein YP_001925060.1 PFAM: FAD dependent oxidoreductase; tryptophan halogenase; KEGG: mex:Mext_2404 tryptophan halogenase YP_001925061.1 KEGG: mex:Mext_2405 hypothetical protein YP_001925062.1 PFAM: radical SAM domain protein; KEGG: mex:Mext_2406 radical SAM domain protein YP_001925063.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_2407 helix-turn-helix-domain containing protein AraC type YP_001925064.1 PFAM: SapC family protein; KEGG: mex:Mext_2408 SapC family protein YP_001925065.1 PFAM: Hemolysin-type calcium-binding region; GLUG domain protein; KEGG: mex:Mext_2409 hypothetical protein YP_001925066.1 PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: mex:Mext_2414 multicopper oxidase type 3 YP_001925067.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer YP_001925068.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates YP_001925069.1 binds and unfolds substrates as part of the ClpXP protease YP_001925070.1 KEGG: mex:Mext_2418 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; ATPase AAA; ATPase activities AAA_5; SMART: AAA ATPase YP_001925073.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_2461 glycosyl transferase group 1 YP_001925074.1 KEGG: mex:Mext_2462 hypothetical protein YP_001925075.1 PFAM: methyltransferase small; ribosomal L11 methyltransferase; methyltransferase type 12; KEGG: mex:Mext_2463 methyltransferase small YP_001925076.1 PFAM: Protein of unknown function YqcI/YcgG; KEGG: mex:Mext_2464 protein of unknown function YqcI/YcgG YP_001925077.1 KEGG: mex:Mext_2465 hypothetical protein YP_001925078.1 TIGRFAM: oligopeptide transporters, OPT superfamily; oligopeptide transporter, OPT family; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: mex:Mext_2466 oligopeptide transporter, OPT family YP_001925079.1 PFAM: ABC transporter; KEGG: mex:Mext_2467 ABC transporter YP_001925082.1 KEGG: mag:amb4050 hypothetical protein YP_001925086.1 PFAM: resolvase; KEGG: mag:amb4044 site-specific recombinase YP_001925087.1 PFAM: transposase IS4 family protein; KEGG: ret:RHE_PA00092 probable insertion sequence transposase, IS4 family YP_001925091.1 PFAM: transposase mutator type; KEGG: swi:Swit_4911 transposase, mutator type YP_001925092.1 PFAM: integrase family protein; KEGG: azc:AZC_1527 phage integrase YP_001925093.1 KEGG: mex:Mext_2468 hypothetical protein YP_001925094.1 PFAM: ribonuclease BN; KEGG: mex:Mext_2469 ribonuclease BN YP_001925095.1 KEGG: mex:Mext_2470 hypothetical protein YP_001925096.1 KEGG: mex:Mext_2471 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2 YP_001925097.1 PFAM: endonuclease V; KEGG: mex:Mext_2472 deoxyribonuclease V YP_001925098.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_001925099.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_001925100.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_001925101.1 KEGG: mex:Mext_2476 hypothetical protein YP_001925102.1 PFAM: Flp/Fap pilin component; KEGG: mex:Mext_2477 Flp/Fap pilin component YP_001925103.1 PFAM: peptidase A24A prepilin type IV; KEGG: mex:Mext_2478 peptidase A24A prepilin type IV YP_001925104.1 TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: mex:Mext_2479 Flp pilus assembly protein CpaB YP_001925105.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: mex:Mext_2480 type II and III secretion system protein YP_001925106.1 TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; PFAM: Pilus biogenesis CpaD family protein; KEGG: mex:Mext_2481 pilus (Caulobacter type) biogenesis lipoprotein CpaD YP_001925107.1 KEGG: mex:Mext_2482 pilus assembly protein CpaE YP_001925108.1 PFAM: type II secretion system protein E; KEGG: mex:Mext_2483 type II secretion system protein E YP_001925109.1 PFAM: type II secretion system protein; KEGG: mex:Mext_2484 type II secretion system protein YP_001925110.1 PFAM: type II secretion system protein; KEGG: mex:Mext_2485 type II secretion system protein YP_001925111.1 PFAM: MaoC domain protein dehydratase; KEGG: mex:Mext_2486 MaoC domain protein dehydratase YP_001925112.1 PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_2487 major facilitator superfamily MFS_1 YP_001925113.1 PFAM: OsmC family protein; KEGG: mex:Mext_2488 OsmC family protein YP_001925114.1 PFAM: CoA-binding domain protein; KEGG: mex:Mext_2489 CoA-binding domain protein YP_001925115.1 PFAM: thioesterase superfamily protein; KEGG: mex:Mext_2490 thioesterase superfamily protein YP_001925116.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_2491 major facilitator superfamily MFS_1 YP_001925117.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_2492 diguanylate cyclase YP_001925118.1 PFAM: BA14K family protein; KEGG: mex:Mext_2493 BA14K family protein YP_001925119.1 KEGG: mex:Mext_2494 conserved hypothetical membrane spanning protein YP_001925120.1 PFAM: CsbD family protein; KEGG: mex:Mext_2495 CsbD family protein YP_001925121.1 KEGG: mex:Mext_2496 hypothetical protein YP_001925122.1 PFAM: 3'-5' exonuclease; KEGG: mex:Mext_2497 3'-5' exonuclease YP_001925123.1 KEGG: mex:Mext_2498 protein of unknown function DUF1239 YP_001925124.1 PFAM: OstA family protein; KEGG: mex:Mext_2499 OstA family protein YP_001925125.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_2500 ABC transporter YP_001925126.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: mex:Mext_2501 RNA polymerase sigma-54 factor, RpoN YP_001925127.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: mex:Mext_2502 ribosomal subunit interface protein YP_001925128.1 TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: mex:Mext_2503 PTS IIA-like nitrogen-regulatory protein PtsN YP_001925129.1 KEGG: mex:Mext_2504 hypothetical protein YP_001925130.1 KEGG: mex:Mext_2505 magnesium chelatase ATPase subunit I; TIGRFAM: magnesium chelatase ATPase subunit I; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase YP_001925131.1 catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate YP_001925132.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_001925133.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: mex:Mext_2508 multiple antibiotic resistance (MarC)-related protein YP_001925134.1 PFAM: methyltransferase type 11; KEGG: mex:Mext_2509 methyltransferase type 11 YP_001925135.1 KEGG: mex:Mext_2510 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein YP_001925136.1 KEGG: mex:Mext_2511 hypothetical protein YP_001925137.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mex:Mext_2512 tyrosine recombinase XerD YP_001925138.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_2513 diguanylate cyclase YP_001925139.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: mex:Mext_2514 glycoside hydrolase family 3 domain protein YP_001925140.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_2515 binding-protein-dependent transport systems inner membrane component YP_001925141.1 KEGG: mex:Mext_2516 hypothetical protein YP_001925142.1 PFAM: aminotransferase class I and II; KEGG: mex:Mext_2517 aminotransferase class I and II YP_001925144.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_2519 efflux transporter, RND family, MFP subunit YP_001925145.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_2520 acriflavin resistance protein YP_001925146.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_2521 acriflavin resistance protein YP_001925147.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mex:Mext_2522 RND efflux system, outer membrane lipoprotein, NodT family YP_001925148.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_001925149.1 KEGG: mex:Mext_2524 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_001925150.1 KEGG: mex:Mext_2525 hypothetical protein YP_001925151.1 KEGG: mex:Mext_2526 hypothetical protein YP_001925152.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: mex:Mext_2527 thiamine pyrophosphate protein TPP binding domain protein YP_001925153.1 PFAM: thiol-disulphide oxidoreductase DCC; KEGG: mex:Mext_2528 thiol-disulphide oxidoreductase DCC YP_001925154.1 PFAM: polyprenyl synthetase; KEGG: mex:Mext_2529 polyprenyl synthetase YP_001925155.1 TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: mex:Mext_2530 monofunctional biosynthetic peptidoglycan transglycosylase YP_001925156.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: mex:Mext_2531 deoxyribodipyrimidine photo-lyase YP_001925157.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: mex:Mext_2532 TRAP dicarboxylate transporter-DctP subunit YP_001925158.1 KEGG: mex:Mext_2533 protein tyrosine phosphatase YP_001925159.1 PFAM: extracellular ligand-binding receptor; KEGG: mex:Mext_2534 extracellular ligand-binding receptor YP_001925160.1 PFAM: polysaccharide export protein; KEGG: mex:Mext_2535 polysaccharide export protein YP_001925161.1 PFAM: sulfatase; KEGG: mex:Mext_2536 sulfatase YP_001925162.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: mex:Mext_2537 capsule polysaccharide biosynthesis protein YP_001925163.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: mex:Mext_2538 capsule polysaccharide biosynthesis protein YP_001925164.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_2539 short-chain dehydrogenase/reductase SDR YP_001925165.1 PFAM: formyl transferase domain protein; KEGG: mex:Mext_2540 formyl transferase domain protein YP_001925166.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol YP_001925167.1 TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: mex:Mext_2542 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_001925168.1 PFAM: cytochrome b/b6 domain; KEGG: mex:Mext_2543 cytochrome b/b6 domain YP_001925169.1 PFAM: cytochrome c1; KEGG: mex:Mext_2544 cytochrome c1 YP_001925170.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2424 transposase, IS4 YP_001925171.1 Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate YP_001925172.1 KEGG: mex:Mext_2546 hypothetical protein YP_001925173.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_2547 metallophosphoesterase YP_001925174.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis YP_001925175.1 KEGG: mex:Mext_2549 hypothetical protein YP_001925176.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_001925177.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: mex:Mext_2551 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_001925178.1 PFAM: protein of unknown function DUF29; KEGG: rpe:RPE_0134 protein of unknown function DUF29 YP_001925179.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_001925180.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: mex:Mext_2553 phosphoribosyl-ATP diphosphatase YP_001925181.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis YP_001925182.1 KEGG: rpa:RPA2723 hypothetical protein YP_001925183.1 KEGG: mex:Mext_2556 hypothetical protein YP_001925184.1 PFAM: response regulator receiver; KEGG: mex:Mext_2557 response regulator receiver YP_001925186.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2558 ErfK/YbiS/YcfS/YnhG family protein YP_001925187.1 KEGG: mex:Mext_2559 hypothetical protein YP_001925188.1 TIGRFAM: phasin; PFAM: Phasin 2 family protein; KEGG: mex:Mext_2560 phasin YP_001925189.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: mex:Mext_2561 PAS sensor protein YP_001925190.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_001925191.1 PFAM: protein of unknown function DUF485; KEGG: mex:Mext_2563 protein of unknown function DUF485 YP_001925192.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: mex:Mext_2564 SSS sodium solute transporter superfamily YP_001925193.1 PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_2565 major facilitator superfamily MFS_1 YP_001925194.1 KEGG: mex:Mext_2566 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region YP_001925195.1 PFAM: heparinase; KEGG: mex:Mext_2567 heparinase II/III family protein YP_001925196.1 PFAM: Rhodanese domain protein; KEGG: mex:Mext_2568 rhodanese domain protein YP_001925197.1 KEGG: mex:Mext_2569 hypothetical protein YP_001925198.1 PFAM: Hemolysin-type calcium-binding region; KEGG: mex:Mext_2570 hemolysin-type calcium-binding region YP_001925199.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_2571 DEAD/DEAH box helicase domain protein YP_001925200.1 PFAM: protein of unknown function DUF1508; KEGG: mex:Mext_2572 protein of unknown function DUF1508 YP_001925201.1 KEGG: mex:Mext_2573 hypothetical protein YP_001925203.1 PFAM: thioesterase superfamily protein; KEGG: mex:Mext_2575 thioesterase superfamily protein YP_001925204.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_2576 beta-lactamase domain protein YP_001925205.1 KEGG: mex:Mext_2577 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II YP_001925206.1 KEGG: pla:Plav_0331 hypothetical protein YP_001925207.1 PFAM: FRG domain protein; KEGG: pla:Plav_0332 FRG domain protein YP_001925208.1 KEGG: pla:Plav_0336 nucleoside 2-deoxyribosyltransferase YP_001925209.1 KEGG: pla:Plav_0334 hypothetical protein YP_001925210.1 PFAM: ExsB family protein; KEGG: pla:Plav_0335 ExsB family protein YP_001925211.1 PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: pla:Plav_0336 nucleoside 2-deoxyribosyltransferase YP_001925212.1 KEGG: pla:Plav_0337 hypothetical protein YP_001925213.1 KEGG: pla:Plav_0338 hypothetical protein YP_001925214.1 PFAM: helix-turn-helix domain protein; KEGG: pla:Plav_0339 transcriptional regulator, XRE family YP_001925215.1 KEGG: rsp:RSP_1623 hypothetical protein YP_001925216.1 KEGG: rsp:RSP_1621 deoxyguanosinetriphosphate triphosphohydrolase-like protein; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_001925217.1 KEGG: scl:sce8069 hypothetical protein YP_001925218.1 KEGG: mex:Mext_1917 hypothetical protein YP_001925219.1 KEGG: nha:Nham_4579 integrase, catalytic region YP_001925221.1 KEGG: ang:An12g04840 hypothetical protein Pfam: DUF827 PspA_IM30 PROSITE: PRO_RICH SER_RICH YP_001925224.1 PFAM: ribosomal protein L21; KEGG: mmr:Mmar10_2784 50S ribosomal protein L21/unknown domain fusion protein YP_001925226.1 KEGG: amr:AM1_3457 hypothetical protein YP_001925227.1 KEGG: amr:AM1_3458 hypothetical protein YP_001925228.1 PFAM: protein of unknown function DUF156; KEGG: rpa:RPA1661 DUF156 YP_001925229.1 PFAM: protein of unknown function DUF326; KEGG: rle:pRL110328 hypothetical protein YP_001925230.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: mex:Mext_2691 Cu(I)-responsive transcriptional regulator YP_001925231.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: atc:AGR_C_2202 copper-transporting ATPase YP_001925232.1 PFAM: Heavy metal transport/detoxification protein; KEGG: atc:AGR_C_2220 hypothetical protein YP_001925233.1 KEGG: xau:Xaut_4827 hypothetical protein YP_001925234.1 PFAM: Hemolysin-type calcium-binding region; KEGG: pde:Pden_2124 hemolysin-type calcium-binding region YP_001925235.1 KEGG: bbt:BBta_7141 ABC transporter family, HlyB subfamily; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter; SMART: AAA ATPase YP_001925236.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: nha:Nham_3025 type I secretion membrane fusion protein, HlyD YP_001925237.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: noc:Noc_0474 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_001925238.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: noc:Noc_0475 respiratory-chain NADH dehydrogenase, subunit 1 YP_001925239.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: noc:Noc_0476 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 YP_001925240.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: noc:Noc_0477 NADH-ubiquinone oxidoreductase, chain 4L YP_001925241.1 KEGG: noc:Noc_0478 NADH dehydrogenase (quinone); TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_001925242.1 KEGG: noc:Noc_0480 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_001925243.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: noc:Noc_0481 NADH dehydrogenase (quinone) YP_001925244.1 KEGG: sil:SPOA0367 ABC transporter, permease protein YP_001925245.1 KEGG: tfu:Tfu_2432 hypothetical protein YP_001925246.1 KEGG: oan:Oant_3233 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein YP_001925247.1 PFAM: lytic transglycosylase; KEGG: rpb:RPB_2229 lytic transglycosylase, catalytic YP_001925248.1 KEGG: rpd:RPD_4266 hypothetical protein YP_001925249.1 KEGG: bra:BRADO1523 conserved hypothetical protein; exported protein YP_001925250.1 KEGG: rpd:RPD_3912 hypothetical protein YP_001925252.1 PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: bur:Bcep18194_C6989 transposase, IS605 OrfB YP_001925253.1 PFAM: DnaJ central domain protein; KEGG: mms:mma_1030 hypothetical protein YP_001925254.1 PFAM: protein of unknown function DUF411; KEGG: xau:Xaut_4590 protein of unknown function DUF411 YP_001925255.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: xau:Xaut_3972 heavy metal efflux pump, CzcA family YP_001925256.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: nwi:Nwi_3130 secretion protein HlyD YP_001925257.1 KEGG: xau:Xaut_4593 hypothetical protein YP_001925258.1 KEGG: xau:Xaut_3975 hypothetical protein YP_001925261.1 KEGG: reh:H16_B0351 converved hypothetical protein YP_001925262.1 KEGG: rca:Rcas_3651 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_001925264.1 PFAM: protein of unknown function DUF1109; KEGG: bja:blr4929 hypothetical protein YP_001925265.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_001925266.1 KEGG: cel:Y39B6A.1 Y39B6A.1 YP_001925267.1 KEGG: ret:RHE_CH02513 hypothetical protein YP_001925268.1 KEGG: bbt:BBta_6516 exported protein of unknown function YP_001925269.1 KEGG: sme:SMc02280 hypothetical protein YP_001925270.1 KEGG: xau:Xaut_4904 outer membrane efflux protein YP_001925271.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: xau:Xaut_4602 multicopper oxidase type 3 YP_001925272.1 KEGG: xau:Xaut_4604 hypothetical protein YP_001925273.1 KEGG: xau:Xaut_4604 hypothetical protein YP_001925274.1 KEGG: nha:Nham_4637 cytochrome c family protein YP_001925275.1 PFAM: glycosyl transferase group 1; KEGG: tel:tlr0242 probable glycosyltransferase YP_001925276.1 KEGG: ajs:Ajs_1328 hypothetical protein YP_001925277.1 KEGG: swi:Swit_4063 hypothetical protein YP_001925278.1 KEGG: cak:Caul_3799 hypothetical protein YP_001925279.1 KEGG: cak:Caul_3800 hypothetical protein YP_001925280.1 PFAM: SMC domain protein; KEGG: cak:Caul_3801 SMC domain protein YP_001925281.1 KEGG: ama:AM836 hypothetical protein YP_001925282.1 KEGG: nha:Nham_3779 metallophosphoesterase YP_001925283.1 PFAM: ATPase AAA; SMART: AAA ATPase; KEGG: nha:Nham_3781 ATPase activities, AAA_5 YP_001925284.1 KEGG: rpe:RPE_2440 hypothetical protein YP_001925285.1 PFAM: metallophosphoesterase; KEGG: nha:Nham_3779 metallophosphoesterase YP_001925286.1 KEGG: rpe:RPE_2441 hypothetical protein YP_001925287.1 KEGG: rpe:RPE_2434 hypothetical protein YP_001925288.1 PFAM: helix-turn-helix domain protein; KEGG: rle:pRL110239 hypothetical protein YP_001925289.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_2492 diguanylate cyclase YP_001925290.1 PFAM: acyltransferase 3; KEGG: mex:Mext_1250 acyltransferase 3 YP_001925292.1 KEGG: bta:784393 hypothetical protein LOC784393 YP_001925293.1 KEGG: mag:amb3759 hypothetical protein YP_001925294.1 KEGG: rpd:RPD_0025 integrase, catalytic region YP_001925295.1 SMART: AAA ATPase; KEGG: bur:Bcep18194_C6544 hypothetical protein YP_001925296.1 KEGG: rpd:RPD_0027 hypothetical protein YP_001925297.1 KEGG: rpd:RPD_0027 hypothetical protein YP_001925298.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_2578 RNA polymerase sigma factor, sigma-70 family YP_001925299.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: mex:Mext_2579 large conductance mechanosensitive channel protein YP_001925300.1 KEGG: mex:Mext_2580 hypothetical protein YP_001925301.1 PFAM: protein of unknown function DUF1236; KEGG: mex:Mext_2581 protein of unknown function DUF1236 YP_001925302.1 PFAM: aminotransferase class I and II; KEGG: mex:Mext_2582 aminotransferase class I and II YP_001925303.1 KEGG: mex:Mext_2583 hypothetical protein YP_001925304.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_2584 ATP-binding region ATPase domain protein YP_001925305.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_2585 response regulator receiver YP_001925306.1 PFAM: regulatory protein MarR; KEGG: mex:Mext_2586 regulatory protein MarR YP_001925307.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_001925308.1 KEGG: mex:Mext_2588 hypothetical protein YP_001925309.1 PFAM: Flp/Fap pilin component; KEGG: bja:bsl1442 pilus assembly protein pilin subunit YP_001925310.1 KEGG: mex:Mext_2590 conserved hypothetical proteinn YP_001925311.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: mex:Mext_2591 multi antimicrobial extrusion protein MatE YP_001925312.1 TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mex:Mext_2592 potassium efflux system protein YP_001925313.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_001925314.1 KEGG: mex:Mext_2594 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: aminoglycoside phosphotransferase YP_001925315.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: mex:Mext_2595 redoxin domain protein YP_001925316.1 PFAM: protein of unknown function DUF179; KEGG: mex:Mext_2596 protein of unknown function DUF179 YP_001925317.1 KEGG: mex:Mext_2597 hypothetical protein YP_001925318.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001925319.1 PFAM: hypothetical protein; KEGG: mex:Mext_2599 helix-turn-helix type 11 domain protein YP_001925320.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_2600 glutathione S-transferase YP_001925321.1 KEGG: mex:Mext_2601 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase YP_001925324.1 KEGG: mex:Mext_2602 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_001925325.1 TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: mex:Mext_2603 flagellar biosynthetic protein FlhB YP_001925326.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: mex:Mext_2604 flagellar biosynthetic protein FliR YP_001925327.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: mex:Mext_2605 flagellar biosynthetic protein FliQ YP_001925328.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: mex:Mext_2606 flagellar hook-basal body complex subunit FliE YP_001925329.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod YP_001925330.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum YP_001925331.1 KEGG: mex:Mext_2609 hypothetical protein YP_001925332.1 PFAM: FAD dependent oxidoreductase; KEGG: mex:Mext_2610 FAD dependent oxidoreductase YP_001925333.1 PFAM: transglutaminase; KEGG: mex:Mext_2611 transglutaminase YP_001925334.1 TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: mex:Mext_2612 heme exporter protein CcmC YP_001925335.1 TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD); KEGG: mex:Mext_2613 heme exporter protein CcmD YP_001925336.1 TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; thioredoxin; KEGG: mex:Mext_2614 periplasmic protein thiol--disulphide oxidoreductase DsbE YP_001925337.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mex:Mext_2615 protein of unknown function DUF224 cysteine-rich region domain protein YP_001925338.1 PFAM: protein of unknown function DUF162; KEGG: mex:Mext_2616 protein of unknown function DUF162 YP_001925339.1 PFAM: protein of unknown function DUF162; KEGG: mex:Mext_2617 protein of unknown function DUF162 YP_001925340.1 PFAM: transglutaminase; KEGG: mex:Mext_2618 transglutaminase YP_001925341.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_001925342.1 forms a direct contact with the tRNA during translation YP_001925343.1 KEGG: mex:Mext_2621 conserved hypothetical proteinn YP_001925344.1 PFAM: TOBE domain protein; KEGG: mex:Mext_2622 TOBE domain protein YP_001925345.1 PFAM: aldose 1-epimerase; KEGG: mex:Mext_2623 aldose 1-epimerase YP_001925346.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_2624 ABC transporter YP_001925347.1 KEGG: mex:Mext_2625 hypothetical protein YP_001925350.1 KEGG: mex:Mext_2626 hypothetical protein YP_001925356.1 KEGG: mex:Mext_4382 hypothetical protein YP_001925357.1 KEGG: reu:Reut_A2391 hypothetical protein YP_001925358.1 PFAM: peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_4383 peptidoglycan-binding domain 1 protein YP_001925359.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_3533 hypothetical protein YP_001925361.1 KEGG: mex:Mext_3534 hypothetical protein YP_001925362.1 KEGG: mex:Mext_3535 NLP/P60 protein YP_001925363.1 PFAM: Domain of unknown function DUF1833; KEGG: bvi:Bcep1808_3224 hypothetical protein YP_001925364.1 KEGG: dvu:DVU2156 hypothetical protein YP_001925365.1 TIGRFAM: phage tape measure protein; KEGG: mca:MCA2670 prophage LambdaMc01, tail tape measure protein YP_001925371.1 KEGG: rsh:Rsph17029_0639 phage protein, HK97 GP10 family YP_001925372.1 TIGRFAM: phage head-tail adaptor YP_001925373.1 KEGG: syx:SynWH7803_2397 hypothetical protein YP_001925374.1 KEGG: pla:Plav_0908 phage conserved hypothetical protein, phiE125 gp8 YP_001925375.1 KEGG: azc:AZC_0020 initiation factor 2 protein YP_001925376.1 KEGG: aav:Aave_1619 phage major capsid protein, HK97 family YP_001925377.1 PFAM: peptidase U35 phage prohead HK97; KEGG: bps:BPSL1142 phage-related protein YP_001925378.1 TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: hch:HCH_04555 phage portal protein, HK97 family YP_001925379.1 PFAM: terminase; KEGG: dvu:DVU1503 terminase, large subunit YP_001925381.1 KEGG: net:Neut_1474 HNH endonuclease YP_001925386.1 KEGG: bmu:Bmul_5604 hypothetical protein YP_001925387.1 PFAM: ATPase activities AAA_5; KEGG: dde:Dde_0483 ATPase YP_001925388.1 KEGG: dde:Dde_0484 hypothetical protein YP_001925391.1 KEGG: sit:TM1040_1640 hypothetical protein YP_001925393.1 KEGG: pol:Bpro_4951 hypothetical protein YP_001925394.1 KEGG: sse:Ssed_3512 hypothetical protein YP_001925398.1 KEGG: azc:AZC_3642 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein YP_001925399.1 PFAM: DnaB domain protein helicase domain protein; KEGG: mes:Meso_0987 replicative DNA helicase YP_001925400.1 PFAM: MT-A70 family protein; KEGG: spj:MGAS2096_Spy1128 adenine-specific methyltransferase YP_001925402.1 KEGG: cfe:CF0887 Holliday junction resolvase YP_001925403.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: mes:Meso_2353 phosphoadenosine phosphosulfate reductase YP_001925404.1 KEGG: aba:acid345_3376 hypothetical protein YP_001925405.1 KEGG: tcr:510609.60 hypothetical protein Pfam: HC2 DUF721 PROSITE: ALA_RICH GLU_RICH YP_001925409.1 KEGG: oan:Oant_1550 hypothetical protein YP_001925411.1 KEGG: oan:Oant_1553 hypothetical protein YP_001925412.1 PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: ppg:PputGB1_1721 exonuclease RNase T and DNA polymerase III YP_001925414.1 KEGG: oan:Oant_1560 hypothetical protein YP_001925416.1 KEGG: eba:p1B17 hypothetical protein YP_001925417.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_0154 helix-turn-helix domain protein YP_001925419.1 PFAM: helix-turn-helix domain protein; KEGG: mbn:Mboo_0371 transcriptional regulator, XRE family YP_001925421.1 PFAM: C-5 cytosine-specific DNA methylase; KEGG: mlo:mlr8517 modification methylase YP_001925426.1 PFAM: Gp37Gp68 family protein; KEGG: rsp:RSP_3795 hypothetical protein YP_001925429.1 KEGG: pap:PSPA7_2388 hypothetical protein YP_001925435.1 KEGG: hau:Haur_0198 hypothetical protein YP_001925440.1 KEGG: nwi:Nwi_1140 phage integrase YP_001925441.1 PFAM: protein of unknown function DUF329; KEGG: mex:Mext_2627 protein of unknown function DUF329 YP_001925442.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: mex:Mext_2628 maf protein YP_001925443.1 KEGG: mex:Mext_2629 hypothetical protein YP_001925444.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2631 TonB-dependent siderophore receptor YP_001925446.1 KEGG: mex:Mext_2632 hypothetical protein YP_001925447.1 KEGG: mex:Mext_2633 hypothetical protein YP_001925448.1 TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: mex:Mext_2634 heme exporter protein CcmB YP_001925449.1 KEGG: mex:Mext_2635 heme exporter protein CcmA; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter; SMART: AAA ATPase YP_001925450.1 TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: mex:Mext_2637 aconitate hydratase 1 YP_001925451.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: mex:Mext_2638 antibiotic biosynthesis monooxygenase YP_001925452.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: glutathione S-transferase domain; KEGG: mex:Mext_2639 maleylacetoacetate isomerase YP_001925453.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_2640 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001925454.1 PFAM: ethyl tert-butyl ether degradation ethD; KEGG: mex:Mext_2641 ethyl tert-butyl ether degradation ethD YP_001925455.1 KEGG: mex:Mext_2642 hypothetical protein YP_001925456.1 PFAM: chemotaxis sensory transducer; KEGG: mex:Mext_2643 chemotaxis sensory transducer YP_001925457.1 KEGG: mex:Mext_2644 quinolinate synthetase complex, A subunit; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A YP_001925458.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_2645 L-aspartate oxidase YP_001925459.1 KEGG: mex:Mext_2646 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_001925460.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2647 ErfK/YbiS/YcfS/YnhG family protein YP_001925462.1 KEGG: mex:Mext_2648 hypothetical protein YP_001925463.1 PFAM: protein of unknown function DUF971; KEGG: mex:Mext_2649 protein of unknown function DUF971 YP_001925464.1 KEGG: mex:Mext_2650 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001925465.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mex:Mext_2653 6-phosphogluconate dehydrogenase NAD-binding YP_001925466.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_001925467.1 KEGG: mex:Mext_2655 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: haloacid dehalogenase YP_001925468.1 KEGG: mex:Mext_2656 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_001925469.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: mex:Mext_2657 HflC protein YP_001925470.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: mex:Mext_2658 HflK protein YP_001925471.1 PFAM: dihydrofolate reductase region; KEGG: mex:Mext_2659 dihydrofolate reductase YP_001925472.1 PFAM: thymidylate synthase; KEGG: mex:Mext_2660 thymidylate synthase YP_001925473.1 PFAM: abortive infection protein; KEGG: mex:Mext_2661 abortive infection protein YP_001925474.1 PFAM: protein of unknown function DUF1321; KEGG: mex:Mext_2662 protein of unknown function DUF1321 YP_001925475.1 PFAM: cytochrome P450; KEGG: mex:Mext_2663 cytochrome P450 YP_001925476.1 TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; KEGG: mex:Mext_2664 fumarate hydratase, class II YP_001925477.1 KEGG: mex:Mext_2665 hypothetical protein YP_001925478.1 KEGG: nha:Nham_2734 hypothetical protein YP_001925479.1 PFAM: protein of unknown function DUF1052; KEGG: mex:Mext_2667 protein of unknown function DUF1052 YP_001925480.1 PFAM: periplasmic binding protein; KEGG: mex:Mext_2668 periplasmic binding protein YP_001925481.1 KEGG: mex:Mext_2669 hypothetical protein YP_001925482.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal YP_001925483.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: mex:Mext_2671 phenazine biosynthesis protein PhzF family YP_001925484.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_2672 NUDIX hydrolase YP_001925485.1 KEGG: mex:Mext_2673 hypothetical protein YP_001925486.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis YP_001925487.1 KEGG: mex:Mext_2675 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_001925488.1 PFAM: protein of unknown function DUF1611; KEGG: mex:Mext_2676 protein of unknown function DUF1611 YP_001925489.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mex:Mext_2677 mandelate racemase/muconate lactonizing protein YP_001925490.1 PFAM: lytic transglycosylase; KEGG: mex:Mext_2678 lytic transglycosylase catalytic YP_001925491.1 PFAM: myo-inositol-1-phosphate synthase; myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: mex:Mext_2679 inositol-3-phosphate synthase YP_001925492.1 KEGG: mex:Mext_2680 hypothetical protein YP_001925493.1 PFAM: methyltransferase type 11; KEGG: mex:Mext_2681 methyltransferase type 11 YP_001925494.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: mex:Mext_2682 oxidoreductase domain protein YP_001925495.1 PFAM: protein of unknown function DUF181; KEGG: mex:Mext_2683 protein of unknown function DUF181 YP_001925496.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mex:Mext_2684 xylose isomerase domain protein TIM barrel YP_001925497.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_2685 glycosyl transferase group 1 YP_001925498.1 PFAM: LmbE family protein; KEGG: mex:Mext_2686 LmbE family protein YP_001925499.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: mex:Mext_2687 uracil-DNA glycosylase superfamily YP_001925500.1 KEGG: mex:Mext_2688 hypothetical protein of unknown function YP_001925501.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: mex:Mext_2689 histidine kinase YP_001925502.1 KEGG: rle:pRL110328 hypothetical protein YP_001925503.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mex:Mext_2690 heavy metal translocating P-type ATPase YP_001925504.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: mex:Mext_2691 Cu(I)-responsive transcriptional regulator YP_001925505.1 KEGG: mex:Mext_2692 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001925506.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: azc:AZC_4440 methyl-accepting chemotaxis protein YP_001925507.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: mex:Mext_2695 tRNA pseudouridine synthase B YP_001925508.1 PFAM: ribosome-binding factor A; KEGG: mex:Mext_2696 ribosome-binding factor A YP_001925509.1 TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; GTP-binding protein HSR1-related; elongation factor Tu domain 2 protein; translation initiation factor IF-2 domain protein; Initiation factor 2 associated domain protein ; Miro domain protein; KEGG: mex:Mext_2697 translation initiation factor IF-2 YP_001925510.1 PFAM: protein of unknown function DUF448; KEGG: mex:Mext_2698 protein of unknown function DUF448 YP_001925511.1 KEGG: mex:Mext_2699 transcription termination factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH type 1 domain protein; NusA domain protein; SMART: KH domain protein YP_001925512.1 PFAM: protein of unknown function DUF150; KEGG: mex:Mext_2700 protein of unknown function DUF150 YP_001925513.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: mex:Mext_2701 streptogramin A acetyltransferase YP_001925514.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: mex:Mext_2702 aspartate-semialdehyde dehydrogenase YP_001925515.1 KEGG: mex:Mext_2703 hypothetical protein YP_001925516.1 KEGG: mex:Mext_2704 hypothetical protein YP_001925517.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2705 GCN5-related N-acetyltransferase YP_001925518.1 KEGG: mex:Mext_2706 hypothetical protein YP_001925519.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_2707 cobalamin synthesis protein P47K YP_001925520.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_2708 regulatory protein TetR YP_001925521.1 KEGG: mex:Mext_2709 hypothetical protein YP_001925522.1 KEGG: mex:Mext_2710 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001925523.1 amylomaltase; acts to release glucose from maltodextrins YP_001925524.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mex:Mext_2712 alpha amylase catalytic region YP_001925525.1 KEGG: mex:Mext_2713 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001925526.1 KEGG: mex:Mext_2714 1,4-alpha-glucan branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain YP_001925527.1 PFAM: protein of unknown function UPF0060; KEGG: mex:Mext_2715 protein of unknown function UPF0060 YP_001925529.1 KEGG: mex:Mext_2717 radical SAM domain protein YP_001925530.1 SMART: HhH-GPD family protein; KEGG: mex:Mext_2718 HhH-GPD family protein YP_001925531.1 PFAM: transcription activator effector binding; KEGG: mex:Mext_2719 transcription activator effector binding YP_001925532.1 PFAM: diaminopimelate epimerase; KEGG: mex:Mext_2720 diaminopimelate epimerase YP_001925533.1 KEGG: mex:Mext_2721 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB YP_001925534.1 PFAM: pseudouridine synthase; KEGG: mex:Mext_2722 pseudouridine synthase YP_001925535.1 KEGG: mex:Mext_2723 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_001925536.1 TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; KEGG: mex:Mext_2724 intracellular septation protein A YP_001925537.1 PFAM: hydroxyneurosporene synthase; KEGG: mex:Mext_2725 hydroxyneurosporene synthase YP_001925538.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_2726 phytoene desaturase YP_001925539.1 PFAM: polyprenyl synthetase; KEGG: mex:Mext_2727 polyprenyl synthetase YP_001925540.1 PFAM: O-methyltransferase family 2; methyltransferase type 12; KEGG: mex:Mext_2728 O-methyltransferase family 2 YP_001925541.1 TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_2729 chlorophyll synthesis pathway, BchC YP_001925542.1 KEGG: mex:Mext_2730 chlorophyllide reductase iron protein subunit X; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein YP_001925543.1 TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase component 1; KEGG: mex:Mext_2731 chlorophyllide reductase subunit Y YP_001925544.1 TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1; protein of unknown function DUF1197; KEGG: mex:Mext_2732 chlorophyllide reductase subunit Z YP_001925545.1 KEGG: mex:Mext_2733 hypothetical protein YP_001925546.1 PFAM: antenna complex alpha/beta subunit; KEGG: mex:Mext_2734 antenna complex alpha/beta subunit YP_001925547.1 PFAM: antenna complex alpha/beta subunit; KEGG: mex:Mext_2735 antenna complex alpha/beta subunit YP_001925548.1 TIGRFAM: photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; KEGG: mex:Mext_2736 photosynthetic reaction center L subunit YP_001925549.1 TIGRFAM: photosynthetic reaction center, M subunit; PFAM: photosynthetic reaction centre protein; KEGG: mex:Mext_2737 photosynthetic reaction center, M subunit YP_001925550.1 PFAM: photosynthetic reaction centre cytochrome c subunit; KEGG: mex:Mext_2738 photosynthetic reaction centre cytochrome c subunit YP_001925551.1 KEGG: mex:Mext_2739 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter; SMART: AAA ATPase YP_001925552.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_2740 type I secretion membrane fusion protein, HlyD family YP_001925553.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif YP_001925554.1 PFAM: TPR repeat-containing protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_2742 tetratricopeptide TPR_2 repeat protein YP_001925555.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_2743 alpha/beta hydrolase fold YP_001925556.1 KEGG: mex:Mext_2744 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_001925557.1 PFAM: porin; KEGG: mex:Mext_2745 porin YP_001925558.1 PFAM: protein of unknown function DUF1036; KEGG: mex:Mext_2746 protein of unknown function DUF1036 YP_001925559.1 PFAM: MOFRL domain protein; KEGG: mex:Mext_2747 hydroxypyruvate reductase YP_001925560.1 PFAM: N-formylglutamate amidohydrolase; KEGG: mex:Mext_2748 N-formylglutamate amidohydrolase YP_001925561.1 PFAM: protein of unknown function DUF1244; KEGG: mex:Mext_2749 protein of unknown function DUF1244 YP_001925562.1 KEGG: mex:Mext_2750 hypothetical protein YP_001925563.1 PFAM: glutathione S-transferase domain; KEGG: pla:Plav_1651 glutathione S-transferase domain YP_001925564.1 PFAM: protein of unknown function DUF882; peptidase M15A; KEGG: mex:Mext_2751 protein of unknown function DUF882 YP_001925565.1 PFAM: peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_2752 peptidoglycan-binding domain 1 protein YP_001925566.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase activities AAA_5; SMART: AAA ATPase; KEGG: mex:Mext_2753 sigma-54 factor interaction domain-containing protein YP_001925567.1 TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase F; KEGG: mex:Mext_2754 oligoendopeptidase, PepF/M3 family YP_001925568.1 KEGG: mex:Mext_2755 hypothetical protein YP_001925569.1 TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: mex:Mext_2756 death-on-curing family protein YP_001925570.1 PFAM: ABC transporter; KEGG: mex:Mext_2757 ABC transporter YP_001925571.1 KEGG: mex:Mext_2758 hypothetical protein YP_001925572.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: mex:Mext_2759 NAD(P)(+) transhydrogenase (AB-specific) YP_001925573.1 KEGG: mex:Mext_2760 PntAB, NAD(P) transhydrogenase, alpha2 subunit YP_001925574.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: mex:Mext_2761 NAD(P)(+) transhydrogenase (AB-specific) YP_001925575.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: mex:Mext_2762 single-stranded-DNA-specific exonuclease RecJ YP_001925576.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_2763 cyclic nucleotide-binding YP_001925577.1 PFAM: HWE histidine kinase; KEGG: mex:Mext_2764 HWE histidine kinase YP_001925578.1 PFAM: surface antigen (D15); KEGG: mex:Mext_2765 surface antigen (D15) YP_001925579.1 PFAM: protein of unknown function DUF490; KEGG: mex:Mext_2766 protein of unknown function DUF490 YP_001925580.1 KEGG: mex:Mext_2767 hypothetical protein YP_001925581.1 KEGG: mex:Mext_2768 hypothetical protein YP_001925582.1 catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide YP_001925583.1 KEGG: mex:Mext_2770 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; ATPase activities AAA_5; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; AAA ATPase YP_001925584.1 PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_2771 carbohydrate-selective porin OprB YP_001925585.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: mex:Mext_2772 cytochrome-c peroxidase YP_001925586.1 KEGG: mex:Mext_2773 hypothetical protein YP_001925587.1 KEGG: mex:Mext_2774 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001925588.1 PFAM: manganese containing catalase; KEGG: mex:Mext_2775 catalase YP_001925589.1 PFAM: protein of unknown function DUF892; KEGG: mex:Mext_2776 protein of unknown function DUF892 YP_001925590.1 KEGG: mex:Mext_2777 hypothetical protein YP_001925591.1 KEGG: mex:Mext_2778 hypothetical protein YP_001925592.1 PFAM: CBS domain containing protein; chloride channel core; KEGG: mex:Mext_2779 chloride channel core YP_001925593.1 KEGG: mex:Mext_2780 hypothetical protein YP_001925594.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis YP_001925595.1 KEGG: mex:Mext_2782 transhypothetical protein YP_001925596.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis YP_001925597.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_001925598.1 PFAM: septum formation initiator; KEGG: mex:Mext_2785 septum formation initiator YP_001925599.1 KEGG: mex:Mext_2786 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component YP_001925600.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase YP_001925601.1 KEGG: mex:Mext_2788 hypothetical protein YP_001925602.1 KEGG: mex:Mext_2789 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein YP_001925603.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_001925604.1 KEGG: mex:Mext_2791 hypothetical protein YP_001925605.1 KEGG: mex:Mext_2792 hypothetical protein YP_001925606.1 PFAM: protein of unknown function DUF1275; KEGG: gdi:GDI0471 hypothetical protein YP_001925607.1 KEGG: mex:Mext_2793 endo-1,4-beta-glucanase YP_001925608.1 KEGG: mex:Mext_2794 hypothetical protein YP_001925609.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2795 ErfK/YbiS/YcfS/YnhG family protein YP_001925610.1 KEGG: mex:Mext_2796 L-sorbosone dehydrogenase YP_001925611.1 KEGG: mex:Mext_2797 hypothetical protein YP_001925612.1 PFAM: cell wall hydrolase SleB; KEGG: mex:Mext_2798 cell wall hydrolase SleB YP_001925613.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_001925614.1 PFAM: cyclase/dehydrase; KEGG: mex:Mext_2800 cyclase/dehydrase YP_001925615.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: mex:Mext_2801 regulatory protein AsnC/Lrp family YP_001925616.1 catalyzes the formation of L-proline from L-ornithine YP_001925617.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: rpb:RPB_3236 plasmid maintenance system antidote protein, XRE family YP_001925618.1 PFAM: plasmid maintenance system killer; KEGG: rpc:RPC_3186 plasmid maintenance system killer YP_001925619.1 KEGG: mex:Mext_2810 hypothetical protein YP_001925620.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_2811 ABC transporter YP_001925621.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_2813 (2Fe-2S)-binding domain protein YP_001925622.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mex:Mext_2814 molybdopterin dehydrogenase FAD-binding YP_001925623.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_2815 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001925624.1 PFAM: CinA domain protein; KEGG: mex:Mext_2816 CinA domain protein YP_001925625.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MECDP-synthase; KEGG: mex:Mext_2817 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_001925626.1 TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase DuS; KEGG: mex:Mext_2818 hypothetical protein YP_001925627.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: mex:Mext_2819 PAS sensor protein YP_001925628.1 KEGG: mex:Mext_2820 nitrogen regulation protein NR(I); TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase activities AAA_5; SMART: AAA ATPase YP_001925629.1 PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_2821 helicase domain protein YP_001925630.1 KEGG: mex:Mext_2822 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001925631.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: mex:Mext_2823 sigma-54 factor interaction domain-containing protein YP_001925632.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: mex:Mext_2824 RNA chaperone Hfq YP_001925633.1 TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: mex:Mext_2825 GTP-binding protein HflX YP_001925634.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: mex:Mext_2826 sulphate transporter YP_001925635.1 PFAM: carbonic anhydrase; KEGG: mex:Mext_2827 carbonate dehydratase YP_001925636.1 KEGG: mex:Mext_2828 hypothetical protein YP_001925637.1 PFAM: protein of unknown function DUF305; KEGG: mex:Mext_2829 protein of unknown function DUF305 YP_001925638.1 KEGG: mex:Mext_2830 hypothetical protein YP_001925639.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_2831 acriflavin resistance protein YP_001925640.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: mex:Mext_2832 efflux transporter, RND family, MFP subunit YP_001925641.1 KEGG: mex:Mext_2833 conserved hypothetical protein; esterase/lipase/thioesterase domains YP_001925642.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_2834 ROSMUCR transcriptional regulator YP_001925643.1 PFAM: CheW domain protein; KEGG: mex:Mext_2835 CheW domain protein YP_001925644.1 PFAM: MCP methyltransferase CheR-type; hypothetical protein; KEGG: mex:Mext_2836 protein-glutamate O-methyltransferase YP_001925645.1 PFAM: CheW domain protein; KEGG: mex:Mext_2837 CheW domain protein YP_001925646.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_2838 chemotaxis sensory transducer YP_001925647.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: mex:Mext_2839 response regulator receiver YP_001925648.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: mex:Mext_2840 protein-glutamate methylesterase YP_001925649.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_2841 ATP-binding region ATPase domain protein YP_001925650.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: mex:Mext_2842 PAS sensor protein YP_001925651.1 PFAM: metallothionein family 14; KEGG: mex:Mext_2843 metallothionein family 14 YP_001925652.1 PFAM: WD-40 repeat protein; cytochrome c class I; KEGG: mex:Mext_2844 WD-40 repeat protein YP_001925653.1 PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_2845 molybdopterin binding domain YP_001925654.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_2846 molybdenum cofactor synthesis domain protein YP_001925655.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: mex:Mext_2847 molybdopterin-guanine dinucleotide biosynthesis protein B YP_001925656.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_2848 molybdenum cofactor synthesis domain protein YP_001925657.1 PFAM: regulatory protein LysR; KEGG: mex:Mext_2849 regulatory protein LysR YP_001925658.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_2850 binding-protein-dependent transport systems inner membrane component YP_001925659.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_2851 ABC transporter YP_001925660.1 PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_2852 extracellular solute-binding protein family 1 YP_001925661.1 KEGG: mex:Mext_2853 hypothetical protein YP_001925662.1 PFAM: PRC-barrel domain protein; KEGG: mex:Mext_2854 PRC-barrel domain protein YP_001925663.1 involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans YP_001925664.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space YP_001925665.1 KEGG: mex:Mext_2857 hypothetical protein YP_001925666.1 PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mex:Mext_2858 cystathionine gamma-synthase YP_001925667.1 PFAM: TspO/MBR family protein; KEGG: mex:Mext_2859 TspO/MBR family protein YP_001925668.1 PFAM: FAD linked oxidase domain protein; KEGG: mex:Mext_0214 FAD linked oxidase domain protein YP_001925669.1 PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_0213 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_001925670.1 PFAM: response regulator receiver; KEGG: mex:Mext_2860 response regulator receiver YP_001925671.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: mex:Mext_2861 hypoxanthine phosphoribosyltransferase YP_001925672.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: mex:Mext_2862 MJ0042 family finger-like protein YP_001925673.1 KEGG: mex:Mext_2863 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter; SMART: AAA ATPase YP_001925674.1 PFAM: protein of unknown function DUF214; KEGG: mex:Mext_2864 protein of unknown function DUF214 YP_001925675.1 PFAM: protein of unknown function DUF218; KEGG: mex:Mext_2865 protein of unknown function DUF218 YP_001925676.1 KEGG: mex:Mext_2866 response regulator receiver YP_001925677.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis YP_001925678.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_001925679.1 PFAM: cytidylyltransferase; KEGG: mex:Mext_2869 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_001925680.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: mex:Mext_2870 iojap-like protein YP_001925681.1 KEGG: mex:Mext_2871 hypothetical protein YP_001925682.1 KEGG: mex:Mext_2872 conserved hypothetical protein; transcriptional regulatory protein YP_001925683.1 PFAM: aldose 1-epimerase; KEGG: mex:Mext_2873 aldose 1-epimerase YP_001925685.1 KEGG: rru:Rru_A2704 hypothetical protein YP_001925686.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_2874 ABC transporter YP_001925687.1 KEGG: bra:BRADO5524 conserved hypothetical protein; signal peptide YP_001925688.1 PFAM: periplasmic solute binding protein; KEGG: mex:Mext_2875 periplasmic solute binding protein YP_001925689.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: mex:Mext_2876 molybdopterin converting factor, subunit 1 YP_001925690.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mex:Mext_2877 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001925691.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC subunit C; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: mex:Mext_2878 excinuclease ABC, C subunit YP_001925692.1 KEGG: mex:Mext_2879 hypothetical protein YP_001925693.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2880 ErfK/YbiS/YcfS/YnhG family protein YP_001925694.1 KEGG: mex:Mext_2881 periplasmic ligand-binding sensor protein YP_001925695.1 KEGG: mex:Mext_2882 porin YP_001925696.1 PFAM: protein of unknown function DUF152; KEGG: mex:Mext_2883 protein of unknown function DUF152 YP_001925697.1 PFAM: protein of unknown function DUF185; KEGG: mex:Mext_2884 protein of unknown function DUF185 YP_001925698.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mex:Mext_2885 prolipoprotein diacylglyceryl transferase YP_001925699.1 PFAM: MgtC/SapB transporter; KEGG: mex:Mext_2886 MgtC/SapB transporter YP_001925700.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate YP_001925701.1 KEGG: mex:Mext_2888 hypothetical protein YP_001925702.1 PFAM: cell wall hydrolase SleB; KEGG: mex:Mext_2889 cell wall hydrolase SleB YP_001925703.1 KEGG: mex:Mext_2890 hypothetical protein YP_001925704.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_001925705.1 KEGG: mex:Mext_2892 hypothetical protein YP_001925706.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2893 ErfK/YbiS/YcfS/YnhG family protein YP_001925707.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_2894 glyoxalase/bleomycin resistance protein/dioxygenase YP_001925708.1 KEGG: mex:Mext_2895 hypothetical protein YP_001925709.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_2896 cyclic nucleotide-binding YP_001925710.1 KEGG: amr:AM1_0924 hypothetical protein YP_001925711.1 KEGG: mex:Mext_2898 hypothetical protein YP_001925712.1 PFAM: regulatory protein MarR; transcriptional regulator TrmB; KEGG: mex:Mext_2899 regulatory protein MarR YP_001925713.1 KEGG: mex:Mext_2900 hypothetical protein YP_001925714.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_2901 beta-lactamase domain protein YP_001925715.1 KEGG: mex:Mext_2902 hypothetical protein YP_001925716.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2424 transposase, IS4 YP_001925717.1 PFAM: protein of unknown function DUF1328; KEGG: mex:Mext_2903 protein of unknown function DUF1328 YP_001925718.1 KEGG: mex:Mext_2904 hypothetical protein YP_001925719.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media YP_001925720.1 KEGG: mex:Mext_2906 hypothetical protein YP_001925721.1 KEGG: mex:Mext_2907 protein of unknown function UPF0153 YP_001925722.1 PFAM: aminotransferase class-III; KEGG: mex:Mext_2908 aminotransferase class-III YP_001925723.1 KEGG: mex:Mext_2909 hypothetical protein YP_001925724.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_2910 metallophosphoesterase YP_001925725.1 KEGG: mex:Mext_2911 hypothetical protein YP_001925726.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2912 GCN5-related N-acetyltransferase YP_001925727.1 PFAM: HhH-GPD family protein; AlkA domain protein; KEGG: mex:Mext_2913 AlkA domain protein YP_001925728.1 KEGG: mex:Mext_2914 hypothetical protein YP_001925729.1 TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: mex:Mext_2915 ribonuclease D YP_001925730.1 KEGG: mex:Mext_2916 hypothetical protein YP_001925731.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: mex:Mext_2917 serine-type D-Ala-D-Ala carboxypeptidase YP_001925732.1 PFAM: AsmA family protein; KEGG: mex:Mext_2918 AsmA family protein YP_001925733.1 KEGG: mex:Mext_2919 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_001925734.1 KEGG: mex:Mext_2920 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_001925735.1 KEGG: mex:Mext_2921 hypothetical protein YP_001925736.1 KEGG: mex:Mext_2922 hypothetical protein YP_001925737.1 PFAM: PepSY-associated TM helix domain protein; KEGG: mex:Mext_2923 PepSY-associated TM helix domain protein YP_001925738.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2924 TonB-dependent receptor YP_001925739.1 KEGG: mex:Mext_2925 hypothetical protein YP_001925740.1 TIGRFAM: prevent-host-death family protein; KEGG: mes:Meso_4551 prevent-host-death family protein YP_001925741.1 PFAM: PilT protein domain protein; KEGG: mex:Mext_2930 PilT protein domain protein YP_001925742.1 KEGG: xau:Xaut_4688 hypothetical protein YP_001925743.1 KEGG: xau:Xaut_3050 hypothetical protein YP_001925744.1 3'-5' exonuclease of DNA polymerase III YP_001925745.1 PFAM: UvrD/REP helicase; KEGG: xau:Xaut_3048 UvrD/REP helicase YP_001925746.1 KEGG: xau:Xaut_3047 ATP-dependent endonuclease YP_001925747.1 PFAM: Domain of unknown function DUF1814; KEGG: xau:Xaut_3046 domain of unknown function DUF1814 YP_001925748.1 KEGG: xau:Xaut_3045 hypothetical protein YP_001925749.1 PFAM: domain of unknown function DUF1738; KEGG: pla:Plav_3512 domain of unknown function DUF1738 YP_001925750.1 PFAM: ParB domain protein nuclease; KEGG: xau:Xaut_3031 ParB domain protein nuclease YP_001925751.1 KEGG: xau:Xaut_3030 hypothetical protein YP_001925752.1 KEGG: pla:Plav_3514 hypothetical protein YP_001925753.1 KEGG: xau:Xaut_3028 hypothetical protein YP_001925754.1 KEGG: xau:Xaut_3027 hypothetical protein YP_001925755.1 KEGG: xau:Xaut_3026 probably methylase/helicase YP_001925756.1 KEGG: xau:Xaut_3025 hypothetical protein YP_001925757.1 KEGG: xau:Xaut_3024 hypothetical protein YP_001925758.1 KEGG: xau:Xaut_3023 hypothetical protein YP_001925759.1 KEGG: xau:Xaut_3022 hypothetical protein YP_001925760.1 PFAM: protein of unknown function DUF736; KEGG: xau:Xaut_3021 protein of unknown function DUF736 YP_001925761.1 KEGG: xau:Xaut_3020 transcriptional regulator, XRE family YP_001925762.1 KEGG: xau:Xaut_3019 hypothetical protein YP_001925763.1 KEGG: xau:Xaut_3018 hypothetical protein YP_001925764.1 KEGG: xau:Xaut_3017 hypothetical protein YP_001925765.1 KEGG: xau:Xaut_3016 transcriptional regulator YP_001925766.1 KEGG: xau:Xaut_3015 replication protein A YP_001925767.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: xau:Xaut_3014 cobyrinic acid ac-diamide synthase YP_001925768.1 KEGG: bbt:BBta_7733 hypothetical protein YP_001925769.1 KEGG: xau:Xaut_3012 hypothetical protein YP_001925770.1 KEGG: xau:Xaut_3011 conjugal transfer protein precursor YP_001925771.1 PFAM: protein of unknown function DUF736; KEGG: pla:Plav_3536 protein of unknown function DUF736 YP_001925772.1 PFAM: lytic transglycosylase; KEGG: xau:Xaut_3009 lytic transglycosylase catalytic YP_001925773.1 KEGG: xau:Xaut_0588 hypothetical protein YP_001925774.1 type IV secretion VirD4 coupling protein family YP_001925775.1 KEGG: atc:AGR_L_19 hypothetical protein YP_001925776.1 TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: xau:Xaut_3004 P-type conjugative transfer ATPase TrbB YP_001925777.1 PFAM: Conjugal transfer protein TrbC; KEGG: xau:Xaut_3003 conjugal transfer protein TrbC YP_001925778.1 KEGG: xau:Xaut_3002 conjugal transfer protein TrbB YP_001925779.1 type IV secretion system VirB4 family YP_001925780.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: xau:Xaut_3000 P-type conjugative transfer protein TrbJ YP_001925781.1 KEGG: xau:Xaut_2999 hypothetical protein YP_001925782.1 type IV secretion VirB6 family YP_001925783.1 PFAM: Conjugal transfer protein; KEGG: xau:Xaut_2997 conjugal transfer protein YP_001925784.1 TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: xau:Xaut_2996 P-type conjugative transfer protein TrbG YP_001925785.1 PFAM: conjugation TrbI family protein; KEGG: xau:Xaut_2995 conjugation TrbI family protein YP_001925786.1 KEGG: oan:Oant_3222 hypothetical protein YP_001925787.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_2993 transcriptional regulator, LysR family YP_001925788.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: mca:MCA2682 prophage LambdaMc01, helicase, SNF2 family YP_001925789.1 KEGG: vei:Veis_0100 hypothetical protein YP_001925790.1 KEGG: vei:Veis_0099 hypothetical protein YP_001925791.1 KEGG: mca:MCA2685 hypothetical protein YP_001925792.1 KEGG: mca:MCA2686 hypothetical protein YP_001925793.1 KEGG: rsh:Rsph17029_1844 hypothetical protein YP_001925794.1 KEGG: xau:Xaut_2986 hypothetical protein YP_001925795.1 PFAM: UvrD/REP helicase; KEGG: xau:Xaut_2985 UvrD/REP helicase YP_001925796.1 KEGG: xau:Xaut_2985 UvrD/REP helicase YP_001925797.1 PFAM: resolvase; recombinase; KEGG: nar:Saro_0526 recombinase YP_001925798.1 KEGG: nar:Saro_0525 hypothetical protein YP_001925799.1 PFAM: Prophage CP4-57 regulatory; KEGG: pla:Plav_3562 phage transcriptional regulator, AlpA YP_001925800.1 PFAM: integrase family protein; KEGG: pla:Plav_3563 integrase family protein YP_001925801.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_001925802.1 KEGG: rpd:RPD_2221 hypothetical protein YP_001925803.1 KEGG: mex:Mext_2933 hypothetical protein YP_001925804.1 PFAM: Fmu (Sun) domain protein; KEGG: mex:Mext_2934 Fmu (Sun) domain protein YP_001925805.1 KEGG: mex:Mext_2935 hypothetical protein YP_001925806.1 KEGG: mex:Mext_2936 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_001925807.1 KEGG: mex:Mext_2937 hypothetical protein YP_001925808.1 KEGG: mex:Mext_2938 hypothetical protein YP_001925810.1 KEGG: mex:Mext_2939 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase YP_001925811.1 PFAM: cell cycle protein; KEGG: mex:Mext_2940 cell cycle protein YP_001925812.1 KEGG: mex:Mext_2941 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; glycosyltransferase 28 domain YP_001925813.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_001925814.1 KEGG: mex:Mext_2945 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein YP_001925815.1 PFAM: YcfA family protein; KEGG: mac:MA2135 hypothetical protein YP_001925816.1 PFAM: protein of unknown function UPF0150; KEGG: rpe:RPE_4348 protein of unknown function UPF0150 YP_001925817.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_001925818.1 PFAM: cell division protein FtsQ; polypeptide-transport-associated domain protein FtsQ-type; KEGG: mex:Mext_2947 polypeptide-transport-associated domain protein FtsQ-type YP_001925819.1 PFAM: cell division protein FtsA; KEGG: mex:Mext_2948 cell division protein FtsA YP_001925820.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: mex:Mext_2949 cell division protein FtsZ YP_001925821.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis YP_001925822.1 KEGG: mex:Mext_2951 lipoprotein YP_001925823.1 PFAM: glycosyl transferase family 14; KEGG: ccr:CC_2860 glycosyl transferase YP_001925824.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: mex:Mext_2954 DNA repair protein RecN YP_001925826.1 KEGG: mex:Mext_2955 hypothetical protein YP_001925827.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mex:Mext_2958 oxidoreductase alpha (molybdopterin) subunit YP_001925828.1 KEGG: mex:Mext_2959 hypothetical protein YP_001925829.1 KEGG: mex:Mext_2960 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_001925830.1 TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: mex:Mext_2961 chaperone protein DnaJ YP_001925831.1 KEGG: mex:Mext_2962 phospholipid N-methyltransferase YP_001925832.1 KEGG: mex:Mext_2963 conserved hypothetical protein; secreted protein YP_001925833.1 KEGG: mex:Mext_2964 thymidine phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; thymidine phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain YP_001925834.1 KEGG: mex:Mext_2965 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_001925835.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation YP_001925836.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mex:Mext_2967 cytidine deaminase YP_001925837.1 KEGG: mex:Mext_2968 hypothetical protein YP_001925838.1 KEGG: mex:Mext_2969 tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_001925839.1 PFAM: 3-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: mex:Mext_2970 three-deoxy-D-manno-octulosonic-acid transferase domain protein YP_001925840.1 PFAM: protein of unknown function DUF374; KEGG: mex:Mext_2971 protein of unknown function DUF374 YP_001925841.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_2972 metallophosphoesterase YP_001925842.1 PFAM: response regulator receiver; KEGG: mex:Mext_2973 response regulator receiver YP_001925843.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_2974 cold-shock protein DNA-binding YP_001925844.1 KEGG: mex:Mext_2975 hypothetical protein YP_001925845.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: mex:Mext_2976 leucyl aminopeptidase YP_001925846.1 PFAM: Tetratricopeptide TPR_4; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_2977 tetratricopeptide TPR_2 repeat protein YP_001925847.1 required for 70S ribosome assembly YP_001925848.1 PFAM: auxin efflux carrier; KEGG: mex:Mext_2979 auxin efflux carrier YP_001925849.1 class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine YP_001925850.1 PFAM: PilT protein domain protein; KEGG: vei:Veis_2039 PilT protein domain protein YP_001925851.1 TIGRFAM: prevent-host-death family protein; KEGG: reh:H16_A3382 antitoxin of toxin-antitoxin stability system YP_001925852.1 KEGG: mex:Mext_2981 hypothetical protein YP_001925853.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: mex:Mext_2982 peptide chain release factor 2 YP_001925854.1 PFAM: peptidase M23; KEGG: mex:Mext_2983 peptidase M23B YP_001925855.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: mex:Mext_2984 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001925856.1 KEGG: mex:Mext_2985 hypothetical protein YP_001925857.1 KEGG: bte:BTH_I2013 HemK family protein YP_001925858.1 KEGG: mex:Mext_2987 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_001925859.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling YP_001925860.1 KEGG: mex:Mext_2989 hypothetical protein YP_001925861.1 TIGRFAM: addiction module antidote protein; PFAM: helix-turn-helix domain protein; KEGG: pna:Pnap_4018 transcriptional regulator YP_001925862.1 TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: xfa:XF1703 hypothetical protein YP_001925863.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_001925864.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: mex:Mext_2991 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001925865.1 KEGG: mex:Mext_2992 hypothetical protein YP_001925866.1 PFAM: histone deacetylase superfamily; KEGG: mex:Mext_2993 histone deacetylase superfamily YP_001925867.1 KEGG: mex:Mext_2995 hypothetical protein YP_001925868.1 PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: mex:Mext_2996 carbamoyl-phosphate synthase L chain ATP-binding YP_001925869.1 KEGG: rru:Rru_A2704 hypothetical protein YP_001925871.1 PFAM: AIG2 family protein; KEGG: mex:Mext_2997 AIG2 family protein YP_001925872.1 PFAM: formate/nitrite transporter; KEGG: acr:Acry_0836 formate/nitrite transporter YP_001925873.1 PFAM: acylphosphatase; KEGG: mex:Mext_2998 acylphosphatase YP_001925874.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: mex:Mext_1328 alpha/beta hydrolase fold-3 domain protein YP_001925875.1 PFAM: protein of unknown function DUF599; KEGG: mex:Mext_2999 protein of unknown function DUF599 YP_001925876.1 KEGG: mex:Mext_3000 hypothetical protein YP_001925877.1 PFAM: protein of unknown function DUF218; KEGG: mex:Mext_3001 protein of unknown function DUF218 YP_001925878.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_3002 glutathione S-transferase domain YP_001925879.1 KEGG: mex:Mext_3003 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: radical SAM domain protein YP_001925880.1 PFAM: tRNA synthetase class II (D K and N); KEGG: mex:Mext_3004 tRNA synthetase class II (D K and N) YP_001925881.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_001925882.1 PFAM: protein of unknown function DUF1624; KEGG: mex:Mext_3006 protein of unknown function DUF1624 YP_001925883.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_3007 cold-shock protein DNA-binding YP_001925884.1 PFAM: protein of unknown function DUF192; KEGG: mex:Mext_3008 protein of unknown function DUF192 YP_001925885.1 involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; part of a complex with BchI, BchD, and BchH YP_001925886.1 KEGG: mex:Mext_3010 magnesium chelatase accessory protein; TIGRFAM: magnesium chelatase accessory protein; PFAM: alpha/beta hydrolase fold YP_001925887.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_3011 phytoene desaturase YP_001925888.1 PFAM: squalene/phytoene synthase; KEGG: mex:Mext_3012 squalene/phytoene synthase YP_001925889.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: mex:Mext_3013 urease accessory protein UreG YP_001925890.1 PFAM: Urease accessory protein UreF; KEGG: mex:Mext_3014 urease accessory protein UreF YP_001925891.1 PFAM: UreE urease accessory domain protein; KEGG: mex:Mext_3015 UreE urease accessory domain protein YP_001925892.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_001925893.1 PFAM: protein of unknown function DUF1003; KEGG: mex:Mext_3017 protein of unknown function DUF1003 YP_001925894.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mex:Mext_3018 metal-dependent phosphohydrolase HD sub domain YP_001925895.1 KEGG: mex:Mext_3019 urease subunit gamma; TIGRFAM: urease subunit beta; urease subunit gamma; PFAM: Urease beta subunit; Urease gamma subunit region YP_001925896.1 PFAM: Urease accessory protein UreD; KEGG: mex:Mext_3020 urease accessory protein UreD YP_001925897.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: mex:Mext_3021 flavin reductase domain protein FMN-binding YP_001925898.1 KEGG: mex:Mext_3022 hypothetical protein YP_001925899.1 TIGRFAM: hydroxyisourate hydrolase; OHCU decarboxylase; PFAM: Transthyretin; Hydroxyisourate hydrolase; KEGG: bja:bll6163 hypothetical protein YP_001925900.1 KEGG: mex:Mext_3025 hypothetical protein YP_001925901.1 KEGG: mex:Mext_3026 hypothetical protein YP_001925902.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3027 NAD-dependent epimerase/dehydratase YP_001925903.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: mex:Mext_3028 nucleotide sugar dehydrogenase YP_001925904.1 KEGG: mex:Mext_3029 hypothetical protein YP_001925906.1 KEGG: mex:Mext_3030 hypothetical protein YP_001925907.1 KEGG: mex:Mext_3031 hypothetical protein YP_001925909.1 TIGRFAM: threonine dehydratase; PFAM: threonine dehydratase domain protein; Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mex:Mext_3032 threonine dehydratase YP_001925910.1 PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_3033 type IV pilus assembly PilZ YP_001925911.1 PFAM: SlyX family protein; KEGG: mex:Mext_3034 SlyX family protein YP_001925912.1 KEGG: mex:Mext_3035 hypothetical protein YP_001925913.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: mex:Mext_3036 RNA polymerase-binding protein DksA YP_001925914.1 KEGG: mex:Mext_3037 hypothetical protein YP_001925915.1 KEGG: bja:bll4266 hypothetical protein YP_001925916.1 KEGG: maq:Maqu_2306 hypothetical protein YP_001925917.1 KEGG: tcx:Tcr_0331 hypothetical protein YP_001925918.1 KEGG: ppg:PputGB1_0517 integrase family protein YP_001925919.1 PFAM: integrase family protein; KEGG: ppg:PputGB1_0516 integrase family protein YP_001925920.1 PFAM: integrase family protein; KEGG: ppg:PputGB1_0515 integrase family protein YP_001925921.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: mex:Mext_3038 membrane bound O-acyl transferase MBOAT family protein YP_001925922.1 KEGG: mex:Mext_3039 hypothetical protein YP_001925923.1 KEGG: mex:Mext_3040 hypothetical protein YP_001925924.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum YP_001925925.1 KEGG: mex:Mext_3042 hypothetical protein YP_001925926.1 KEGG: mex:Mext_3043 hypothetical protein YP_001925927.1 KEGG: rpe:RPE_2353 hypothetical protein YP_001925928.1 KEGG: mex:Mext_3044 hypothetical protein YP_001925929.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod YP_001925930.1 TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: mex:Mext_3046 flagella basal body P-ring formation protein FlgA YP_001925931.1 TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mex:Mext_3047 flagellar basal-body rod protein FlgG YP_001925932.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum YP_001925933.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring YP_001925934.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum YP_001925935.1 KEGG: mex:Mext_3051 hypothetical protein YP_001925936.1 KEGG: mex:Mext_3052 hypothetical protein YP_001925937.1 PFAM: protein of unknown function DUF433; KEGG: pla:Plav_3472 protein of unknown function DUF433 YP_001925938.1 KEGG: pla:Plav_3471 hypothetical protein YP_001925939.1 PFAM: glutathione peroxidase; KEGG: mex:Mext_3053 peroxiredoxin YP_001925940.1 PFAM: Invasion associated locus B family protein; KEGG: mex:Mext_3054 invasion associated locus B family protein YP_001925941.1 TIGRFAM: lytic murein transglycosylase; PFAM: peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_3055 lytic murein transglycosylase YP_001925942.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mex:Mext_3056 NAD(P)H dehydrogenase (quinone) YP_001925943.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mex:Mext_3058 glutathione-dependent formaldehyde-activating GFA YP_001925944.1 PFAM: sodium:dicarboxylate symporter; KEGG: mex:Mext_3059 sodium:dicarboxylate symporter YP_001925945.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_3060 ATP-binding region ATPase domain protein YP_001925946.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: mex:Mext_3061 sigma-54 factor interaction domain-containing protein YP_001925947.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_3062 diguanylate cyclase YP_001925948.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: mex:Mext_3064 glutamyl-tRNA(Gln) amidotransferase, B subunit YP_001925949.1 KEGG: mem:Memar_0194 hypothetical protein YP_001925950.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mex:Mext_3065 cation diffusion facilitator family transporter YP_001925951.1 KEGG: mex:Mext_3066 hypothetical protein YP_001925952.1 KEGG: mex:Mext_3067 hypothetical protein YP_001925953.1 PFAM: monooxygenase FAD-binding; KEGG: mex:Mext_3068 monooxygenase FAD-binding YP_001925954.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step YP_001925955.1 PFAM: DNA polymerase beta domain protein region; KEGG: mex:Mext_3070 hypothetical protein YP_001925956.1 KEGG: mex:Mext_3071 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_001925957.1 KEGG: mex:Mext_3072 conserved hypothetical protein; exported protein YP_001925958.1 KEGG: mex:Mext_3073 hypothetical protein YP_001925959.1 KEGG: mex:Mext_2319 hypothetical protein YP_001925960.1 SMART: tyrosine protein kinase; serine/threonine protein kinase; leucine-rich repeat-containing protein typical subtype; KEGG: mex:Mext_3080 serine/threonine protein kinase YP_001925961.1 PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: mex:Mext_3081 CHAD domain containing protein YP_001925962.1 PFAM: adenylate cyclase; KEGG: mex:Mext_3082 adenylate cyclase YP_001925963.1 KEGG: pde:Pden_2124 hemolysin-type calcium-binding region YP_001925964.1 PFAM: ferredoxin; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_3083 adenylyl cyclase class-3/4/guanylyl cyclase YP_001925965.1 KEGG: gme:Gmet_2448 hypothetical protein YP_001925966.1 KEGG: mex:Mext_0456 hypothetical protein YP_001925967.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient YP_001925968.1 KEGG: mex:Mext_3089 hypothetical protein YP_001925969.1 KEGG: mex:Mext_3090 hypothetical protein YP_001925970.1 PFAM: aminotransferase class I and II; KEGG: mex:Mext_3091 aminotransferase class I and II YP_001925971.1 KEGG: mex:Mext_3092 hypothetical protein YP_001925972.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; poly-beta-hydroxybutyrate polymerase domain protein; KEGG: mex:Mext_3093 poly(R)-hydroxyalkanoic acid synthase, class I YP_001925973.1 TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mex:Mext_3094 sodium/hydrogen exchanger YP_001925974.1 PFAM: regulatory protein LuxR; KEGG: mex:Mext_3095 regulatory protein LuxR YP_001925975.1 KEGG: mex:Mext_3096 glycyl-tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit YP_001925976.1 PFAM: protein of unknown function DUF839; KEGG: mex:Mext_3097 protein of unknown function DUF839 YP_001925977.1 KEGG: mex:Mext_3098 hypothetical protein YP_001925978.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_001925979.1 KEGG: mex:Mext_3100 hypothetical protein YP_001925980.1 KEGG: mex:Mext_3101 hypothetical protein YP_001925981.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_3102 regulatory protein TetR YP_001925982.1 PFAM: protein of unknown function DUF1348; KEGG: mex:Mext_3103 protein of unknown function DUF1348 YP_001925983.1 PFAM: peptidase S49; KEGG: mex:Mext_3105 peptidase S49 YP_001925984.1 KEGG: mex:Mext_2573 hypothetical protein YP_001925985.1 PFAM: methyltransferase small; KEGG: mex:Mext_3106 methyltransferase small YP_001925986.1 KEGG: mex:Mext_3107 hypothetical protein YP_001925987.1 PFAM: polyprenyl synthetase; KEGG: mex:Mext_3108 polyprenyl synthetase YP_001925988.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis YP_001925989.1 PFAM: DNA polymerase beta domain protein region; KEGG: rpe:RPE_4875 DNA polymerase, beta domain protein region YP_001925991.1 PFAM: TPR repeat-containing protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_3111 tetratricopeptide TPR_2 repeat protein YP_001925992.1 KEGG: mex:Mext_3112 hypothetical protein YP_001925993.1 KEGG: mex:Mext_3113 hypothetical protein YP_001925994.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG: bxe:Bxe_B1329 dioxygenase, ferredoxin reductase component YP_001925995.1 KEGG: mex:Mext_3114 hypothetical protein YP_001925996.1 KEGG: mex:Mext_3115 hypothetical protein YP_001925997.1 KEGG: mex:Mext_3116 Nrd protein YP_001925998.1 PFAM: band 7 protein; KEGG: mex:Mext_3117 band 7 protein YP_001925999.1 KEGG: mex:Mext_3118 cyclic peptide transporter; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter; SMART: AAA ATPase YP_001926000.1 KEGG: gdi:GDI0329 hypothetical protein YP_001926001.1 PFAM: PilT protein domain protein; KEGG: gdi:GDI0330 hypothetical protein YP_001926002.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_001926003.1 KEGG: mex:Mext_3120 hypothetical protein YP_001926004.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mex:Mext_3121 threonine aldolase YP_001926005.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_3122 ABC transporter YP_001926006.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3123 major facilitator superfamily MFS_1 YP_001926007.1 PFAM: PRC-barrel domain protein; KEGG: mex:Mext_3124 PRC-barrel domain protein YP_001926008.1 KEGG: mex:Mext_3125 hypothetical protein YP_001926009.1 PFAM: PRC-barrel domain protein; KEGG: mex:Mext_3126 PRC-barrel domain protein YP_001926010.1 PFAM: SWIB/MDM2 domain protein; KEGG: mex:Mext_3127 SWIB/MDM2 domain protein YP_001926011.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3128 short-chain dehydrogenase/reductase SDR YP_001926012.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3129 major facilitator superfamily MFS_1 YP_001926013.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3130 alpha/beta hydrolase fold YP_001926014.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mex:Mext_3131 6-phosphogluconate dehydrogenase NAD-binding YP_001926015.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_3132 glutathione S-transferase domain YP_001926017.1 PFAM: ETC complex I subunit conserved region; KEGG: mex:Mext_3134 ETC complex I subunit conserved region YP_001926018.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mex:Mext_3135 CMP/dCMP deaminase zinc-binding YP_001926019.1 PFAM: radical SAM domain protein; KEGG: mex:Mext_3136 radical SAM domain protein YP_001926020.1 KEGG: mex:Mext_3137 hypothetical protein YP_001926021.1 KEGG: mex:Mext_3138 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001926022.1 KEGG: mex:Mext_3139 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001926023.1 KEGG: mex:Mext_3140 hypothetical protein YP_001926024.1 Converts isocitrate to alpha ketoglutarate YP_001926025.1 KEGG: mex:Mext_3142 hypothetical protein YP_001926026.1 PFAM: formaldehyde-activating enzyme (Fae); KEGG: mex:Mext_3143 formaldehyde-activating enzyme (Fae) YP_001926027.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mex:Mext_3144 RNA methyltransferase, TrmH family, group 1 YP_001926028.1 KEGG: mex:Mext_3145 hypothetical protein YP_001926029.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_3146 alcohol dehydrogenase zinc-binding domain protein YP_001926030.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_3147 chemotaxis sensory transducer YP_001926031.1 KEGG: mex:Mext_3149 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_001926032.1 PFAM: response regulator receiver; KEGG: mex:Mext_3150 response regulator receiver YP_001926033.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mex:Mext_3151 protein of unknown function DUF224 cysteine-rich region domain protein YP_001926034.1 KEGG: mex:Mext_3152 hypothetical protein YP_001926035.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: mex:Mext_3153 alpha/beta hydrolase fold-3 domain protein YP_001926036.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_3154 DEAD/H associated domain protein YP_001926037.1 KEGG: mex:Mext_3155 ICC-like phosphoesterase YP_001926038.1 KEGG: mex:Mext_3156 hypothetical protein YP_001926039.1 PFAM: chloride channel core; KEGG: mex:Mext_3157 chloride channel core YP_001926040.1 PFAM: protein of unknown function DUF1328; KEGG: mex:Mext_3158 protein of unknown function DUF1328 YP_001926041.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3159 short-chain dehydrogenase/reductase SDR YP_001926042.1 KEGG: mex:Mext_3160 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein YP_001926043.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: mex:Mext_3161 transcription antitermination factor NusB YP_001926044.1 KEGG: mex:Mext_3162 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_001926045.1 PFAM: UbiA prenyltransferase; KEGG: mex:Mext_3163 UbiA prenyltransferase YP_001926046.1 PFAM: GtrA family protein; KEGG: mex:Mext_3164 GtrA family protein YP_001926047.1 KEGG: mex:Mext_3165 hypothetical protein YP_001926048.1 TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: mex:Mext_3167 riboflavin synthase, alpha subunit YP_001926049.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: mex:Mext_3168 riboflavin biosynthesis protein RibD YP_001926050.1 PFAM: ATP-cone domain protein; KEGG: mex:Mext_3169 ATP-cone domain protein YP_001926051.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: reh:H16_A3534 transcriptional regulator YP_001926052.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_001926053.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: mex:Mext_3172 H+transporting two-sector ATPase B/B' subunit YP_001926054.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: mex:Mext_3173 H+transporting two-sector ATPase B/B' subunit YP_001926055.1 TIGRFAM: ATP synthase F0 subunit C; PFAM: H+transporting two-sector ATPase C subunit; KEGG: mex:Mext_3174 H+transporting two-sector ATPase C subunit YP_001926056.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 YP_001926057.1 KEGG: mex:Mext_3176 conserved hypothetical proteinn YP_001926058.1 KEGG: mex:Mext_3177 DsbA oxidoreductase YP_001926059.1 PFAM: protein of unknown function DUF1159; KEGG: mex:Mext_3178 protein of unknown function DUF1159 YP_001926060.1 KEGG: mex:Mext_3179 hypothetical protein YP_001926061.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: mex:Mext_3180 A/G-specific adenine glycosylase YP_001926062.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mex:Mext_3181 DNA methylase N-4/N-6 domain protein YP_001926063.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: mex:Mext_3182 rare lipoprotein A YP_001926064.1 KEGG: mex:Mext_3183 hypothetical protein YP_001926065.1 KEGG: mex:Mext_3184 hypothetical protein YP_001926066.1 PFAM: SMC domain protein; ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_3185 ABC transporter YP_001926067.1 PFAM: porin; KEGG: mex:Mext_3186 porin YP_001926068.1 KEGG: mex:Mext_3187 hypothetical protein YP_001926069.1 KEGG: rpc:RPC_4926 hypothetical protein YP_001926070.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_3188 adenylyl cyclase class-3/4/guanylyl cyclase YP_001926071.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: mex:Mext_3189 metal-dependent phosphohydrolase HD sub domain YP_001926072.1 PFAM: lytic transglycosylase; KEGG: mex:Mext_3190 lytic transglycosylase catalytic YP_001926073.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_001926074.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_001926075.1 PFAM: protein of unknown function DUF88; KEGG: mex:Mext_3193 protein of unknown function DUF88 YP_001926076.1 TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: mex:Mext_3194 orotate phosphoribosyltransferase YP_001926077.1 KEGG: mex:Mext_3195 hypothetical protein YP_001926078.1 KEGG: mex:Mext_3196 RelA/SpoT family protein; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region YP_001926079.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits YP_001926080.1 PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: mex:Mext_3198 scaffold protein Nfu/NifU YP_001926081.1 PFAM: peptidase M22 glycoprotease; KEGG: mex:Mext_3199 peptidase M22 glycoprotease YP_001926082.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_3200 GCN5-related N-acetyltransferase YP_001926083.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mex:Mext_3201 phospholipid/glycerol acyltransferase YP_001926084.1 PFAM: MEKHLA domain protein; KEGG: mex:Mext_3202 MEKHLA domain protein YP_001926085.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_001926086.1 PFAM: PhoH family protein; KEGG: mex:Mext_3205 PhoH family protein YP_001926087.1 PFAM: protein of unknown function UPF0054; KEGG: mex:Mext_3206 protein of unknown function UPF0054 YP_001926088.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: mex:Mext_3207 CBS domain containing protein YP_001926089.1 Transfers the fatty acyl group on membrane lipoproteins YP_001926090.1 KEGG: mex:Mext_3209 hypothetical protein YP_001926091.1 PFAM: catalase domain protein; KEGG: mex:Mext_3210 catalase YP_001926092.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3211 LysR substrate-binding YP_001926093.1 TIGRFAM: hypothetical protein AbrB duplication; PFAM: ammonia monooxygenase; KEGG: mex:Mext_3212 hypothetical protein AbrB duplication YP_001926094.1 PFAM: diacylglycerol kinase; KEGG: mex:Mext_3213 diacylglycerol kinase YP_001926095.1 KEGG: mex:Mext_3214 hypothetical protein YP_001926096.1 KEGG: mex:Mext_3215 hypothetical protein YP_001926097.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_3216 metallophosphoesterase YP_001926098.1 KEGG: mex:Mext_3217 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_001926099.1 PFAM: protein of unknown function DUF323; KEGG: mex:Mext_3218 protein of unknown function DUF323 YP_001926100.1 KEGG: mex:Mext_3219 hypothetical protein YP_001926101.1 KEGG: azc:AZC_3135 hypothetical protein YP_001926102.1 PFAM: protein of unknown function DUF779; KEGG: mex:Mext_3221 protein of unknown function DUF779 YP_001926103.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mex:Mext_3222 nitrate reductase YP_001926104.1 TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_3223 uroporphyrin-III C-methyltransferase YP_001926105.1 PFAM: electron transport protein SCO1/SenC; KEGG: mex:Mext_3224 electron transport protein SCO1/SenC YP_001926106.1 KEGG: mex:Mext_3225 glycosyl transferase family 2 YP_001926107.1 PFAM: extracellular solute-binding protein family 3; KEGG: mex:Mext_3226 extracellular solute-binding protein family 3 YP_001926108.1 KEGG: mex:Mext_3227 hypothetical protein YP_001926109.1 KEGG: mex:Mext_3228 hypothetical protein YP_001926110.1 KEGG: mex:Mext_3229 cobalt chelatase, pCobT subunit; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit; SMART: von Willebrand factor type A YP_001926111.1 KEGG: mex:Mext_3230 cobalt chelatase, pCobS small subunit; TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase activities AAA_5 YP_001926112.1 PFAM: heat shock protein DnaJ domain protein; KEGG: mex:Mext_3231 heat shock protein DnaJ domain protein YP_001926113.1 PFAM: BolA family protein; KEGG: mex:Mext_3232 BolA family protein YP_001926114.1 PFAM: Class I peptide chain release factor; KEGG: mex:Mext_3233 class I peptide chain release factor YP_001926115.1 PFAM: protein of unknown function DUF1275; KEGG: mex:Mext_3234 protein of unknown function DUF1275 YP_001926116.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_3235 methyltransferase type 12 YP_001926117.1 KEGG: mex:Mext_3236 mRNA 3-end processing factor YP_001926118.1 PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: mex:Mext_3237 ATP dependent DNA ligase YP_001926119.1 PFAM: protein of unknown function UPF0047; KEGG: mex:Mext_3238 protein of unknown function UPF0047 YP_001926120.1 PFAM: protein of unknown function DUF606; KEGG: mex:Mext_3239 protein of unknown function DUF606 YP_001926121.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sal:Sala_2416 transcriptional regulator, LysR family YP_001926122.1 PFAM: protein of unknown function UPF0057; KEGG: mex:Mext_3240 protein of unknown function UPF0057 YP_001926123.1 PFAM: enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mex:Mext_3241 3-hydroxyacyl-CoA dehydrogenase NAD-binding YP_001926124.1 PFAM: EAL domain protein; KEGG: mex:Mext_3242 EAL domain protein YP_001926125.1 KEGG: mex:Mext_3243 hypothetical protein YP_001926126.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001926127.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mex:Mext_3245 acyl-CoA dehydrogenase domain protein YP_001926128.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_3246 Sel1 domain protein repeat-containing protein YP_001926129.1 KEGG: mex:Mext_3247 hypothetical protein YP_001926130.1 KEGG: mex:Mext_3248 hypothetical protein YP_001926131.1 KEGG: mex:Mext_3249 hypothetical protein YP_001926132.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: mex:Mext_3250 phosphoesterase PA-phosphatase related YP_001926133.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: mex:Mext_3251 oxidoreductase domain protein YP_001926134.1 KEGG: mex:Mext_3252 hypothetical protein YP_001926135.1 PFAM: peptidase M16 domain protein; KEGG: mex:Mext_3253 processing peptidase YP_001926136.1 KEGG: mex:Mext_3254 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_001926137.1 KEGG: mex:Mext_3255 hypothetical protein YP_001926138.1 PFAM: surfeit locus 1 family protein; KEGG: mex:Mext_3256 surfeit locus 1 family protein YP_001926139.1 PFAM: protein of unknown function DUF983; KEGG: mex:Mext_3257 protein of unknown function DUF983 YP_001926140.1 PFAM: cytochrome c oxidase subunit III; KEGG: mex:Mext_3258 cytochrome c oxidase subunit III YP_001926141.1 PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: mex:Mext_3259 cytochrome c oxidase assembly protein CtaG/Cox11 YP_001926142.1 KEGG: mex:Mext_3260 conserved protein CoxF YP_001926143.1 converts protoheme IX and farnesyl diphosphate to heme O YP_001926144.1 KEGG: mex:Mext_3262 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_001926145.1 KEGG: mex:Mext_3263 cytochrome c oxidase, subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region YP_001926146.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: mex:Mext_3264 formate dehydrogenase family accessory protein FdhD YP_001926147.1 KEGG: mex:Mext_3265 exported protein of unknown function YP_001926148.1 PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: mex:Mext_3266 glutamate synthase (ferredoxin) YP_001926149.1 KEGG: gvi:gsr4342 virulence-associated protein VapB homolog YP_001926150.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate YP_001926151.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_3268 beta-lactamase domain protein YP_001926152.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: mex:Mext_3269 ATP-binding region ATPase domain protein YP_001926153.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_3270 response regulator receiver YP_001926154.1 PFAM: protein of unknown function DUF459; KEGG: mex:Mext_3271 protein of unknown function DUF459 YP_001926155.1 TIGRFAM: lytic murein transglycosylase; PFAM: peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_3272 lytic murein transglycosylase YP_001926156.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3273 UDP-glucose 4-epimerase YP_001926157.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; KEGG: mex:Mext_3274 UTP-glucose-1-phosphate uridylyltransferase YP_001926158.1 PFAM: N-formylglutamate amidohydrolase; KEGG: mex:Mext_3275 N-formylglutamate amidohydrolase YP_001926159.1 PFAM: response regulator receiver; KEGG: mex:Mext_3276 response regulator receiver YP_001926160.1 TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: mex:Mext_3277 glutaredoxin 3 YP_001926161.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mex:Mext_3278 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001926162.1 PFAM: protein of unknown function DUF1178; KEGG: mex:Mext_3279 protein of unknown function DUF1178 YP_001926163.1 KEGG: mex:Mext_3280 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001926165.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A; KEGG: mex:Mext_3281 peptide methionine sulfoxide reductase YP_001926166.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_3282 hypothetical protein YP_001926167.1 KEGG: mex:Mext_3283 hypothetical protein YP_001926168.1 KEGG: pde:Pden_0264 hypothetical protein YP_001926169.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm YP_001926170.1 PFAM: PRC-barrel domain protein; KEGG: mex:Mext_3285 PRC-barrel domain protein YP_001926171.1 KEGG: mex:Mext_3286 hypothetical protein YP_001926172.1 PFAM: Na+/H+ antiporter NhaA; KEGG: mex:Mext_3287 Na+/H+ antiporter NhaA YP_001926173.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: mex:Mext_3288 redoxin domain protein YP_001926174.1 TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: mex:Mext_3289 argininosuccinate lyase YP_001926175.1 KEGG: mex:Mext_3290 hypothetical protein YP_001926176.1 KEGG: mex:Mext_3291 hypothetical protein YP_001926177.1 KEGG: mex:Mext_3292 hypothetical protein YP_001926178.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: mex:Mext_3293 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_001926179.1 PFAM: carbamoyltransferase; KEGG: mex:Mext_3294 carbamoyltransferase YP_001926180.1 KEGG: mex:Mext_3295 hypothetical protein YP_001926181.1 KEGG: mex:Mext_3296 haloacid dehalogenase, type II; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: haloacid dehalogenase YP_001926182.1 TIGRFAM: integral hypothetical protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: mex:Mext_3297 integral hypothetical protein MviN YP_001926183.1 PFAM: manganese and iron superoxide dismutase; KEGG: mex:Mext_3298 superoxide dismutase YP_001926184.1 KEGG: mex:Mext_3299 hypothetical protein YP_001926185.1 KEGG: mex:Mext_3300 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; hypothetical protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001926186.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_3301 glycosyl transferase family 2 YP_001926187.1 KEGG: mex:Mext_3302 rhamnosyltransferase YP_001926188.1 PFAM: peptidase M48 Ste24p; KEGG: mex:Mext_3303 peptidase M48 Ste24p YP_001926189.1 KEGG: mex:Mext_3304 hypothetical protein YP_001926190.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_3305 helix-turn-helix domain protein YP_001926191.1 PFAM: S-adenosylmethionine synthetase; KEGG: mex:Mext_3306 methionine adenosyltransferase YP_001926192.1 PFAM: methyltransferase; KEGG: mex:Mext_3307 tRNA (guanine-N(7)-)-methyltransferase YP_001926193.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity YP_001926194.1 PFAM: oxidoreductase molybdopterin binding; KEGG: mex:Mext_3309 oxidoreductase molybdopterin binding YP_001926195.1 KEGG: mex:Mext_3310 transmembrane b-type cytochrome protein YP_001926196.1 KEGG: mex:Mext_3311 hypothetical protein YP_001926197.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_001926198.1 KEGG: mex:Mext_3313 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase YP_001926199.1 PFAM: protein of unknown function DUF205; KEGG: mex:Mext_3314 protein of unknown function DUF205 YP_001926200.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: mex:Mext_3315 DNA protecting protein DprA YP_001926201.1 PFAM: lipolytic protein G-D-S-L family; KEGG: mex:Mext_3316 lipolytic protein G-D-S-L family YP_001926202.1 KEGG: mex:Mext_3317 hypothetical protein YP_001926203.1 PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_3318 ThiJ/PfpI domain protein YP_001926204.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: mex:Mext_3319 Holliday junction resolvase YqgF YP_001926205.1 KEGG: mex:Mext_3320 hypothetical protein YP_001926206.1 KEGG: mex:Mext_3321 hypothetical protein YP_001926207.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: mex:Mext_3322 glutamyl-tRNA(Gln) amidotransferase, C subunit YP_001926208.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_001926209.1 KEGG: mex:Mext_3324 hypothetical protein YP_001926210.1 PFAM: excinuclease ABC subunit C; KEGG: mex:Mext_3325 excinuclease ABC C subunit domain protein YP_001926211.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_3326 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_001926212.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_3327 efflux transporter, RND family, MFP subunit YP_001926213.1 KEGG: mex:Mext_3328 hypothetical protein YP_001926214.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_3329 ErfK/YbiS/YcfS/YnhG family protein YP_001926215.1 PFAM: sugar transferase; KEGG: mes:Meso_0653 sugar transferase YP_001926216.1 PFAM: glycosyl transferase group 1; KEGG: bbt:BBta_1037 glycosyltransferase group 1 family protein YP_001926217.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: nha:Nham_3056 protein-tyrosine kinase YP_001926218.1 PFAM: polysaccharide export protein; KEGG: sme:SMb21073 OMA family outer membrane saccharide export protein, similar to ExoF YP_001926219.1 KEGG: sme:SMb21048 hypothetical hypothetical protein YP_001926220.1 PFAM: glycosyl transferase group 1; KEGG: bbt:BBta_1060 glycosyl transferase group 1 YP_001926221.1 PFAM: glycosyl transferase family 2; KEGG: mes:Meso_2591 glycosyl transferase, family 2 YP_001926222.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: ret:RHE_CH03386 probable exopolysaccharide polymerization/transport protein YP_001926223.1 KEGG: mes:Meso_2576 polysaccharide pyruvyl transferase YP_001926224.1 PFAM: glycosyl transferase group 1; KEGG: rle:RL3818 glycosyl transferase YP_001926225.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: lsl:LSL_0924 maltose O-acetyltransferase YP_001926226.1 PFAM: glycoside hydrolase family 16; KEGG: gdi:GDI1160 endo-1,3-1,4-beta-glycanase protein YP_001926227.1 KEGG: gdi:GDI2496 glycosyl transferase YP_001926228.1 PFAM: polysaccharide biosynthesis protein; KEGG: xac:XAC2577 GumJ protein YP_001926229.1 KEGG: mlo:mll8118 hypothetical protein YP_001926232.1 PFAM: glycoside hydrolase family 16; Hemolysin-type calcium-binding region; KEGG: rle:RL3815 glycosyl hydrolase YP_001926233.1 TIGRFAM: methyltransferase FkbM family; KEGG: net:Neut_2142 methyltransferase FkbM family protein YP_001926234.1 KEGG: mex:Mext_4793 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase; cupin YP_001926235.1 PFAM: response regulator receiver; KEGG: rpd:RPD_3796 response regulator receiver YP_001926236.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: mex:Mext_4125 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_001926237.1 PFAM: cyclase/dehydrase; carbon monoxide dehydrogenase subunit G; KEGG: mex:Mext_1283 carbon monoxide dehydrogenase subunit G YP_001926238.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_1284 ABC transporter YP_001926239.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_1285 ABC transporter YP_001926240.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_1286 inner-membrane translocator YP_001926241.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_1287 inner-membrane translocator YP_001926242.1 PFAM: extracellular ligand-binding receptor; KEGG: mex:Mext_1288 extracellular ligand-binding receptor YP_001926243.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_1289 carbon-monoxide dehydrogenase (acceptor) YP_001926244.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_1290 (2Fe-2S)-binding domain protein YP_001926245.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: mex:Mext_1291 molybdopterin dehydrogenase FAD-binding YP_001926246.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_1292 regulatory protein TetR YP_001926247.1 aliphatic amidase; catalyzes the hydrolysis of short-chain aliphatic amides to their organic acids and can also transfer the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates YP_001926248.1 PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_3373 carbohydrate-selective porin OprB YP_001926249.1 TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB; KEGG: mex:Mext_3374 regulatory protein, FmdB family YP_001926250.1 PFAM: acetamidase/formamidase; KEGG: mex:Mext_3375 formamidase YP_001926251.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3376 alpha/beta hydrolase fold YP_001926252.1 KEGG: mex:Mext_3377 UreA ABC transporter, ATP-binding protein UrtE; TIGRFAM: urea ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: AAA ATPase YP_001926253.1 TIGRFAM: urea ABC transporter ATP-binding protein; PFAM: ABC transporter; KEGG: mex:Mext_3378 UreA ABC transporter, ATP-binding protein UrtD YP_001926254.1 TIGRFAM: urea ABC transporter permease; PFAM: inner-membrane translocator; KEGG: mex:Mext_3379 UreA ABC transporter, permease protein UrtC YP_001926255.1 TIGRFAM: urea ABC transporter permease; PFAM: inner-membrane translocator; KEGG: mex:Mext_3380 UreA ABC transporter, permease protein UrtB YP_001926256.1 KEGG: mex:Mext_3381 ABC transporter substrate-binding protein YP_001926257.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_3382 ATP-binding region ATPase domain protein YP_001926258.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_3383 response regulator receiver YP_001926259.1 PFAM: Invasion associated locus B family protein; KEGG: mex:Mext_3384 invasion associated locus B family protein YP_001926260.1 catalyzes the formation of precorrin 6x from precorrin 5 YP_001926261.1 KEGG: mex:Mext_3386 hypothetical protein YP_001926262.1 KEGG: mex:Mext_3387 hypothetical protein YP_001926263.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mex:Mext_3388 cobyrinic acid ac-diamide synthase YP_001926264.1 KEGG: mex:Mext_3389 hypothetical protein YP_001926265.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: mex:Mext_3390 rare lipoprotein A YP_001926266.1 KEGG: mex:Mext_3391 hypothetical protein YP_001926267.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: mex:Mext_3392 iron-sulfur cluster assembly accessory protein YP_001926268.1 KEGG: mex:Mext_3393 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_001926269.1 KEGG: mex:Mext_3394 hypothetical protein YP_001926270.1 PFAM: thioesterase superfamily protein; KEGG: mex:Mext_3395 thioesterase superfamily protein YP_001926271.1 KEGG: mex:Mext_3396 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase YP_001926272.1 PFAM: sporulation domain protein; KEGG: mex:Mext_3397 sporulation domain protein YP_001926273.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: mex:Mext_3398 beta-N-acetylhexosaminidase YP_001926274.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_001926275.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: mex:Mext_3400 twin-arginine translocation protein, TatB subunit YP_001926276.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: mex:Mext_3401 sec-independent protein translocase, TatC subunit YP_001926277.1 KEGG: mex:Mext_3402 hypothetical protein YP_001926278.1 TIGRFAM: PAS sensor protein; PFAM: hypothetical protein; KEGG: mex:Mext_4859 hypothetical protein YP_001926280.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3403 major facilitator superfamily MFS_1 YP_001926281.1 PFAM: NADPH-dependent FMN reductase; KEGG: mex:Mext_3404 NADPH-dependent FMN reductase YP_001926282.1 KEGG: mex:Mext_3405 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3 YP_001926283.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3406 binding-protein-dependent transport systems inner membrane component YP_001926284.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_3407 ABC transporter YP_001926285.1 PFAM: monooxygenase; KEGG: mex:Mext_3408 alkanesulfonate monooxygenase YP_001926286.1 KEGG: mex:Mext_3409 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3 YP_001926287.1 KEGG: mex:Mext_3410 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3 YP_001926288.1 KEGG: mex:Mext_3411 pyridine nucleotide-disulfide oxidoreductase family YP_001926289.1 KEGG: mex:Mext_3412 hypothetical protein YP_001926290.1 KEGG: mex:Mext_3413 conserved hypothetical proteinn YP_001926291.1 KEGG: mex:Mext_3414 hypothetical protein YP_001926292.1 PFAM: transglutaminase; transglutaminase; KEGG: mex:Mext_3415 transglutaminase YP_001926293.1 PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mex:Mext_3416 protein of unknown function DUF404 YP_001926294.1 PFAM: transglutaminase; transglutaminase; KEGG: mex:Mext_3417 transglutaminase YP_001926295.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_3418 regulatory protein TetR YP_001926296.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3419 short-chain dehydrogenase/reductase SDR YP_001926297.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3420 major facilitator superfamily MFS_1 YP_001926298.1 KEGG: mex:Mext_3421 hypothetical protein YP_001926299.1 PFAM: beta-lactamase; KEGG: mex:Mext_3422 beta-lactamase YP_001926300.1 PFAM: aldehyde Dehydrogenase_; KEGG: mex:Mext_3423 aldehyde dehydrogenase YP_001926302.1 KEGG: msu:MS2001 hypothetical protein YP_001926303.1 PFAM: protein of unknown function DUF1486; KEGG: cps:CPS_0791 hypothetical protein YP_001926304.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mex:Mext_3425 Orn/DAP/Arg decarboxylase 2 YP_001926305.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_3426 AMP-dependent synthetase and ligase YP_001926306.1 KEGG: mex:Mext_3427 hypothetical protein YP_001926307.1 PFAM: DoxX family protein; KEGG: mex:Mext_3428 DoxX family protein YP_001926308.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3429 major facilitator superfamily MFS_1 YP_001926309.1 KEGG: mex:Mext_3430 conserved hypothetical protein; exported protein YP_001926310.1 PFAM: amidohydrolase; KEGG: mex:Mext_3431 adenine deaminase YP_001926311.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: mex:Mext_3432 ribosomal RNA methyltransferase RrmJ/FtsJ YP_001926312.1 KEGG: ppg:PputGB1_2594 calcium/calmodulin dependent protein kinase II association-domain protein YP_001926313.1 PFAM: Ppx/GppA phosphatase; KEGG: mex:Mext_3433 Ppx/GppA phosphatase YP_001926314.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_3434 glycosyl transferase family 2 YP_001926315.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mex:Mext_3435 phospholipid/glycerol acyltransferase YP_001926316.1 TIGRFAM: phytoene desaturase; PFAM: FAD dependent oxidoreductase; KEGG: mex:Mext_3436 phytoene desaturase YP_001926317.1 PFAM: glutamine amidotransferase class-I; KEGG: mex:Mext_3437 glutamine amidotransferase class-I YP_001926318.1 PFAM: ABC transporter; KEGG: mex:Mext_3438 ABC transporter YP_001926319.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_3439 ABC transporter YP_001926320.1 KEGG: mex:Mext_3440 hypothetical protein YP_001926321.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_3441 phytoene desaturase YP_001926322.1 KEGG: mex:Mext_3442 hypothetical protein YP_001926323.1 KEGG: bra:BRADO4573 hypothetical protein YP_001926324.1 KEGG: rpd:RPD_3080 hypothetical protein YP_001926325.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mex:Mext_3443 tRNA/rRNA methyltransferase (SpoU) YP_001926326.1 PFAM: MaoC domain protein dehydratase; KEGG: mex:Mext_3444 MaoC domain protein dehydratase YP_001926327.1 PFAM: cation efflux protein; KEGG: mex:Mext_3445 cation efflux protein YP_001926328.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_3446 metallophosphoesterase YP_001926329.1 KEGG: mex:Mext_3447 hypothetical protein YP_001926330.1 KEGG: mex:Mext_3448 hypothetical protein YP_001926331.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_3449 glutathione S-transferase domain YP_001926332.1 KEGG: mex:Mext_3450 hypothetical protein YP_001926333.1 PFAM: amidinotransferase; KEGG: mex:Mext_3451 non-specific serine/threonine protein kinase YP_001926334.1 TIGRFAM: hypothetical protein; PFAM: conserved hypothetical protein; KEGG: mex:Mext_3452 hypothetical protein YP_001926335.1 PFAM: toluene tolerance family protein; KEGG: mex:Mext_3453 toluene tolerance family protein YP_001926337.1 TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; PFAM: glycosyl transferase family 2; KEGG: mex:Mext_3454 glucosyltransferase YP_001926338.1 KEGG: mex:Mext_3455 hopanoid biosynthesis associated radical SAM protein HpnJ; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001926339.1 TIGRFAM: hopanoid biosynthesis associated protein HpnK; PFAM: YdjC family protein; KEGG: mex:Mext_3456 hopanoid biosynthesis associated protein HpnK YP_001926340.1 KEGG: mex:Mext_3457 hypothetical protein YP_001926341.1 TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: mex:Mext_3458 hopanoid biosynthesis associated RND transporter like protein HpnN YP_001926342.1 TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: radical SAM domain protein; KEGG: mex:Mext_3460 hopanoid biosynthesis associated radical SAM protein HpnH YP_001926343.1 KEGG: mex:Mext_3461 hypothetical protein YP_001926344.1 PFAM: polysaccharide export protein; KEGG: mex:Mext_3462 polysaccharide export protein YP_001926345.1 KEGG: mex:Mext_3463 carbohydrate kinase, thermoresistant glucokinase family; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase YP_001926346.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; haloacid dehalogenase type 3; KEGG: mex:Mext_3464 Cof-like hydrolase YP_001926347.1 PFAM: lytic transglycosylase; KEGG: mex:Mext_3465 lytic transglycosylase catalytic YP_001926348.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_001926349.1 KEGG: mex:Mext_3467 hypothetical protein YP_001926350.1 TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: mex:Mext_3468 polyhydroxyalkanoate synthesis repressor PhaR YP_001926351.1 KEGG: mex:Mext_3469 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_001926352.1 TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3470 acetoacetyl-CoA reductase YP_001926353.1 acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA YP_001926354.1 PFAM: peptidase M29 aminopeptidase II; KEGG: mex:Mext_3472 peptidase M29 aminopeptidase II YP_001926355.1 KEGG: mex:Mext_3473 hypothetical protein YP_001926356.1 PFAM: FAD linked oxidase domain protein; KEGG: mex:Mext_3474 FAD linked oxidase domain protein YP_001926357.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mex:Mext_3475 fumarylacetoacetate (FAA) hydrolase YP_001926358.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_3476 NUDIX hydrolase YP_001926360.1 KEGG: bja:blr6665 hypothetical protein YP_001926361.1 PFAM: heat shock protein Hsp20; KEGG: mex:Mext_4263 heat shock protein HSP20 YP_001926362.1 PFAM: heat shock protein Hsp20; KEGG: ret:RHE_CH01245 probable molecular chaperone small heat shock protein, HSP20 family YP_001926363.1 KEGG: mex:Mext_4264 hypothetical protein YP_001926365.1 PFAM: ETC complex I subunit conserved region; KEGG: oan:Oant_4634 ETC complex I subunit conserved region YP_001926366.1 KEGG: smd:Smed_3806 hypothetical protein YP_001926367.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_3327 efflux transporter, RND family, MFP subunit YP_001926368.1 KEGG: oan:Oant_4460 hypothetical protein YP_001926369.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2424 transposase, IS4 YP_001926370.1 KEGG: msm:MSMEG_2841 monooxygenase YP_001926371.1 KEGG: gdi:GDI2891 ubiquitin-activating enzyme YP_001926372.1 KEGG: bja:blr1671 hypothetical protein YP_001926373.1 KEGG: bja:blr1670 hypothetical protein YP_001926374.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: gdi:GDI2891 ubiquitin-activating enzyme YP_001926375.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: xau:Xaut_1291 integral membrane sensor signal transduction histidine kinase YP_001926376.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase activities AAA_5; SMART: AAA ATPase; KEGG: xau:Xaut_1292 two component, sigma54 specific, transcriptional regulator, fis family YP_001926377.1 PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_1995 MFS permease-like protein YP_001926378.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pde:Pden_1171 TonB-dependent receptor YP_001926379.1 KEGG: nwi:Nwi_0942 hypothetical protein YP_001926380.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: swi:Swit_1193 cytochrome-c peroxidase YP_001926381.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc02523 transcription regulator protein YP_001926382.1 Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen, nitrate, sulphate or fumarate YP_001926383.1 PFAM: HPP family protein?; KEGG: pde:Pden_1160 HPP family protein+B94 YP_001926384.1 KEGG: pau:PA14_42030 hypothetical protein YP_001926385.1 KEGG: rru:Rru_A1054 hypothetical protein YP_001926386.1 TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein LysR; KEGG: mlo:mll1462 probable molybdenum transport regulator MopA YP_001926387.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: acr:Acry_1230 molybdenum cofactor synthesis domain protein YP_001926388.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc03196 molybdate-binding periplasmic ABC transporter protein YP_001926389.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll1464 molybdate ABC transporter permease protein YP_001926390.1 KEGG: mex:Mext_3635 molybdate ABC transporter, ATPase subunit; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter; TOBE domain protein; SMART: AAA ATPase YP_001926391.1 PFAM: TOBE domain protein; KEGG: mex:Mext_2622 TOBE domain protein YP_001926393.1 PFAM: transposase mutator type; KEGG: swi:Swit_4911 transposase, mutator type YP_001926394.1 KEGG: bbt:BBta_6745 hypothetical protein YP_001926395.1 KEGG: mex:Mext_0305 SMC domain protein YP_001926396.1 PFAM: HipA domain protein; KEGG: nwi:Nwi_2868 hypothetical protein YP_001926397.1 PFAM: helix-turn-helix domain protein; KEGG: cak:Caul_5342 transcriptional regulator, XRE family YP_001926398.1 KEGG: mag:amb1687 ATP-dependent Zn protease YP_001926399.1 KEGG: pde:Pden_3281 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001926402.1 KEGG: mex:Mext_4264 hypothetical protein YP_001926403.1 PFAM: heat shock protein Hsp20; KEGG: ret:RHE_CH01245 probable molecular chaperone small heat shock protein, HSP20 family YP_001926404.1 PFAM: heat shock protein Hsp20; KEGG: mex:Mext_4263 heat shock protein HSP20 YP_001926405.1 PFAM: thioredoxin; KEGG: sal:Sala_0405 thioredoxin YP_001926406.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: rpc:RPC_2288 signal transduction histidine kinase YP_001926407.1 KEGG: mex:Mext_2346 ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA; Clp domain protein; ATPase activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase YP_001926408.1 KEGG: sme:SMc01759 hypothetical protein YP_001926409.1 KEGG: ret:RHE_CH01246 hypothetical protein YP_001926410.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: rbo:A1I_04465 sigma(54) modulation protein YP_001926411.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2424 transposase, IS4 YP_001926412.1 KEGG: bja:blr3866 transposase YP_001926413.1 PFAM: glutaredoxin; KEGG: sme:SMa0280 hypothetical protein YP_001926416.1 KEGG: mex:Mext_3394 hypothetical protein YP_001926417.1 PFAM: PRC-barrel domain protein; KEGG: atc:AGR_C_3639 hypothetical protein YP_001926418.1 KEGG: mex:Mext_3786 hypothetical protein YP_001926420.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; hypothetical protein; KEGG: rpa:RPA1490 bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB4 YP_001926421.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rpc:RPC_3790 two component transcriptional regulator, LuxR family YP_001926422.1 KEGG: rpb:RPB_1020 hypothetical protein YP_001926423.1 KEGG: ajs:Ajs_2506 MgtC/SapB transporter YP_001926424.1 PFAM: CBS domain containing protein; peptidase M50; KEGG: xau:Xaut_1988 peptidase M50 YP_001926426.1 KEGG: bja:blr6174 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; ATPase AAA; ATPase activities AAA_5; SMART: AAA ATPase YP_001926427.1 KEGG: bja:blr6173 hypothetical protein YP_001926428.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2424 transposase, IS4 YP_001926429.1 KEGG: swi:Swit_5307 hypothetical protein YP_001926430.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: bbt:BBta_7804 heat shock protein-DnaJ-like protein YP_001926431.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2424 transposase, IS4 YP_001926432.1 KEGG: mex:Mext_4382 hypothetical protein YP_001926433.1 KEGG: mex:Mext_0356 hypothetical protein YP_001926434.1 KEGG: mex:Mext_0357 hypothetical protein YP_001926436.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_1041 helix-turn-helix domain protein YP_001926438.1 KEGG: nha:Nham_4014 ISSpo6, transposase orf A YP_001926439.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3365 LysR substrate-binding YP_001926440.1 PFAM: extracellular ligand-binding receptor; KEGG: mex:Mext_3366 extracellular ligand-binding receptor YP_001926441.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_3367 inner-membrane translocator YP_001926442.1 PFAM: inner-membrane translocator; ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_3368 ABC transporter YP_001926443.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_3369 ABC transporter YP_001926444.1 PFAM: cyclase family protein; KEGG: mex:Mext_3370 cyclase family protein YP_001926445.1 PFAM: amidase; KEGG: mex:Mext_3371 amidase YP_001926446.1 KEGG: mex:Mext_1704 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001926447.1 KEGG: mpt:Mpe_A3487 nitrate transporter component, NrtA YP_001926448.1 KEGG: acr:Acry_1079 hypothetical protein YP_001926450.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gbe:GbCGDNIH1_1930 transcriptional regulators, LysR family YP_001926451.1 PFAM: transposase mutator type; KEGG: swi:Swit_4911 transposase, mutator type YP_001926452.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_0933 binding-protein-dependent transport systems inner membrane component YP_001926453.1 KEGG: bra:BRADO4296 insertion element (IS) transposase YP_001926454.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rpb:RPB_0935 ABC transporter YP_001926455.1 KEGG: acr:Acry_1079 hypothetical protein YP_001926456.1 KEGG: rxy:Rxyl_2314 ScnA-like protein YP_001926457.1 PFAM: nitrile hydratase alpha chain; KEGG: rxy:Rxyl_2315 nitrile hydratase, alpha subunit YP_001926458.1 KEGG: rpb:RPB_2835 hypothetical protein YP_001926459.1 KEGG: mlo:mll9619 hypothetical protein YP_001926460.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold-4 domain protein; KEGG: mex:Mext_1455 PAS sensor protein YP_001926461.1 KEGG: xcb:XC_1686 histidine kinase/response regulator hybrid protein; TIGRFAM: PAS sensor protein; PFAM: hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001926462.1 KEGG: nwi:Nwi_2412 ISBm1, transposase orfA YP_001926463.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_4051 PAS sensor protein YP_001926464.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; KEGG: mex:Mext_0018 ATP-binding region ATPase domain protein YP_001926465.1 KEGG: mex:Mext_0663 DNA-binding protein YP_001926466.1 PFAM: protein of unknown function DUF892; KEGG: mex:Mext_2776 protein of unknown function DUF892 YP_001926468.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpc:RPC_2858 TonB-dependent siderophore receptor YP_001926469.1 KEGG: blo:BL0924 hypothetical protein YP_001926470.1 KEGG: mex:Mext_2925 hypothetical protein YP_001926471.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_2926 ABC transporter YP_001926472.1 PFAM: ABC transporter permease; KEGG: mex:Mext_2927 ABC transporter permease YP_001926473.1 PFAM: periplasmic binding protein; KEGG: mex:Mext_2928 periplasmic binding protein YP_001926474.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bbt:BBta_6080 TonB-dependent receptor YP_001926475.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_4886 TonB-dependent siderophore receptor YP_001926476.1 PFAM: extracellular solute-binding protein family 5; KEGG: pde:Pden_1341 extracellular solute-binding protein, family 5 YP_001926477.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_1342 binding-protein-dependent transport systems inner membrane component YP_001926478.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_4003 binding-protein-dependent transport systems inner membrane component YP_001926479.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: pde:Pden_1344 ABC transporter YP_001926480.1 PFAM: glutathione S-transferase domain; KEGG: spe:Spro_2221 glutathione S-transferase domain YP_001926481.1 PFAM: helix-turn-helix HxlR type; KEGG: bxe:Bxe_A1776 transcriptional regulator YP_001926482.1 PFAM: transposase IS3/IS911 family protein; KEGG: azc:AZC_3263 transposase YP_001926483.1 PFAM: integrase catalytic region; KEGG: azc:AZC_1931 transposase YP_001926484.1 PFAM: regulatory protein TetR; KEGG: gvi:glr3170 TetR family transcriptional regulatory protein YP_001926485.1 PFAM: carboxymuconolactone decarboxylase; KEGG: mva:Mvan_0928 carboxymuconolactone decarboxylase YP_001926486.1 KEGG: dra:DR_A0202 superoxide dismutase (sodC), Cu-Zn family YP_001926487.1 PFAM: glutathione S-transferase domain; KEGG: swi:Swit_4250 glutathione S-transferase, N-terminal domain YP_001926488.1 KEGG: azc:AZC_0313 hypothetical protein YP_001926489.1 KEGG: rle:RL2912 hypothetical protein YP_001926490.1 PFAM: transposase IS4 family protein; KEGG: ccr:CC_1796 hypothetical protein YP_001926491.1 KEGG: pna:Pnap_2639 hypothetical protein YP_001926492.1 KEGG: bja:bll6187 hypothetical protein YP_001926493.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: bja:blr5280 similar to two-component sensor histidine kinase YP_001926494.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bja:blr5281 two-component response regulator YP_001926495.1 KEGG: mex:Mext_3583 hypothetical protein YP_001926496.1 KEGG: mex:Mext_3515 hypothetical protein YP_001926497.1 KEGG: mlo:mlr3136 hypothetical protein YP_001926498.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bbt:BBta_0859 transcriptional regulator protein, Fnr/CRP family YP_001926499.1 PFAM: helix-turn-helix domain protein; KEGG: pde:Pden_2403 transcriptional regulator, XRE family YP_001926502.1 PFAM: peptidase M41; ATPase AAA; SMART: AAA ATPase; KEGG: mag:amb1687 ATP-dependent Zn protease YP_001926503.1 KEGG: rpe:RPE_2440 hypothetical protein YP_001926504.1 PFAM: transposase IS3/IS911 family protein; KEGG: azc:AZC_3263 transposase YP_001926505.1 PFAM: transposase IS4 family protein; KEGG: bja:bll1823 transposase YP_001926506.1 PFAM: resolvase; recombinase; KEGG: mes:Meso_2219 recombinase YP_001926507.1 PFAM: resolvase; recombinase; KEGG: nha:Nham_3864 recombinase YP_001926511.1 PFAM: protein of unknown function DUF433; KEGG: cak:Caul_2019 protein of unknown function DUF433 YP_001926512.1 KEGG: ret:RHE_PB00085 plasmid stabilization protein YP_001926514.1 KEGG: bbt:BBta_1245 hypothetical protein YP_001926515.1 PFAM: integrase family protein; KEGG: sal:Sala_2535 phage integrase YP_001926516.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_2809 TPR repeat-containing protein YP_001926517.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mex:Mext_3477 DegT/DnrJ/EryC1/StrS aminotransferase YP_001926518.1 KEGG: ava:Ava_2391 hypothetical protein YP_001926519.1 PFAM: protein of unknown function DUF201; KEGG: ava:Ava_2392 carbamoylphosphate synthase large subunit short form YP_001926520.1 KEGG: nwi:Nwi_2900 hypothetical protein YP_001926521.1 KEGG: mex:Mext_0785 hypothetical protein YP_001926522.1 SMART: cyclic nucleotide-binding; KEGG: mex:Mext_0784 hypothetical protein YP_001926524.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_3480 cyclic nucleotide-binding YP_001926525.1 KEGG: mex:Mext_3481 hypothetical protein YP_001926526.1 KEGG: mex:Mext_3482 hypothetical protein YP_001926527.1 KEGG: mex:Mext_3483 hypothetical protein YP_001926528.1 PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3484 acyl-CoA dehydrogenase type 2 domain YP_001926529.1 PFAM: OsmC family protein; KEGG: mex:Mext_3485 OsmC family protein YP_001926530.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3486 binding-protein-dependent transport systems inner membrane component YP_001926531.1 KEGG: mex:Mext_3487 twin-arginine translocation pathway signal YP_001926532.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_3488 ABC transporter YP_001926533.1 PFAM: carbohydrate-selective porin OprB; KEGG: mex:Mext_3489 carbohydrate-selective porin OprB YP_001926534.1 KEGG: mex:Mext_3490 monooxygenase YP_001926535.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_3491 ABC transporter YP_001926536.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_3492 inner-membrane translocator YP_001926537.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_3493 inner-membrane translocator YP_001926538.1 KEGG: mex:Mext_3494 hypothetical protein YP_001926539.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_3495 ABC transporter YP_001926540.1 PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3496 acyl-CoA dehydrogenase type 2 domain YP_001926541.1 KEGG: mex:Mext_0541 hypothetical protein YP_001926542.1 PFAM: flagellin hook IN repeat protein; KEGG: rpa:RPA2297 flagellin YP_001926543.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bbt:BBta_5602 transcriptional regulatory protein, AraC/XylS family YP_001926544.1 PFAM: heat shock protein Hsp20; KEGG: mex:Mext_3498 heat shock protein HSP20 YP_001926545.1 PFAM: UspA domain protein; KEGG: mex:Mext_3500 UspA domain protein YP_001926546.1 KEGG: mex:Mext_3501 hypothetical protein YP_001926547.1 PFAM: UspA domain protein; KEGG: mex:Mext_1355 UspA domain protein YP_001926548.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: ret:RHE_PD00022 hypothetical protein YP_001926549.1 KEGG: mex:Mext_3503 hypothetical protein YP_001926550.1 PFAM: UspA domain protein; KEGG: mex:Mext_3504 UspA domain protein YP_001926551.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_3505 regulatory protein Crp YP_001926552.1 PFAM: response regulator receiver; KEGG: bja:bll2758 two-component response regulator YP_001926553.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mex:Mext_3506 response regulator receiver YP_001926554.1 KEGG: mex:Mext_3507 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001926555.1 PFAM: UspA domain protein; KEGG: mex:Mext_3508 UspA domain protein YP_001926556.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mex:Mext_3509 metal-dependent phosphohydrolase HD sub domain YP_001926557.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: mex:Mext_3510 ATP-binding region ATPase domain protein YP_001926558.1 KEGG: mex:Mext_3511 hypothetical protein YP_001926559.1 KEGG: mex:Mext_3512 TadE family protein YP_001926560.1 PFAM: TadE family protein; KEGG: mex:Mext_3513 TadE family protein YP_001926561.1 catalyzes the hydrolysis of allophanate YP_001926562.1 TIGRFAM: urea amidolyase; urea carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; allophanate hydrolase subunit 2; allophanate hydrolase subunit 1; carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mex:Mext_3722 UreA carboxylase YP_001926563.1 KEGG: mex:Mext_3723 hypothetical protein YP_001926564.1 KEGG: mex:Mext_3724 hypothetical protein YP_001926565.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: mex:Mext_3725 protein of unknown function DUF861 cupin_3 YP_001926566.1 TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region; KEGG: mex:Mext_3726 glutamine synthetase, type III YP_001926567.1 PFAM: creatininase; KEGG: mex:Mext_3727 creatininase YP_001926568.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_3728 ABC transporter YP_001926569.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3729 binding-protein-dependent transport systems inner membrane component YP_001926570.1 KEGG: mex:Mext_3730 ABC transporter substrate-binding protein YP_001926571.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3626 short-chain dehydrogenase/reductase SDR YP_001926572.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3628 alpha/beta hydrolase fold YP_001926573.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: afm:AFUA_6G11530 DUF636 domain protein YP_001926574.1 KEGG: mex:Mext_3629 GAF domain protein YP_001926575.1 KEGG: mex:Mext_3630 hypothetical protein YP_001926576.1 KEGG: mex:Mext_3631 hypothetical protein YP_001926577.1 KEGG: mex:Mext_3632 hypothetical protein YP_001926578.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3633 molybdate ABC transporter, inner membrane subunit YP_001926579.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_3634 glutathione S-transferase domain YP_001926580.1 KEGG: mex:Mext_3635 molybdate ABC transporter, ATPase subunit; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter; TOBE domain protein; SMART: AAA ATPase YP_001926581.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_3888 RNA polymerase sigma factor, sigma-70 family YP_001926582.1 KEGG: mex:Mext_3889 hypothetical protein YP_001926583.1 PFAM: beta-Ig-H3/fasciclin; KEGG: mex:Mext_3627 beta-Ig-H3/fasciclin YP_001926584.1 KEGG: mex:Mext_3637 hypothetical protein YP_001926585.1 KEGG: mex:Mext_3638 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA YP_001926586.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin YP_001926587.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3642 alpha/beta hydrolase fold YP_001926588.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: mex:Mext_3643 sulphate transporter YP_001926589.1 KEGG: mex:Mext_4777 adenylyl cyclase class-3/4/guanylyl cyclase YP_001926590.1 PFAM: LrgB family protein; KEGG: mex:Mext_3644 LrgB family protein YP_001926591.1 PFAM: LrgA family protein; KEGG: mex:Mext_3645 LrgA family protein YP_001926592.1 PFAM: protein of unknown function DUF1332; KEGG: mex:Mext_3646 protein of unknown function DUF1332 YP_001926593.1 PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: mex:Mext_3648 organic solvent tolerance protein YP_001926594.1 PFAM: permease YjgP/YjgQ family protein; KEGG: mex:Mext_3649 permease YjgP/YjgQ family protein YP_001926595.1 PFAM: permease YjgP/YjgQ family protein; KEGG: mex:Mext_3650 permease YjgP/YjgQ family protein YP_001926596.1 TIGRFAM: addiction module antidote protein; KEGG: mar:MAE_14720 hypothetical protein YP_001926597.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: azc:AZC_0871 hypothetical protein YP_001926598.1 PFAM: plasmid maintenance system killer; KEGG: bja:bsl3012 hypothetical protein YP_001926599.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: mex:Mext_3651 leucyl aminopeptidase YP_001926600.1 KEGG: mex:Mext_3652 hypothetical protein YP_001926601.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_3653 AMP-dependent synthetase and ligase YP_001926602.1 PFAM: MscS Mechanosensitive ion channel; KEGG: mex:Mext_3654 MscS mechanosensitive ion channel YP_001926603.1 PFAM: DSBA oxidoreductase; KEGG: mex:Mext_3655 DsbA oxidoreductase YP_001926604.1 KEGG: mex:Mext_3656 metal dependent phophohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_001926605.1 PFAM: phosphate-selective porin O and P; KEGG: mex:Mext_3657 phosphate-selective porin O and P YP_001926606.1 PFAM: aminotransferase class I and II; KEGG: mex:Mext_3658 aminotransferase class I and II YP_001926607.1 KEGG: mpa:MAP3817c hypothetical protein YP_001926608.1 TIGRFAM: ribonuclease, Rne/Rng family; KEGG: mex:Mext_3659 ribonuclease, Rne/Rng family YP_001926609.1 KEGG: mex:Mext_3660 hypothetical protein YP_001926610.1 PFAM: cell wall hydrolase/autolysin; KEGG: mex:Mext_3661 N-acetylmuramoyl-L-alanine amidase YP_001926611.1 KEGG: mex:Mext_3662 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_001926612.1 PFAM: monooxygenase; KEGG: mex:Mext_3663 alkanesulfonate monooxygenase YP_001926613.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3664 acyl-CoA dehydrogenase type 2 domain YP_001926614.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_3665 (2Fe-2S)-binding domain protein YP_001926615.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mex:Mext_3666 molybdopterin dehydrogenase FAD-binding YP_001926616.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_3667 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001926617.1 KEGG: mex:Mext_3668 hypothetical protein YP_001926618.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: mex:Mext_3669 xanthine/uracil/vitamin C permease YP_001926620.1 PFAM: monooxygenase; KEGG: mex:Mext_3670 luciferase family protein YP_001926621.1 KEGG: mex:Mext_3671 hypothetical protein YP_001926622.1 KEGG: mex:Mext_3673 phosphohydrolase (DHH superfamily)-like protein YP_001926623.1 involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans YP_001926624.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space YP_001926625.1 KEGG: oan:Oant_4496 transposase IS116/IS110/IS902 family protein YP_001926626.1 PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: bwe:BcerKBAB4_0259 glycosyl transferase family 2 YP_001926627.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: bce:BC0313 methyltransferase YP_001926628.1 PFAM: transposase mutator type; KEGG: swi:Swit_4911 transposase, mutator type YP_001926629.1 KEGG: bja:blr3866 transposase YP_001926630.1 PFAM: transposase IS4 family protein; KEGG: azc:AZC_3805 transposase YP_001926632.1 PFAM: transposase IS3/IS911 family protein; KEGG: xau:Xaut_5013 transposase IS3/IS911 family protein YP_001926633.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2424 transposase, IS4 YP_001926634.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2424 transposase, IS4 YP_001926635.1 KEGG: abu:Abu_2252 hypothetical protein YP_001926636.1 KEGG: pat:Patl_3212 coagulation factor 5/8 type-like YP_001926637.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2424 transposase, IS4 YP_001926638.1 KEGG: nha:Nham_2538 ABC transporter YP_001926639.1 KEGG: mex:Mext_3702 hypothetical protein YP_001926640.1 KEGG: mex:Mext_3703 hypothetical protein YP_001926642.1 KEGG: mex:Mext_0084 hypothetical protein YP_001926643.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: mex:Mext_3733 substrate-binding region of ABC-type glycine betaine transport system YP_001926644.1 KEGG: mex:Mext_3734 signal peptide YP_001926646.1 KEGG: rxy:Rxyl_1766 hypothetical protein YP_001926647.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: mex:Mext_3735 helix-turn-helix-domain containing protein AraC type YP_001926648.1 TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: mex:Mext_3736 sarcosine oxidase, beta subunit family YP_001926649.1 TIGRFAM: sarcosine oxidase subunit delta; PFAM: sarcosine oxidase subunit delta heterotetrameric; KEGG: mex:Mext_3737 sarcosine oxidase subunit delta YP_001926650.1 TIGRFAM: sarcosine oxidase subunit alpha; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glycine cleavage T-protein barrel; KEGG: mex:Mext_3738 sarcosine oxidase subunit alpha YP_001926651.1 PFAM: sarcosine oxidase subunit gamma; KEGG: mex:Mext_3739 sarcosine oxidase gamma subunit YP_001926652.1 KEGG: mex:Mext_3740 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_001926653.1 KEGG: mex:Mext_3741 hypothetical protein YP_001926654.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: mex:Mext_3742 YbaK/prolyl-tRNA synthetase associated region YP_001926655.1 KEGG: mex:Mext_3743 electron transfer flavoprotein beta-subunit YP_001926656.1 PFAM: electron transfer flavoprotein alpha subunit; KEGG: mex:Mext_3744 electron transfer flavoprotein alpha subunit YP_001926657.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mex:Mext_3745 protein of unknown function DUF224 cysteine-rich region domain protein YP_001926658.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_3746 NADH:flavin oxidoreductase/NADH oxidase YP_001926659.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: mex:Mext_3747 oxidoreductase FAD-binding domain protein YP_001926660.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mex:Mext_3748 Rieske (2Fe-2S) domain protein YP_001926661.1 TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: mex:Mext_3749 histidinol-phosphate phosphatase YP_001926662.1 PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: mex:Mext_3750 choline/ethanolamine kinase YP_001926663.1 PFAM: aminoglycoside phosphotransferase; KEGG: mex:Mext_3751 aminoglycoside phosphotransferase YP_001926664.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_001926665.1 PFAM: regulatory protein DeoR; hypothetical protein; KEGG: bbt:BBta_2594 transcriptional regulatory protein, DeoR family YP_001926666.1 KEGG: mex:Mext_3753 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter; SMART: AAA ATPase YP_001926667.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3754 binding-protein-dependent transport systems inner membrane component YP_001926668.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3755 binding-protein-dependent transport systems inner membrane component YP_001926669.1 PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_3756 extracellular solute-binding protein family 5 YP_001926670.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: mex:Mext_3757 TonB-dependent siderophore receptor YP_001926671.1 PFAM: FecR protein; KEGG: mex:Mext_3758 FecR protein YP_001926672.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_3759 RNA polymerase sigma factor, sigma-70 family YP_001926673.1 PFAM: IucA/IucC family protein; KEGG: mex:Mext_3760 IucA/IucC family protein YP_001926674.1 PFAM: AMP-dependent synthetase and ligase; IucA/IucC family protein; KEGG: mex:Mext_3761 IucA/IucC family protein YP_001926675.1 KEGG: mex:Mext_3762 hypothetical protein YP_001926676.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mex:Mext_3763 xylose isomerase domain protein TIM barrel YP_001926677.1 KEGG: mex:Mext_3764 hypothetical protein YP_001926678.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_3765 GCN5-related N-acetyltransferase YP_001926679.1 KEGG: mex:Mext_3766 hypothetical protein YP_001926680.1 KEGG: mex:Mext_3768 transcriptional regulator, TetR family YP_001926681.1 KEGG: mex:Mext_3769 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_001926682.1 PFAM: Protein of unknown function DUF1790; KEGG: mex:Mext_3770 protein of unknown function DUF1790 YP_001926683.1 PFAM: protein of unknown function DUF526; KEGG: mex:Mext_3771 protein of unknown function DUF526 YP_001926684.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_3772 response regulator receiver YP_001926685.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_3773 ATP-binding region ATPase domain protein YP_001926686.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_3774 diguanylate cyclase YP_001926687.1 KEGG: mex:Mext_3775 glutathione-S-transferase protein YP_001926688.1 PFAM: transposase mutator type; KEGG: swi:Swit_4911 transposase, mutator type YP_001926689.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mex:Mext_3776 polyhydroxyalkanoate depolymerase, intracellular YP_001926690.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_001926691.1 PFAM: response regulator receiver; KEGG: mex:Mext_3778 response regulator receiver YP_001926692.1 PFAM: glutamine amidotransferase class-II; KEGG: mex:Mext_3779 glutamine amidotransferase class-II YP_001926693.1 PFAM: protein of unknown function DUF81; KEGG: mex:Mext_3780 protein of unknown function DUF81 YP_001926694.1 PFAM: MaoC domain protein dehydratase; KEGG: mex:Mext_3781 MaoC domain protein dehydratase YP_001926695.1 PFAM: protein of unknown function YGGT; KEGG: mex:Mext_3782 protein of unknown function YGGT YP_001926696.1 PFAM: FRG domain protein; KEGG: pla:Plav_0332 FRG domain protein YP_001926697.1 KEGG: mlo:mll6424 hypothetical protein YP_001926698.1 KEGG: pla:Plav_0334 hypothetical protein YP_001926699.1 PFAM: ExsB family protein; KEGG: pla:Plav_0335 ExsB family protein YP_001926700.1 PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: pla:Plav_0336 nucleoside 2-deoxyribosyltransferase YP_001926701.1 KEGG: pla:Plav_0337 hypothetical protein YP_001926702.1 KEGG: pla:Plav_0338 hypothetical protein YP_001926703.1 PFAM: helix-turn-helix domain protein; KEGG: rsq:Rsph17025_0810 transcriptional regulator, XRE family YP_001926704.1 KEGG: cph:Cpha266_1606 hypothetical protein YP_001926706.1 KEGG: rno:690277 hypothetical protein LOC690277 YP_001926708.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1916 major facilitator superfamily MFS_1 YP_001926709.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: mex:Mext_3866 arsenical-resistance protein YP_001926710.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: mex:Mext_1910 arsenate reductase YP_001926711.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mex:Mext_1909 low molecular weight phosphotyrosine protein phosphatase YP_001926712.1 SMART: regulatory protein ArsR; KEGG: mex:Mext_1908 regulatory protein ArsR YP_001926713.1 TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: mex:Mext_1907 arsenical resistance protein ArsH YP_001926714.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate YP_001926715.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: atc:AGR_L_3039 hypothetical protein YP_001926716.1 PFAM: resolvase; recombinase; KEGG: nha:Nham_3864 recombinase YP_001926717.1 KEGG: xla:380435 splicing factor, arginine/serine-rich 2 Pfam: RRM_1 DUF1674 PROSITE: ARG_RICH SER_RICH RRM YP_001926718.1 KEGG: rpe:RPE_2441 hypothetical protein YP_001926719.1 KEGG: rpd:RPD_0018 metallophosphoesterase YP_001926720.1 PFAM: metallophosphoesterase; KEGG: nha:Nham_3779 metallophosphoesterase YP_001926721.1 KEGG: nha:Nham_1977 hypothetical protein YP_001926722.1 PFAM: transposase mutator type; KEGG: swi:Swit_4911 transposase, mutator type YP_001926723.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: azc:AZC_1457 transcriptional regulator YP_001926724.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: xau:Xaut_3978 heavy metal translocating P-type ATPase YP_001926725.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: rru:Rru_A1026 transcriptional regulator, MerR family YP_001926726.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rpc:RPC_0073 cation diffusion facilitator family transporter YP_001926727.1 KEGG: bbt:BBta_7423 hypothetical protein of unknown function YP_001926728.1 PFAM: protein of unknown function DUF1078 domain protein; KEGG: nwi:Nwi_1133 flagellar basal body rod protein YP_001926729.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gbe:GbCGDNIH1_1900 two-component response regulator YP_001926730.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gdi:GDI1389 histidine kinase YP_001926731.1 PFAM: protein of unknown function DUF1275; KEGG: mex:Mext_3234 protein of unknown function DUF1275 YP_001926733.1 KEGG: ret:RHE_CH01219 probable cation efflux system protein YP_001926735.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: nha:Nham_1888 secretion protein HlyD YP_001926736.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: bbt:BBta_3413 RND divalent metal cation efflux transporter CnrA YP_001926737.1 KEGG: bbt:BBta_7261 exported protein of unknown function YP_001926739.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bbt:BBta_7268 cation efflux system protein CzcD YP_001926741.1 KEGG: rpa:RPA2057 hypothetical protein YP_001926742.1 PFAM: acriflavin resistance protein; KEGG: xau:Xaut_3406 heavy metal efflux pump, CzcA family YP_001926743.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: mex:Mext_2832 efflux transporter, RND family, MFP subunit YP_001926744.1 KEGG: mes:Meso_4409 hypothetical protein YP_001926745.1 KEGG: vch:VC0175 deoxycytidylate deaminase-related protein YP_001926748.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: gsu:GSU2183 fic family protein YP_001926749.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cte:CT0194 DNA-binding response regulator YP_001926750.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: nha:Nham_3294 periplasmic sensor signal transduction histidine kinase YP_001926751.1 PFAM: protein of unknown function DUF347; KEGG: bpl:BURPS1106A_1410 hypothetical protein YP_001926752.1 KEGG: bur:Bcep18194_A5018 hypothetical protein YP_001926753.1 PFAM: protein of unknown function DUF347; KEGG: gme:Gmet_0689 protein of unknown function DUF347 YP_001926754.1 PFAM: protein of unknown function DUF347; KEGG: mpa:MAP1104c hypothetical protein YP_001926755.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: mlo:mll8081 hypothetical protein YP_001926756.1 KEGG: ppu:PP_3651 sensor histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001926757.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: cak:Caul_1476 signal transduction histidine kinase YP_001926758.1 KEGG: rso:RSp0626 probable cobalamin biosynthesis protein YP_001926759.1 KEGG: mex:Mext_4259 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001926760.1 KEGG: rpe:RPE_4661 hypothetical protein YP_001926761.1 KEGG: mes:Meso_4219 hypothetical protein YP_001926762.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: nwi:Nwi_3130 secretion protein HlyD YP_001926763.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: xau:Xaut_3972 heavy metal efflux pump, CzcA family YP_001926764.1 PFAM: protein of unknown function DUF411; KEGG: xau:Xaut_4590 protein of unknown function DUF411 YP_001926765.1 KEGG: cch:Cag_2020 hypothetical protein YP_001926767.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: acr:Acry_3237 transcriptional regulator, MerR family YP_001926768.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: dge:Dgeo_2581 heavy metal translocating P-type ATPase YP_001926769.1 PFAM: peptidase A8 signal peptidase II; KEGG: hne:HNE_1728 signal peptidase II YP_001926770.1 PFAM: protein of unknown function DUF949; KEGG: mex:Mext_4733 protein of unknown function DUF949 YP_001926771.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: oan:Oant_3204 cytochrome c biogenesis protein transmembrane region YP_001926772.1 PFAM: protein of unknown function UPF0060; KEGG: mex:Mext_2715 protein of unknown function UPF0060 YP_001926773.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: nha:Nham_1888 secretion protein HlyD YP_001926775.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: mex:Mext_2832 efflux transporter, RND family, MFP subunit YP_001926776.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_2831 acriflavin resistance protein YP_001926777.1 KEGG: mex:Mext_2830 hypothetical protein YP_001926779.1 PFAM: protein of unknown function DUF305; KEGG: mex:Mext_2829 protein of unknown function DUF305 YP_001926780.1 KEGG: oan:Oant_3233 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein YP_001926782.1 KEGG: nha:Nham_1368 hypothetical protein YP_001926783.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: cak:Caul_1999 UBA/ThiF-type NAD/FAD binding protein YP_001926784.1 KEGG: bvi:Bcep1808_0171 hypothetical protein YP_001926785.1 PFAM: UvrD/REP helicase; protein of unknown function DUF955; KEGG: pna:Pnap_2446 UvrD/REP helicase YP_001926786.1 KEGG: pna:Pnap_2445 hypothetical protein YP_001926787.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: vei:Veis_3740 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001926789.1 PFAM: regulatory protein ArsR; KEGG: mex:Mext_1145 regulatory protein ArsR YP_001926790.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rpd:RPD_4242 ATP-binding region, ATPase-like YP_001926791.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_4906 transcriptional regulator YP_001926792.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: rpb:RPB_4360 thiol:disulfide interchange protein YP_001926793.1 PFAM: DSBA oxidoreductase; KEGG: rpb:RPB_4361 DsbA oxidoreductase YP_001926794.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpd:RPD_4246 ErfK/YbiS/YcfS/YnhG YP_001926795.1 PFAM: Domain of unknown function DUF1791; KEGG: dsh:Dshi_1398 domain of unknown function DUF1791 YP_001926796.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mex:Mext_1143 protein of unknown function DUF395 YeeE/YedE YP_001926797.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mex:Mext_1142 protein of unknown function DUF395 YeeE/YedE YP_001926798.1 PFAM: protein of unknown function DUF81; KEGG: xau:Xaut_2893 protein of unknown function DUF81 YP_001926799.1 PFAM: beta-lactamase domain protein; KEGG: xau:Xaut_2892 beta-lactamase domain protein YP_001926800.1 PFAM: Rhodanese domain protein; KEGG: xau:Xaut_2891 rhodanese domain protein YP_001926801.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_2578 RNA polymerase sigma factor, sigma-70 family YP_001926802.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bja:bll3505 hypothetical protein YP_001926803.1 PFAM: regulatory protein ArsR; KEGG: xau:Xaut_1527 regulatory protein ArsR YP_001926804.1 KEGG: rde:RD1_1508 SoxS YP_001926805.1 KEGG: bja:blr3510 probable thioredoxin YP_001926806.1 PFAM: cytochrome c class I; KEGG: bra:BRADO3179 monoheme cytochrome c sulfur oxidizing protein(SoxX) YP_001926807.1 with SoxZ catalyzes the oxidation of sulfur compounds YP_001926808.1 PFAM: Sulfur oxidation protein SoxZ; KEGG: bra:BRADO3181 sulfur oxidation protein (SoxZ) YP_001926809.1 KEGG: bra:BRADO3182 sulfur oxidation protein (SoxA); cytochrome c precursor YP_001926810.1 PFAM: 5'-nucleotidase; KEGG: bja:blr3515 probable Mn-dependent hydrolase YP_001926811.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: bja:blr3516 probable sulfite oxidase molybdopterin subunit YP_001926812.1 KEGG: bbt:BBta_3677 sulfite oxidase cytochrome subunit (SoxD) YP_001926813.1 PFAM: beta-lactamase domain protein; KEGG: rsq:Rsph17025_3910 aldehyde dehydrogenase YP_001926814.1 PFAM: Domain of unknown function DUF1791; KEGG: bra:BRADO1133 conserved hypothetical protein; signal peptide; YchN-like YP_001926815.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2424 transposase, IS4 YP_001926817.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: rpd:RPD_1040 protein of unknown function DUF125, transmembrane YP_001926818.1 PFAM: cytochrome B561; KEGG: nha:Nham_3894 cytochrome b561 YP_001926819.1 PFAM: Ferritin Dps family protein; KEGG: dra:DR_B0092 DNA-binding stress response protein, Dps family YP_001926820.1 KEGG: mex:Mext_0454 hypothetical protein YP_001926821.1 KEGG: fal:FRAAL0093 RNA polymerase sigma factor YP_001926822.1 PFAM: integrase family protein; KEGG: azc:AZC_1527 phage integrase YP_001926824.1 PFAM: protein of unknown function DUF159; KEGG: rpd:RPD_0010 protein of unknown function DUF159 YP_001926825.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_4359 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_001926826.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_4358 efflux transporter, RND family, MFP subunit YP_001926827.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_4357 regulatory protein TetR YP_001926828.1 KEGG: mex:Mext_3357 transcription elongation factor GreA/GreB domain protein YP_001926829.1 PFAM: transposase mutator type; KEGG: swi:Swit_4911 transposase, mutator type YP_001926830.1 KEGG: mex:Mext_3358 hypothetical protein YP_001926831.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_3345 ABC transporter YP_001926832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3346 binding-protein-dependent transport systems inner membrane component YP_001926833.1 KEGG: mex:Mext_3347 ABC transporter substrate-binding protein YP_001926834.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_3348 cyclic nucleotide-binding YP_001926835.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bja:blr1229 hypothetical protein YP_001926836.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: mex:Mext_3349 heat domain containing protein YP_001926837.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mex:Mext_3350 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_001926838.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_3351 fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_001926839.1 PFAM: protein of unknown function DUF971; KEGG: mex:Mext_3352 protein of unknown function DUF971 YP_001926840.1 PFAM: radical SAM domain protein; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_4610 radical SAM domain protein YP_001926841.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: mex:Mext_1475 chromate transporter, chromate ion transporter (CHR) family YP_001926842.1 SMART: Rhodanese domain protein; KEGG: mex:Mext_1474 rhodanese domain protein YP_001926843.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_4051 PAS sensor protein YP_001926845.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pst:PSPTO_3049 sugar ABC transporter, periplasmic sugar-binding YP_001926846.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4068 chemotaxis sensory transducer YP_001926847.1 PFAM: carbohydrate-selective porin OprB; KEGG: rso:RSp1632 porin B precursor outer (glucose porin) transhypothetical protein YP_001926848.1 PFAM: cytochrome c class I; KEGG: azc:AZC_2720 cytochrome-c oxidase protein YP_001926849.1 KEGG: azc:AZC_2719 GMC oxidoreductase YP_001926850.1 KEGG: azc:AZC_2718 hypothetical protein YP_001926852.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gdi:GDI0596 hypothetical protein YP_001926853.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: acr:Acry_2199 beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family YP_001926854.1 PFAM: HpcH/HpaI aldolase; KEGG: bxe:Bxe_A4404 2-dehydro-3-deoxyglucarate aldolase YP_001926855.1 PFAM: peptidase M24; KEGG: dol:Dole_1673 peptidase M24 YP_001926856.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: sma:SAV7147 IolD protein YP_001926857.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bja:blr5276 hypothetical protein YP_001926858.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mag:amb2106 dehydrogenase with different specificities YP_001926859.1 KEGG: rha:RHA1_ro02998 sugar transporter, MFS superfamily; TIGRFAM: sugar transporter; PFAM: general substrate transporter; major facilitator superfamily MFS_1 YP_001926860.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ccr:CC_1300 IolE protein YP_001926861.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_3247 transcriptional regulator, LysR family YP_001926862.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde Dehydrogenase_; KEGG: mex:Mext_1282 methylmalonate-semialdehyde dehydrogenase YP_001926863.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_1355 transcriptional regulator, LysR family YP_001926864.1 KEGG: tde:TDE2529 hypothetical protein YP_001926865.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: reu:Reut_B5508 hypothetical protein YP_001926866.1 PFAM: transposase IS3/IS911 family protein; KEGG: mex:Mext_3530 transposase IS3/IS911 family protein YP_001926867.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rle:RL3050 transmembrane ATP-binding cationic transporter YP_001926868.1 PFAM: ABC transporter permease; KEGG: rle:RL3051 transmembrane component of ABC transporter YP_001926869.1 PFAM: periplasmic binding protein; KEGG: rle:RL3052 cationic solute-binding component of ABC transporter YP_001926870.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1202 TonB-dependent siderophore receptor YP_001926871.1 PFAM: transposase mutator type; KEGG: swi:Swit_4911 transposase, mutator type YP_001926872.1 PFAM: HupE/UreJ protein; KEGG: syf:Synpcc7942_1373 hydrogenase accessory protein YP_001926873.1 KEGG: mjl:Mjls_5638 hypothetical protein YP_001926874.1 PFAM: nitrile hydratase alpha chain; KEGG: mva:Mvan_1504 thiocyanate hydrolase YP_001926875.1 KEGG: mjl:Mjls_5636 hypothetical protein YP_001926876.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2631 TonB-dependent siderophore receptor YP_001926877.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2424 transposase, IS4 YP_001926878.1 PFAM: protein of unknown function DUF81; KEGG: mex:Mext_1707 protein of unknown function DUF81 YP_001926881.1 KEGG: pde:Pden_3598 hypothetical protein YP_001926882.1 KEGG: rsp:RSP_2351 hypothetical protein YP_001926886.1 PFAM: peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_4383 peptidoglycan-binding domain 1 protein YP_001926888.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2424 transposase, IS4 YP_001926890.1 KEGG: mex:Mext_4381 hypothetical protein YP_001926891.1 KEGG: cya:CYA_1816 tetratricopeptide repeat protein YP_001926892.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2424 transposase, IS4 YP_001926893.1 KEGG: mar:MAE_03950 hypothetical protein YP_001926894.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3691 dTDP-glucose 4,6-dehydratase YP_001926895.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_2394 dTDP-4-dehydrorhamnose reductase YP_001926896.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase; KEGG: mex:Mext_2395 glucose-1-phosphate thymidylyltransferase YP_001926898.1 KEGG: bbt:BBta_4180 hypothetical protein YP_001926899.1 KEGG: mex:Mext_3515 hypothetical protein YP_001926900.1 KEGG: mex:Mext_4377 hypothetical protein YP_001926901.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4376 short-chain dehydrogenase/reductase SDR YP_001926902.1 TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: mex:Mext_4375 peptide chain release factor 3 YP_001926903.1 KEGG: mex:Mext_4374 hypothetical protein YP_001926904.1 KEGG: mex:Mext_4373 hypothetical protein YP_001926905.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_4372 ABC transporter YP_001926906.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4371 binding-protein-dependent transport systems inner membrane component YP_001926907.1 KEGG: mex:Mext_4370 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein YP_001926908.1 KEGG: mex:Mext_4369 hypothetical protein YP_001926909.1 KEGG: mex:Mext_3593 hypothetical protein YP_001926910.1 KEGG: mex:Mext_3594 hypothetical protein YP_001926912.1 KEGG: mex:Mext_3595 hypothetical protein YP_001926913.1 Transcriptional regulator that represses the manganese transporter MntH when manganese is present YP_001926914.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: mex:Mext_3597 Mn2+/Fe2+ transporter, NRAMP family YP_001926915.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3598 LysR substrate-binding YP_001926916.1 PFAM: sodium/sulphate symporter; citrate transporter; KEGG: mex:Mext_3599 sodium/sulphate symporter YP_001926917.1 TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: mex:Mext_3600 succinate dehydrogenase, cytochrome b556 subunit YP_001926918.1 TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: mex:Mext_3601 succinate dehydrogenase, hydrophobic membrane anchor protein YP_001926919.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_001926920.1 PFAM: protein of unknown function DUF433; KEGG: xfa:XF2030 hypothetical protein YP_001926921.1 KEGG: ava:Ava_2494 hypothetical protein YP_001926922.1 KEGG: mex:Mext_3603 hypothetical protein YP_001926923.1 KEGG: mex:Mext_3604 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin YP_001926924.1 KEGG: mex:Mext_3605 outer membrane lipoprotein omp19 YP_001926925.1 KEGG: mex:Mext_3606 conserved hypothetical proteinn YP_001926926.1 KEGG: mex:Mext_3607 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS) YP_001926927.1 KEGG: sat:SYN_02332 hypothetical cytosolic protein YP_001926928.1 KEGG: sat:SYN_02333 hypothetical hypothetical protein YP_001926929.1 PFAM: protein of unknown function DUF606; KEGG: mex:Mext_3609 protein of unknown function DUF606 YP_001926930.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: mex:Mext_3610 enoyl-CoA hydratase/isomerase YP_001926931.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3611 short-chain dehydrogenase/reductase SDR YP_001926932.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3612 short-chain dehydrogenase/reductase SDR YP_001926933.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: mex:Mext_3613 magnesium and cobalt transport protein CorA YP_001926934.1 PFAM: protein of unknown function DUF892; KEGG: mex:Mext_3614 protein of unknown function DUF892 YP_001926935.1 KEGG: rpe:RPE_0855 hypothetical protein YP_001926936.1 KEGG: mex:Mext_3617 hypothetical protein YP_001926937.1 KEGG: mex:Mext_2197 hypothetical protein YP_001926938.1 KEGG: mex:Mext_3840 tetratricopeptide TPR_4 YP_001926939.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3841 alpha/beta hydrolase fold YP_001926940.1 PFAM: periplasmic binding protein; KEGG: mex:Mext_3842 periplasmic binding protein YP_001926941.1 PFAM: ABC transporter permease; ABC transporter; KEGG: mex:Mext_3843 ABC transporter permease YP_001926942.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_3844 ABC transporter YP_001926943.1 PFAM: oxidoreductase molybdopterin binding; KEGG: mex:Mext_3845 oxidoreductase molybdopterin binding YP_001926944.1 KEGG: mex:Mext_3846 hypothetical protein YP_001926945.1 PFAM: NodS family protein; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_3847 methyltransferase type 12 YP_001926946.1 PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3848 acyl-CoA dehydrogenase type 2 domain YP_001926947.1 KEGG: mex:Mext_3849 hypothetical protein YP_001926948.1 KEGG: mex:Mext_3850 hypothetical protein YP_001926949.1 KEGG: mex:Mext_3851 hypothetical protein YP_001926950.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_3852 aldo/keto reductase YP_001926951.1 KEGG: mex:Mext_3853 hypothetical protein YP_001926952.1 PFAM: protein of unknown function DUF1044; KEGG: dac:Daci_1535 protein of unknown function DUF1044 YP_001926953.1 PFAM: helix-turn-helix domain protein; KEGG: swi:Swit_0156 transcriptional regulator-like protein YP_001926954.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_3854 isochorismatase hydrolase YP_001926955.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_3855 efflux transporter, RND family, MFP subunit YP_001926956.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_3856 acriflavin resistance protein YP_001926957.1 KEGG: mex:Mext_3857 hypothetical protein YP_001926958.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mex:Mext_3858 NADP oxidoreductase coenzyme F420-dependent YP_001926959.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_3859 aldo/keto reductase YP_001926961.1 TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase KEGG: mex:Mext_3860 methyltransferase YP_001926962.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mex:Mext_3861 RNA-binding S4 domain protein YP_001926963.1 PFAM: protein of unknown function DUF1328; KEGG: mex:Mext_3862 protein of unknown function DUF1328 YP_001926964.1 KEGG: mex:Mext_3867 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001926965.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3868 alpha/beta hydrolase fold YP_001926966.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3869 short-chain dehydrogenase/reductase SDR YP_001926967.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mex:Mext_3870 CMP/dCMP deaminase zinc-binding YP_001926968.1 KEGG: mex:Mext_3871 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase YP_001926969.1 KEGG: mex:Mext_3872 hypothetical protein YP_001926971.1 KEGG: mex:Mext_3873 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type YP_001926972.1 KEGG: mex:Mext_3874 hypothetical protein YP_001926973.1 KEGG: mex:Mext_3875 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_001926974.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mex:Mext_3876 transcription elongation factor GreA/GreB domain protein YP_001926975.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_3877 quinone oxidoreductase, YhdH/YhfP family YP_001926976.1 KEGG: mex:Mext_3878 hypothetical protein YP_001926977.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mex:Mext_3879 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_001926978.1 PFAM: transcription factor CarD; KEGG: mex:Mext_3880 transcription factor CarD YP_001926979.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma-32 is responsible for the expression of heat shock promoters; there are paralogs in Rhizobium and Sinorhizobium; the proteins in this cluster act as secondary heat shock sigma factors; the Rhizobium sigma-32 factor may also be involved in exopolysaccharide production YP_001926980.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3526 LysR substrate-binding YP_001926981.1 KEGG: bbt:BBta_6757 lambda integrase-like/DNA breaking-rejoining enzyme, catalytic core YP_001926983.1 PFAM: isochorismatase hydrolase; KEGG: scl:sce3379 isochorismatase hydrolase YP_001926984.1 KEGG: mex:Mext_1696 conserved hypothetical protein; signal peptide YP_001926985.1 PFAM: inner-membrane translocator; KEGG: psb:Psyr_1004 inner-membrane translocator YP_001926986.1 PFAM: inner-membrane translocator; KEGG: psa:PST_3580 ABC transporter, permease protein YP_001926987.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: psa:PST_3581 ABC transporter, ATP-binding protein YP_001926988.1 PFAM: basic membrane lipoprotein; KEGG: psa:PST_3583 bmp family protein YP_001926989.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: psa:PST_3582 hypothetical protein YP_001926990.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: psa:PST_3584 oxidoreductase, 2OG-Fe(II) oxygenase family YP_001926991.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine YP_001926992.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0809 chemotaxis sensory transducer YP_001926993.1 PFAM: Hemolysin-type calcium-binding region; KEGG: mex:Mext_3886 hemolysin-type calcium-binding region YP_001926994.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: mex:Mext_3887 PDZ/DHR/GLGF domain protein YP_001926995.1 KEGG: mex:Mext_3890 hypothetical protein YP_001926996.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; KEGG: mex:Mext_3891 excinuclease ABC, A subunit YP_001926997.1 PFAM: Protein of unknown function DUF1772; KEGG: smd:Smed_2032 protein of unknown function DUF1772 YP_001926998.1 PFAM: cupin; KEGG: mex:Mext_1685 cupin 2 conserved barrel domain protein YP_001926999.1 KEGG: mex:Mext_3892 conserved hypothetical protein; methyl-accepting chemotaxis protein YP_001927000.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; nitrate and nitrite sensing domain protein; KEGG: mex:Mext_3893 nitrate and nitrite sensing domain protein YP_001927001.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_3894 efflux transporter, RND family, MFP subunit YP_001927002.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_3895 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_001927003.1 KEGG: mex:Mext_3896 hypothetical protein YP_001927004.1 KEGG: mex:Mext_3897 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001927005.1 PFAM: regulatory protein Crp; KEGG: mex:Mext_3898 regulatory protein Crp YP_001927006.1 PFAM: glycoside hydrolase family 25; KEGG: mex:Mext_3899 glycoside hydrolase family 25 YP_001927007.1 PFAM: protein of unknown function DUF1130; KEGG: mex:Mext_3900 protein of unknown function DUF1130 YP_001927008.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mex:Mext_3901 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_001927010.1 KEGG: mex:Mext_3902 hypothetical protein YP_001927011.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_3903 alcohol dehydrogenase zinc-binding domain protein YP_001927012.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_3904 nicotinamidase YP_001927013.1 PFAM: aminotransferase class IV; KEGG: mex:Mext_3905 aminotransferase class IV YP_001927014.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: mex:Mext_3906 glutamine amidotransferase of anthranilate synthase YP_001927015.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: mex:Mext_3907 para-aminobenzoate synthase, subunit I YP_001927016.1 TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: mex:Mext_3908 addiction module antitoxin, RelB/DinJ family YP_001927017.1 TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: mex:Mext_3909 addiction module toxin, RelE/StbE family YP_001927018.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit YP_001927019.1 KEGG: mex:Mext_3911 hypothetical protein YP_001927020.1 KEGG: mex:Mext_3912 hypothetical protein YP_001927022.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: mex:Mext_3913 MazG family protein YP_001927023.1 PFAM: plasmid encoded RepA protein; KEGG: mex:Mext_3914 plasmid encoded RepA protein YP_001927024.1 KEGG: mex:Mext_3915 hypothetical protein YP_001927025.1 PFAM: Patatin; KEGG: mex:Mext_3916 patatin YP_001927026.1 PFAM: HpcH/HpaI aldolase; KEGG: mex:Mext_3917 HpcH/HpaI aldolase YP_001927027.1 TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: mex:Mext_3918 hemimethylated DNA binding protein YP_001927028.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_3919 diguanylate cyclase YP_001927029.1 KEGG: mex:Mext_3920 hypothetical protein YP_001927030.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_3921 efflux transporter, RND family, MFP subunit YP_001927031.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_3922 acriflavin resistance protein YP_001927032.1 KEGG: mex:Mext_3923 metal dependent phophohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region YP_001927033.1 TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mex:Mext_3924 agmatinase YP_001927034.1 KEGG: mex:Mext_3926 hypothetical protein YP_001927035.1 KEGG: mex:Mext_3927 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein YP_001927036.1 KEGG: rpc:RPC_4129 hypothetical protein YP_001927037.1 TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC transporter; KEGG: mex:Mext_3928 2-polyprenylphenol 6-hydroxylase YP_001927038.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_3929 ubiquinone/menaquinone biosynthesis methyltransferase YP_001927039.1 KEGG: bha:BH3368 hypothetical protein YP_001927040.1 KEGG: mex:Mext_3930 dihydrofolate reductase YP_001927041.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3931 short-chain dehydrogenase/reductase SDR YP_001927042.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway YP_001927043.1 PFAM: Colicin V production protein; KEGG: mex:Mext_3933 colicin V production protein YP_001927044.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_001927045.1 KEGG: mex:Mext_3937 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_001927046.1 PFAM: protein of unknown function DUF29; DnaB domain protein helicase domain protein; KEGG: rpb:RPB_0542 protein of unknown function DUF29 YP_001927047.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: mex:Mext_3938 replicative DNA helicase YP_001927049.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_001927050.1 KEGG: mex:Mext_3940 hypothetical protein YP_001927051.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_001927052.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_001927053.1 KEGG: mex:Mext_3943 gentamicin 3'-N-acetyltransferase YP_001927054.1 PFAM: protein of unknown function DUF1696; KEGG: mex:Mext_3944 protein of unknown function DUF1696 YP_001927055.1 KEGG: mex:Mext_3945 hypothetical protein YP_001927056.1 KEGG: mex:Mext_3946 hypothetical protein YP_001927057.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_3947 cold-shock protein DNA-binding YP_001927058.1 KEGG: mex:Mext_3948 hypothetical protein YP_001927059.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_001927060.1 KEGG: mex:Mext_3950 hypothetical protein YP_001927061.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_3951 TonB-dependent receptor plug YP_001927062.1 KEGG: mex:Mext_3952 hypothetical protein YP_001927063.1 KEGG: mex:Mext_3953 hypothetical protein YP_001927064.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_3954 GCN5-related N-acetyltransferase YP_001927065.1 KEGG: pfo:Pfl_1411 hypothetical protein YP_001927066.1 KEGG: gur:Gura_4195 hypothetical protein YP_001927067.1 PFAM: citrate transporter; KEGG: mex:Mext_3955 citrate transporter YP_001927068.1 involved in the transport of C4-dicarboxylates across the membrane YP_001927069.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3957 NAD-dependent epimerase/dehydratase YP_001927070.1 PFAM: fumarate lyase; KEGG: mex:Mext_3958 fumarate lyase YP_001927071.1 PFAM: porin; KEGG: mex:Mext_3960 porin YP_001927072.1 PFAM: extracellular solute-binding protein family 3; KEGG: mex:Mext_3961 extracellular solute-binding protein family 3 YP_001927073.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3962 polar amino acid ABC transporter, inner membrane subunit YP_001927074.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3963 polar amino acid ABC transporter, inner membrane subunit YP_001927075.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_3964 ABC transporter YP_001927076.1 KEGG: rle:RL3391 hypothetical protein YP_001927077.1 KEGG: mex:Mext_4512 hypothetical protein YP_001927078.1 PFAM: protein of unknown function DUF606; KEGG: mex:Mext_3965 protein of unknown function DUF606 YP_001927079.1 PFAM: arsenic pump hypothetical protein; citrate transporter; KEGG: mex:Mext_3966 arsenical pump hypothetical protein YP_001927080.1 PFAM: metallophosphoesterase; KEGG: kpn:KPN_04680 phosphohydrolase YP_001927081.1 KEGG: mex:Mext_3967 hypothetical protein YP_001927082.1 KEGG: mex:Mext_3968 propeptide PepSY amd peptidase M4 YP_001927083.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_3969 NUDIX hydrolase YP_001927084.1 PFAM: band 7 protein; KEGG: mex:Mext_3970 band 7 protein YP_001927085.1 KEGG: mex:Mext_3971 hypothetical protein YP_001927086.1 TIGRFAM: amino acid adenylation domain protein; non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; transferase hexapeptide repeat containing protein; KEGG: mex:Mext_3972 non-ribosomal peptide synthetase YP_001927087.1 PFAM: protein of unknown function DUF891; KEGG: mex:Mext_3973 protein of unknown function DUF891 YP_001927088.1 KEGG: mex:Mext_3974 transcriptional regulator, Fis family YP_001927089.1 KEGG: mex:Mext_3975 conserved hypothetical protein; alpha/beta hydrolase domain YP_001927090.1 PFAM: aminotransferase class V; KEGG: mex:Mext_3976 aminotransferase class V YP_001927091.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: mex:Mext_3977 FeS assembly protein SufB YP_001927092.1 KEGG: mex:Mext_3978 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; SMART: AAA ATPase YP_001927093.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: mex:Mext_3979 FeS assembly protein SufD YP_001927094.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mex:Mext_3980 cysteine desulfurase, SufS subfamily YP_001927095.1 TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59; KEGG: mex:Mext_3981 FeS assembly SUF system protein YP_001927096.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: mex:Mext_3982 FeS assembly scaffold SufA YP_001927097.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_3983 diguanylate cyclase YP_001927098.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_3984 DEAD/DEAH box helicase domain protein YP_001927099.1 KEGG: mex:Mext_3985 hypothetical protein YP_001927100.1 PFAM: porin; KEGG: mex:Mext_3986 porin YP_001927102.1 KEGG: mex:Mext_3987 hypothetical protein YP_001927103.1 KEGG: mex:Mext_3988 hypothetical protein YP_001927104.1 KEGG: mex:Mext_3989 hypothetical protein YP_001927105.1 KEGG: mex:Mext_3990 hypothetical protein YP_001927106.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: mex:Mext_3991 HAD-superfamily hydrolase, subfamily IA, variant 1 YP_001927107.1 KEGG: mex:Mext_3992 hypothetical protein YP_001927108.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_3993 ABC transporter YP_001927109.1 PFAM: lipolytic protein G-D-S-L family; KEGG: mex:Mext_3994 lipolytic protein G-D-S-L family YP_001927110.1 TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; KEGG: mex:Mext_3995 2'-5' RNA ligase YP_001927111.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: mex:Mext_3996 preprotein translocase, SecE subunit YP_001927112.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: mex:Mext_3997 transcription termination/antitermination factor NusG YP_001927113.1 binds directly to 23S ribosomal RNA YP_001927114.1 in Escherichia coli and methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_001927115.1 PFAM: cytochrome P450; KEGG: mex:Mext_4000 cytochrome P450 YP_001927116.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_4001 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001927117.1 KEGG: mex:Mext_4002 ferredoxin protein YP_001927118.1 PFAM: acyltransferase 3; KEGG: mex:Mext_4003 acyltransferase 3 YP_001927119.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4004 glycosyl transferase family 2 YP_001927120.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mex:Mext_4005 aspartyl-tRNA synthetase YP_001927121.1 KEGG: mex:Mext_4006 biotin synthase; TIGRFAM: biotin synthase; PFAM: radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB YP_001927122.1 KEGG: smd:Smed_4280 transcriptional regulator domain protein YP_001927123.1 KEGG: swi:Swit_0937 prolyl aminopeptidase YP_001927124.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mex:Mext_4008 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_001927125.1 PFAM: hypothetical protein involved in aromatic hydrocarbon degradation; KEGG: mex:Mext_4009 hypothetical protein involved in aromatic hydrocarbon degradation YP_001927126.1 PFAM: prephenate dehydrogenase; KEGG: mex:Mext_4010 prephenate dehydrogenase YP_001927127.1 KEGG: mex:Mext_4011 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_001927128.1 PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_4012 radical SAM domain protein YP_001927129.1 PFAM: phosphate-selective porin O and P; KEGG: mex:Mext_4013 phosphate-selective porin O and P YP_001927131.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_001927132.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_001927133.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_001927134.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_001927135.1 PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_4019 extracellular solute-binding protein family 1 YP_001927136.1 PFAM: endoribonuclease L-PSP; KEGG: mex:Mext_4020 endoribonuclease L-PSP YP_001927137.1 PFAM: transglycosylase; KEGG: mex:Mext_4021 transglycosylase YP_001927138.1 KEGG: mex:Mext_4024 hypothetical protein YP_001927139.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_4025 glutathione S-transferase domain YP_001927140.1 KEGG: mex:Mext_4027 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein YP_001927141.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_001927142.1 KEGG: asa:ASA_0633 hypothetical protein YP_001927143.1 PFAM: amino acid permease-associated region; KEGG: mex:Mext_4029 amino acid permease-associated region YP_001927145.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_4030 exodeoxyribonuclease III Xth YP_001927146.1 PFAM: BLUF domain protein; KEGG: mex:Mext_4031 BLUF domain protein YP_001927147.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: mex:Mext_4032 diguanylate cyclase YP_001927148.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: mex:Mext_4033 outer membrane lipoprotein carrier protein LolA YP_001927149.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: mex:Mext_4034 cell divisionFtsK/SpoIIIE YP_001927150.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers YP_001927151.1 LovR from Caulobacter crescentus is a response regulator part of a two-component signaling system that regulates photosensitive bacterial cell-surface and cell-cell attachment YP_001927152.1 KEGG: mex:Mext_4037 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001927153.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4038 major facilitator superfamily MFS_1 YP_001927154.1 KEGG: mex:Mext_4039 hypothetical protein YP_001927155.1 KEGG: mex:Mext_4040 hypothetical protein YP_001927156.1 PFAM: NnrUfamily protein; KEGG: mex:Mext_4041 NnrU family protein YP_001927157.1 KEGG: mex:Mext_4042 hypothetical protein YP_001927158.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_001927159.1 PFAM: protein of unknown function DUF81; KEGG: mex:Mext_4044 protein of unknown function DUF81 YP_001927160.1 PFAM: glutamate--cysteine ligase GCS2; KEGG: mex:Mext_4045 glutamate--cysteine ligase GCS2 YP_001927161.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_001927162.1 KEGG: mex:Mext_4047 hypothetical protein YP_001927163.1 PFAM: protein of unknown function UPF0074; KEGG: mex:Mext_4048 protein of unknown function UPF0074 YP_001927164.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_4049 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001927165.1 PFAM: CheB methylesterase; KEGG: pna:Pnap_3575 CheB methylesterase YP_001927166.1 KEGG: mex:Mext_4051 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001927167.1 KEGG: mex:Mext_4052 glutathione S-transferase-like protein YP_001927168.1 PFAM: protein of unknown function DUF937; KEGG: mex:Mext_4053 protein of unknown function DUF937 YP_001927169.1 KEGG: mex:Mext_4054 hypothetical protein YP_001927170.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_001927171.1 TIGRFAM: prevent-host-death family protein; KEGG: smd:Smed_4693 prevent-host-death family protein YP_001927172.1 PFAM: PilT protein domain protein; KEGG: mex:Mext_4056 PilT protein domain protein YP_001927173.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4057 LysR substrate-binding YP_001927174.1 PFAM: DoxX family protein; KEGG: mex:Mext_4059 DoxX family protein YP_001927175.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_4060 glyoxalase/bleomycin resistance protein/dioxygenase YP_001927176.1 KEGG: mex:Mext_4061 hypothetical protein YP_001927177.1 KEGG: mex:Mext_4062 hypothetical protein YP_001927178.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate YP_001927179.1 PFAM: ankyrin; KEGG: mex:Mext_4065 ankyrin YP_001927180.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: mex:Mext_4066 glycerol kinase YP_001927181.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_4067 alpha/beta hydrolase fold YP_001927182.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4068 chemotaxis sensory transducer YP_001927183.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: mex:Mext_4069 glycerophosphoryl diester phosphodiesterase YP_001927184.1 PFAM: endoribonuclease L-PSP; KEGG: mex:Mext_4070 endoribonuclease L-PSP YP_001927185.1 PFAM: ABC transporter transmembrane region; ABC transporter; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: mex:Mext_4071 ABC transporter YP_001927186.1 PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_4072 secretion protein HlyD family protein YP_001927187.1 KEGG: rha:RHA1_ro05486 hypothetical protein YP_001927188.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_4074 helix-turn-helix-domain containing protein AraC type YP_001927189.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mex:Mext_4075 acetylornithine and succinylornithine aminotransferase YP_001927190.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: mex:Mext_4076 ornithine carbamoyltransferase YP_001927191.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: mex:Mext_4077 activator of HSP90 ATPase 1 family protein YP_001927192.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_4078 glyoxalase/bleomycin resistance protein/dioxygenase YP_001927193.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4079 short-chain dehydrogenase/reductase SDR YP_001927194.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: mex:Mext_4080 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001927195.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; Phytochrome central region domain protein; PAS fold-2 domain protein; KEGG: mex:Mext_4081 histidine kinase dimerisation/phosphoacceptor YP_001927196.1 PFAM: Haem oxygenase-like; KEGG: mex:Mext_4082 haem oxygenase YP_001927197.1 KEGG: mex:Mext_4083 hypothetical protein YP_001927198.1 KEGG: mex:Mext_4084 hypothetical protein YP_001927199.1 KEGG: mex:Mext_4085 capsule polysaccharide export protein-like protein YP_001927200.1 KEGG: mex:Mext_4086 hypothetical protein YP_001927201.1 KEGG: mex:Mext_4087 hypothetical protein YP_001927202.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase activities AAA_5; SMART: AAA ATPase; KEGG: mex:Mext_4088 sigma-54 factor interaction domain-containing protein YP_001927203.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: mex:Mext_4089 flagellar motor switch protein FliN YP_001927204.1 binds to and inhibits the function of flagella specific ATPase FliI YP_001927205.1 One of three proteins involved in switching the direction of the flagellar rotation YP_001927206.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod YP_001927207.1 PFAM: protein of unknown function DUF1153; KEGG: mex:Mext_4093 protein of unknown function DUF1153 YP_001927208.1 PFAM: flagellar hook capping protein; KEGG: mex:Mext_4094 flagellar hook capping protein YP_001927209.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_001927210.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_4097 phosphatidylethanolamine N-methyltransferase YP_001927211.1 PFAM: hypothetical protein; KEGG: mex:Mext_4098 hypothetical protein YP_001927212.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_4099 ATP-binding region ATPase domain protein YP_001927213.1 PFAM: protein of unknown function DUF891; KEGG: cak:Caul_5448 protein of unknown function DUF891 YP_001927214.1 PFAM: helix-turn-helix domain protein; KEGG: mag:amb2064 predicted transcriptional regulator YP_001927215.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4101 drug resistance transporter, EmrB/QacA subfamily YP_001927216.1 PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_4102 secretion protein HlyD family protein YP_001927217.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_4103 regulatory protein TetR YP_001927218.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_4104 acyl-CoA dehydrogenase domain protein YP_001927219.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: mex:Mext_4105 SUA5/YciO/YrdC/YwlC family protein YP_001927220.1 KEGG: mex:Mext_4107 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001927221.1 PFAM: KaiB domain protein; KEGG: mex:Mext_4108 KaiB domain protein YP_001927222.1 PFAM: KaiB domain protein; KEGG: mex:Mext_4109 KaiB domain protein YP_001927223.1 acts as a promotor non-specific transcription repressor YP_001927225.1 PFAM: response regulator receiver; KEGG: mex:Mext_4112 response regulator receiver YP_001927226.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_4113 ATP-binding region ATPase domain protein YP_001927227.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_4114 response regulator receiver YP_001927228.1 KEGG: mex:Mext_4115 hypothetical protein YP_001927229.1 PFAM: nuclease (SNase domain protein); KEGG: mex:Mext_4116 nuclease (SNase domain protein) YP_001927230.1 KEGG: mex:Mext_4117 hypothetical protein YP_001927231.1 KEGG: mex:Mext_4118 iron uptake protein YP_001927232.1 PFAM: PepSY-associated TM helix domain protein; KEGG: mex:Mext_4119 PepSY-associated TM helix domain protein YP_001927233.1 KEGG: mex:Mext_4120 iron uptake protein YP_001927234.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_4121 TonB-dependent siderophore receptor YP_001927235.1 KEGG: mex:Mext_4122 hypothetical protein YP_001927238.1 KEGG: mex:Mext_4124 hypothetical protein YP_001927239.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: mex:Mext_4125 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_001927240.1 PFAM: Hemolysin-type calcium-binding region; KEGG: mex:Mext_4126 hemolysin-type calcium-binding region YP_001927241.1 PFAM: Hemolysin-type calcium-binding region; KEGG: mex:Mext_4127 hemolysin-type calcium-binding region YP_001927242.1 KEGG: mex:Mext_4128 hypothetical protein YP_001927243.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: mex:Mext_4129 lipopolysaccharide biosynthesis protein YP_001927244.1 KEGG: mex:Mext_4130 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_001927245.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: mex:Mext_4131 NAD-dependent epimerase/dehydratase YP_001927246.1 KEGG: mex:Mext_4132 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF YP_001927247.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_4133 NAD-dependent epimerase/dehydratase YP_001927248.1 PFAM: polysaccharide export protein; KEGG: mex:Mext_4134 polysaccharide export protein YP_001927249.1 KEGG: mex:Mext_4135 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase; cupin YP_001927250.1 KEGG: mex:Mext_4136 hypothetical protein YP_001927251.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_4137 response regulator receiver YP_001927252.1 KEGG: mex:Mext_4138 hypothetical protein YP_001927253.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein; SMP-30/gluconolaconase/LRE domain protein; KEGG: mex:Mext_4139 40-residue YVTN family beta-propeller repeat protein YP_001927254.1 KEGG: mex:Mext_4140 MxaD protein YP_001927255.1 SMART: von Willebrand factor type A; KEGG: mex:Mext_4141 von Willebrand factor type A YP_001927256.1 KEGG: mex:Mext_4142 hypothetical protein YP_001927257.1 SMART: von Willebrand factor type A; KEGG: mex:Mext_4143 von Willebrand factor type A YP_001927258.1 KEGG: mex:Mext_4144 MxaA protein YP_001927259.1 KEGG: mex:Mext_4145 hypothetical protein YP_001927260.1 PFAM: ATPase activities AAA_3; ATPase activities AAA_5; SMART: AAA ATPase; KEGG: mex:Mext_4146 ATPase activities AAA_3 YP_001927261.1 PFAM: methanol dehydrogenase beta subunit; KEGG: mex:Mext_4147 methanol dehydrogenase beta subunit YP_001927262.1 PFAM: cytochrome c class I; KEGG: mex:Mext_4148 cytochrome c class I YP_001927263.1 SMART: extracellular solute-binding protein family 3; KEGG: mex:Mext_4149 extracellular solute-binding protein family 3 YP_001927264.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: pyrrolo-quinoline quinone; KEGG: mex:Mext_4150 PQQ-dependent dehydrogenase, methanol/ethanol family YP_001927265.1 KEGG: mex:Mext_4151 hypothetical protein YP_001927266.1 KEGG: mex:Mext_4152 hypothetical protein YP_001927267.1 KEGG: mex:Mext_4153 hypothetical protein YP_001927268.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_4154 beta-lactamase domain protein YP_001927269.1 KEGG: mex:Mext_4155 hypothetical protein YP_001927271.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; nucleotidyl transferase; KEGG: mex:Mext_4156 UDP-N-acetylglucosamine pyrophosphorylase YP_001927272.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: mex:Mext_4157 glucosamine--fructose-6-phosphate aminotransferase, isomerizing YP_001927273.1 KEGG: bja:blr3866 transposase YP_001927274.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2424 transposase, IS4 YP_001927275.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pap:PSPA7_0578 probable sigma-70 factor, ECF subfamily YP_001927276.1 PFAM: FecR protein; KEGG: dac:Daci_3275 anti-FecI sigma factor, FecR YP_001927278.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: saq:Sare_4509 pyridoxal-5'-phosphate-dependent protein beta subunit YP_001927279.1 PFAM: protein of unknown function DUF161; KEGG: psa:PST_4016 hypothetical protein YP_001927280.1 TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; KEGG: azc:AZC_1258 biopolymer transport protein YP_001927281.1 TIGRFAM: TonB system transport protein ExbD; PFAM: biopolymer transport protein ExbD/TolR; KEGG: rpe:RPE_3145 biopolymer transport protein ExbD/TolR YP_001927282.1 TIGRFAM: TonB family protein; KEGG: rpc:RPC_1982 TonB-like YP_001927284.1 PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: bxe:Bxe_C1049 TonB-dependent siderophore receptor YP_001927285.1 PFAM: ABC transporter; SbmABacA family protein; ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_4485 ABC transporter YP_001927287.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rde:RD1_3787 transcriptional regulator, GntR family YP_001927288.1 TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: mag:amb3177 permease of the major facilitator superfamily YP_001927289.1 KEGG: mag:amb3176 probable tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_001927290.1 PFAM: MOFRL domain protein; KEGG: azo:azo1162 probable hydroxypyruvate reductase YP_001927291.1 KEGG: bbt:BBta_5564 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_001927292.1 KEGG: mex:Mext_1146 nitrate ABC transporter, ATPase subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter; SMART: AAA ATPase YP_001927293.1 TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_1147 nitrate ABC transporter, inner membrane subunit YP_001927294.1 KEGG: mex:Mext_1148 nitrate ABC transporter substrate-binding protein YP_001927295.1 PFAM: protein of unknown function DUF81; KEGG: swi:Swit_3745 protein of unknown function DUF81 YP_001927296.1 PFAM: beta-lactamase domain protein; KEGG: gdi:GDI3833 hypothetical protein YP_001927297.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rubredoxin-type Fe(Cys)4 protein; KEGG: mex:Mext_1149 rubredoxin-type Fe(Cys)4 protein YP_001927298.1 KEGG: mex:Mext_1150 acyl-CoA dehydrogenase-like protein YP_001927299.1 PFAM: OsmC family protein; KEGG: mex:Mext_1151 OsmC family protein YP_001927300.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase activities AAA_5; SMART: AAA ATPase; KEGG: mex:Mext_1152 sigma-54 factor interaction domain-containing protein YP_001927301.1 PFAM: protein of unknown function DUF336; KEGG: mex:Mext_4158 protein of unknown function DUF336 YP_001927302.1 PFAM: protein of unknown function DUF502; KEGG: mex:Mext_4159 protein of unknown function DUF502 YP_001927303.1 KEGG: mex:Mext_4160 hypothetical protein YP_001927304.1 catalyzes branch migration in Holliday junction intermediates YP_001927305.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sal:Sala_2126 NAD-dependent epimerase/dehydratase YP_001927306.1 PFAM: protein of unknown function DUF339; KEGG: mex:Mext_4162 protein of unknown function DUF339 YP_001927307.1 KEGG: mex:Mext_4163 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases YP_001927308.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_4164 cold-shock protein DNA-binding YP_001927309.1 KEGG: mex:Mext_4165 hypothetical protein YP_001927310.1 KEGG: mex:Mext_4166 hypothetical protein YP_001927311.1 KEGG: mex:Mext_4167 hypothetical protein YP_001927312.1 KEGG: mex:Mext_4168 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein YP_001927313.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_4169 ATP-binding region ATPase domain protein YP_001927314.1 PFAM: response regulator receiver; KEGG: mex:Mext_4170 response regulator receiver YP_001927315.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_4171 AMP-dependent synthetase and ligase YP_001927316.1 KEGG: mex:Mext_4172 hypothetical protein YP_001927317.1 PFAM: glycosyl transferase family 39; KEGG: mex:Mext_4173 glycosyl transferase family 39 YP_001927318.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4174 glycosyl transferase family 2 YP_001927319.1 PFAM: lipid A biosynthesis domain protein; KEGG: mex:Mext_4175 lipid A biosynthesis domain protein YP_001927320.1 KEGG: mex:Mext_4176 hypothetical protein YP_001927321.1 KEGG: mex:Mext_4177 cyclohexanone monooxygenase YP_001927322.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: mex:Mext_4178 alpha/beta hydrolase fold-3 domain protein YP_001927323.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4179 short-chain dehydrogenase/reductase SDR YP_001927324.1 PFAM: protein of unknown function UPF0061; KEGG: mex:Mext_4180 protein of unknown function UPF0061 YP_001927325.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_4181 protein of unknown function DUF6 transmembrane YP_001927326.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: mex:Mext_4182 histidine kinase dimerisation/phosphoacceptor YP_001927327.1 PFAM: integrase catalytic region; KEGG: nha:Nham_4092 integrase, catalytic region YP_001927328.1 PFAM: lipolytic protein G-D-S-L family; KEGG: mex:Mext_4183 lipolytic protein G-D-S-L family YP_001927329.1 KEGG: mex:Mext_4184 hypothetical protein YP_001927330.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3801 carbonate dehydratase YP_001927331.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_3802 aldo/keto reductase YP_001927332.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_4185 beta-lactamase-like protein YP_001927333.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: mex:Mext_4186 hydrolase, TatD family YP_001927334.1 TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); KEGG: mex:Mext_4187 methionyl-tRNA synthetase YP_001927335.1 KEGG: mex:Mext_4188 hypothetical protein YP_001927336.1 KEGG: mex:Mext_4189 hypothetical protein YP_001927337.1 KEGG: mex:Mext_4190 DNA-directed DNA polymerase YP_001927338.1 PFAM: thymidylate kinase; KEGG: mex:Mext_4191 dTMP kinase YP_001927339.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4192 ornithine carbamoyltransferase YP_001927340.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4193 binding-protein-dependent transport systems inner membrane component YP_001927341.1 PFAM: ABC transporter; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mex:Mext_4194 ABC transporter YP_001927342.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_4195 cyclic nucleotide-binding YP_001927343.1 KEGG: mex:Mext_4197 hypothetical protein YP_001927345.1 KEGG: mex:Mext_3591 hypothetical protein YP_001927346.1 KEGG: mex:Mext_4198 hypothetical protein YP_001927347.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4199 major facilitator superfamily MFS_1 YP_001927348.1 PFAM: aminotransferase class V; KEGG: mex:Mext_4200 aminotransferase class V YP_001927349.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_4201 regulatory protein GntR HTH YP_001927350.1 KEGG: mex:Mext_4202 hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel YP_001927351.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_4203 short-chain dehydrogenase/reductase SDR YP_001927352.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: mex:Mext_4204 D-lactate dehydrogenase (cytochrome) YP_001927353.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mex:Mext_4205 polyhydroxyalkanoate depolymerase, intracellular YP_001927354.1 PFAM: aldehyde Dehydrogenase_; KEGG: mex:Mext_4206 aldehyde dehydrogenase YP_001927355.1 KEGG: mex:Mext_4207 collagen triple helix repeat YP_001927356.1 PFAM: surface presentation of antigens (SPOA) protein; KEGG: mex:Mext_4210 surface presentation of antigens (SpoA) protein YP_001927357.1 TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: mex:Mext_4211 lipoate-protein ligase B YP_001927358.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4212 glycosyl transferase family 2 YP_001927359.1 PFAM: protein of unknown function DUF892; KEGG: mex:Mext_1129 protein of unknown function DUF892 YP_001927360.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: rso:RS02580 glucose-fructose oxidoreductase oxidoreductase protein YP_001927361.1 PFAM: protein of unknown function DUF606; KEGG: mex:Mext_4213 protein of unknown function DUF606 YP_001927362.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_4214 protein of unknown function UPF0118 YP_001927363.1 PFAM: response regulator receiver; KEGG: mex:Mext_4215 response regulator receiver YP_001927364.1 PFAM: pentapeptide repeat protein; KEGG: mex:Mext_4216 pentapeptide repeat protein YP_001927365.1 KEGG: mex:Mext_4217 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001927366.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: mex:Mext_4218 aminotransferase class I and II YP_001927367.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_4219 protein of unknown function DUF6 transmembrane YP_001927368.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mex:Mext_4220 response regulator receiver YP_001927369.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_4221 GCN5-related N-acetyltransferase YP_001927370.1 PFAM: protein of unknown function DUF983; KEGG: mex:Mext_4222 protein of unknown function DUF983 YP_001927371.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: mex:Mext_4223 L-lactate transport YP_001927372.1 PFAM: manganese containing catalase; KEGG: mex:Mext_4224 manganese containing catalase YP_001927373.1 PFAM: helix-turn-helix domain protein; KEGG: sme:SMc00089 hypothetical protein YP_001927374.1 PFAM: plasmid stabilization system; KEGG: rsh:Rsph17029_2268 transcriptional regulator, XRE family YP_001927375.1 PFAM: squalene/phytoene synthase; KEGG: mex:Mext_4225 squalene/phytoene synthase YP_001927376.1 PFAM: protein of unknown function DUF498; KEGG: mex:Mext_4226 protein of unknown function DUF498 YP_001927377.1 TIGRFAM: protein-export hypothetical protein, SecD/SecF family; protein-export hypothetical protein SecF; PFAM: SecD/SecF/SecDF export hypothetical protein; KEGG: mex:Mext_4227 protein-export hypothetical protein SecF YP_001927378.1 TIGRFAM: protein-export hypothetical protein, SecD/SecF family; protein-export hypothetical protein SecD; PFAM: SecD/SecF/SecDF export hypothetical protein; KEGG: mex:Mext_4228 protein-export hypothetical protein SecD YP_001927379.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: mex:Mext_4229 preprotein translocase, YajC subunit YP_001927380.1 PFAM: protein of unknown function DUF815; KEGG: mex:Mext_4230 protein of unknown function DUF815 YP_001927381.1 PFAM: peptidase M23; KEGG: mex:Mext_4231 peptidase M23B YP_001927382.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; methyltransferase type 11; KEGG: mex:Mext_4232 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001927383.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate YP_001927384.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001927385.1 PFAM: regulatory protein MarR; KEGG: mex:Mext_4235 regulatory protein MarR YP_001927386.1 KEGG: mex:Mext_4236 hypothetical protein YP_001927387.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: mex:Mext_4237 enoyl-CoA hydratase/isomerase YP_001927389.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_001927390.1 KEGG: mex:Mext_4239 hypothetical protein YP_001927391.1 PFAM: RDD domain containing protein; KEGG: mex:Mext_4240 RDD domain containing protein YP_001927392.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate YP_001927393.1 TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: mex:Mext_4242 addiction module killer protein YP_001927394.1 KEGG: mex:Mext_4243 hypothetical protein YP_001927395.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: mex:Mext_4244 transferase hexapeptide repeat containing protein YP_001927396.1 PFAM: protein of unknown function zinc metallopeptidase KEGG: mex:Mext_4245 protein of unknown function zinc metallopeptidase YP_001927397.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: mex:Mext_4246 phage SPO1 DNA polymerase-related protein YP_001927398.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: mex:Mext_4247 electron-transferring-flavoprotein dehydrogenase YP_001927399.1 PFAM: peptidase S58 DmpA; KEGG: mex:Mext_4248 peptidase S58 DmpA YP_001927400.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_4249 RarD protein, DMT superfamily transporter YP_001927401.1 KEGG: mex:Mext_4250 hypothetical protein YP_001927402.1 KEGG: mex:Mext_4251 hypothetical protein YP_001927403.1 TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: mex:Mext_4252 cystathionine beta-lyase YP_001927404.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pap:PSPA7_4195 probable transcriptional regulator YP_001927405.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4338 major facilitator superfamily (MFS_1) transporter YP_001927406.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_4258 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_001927407.1 KEGG: mex:Mext_4259 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001927408.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4260 glycosyl transferase family 2 YP_001927409.1 PFAM: cupin; KEGG: mex:Mext_4261 cupin 2 conserved barrel domain protein YP_001927410.1 KEGG: mex:Mext_4262 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; methyltransferase small; methyltransferase type 11; methyltransferase type 12 YP_001927411.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: mex:Mext_4265 DNA mismatch repair protein MutL YP_001927412.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_4266 acyl-CoA dehydrogenase domain protein YP_001927413.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_4267 ABC transporter YP_001927414.1 KEGG: mex:Mext_4268 alpha/beta hydrolase fold YP_001927415.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: mex:Mext_4269 bifunctional deaminase-reductase domain protein YP_001927416.1 PFAM: OsmC family protein; KEGG: mex:Mext_4270 OsmC family protein YP_001927417.1 PFAM: protein of unknown function DUF336; KEGG: mex:Mext_4271 protein of unknown function DUF336 YP_001927418.1 PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_4272 extracellular solute-binding protein family 5 YP_001927419.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4273 binding-protein-dependent transport systems inner membrane component YP_001927420.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4274 binding-protein-dependent transport systems inner membrane component YP_001927421.1 KEGG: mex:Mext_4275 hypothetical protein YP_001927422.1 PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_4276 major facilitator superfamily MFS_1 YP_001927423.1 PFAM: plasmid stabilization system; KEGG: rso:RSc3224 hypothetical protein YP_001927424.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: ccr:CC_0874 hypothetical protein YP_001927425.1 KEGG: mex:Mext_4277 hypothetical protein YP_001927426.1 PFAM: protein of unknown function DUF1013; KEGG: mex:Mext_4278 protein of unknown function DUF1013 YP_001927427.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4279 LysR substrate-binding YP_001927428.1 stationary phase protein that binds TrpR repressor YP_001927429.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: mex:Mext_4281 thiol:disulfide interchange protein YP_001927430.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: mex:Mext_4282 DNA mismatch repair protein MutS YP_001927431.1 KEGG: mex:Mext_4283 hypothetical protein YP_001927432.1 KEGG: mex:Mext_4284 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases YP_001927433.1 KEGG: mex:Mext_4285 hypothetical protein YP_001927434.1 KEGG: mex:Mext_4286 hypothetical protein YP_001927435.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_4287 glyoxalase/bleomycin resistance protein/dioxygenase YP_001927436.1 TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mex:Mext_4288 tyrosine recombinase XerC YP_001927438.1 PFAM: phosphoglycerate mutase; KEGG: mex:Mext_4289 phosphoglycerate mutase YP_001927439.1 PFAM: protein of unknown function DUF344; KEGG: mex:Mext_4290 protein of unknown function DUF344 YP_001927440.1 PFAM: 3-alpha domain protein; MOSC domain containing protein; KEGG: mex:Mext_4291 MOSC domain containing protein YP_001927441.1 KEGG: mex:Mext_4292 enoyl-acyl carrier protein reductase YP_001927442.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: mex:Mext_4293 heat shock protein DnaJ domain protein YP_001927443.1 KEGG: mex:Mext_4294 hypothetical protein YP_001927444.1 KEGG: mex:Mext_4295 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_001927445.1 PFAM: response regulator receiver; KEGG: mex:Mext_4296 response regulator receiver YP_001927446.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_4297 short-chain dehydrogenase/reductase SDR YP_001927447.1 KEGG: mex:Mext_4298 hypothetical protein YP_001927448.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_4299 NUDIX hydrolase YP_001927449.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_4300 hypothetical protein YP_001927450.1 KEGG: mex:Mext_4301 hypothetical protein YP_001927451.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides YP_001927452.1 TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel; KEGG: mex:Mext_4304 folate-binding protein YgfZ YP_001927453.1 KEGG: mex:Mext_4305 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase YP_001927454.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: mex:Mext_4306 metal-dependent phosphohydrolase HD sub domain YP_001927455.1 KEGG: mex:Mext_4307 hypothetical protein YP_001927456.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: exonuclease VII small subunit; KEGG: mex:Mext_4308 exodeoxyribonuclease VII, small subunit YP_001927457.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_001927458.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: mex:Mext_4310 superoxide dismutase copper/zinc binding YP_001927459.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: mex:Mext_4311 hemolysin A YP_001927460.1 PFAM: (Uracil-5)-methyltransferase; KEGG: mex:Mext_4312 (uracil-5)-methyltransferase YP_001927461.1 KEGG: mex:Mext_4313 capsular polysaccharide biosynthesis protein-like protein YP_001927462.1 KEGG: mex:Mext_4314 hypothetical protein YP_001927463.1 PFAM: protein of unknown function DUF159; KEGG: mex:Mext_4315 protein of unknown function DUF159 YP_001927464.1 PFAM: protein of unknown function DUF482; KEGG: mex:Mext_4316 protein of unknown function DUF482 YP_001927465.1 KEGG: mex:Mext_4317 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001927466.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; methylguanine DNA methyltransferase ribonuclease domain protein; methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: mex:Mext_4318 methylated-DNA--protein-cysteine methyltransferase YP_001927467.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mex:Mext_4319 cation diffusion facilitator family transporter YP_001927468.1 PFAM: histidine triad (HIT) protein; KEGG: mex:Mext_4320 histidine triad (HIT) protein YP_001927469.1 PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_4321 type IV pilus assembly PilZ YP_001927470.1 KEGG: mex:Mext_4322 hypothetical protein YP_001927471.1 PFAM: glycoside hydrolase 15-related; KEGG: mex:Mext_4323 glycoside hydrolase 15-related YP_001927472.1 KEGG: mex:Mext_4324 hypothetical protein YP_001927473.1 KEGG: mex:Mext_4325 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_001927474.1 PFAM: sugar isomerase (SIS); KEGG: mex:Mext_4326 glutamine--fructose-6-phosphate transaminase (isomerizing) YP_001927475.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway YP_001927476.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_4328 endonuclease/exonuclease/phosphatase YP_001927477.1 PFAM: asparaginase/glutaminase; KEGG: mex:Mext_4329 asparaginase YP_001927478.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: mex:Mext_4330 phospholipase D/transphosphatidylase YP_001927479.1 PFAM: hypothetical protein; KEGG: mex:Mext_4331 hypothetical protein YP_001927480.1 KEGG: mex:Mext_4332 hypothetical protein YP_001927481.1 PFAM: surfeit locus 1 family protein; KEGG: mex:Mext_4333 surfeit locus 1 family protein YP_001927482.1 TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: mex:Mext_4334 cytochrome o ubiquinol oxidase subunit IV YP_001927483.1 TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: mex:Mext_4335 cytochrome o ubiquinol oxidase, subunit III YP_001927484.1 KEGG: mex:Mext_4336 cytochrome o ubiquinol oxidase, subunit I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_001927485.1 TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: mex:Mext_4337 ubiquinol oxidase, subunit II YP_001927486.1 PFAM: general substrate transporter; KEGG: mex:Mext_4338 transmembrane transporter protein YP_001927487.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_4339 acriflavin resistance protein YP_001927488.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_4340 efflux transporter, RND family, MFP subunit YP_001927489.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: mex:Mext_4341 efflux transporter, RND family, MFP subunit YP_001927490.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_4342 regulatory protein TetR YP_001927491.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_4343 response regulator receiver YP_001927492.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mex:Mext_4344 ATP-binding region ATPase domain protein YP_001927493.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_4345 regulatory protein LuxR YP_001927494.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_4346 regulatory protein LuxR YP_001927495.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4347 glycosyl transferase family 2 YP_001927496.1 KEGG: mex:Mext_4348 hypothetical protein YP_001927497.1 KEGG: mex:Mext_1332 protein of unknown function DUF1194 YP_001927498.1 PFAM: ApbE family lipoprotein; KEGG: mex:Mext_1333 ApbE family lipoprotein YP_001927499.1 PFAM: FMN-binding domain protein; KEGG: mex:Mext_1334 FMN-binding domain protein YP_001927500.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mex:Mext_1335 40-residue YVTN family beta-propeller repeat protein YP_001927501.1 KEGG: mex:Mext_1336 hypothetical protein YP_001927502.1 KEGG: mex:Mext_1337 cytochrome c550 YP_001927503.1 SMART: extracellular solute-binding protein family 3; KEGG: mex:Mext_1338 extracellular solute-binding protein family 3 YP_001927504.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: pyrrolo-quinoline quinone; KEGG: mex:Mext_1339 PQQ-dependent dehydrogenase, methanol/ethanol family YP_001927505.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4350 LysR substrate-binding YP_001927506.1 KEGG: mex:Mext_4351 hypothetical protein YP_001927507.1 PFAM: protein of unknown function DUF81; KEGG: mex:Mext_4352 protein of unknown function DUF81 YP_001927508.1 KEGG: mex:Mext_4353 hypothetical protein YP_001927509.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_4354 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_001927510.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate YP_001927512.1 KEGG: mex:Mext_1897 hypothetical protein YP_001927513.1 KEGG: pde:Pden_0736 glyoxalase/bleomycin resistance protein/dioxygenase YP_001927514.1 KEGG: mex:Mext_0353 hypothetical protein YP_001927515.1 KEGG: mex:Mext_1187 hypothetical protein YP_001927516.1 KEGG: mex:Mext_0488 hypothetical protein YP_001927517.1 KEGG: mex:Mext_4515 hypothetical protein YP_001927518.1 KEGG: mex:Mext_0810 hypothetical protein YP_001927519.1 KEGG: mex:Mext_3583 hypothetical protein YP_001927520.1 KEGG: acr:Acry_1987 hypothetical protein YP_001927521.1 PFAM: cupin; KEGG: mpt:Mpe_A1426 hypothetical protein YP_001927522.1 PFAM: glycosyl transferase group 1; haloacid dehalogenase; KEGG: mex:Mext_1373 glycosyl transferase group 1 YP_001927523.1 KEGG: mex:Mext_4390 hypothetical protein YP_001927524.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: reh:H16_B1249 esterase/lipase YP_001927525.1 PFAM: cupin; KEGG: mex:Mext_1173 cupin 2 conserved barrel domain protein YP_001927526.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: mex:Mext_1172 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein YP_001927527.1 PFAM: monooxygenase; KEGG: mex:Mext_1171 alkanesulfonate monooxygenase YP_001927528.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_1170 acyl-CoA dehydrogenase domain protein YP_001927530.1 KEGG: mex:Mext_1169 ABC transporter substrate-binding protein YP_001927531.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_1168 binding-protein-dependent transport systems inner membrane component YP_001927532.1 PFAM: ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_1167 ABC transporter YP_001927533.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_001927534.1 PFAM: RNA-binding S4 domain protein; KEGG: mex:Mext_4393 RNA-binding S4 domain protein YP_001927535.1 PFAM: helicase domain protein; KEGG: mex:Mext_4394 helicase domain protein YP_001927536.1 KEGG: mex:Mext_4395 hypothetical protein YP_001927538.1 KEGG: mex:Mext_4396 hypothetical protein YP_001927539.1 PFAM: glucokinase; KEGG: mex:Mext_4399 glucokinase YP_001927540.1 KEGG: mex:Mext_4400 HAD-superfamily hydrolase, subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase YP_001927541.1 PFAM: protein of unknown function DUF427; KEGG: mex:Mext_4401 protein of unknown function DUF427 YP_001927542.1 PFAM: beta-lactamase; KEGG: mex:Mext_4402 beta-lactamase YP_001927543.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: mex:Mext_4404 NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_001927544.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mex:Mext_4405 NADH dehydrogenase (quinone) YP_001927545.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mex:Mext_4406 formate dehydrogenase, alpha subunit YP_001927546.1 KEGG: mex:Mext_4407 hypothetical protein YP_001927547.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4408 LysR substrate-binding YP_001927548.1 KEGG: mex:Mext_4409 hypothetical protein YP_001927549.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: mex:Mext_4410 GTP-binding protein Obg/CgtA YP_001927550.1 KEGG: mex:Mext_4411 hypothetical protein YP_001927551.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_4412 GCN5-related N-acetyltransferase YP_001927552.1 involved in the peptidyltransferase reaction during translation YP_001927553.1 PFAM: ribosomal protein L21; KEGG: mex:Mext_4414 ribosomal protein L21 YP_001927554.1 PFAM: Pirin domain protein; KEGG: pla:Plav_2372 pirin domain protein YP_001927555.1 PFAM: protein of unknown function DUF853 NPT hydrolase KEGG: mex:Mext_4415 protein of unknown function DUF853 NPT hydrolase YP_001927556.1 KEGG: mex:Mext_4416 hypothetical protein YP_001927557.1 KEGG: mex:Mext_4417 hypothetical protein YP_001927558.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4418 major facilitator superfamily MFS_1 YP_001927560.1 KEGG: mex:Mext_4419 hypothetical protein YP_001927561.1 PFAM: Patatin; KEGG: mex:Mext_4420 patatin YP_001927562.1 KEGG: mex:Mext_4421 hypothetical protein YP_001927563.1 KEGG: mex:Mext_4422 hypothetical protein YP_001927564.1 KEGG: mex:Mext_4423 hypothetical protein YP_001927565.1 PFAM: diacylglycerol kinase catalytic region; KEGG: mex:Mext_4424 diacylglycerol kinase catalytic region YP_001927566.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_4425 metallophosphoesterase YP_001927567.1 PFAM: Na+/solute symporter; KEGG: mex:Mext_4426 Na+/solute symporter YP_001927568.1 KEGG: mex:Mext_4427 hypothetical protein YP_001927569.1 KEGG: mex:Mext_4428 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001927570.1 KEGG: mex:Mext_4429 hypothetical protein YP_001927571.1 PFAM: nucleotidyl transferase; KEGG: mex:Mext_4430 nucleotidyl transferase YP_001927572.1 PFAM: aminoglycoside phosphotransferase; protein of unknown function UPF0079; KEGG: mex:Mext_4431 protein of unknown function UPF0079 YP_001927573.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: mex:Mext_4432 ATP-binding region ATPase domain protein YP_001927574.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_001927575.1 KEGG: rrs:RoseRS_0674 hypothetical protein YP_001927576.1 PFAM: protein of unknown function DUF433; KEGG: rrs:RoseRS_0673 protein of unknown function DUF433 YP_001927577.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_4434 AMP-dependent synthetase and ligase YP_001927578.1 PFAM: nitroreductase; KEGG: mex:Mext_4435 nitroreductase YP_001927579.1 TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: mar:MAE_47250 hypothetical protein YP_001927580.1 TIGRFAM: addiction module antidote protein; KEGG: mar:MAE_47260 hypothetical protein YP_001927581.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: mex:Mext_4436 enoyl-CoA hydratase/isomerase YP_001927582.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_4437 endonuclease/exonuclease/phosphatase YP_001927583.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: mex:Mext_4438 phospholipase D/transphosphatidylase YP_001927584.1 TIGRFAM: double-strand break repair protein AddB; KEGG: mex:Mext_4439 double-strand break repair protein AddB YP_001927585.1 TIGRFAM: double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; KEGG: mex:Mext_4440 double-strand break repair helicase AddA YP_001927586.1 PFAM: glucose sorbosone dehydrogenase; KEGG: mex:Mext_4441 glucose sorbosone dehydrogenase YP_001927587.1 TIGRFAM: thioredoxin; PFAM: thioredoxin; KEGG: mex:Mext_4442 thioredoxin YP_001927588.1 KEGG: mex:Mext_4443 porin YP_001927589.1 TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; KEGG: mex:Mext_4444 FolC bifunctional protein YP_001927590.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: mex:Mext_4445 acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_001927591.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_001927592.1 PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; KEGG: mex:Mext_4447 NUDIX hydrolase YP_001927593.1 PFAM: histidine triad (HIT) protein; KEGG: mex:Mext_4448 histidine triad (HIT) protein YP_001927594.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mex:Mext_4449 metal-dependent phosphohydrolase HD sub domain YP_001927595.1 PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_4450 DEAD/DEAH box helicase domain protein YP_001927596.1 KEGG: mex:Mext_4451 hypothetical protein YP_001927597.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mex:Mext_4452 ATP-binding region ATPase domain protein YP_001927598.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_4453 response regulator receiver YP_001927599.1 PFAM: TENA/THI-4 domain protein; KEGG: mex:Mext_4454 TenA/THI-4 domain protein YP_001927600.1 PFAM: amino acid permease-associated region; KEGG: mex:Mext_4455 amino acid permease-associated region YP_001927601.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_4456 beta-lactamase domain protein YP_001927602.1 PFAM: protein of unknown function DUF949; KEGG: mex:Mext_4457 protein of unknown function DUF949 YP_001927603.1 KEGG: mex:Mext_4458 ABC-type multidrug transport system ATPase and permease components-like protein YP_001927604.1 KEGG: mex:Mext_4459 hypothetical protein YP_001927605.1 KEGG: mex:Mext_4460 hypothetical protein YP_001927606.1 PFAM: glutamine amidotransferase class-II; KEGG: mex:Mext_4461 glutamine amidotransferase class-II YP_001927607.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_4462 RNA polymerase sigma factor, sigma-70 family YP_001927608.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4463 ROSMUCR transcriptional regulator YP_001927609.1 KEGG: mex:Mext_4464 hypothetical protein YP_001927610.1 KEGG: mex:Mext_4465 hypothetical protein YP_001927611.1 PFAM: ferredoxin; KEGG: mex:Mext_4466 ferredoxin YP_001927612.1 PFAM: Hpt domain protein; KEGG: mex:Mext_4467 Hpt domain protein YP_001927613.1 KEGG: mex:Mext_4468 hypothetical protein YP_001927614.1 PFAM: helix-turn-helix domain protein; cupin; KEGG: mex:Mext_4469 helix-turn-helix domain protein YP_001927615.1 KEGG: mex:Mext_4470 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1 YP_001927616.1 PFAM: thiamine monophosphate synthase; KEGG: mex:Mext_4471 thiamine-phosphate diphosphorylase YP_001927617.1 KEGG: mex:Mext_4472 hypothetical protein YP_001927618.1 KEGG: mex:Mext_4473 hypothetical protein YP_001927619.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4474 ROSMUCR transcriptional regulator YP_001927620.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis YP_001927621.1 KEGG: mex:Mext_4476 hypothetical protein YP_001927622.1 KEGG: mex:Mext_4478 hypothetical protein YP_001927624.1 PFAM: ribosomal L11 methyltransferase; KEGG: mex:Mext_4479 ribosomal L11 methyltransferase YP_001927625.1 PFAM: creatinase; peptidase M24; KEGG: mex:Mext_4480 peptidase M24 YP_001927626.1 KEGG: tth:TTC1364 hypothetical protein YP_001927627.1 KEGG: mta:Moth_2326 hypothetical protein YP_001927628.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mex:Mext_4481 low molecular weight phosphotyrosine protein phosphatase YP_001927629.1 PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: mex:Mext_4482 aminoglycoside phosphotransferase YP_001927630.1 KEGG: mex:Mext_4483 hypothetical protein YP_001927631.1 KEGG: mex:Mext_4484 hypothetical protein YP_001927632.1 PFAM: ABC transporter; SbmABacA family protein; ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_4485 ABC transporter YP_001927633.1 KEGG: mex:Mext_4486 hypothetical protein YP_001927634.1 KEGG: mex:Mext_4487 hypothetical protein YP_001927635.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_4488 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_001927636.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_4489 glutathione S-transferase domain YP_001927637.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4490 LysR substrate-binding YP_001927638.1 Catalyzes the reduction of sulfite to sulfide, an essential step in the anaerobic sulfate-respiration pathway YP_001927639.1 ferredoxin-dependent assimilatory nitrite reductase YP_001927640.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: mex:Mext_4493 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001927641.1 KEGG: mex:Mext_4494 nitrate ABC transporter, ATPase subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter; SMART: AAA ATPase YP_001927642.1 TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4495 nitrate ABC transporter, inner membrane subunit YP_001927643.1 KEGG: mex:Mext_4496 twin-arginine translocation pathway signal YP_001927644.1 KEGG: mex:Mext_4497 nitrate transport protein YP_001927645.1 PFAM: response regulator receiver; ANTAR domain protein; KEGG: mex:Mext_4498 ANTAR domain protein YP_001927646.1 KEGG: mex:Mext_4499 hypothetical protein YP_001927647.1 PFAM: glycoside hydrolase 15-related; KEGG: mex:Mext_4500 glycoside hydrolase 15-related YP_001927648.1 TIGRFAM: transketolase; PFAM: transketolase; transketolase; KEGG: mex:Mext_4501 transketolase YP_001927649.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; catalyzes isomerization of glucose 6-phosphate and fructose 6-phosphate YP_001927650.1 KEGG: mex:Mext_4503 hypothetical protein YP_001927651.1 KEGG: mex:Mext_4504 hypothetical protein YP_001927652.1 KEGG: mex:Mext_4505 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein YP_001927653.1 KEGG: mex:Mext_4506 hypothetical protein YP_001927654.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_4508 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_001927655.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_4509 efflux transporter, RND family, MFP subunit YP_001927656.1 PFAM: Rhodanese domain protein; KEGG: mex:Mext_4510 rhodanese domain protein YP_001927657.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_4511 glycosyl transferase group 1 YP_001927658.1 KEGG: mex:Mext_4512 hypothetical protein YP_001927659.1 PFAM: autoinducer synthesis protein; KEGG: mex:Mext_4513 autoinducer synthesis protein YP_001927660.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: mex:Mext_4514 autoinducer-binding domain protein YP_001927661.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4518 LysR substrate-binding YP_001927662.1 KEGG: mex:Mext_4519 hypothetical protein YP_001927663.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_4520 acriflavin resistance protein YP_001927664.1 KEGG: mex:Mext_4521 hypothetical protein YP_001927665.1 KEGG: mjl:Mjls_3397 molecular chaperone-like YP_001927666.1 KEGG: mex:Mext_4522 hypothetical protein YP_001927667.1 KEGG: mex:Mext_4523 hypothetical protein YP_001927668.1 PFAM: pyrrolo-quinoline quinone; KEGG: mex:Mext_4524 pyrrolo-quinoline quinone YP_001927669.1 KEGG: mex:Mext_4525 hypothetical protein YP_001927670.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: mex:Mext_4526 histidine kinase dimerisation/phosphoacceptor YP_001927671.1 KEGG: mex:Mext_4527 hypothetical protein YP_001927672.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_4528 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001927673.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_4529 (2Fe-2S)-binding domain protein YP_001927674.1 KEGG: mex:Mext_4530 hypothetical protein YP_001927675.1 KEGG: mex:Mext_4531 hypothetical protein YP_001927676.1 KEGG: mex:Mext_4532 hypothetical protein YP_001927677.1 KEGG: mex:Mext_4533 phosphoenolpyruvate carboxylase YP_001927678.1 KEGG: mex:Mext_4534 hypothetical protein YP_001927679.1 KEGG: mex:Mext_4535 hypothetical protein YP_001927680.1 PFAM: saccharopine dehydrogenase; KEGG: mex:Mext_4536 saccharopine dehydrogenase YP_001927681.1 PFAM: protein of unknown function DUF985; KEGG: mex:Mext_4537 protein of unknown function DUF985 YP_001927682.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: mex:Mext_4538 oxidoreductase domain protein YP_001927683.1 PFAM: protein of unknown function DUF606; KEGG: mex:Mext_4539 protein of unknown function DUF606 YP_001927684.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4540 LysR substrate-binding YP_001927685.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_4541 alcohol dehydrogenase zinc-binding domain protein YP_001927686.1 KEGG: mex:Mext_4542 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; HWE histidine kinase; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001927687.1 PFAM: SH3 type 3 domain protein; KEGG: mex:Mext_4543 SH3 type 3 domain protein YP_001927688.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4544 short-chain dehydrogenase/reductase SDR YP_001927689.1 FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP. YP_001927690.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP YP_001927691.1 PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: mex:Mext_4547 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_001927692.1 Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides YP_001927693.1 KEGG: mex:Mext_4549 hypothetical protein YP_001927694.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: swi:Swit_2513 diguanylate cyclase YP_001927695.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_4551 protein of unknown function UPF0118 YP_001927696.1 KEGG: mex:Mext_4552 hypothetical protein YP_001927697.1 KEGG: mex:Mext_4553 hypothetical protein YP_001927698.1 PFAM: transposase mutator type; KEGG: swi:Swit_4911 transposase, mutator type YP_001927699.1 KEGG: mex:Mext_4553 hypothetical protein YP_001927700.1 PFAM: cupin; KEGG: mex:Mext_4554 cupin 2 conserved barrel domain protein YP_001927701.1 KEGG: mex:Mext_4555 hypothetical protein YP_001927702.1 PFAM: heat shock protein Hsp20; KEGG: mex:Mext_4556 heat shock protein HSP20 YP_001927703.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_4557 alpha/beta hydrolase fold YP_001927705.1 PFAM: Hemolysin-type calcium-binding region; KEGG: mex:Mext_4558 hemolysin-type calcium-binding region YP_001927706.1 TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: mex:Mext_4559 histidinol-phosphate phosphatase YP_001927707.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_4560 protein of unknown function UPF0118 YP_001927708.1 PFAM: LamB/YcsF family protein; KEGG: mex:Mext_4561 LamB/YcsF family protein YP_001927709.1 KEGG: smd:Smed_5419 hypothetical protein YP_001927710.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate YP_001927711.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_4563 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_001927712.1 KEGG: mex:Mext_4564 hypothetical protein YP_001927713.1 KEGG: mex:Mext_4565 MRP protein-like protein YP_001927714.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: mex:Mext_4566 molybdopterin-guanine dinucleotide biosynthesis protein A YP_001927715.1 TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: mex:Mext_4567 DNA gyrase, A subunit YP_001927716.1 PFAM: excinuclease ABC subunit C; KEGG: rpe:RPE_2281 excinuclease ABC, C subunit domain protein YP_001927717.1 KEGG: mex:Mext_4568 porin YP_001927718.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_001927719.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mex:Mext_4570 peptidyl-prolyl cis-trans isomerase cyclophilin type YP_001927720.1 KEGG: mex:Mext_4571 hypothetical protein YP_001927721.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mex:Mext_4572 peptidyl-prolyl cis-trans isomerase cyclophilin type YP_001927722.1 PFAM: response regulator receiver; KEGG: mex:Mext_4573 response regulator receiver YP_001927723.1 KEGG: mex:Mext_4574 hypothetical protein YP_001927724.1 KEGG: mex:Mext_4575 hypothetical protein YP_001927725.1 KEGG: mex:Mext_4576 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_001927726.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1037 LysR substrate-binding YP_001927727.1 PFAM: transmembrane pair domain protein; KEGG: mex:Mext_1038 transmembrane pair domain protein YP_001927729.1 KEGG: sma:SAV7444 hypothetical protein YP_001927730.1 KEGG: rle:RL1378 monovalent cation/H+ antiporter subunit G YP_001927731.1 KEGG: sma:SAV7445 hypothetical protein YP_001927732.1 PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: sma:SAV7446 hypothetical protein YP_001927733.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: sma:SAV7447 dehydrogenase YP_001927734.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sma:SAV7448 NADH-dehydrogenase YP_001927735.1 PFAM: Patatin; KEGG: mex:Mext_4578 patatin YP_001927736.1 KEGG: mex:Mext_4587 hypothetical protein YP_001927737.1 KEGG: mex:Mext_4607 hypothetical protein YP_001927738.1 KEGG: mex:Mext_4608 hypothetical protein YP_001927739.1 KEGG: mex:Mext_4609 hypothetical protein YP_001927740.1 PFAM: hypothetical protein; KEGG: mex:Mext_4878 hypothetical protein YP_001927741.1 KEGG: mex:Mext_1189 ABC-type Co2+ transport system, periplasmic component YP_001927742.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1310 TonB-dependent receptor plug YP_001927743.1 KEGG: mex:Mext_1309 urease subunit gamma; TIGRFAM: urease subunit gamma; PFAM: Urease gamma subunit region YP_001927744.1 KEGG: mex:Mext_1308 urease subunit beta; TIGRFAM: urease subunit beta; PFAM: Urease beta subunit YP_001927745.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_001927746.1 PFAM: camphor resistance CrcB protein; KEGG: mex:Mext_1306 CrcB protein YP_001927747.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling YP_001927748.1 PFAM: UreE urease accessory domain protein; KEGG: mex:Mext_1304 UreE urease accessory domain protein YP_001927749.1 PFAM: Urease accessory protein UreF; KEGG: mex:Mext_1303 urease accessory protein UreF YP_001927750.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: mex:Mext_1302 urease accessory protein UreG YP_001927751.1 PFAM: Urease accessory protein UreD; KEGG: mex:Mext_1301 urease accessory protein UreD YP_001927752.1 TIGRFAM: urea transporter; PFAM: Urea transporter; KEGG: mex:Mext_1300 UreA transporter YP_001927753.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mex:Mext_1299 ammonium transporter YP_001927754.1 PFAM: hypothetical protein of uknown function UCP014873; KEGG: mex:Mext_1191 hypothetical protein of uknown function UCP014873 YP_001927755.1 KEGG: mex:Mext_3827 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_001927756.1 inactive form YP_001927757.1 PFAM: chloride channel core; KEGG: mex:Mext_3829 chloride channel core YP_001927758.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bja:blr7330 AcrB/AcrD/AcrF family protein YP_001927759.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_3832 efflux transporter, RND family, MFP subunit YP_001927762.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: mex:Mext_3833 cytochrome d ubiquinol oxidase, subunit II YP_001927763.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: mex:Mext_3834 cytochrome bd ubiquinol oxidase subunit I YP_001927764.1 PFAM: resolvase; KEGG: mes:Meso_3805 resolvase-like YP_001927765.1 KEGG: mes:Meso_3804 hypothetical protein YP_001927769.1 PFAM: plasmid stabilization system; KEGG: mex:Mext_1517 plasmid stabilization system YP_001927770.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: sme:SMb20062 hypothetical protein YP_001927772.1 KEGG: har:HEAR2205 hypothetical protein YP_001927773.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: eli:ELI_04040 hypothetical protein YP_001927774.1 KEGG: eli:ELI_04045 hypothetical protein YP_001927775.1 KEGG: eli:ELI_04050 hypothetical protein YP_001927776.1 KEGG: nwi:Nwi_0730 type IV secretory pathway VirD4 components YP_001927778.1 KEGG: nwi:Nwi_0729 hypothetical protein YP_001927779.1 PFAM: relaxase/mobilization nuclease family protein; KEGG: nwi:Nwi_0728 hypothetical protein YP_001927780.1 KEGG: nwi:Nwi_0727 hypothetical protein YP_001927781.1 TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: mex:Mext_4611 monovalent cation/proton antiporter, MnhG/PhaG subunit YP_001927782.1 PFAM: multiple resistance and pH regulation protein F; KEGG: mex:Mext_4612 multiple resistance and pH regulation protein F YP_001927783.1 PFAM: cation antiporter; KEGG: mex:Mext_4613 cation antiporter YP_001927784.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone YP_001927785.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_001927786.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+ YP_001927788.1 KEGG: mex:Mext_4617 hypothetical protein YP_001927789.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: mex:Mext_4620 NAD-dependent epimerase/dehydratase YP_001927790.1 KEGG: mex:Mext_4623 hypothetical protein YP_001927791.1 PFAM: condensation domain protein; phosphopantetheine-binding; KEGG: mex:Mext_4624 aspartate racemase YP_001927792.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: mex:Mext_4625 amino acid adenylation domain protein YP_001927794.1 KEGG: mex:Mext_4626 hypothetical protein YP_001927795.1 PFAM: phosphoglycerate mutase; KEGG: mex:Mext_4627 phosphoglycerate mutase YP_001927796.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_4628 aldo/keto reductase YP_001927797.1 PFAM: ATPase AAA; ATPase activities AAA_5; SMART: AAA ATPase; KEGG: mex:Mext_4631 ATPase AAA YP_001927798.1 KEGG: rpa:RPA2264 hypothetical protein YP_001927799.1 PFAM: PilT protein domain protein; KEGG: xau:Xaut_4574 PilT protein domain protein YP_001927800.1 KEGG: mex:Mext_4632 hypothetical protein YP_001927801.1 KEGG: mex:Mext_4633 hypothetical protein YP_001927802.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mex:Mext_4634 sodium/hydrogen exchanger YP_001927803.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation YP_001927804.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_001927805.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mex:Mext_4637 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase YP_001927806.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mex:Mext_4638 UDP-N-acetylmuramyl-tripeptide synthetase YP_001927807.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: mex:Mext_4639 peptidoglycan glycosyltransferase YP_001927808.1 KEGG: mex:Mext_4640 exported protein of unknown function YP_001927809.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: mex:Mext_4641 S-adenosyl-methyltransferase MraW YP_001927810.1 PFAM: plasmid stabilization system; KEGG: cak:Caul_0773 plasmid stabilization system YP_001927811.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: azc:AZC_4557 hypothetical protein YP_001927812.1 KEGG: mex:Mext_4642 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: NAD-dependent DNA ligase YP_001927813.1 KEGG: mex:Mext_4643 hypothetical protein YP_001927814.1 PFAM: protein of unknown function DUF820; KEGG: mex:Mext_4644 protein of unknown function DUF820 YP_001927815.1 PFAM: PfkB domain protein; KEGG: mex:Mext_4645 PfkB domain protein YP_001927816.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: mex:Mext_4646 peptidylprolyl isomerase FKBP-type YP_001927817.1 KEGG: mex:Mext_4647 hypothetical protein YP_001927818.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mex:Mext_4648 L-carnitine dehydratase/bile acid-inducible protein F YP_001927819.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001927820.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_4650 regulatory protein GntR HTH YP_001927821.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: mex:Mext_4651 aromatic amino acid beta-eliminating lyase/threonine aldolase YP_001927822.1 KEGG: mex:Mext_4652 hypothetical protein YP_001927823.1 PFAM: glutamate--cysteine ligase GCS2; KEGG: mex:Mext_4653 glutamate--cysteine ligase GCS2 YP_001927824.1 KEGG: mex:Mext_4654 hypothetical protein YP_001927825.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: mex:Mext_4655 peptidase S10 serine carboxypeptidase YP_001927826.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: mex:Mext_4656 DNA polymerase III chi subunit HolC YP_001927827.1 KEGG: mex:Mext_4657 hypothetical protein YP_001927828.1 PFAM: glutathionylspermidine synthase; KEGG: mex:Mext_4658 glutathionylspermidine synthase YP_001927829.1 KEGG: mex:Mext_4659 integral hypothetical protein YP_001927830.1 PFAM: protein of unknown function DUF350; KEGG: mex:Mext_4660 protein of unknown function DUF350 YP_001927831.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_001927832.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: mex:Mext_4662 preprotein translocase, SecG subunit YP_001927833.1 KEGG: mex:Mext_4663 hypothetical protein YP_001927834.1 KEGG: mex:Mext_4664 hypothetical protein YP_001927835.1 PFAM: triosephosphate isomerase; KEGG: mex:Mext_4666 triose-phosphate isomerase YP_001927836.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mex:Mext_4667 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001927837.1 KEGG: mex:Mext_4668 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like YP_001927838.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4669 chemotaxis sensory transducer YP_001927839.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: mex:Mext_4670 glutamine amidotransferase of anthranilate synthase YP_001927840.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_001927841.1 PFAM: indole-3-glycerol phosphate synthase; KEGG: mex:Mext_4672 indole-3-glycerol-phosphate synthase YP_001927842.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: mex:Mext_4673 molybdenum cofactor biosynthesis protein C YP_001927843.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_4674 molybdenum cofactor synthesis domain protein YP_001927844.1 KEGG: pde:Pden_0484 RelE-like cytotoxic translational repressor of toxin-antitoxin stability system YP_001927845.1 SMART: helix-turn-helix domain protein; KEGG: hne:HNE_1687 hypothetical protein YP_001927846.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP YP_001927847.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis YP_001927848.1 PFAM: protein of unknown function DUF1009; KEGG: mex:Mext_4677 protein of unknown function DUF1009 YP_001927849.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM YP_001927850.1 PFAM: protein of unknown function DUF188; KEGG: mex:Mext_4679 protein of unknown function DUF188 YP_001927851.1 KEGG: mex:Mext_4680 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: citrate synthase YP_001927852.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: mex:Mext_4681 glutamyl-tRNA synthetase YP_001927853.1 PFAM: ComEC/Rec2-related protein; KEGG: mex:Mext_4682 ComEC/Rec2-related protein YP_001927854.1 Represses a number of genes involved in the response to DNA damage YP_001927855.1 PFAM: protein of unknown function DUF1236; KEGG: mex:Mext_4684 protein of unknown function DUF1236 YP_001927856.1 KEGG: lma:LmjF35.0290 hypothetical protein, conserved YP_001927857.1 PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_4685 general substrate transporter YP_001927858.1 PFAM: protein of unknown function DUF849; KEGG: mex:Mext_4686 protein of unknown function DUF849 YP_001927859.1 KEGG: mex:Mext_4687 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_001927860.1 KEGG: mex:Mext_4688 hypothetical protein YP_001927861.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_4689 aldo/keto reductase YP_001927862.1 KEGG: mex:Mext_4690 hypothetical protein YP_001927863.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4691 chemotaxis sensory transducer YP_001927864.1 KEGG: mex:Mext_4692 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_001927865.1 KEGG: mex:Mext_4693 hypothetical protein YP_001927866.1 TIGRFAM: valyl-tRNA synthetase; KEGG: mex:Mext_4694 valyl-tRNA synthetase YP_001927867.1 KEGG: mex:Mext_4695 hypothetical protein YP_001927868.1 TIGRFAM: type I secretion outer hypothetical protein, TolC family; PFAM: outer membrane efflux protein; KEGG: mex:Mext_4696 type I secretion outer hypothetical protein, TolC family YP_001927869.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: mex:Mext_4697 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001927870.1 KEGG: mex:Mext_4703 hypothetical protein YP_001927871.1 KEGG: mex:Mext_0359 hypothetical protein YP_001927872.1 KEGG: mex:Mext_4704 hypothetical protein YP_001927873.1 KEGG: mex:Mext_4705 hypothetical protein YP_001927874.1 KEGG: mex:Mext_4706 hypothetical protein YP_001927875.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; KEGG: mex:Mext_4707 carbohydrate kinase, YjeF related protein YP_001927876.1 KEGG: mex:Mext_4709 hypothetical protein YP_001927877.1 KEGG: mex:Mext_4710 hypothetical protein YP_001927879.1 KEGG: mex:Mext_4711 hypothetical protein YP_001927880.1 KEGG: mex:Mext_4712 hypothetical protein YP_001927881.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_4713 phosphate ABC transporter, periplasmic phosphate-binding protein YP_001927882.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4714 phosphate ABC transporter, inner membrane subunit PstC YP_001927883.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4715 phosphate ABC transporter, inner membrane subunit PstA YP_001927884.1 KEGG: mex:Mext_4716 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter; SMART: AAA ATPase YP_001927885.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: mex:Mext_4717 phosphate transport system regulatory protein PhoU YP_001927886.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_4718 phosphate regulon transcriptional regulatory protein PhoB YP_001927887.1 PFAM: GcrA cell cycle regulator; KEGG: mex:Mext_4719 GcrA cell cycle regulator YP_001927888.1 PFAM: Domain of unknown function DUF1849; KEGG: mex:Mext_4720 domain of unknown function DUF1849 YP_001927889.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_001927890.1 KEGG: mex:Mext_4722 precorrin-6x reductase; TIGRFAM: precorrin-6x reductase; PFAM: precorrin-6x reductase CbiJ/CobK YP_001927891.1 TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: mex:Mext_4723 cobyric acid synthase CobQ YP_001927892.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: mex:Mext_4724 cobalamin biosynthesis protein CobD YP_001927893.1 TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: mex:Mext_4725 L-threonine-O-3-phosphate decarboxylase YP_001927894.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4726 major facilitator superfamily MFS_1 YP_001927895.1 KEGG: mex:Mext_4727 hypothetical protein YP_001927896.1 PFAM: malonyl-CoA decarboxylase; KEGG: mex:Mext_4728 malonyl-CoA decarboxylase YP_001927897.1 PFAM: CsbD family protein; KEGG: mex:Mext_4729 CsbD family protein YP_001927898.1 TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_4730 3-hydroxybutyrate dehydrogenase YP_001927899.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein YP_001927900.1 KEGG: mex:Mext_4732 hypothetical protein YP_001927901.1 PFAM: protein of unknown function DUF949; KEGG: mex:Mext_4733 protein of unknown function DUF949 YP_001927902.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_001927903.1 KEGG: mex:Mext_4735 DNA polymerase, beta domain protein region YP_001927904.1 PFAM: HEPN domain protein; KEGG: sru:SRU_0179 protein of unknown function superfamily YP_001927905.1 TIGRFAM: lytic murein transglycosylase; PFAM: peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_4736 lytic murein transglycosylase YP_001927906.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_001927907.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: mex:Mext_4738 2-nitropropane dioxygenase NPD YP_001927908.1 KEGG: mex:Mext_4739 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_001927909.1 KEGG: mex:Mext_4740 phosphatidylserine decarboxylase related protein; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related YP_001927910.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: AAA ATPase; KEGG: mex:Mext_4741 ABC transporter YP_001927911.1 PFAM: peptidoglycan-binding LysM; KEGG: mex:Mext_4742 peptidoglycan-binding LysM YP_001927912.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_4743 hypothetical protein YP_001927913.1 KEGG: mex:Mext_4744 hypothetical protein YP_001927914.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_001927915.1 KEGG: mex:Mext_4746 hypothetical protein YP_001927916.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: azc:AZC_0538 uncharacterized ACR protein YP_001927917.1 PFAM: CreA family protein; KEGG: mex:Mext_4747 CreA family protein YP_001927918.1 KEGG: mex:Mext_4748 hypothetical protein YP_001927919.1 PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_4749 OmpA/MotB domain protein YP_001927920.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4750 major facilitator superfamily MFS_1 YP_001927921.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: mex:Mext_4751 3-demethylubiquinone-9 3-methyltransferase YP_001927922.1 PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: mex:Mext_4752 methyltransferase type 11 YP_001927923.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_001927924.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_4754 secretion protein HlyD family protein YP_001927925.1 PFAM: protein of unknown function DUF1656; KEGG: mex:Mext_4755 protein of unknown function DUF1656 YP_001927926.1 PFAM: fusaric acid resistance protein conserved region; KEGG: mex:Mext_4756 fusaric acid resistance protein conserved region YP_001927927.1 KEGG: mex:Mext_4757 hypothetical protein YP_001927928.1 KEGG: mex:Mext_4758 hypothetical protein YP_001927929.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_4759 glutathione S-transferase domain YP_001927930.1 TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; WD40 domain protein beta Propeller; KEGG: mex:Mext_4760 Tol-Pal system beta propeller repeat protein TolB YP_001927931.1 TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA; KEGG: mex:Mext_4761 protein TolA YP_001927932.1 PFAM: biopolymer transport protein ExbD/TolR; KEGG: mex:Mext_4762 biopolymer transport protein ExbD/TolR YP_001927933.1 TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: mex:Mext_4763 protein TolQ YP_001927934.1 PFAM: chemotaxis sensory transducer; KEGG: mex:Mext_4764 chemotaxis sensory transducer YP_001927935.1 TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: mex:Mext_4765 tol-pal system-associated acyl-CoA thioesterase YP_001927936.1 KEGG: mex:Mext_4766 hypothetical protein YP_001927937.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_4767 metallophosphoesterase YP_001927938.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_001927939.1 PFAM: peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_4769 peptidoglycan-binding domain 1 protein YP_001927940.1 PFAM: Ferritin Dps family protein; KEGG: mex:Mext_4770 ferritin Dps family protein YP_001927941.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: mex:Mext_4771 GCN5-related N-acetyltransferase YP_001927942.1 PFAM: class II aldolase/adducin family protein; KEGG: mex:Mext_4772 L-fuculose-phosphate aldolase YP_001927943.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4773 ROSMUCR transcriptional regulator YP_001927944.1 PFAM: restriction endonuclease; KEGG: mex:Mext_4774 restriction endonuclease YP_001927945.1 PFAM: PepSY-associated TM helix domain protein; KEGG: mex:Mext_4775 PepSY-associated TM helix domain protein YP_001927946.1 KEGG: mex:Mext_4776 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_001927947.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_4777 adenylyl cyclase class-3/4/guanylyl cyclase YP_001927948.1 KEGG: mex:Mext_4778 uncharacterized relative of glutathione S-transferase MAPEG superfamily-like protein YP_001927949.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mex:Mext_4779 cobyrinic acid ac-diamide synthase YP_001927950.1 KEGG: mex:Mext_4780 hypothetical protein YP_001927951.1 PFAM: endoribonuclease L-PSP; KEGG: jan:Jann_1670 endoribonuclease L-PSP YP_001927952.1 KEGG: mex:Mext_4781 hypothetical protein YP_001927953.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: mex:Mext_4782 chaperonin GroEL YP_001927954.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_001927955.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: mex:Mext_4784 Mg2 transporter protein CorA family protein YP_001927956.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: mex:Mext_4785 multiple antibiotic resistance (MarC)-related protein YP_001927957.1 KEGG: mex:Mext_4786 hypothetical protein involved in the export of O-antigen and teichoic acid-like protein YP_001927958.1 PFAM: FAD linked oxidase domain protein; KEGG: mex:Mext_4787 FAD linked oxidase domain protein YP_001927959.1 PFAM: phosphate transporter; KEGG: mex:Mext_4788 phosphate transporter YP_001927960.1 KEGG: mex:Mext_4789 hypothetical protein YP_001927961.1 KEGG: mex:Mext_4790 hypothetical protein YP_001927962.1 KEGG: mex:Mext_4791 hypothetical protein YP_001927963.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane YP_001927964.1 KEGG: mex:Mext_4793 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase; cupin YP_001927965.1 MDM; functions in conversion of succinate to propionate YP_001927966.1 KEGG: mex:Mext_4795 hypothetical protein YP_001927967.1 PFAM: protein of unknown function DUF817; KEGG: mex:Mext_4796 protein of unknown function DUF817 YP_001927968.1 KEGG: mex:Mext_4797 hypothetical protein YP_001927969.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mex:Mext_4798 2-alkenal reductase YP_001927970.1 PFAM: heat shock protein DnaJ domain protein; KEGG: mex:Mext_4799 heat shock protein DnaJ domain protein YP_001927971.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; sporulation domain protein; KEGG: mex:Mext_4800 serine-type D-Ala-D-Ala carboxypeptidase YP_001927972.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: mex:Mext_4801 ATP-dependent Clp protease adaptor protein ClpS YP_001927973.1 KEGG: mex:Mext_4802 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA; Clp domain protein; ATPase activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase YP_001927974.1 KEGG: mex:Mext_4803 hypothetical protein YP_001927975.1 PFAM: HicB family protein; KEGG: ana:all5276 HicB protein YP_001927976.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine YP_001927977.1 KEGG: mex:Mext_4805 hypothetical protein YP_001927978.1 oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis YP_001927979.1 KEGG: mex:Mext_4807 hypothetical protein YP_001927980.1 KEGG: mex:Mext_4808 hypothetical protein YP_001927981.1 KEGG: mex:Mext_4809 photosynthetic complex assembly protein YP_001927982.1 TIGRFAM: photosynthetic reaction center H subunit; PFAM: Photosynthetic reaction centre H subunit; KEGG: mex:Mext_4810 photosynthetic reaction center H subunit YP_001927983.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: mex:Mext_4811 PucC protein YP_001927984.1 catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine YP_001927985.1 light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production YP_001927986.1 involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; the enzyme from Rhodobacter capsulatus contains an Fe-S cluster; part of a complex with BchI, BchD, and BchH YP_001927987.1 light-independent reduction of protochlorophyllide to form chlorophyllide a YP_001927988.1 light-independent reduction of protochlorophyllide to form chlorophyllide a YP_001927989.1 PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: mex:Mext_4817 2-vinyl bacteriochlorophyllide hydratase YP_001927990.1 PFAM: cobalamin B12-binding domain protein; KEGG: mex:Mext_4818 cobalamin B12-binding YP_001927991.1 KEGG: mex:Mext_4819 transcriptional regulator PpsR; TIGRFAM: PAS sensor protein; transcriptional regulator PpsR; PFAM: helix-turn-helix Fis-type; PAS fold domain protein; SMART: PAS domain containing protein YP_001927992.1 TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: mex:Mext_4820 bacteriochlorophyll/chlorophyll synthetase YP_001927993.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: mex:Mext_4821 PucC protein YP_001927994.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_4822 geranylgeranyl reductase YP_001927995.1 PFAM: TspO/MBR family protein; KEGG: mex:Mext_4823 TspO/MBR family protein YP_001927996.1 KEGG: mex:Mext_4824 hypothetical protein YP_001927997.1 PFAM: cytochrome c class I; KEGG: mex:Mext_4825 gluconate 2-dehydrogenase (acceptor) YP_001927998.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate YP_001927999.1 TIGRFAM: 6-phosphogluconolactonase; KEGG: mex:Mext_4827 6-phosphogluconolactonase YP_001928000.1 KEGG: mex:Mext_4828 hypothetical protein YP_001928001.1 responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA YP_001928002.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mex:Mext_4830 MotA/TolQ/ExbB proton channel YP_001928003.1 PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_4831 OmpA/MotB domain protein YP_001928004.1 PFAM: SCP-like extracellular; KEGG: mex:Mext_4832 SCP-like extracellular YP_001928005.1 PFAM: MscS Mechanosensitive ion channel; KEGG: mex:Mext_4833 MscS mechanosensitive ion channel YP_001928006.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mex:Mext_4834 HNH endonuclease YP_001928008.1 TIGRFAM: outer membrane insertion C-terminal signal; PFAM: porin; KEGG: mex:Mext_4835 porin YP_001928009.1 PFAM: porin opacity type; KEGG: mex:Mext_4836 porin opacity type YP_001928010.1 KEGG: mex:Mext_4837 hypothetical protein YP_001928011.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate YP_001928012.1 PFAM: protein of unknown function DUF81; KEGG: mex:Mext_4839 protein of unknown function DUF81 YP_001928013.1 KEGG: mex:Mext_4840 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA; peptidase M41 FtsH extracellular; ATPase activities AAA_5; SMART: AAA ATPase YP_001928014.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: mex:Mext_4841 tRNA(Ile)-lysidine synthetase YP_001928015.1 TIGRFAM: tol-pal system protein YbgF; KEGG: mex:Mext_4842 tol-pal system protein YbgF YP_001928016.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_4843 peptidoglycan-associated lipoprotein YP_001928017.1 KEGG: mex:Mext_4844 hypothetical protein YP_001928018.1 PFAM: response regulator receiver; KEGG: mex:Mext_4845 response regulator receiver YP_001928019.1 KEGG: mex:Mext_4846 hypothetical protein YP_001928020.1 PFAM: GSCFA domain protein; KEGG: mex:Mext_4847 GSCFA domain protein YP_001928021.1 KEGG: mex:Mext_4848 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase YP_001928023.1 KEGG: mex:Mext_0766 hypothetical protein YP_001928024.1 KEGG: acr:Acry_1987 hypothetical protein YP_001928025.1 KEGG: mex:Mext_4858 hypothetical protein YP_001928026.1 KEGG: mex:Mext_4859 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: hypothetical protein; SMART: helix-turn-helix domain protein; PAC repeat-containing protein YP_001928027.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4861 major facilitator superfamily MFS_1 YP_001928028.1 PFAM: protein of unknown function DUF892; KEGG: mex:Mext_4862 protein of unknown function DUF892 YP_001928029.1 PFAM: protein of unknown function UPF0061; KEGG: mex:Mext_4863 protein of unknown function UPF0061 YP_001928030.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4068 chemotaxis sensory transducer YP_001928031.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: mex:Mext_4864 acetolactate synthase, large subunit, biosynthetic type YP_001928032.1 KEGG: mex:Mext_4865 hypothetical protein YP_001928033.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: mex:Mext_4866 acetolactate synthase, small subunit YP_001928034.1 KEGG: rpc:RPC_3251 transcriptional regulator/antitoxin, MazE YP_001928035.1 PFAM: PemK family protein; KEGG: rpc:RPC_3250 transcriptional modulator of MazE/toxin, MazF YP_001928036.1 PFAM: glutathione S-transferase domain; KEGG: mex:Mext_4867 glutathione S-transferase domain YP_001928037.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase family amidotransferase; PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: mex:Mext_4868 asparagine synthase family amidotransferase YP_001928038.1 KEGG: mex:Mext_4869 glutamine amidotransferase class-II YP_001928039.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_4870 RNA polymerase sigma factor, sigma-70 family YP_001928040.1 KEGG: mex:Mext_4872 hypothetical protein YP_001928041.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: mex:Mext_4873 histidine kinase dimerisation/phosphoacceptor YP_001928042.1 PFAM: response regulator receiver; KEGG: mex:Mext_4874 response regulator receiver YP_001928043.1 KEGG: mex:Mext_4875 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; MHYT domain protein; hypothetical protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein YP_001928044.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_4876 cyclic nucleotide-binding YP_001928045.1 KEGG: mex:Mext_4877 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; response regulator receiver; GAF domain protein; Sigma-70 region 4 type 2; hypothetical protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001928087.1 PFAM: cytochrome P450; KEGG: mex:Mext_4000 cytochrome P450 YP_001928088.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: mex:Mext_4001 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001928089.1 KEGG: rle:pRL70138 putative insertion sequence transposase-like protein YP_001928090.1 PFAM: protein of unknown function DUF417; DoxX family protein; KEGG: bmu:Bmul_3959 protein of unknown function DUF417 YP_001928091.1 PFAM: Resolvase domain; KEGG: zmo:ZMO1455 transposase YP_001928092.1 PFAM: transposase Tn3 family protein; KEGG: acr:Acry_3605 transposase Tn3 family protein YP_001928095.1 TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: mex:Mext_0179 integration host factor, beta subunit YP_001928096.1 PFAM: metallophosphoesterase; KEGG: nha:Nham_3779 metallophosphoesterase YP_001928097.1 KEGG: mex:Mext_3525 hypothetical protein YP_001928098.1 PFAM: plasmid stabilization system; KEGG: atc:AGR_C_2785 hypothetical protein YP_001928099.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: CopG domain protein DNA-binding domain protein; KEGG: atc:AGR_C_2786 hypothetical protein YP_001928100.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: nmu:Nmul_B2810 ParA protein, putative YP_001928101.1 KEGG: psp:PSPPH_A0139 stability/partitioning determinant, putative YP_001928102.1 KEGG: gox:GOX2551 hypothetical protein YP_001928103.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: kra:Krad_4707 resolvase domain YP_001928104.1 KEGG: rle:pRL70138 putative insertion sequence transposase-like protein YP_001928105.1 PFAM: protein of unknown function DUF323; KEGG: afw:Anae109_0564 protein of unknown function DUF323 YP_001928106.1 PFAM: glycosyl transferase group 1; KEGG: maq:Maqu_1445 glycosyl transferase, group 1 YP_001928107.1 PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: mex:Mext_3081 CHAD domain containing protein YP_001928108.1 KEGG: mex:Mext_4797 hypothetical protein YP_001928111.1 PFAM: transposase mutator type; KEGG: swi:Swit_4911 transposase, mutator type