-- dump date 20140619_144838 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 395965000001 SEQ_END SEQ_END NC_011666.1 4305430 4305430 DR NC_011666.1; contig end 4305430..4305430 Methylocella silvestris BL2 YP_002360348.1 CDS dnaA NC_011666.1 362 1882 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 362..1882 Methylocella silvestris BL2 7094256 YP_002360349.1 CDS ruvC NC_011666.1 1925 2455 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 1925..2455 Methylocella silvestris BL2 7092330 YP_002360350.1 CDS Msil_0003 NC_011666.1 2452 3081 D TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA domain protein; DNA recombination protein RuvA domain I; KEGG: bid:Bind_0005 Holliday junction DNA helicase RuvA; Holliday junction DNA helicase RuvA 2452..3081 Methylocella silvestris BL2 7092331 YP_002360351.1 CDS Msil_0004 NC_011666.1 3086 4144 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease complement(3086..4144) Methylocella silvestris BL2 7092332 YP_002360352.1 CDS Msil_0006 NC_011666.1 5278 6039 D KEGG: bid:Bind_0008 uroporphyrinogen III synthase HEM4; uroporphyrinogen III synthase HEM4 5278..6039 Methylocella silvestris BL2 7092334 YP_002360353.1 CDS Msil_0007 NC_011666.1 6143 7375 D KEGG: bbt:BBta_5945 hypothetical protein; hypothetical protein 6143..7375 Methylocella silvestris BL2 7092335 YP_002360354.1 CDS Msil_0008 NC_011666.1 7360 8346 D TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mrd:Mrad2831_2720 40-residue YVTN family beta-propeller repeat protein; 40-residue YVTN family beta-propeller repeat-containing protein 7360..8346 Methylocella silvestris BL2 7092336 YP_002360355.1 CDS Msil_0009 NC_011666.1 8402 9172 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bid:Bind_0009 ABC transporter related; ABC transporter-like protein 8402..9172 Methylocella silvestris BL2 7092337 YP_002360356.1 CDS Msil_0010 NC_011666.1 9174 10016 D PFAM: ABC-2 type transporter; KEGG: bbt:BBta_5948 ABC transporter permease; ABC-2 type transporter 9174..10016 Methylocella silvestris BL2 7092338 YP_002360357.1 CDS Msil_0011 NC_011666.1 10032 10430 R PFAM: cytochrome c class I; KEGG: bid:Bind_0011 cytochrome c class I; cytochrome c class I complement(10032..10430) Methylocella silvestris BL2 7092339 YP_002360358.1 CDS Msil_0012 NC_011666.1 10582 11637 D KEGG: bja:blr6199 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 10582..11637 Methylocella silvestris BL2 7092340 YP_002360359.1 CDS Msil_0014 NC_011666.1 12375 13082 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr6201 ABC transporter ATP-binding protein; ABC transporter-like protein 12375..13082 Methylocella silvestris BL2 7092342 YP_002360360.1 CDS Msil_0015 NC_011666.1 13230 15200 D KEGG: bid:Bind_3491 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; ATP-dependent DNA helicase RecQ 13230..15200 Methylocella silvestris BL2 7092343 YP_002360361.1 CDS Msil_0016 NC_011666.1 15420 17210 D KEGG: bid:Bind_3633 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 15420..17210 Methylocella silvestris BL2 7092344 YP_002360362.1 CDS Msil_0017 NC_011666.1 17215 17604 R KEGG: bte:BTH_II2167 hypothetical protein; hypothetical protein complement(17215..17604) Methylocella silvestris BL2 7092345 YP_002360363.1 CDS Msil_0018 NC_011666.1 17751 18722 D KEGG: bid:Bind_2804 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 17751..18722 Methylocella silvestris BL2 7092346 YP_002360364.1 CDS Msil_0019 NC_011666.1 18722 19666 D PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: bid:Bind_2805 flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein 18722..19666 Methylocella silvestris BL2 7092347 YP_002360365.1 CDS Msil_0020 NC_011666.1 19780 20112 D TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bid:Bind_2806 flagellar motor switch protein FliN; flagellar motor switch protein FliN 19780..20112 Methylocella silvestris BL2 7092348 YP_002360366.1 CDS Msil_0021 NC_011666.1 20114 21148 D PFAM: flagellar motor switch protein FliG; KEGG: bid:Bind_2807 flagellar motor switch protein FliG; flagellar motor switch protein FliG 20114..21148 Methylocella silvestris BL2 7092349 YP_002360367.1 CDS flhB NC_011666.1 21165 22244 D membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 21165..22244 Methylocella silvestris BL2 7092350 YP_002360368.1 CDS Msil_0023 NC_011666.1 22255 22671 D KEGG: bmt:BSUIS_B0126 hypothetical protein; hypothetical protein 22255..22671 Methylocella silvestris BL2 7092351 YP_002360369.1 CDS flgB NC_011666.1 22836 23216 D with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella; flagellar basal body rod protein FlgB 22836..23216 Methylocella silvestris BL2 7092352 YP_002360370.1 CDS flgC NC_011666.1 23220 23642 D with FlgF and B makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod protein FlgC 23220..23642 Methylocella silvestris BL2 7092353 YP_002360371.1 CDS Msil_0026 NC_011666.1 23639 23953 D PFAM: flagellar hook-basal body complex protein FliE; KEGG: bid:Bind_3654 flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex protein FliE 23639..23953 Methylocella silvestris BL2 7092354 YP_002360372.1 CDS flgG NC_011666.1 23974 24762 D makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; flagellar basal body rod protein FlgG 23974..24762 Methylocella silvestris BL2 7092355 YP_002360373.1 CDS Msil_0028 NC_011666.1 24815 25261 D TIGRFAM: flagella basal body P-ring formation protein FlgA; KEGG: bid:Bind_3652 flagellar basal body P-ring biosynthesis protein-like protein; flagella basal body P-ring formation protein FlgA 24815..25261 Methylocella silvestris BL2 7092356 YP_002360374.1 CDS flgI NC_011666.1 25258 26361 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar basal body P-ring protein 25258..26361 Methylocella silvestris BL2 7092357 YP_002360375.1 CDS Msil_0030 NC_011666.1 26437 26970 D KEGG: bid:Bind_3650 hypothetical protein; hypothetical protein 26437..26970 Methylocella silvestris BL2 7092358 YP_002360376.1 CDS Msil_0031 NC_011666.1 26971 27672 D PFAM: flagellar L-ring protein; KEGG: bid:Bind_3649 flagellar L-ring protein; flagellar L-ring protein 26971..27672 Methylocella silvestris BL2 7092359 YP_002360377.1 CDS Msil_0032 NC_011666.1 27885 28391 D PFAM: flagellar basal body-associated protein FliL; KEGG: bid:Bind_3648 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 27885..28391 Methylocella silvestris BL2 7092360 YP_002360378.1 CDS Msil_0033 NC_011666.1 28388 29131 D KEGG: bid:Bind_3647 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP 28388..29131 Methylocella silvestris BL2 7092361 YP_002360379.1 CDS Msil_0034 NC_011666.1 29310 30188 D PFAM: flagellin domain protein; KEGG: bid:Bind_2690 flagellin domain protein; flagellin domain-containing protein 29310..30188 Methylocella silvestris BL2 7092362 YP_002360380.1 CDS fliF NC_011666.1 30326 31966 D the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 30326..31966 Methylocella silvestris BL2 7092363 YP_002360381.1 CDS Msil_0036 NC_011666.1 31963 32595 D KEGG: bja:bll6863 hypothetical protein; hypothetical protein 31963..32595 Methylocella silvestris BL2 7092364 YP_002360382.1 CDS Msil_0037 NC_011666.1 32603 33811 D PFAM: OmpA/MotB domain protein; KEGG: bid:Bind_2687 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 32603..33811 Methylocella silvestris BL2 7092365 YP_002360383.1 CDS Msil_0038 NC_011666.1 33808 35019 D KEGG: bja:bll6861 chemotaxis protein; chemotaxis protein 33808..35019 Methylocella silvestris BL2 7092366 YP_002360384.1 CDS Msil_0039 NC_011666.1 35016 36743 D KEGG: mpo:Mpop_0612 flagellar hook-length control protein; hypothetical protein 35016..36743 Methylocella silvestris BL2 7092367 YP_002360385.1 CDS Msil_0040 NC_011666.1 36712 37275 D PFAM: Lytic transglycosylase catalytic; KEGG: bid:Bind_2684 lytic transglycosylase catalytic; lytic transglycosylase 36712..37275 Methylocella silvestris BL2 7092368 YP_002360386.1 CDS Msil_0041 NC_011666.1 37429 38103 D PFAM: transcriptional regulator domain protein; KEGG: bid:Bind_3387 two component transcriptional regulator, winged helix family; putative winged helix family two component transcriptional regulator 37429..38103 Methylocella silvestris BL2 7092369 YP_002360387.1 CDS flgE NC_011666.1 38578 39822 D the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 38578..39822 Methylocella silvestris BL2 7092370 YP_002360388.1 CDS flgK NC_011666.1 39857 41347 D with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 39857..41347 Methylocella silvestris BL2 7092371 YP_002360389.1 CDS flgL NC_011666.1 41358 42401 D with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar hook-associated protein FlgL 41358..42401 Methylocella silvestris BL2 7091749 YP_002360390.1 CDS flaF NC_011666.1 42527 42874 D acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis regulatory protein FlaF 42527..42874 Methylocella silvestris BL2 7090360 YP_002360391.1 CDS flbT NC_011666.1 42882 43292 D post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis repressor FlbT 42882..43292 Methylocella silvestris BL2 7090361 YP_002360392.1 CDS flgD NC_011666.1 43318 43725 D acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod modification protein 43318..43725 Methylocella silvestris BL2 7090362 YP_002360393.1 CDS fliQ NC_011666.1 43722 43988 D FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar biosynthesis protein FliQ 43722..43988 Methylocella silvestris BL2 7090363 YP_002360394.1 CDS flhA NC_011666.1 44459 46549 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 44459..46549 Methylocella silvestris BL2 7090364 YP_002360395.1 CDS Msil_0050 NC_011666.1 46552 47301 D PFAM: type III secretion system inner membrane R protein; KEGG: bid:Bind_3589 flagellar biosynthesis protein FliR; type III secretion system inner membrane R protein 46552..47301 Methylocella silvestris BL2 7090365 YP_002360396.1 CDS Msil_0051 NC_011666.1 47356 47763 R hypothetical protein complement(47356..47763) Methylocella silvestris BL2 7090366 YP_002360397.1 CDS Msil_0052 NC_011666.1 47834 48325 D KEGG: bid:Bind_3587 hypothetical protein; hypothetical protein 47834..48325 Methylocella silvestris BL2 7090367 YP_002360398.1 CDS Msil_0053 NC_011666.1 48505 48864 D KEGG: bid:Bind_3586 hypothetical protein; hypothetical protein 48505..48864 Methylocella silvestris BL2 7090368 YP_002360399.1 CDS Msil_0054 NC_011666.1 48861 49310 D KEGG: bid:Bind_3585 hypothetical protein; hypothetical protein 48861..49310 Methylocella silvestris BL2 7090369 YP_002360400.1 CDS Msil_0055 NC_011666.1 49361 50113 D KEGG: mrd:Mrad2831_4496 hypothetical protein; hypothetical protein 49361..50113 Methylocella silvestris BL2 7090370 YP_002360401.1 CDS Msil_0056 NC_011666.1 50215 50874 D KEGG: bid:Bind_3584 hypothetical protein; hypothetical protein 50215..50874 Methylocella silvestris BL2 7090371 YP_002360402.1 CDS Msil_0057 NC_011666.1 51046 51495 R PFAM: type IV pilus assembly PilZ; KEGG: bid:Bind_2285 type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(51046..51495) Methylocella silvestris BL2 7090372 YP_002360403.1 CDS Msil_0058 NC_011666.1 52263 53060 D TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bid:Bind_2284 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 52263..53060 Methylocella silvestris BL2 7090373 YP_002360404.1 CDS Msil_0059 NC_011666.1 53133 53825 D TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bid:Bind_2283 molybdate ABC transporter, inner membrane subunit; molybdate ABC transporter inner membrane subunit 53133..53825 Methylocella silvestris BL2 7090374 YP_002360405.1 CDS Msil_0060 NC_011666.1 53822 54910 D KEGG: bid:Bind_2282 molybdate ABC transporter, ATPase subunit; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; molybdate ABC transporter ATPase 53822..54910 Methylocella silvestris BL2 7090375 YP_002360406.1 CDS Msil_0061 NC_011666.1 55061 55810 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cak:Caul_1370 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 55061..55810 Methylocella silvestris BL2 7090376 YP_002360407.1 CDS Msil_0062 NC_011666.1 55871 56212 D SMART: regulatory protein ArsR; KEGG: cak:Caul_1369 putative transcriptional regulator, ArsR family; ArsR family transcriptional regulator 55871..56212 Methylocella silvestris BL2 7090377 YP_002360408.1 CDS Msil_0063 NC_011666.1 56189 56905 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_2267 ABC transporter related; ABC transporter-like protein complement(56189..56905) Methylocella silvestris BL2 7090378 YP_002360409.1 CDS Msil_0064 NC_011666.1 56902 57699 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_2268 ABC transporter related; ABC transporter-like protein complement(56902..57699) Methylocella silvestris BL2 7090379 YP_002360410.1 CDS Msil_0065 NC_011666.1 57696 58544 R PFAM: inner-membrane translocator; KEGG: met:M446_2269 inner-membrane translocator; inner-membrane translocator complement(57696..58544) Methylocella silvestris BL2 7090380 YP_002360411.1 CDS Msil_0066 NC_011666.1 58544 59422 R PFAM: inner-membrane translocator; KEGG: met:M446_2270 inner-membrane translocator; inner-membrane translocator complement(58544..59422) Methylocella silvestris BL2 7090381 YP_002360412.1 CDS Msil_0067 NC_011666.1 59454 60584 R PFAM: Extracellular ligand-binding receptor; KEGG: met:M446_2271 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(59454..60584) Methylocella silvestris BL2 7090382 YP_002360413.1 CDS Msil_0068 NC_011666.1 60879 61571 D KEGG: bid:Bind_3211 hypothetical protein; hypothetical protein 60879..61571 Methylocella silvestris BL2 7090383 YP_002360414.1 CDS Msil_0069 NC_011666.1 61632 61892 R KEGG: met:M446_3447 hypothetical protein; hypothetical protein complement(61632..61892) Methylocella silvestris BL2 7090384 YP_002360415.1 CDS Msil_0070 NC_011666.1 62109 62930 D PFAM: inositol monophosphatase; KEGG: bid:Bind_0915 inositol monophosphatase; inositol monophosphatase 62109..62930 Methylocella silvestris BL2 7090385 YP_002360416.1 CDS Msil_0071 NC_011666.1 63024 63287 D KEGG: azc:AZC_2380 hypothetical protein; hypothetical protein 63024..63287 Methylocella silvestris BL2 7090386 YP_002360417.1 CDS Msil_0072 NC_011666.1 63468 64799 D PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: xau:Xaut_1482 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 63468..64799 Methylocella silvestris BL2 7090387 YP_002360418.1 CDS Msil_0073 NC_011666.1 64854 65075 R KEGG: bid:Bind_0917 hypothetical protein; hypothetical protein complement(64854..65075) Methylocella silvestris BL2 7090388 YP_002360419.1 CDS Msil_0074 NC_011666.1 65345 66112 D PFAM: alpha/beta hydrolase fold; KEGG: bid:Bind_0925 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 65345..66112 Methylocella silvestris BL2 7090389 YP_002360420.1 CDS Msil_0075 NC_011666.1 66254 66649 D KEGG: bid:Bind_0927 hypothetical protein; hypothetical protein 66254..66649 Methylocella silvestris BL2 7090390 YP_002360421.1 CDS Msil_0076 NC_011666.1 66704 67231 D PFAM: transferase hexapeptide repeat containing protein; KEGG: smd:Smed_1693 transferase hexapeptide repeat containing protein; transferase hexapeptide repeat containing protein 66704..67231 Methylocella silvestris BL2 7090391 YP_002360422.1 CDS Msil_0077 NC_011666.1 67497 69890 D KEGG: bid:Bind_2061 putative membrane transporter; putative membrane transporter 67497..69890 Methylocella silvestris BL2 7090392 YP_002360423.1 CDS Msil_0078 NC_011666.1 69954 70460 R KEGG: bid:Bind_2062 hypothetical protein; hypothetical protein complement(69954..70460) Methylocella silvestris BL2 7090393 YP_002360424.1 CDS Msil_0079 NC_011666.1 70578 70898 R KEGG: rpb:RPB_1509 hypothetical protein; hypothetical protein complement(70578..70898) Methylocella silvestris BL2 7090394 YP_002360425.1 CDS Msil_0080 NC_011666.1 70996 72276 R KEGG: bra:BRADO7061 permease; hypothetical protein complement(70996..72276) Methylocella silvestris BL2 7090395 YP_002360426.1 CDS Msil_0081 NC_011666.1 72626 73591 R PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: dvu:DVU0090 GDP-fucose synthetase; NAD-dependent epimerase/dehydratase complement(72626..73591) Methylocella silvestris BL2 7090396 YP_002360427.1 CDS Msil_0082 NC_011666.1 73682 74740 R TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: dsh:Dshi_4139 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase complement(73682..74740) Methylocella silvestris BL2 7090397 YP_002360428.1 CDS Msil_0083 NC_011666.1 75005 77332 R NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme complement(75005..77332) Methylocella silvestris BL2 7090398 YP_002360429.1 CDS panC NC_011666.1 77530 78393 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 77530..78393 Methylocella silvestris BL2 7090399 YP_002360430.1 CDS Msil_0085 NC_011666.1 78421 78744 D PFAM: acylphosphatase; KEGG: rpb:RPB_2369 acylphosphatase; acylphosphatase 78421..78744 Methylocella silvestris BL2 7090400 YP_002360431.1 CDS Msil_0086 NC_011666.1 78875 79054 D hypothetical protein 78875..79054 Methylocella silvestris BL2 7090401 YP_002360432.1 CDS Msil_0087 NC_011666.1 79140 79556 D hypothetical protein 79140..79556 Methylocella silvestris BL2 7090402 YP_002360433.1 CDS Msil_0088 NC_011666.1 79560 80435 D PFAM: beta-lactamase; KEGG: rpt:Rpal_0366 beta-lactamase; beta-lactamase 79560..80435 Methylocella silvestris BL2 7090403 YP_002360434.1 CDS Msil_0090 NC_011666.1 81682 82731 R TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bid:Bind_1312 pseudouridine synthase, RluA family; RluA family pseudouridine synthase complement(81682..82731) Methylocella silvestris BL2 7090405 YP_002360435.1 CDS Msil_0091 NC_011666.1 82787 83707 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bbt:BBta_0549 hypothetical protein; RND family efflux transporter MFP subunit complement(82787..83707) Methylocella silvestris BL2 7090406 YP_002360436.1 CDS Msil_0092 NC_011666.1 83704 84123 R PFAM: protein of unknown function DUF305; KEGG: pde:Pden_0926 protein of unknown function DUF305; hypothetical protein complement(83704..84123) Methylocella silvestris BL2 7090407 YP_002360437.1 CDS Msil_0093 NC_011666.1 85094 86326 D PFAM: polysaccharide export protein; KEGG: bid:Bind_1033 polysaccharide export protein; polysaccharide export protein 85094..86326 Methylocella silvestris BL2 7090410 YP_002360438.1 CDS Msil_0094 NC_011666.1 86677 87972 D PFAM: glycosyl transferase group 1; KEGG: bvi:Bcep1808_6510 glycosyl transferase; group 1 glycosyl transferase 86677..87972 Methylocella silvestris BL2 7090411 YP_002360439.1 CDS Msil_0095 NC_011666.1 87972 88724 D PFAM: protein of unknown function DUF159; KEGG: bid:Bind_2022 protein of unknown function DUF159; hypothetical protein 87972..88724 Methylocella silvestris BL2 7090412 YP_002360440.1 CDS Msil_0096 NC_011666.1 88826 89416 R PFAM: regulatory protein TetR; KEGG: bbt:BBta_2216 TetR family transcriptional regulator; TetR family transcriptional regulator complement(88826..89416) Methylocella silvestris BL2 7090413 YP_002360441.1 CDS Msil_0097 NC_011666.1 89832 90566 D PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: bid:Bind_0920 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 89832..90566 Methylocella silvestris BL2 7090414 YP_002360442.1 CDS Msil_0098 NC_011666.1 90840 91457 D PFAM: autoinducer synthesis protein; KEGG: bid:Bind_0919 autoinducer synthesis protein; autoinducer synthesis protein 90840..91457 Methylocella silvestris BL2 7090415 YP_002360443.1 CDS Msil_0099 NC_011666.1 91816 92568 D PFAM: protein of unknown function DUF81; KEGG: bbt:BBta_4771 hypothetical protein; hypothetical protein 91816..92568 Methylocella silvestris BL2 7090416 YP_002360444.1 CDS Msil_0100 NC_011666.1 92594 93580 D TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bid:Bind_1245 NAD(P)H quinone oxidoreductase, PIG3 family; NAD(P)H quinone oxidoreductase 92594..93580 Methylocella silvestris BL2 7090417 YP_002360445.1 CDS Msil_0101 NC_011666.1 93626 93970 D SMART: regulatory protein ArsR; KEGG: rpa:RPA2256 ArsR family transcriptional regulator ArsR1; ArsR family transcriptional regulator 93626..93970 Methylocella silvestris BL2 7090418 YP_002360446.1 CDS Msil_0102 NC_011666.1 94004 94429 D TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: nwi:Nwi_3125 arsenate reductase; arsenate reductase 94004..94429 Methylocella silvestris BL2 7090419 YP_002360447.1 CDS Msil_0103 NC_011666.1 94471 95523 D TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: rpc:RPC_0616 bile acid:sodium symporter; arsenical-resistance protein 94471..95523 Methylocella silvestris BL2 7090420 YP_002360448.1 CDS Msil_0104 NC_011666.1 95529 96233 D TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: nha:Nham_4428 NADPH-dependent FMN reductase; arsenical resistance protein ArsH 95529..96233 Methylocella silvestris BL2 7090421 YP_002360449.1 CDS rpsD NC_011666.1 96550 97167 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 96550..97167 Methylocella silvestris BL2 7090422 YP_002360450.1 CDS Msil_0106 NC_011666.1 97352 98890 R PFAM: AMP-dependent synthetase and ligase; KEGG: mpo:Mpop_2100 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(97352..98890) Methylocella silvestris BL2 7090423 YP_002360451.1 CDS Msil_0107 NC_011666.1 98909 99910 R KEGG: pol:Bpro_2793 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase complement(98909..99910) Methylocella silvestris BL2 7090424 YP_002360452.1 CDS Msil_0108 NC_011666.1 100292 101551 D PFAM: major facilitator superfamily MFS_1; KEGG: met:M446_1841 major facilitator superfamily MFS_1; major facilitator superfamily protein 100292..101551 Methylocella silvestris BL2 7090425 YP_002360453.1 CDS Msil_0109 NC_011666.1 101686 102564 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bid:Bind_0984 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(101686..102564) Methylocella silvestris BL2 7090426 YP_002360454.1 CDS Msil_0110 NC_011666.1 102656 103864 D KEGG: bid:Bind_0985 bicupin, oxalate decarboxylase family; TIGRFAM: bicupin, oxalate decarboxylase family; PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein; oxalate decarboxylase family bicupin 102656..103864 Methylocella silvestris BL2 7090427 YP_002360455.1 CDS Msil_0111 NC_011666.1 103998 105638 D PFAM: major facilitator superfamily MFS_1; KEGG: mrd:Mrad2831_3578 major facilitator superfamily MFS_1; major facilitator superfamily protein 103998..105638 Methylocella silvestris BL2 7090428 YP_002360456.1 CDS Msil_0112 NC_011666.1 105697 106179 R catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase complement(105697..106179) Methylocella silvestris BL2 7090429 YP_002360457.1 CDS Msil_0113 NC_011666.1 106251 108326 R KEGG: bid:Bind_1116 hypothetical protein; hypothetical protein complement(106251..108326) Methylocella silvestris BL2 7090430 YP_002360458.1 CDS Msil_0114 NC_011666.1 108443 109249 R PFAM: putative RNA methylase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: gvi:glr2042 hypothetical protein; hypothetical protein complement(108443..109249) Methylocella silvestris BL2 7090431 YP_002360459.1 CDS Msil_0115 NC_011666.1 109440 111092 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 109440..111092 Methylocella silvestris BL2 7090432 YP_002360460.1 CDS Msil_0116 NC_011666.1 111144 111302 R KEGG: rpe:RPE_3902 hypothetical protein; hypothetical protein complement(111144..111302) Methylocella silvestris BL2 7090433 YP_002360461.1 CDS Msil_0117 NC_011666.1 111483 112619 R hypothetical protein complement(111483..112619) Methylocella silvestris BL2 7090434 YP_002360462.1 CDS Msil_0118 NC_011666.1 112792 113490 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bid:Bind_0877 phosphoglycolate phosphatase; HAD-superfamily hydrolase complement(112792..113490) Methylocella silvestris BL2 7090435 YP_002360463.1 CDS Msil_0119 NC_011666.1 113678 114076 D KEGG: bid:Bind_0878 hypothetical protein; hypothetical protein 113678..114076 Methylocella silvestris BL2 7090436 YP_002360464.1 CDS Msil_0120 NC_011666.1 114181 114906 D KEGG: bid:Bind_0879 ribose 5-phosphate isomerase; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 114181..114906 Methylocella silvestris BL2 7090437 YP_002360465.1 CDS Msil_0121 NC_011666.1 114992 115546 D KEGG: bid:Bind_0880 hypothetical protein; hypothetical protein 114992..115546 Methylocella silvestris BL2 7090438 YP_002360466.1 CDS Msil_0122 NC_011666.1 115597 117021 D TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bid:Bind_0881 glutathione-disulfide reductase; glutathione-disulfide reductase 115597..117021 Methylocella silvestris BL2 7090439 YP_002360467.1 CDS Msil_0123 NC_011666.1 117059 117595 D KEGG: met:M446_0423 acetyltransferase, CysE/LacA/LpxA/NodL family; CysE/LacA/LpxA/NodL family acetyltransferase 117059..117595 Methylocella silvestris BL2 7090440 YP_002360468.1 CDS Msil_0124 NC_011666.1 117749 119140 D KEGG: bid:Bind_0751 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II; phospho-2-dehydro-3-deoxyheptonate aldolase 117749..119140 Methylocella silvestris BL2 7094254 YP_002360469.1 CDS Msil_0125 NC_011666.1 119313 121043 D NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 119313..121043 Methylocella silvestris BL2 7090441 YP_002360470.1 CDS Msil_0126 NC_011666.1 121053 122423 R PFAM: beta-lactamase; KEGG: bja:blr5513 hypothetical protein; beta-lactamase complement(121053..122423) Methylocella silvestris BL2 7090442 YP_002360471.1 CDS Msil_0127 NC_011666.1 122495 123046 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bpy:Bphyt_1572 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase complement(122495..123046) Methylocella silvestris BL2 7090443 YP_002360472.1 CDS Msil_0128 NC_011666.1 123137 124081 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: mrd:Mrad2831_4719 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(123137..124081) Methylocella silvestris BL2 7090444 YP_002360473.1 CDS Msil_0129 NC_011666.1 124189 125004 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMb20214 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 124189..125004 Methylocella silvestris BL2 7090445 YP_002360474.1 CDS Msil_0130 NC_011666.1 125018 126163 R KEGG: bid:Bind_3673 ceramide glucosyltransferase; ceramide glucosyltransferase complement(125018..126163) Methylocella silvestris BL2 7090446 YP_002360475.1 CDS Msil_0131 NC_011666.1 126283 127644 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 126283..127644 Methylocella silvestris BL2 7090447 YP_002360476.1 CDS Msil_0132 NC_011666.1 127607 128719 R KEGG: bid:Bind_3675 hypothetical protein; hypothetical protein complement(127607..128719) Methylocella silvestris BL2 7090448 YP_002360477.1 CDS Msil_0133 NC_011666.1 128986 129516 D PFAM: CreA family protein; KEGG: bid:Bind_3676 CreA family protein; CreA family protein 128986..129516 Methylocella silvestris BL2 7090449 YP_002360478.1 CDS Msil_0134 NC_011666.1 129670 130095 R KEGG: bid:Bind_0205 hypothetical protein; hypothetical protein complement(129670..130095) Methylocella silvestris BL2 7090450 YP_002360479.1 CDS cysS NC_011666.1 130437 131786 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 130437..131786 Methylocella silvestris BL2 7090451 YP_002360480.1 CDS Msil_0136 NC_011666.1 131783 132286 D PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_1489 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 131783..132286 Methylocella silvestris BL2 7090452 YP_002360481.1 CDS Msil_0137 NC_011666.1 132283 133890 D TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: bid:Bind_1913 2-isopropylmalate synthase/homocitrate synthase family protein; putative alpha-isopropylmalate/homocitrate synthase family transferase 132283..133890 Methylocella silvestris BL2 7090453 YP_002360482.1 CDS Msil_0138 NC_011666.1 133942 135006 R TIGRFAM: TonB family protein; KEGG: bid:Bind_2854 TonB family protein; TonB family protein complement(133942..135006) Methylocella silvestris BL2 7090454 YP_002360483.1 CDS Msil_0139 NC_011666.1 135013 135666 R PFAM: conserved hypothetical protein; KEGG: bid:Bind_1911 hypothetical protein; hypothetical protein complement(135013..135666) Methylocella silvestris BL2 7090455 YP_002360484.1 CDS Msil_0140 NC_011666.1 135842 137860 D PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bid:Bind_1909 ABC transporter related; ABC transporter-like protein 135842..137860 Methylocella silvestris BL2 7090456 YP_002360485.1 CDS Msil_0141 NC_011666.1 138057 138755 D KEGG: bid:Bind_1679 phosphatidylserine decarboxylase related protein; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase 138057..138755 Methylocella silvestris BL2 7090457 YP_002360486.1 CDS Msil_0143 NC_011666.1 139512 140486 D TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: bid:Bind_2929 signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 36K type 139512..140486 Methylocella silvestris BL2 7090459 YP_002360487.1 CDS Msil_0144 NC_011666.1 140640 140930 D TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: bid:Bind_2928 integration host factor, beta subunit; integration host factor subunit beta 140640..140930 Methylocella silvestris BL2 7090460 YP_002360488.1 CDS Msil_0145 NC_011666.1 141063 141389 D KEGG: bid:Bind_2927 hypothetical protein; hypothetical protein 141063..141389 Methylocella silvestris BL2 7090461 YP_002360489.1 CDS Msil_0146 NC_011666.1 141601 142329 D PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: bid:Bind_2926 phosphoribosylanthranilate isomerase; phosphoribosylanthranilate isomerase 141601..142329 Methylocella silvestris BL2 7090462 YP_002360490.1 CDS Msil_0147 NC_011666.1 142460 143713 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 142460..143713 Methylocella silvestris BL2 7090463 YP_002360491.1 CDS Msil_0148 NC_011666.1 143747 145018 R KEGG: rpi:Rpic_0287 putative glucose/sorbosone dehydrogenase; putative glucose/sorbosone dehydrogenase complement(143747..145018) Methylocella silvestris BL2 7090464 YP_002360492.1 CDS Msil_0149 NC_011666.1 145035 146027 R KEGG: bid:Bind_0535 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase complement(145035..146027) Methylocella silvestris BL2 7090465 YP_002360493.1 CDS Msil_0150 NC_011666.1 146260 146454 D KEGG: afe:Lferr_2465 hypothetical protein; hypothetical protein 146260..146454 Methylocella silvestris BL2 7090466 YP_002360494.1 CDS Msil_0151 NC_011666.1 146512 147234 D PFAM: protein of unknown function DUF540; KEGG: bid:Bind_1307 protein of unknown function DUF540; hypothetical protein 146512..147234 Methylocella silvestris BL2 7090467 YP_002360495.1 CDS Msil_0152 NC_011666.1 147236 148243 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: bid:Bind_1308 NADH dehydrogenase (ubiquinone); NADH dehydrogenase (ubiquinone) complement(147236..148243) Methylocella silvestris BL2 7090468 YP_002360496.1 CDS Msil_0153 NC_011666.1 149632 150438 D KEGG: bbt:BBta_6788 hypothetical protein; hypothetical protein 149632..150438 Methylocella silvestris BL2 7090470 YP_002360497.1 CDS Msil_0154 NC_011666.1 150492 150920 R PFAM: protein of unknown function DUF1236; KEGG: met:M446_1280 protein of unknown function DUF1236; hypothetical protein complement(150492..150920) Methylocella silvestris BL2 7090471 YP_002360498.1 CDS Msil_0155 NC_011666.1 151100 151714 D PFAM: 3'-5' exonuclease; KEGG: bid:Bind_0572 3'-5' exonuclease; 3'-5' exonuclease 151100..151714 Methylocella silvestris BL2 7090472 YP_002360499.1 CDS Msil_0156 NC_011666.1 151820 152572 D PFAM: protein of unknown function DUF1239; KEGG: bid:Bind_0571 protein of unknown function DUF1239; hypothetical protein 151820..152572 Methylocella silvestris BL2 7090473 YP_002360500.1 CDS Msil_0157 NC_011666.1 152578 153201 D TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: bid:Bind_0570 OstA family protein; lipopolysaccharide transport periplasmic protein LptA 152578..153201 Methylocella silvestris BL2 7090474 YP_002360501.1 CDS Msil_0158 NC_011666.1 153368 154333 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bid:Bind_0568 ABC transporter related; ABC transporter-like protein 153368..154333 Methylocella silvestris BL2 7090475 YP_002360502.1 CDS Msil_0159 NC_011666.1 154670 156220 D TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: bid:Bind_0567 RNA polymerase, sigma 54 subunit, RpoN; RNA polymerase sigma 54 subunit RpoN 154670..156220 Methylocella silvestris BL2 7090476 YP_002360503.1 CDS Msil_0160 NC_011666.1 156931 157392 D TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bid:Bind_2914 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 156931..157392 Methylocella silvestris BL2 7090477 YP_002360504.1 CDS Msil_0161 NC_011666.1 157399 158430 R PFAM: Glucokinase; KEGG: bid:Bind_2915 glucokinase; glucokinase complement(157399..158430) Methylocella silvestris BL2 7090478 YP_002360505.1 CDS Msil_0162 NC_011666.1 158598 160214 D TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: bid:Bind_2916 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha 158598..160214 Methylocella silvestris BL2 7090479 YP_002360506.1 CDS Msil_0163 NC_011666.1 160222 160920 R PFAM: protein of unknown function DUF125 transmembrane; KEGG: mlo:mlr6622 nodulin 21; hypothetical protein complement(160222..160920) Methylocella silvestris BL2 7090480 YP_002360507.1 CDS Msil_0164 NC_011666.1 160991 161539 R PFAM: cytochrome B561; KEGG: nha:Nham_3894 cytochrome b561; cytochrome B561 complement(160991..161539) Methylocella silvestris BL2 7090481 YP_002360508.1 CDS Msil_0165 NC_011666.1 161632 162177 R TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mag:amb4418 transcription elongation factor GreB; transcription elongation factor GreB complement(161632..162177) Methylocella silvestris BL2 7090482 YP_002360509.1 CDS Msil_0166 NC_011666.1 162258 163607 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bid:Bind_2917 protein of unknown function DUF949; ErfK/YbiS/YcfS/YnhG family protein complement(162258..163607) Methylocella silvestris BL2 7090483 YP_002360510.1 CDS Msil_0167 NC_011666.1 164180 165184 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(164180..165184) Methylocella silvestris BL2 7090484 YP_002360511.1 CDS Msil_0168 NC_011666.1 165349 168633 R PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_A2909 RND multidrug efflux pump, AcrB/AcrD/AcrF family; acriflavin resistance protein complement(165349..168633) Methylocella silvestris BL2 7090485 YP_002360512.1 CDS Msil_0169 NC_011666.1 168635 171745 R PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_A2908 RND multidrug efflux pump, AcrB/AcrD/AcrF family; acriflavin resistance protein complement(168635..171745) Methylocella silvestris BL2 7090486 YP_002360513.1 CDS Msil_0170 NC_011666.1 171792 173144 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: met:M446_4415 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(171792..173144) Methylocella silvestris BL2 7090487 YP_002360514.1 CDS Msil_0171 NC_011666.1 173393 174865 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reu:Reut_A0569 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein complement(173393..174865) Methylocella silvestris BL2 7090488 YP_002360515.1 CDS Msil_0172 NC_011666.1 175178 176062 D PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: bid:Bind_2925 ferric reductase domain protein transmembrane component domain; Ferric reductase transmembrane domain-containing protein 175178..176062 Methylocella silvestris BL2 7090489 YP_002360516.1 CDS Msil_0173 NC_011666.1 176022 176375 R KEGG: bid:Bind_1708 hypothetical protein; hypothetical protein complement(176022..176375) Methylocella silvestris BL2 7090490 YP_002360517.1 CDS Msil_0174 NC_011666.1 176684 177616 R KEGG: bid:Bind_1709 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase complement(176684..177616) Methylocella silvestris BL2 7090491 YP_002360518.1 CDS Msil_0175 NC_011666.1 177839 178246 R KEGG: bid:Bind_1710 hypothetical protein; hypothetical protein complement(177839..178246) Methylocella silvestris BL2 7090492 YP_002360519.1 CDS Msil_0176 NC_011666.1 178550 178819 R KEGG: bid:Bind_1035 hypothetical protein; hypothetical protein complement(178550..178819) Methylocella silvestris BL2 7090493 YP_002360520.1 CDS Msil_0177 NC_011666.1 179627 179752 R hypothetical protein complement(179627..179752) Methylocella silvestris BL2 7090494 YP_002360521.1 CDS Msil_0178 NC_011666.1 179926 180921 R TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bid:Bind_0213 cysteine synthase; cysteine synthase A complement(179926..180921) Methylocella silvestris BL2 7090495 YP_002360522.1 CDS Msil_0179 NC_011666.1 181229 182539 R KEGG: rpe:RPE_1723 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-acetylhomoserine/O-acetylserine sulfhydrylase complement(181229..182539) Methylocella silvestris BL2 7090496 YP_002360523.1 CDS Msil_0180 NC_011666.1 182596 183258 R KEGG: mcc:722552 hypothetical protein LOC722552; hypothetical protein complement(182596..183258) Methylocella silvestris BL2 7090497 YP_002360524.1 CDS Msil_0181 NC_011666.1 183475 183747 R hypothetical protein complement(183475..183747) Methylocella silvestris BL2 7090498 YP_002360525.1 CDS Msil_0182 NC_011666.1 184178 184342 R hypothetical protein complement(184178..184342) Methylocella silvestris BL2 7090499 YP_002360526.1 CDS Msil_0183 NC_011666.1 184472 185230 R KEGG: cti:RALTA_A0936 putative zinc-dependent metallopeptidase; hypothetical protein complement(184472..185230) Methylocella silvestris BL2 7090500 YP_002360527.1 CDS Msil_0184 NC_011666.1 185443 189135 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(185443..189135) Methylocella silvestris BL2 7090501 YP_002360528.1 CDS Msil_0185 NC_011666.1 189532 190737 D PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr0485 hypothetical protein; major facilitator superfamily protein 189532..190737 Methylocella silvestris BL2 7090502 YP_002360529.1 CDS Msil_0186 NC_011666.1 190834 191235 D PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: bid:Bind_1952 NADH:ubiquinone oxidoreductase 17.2 kD subunit; NADH:ubiquinone oxidoreductase 17.2 kD subunit 190834..191235 Methylocella silvestris BL2 7090503 YP_002360530.1 CDS Msil_0187 NC_011666.1 191334 192056 D KEGG: bid:Bind_1951 hypothetical protein; hypothetical protein 191334..192056 Methylocella silvestris BL2 7090504 YP_002360531.1 CDS Msil_0188 NC_011666.1 192430 194004 D KEGG: bid:Bind_2235 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 192430..194004 Methylocella silvestris BL2 7090505 YP_002360532.1 CDS Msil_0189 NC_011666.1 194126 194821 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bid:Bind_2236 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 194126..194821 Methylocella silvestris BL2 7090506 YP_002360533.1 CDS Msil_0190 NC_011666.1 194805 196268 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bid:Bind_2237 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 194805..196268 Methylocella silvestris BL2 7090507 YP_002360534.1 CDS Msil_0191 NC_011666.1 196265 199204 D PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; KEGG: bid:Bind_2238 (glutamate--ammonia-ligase) adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 196265..199204 Methylocella silvestris BL2 7090508 YP_002360535.1 CDS Msil_0192 NC_011666.1 199190 201577 R KEGG: bid:Bind_2033 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase complement(199190..201577) Methylocella silvestris BL2 7090509 YP_002360536.1 CDS Msil_0193 NC_011666.1 201919 202587 R PFAM: O-methyltransferase family 3; KEGG: bid:Bind_1677 O-methyltransferase family 3; O-methyltransferase family protein complement(201919..202587) Methylocella silvestris BL2 7090510 YP_002360537.1 CDS pepN NC_011666.1 202603 205269 R TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: bid:Bind_0850 aminopeptidase N; aminopeptidase N complement(202603..205269) Methylocella silvestris BL2 7090511 YP_002360538.1 CDS Msil_0195 NC_011666.1 205425 205976 D KEGG: bja:bll4707 hypothetical protein; hypothetical protein 205425..205976 Methylocella silvestris BL2 7090512 YP_002360539.1 CDS Msil_0196 NC_011666.1 206016 206993 D TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein; KEGG: xau:Xaut_0031 YVTN beta-propeller repeat-containing protein; 40-residue YVTN family beta-propeller repeat-containing protein 206016..206993 Methylocella silvestris BL2 7090513 YP_002360540.1 CDS Msil_0197 NC_011666.1 206996 208288 R KEGG: bid:Bind_0852 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(206996..208288) Methylocella silvestris BL2 7090514 YP_002360541.1 CDS Msil_0198 NC_011666.1 208335 209759 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bid:Bind_0853 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter complement(208335..209759) Methylocella silvestris BL2 7090515 YP_002360542.1 CDS Msil_0199 NC_011666.1 209910 210350 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bid:Bind_0854 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 209910..210350 Methylocella silvestris BL2 7090516 YP_002360543.1 CDS Msil_0200 NC_011666.1 210344 211117 D KEGG: bid:Bind_1976 HAD-superfamily hydrolase, subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; HAD-superfamily hydrolase 210344..211117 Methylocella silvestris BL2 7090517 YP_002360544.1 CDS Msil_0201 NC_011666.1 211142 211393 R KEGG: bid:Bind_1324 hypothetical protein; hypothetical protein complement(211142..211393) Methylocella silvestris BL2 7090518 YP_002360545.1 CDS Msil_0202 NC_011666.1 211764 212822 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: psa:PST_3017 oxidoreductase, zinc-binding; alcohol dehydrogenase zinc-binding domain-containing protein complement(211764..212822) Methylocella silvestris BL2 7090519 YP_002360546.1 CDS Msil_0203 NC_011666.1 212958 213845 R KEGG: mmi:MMAR_1115 hypothetical protein; hypothetical protein complement(212958..213845) Methylocella silvestris BL2 7090520 YP_002360547.1 CDS Msil_0204 NC_011666.1 214046 215653 R PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: eli:ELI_09960 oxidoreductase, putative; FAD dependent oxidoreductase complement(214046..215653) Methylocella silvestris BL2 7090521 YP_002360548.1 CDS Msil_0205 NC_011666.1 215650 216456 R PFAM: aldo/keto reductase; KEGG: eli:ELI_09965 hypothetical protein; aldo/keto reductase complement(215650..216456) Methylocella silvestris BL2 7090522 YP_002360549.1 CDS Msil_0206 NC_011666.1 216890 219295 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 216890..219295 Methylocella silvestris BL2 7090523 YP_002360550.1 CDS Msil_0207 NC_011666.1 219234 220805 D PFAM: Ppx/GppA phosphatase; KEGG: bid:Bind_1567 Ppx/GppA phosphatase; Ppx/GppA phosphatase 219234..220805 Methylocella silvestris BL2 7090524 YP_002360551.1 CDS Msil_0208 NC_011666.1 220866 222083 R TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: bid:Bind_1389 ribonuclease D; ribonuclease D complement(220866..222083) Methylocella silvestris BL2 7090525 YP_002360552.1 CDS Msil_0209 NC_011666.1 222228 224099 D TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bid:Bind_1396 aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 222228..224099 Methylocella silvestris BL2 7090526 YP_002360553.1 CDS Msil_0210 NC_011666.1 224334 227702 D PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: bid:Bind_2470 transglutaminase domain protein; transglutaminase domain-containing protein 224334..227702 Methylocella silvestris BL2 7090527 YP_002360554.1 CDS Msil_0211 NC_011666.1 227868 232100 R amylomaltase; acts to release glucose from maltodextrins; putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme complement(227868..232100) Methylocella silvestris BL2 7090528 YP_002360555.1 CDS Msil_0212 NC_011666.1 232111 233739 R catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase complement(232111..233739) Methylocella silvestris BL2 7090529 YP_002360556.1 CDS Msil_0213 NC_011666.1 233777 235228 R catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase complement(233777..235228) Methylocella silvestris BL2 7090530 YP_002360557.1 CDS Msil_0214 NC_011666.1 235225 236478 R KEGG: rpb:RPB_0442 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate adenylyltransferase complement(235225..236478) Methylocella silvestris BL2 7090531 YP_002360558.1 CDS Msil_0215 NC_011666.1 236541 238760 R KEGG: mlo:mlr7587 glycogen branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; 1,4-alpha-glucan-branching protein complement(236541..238760) Methylocella silvestris BL2 7090532 YP_002360559.1 CDS Msil_0216 NC_011666.1 238763 241273 R KEGG: pmy:Pmen_2288 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase complement(238763..241273) Methylocella silvestris BL2 7090533 YP_002360560.1 CDS Msil_0217 NC_011666.1 241577 241858 R KEGG: mrd:Mrad2831_5487 hypothetical protein; hypothetical protein complement(241577..241858) Methylocella silvestris BL2 7090534 YP_002360561.1 CDS Msil_0218 NC_011666.1 241937 244540 R KEGG: bra:BRADO6873 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase complement(241937..244540) Methylocella silvestris BL2 7090535 YP_002360562.1 CDS Msil_0219 NC_011666.1 244910 245569 D PFAM: phosphoesterase PA-phosphatase related; KEGG: prw:PsycPRwf_0979 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 244910..245569 Methylocella silvestris BL2 7090536 YP_002360563.1 CDS Msil_0220 NC_011666.1 245581 246093 R PFAM: NUDIX hydrolase; KEGG: mrd:Mrad2831_2073 NUDIX hydrolase; NUDIX hydrolase complement(245581..246093) Methylocella silvestris BL2 7090537 YP_002360564.1 CDS Msil_0221 NC_011666.1 246501 246770 D hypothetical protein 246501..246770 Methylocella silvestris BL2 7090538 YP_002360565.1 CDS Msil_0222 NC_011666.1 246869 247369 R PFAM: protein of unknown function DUF188; KEGG: azc:AZC_4000 hypothetical protein; hypothetical protein complement(246869..247369) Methylocella silvestris BL2 7090539 YP_002360566.1 CDS Msil_0223 NC_011666.1 247556 249073 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: xau:Xaut_1589 DEAD/DEAH box helicase domain-containing protein; DEAD/DEAH box helicase complement(247556..249073) Methylocella silvestris BL2 7090540 YP_002360567.1 CDS Msil_0224 NC_011666.1 249337 251676 D PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: mex:Mext_0993 ornithine decarboxylase; Ornithine decarboxylase 249337..251676 Methylocella silvestris BL2 7090541 YP_002360568.1 CDS Msil_0225 NC_011666.1 251688 252269 R PFAM: GCN5-related N-acetyltransferase; KEGG: mrd:Mrad2831_4403 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(251688..252269) Methylocella silvestris BL2 7090542 YP_002360569.1 CDS Msil_0226 NC_011666.1 252329 253942 D PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mrd:Mrad2831_1595 alpha amylase catalytic region; alpha amylase 252329..253942 Methylocella silvestris BL2 7090543 YP_002360570.1 CDS Msil_0227 NC_011666.1 253958 254809 R PFAM: dienelactone hydrolase; KEGG: met:M446_4585 dienelactone hydrolase; dienelactone hydrolase complement(253958..254809) Methylocella silvestris BL2 7090544 YP_002360571.1 CDS Msil_0228 NC_011666.1 254924 255898 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bpy:Bphyt_4196 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase complement(254924..255898) Methylocella silvestris BL2 7090545 YP_002360572.1 CDS Msil_0229 NC_011666.1 255974 257299 R KEGG: mpo:Mpop_0840 conserved hypothetical protein; putative signal peptide; hypothetical protein complement(255974..257299) Methylocella silvestris BL2 7090546 YP_002360573.1 CDS Msil_0230 NC_011666.1 257296 258186 R KEGG: mpo:Mpop_0839 hypothetical protein; hypothetical protein complement(257296..258186) Methylocella silvestris BL2 7090547 YP_002360574.1 CDS Msil_0231 NC_011666.1 258300 258590 D hypothetical protein 258300..258590 Methylocella silvestris BL2 7090548 YP_002360575.1 CDS Msil_0232 NC_011666.1 258669 260138 D PFAM: glycosyl transferase group 1; KEGG: gox:GOX1607 lipopolysaccharide N-acetylglucosaminyltransferase II; group 1 glycosyl transferase 258669..260138 Methylocella silvestris BL2 7090549 YP_002360576.1 CDS Msil_0233 NC_011666.1 260161 261042 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: xau:Xaut_4571 alpha/beta hydrolase domain-containing protein; Alpha/beta hydrolase fold-3 domain-containing protein complement(260161..261042) Methylocella silvestris BL2 7090550 YP_002360577.1 CDS Msil_0234 NC_011666.1 261163 262128 D PFAM: secretion protein HlyD family protein; KEGG: reu:Reut_B4352 multidrug resistance protein MdtN; secretion protein HlyD family protein 261163..262128 Methylocella silvestris BL2 7090551 YP_002360578.1 CDS Msil_0235 NC_011666.1 262125 263255 D KEGG: bpy:Bphyt_4736 hypothetical protein; hypothetical protein 262125..263255 Methylocella silvestris BL2 7090552 YP_002360579.1 CDS Msil_0236 NC_011666.1 263361 264383 D PFAM: protein of unknown function DUF182; KEGG: rsq:Rsph17025_0331 protein of unknown function DUF182; hypothetical protein 263361..264383 Methylocella silvestris BL2 7090553 YP_002360580.1 CDS Msil_0238 NC_011666.1 266006 266545 R KEGG: rpt:Rpal_2114 hypothetical protein; hypothetical protein complement(266006..266545) Methylocella silvestris BL2 7090555 YP_002360581.1 CDS Msil_0239 NC_011666.1 266641 267486 R PFAM: protein of unknown function DUF344; KEGG: bav:BAV3244 hypothetical protein; hypothetical protein complement(266641..267486) Methylocella silvestris BL2 7090556 YP_002360582.1 CDS Msil_0240 NC_011666.1 267710 273265 D KEGG: mag:amb2967 hypothetical protein; hypothetical protein 267710..273265 Methylocella silvestris BL2 7090557 YP_002360583.1 CDS Msil_0241 NC_011666.1 273289 279096 D PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: mag:amb2966 large extracellular alpha-helical protein; alpha-2-macroglobulin domain-containing protein 273289..279096 Methylocella silvestris BL2 7090558 YP_002360584.1 CDS Msil_0242 NC_011666.1 279056 281488 D PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: mag:amb2965 membrane carboxypeptidase/penicillin-binding protein PbpC; glycosyl transferase family protein 279056..281488 Methylocella silvestris BL2 7090559 YP_002360585.1 CDS Msil_0243 NC_011666.1 281507 282943 D PFAM: short chain fatty acid transporter; KEGG: mpo:Mpop_2304 short chain fatty acid transporter; short chain fatty acid transporter 281507..282943 Methylocella silvestris BL2 7090560 YP_002360586.1 CDS Msil_0244 NC_011666.1 283023 283970 D PFAM: beta-lactamase domain protein; KEGG: mrd:Mrad2831_1965 beta-lactamase domain protein; beta-lactamase domain-containing protein 283023..283970 Methylocella silvestris BL2 7090561 YP_002360587.1 CDS Msil_0245 NC_011666.1 284087 284260 D PFAM: protein of unknown function DUF1328; KEGG: bid:Bind_2406 protein of unknown function DUF1328; hypothetical protein 284087..284260 Methylocella silvestris BL2 7090562 YP_002360588.1 CDS Msil_0246 NC_011666.1 284594 284716 D hypothetical protein 284594..284716 Methylocella silvestris BL2 7090563 YP_002360589.1 CDS Msil_0247 NC_011666.1 284802 285383 D hypothetical protein 284802..285383 Methylocella silvestris BL2 7090564 YP_002360590.1 CDS Msil_0248 NC_011666.1 286097 286957 D hypothetical protein 286097..286957 Methylocella silvestris BL2 7090565 YP_002360591.1 CDS Msil_0249 NC_011666.1 287669 288706 R KEGG: pzu:PHZ_c2369 hypothetical protein; hypothetical protein complement(287669..288706) Methylocella silvestris BL2 7090566 YP_002360592.1 CDS Msil_0250 NC_011666.1 289195 289989 R PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: bid:Bind_3634 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein complement(289195..289989) Methylocella silvestris BL2 7090568 YP_002360593.1 CDS Msil_0251 NC_011666.1 290119 290454 R TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: bid:Bind_2737 phosphotransferase system, phosphocarrier protein HPr; HPr family phosphocarrier protein complement(290119..290454) Methylocella silvestris BL2 7090569 YP_002360594.1 CDS Msil_0252 NC_011666.1 290451 290852 R PFAM: PTS system fructose subfamily IIA component; KEGG: bid:Bind_2738 PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA complement(290451..290852) Methylocella silvestris BL2 7090570 YP_002360595.1 CDS Msil_0253 NC_011666.1 291194 291754 R KEGG: mpo:Mpop_1177 HPr kinase; HPr kinase complement(291194..291754) Methylocella silvestris BL2 7090571 YP_002360596.1 CDS Msil_0254 NC_011666.1 291736 293571 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bid:Bind_2740 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(291736..293571) Methylocella silvestris BL2 7090572 YP_002360597.1 CDS Msil_0255 NC_011666.1 293627 294322 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bid:Bind_2741 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator complement(293627..294322) Methylocella silvestris BL2 7090573 YP_002360598.1 CDS Msil_0256 NC_011666.1 294940 295734 D PFAM: regulatory protein LysR; TOBE domain protein; KEGG: bid:Bind_2034 transcriptional regulator, ModE family; ModE family transcriptional regulator 294940..295734 Methylocella silvestris BL2 7090574 YP_002360599.1 CDS Msil_0257 NC_011666.1 295779 296405 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mca:MCA0486 hypothetical protein; type 11 methyltransferase complement(295779..296405) Methylocella silvestris BL2 7090575 YP_002360600.1 CDS Msil_0258 NC_011666.1 296897 297202 D KEGG: bid:Bind_3550 hypothetical protein; hypothetical protein 296897..297202 Methylocella silvestris BL2 7090576 YP_002360601.1 CDS Msil_0260 NC_011666.1 299363 300397 R KEGG: bid:Bind_1072 putative mRNA 3-end processing factor; putative mRNA 3-end processing factor complement(299363..300397) Methylocella silvestris BL2 7090578 YP_002360602.1 CDS Msil_0261 NC_011666.1 300466 300780 R KEGG: bid:Bind_1073 hypothetical protein; hypothetical protein complement(300466..300780) Methylocella silvestris BL2 7090579 YP_002360603.1 CDS Msil_0262 NC_011666.1 301018 301425 R KEGG: bid:Bind_1074 hypothetical protein; hypothetical protein complement(301018..301425) Methylocella silvestris BL2 7090580 YP_002360604.1 CDS Msil_0263 NC_011666.1 301653 304325 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: bid:Bind_0372 DEAD/H associated domain protein; DEAD/DEAH box helicase 301653..304325 Methylocella silvestris BL2 7090581 YP_002360605.1 CDS Msil_0264 NC_011666.1 304264 304983 D KEGG: bid:Bind_0373 hypothetical protein; hypothetical protein 304264..304983 Methylocella silvestris BL2 7090582 YP_002360606.1 CDS Msil_0265 NC_011666.1 304997 307651 R PFAM: Sel1 domain protein repeat-containing protein; KEGG: met:M446_3098 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein complement(304997..307651) Methylocella silvestris BL2 7090583 YP_002360607.1 CDS Msil_0266 NC_011666.1 307964 308449 D PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bid:Bind_1094 transcriptional regulator, MerR family; MerR family transcriptional regulator 307964..308449 Methylocella silvestris BL2 7090584 YP_002360608.1 CDS Msil_0267 NC_011666.1 308745 309002 D KEGG: bid:Bind_3207 hypothetical protein; hypothetical protein 308745..309002 Methylocella silvestris BL2 7090585 YP_002360609.1 CDS Msil_0268 NC_011666.1 309091 311235 R KEGG: bid:Bind_3192 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein; polyribonucleotide nucleotidyltransferase complement(309091..311235) Methylocella silvestris BL2 7090586 YP_002360610.1 CDS rpsO NC_011666.1 311754 312023 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(311754..312023) Methylocella silvestris BL2 7090587 YP_002360611.1 CDS Msil_0270 NC_011666.1 312461 314143 D KEGG: mlo:mlr1170 hypothetical protein; hypothetical protein 312461..314143 Methylocella silvestris BL2 7090588 YP_002360612.1 CDS Msil_0271 NC_011666.1 314224 314616 R SMART: Calcium-binding EF-hand-containing protein; KEGG: mpo:Mpop_1805 putative signal transduction protein with EFhand domain; calcium-binding domain-containing protein complement(314224..314616) Methylocella silvestris BL2 7090589 YP_002360613.1 CDS Msil_0272 NC_011666.1 314824 315534 R TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: bid:Bind_0258 ExsB protein; exsB protein complement(314824..315534) Methylocella silvestris BL2 7090590 YP_002360614.1 CDS Msil_0273 NC_011666.1 315524 316489 R PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; KEGG: bid:Bind_0257 NUDIX hydrolase; NUDIX hydrolase complement(315524..316489) Methylocella silvestris BL2 7090591 YP_002360615.1 CDS Msil_0274 NC_011666.1 316831 318717 D KEGG: bid:Bind_0256 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 316831..318717 Methylocella silvestris BL2 7090593 YP_002360616.1 CDS Msil_0275 NC_011666.1 318764 319087 D PFAM: conserved hypothetical protein; KEGG: mrd:Mrad2831_3143 hypothetical protein; hypothetical protein 318764..319087 Methylocella silvestris BL2 7090594 YP_002360617.1 CDS Msil_0276 NC_011666.1 319207 319812 D KEGG: mrd:Mrad2831_3145 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; SMART: Toprim sub domain protein; recombination protein RecR 319207..319812 Methylocella silvestris BL2 7090595 YP_002360618.1 CDS Msil_0277 NC_011666.1 319809 320762 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bid:Bind_1406 protein of unknown function DUF6 transmembrane; hypothetical protein complement(319809..320762) Methylocella silvestris BL2 7090596 YP_002360619.1 CDS Msil_0278 NC_011666.1 321010 321375 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: afw:Anae109_1540 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 321010..321375 Methylocella silvestris BL2 7090597 YP_002360620.1 CDS Msil_0279 NC_011666.1 321380 322537 R PFAM: protein of unknown function DUF195; KEGG: bid:Bind_3251 protein of unknown function DUF195; hypothetical protein complement(321380..322537) Methylocella silvestris BL2 7090598 YP_002360621.1 CDS Msil_0280 NC_011666.1 322709 323575 D PFAM: ribonuclease BN; KEGG: bid:Bind_3250 ribonuclease BN; ribonuclease BN 322709..323575 Methylocella silvestris BL2 7090599 YP_002360622.1 CDS Msil_0281 NC_011666.1 323582 324424 R KEGG: bja:blr3608 hypothetical protein; hypothetical protein complement(323582..324424) Methylocella silvestris BL2 7090600 YP_002360623.1 CDS Msil_0282 NC_011666.1 324702 325577 D PFAM: Bacitracin resistance protein BacA; KEGG: bid:Bind_0335 undecaprenol kinase; undecaprenyl-diphosphatase 324702..325577 Methylocella silvestris BL2 7090601 YP_002360624.1 CDS Msil_0283 NC_011666.1 325609 327015 R TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; fumarate hydratase class II; KEGG: bid:Bind_3242 fumarate hydratase, class II; class II fumarate hydratase complement(325609..327015) Methylocella silvestris BL2 7090602 YP_002360625.1 CDS Msil_0284 NC_011666.1 327067 327624 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bid:Bind_3241 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit complement(327067..327624) Methylocella silvestris BL2 7090603 YP_002360626.1 CDS Msil_0285 NC_011666.1 327702 327986 R KEGG: bid:Bind_3240 hypothetical protein; hypothetical protein complement(327702..327986) Methylocella silvestris BL2 7091503 YP_002360627.1 CDS Msil_0286 NC_011666.1 328269 329093 D in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 328269..329093 Methylocella silvestris BL2 7091504 YP_002360628.1 CDS Msil_0287 NC_011666.1 329180 329743 R KEGG: bid:Bind_3238 hypothetical protein; hypothetical protein complement(329180..329743) Methylocella silvestris BL2 7091505 YP_002360629.1 CDS Msil_0288 NC_011666.1 329740 330060 R PFAM: protein of unknown function DUF883 ElaB; KEGG: bid:Bind_3237 hypothetical protein; hypothetical protein complement(329740..330060) Methylocella silvestris BL2 7091506 YP_002360630.1 CDS Msil_0289 NC_011666.1 330758 331246 D PFAM: protein of unknown function DUF892; KEGG: rpe:RPE_1822 protein of unknown function DUF892; hypothetical protein 330758..331246 Methylocella silvestris BL2 7091507 YP_002360631.1 CDS Msil_0290 NC_011666.1 331310 331465 D hypothetical protein 331310..331465 Methylocella silvestris BL2 7091508 YP_002360632.1 CDS Msil_0291 NC_011666.1 331475 332686 R PFAM: Extracellular ligand-binding receptor; KEGG: bid:Bind_3284 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(331475..332686) Methylocella silvestris BL2 7091509 YP_002360633.1 CDS Msil_0292 NC_011666.1 332979 333968 D PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bid:Bind_3497 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 332979..333968 Methylocella silvestris BL2 7091510 YP_002360634.1 CDS Msil_0293 NC_011666.1 334075 334449 D PFAM: protein of unknown function UPF0102; KEGG: bid:Bind_3496 protein of unknown function UPF0102; hypothetical protein 334075..334449 Methylocella silvestris BL2 7091511 YP_002360635.1 CDS Msil_0294 NC_011666.1 334530 335501 D KEGG: bid:Bind_3495 hypothetical protein; hypothetical protein 334530..335501 Methylocella silvestris BL2 7091512 YP_002360636.1 CDS Msil_0295 NC_011666.1 335561 336598 D KEGG: bid:Bind_3494 quinolinate synthetase complex, A subunit; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; quinolinate synthetase complex subunit A 335561..336598 Methylocella silvestris BL2 7091513 YP_002360637.1 CDS Msil_0296 NC_011666.1 336656 338176 D catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 336656..338176 Methylocella silvestris BL2 7091514 YP_002360638.1 CDS Msil_0297 NC_011666.1 338215 339063 D catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 338215..339063 Methylocella silvestris BL2 7091515 YP_002360639.1 CDS Msil_0298 NC_011666.1 339084 339380 R hypothetical protein complement(339084..339380) Methylocella silvestris BL2 7091516 YP_002360640.1 CDS Msil_0299 NC_011666.1 339568 340386 D PFAM: Rhodanese domain protein; KEGG: mlo:mlr5406 hypothetical protein; rhodanese domain-containing protein 339568..340386 Methylocella silvestris BL2 7091517 YP_002360641.1 CDS Msil_0300 NC_011666.1 340398 341801 D TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: mlo:mlr5407 chromate transporter; chromate transporter 340398..341801 Methylocella silvestris BL2 7091518 YP_002360642.1 CDS Msil_0301 NC_011666.1 341807 342280 R PFAM: DoxX family protein; KEGG: bid:Bind_3128 DoxX family protein; DoxX family protein complement(341807..342280) Methylocella silvestris BL2 7091519 YP_002360643.1 CDS Msil_0302 NC_011666.1 342264 343067 R KEGG: azc:AZC_3486 hypothetical protein; hypothetical protein complement(342264..343067) Methylocella silvestris BL2 7091520 YP_002360644.1 CDS Msil_0303 NC_011666.1 343064 343954 R PFAM: protein of unknown function DUF692; KEGG: azc:AZC_3485 hypothetical protein; hypothetical protein complement(343064..343954) Methylocella silvestris BL2 7091521 YP_002360645.1 CDS Msil_0304 NC_011666.1 344012 344308 R KEGG: bid:Bind_3131 hypothetical protein; hypothetical protein complement(344012..344308) Methylocella silvestris BL2 7091522 YP_002360646.1 CDS Msil_0305 NC_011666.1 344503 345060 D Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 344503..345060 Methylocella silvestris BL2 7091523 YP_002360647.1 CDS Msil_0306 NC_011666.1 345057 345689 D PFAM: protein of unknown function DUF1109; KEGG: rpe:RPE_1945 protein of unknown function DUF1109; hypothetical protein 345057..345689 Methylocella silvestris BL2 7091524 YP_002360648.1 CDS Msil_0307 NC_011666.1 345694 347409 R PFAM: AMP-dependent synthetase and ligase; KEGG: bid:Bind_3436 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(345694..347409) Methylocella silvestris BL2 7091525 YP_002360649.1 CDS Msil_0308 NC_011666.1 347598 347876 D KEGG: bid:Bind_3437 hypothetical protein; hypothetical protein 347598..347876 Methylocella silvestris BL2 7091526 YP_002360650.1 CDS mdoD NC_011666.1 347932 349506 D involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D 347932..349506 Methylocella silvestris BL2 7091527 YP_002360651.1 CDS Msil_0310 NC_011666.1 349714 350700 D PFAM: Mg2 transporter protein CorA family protein; KEGG: bid:Bind_3423 Mg2 transporter protein CorA family protein; Mg2 transporter protein CorA family protein 349714..350700 Methylocella silvestris BL2 7091528 YP_002360652.1 CDS Msil_0311 NC_011666.1 350703 351407 D PFAM: pseudouridine synthase; KEGG: bid:Bind_3519 pseudouridine synthase; pseudouridine synthase 350703..351407 Methylocella silvestris BL2 7091529 YP_002360653.1 CDS Msil_0312 NC_011666.1 351414 352382 R PFAM: Sel1 domain protein repeat-containing protein; KEGG: bid:Bind_3521 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein complement(351414..352382) Methylocella silvestris BL2 7091530 YP_002360654.1 CDS Msil_0313 NC_011666.1 352384 353016 R PFAM: thiamine monophosphate synthase; KEGG: bid:Bind_3522 thiamine monophosphate synthase; thiamine monophosphate synthase complement(352384..353016) Methylocella silvestris BL2 7091531 YP_002360655.1 CDS Msil_0314 NC_011666.1 353236 353721 D molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 353236..353721 Methylocella silvestris BL2 7091532 YP_002360656.1 CDS Msil_0315 NC_011666.1 353789 354082 D PFAM: DNA polymerase beta domain protein region; KEGG: mpo:Mpop_1733 DNA polymerase beta domain protein region; DNA polymerase beta domain-containing protein 353789..354082 Methylocella silvestris BL2 7091533 YP_002360657.1 CDS Msil_0316 NC_011666.1 354082 354444 D PFAM: protein of unknown function DUF86; KEGG: mrd:Mrad2831_3537 protein of unknown function DUF86; hypothetical protein 354082..354444 Methylocella silvestris BL2 7091534 YP_002360658.1 CDS Msil_0317 NC_011666.1 354446 356380 R KEGG: bid:Bind_3426 cobalt chelatase, pCobT subunit; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit; SMART: von Willebrand factor type A; cobalt chelatase large subunit complement(354446..356380) Methylocella silvestris BL2 7091535 YP_002360659.1 CDS Msil_0318 NC_011666.1 356464 357462 R KEGG: bid:Bind_3427 cobalt chelatase, pCobS small subunit; TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; cobalt chelatase small subunit complement(356464..357462) Methylocella silvestris BL2 7091536 YP_002360660.1 CDS Msil_0319 NC_011666.1 357542 358141 R PFAM: heat shock protein DnaJ domain protein; KEGG: bid:Bind_3428 heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein complement(357542..358141) Methylocella silvestris BL2 7091537 YP_002360661.1 CDS Msil_0320 NC_011666.1 358254 358580 D PFAM: BolA family protein; KEGG: bid:Bind_3429 BolA family protein; BolA family protein 358254..358580 Methylocella silvestris BL2 7091538 YP_002360662.1 CDS Msil_0321 NC_011666.1 358852 359412 R PFAM: response regulator receiver; KEGG: bid:Bind_3325 two component transcriptional regulator, fis family; response regulator receiver protein complement(358852..359412) Methylocella silvestris BL2 7091540 YP_002360663.1 CDS Msil_0322 NC_011666.1 359699 361033 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bid:Bind_3324 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(359699..361033) Methylocella silvestris BL2 7091541 YP_002360664.1 CDS Msil_0323 NC_011666.1 361409 362692 D TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: bid:Bind_3323 polyhydroxyalkanoate depolymerase, intracellular; polyhydroxyalkanoate depolymerase 361409..362692 Methylocella silvestris BL2 7091542 YP_002360665.1 CDS Msil_0324 NC_011666.1 362755 363546 D PFAM: protein of unknown function DUF45; KEGG: bid:Bind_1260 protein of unknown function DUF45; hypothetical protein 362755..363546 Methylocella silvestris BL2 7091543 YP_002360666.1 CDS rpmB NC_011666.1 363602 363892 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(363602..363892) Methylocella silvestris BL2 7091544 YP_002360667.1 CDS Msil_0326 NC_011666.1 364185 364619 D PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: nar:Saro_3574 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 364185..364619 Methylocella silvestris BL2 7091545 YP_002360668.1 CDS Msil_0327 NC_011666.1 364883 367528 D PFAM: cell divisionFtsK/SpoIIIE; KEGG: bid:Bind_0464 cell divisionFtsK/SpoIIIE; cell division protein FtsK 364883..367528 Methylocella silvestris BL2 7091546 YP_002360669.1 CDS Msil_0328 NC_011666.1 367569 368726 R KEGG: nha:Nham_0684 O-succinylhomoserine (thiol)-lyase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-succinylhomoserine (thiol)-lyase complement(367569..368726) Methylocella silvestris BL2 7091547 YP_002360670.1 CDS Msil_0329 NC_011666.1 368944 369627 D PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: bid:Bind_0445 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 368944..369627 Methylocella silvestris BL2 7091548 YP_002360671.1 CDS Msil_0330 NC_011666.1 369900 370712 D TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bid:Bind_0444 exodeoxyribonuclease III Xth; exodeoxyribonuclease III Xth 369900..370712 Methylocella silvestris BL2 7091549 YP_002360672.1 CDS Msil_0331 NC_011666.1 370725 371177 R PFAM: cyclic nucleotide-binding; KEGG: oan:Oant_0964 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein complement(370725..371177) Methylocella silvestris BL2 7091550 YP_002360673.1 CDS Msil_0332 NC_011666.1 371202 371888 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bid:Bind_0229 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator complement(371202..371888) Methylocella silvestris BL2 7091551 YP_002360674.1 CDS Msil_0333 NC_011666.1 372199 373089 R TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Prophage CP4-57 regulatory; KEGG: xau:Xaut_0048 DNA binding domain-containing protein; DNA binding domain-containing protein complement(372199..373089) Methylocella silvestris BL2 7091552 YP_002360675.1 CDS Msil_0334 NC_011666.1 373279 373818 D KEGG: bid:Bind_0228 hypothetical protein; hypothetical protein 373279..373818 Methylocella silvestris BL2 7091553 YP_002360676.1 CDS Msil_0335 NC_011666.1 373859 374551 R PFAM: alanine racemase domain protein; KEGG: bid:Bind_0226 alanine racemase domain protein; alanine racemase domain-containing protein complement(373859..374551) Methylocella silvestris BL2 7091554 YP_002360677.1 CDS Msil_0336 NC_011666.1 374699 377329 D TIGRFAM: leucyl-tRNA synthetase; KEGG: bid:Bind_0225 leucyl-tRNA synthetase; leucyl-tRNA synthetase 374699..377329 Methylocella silvestris BL2 7091555 YP_002360678.1 CDS Msil_0337 NC_011666.1 377316 377855 D KEGG: bid:Bind_0224 hypothetical protein; hypothetical protein 377316..377855 Methylocella silvestris BL2 7091556 YP_002360679.1 CDS Msil_0338 NC_011666.1 377974 378168 D KEGG: rpe:RPE_1052 integrase, catalytic region; integrase, catalytic region 377974..378168 Methylocella silvestris BL2 7091557 YP_002360680.1 CDS Msil_0339 NC_011666.1 378215 379231 D TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: bid:Bind_0222 DNA polymerase III, delta subunit; DNA polymerase III subunit delta 378215..379231 Methylocella silvestris BL2 7091558 YP_002360681.1 CDS Msil_0340 NC_011666.1 379497 380063 D KEGG: bid:Bind_0221 ATP synthase F1, delta subunit; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; ATP synthase F1 subunit delta 379497..380063 Methylocella silvestris BL2 7091559 YP_002360682.1 CDS Msil_0341 NC_011666.1 380063 381592 D KEGG: met:M446_6637 ATP synthase F1, alpha subunit; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 alpha subunit; ATP synthase F1 subunit alpha 380063..381592 Methylocella silvestris BL2 7091560 YP_002360683.1 CDS Msil_0342 NC_011666.1 381648 382523 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 381648..382523 Methylocella silvestris BL2 7091561 YP_002360684.1 CDS Msil_0343 NC_011666.1 382551 384002 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 382551..384002 Methylocella silvestris BL2 7091562 YP_002360685.1 CDS atpC NC_011666.1 384129 384530 D part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 384129..384530 Methylocella silvestris BL2 7091563 YP_002360686.1 CDS Msil_0345 NC_011666.1 384601 384960 R PFAM: blue (type 1) copper domain protein; KEGG: mab:MAB_4654 hypothetical protein; blue (type 1) copper domain-containing protein complement(384601..384960) Methylocella silvestris BL2 7091564 YP_002360687.1 CDS Msil_0346 NC_011666.1 385207 385509 R hypothetical protein complement(385207..385509) Methylocella silvestris BL2 7091565 YP_002360688.1 CDS Msil_0347 NC_011666.1 385493 385807 R KEGG: dcin:285974.; hypothetical protein complement(385493..385807) Methylocella silvestris BL2 7091566 YP_002360689.1 CDS Msil_0348 NC_011666.1 385890 387659 R PFAM: ferredoxin; KEGG: bbt:BBta_6677 ferredoxin; ferredoxin complement(385890..387659) Methylocella silvestris BL2 7091567 YP_002360690.1 CDS Msil_0349 NC_011666.1 387837 389645 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bid:Bind_0672 ABC transporter related; ABC transporter-like protein 387837..389645 Methylocella silvestris BL2 7091568 YP_002360691.1 CDS Msil_0350 NC_011666.1 389715 390638 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: smt:Smal_2392 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter complement(389715..390638) Methylocella silvestris BL2 7091569 YP_002360692.1 CDS Msil_0351 NC_011666.1 390812 391537 D PFAM: carbonic anhydrase; KEGG: bid:Bind_1187 carbonate dehydratase; carbonate dehydratase 390812..391537 Methylocella silvestris BL2 7091570 YP_002360693.1 CDS Msil_0352 NC_011666.1 391751 392182 D PFAM: CBS domain containing protein; KEGG: mpo:Mpop_2219 putative signal-transduction protein with CBS domains; putative signal transduction protein with CBS domains 391751..392182 Methylocella silvestris BL2 7091571 YP_002360694.1 CDS Msil_0353 NC_011666.1 392289 393254 R PFAM: Patatin; KEGG: met:M446_3230 patatin; patatin complement(392289..393254) Methylocella silvestris BL2 7091572 YP_002360695.1 CDS Msil_0354 NC_011666.1 393471 393584 R hypothetical protein complement(393471..393584) Methylocella silvestris BL2 7091573 YP_002360696.1 CDS Msil_0355 NC_011666.1 393717 394142 R PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: bid:Bind_1579 phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase complement(393717..394142) Methylocella silvestris BL2 7091574 YP_002360697.1 CDS Msil_0356 NC_011666.1 394204 394845 R PFAM: GTP cyclohydrolase I; KEGG: bid:Bind_1576 GTP cyclohydrolase I; GTP cyclohydrolase I complement(394204..394845) Methylocella silvestris BL2 7091575 YP_002360698.1 CDS Msil_0357 NC_011666.1 395074 395523 D KEGG: bid:Bind_1575 nitrogen-fixing NifU domain protein; nitrogen-fixing NifU domain-containing protein 395074..395523 Methylocella silvestris BL2 7091576 YP_002360699.1 CDS Msil_0358 NC_011666.1 395548 396369 R PFAM: MltA-interacting MipA family protein; KEGG: bid:Bind_1574 MltA-interacting MipA family protein; MltA-interacting MipA family protein complement(395548..396369) Methylocella silvestris BL2 7091577 YP_002360700.1 CDS Msil_0360 NC_011666.1 396841 397722 R TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: bid:Bind_1336 RNA methyltransferase, TrmH family, group 3; TrmH family RNA methyltransferase complement(396841..397722) Methylocella silvestris BL2 7091579 YP_002360701.1 CDS Msil_0361 NC_011666.1 397719 397853 R hypothetical protein complement(397719..397853) Methylocella silvestris BL2 7091580 YP_002360702.1 CDS Msil_0362 NC_011666.1 398160 400421 R KEGG: bid:Bind_1135 lipopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; capsular exopolysaccharide family protein complement(398160..400421) Methylocella silvestris BL2 7091582 YP_002360703.1 CDS Msil_0363 NC_011666.1 401027 401422 R KEGG: nwi:Nwi_1792 hypothetical protein; hypothetical protein complement(401027..401422) Methylocella silvestris BL2 7091583 YP_002360704.1 CDS Msil_0364 NC_011666.1 401539 401985 R PFAM: thioesterase superfamily protein; KEGG: mpo:Mpop_1820 thioesterase superfamily protein; thioesterase superfamily protein complement(401539..401985) Methylocella silvestris BL2 7093523 YP_002360705.1 CDS Msil_0365 NC_011666.1 402071 402475 R PFAM: protein of unknown function DUF1311; KEGG: rru:Rru_A0482 hypothetical protein; hypothetical protein complement(402071..402475) Methylocella silvestris BL2 7093524 YP_002360706.1 CDS Msil_0366 NC_011666.1 402492 402830 R PFAM: protein of unknown function DUF1491; KEGG: bid:Bind_1656 protein of unknown function DUF1491; hypothetical protein complement(402492..402830) Methylocella silvestris BL2 7093525 YP_002360707.1 CDS Msil_0367 NC_011666.1 403041 404423 D PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bid:Bind_1655 peptidase M20; hypothetical protein 403041..404423 Methylocella silvestris BL2 7093526 YP_002360708.1 CDS Msil_0369 NC_011666.1 405493 406107 D PFAM: regulatory protein TetR; KEGG: sgr:SGR_6294 TetR family transcriptional regulator; TetR family transcriptional regulator 405493..406107 Methylocella silvestris BL2 7093528 YP_002360709.1 CDS Msil_0371 NC_011666.1 406487 408847 D KEGG: rpe:RPE_3161 hypothetical protein; hypothetical protein 406487..408847 Methylocella silvestris BL2 7093530 YP_002360710.1 CDS Msil_0372 NC_011666.1 408868 410427 R TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: bid:Bind_1651 integral membrane protein MviN; integral membrane protein MviN complement(408868..410427) Methylocella silvestris BL2 7093531 YP_002360711.1 CDS Msil_0373 NC_011666.1 410434 411432 R PFAM: glycosyl transferase family 2; KEGG: bid:Bind_1650 glycosyl transferase family 2; family 2 glycosyl transferase complement(410434..411432) Methylocella silvestris BL2 7093532 YP_002360712.1 CDS Msil_0374 NC_011666.1 411856 412791 D PFAM: YdjC family protein; KEGG: bid:Bind_1647 YdjC family protein; hypothetical protein 411856..412791 Methylocella silvestris BL2 7093533 YP_002360713.1 CDS Msil_0375 NC_011666.1 412802 413566 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_1222 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 412802..413566 Methylocella silvestris BL2 7093534 YP_002360714.1 CDS Msil_0376 NC_011666.1 413738 414487 D PFAM: manganese containing catalase; KEGG: bid:Bind_0288 manganese containing catalase; manganese containing catalase 413738..414487 Methylocella silvestris BL2 7093535 YP_002360715.1 CDS Msil_0377 NC_011666.1 414572 416032 R PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: hne:HNE_1798 deoxyribodipyrimidine photolyase family protein; deoxyribodipyrimidine photo-lyase complement(414572..416032) Methylocella silvestris BL2 7093536 YP_002360716.1 CDS Msil_0378 NC_011666.1 416157 417761 D TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: glutamine amidotransferase class-I; GMP synthase domain protein; ExsB family protein; KEGG: bid:Bind_2895 GMP synthase, large subunit; GMP synthase 416157..417761 Methylocella silvestris BL2 7093537 YP_002360717.1 CDS Msil_0380 NC_011666.1 418678 419475 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pmy:Pmen_1100 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 418678..419475 Methylocella silvestris BL2 7093539 YP_002360718.1 CDS Msil_0381 NC_011666.1 419697 420722 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: mlo:mlr6843 quinone oxidoreductase; alcohol dehydrogenase zinc-binding domain-containing protein complement(419697..420722) Methylocella silvestris BL2 7093540 YP_002360719.1 CDS Msil_0382 NC_011666.1 420715 421167 R PFAM: helix-turn-helix HxlR type; KEGG: bcm:Bcenmc03_3334 HxlR family transcriptional regulator; HxlR family transcriptional regulator complement(420715..421167) Methylocella silvestris BL2 7093541 YP_002360720.1 CDS Msil_0383 NC_011666.1 421288 422004 D KEGG: msm:MSMEG_6830 hypothetical protein; hypothetical protein 421288..422004 Methylocella silvestris BL2 7093542 YP_002360721.1 CDS Msil_0385 NC_011666.1 422469 423203 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bja:bll3991 putative oxidoreductase; short-chain dehydrogenase/reductase SDR complement(422469..423203) Methylocella silvestris BL2 7093544 YP_002360722.1 CDS Msil_0386 NC_011666.1 423493 424389 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bja:blr3992 transcriptional regulatory protein; LysR family transcriptional regulator 423493..424389 Methylocella silvestris BL2 7093545 YP_002360723.1 CDS Msil_0387 NC_011666.1 424838 426046 D PFAM: monooxygenase FAD-binding; KEGG: sco:SCO0486 monooxygenase; monooxygenase 424838..426046 Methylocella silvestris BL2 7093546 YP_002360724.1 CDS Msil_0388 NC_011666.1 426216 426830 D PFAM: regulatory protein TetR; KEGG: msm:MSMEG_3319 repressor protein; TetR family transcriptional regulator 426216..426830 Methylocella silvestris BL2 7093547 YP_002360725.1 CDS Msil_0389 NC_011666.1 426906 427685 R KEGG: mrd:Mrad2831_1422 putative transmembrane anti-sigma factor; putative transmembrane anti-sigma factor complement(426906..427685) Methylocella silvestris BL2 7093548 YP_002360726.1 CDS Msil_0390 NC_011666.1 427685 428227 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor complement(427685..428227) Methylocella silvestris BL2 7093549 YP_002360727.1 CDS Msil_0391 NC_011666.1 428265 428609 R PFAM: blue (type 1) copper domain protein; KEGG: xau:Xaut_0975 blue (type1) copper domain-containing protein; blue (type 1) copper domain-containing protein complement(428265..428609) Methylocella silvestris BL2 7093550 YP_002360728.1 CDS Msil_0392 NC_011666.1 428621 429562 R PFAM: metallophosphoesterase; KEGG: xau:Xaut_0974 metallophosphoesterase; metallophosphoesterase complement(428621..429562) Methylocella silvestris BL2 7093551 YP_002360729.1 CDS Msil_0393 NC_011666.1 429726 430589 D TIGRFAM: pyridoxal kinase; PFAM: phosphomethylpyrimidine kinase type-1; KEGG: bja:blr4233 putative pyridoxine kinase; pyridoxal kinase 429726..430589 Methylocella silvestris BL2 7093552 YP_002360730.1 CDS Msil_0394 NC_011666.1 430654 431499 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bid:Bind_1325 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 430654..431499 Methylocella silvestris BL2 7093553 YP_002360731.1 CDS Msil_0395 NC_011666.1 431472 432890 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rpd:RPD_1026 major facilitator transporter; major facilitator superfamily protein complement(431472..432890) Methylocella silvestris BL2 7093554 YP_002360732.1 CDS Msil_0396 NC_011666.1 433021 433860 D KEGG: bid:Bind_1326 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 433021..433860 Methylocella silvestris BL2 7093555 YP_002360733.1 CDS Msil_0397 NC_011666.1 433868 434254 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pde:Pden_0736 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 433868..434254 Methylocella silvestris BL2 7093556 YP_002360734.1 CDS Msil_0398 NC_011666.1 434267 435832 R KEGG: bid:Bind_1238 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit complement(434267..435832) Methylocella silvestris BL2 7093557 YP_002360735.1 CDS Msil_0399 NC_011666.1 435908 436876 R KEGG: nha:Nham_0970 hypothetical protein; hypothetical protein complement(435908..436876) Methylocella silvestris BL2 7093558 YP_002360736.1 CDS Msil_0400 NC_011666.1 437009 437725 R KEGG: mpo:Mpop_3920 uncharacterized protein-like protein; hypothetical protein complement(437009..437725) Methylocella silvestris BL2 7093559 YP_002360737.1 CDS Msil_0401 NC_011666.1 437722 438270 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_3888 RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 subunit complement(437722..438270) Methylocella silvestris BL2 7093560 YP_002360738.1 CDS Msil_0402 NC_011666.1 438391 440079 R PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: pol:Bpro_2149 sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(438391..440079) Methylocella silvestris BL2 7093561 YP_002360739.1 CDS Msil_0403 NC_011666.1 440201 441499 R KEGG: bid:Bind_1241 hypothetical protein; hypothetical protein complement(440201..441499) Methylocella silvestris BL2 7093562 YP_002360740.1 CDS Msil_0404 NC_011666.1 441609 442508 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_1079 transcriptional regulator; LysR family transcriptional regulator complement(441609..442508) Methylocella silvestris BL2 7093563 YP_002360741.1 CDS Msil_0405 NC_011666.1 442505 443938 R PFAM: glycoside hydrolase 15-related; KEGG: rru:Rru_A3302 glucan 1,4-alpha-glucosidase; glucan 1,4-alpha-glucosidase complement(442505..443938) Methylocella silvestris BL2 7093564 YP_002360742.1 CDS Msil_0406 NC_011666.1 443935 445197 R KEGG: rru:Rru_A3301 hypothetical protein; hypothetical protein complement(443935..445197) Methylocella silvestris BL2 7093565 YP_002360743.1 CDS Msil_0407 NC_011666.1 445236 447065 R PFAM: SbmABacA family protein; ABC transporter domain protein; KEGG: rru:Rru_A3300 ABC transporter component; ABC transporter domain-containing protein complement(445236..447065) Methylocella silvestris BL2 7093566 YP_002360744.1 CDS Msil_0408 NC_011666.1 447294 449435 D PFAM: glycoside hydrolase family 3 domain protein; KEGG: rru:Rru_A3299 glycoside hydrolase family protein; glycoside hydrolase family 3 447294..449435 Methylocella silvestris BL2 7093567 YP_002360745.1 CDS Msil_0409 NC_011666.1 449432 450076 R PFAM: Glutathione S-transferase domain; KEGG: pla:Plav_0647 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein complement(449432..450076) Methylocella silvestris BL2 7093568 YP_002360746.1 CDS Msil_0410 NC_011666.1 450455 451921 R PFAM: beta-lactamase domain protein; KEGG: gvi:glr1803 unknown protein; beta-lactamase domain-containing protein complement(450455..451921) Methylocella silvestris BL2 7093569 YP_002360747.1 CDS Msil_0411 NC_011666.1 452022 453386 R KEGG: pfl:PFL_0214 hypothetical protein; hypothetical protein complement(452022..453386) Methylocella silvestris BL2 7093570 YP_002360748.1 CDS Msil_0412 NC_011666.1 453583 454332 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bid:Bind_2312 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(453583..454332) Methylocella silvestris BL2 7093571 YP_002360749.1 CDS Msil_0413 NC_011666.1 454470 455945 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(454470..455945) Methylocella silvestris BL2 7093572 YP_002360750.1 CDS Msil_0414 NC_011666.1 456190 456804 R PFAM: Colicin V production protein; KEGG: bid:Bind_2310 colicin V production protein; colicin V production protein complement(456190..456804) Methylocella silvestris BL2 7093573 YP_002360751.1 CDS Msil_0415 NC_011666.1 457011 458423 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(457011..458423) Methylocella silvestris BL2 7093574 YP_002360752.1 CDS Msil_0416 NC_011666.1 458461 459957 R KEGG: bid:Bind_2307 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; replicative DNA helicase complement(458461..459957) Methylocella silvestris BL2 7093575 YP_002360753.1 CDS Msil_0417 NC_011666.1 460201 460917 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mms:mma_1043 AraC family transcriptional regulator; AraC family transcriptional regulator 460201..460917 Methylocella silvestris BL2 7093576 YP_002360754.1 CDS Msil_0418 NC_011666.1 460988 461428 D PFAM: protein of unknown function DUF606; KEGG: bur:Bcep18194_B0608 hypothetical protein; hypothetical protein 460988..461428 Methylocella silvestris BL2 7093577 YP_002360755.1 CDS Msil_0419 NC_011666.1 461462 461692 R hypothetical protein complement(461462..461692) Methylocella silvestris BL2 7093578 YP_002360756.1 CDS Msil_0420 NC_011666.1 461843 462934 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(461843..462934) Methylocella silvestris BL2 7093579 YP_002360757.1 CDS Msil_0421 NC_011666.1 463042 464031 D PFAM: Glutathione S-transferase domain; KEGG: bid:Bind_1210 glutathione S-transferase domain; glutathione S-transferase domain-containing protein 463042..464031 Methylocella silvestris BL2 7093580 YP_002360758.1 CDS Msil_0422 NC_011666.1 464038 464352 R KEGG: bid:Bind_1211 hypothetical protein; hypothetical protein complement(464038..464352) Methylocella silvestris BL2 7093581 YP_002360759.1 CDS Msil_0423 NC_011666.1 464463 464834 D PFAM: response regulator receiver; KEGG: bid:Bind_1212 response regulator receiver protein; response regulator receiver protein 464463..464834 Methylocella silvestris BL2 7093582 YP_002360760.1 CDS Msil_0424 NC_011666.1 464878 466287 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: rpe:RPE_3385 response regulator PleD; response regulator receiver modulated diguanylate cyclase 464878..466287 Methylocella silvestris BL2 7093583 YP_002360761.1 CDS Msil_0425 NC_011666.1 466620 468716 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(466620..468716) Methylocella silvestris BL2 7093584 YP_002360762.1 CDS Msil_0426 NC_011666.1 468925 469968 R PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mrd:Mrad2831_5128 glutamate--ammonia ligase; glutamate--ammonia ligase complement(468925..469968) Methylocella silvestris BL2 7093585 YP_002360763.1 CDS Msil_0427 NC_011666.1 470504 471913 R TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: bid:Bind_1216 glutamine synthetase, type I; glutamine synthetase, type I complement(470504..471913) Methylocella silvestris BL2 7093586 YP_002360764.1 CDS Msil_0428 NC_011666.1 472003 472341 R PFAM: nitrogen regulatory protein P-II; KEGG: mes:Meso_1545 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(472003..472341) Methylocella silvestris BL2 7093587 YP_002360765.1 CDS Msil_0429 NC_011666.1 472727 473113 R KEGG: bid:Bind_1218 hypothetical protein; hypothetical protein complement(472727..473113) Methylocella silvestris BL2 7093588 YP_002360766.1 CDS Msil_0430 NC_011666.1 473478 474338 R PFAM: Rhodanese domain protein; KEGG: bid:Bind_1219 rhodanese domain protein; rhodanese domain-containing protein complement(473478..474338) Methylocella silvestris BL2 7093589 YP_002360767.1 CDS Msil_0431 NC_011666.1 474655 474927 D KEGG: ddan:GF21016-PA.; hypothetical protein 474655..474927 Methylocella silvestris BL2 7093590 YP_002360768.1 CDS Msil_0432 NC_011666.1 474957 475703 R PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: mrd:Mrad2831_4968 peptidase S1 and S6 chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap complement(474957..475703) Methylocella silvestris BL2 7093591 YP_002360769.1 CDS Msil_0433 NC_011666.1 475738 476061 D KEGG: bid:Bind_2227 hypothetical protein; hypothetical protein 475738..476061 Methylocella silvestris BL2 7093592 YP_002360770.1 CDS Msil_0434 NC_011666.1 476151 476861 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpt:Rpal_2126 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 476151..476861 Methylocella silvestris BL2 7093593 YP_002360771.1 CDS Msil_0435 NC_011666.1 476861 478306 D PFAM: ATP-binding region ATPase domain protein; KEGG: bid:Bind_2229 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 476861..478306 Methylocella silvestris BL2 7093594 YP_002360772.1 CDS Msil_0436 NC_011666.1 478354 479472 D TIGRFAM: cytochrome c-type biogenesis protein CcmI; KEGG: bid:Bind_2230 cytochrome c-type biogenesis protein CcmI; cytochrome c-type biogenesis protein CcmI 478354..479472 Methylocella silvestris BL2 7093595 YP_002360773.1 CDS Msil_0437 NC_011666.1 479482 479982 D PFAM: CcmE/CycJ protein; KEGG: bid:Bind_2231 CcmE/CycJ protein; CcmE/CycJ protein 479482..479982 Methylocella silvestris BL2 7093596 YP_002360774.1 CDS Msil_0438 NC_011666.1 479997 481979 D PFAM: cytochrome c assembly protein; KEGG: bid:Bind_2232 cytochrome c-type biogenesis protein CcmF; cytochrome c assembly protein 479997..481979 Methylocella silvestris BL2 7093597 YP_002360775.1 CDS Msil_0439 NC_011666.1 481982 482458 D PFAM: cytochrome C biogenesis protein; KEGG: bme:BMEI1331 cytochrome c-type biogenesis protein CycL precursor; cytochrome C biogenesis protein 481982..482458 Methylocella silvestris BL2 7093598 YP_002360776.1 CDS Msil_0440 NC_011666.1 482449 483138 R KEGG: bid:Bind_1950 leucyltransferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase complement(482449..483138) Methylocella silvestris BL2 7093599 YP_002360777.1 CDS Msil_0441 NC_011666.1 483322 483855 D KEGG: bid:Bind_2279 hypothetical protein; hypothetical protein 483322..483855 Methylocella silvestris BL2 7093600 YP_002360778.1 CDS Msil_0442 NC_011666.1 483922 484824 R PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: bid:Bind_2264 protein of unknown function zinc metallopeptidase putative; hypothetical protein complement(483922..484824) Methylocella silvestris BL2 7093601 YP_002360779.1 CDS Msil_0443 NC_011666.1 484930 485775 R TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: bid:Bind_2028 phage SPO1 DNA polymerase-related protein; phage SPO1 DNA polymerase-like protein complement(484930..485775) Methylocella silvestris BL2 7093602 YP_002360780.1 CDS Msil_0444 NC_011666.1 485974 487647 D PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: bid:Bind_3268 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 485974..487647 Methylocella silvestris BL2 7093522 YP_002360781.1 CDS Msil_0445 NC_011666.1 487653 488639 R TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: bid:Bind_2023 SUA5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein complement(487653..488639) Methylocella silvestris BL2 7091174 YP_002360782.1 CDS Msil_0446 NC_011666.1 488636 489043 R PFAM: helix-turn-helix HxlR type; KEGG: mpo:Mpop_1997 transcriptional regulator, HxlR family; HxlR family transcriptional regulator complement(488636..489043) Methylocella silvestris BL2 7091177 YP_002360783.1 CDS Msil_0447 NC_011666.1 489124 489738 D PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: mpo:Mpop_1996 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) 489124..489738 Methylocella silvestris BL2 7091178 YP_002360784.1 CDS Msil_0448 NC_011666.1 489749 490741 R KEGG: bid:Bind_1816 hypothetical protein; hypothetical protein complement(489749..490741) Methylocella silvestris BL2 7091179 YP_002360785.1 CDS Msil_0449 NC_011666.1 490749 493220 R KEGG: bid:Bind_1817 hypothetical protein; hypothetical protein complement(490749..493220) Methylocella silvestris BL2 7091180 YP_002360786.1 CDS Msil_0450 NC_011666.1 493533 494096 D PFAM: nitroreductase; KEGG: bid:Bind_1818 nitroreductase; nitroreductase 493533..494096 Methylocella silvestris BL2 7091181 YP_002360787.1 CDS Msil_0451 NC_011666.1 494127 494852 D KEGG: bid:Bind_1332 anti-ECFsigma factor, ChrR; anti-ECFsigma factor ChrR 494127..494852 Methylocella silvestris BL2 7091182 YP_002360788.1 CDS Msil_0452 NC_011666.1 494853 497414 R PFAM: MscS Mechanosensitive ion channel; KEGG: bid:Bind_3222 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS complement(494853..497414) Methylocella silvestris BL2 7091183 YP_002360789.1 CDS Msil_0453 NC_011666.1 497546 498637 R KEGG: sme:SMc00355 hypothetical protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein complement(497546..498637) Methylocella silvestris BL2 7091184 YP_002360790.1 CDS Msil_0454 NC_011666.1 498634 499689 R PFAM: tRNA synthetase class II (D K and N); KEGG: cak:Caul_0762 lysine--tRNA ligase; lysine--tRNA ligase complement(498634..499689) Methylocella silvestris BL2 7091185 YP_002360791.1 CDS Msil_0455 NC_011666.1 499902 500471 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 499902..500471 Methylocella silvestris BL2 7091186 YP_002360792.1 CDS Msil_0456 NC_011666.1 500556 500771 R hypothetical protein complement(500556..500771) Methylocella silvestris BL2 7091187 YP_002360793.1 CDS Msil_0457 NC_011666.1 501243 502508 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bcm:Bcenmc03_6887 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 501243..502508 Methylocella silvestris BL2 7091188 YP_002360794.1 CDS Msil_0458 NC_011666.1 502628 503881 R KEGG: mar:MAE_10840 hypothetical protein; hypothetical protein complement(502628..503881) Methylocella silvestris BL2 7091189 YP_002360795.1 CDS Msil_0459 NC_011666.1 504128 505519 R KEGG: cms:CMS_1585 putative polysaccharide polymerase; hypothetical protein complement(504128..505519) Methylocella silvestris BL2 7091190 YP_002360796.1 CDS Msil_0460 NC_011666.1 506695 508593 D KEGG: kra:Krad_1831 hypothetical protein; hypothetical protein 506695..508593 Methylocella silvestris BL2 7091191 YP_002360797.1 CDS Msil_0461 NC_011666.1 509149 510672 R PFAM: fumarate lyase; delta crystallin domain protein; KEGG: mpo:Mpop_4435 fumarate lyase; fumarate lyase complement(509149..510672) Methylocella silvestris BL2 7091192 YP_002360798.1 CDS Msil_0462 NC_011666.1 510917 513226 R PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: bid:Bind_2205 RNA binding S1 domain protein; RNA binding S1 domain-containing protein complement(510917..513226) Methylocella silvestris BL2 7091193 YP_002360799.1 CDS Msil_0464 NC_011666.1 514987 515109 R hypothetical protein complement(514987..515109) Methylocella silvestris BL2 7091196 YP_002360800.1 CDS Msil_0465 NC_011666.1 515306 517582 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xau:Xaut_0422 TonB-dependent receptor; TonB-dependent receptor complement(515306..517582) Methylocella silvestris BL2 7091197 YP_002360801.1 CDS Msil_0466 NC_011666.1 517672 518037 R KEGG: xau:Xaut_0421 hypothetical protein; hypothetical protein complement(517672..518037) Methylocella silvestris BL2 7091198 YP_002360802.1 CDS Msil_0467 NC_011666.1 518179 519120 R PFAM: copper resistance D domain protein; KEGG: bbt:BBta_p0114 copper resistance protein D; copper resistance D domain-containing protein complement(518179..519120) Methylocella silvestris BL2 7091199 YP_002360803.1 CDS Msil_0468 NC_011666.1 519149 519529 R PFAM: copper resistance protein CopC; KEGG: bbt:BBta_p0115 copper resistance protein C; copper resistance protein CopC complement(519149..519529) Methylocella silvestris BL2 7091200 YP_002360804.1 CDS Msil_0469 NC_011666.1 519540 520517 R KEGG: nha:Nham_4399 hypothetical protein; hypothetical protein complement(519540..520517) Methylocella silvestris BL2 7091201 YP_002360805.1 CDS Msil_0470 NC_011666.1 520580 521080 R KEGG: azc:AZC_1257 hypothetical protein; hypothetical protein complement(520580..521080) Methylocella silvestris BL2 7091202 YP_002360806.1 CDS Msil_0471 NC_011666.1 522216 524093 D TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: mex:Mext_4150 PQQ-dependent dehydrogenase, methanol/ethanol family; PQQ-dependent dehydrogenase 522216..524093 Methylocella silvestris BL2 7091203 YP_002360807.1 CDS Msil_0472 NC_011666.1 524235 525092 D SMART: extracellular solute-binding protein family 3; KEGG: mrd:Mrad2831_4209 extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 524235..525092 Methylocella silvestris BL2 7091204 YP_002360808.1 CDS Msil_0473 NC_011666.1 525148 525756 D PFAM: cytochrome c class I; KEGG: mex:Mext_4148 cytochrome c class I; cytochrome c class I 525148..525756 Methylocella silvestris BL2 7091205 YP_002360809.1 CDS Msil_0474 NC_011666.1 525825 526130 D PFAM: methanol dehydrogenase beta subunit; KEGG: rpe:RPE_3136 methanol dehydrogenase, beta subunit; methanol dehydrogenase beta subunit 525825..526130 Methylocella silvestris BL2 7091206 YP_002360810.1 CDS Msil_0475 NC_011666.1 526252 527289 D PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rpe:RPE_3135 ATPase associated with various cellular activities, AAA_3; ATPase 526252..527289 Methylocella silvestris BL2 7091207 YP_002360811.1 CDS Msil_0476 NC_011666.1 527315 528163 D KEGG: mex:Mext_4145 hypothetical protein; hypothetical protein 527315..528163 Methylocella silvestris BL2 7091208 YP_002360812.1 CDS Msil_0477 NC_011666.1 528169 529074 D KEGG: mex:Mext_4144 MxaA protein, putative; MxaA protein 528169..529074 Methylocella silvestris BL2 7091209 YP_002360813.1 CDS Msil_0478 NC_011666.1 529071 530111 D SMART: von Willebrand factor type A; KEGG: mrd:Mrad2831_4203 von Willebrand factor type A; von Willebrand factor type A 529071..530111 Methylocella silvestris BL2 7091210 YP_002360814.1 CDS Msil_0479 NC_011666.1 530108 530698 D KEGG: mrd:Mrad2831_4202 hypothetical protein; hypothetical protein 530108..530698 Methylocella silvestris BL2 7091211 YP_002360815.1 CDS Msil_0480 NC_011666.1 530695 531723 D SMART: von Willebrand factor type A; KEGG: mpo:Mpop_4623 von Willebrand factor type A; von Willebrand factor type A 530695..531723 Methylocella silvestris BL2 7091212 YP_002360816.1 CDS Msil_0481 NC_011666.1 531720 532250 D KEGG: mrd:Mrad2831_4200 MxaD protein, putative; MxaD protein 531720..532250 Methylocella silvestris BL2 7091213 YP_002360817.1 CDS Msil_0482 NC_011666.1 532260 533240 D TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mrd:Mrad2831_4199 40-residue YVTN family beta-propeller repeat protein; 40-residue YVTN family beta-propeller repeat-containing protein 532260..533240 Methylocella silvestris BL2 7091214 YP_002360818.1 CDS Msil_0483 NC_011666.1 533280 533807 D KEGG: mex:Mext_4138 hypothetical protein; hypothetical protein 533280..533807 Methylocella silvestris BL2 7091215 YP_002360819.1 CDS Msil_0484 NC_011666.1 533850 535271 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mrd:Mrad2831_3394 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 533850..535271 Methylocella silvestris BL2 7091216 YP_002360820.1 CDS Msil_0485 NC_011666.1 535342 535968 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpo:Mpop_4619 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 535342..535968 Methylocella silvestris BL2 7091217 YP_002360821.1 CDS Msil_0486 NC_011666.1 536234 538450 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_2207 diguanylate cyclase (GGDEF domain); diguanylate cyclase 536234..538450 Methylocella silvestris BL2 7091218 YP_002360822.1 CDS Msil_0488 NC_011666.1 539463 541787 R TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; KEGG: scl:sce4643 probable cysteine desulfurase; SufS subfamily cysteine desulfurase complement(539463..541787) Methylocella silvestris BL2 7091220 YP_002360823.1 CDS Msil_0489 NC_011666.1 541774 542700 R KEGG: rpe:RPE_3187 hypothetical protein; hypothetical protein complement(541774..542700) Methylocella silvestris BL2 7091221 YP_002360824.1 CDS Msil_0490 NC_011666.1 543248 544315 R PFAM: NMT1/THI5 like domain protein; KEGG: bja:bll2634 hypothetical protein; NMT1/THI5 like domain-containing protein complement(543248..544315) Methylocella silvestris BL2 7091223 YP_002360825.1 CDS Msil_0491 NC_011666.1 544416 545654 R KEGG: nfa:nfa29350 hypothetical protein; hypothetical protein complement(544416..545654) Methylocella silvestris BL2 7091224 YP_002360826.1 CDS Msil_0492 NC_011666.1 545958 547841 R KEGG: bid:Bind_2713 hypothetical protein; hypothetical protein complement(545958..547841) Methylocella silvestris BL2 7091225 YP_002360827.1 CDS Msil_0493 NC_011666.1 548295 548639 R TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: bid:Bind_2712 iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly accessory protein complement(548295..548639) Methylocella silvestris BL2 7091226 YP_002360828.1 CDS Msil_0494 NC_011666.1 548768 549985 D KEGG: bid:Bind_2711 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; deoxyguanosinetriphosphate triphosphohydrolase 548768..549985 Methylocella silvestris BL2 7091227 YP_002360829.1 CDS Msil_0495 NC_011666.1 550181 551977 D KEGG: bid:Bind_2710 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase 550181..551977 Methylocella silvestris BL2 7091228 YP_002360830.1 CDS Msil_0496 NC_011666.1 552265 553641 D PFAM: Sporulation domain protein; KEGG: bid:Bind_2709 sporulation domain protein; sporulation domain-containing protein 552265..553641 Methylocella silvestris BL2 7091229 YP_002360831.1 CDS Msil_0497 NC_011666.1 553788 554582 D PFAM: chromosome segregation and condensation protein ScpA; KEGG: bid:Bind_2708 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA 553788..554582 Methylocella silvestris BL2 7091230 YP_002360832.1 CDS Msil_0498 NC_011666.1 554579 555343 D TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: rpe:RPE_2695 putative transcriptional regulator; chromosome segregation and condensation protein ScpB 554579..555343 Methylocella silvestris BL2 7091231 YP_002360833.1 CDS Msil_0499 NC_011666.1 555355 556386 R PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bid:Bind_1220 pyridoxal-5'-phosphate-dependent protein beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta complement(555355..556386) Methylocella silvestris BL2 7091232 YP_002360834.1 CDS Msil_0500 NC_011666.1 556579 557280 R TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: mex:Mext_0324 MIP family channel protein; MIP family channel protein complement(556579..557280) Methylocella silvestris BL2 7091233 YP_002360835.1 CDS Msil_0501 NC_011666.1 557700 558932 R TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: bid:Bind_1418 molybdenum cofactor synthesis domain protein; molybdenum cofactor synthesis domain-containing protein complement(557700..558932) Methylocella silvestris BL2 7091234 YP_002360836.1 CDS Msil_0502 NC_011666.1 558935 559462 R TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: bid:Bind_1417 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C complement(558935..559462) Methylocella silvestris BL2 7091235 YP_002360837.1 CDS Msil_0503 NC_011666.1 559459 560289 R PFAM: Indole-3-glycerol phosphate synthase; KEGG: bid:Bind_1416 indole-3-glycerol-phosphate synthase; indole-3-glycerol-phosphate synthase complement(559459..560289) Methylocella silvestris BL2 7091236 YP_002360838.1 CDS trpD NC_011666.1 560286 561335 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(560286..561335) Methylocella silvestris BL2 7091237 YP_002360839.1 CDS Msil_0505 NC_011666.1 561346 561951 R TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: bid:Bind_1445 glutamine amidotransferase of anthranilate synthase; glutamine amidotransferase of anthranilate synthase complement(561346..561951) Methylocella silvestris BL2 7091238 YP_002360840.1 CDS Msil_0506 NC_011666.1 562053 563570 R TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: bid:Bind_1448 anthranilate synthase component I; anthranilate synthase component I complement(562053..563570) Methylocella silvestris BL2 7091239 YP_002360841.1 CDS Msil_0507 NC_011666.1 563581 565491 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bid:Bind_1449 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(563581..565491) Methylocella silvestris BL2 7091240 YP_002360842.1 CDS Msil_0508 NC_011666.1 565633 566424 D PFAM: triosephosphate isomerase; KEGG: nwi:Nwi_1835 triosephosphate isomerase; Triose-phosphate isomerase 565633..566424 Methylocella silvestris BL2 7091241 YP_002360843.1 CDS Msil_0509 NC_011666.1 566643 567014 D TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: bid:Bind_1451 preprotein translocase, SecG subunit; preprotein translocase subunit SecG 566643..567014 Methylocella silvestris BL2 7091242 YP_002360844.1 CDS pyrG NC_011666.1 567153 568781 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 567153..568781 Methylocella silvestris BL2 7091243 YP_002360845.1 CDS Msil_0511 NC_011666.1 568839 569909 D PFAM: aldo/keto reductase; KEGG: bid:Bind_3664 aldo/keto reductase; aldo/keto reductase 568839..569909 Methylocella silvestris BL2 7091244 YP_002360846.1 CDS Msil_0512 NC_011666.1 569915 570376 R NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(569915..570376) Methylocella silvestris BL2 7091245 YP_002360847.1 CDS Msil_0513 NC_011666.1 570576 571157 D PFAM: regulatory protein TetR; KEGG: bid:Bind_1464 transcriptional regulator, TetR family; TetR family transcriptional regulator 570576..571157 Methylocella silvestris BL2 7091246 YP_002360848.1 CDS Msil_0514 NC_011666.1 571185 571949 R PFAM: Lytic transglycosylase catalytic; KEGG: bid:Bind_1465 lytic transglycosylase catalytic; lytic transglycosylase complement(571185..571949) Methylocella silvestris BL2 7091247 YP_002360849.1 CDS eno NC_011666.1 572296 573579 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 572296..573579 Methylocella silvestris BL2 7091248 YP_002360850.1 CDS Msil_0516 NC_011666.1 573693 574928 D PFAM: major facilitator superfamily MFS_1; KEGG: bra:BRADO3241 major facilitator transporter; major facilitator superfamily protein 573693..574928 Methylocella silvestris BL2 7091249 YP_002360851.1 CDS Msil_0517 NC_011666.1 574925 576184 D PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: mlo:mlr8128 hypothetical protein; citrate transporter 574925..576184 Methylocella silvestris BL2 7091250 YP_002360852.1 CDS Msil_0518 NC_011666.1 576218 576541 D KEGG: bid:Bind_1504 septum formation initiator; septum formation initiator 576218..576541 Methylocella silvestris BL2 7091251 YP_002360853.1 CDS Msil_0519 NC_011666.1 576716 577750 D KEGG: bid:Bind_1505 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component; pyruvate dehydrogenase E1 component subunit alpha 576716..577750 Methylocella silvestris BL2 7091252 YP_002360854.1 CDS Msil_0520 NC_011666.1 577804 579186 D catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 577804..579186 Methylocella silvestris BL2 7091253 YP_002360855.1 CDS Msil_0521 NC_011666.1 579286 580620 D KEGG: bid:Bind_1507 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 579286..580620 Methylocella silvestris BL2 7091254 YP_002360856.1 CDS Msil_0522 NC_011666.1 580645 582087 D E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 580645..582087 Methylocella silvestris BL2 7091255 YP_002360857.1 CDS Msil_0523 NC_011666.1 582182 583159 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 582182..583159 Methylocella silvestris BL2 7091256 YP_002360858.1 CDS Msil_0524 NC_011666.1 583254 583712 D PFAM: cyclase/dehydrase; KEGG: bid:Bind_1512 cyclase/dehydrase; cyclase/dehydrase 583254..583712 Methylocella silvestris BL2 7091257 YP_002360859.1 CDS Msil_0525 NC_011666.1 583720 584211 R PFAM: CinA domain protein; KEGG: bid:Bind_1514 CinA domain protein; CinA domain-containing protein complement(583720..584211) Methylocella silvestris BL2 7092866 YP_002360860.1 CDS Msil_0526 NC_011666.1 584211 585425 R TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MECDP-synthase; KEGG: bid:Bind_1516 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(584211..585425) Methylocella silvestris BL2 7091587 YP_002360861.1 CDS Msil_0527 NC_011666.1 585601 586584 D TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: bid:Bind_1517 TIM-barrel protein, nifR3 family; nifR3 family TIM-barrel protein 585601..586584 Methylocella silvestris BL2 7091588 YP_002360862.1 CDS Msil_0528 NC_011666.1 586584 587729 D KEGG: bid:Bind_1518 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; signal transduction histidine kinase, nitrogen specific, NtrB 586584..587729 Methylocella silvestris BL2 7091589 YP_002360863.1 CDS Msil_0529 NC_011666.1 587835 589310 D KEGG: bid:Bind_1519 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; nitrogen metabolism transcriptional regulator NtrC 587835..589310 Methylocella silvestris BL2 7091590 YP_002360864.1 CDS Msil_0530 NC_011666.1 589478 591745 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: bid:Bind_1520 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 589478..591745 Methylocella silvestris BL2 7091591 YP_002360865.1 CDS Msil_0531 NC_011666.1 591756 593123 D PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bid:Bind_1521 two component, sigma54 specific, transcriptional regulator, fis family; Fis family two component sigma-54 specific transcriptional regulator 591756..593123 Methylocella silvestris BL2 7091592 YP_002360866.1 CDS Msil_0532 NC_011666.1 593133 593720 D PFAM: Chromate transporter; KEGG: bid:Bind_1522 chromate transporter; chromate transporter 593133..593720 Methylocella silvestris BL2 7091593 YP_002360867.1 CDS Msil_0533 NC_011666.1 593717 594256 D PFAM: Chromate transporter; KEGG: rpt:Rpal_4011 chromate transporter; chromate transporter 593717..594256 Methylocella silvestris BL2 7091594 YP_002360868.1 CDS Msil_0534 NC_011666.1 594273 595133 D PFAM: aminotransferase class IV; KEGG: bid:Bind_1524 aminotransferase class IV; class IV aminotransferase 594273..595133 Methylocella silvestris BL2 7091595 YP_002360869.1 CDS Msil_0535 NC_011666.1 595349 595600 D TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: bid:Bind_1525 RNA chaperone Hfq; RNA chaperone Hfq 595349..595600 Methylocella silvestris BL2 7091596 YP_002360870.1 CDS Msil_0536 NC_011666.1 595712 597121 D TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: bid:Bind_1526 GTP-binding proten HflX; GTP-binding proten HflX 595712..597121 Methylocella silvestris BL2 7091597 YP_002360871.1 CDS Msil_0537 NC_011666.1 597094 597966 R TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: bid:Bind_1527 MazG family protein; MazG family protein complement(597094..597966) Methylocella silvestris BL2 7091598 YP_002360872.1 CDS Msil_0538 NC_011666.1 598069 598722 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bid:Bind_1528 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein complement(598069..598722) Methylocella silvestris BL2 7091599 YP_002360873.1 CDS Msil_0539 NC_011666.1 599094 599891 R PFAM: beta-lactamase domain protein; KEGG: bid:Bind_1532 metal-dependent hydrolase; beta-lactamase domain-containing protein complement(599094..599891) Methylocella silvestris BL2 7091600 YP_002360874.1 CDS Msil_0540 NC_011666.1 599888 600691 R TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; amidohydrolase 2; KEGG: bid:Bind_1533 hydrolase, TatD family; TatD family hydrolase complement(599888..600691) Methylocella silvestris BL2 7091601 YP_002360875.1 CDS Msil_0541 NC_011666.1 600711 602270 R TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); KEGG: bid:Bind_1534 methionyl-tRNA synthetase; methionyl-tRNA synthetase complement(600711..602270) Methylocella silvestris BL2 7091602 YP_002360876.1 CDS Msil_0542 NC_011666.1 602365 603459 R SMART: AAA ATPase; KEGG: bid:Bind_1535 putative DNA polymerase III delta prime subunit; ATPase AAA complement(602365..603459) Methylocella silvestris BL2 7091603 YP_002360877.1 CDS Msil_0543 NC_011666.1 603449 604150 R PFAM: thymidylate kinase; KEGG: bja:bll4518 thymydilate kinase; dTMP kinase complement(603449..604150) Methylocella silvestris BL2 7091604 YP_002360878.1 CDS Msil_0544 NC_011666.1 604134 605357 R PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: bid:Bind_1537 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase complement(604134..605357) Methylocella silvestris BL2 7091605 YP_002360879.1 CDS Msil_0545 NC_011666.1 605507 606532 R TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: bid:Bind_1538 rare lipoprotein A; rare lipoprotein A complement(605507..606532) Methylocella silvestris BL2 7091606 YP_002360880.1 CDS Msil_0546 NC_011666.1 606901 607326 R TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: cak:Caul_4758 DNA mismatch endonuclease Vsr; DNA mismatch endonuclease Vsr complement(606901..607326) Methylocella silvestris BL2 7091607 YP_002360881.1 CDS Msil_0547 NC_011666.1 607323 608474 R TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: tbd:Tbd_1810 C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase complement(607323..608474) Methylocella silvestris BL2 7091608 YP_002360882.1 CDS Msil_0548 NC_011666.1 608687 608992 R PFAM: ETC complex I subunit conserved region; KEGG: bid:Bind_1550 ETC complex I subunit conserved region; ETC complex I subunit complement(608687..608992) Methylocella silvestris BL2 7091610 YP_002360883.1 CDS Msil_0549 NC_011666.1 609427 609942 D KEGG: fal:FRAAL2167 conserved hypothetical protein; putative signal peptide; hypothetical protein 609427..609942 Methylocella silvestris BL2 7091612 YP_002360884.1 CDS Msil_0550 NC_011666.1 609949 610458 R PFAM: protein of unknown function DUF192; KEGG: bid:Bind_1551 protein of unknown function DUF192; hypothetical protein complement(609949..610458) Methylocella silvestris BL2 7091613 YP_002360885.1 CDS Msil_0551 NC_011666.1 610550 611119 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mrd:Mrad2831_2736 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein complement(610550..611119) Methylocella silvestris BL2 7091614 YP_002360886.1 CDS Msil_0552 NC_011666.1 611264 612019 R PFAM: Silent information regulator protein Sir2; KEGG: bid:Bind_1553 silent information regulator protein Sir2; silent information regulator protein Sir2 complement(611264..612019) Methylocella silvestris BL2 7091615 YP_002360887.1 CDS Msil_0553 NC_011666.1 612187 613362 D KEGG: bid:Bind_1555 hypothetical protein; hypothetical protein 612187..613362 Methylocella silvestris BL2 7091616 YP_002360888.1 CDS Msil_0554 NC_011666.1 613672 614781 D KEGG: bid:Bind_1555 hypothetical protein; hypothetical protein 613672..614781 Methylocella silvestris BL2 7091617 YP_002360889.1 CDS Msil_0555 NC_011666.1 614831 616672 R PFAM: Carbamoyltransferase; KEGG: bid:Bind_1557 carbamoyltransferase; carbamoyltransferase complement(614831..616672) Methylocella silvestris BL2 7091618 YP_002360890.1 CDS Msil_0556 NC_011666.1 616679 616828 R KEGG: bid:Bind_1558 hypothetical protein; hypothetical protein complement(616679..616828) Methylocella silvestris BL2 7091619 YP_002360891.1 CDS Msil_0557 NC_011666.1 616838 617269 R KEGG: bid:Bind_1559 hypothetical protein; hypothetical protein complement(616838..617269) Methylocella silvestris BL2 7091620 YP_002360892.1 CDS Msil_0558 NC_011666.1 617760 618209 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: bid:Bind_1376 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 617760..618209 Methylocella silvestris BL2 7091621 YP_002360893.1 CDS adk NC_011666.1 618279 618860 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(618279..618860) Methylocella silvestris BL2 7091622 YP_002360894.1 CDS Msil_0560 NC_011666.1 618857 620185 R TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: bid:Bind_1374 preprotein translocase, SecY subunit; preprotein translocase subunit SecY complement(618857..620185) Methylocella silvestris BL2 7091623 YP_002360895.1 CDS rplO NC_011666.1 620495 620989 R late assembly protein; 50S ribosomal protein L15 complement(620495..620989) Methylocella silvestris BL2 7091624 YP_002360896.1 CDS rpmD NC_011666.1 621015 621212 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(621015..621212) Methylocella silvestris BL2 7091625 YP_002360897.1 CDS rpsE NC_011666.1 621223 621792 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(621223..621792) Methylocella silvestris BL2 7091626 YP_002360898.1 CDS rplR NC_011666.1 621873 622235 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(621873..622235) Methylocella silvestris BL2 7091627 YP_002360899.1 CDS rplF NC_011666.1 622259 622792 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(622259..622792) Methylocella silvestris BL2 7091628 YP_002360900.1 CDS rpsH NC_011666.1 622818 623216 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(622818..623216) Methylocella silvestris BL2 7091629 YP_002360901.1 CDS rpsN NC_011666.1 623227 623532 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(623227..623532) Methylocella silvestris BL2 7091630 YP_002360902.1 CDS Msil_0568 NC_011666.1 623574 624305 R PFAM: ribosomal protein L5; KEGG: bid:Bind_1366 ribosomal protein L5; 50S ribosomal protein L5 complement(623574..624305) Methylocella silvestris BL2 7091631 YP_002360903.1 CDS Msil_0569 NC_011666.1 624298 624615 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(624298..624615) Methylocella silvestris BL2 7091632 YP_002360904.1 CDS rplN NC_011666.1 624615 624983 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(624615..624983) Methylocella silvestris BL2 7091633 YP_002360905.1 CDS rpsQ NC_011666.1 625083 625328 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(625083..625328) Methylocella silvestris BL2 7091634 YP_002360906.1 CDS Msil_0572 NC_011666.1 625377 625589 R PFAM: ribosomal protein L29; KEGG: bid:Bind_1362 ribosomal protein L29; 50S ribosomal protein L29 complement(625377..625589) Methylocella silvestris BL2 7091635 YP_002360907.1 CDS rplP NC_011666.1 625601 626014 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(625601..626014) Methylocella silvestris BL2 7091636 YP_002360908.1 CDS Msil_0574 NC_011666.1 626044 626763 R KEGG: bid:Bind_1360 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein; 30S ribosomal protein S3 complement(626044..626763) Methylocella silvestris BL2 7091637 YP_002360909.1 CDS rplV NC_011666.1 626773 627159 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(626773..627159) Methylocella silvestris BL2 7091638 YP_002360910.1 CDS rpsS NC_011666.1 627162 627440 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(627162..627440) Methylocella silvestris BL2 7091639 YP_002360911.1 CDS rplB NC_011666.1 627443 628282 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(627443..628282) Methylocella silvestris BL2 7091640 YP_002360912.1 CDS Msil_0578 NC_011666.1 628309 628617 R PFAM: Ribosomal protein L25/L23; KEGG: bid:Bind_1356 ribosomal protein L25/L23; 50S ribosomal protein L25 complement(628309..628617) Methylocella silvestris BL2 7091641 YP_002360913.1 CDS rplD NC_011666.1 628614 629234 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(628614..629234) Methylocella silvestris BL2 7091642 YP_002360914.1 CDS rplC NC_011666.1 629231 629968 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(629231..629968) Methylocella silvestris BL2 7091643 YP_002360915.1 CDS rpsJ NC_011666.1 630061 630369 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(630061..630369) Methylocella silvestris BL2 7091644 YP_002360916.1 CDS Msil_0582 NC_011666.1 630501 631691 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(630501..631691) Methylocella silvestris BL2 7091645 YP_002360917.1 CDS Msil_0583 NC_011666.1 631732 633807 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(631732..633807) Methylocella silvestris BL2 7091646 YP_002360918.1 CDS Msil_0584 NC_011666.1 633840 634310 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(633840..634310) Methylocella silvestris BL2 7091647 YP_002360919.1 CDS rpsL NC_011666.1 634380 634751 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(634380..634751) Methylocella silvestris BL2 7091648 YP_002360920.1 CDS Msil_0586 NC_011666.1 635121 636506 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(635121..636506) Methylocella silvestris BL2 7091649 YP_002360921.1 CDS Msil_0587 NC_011666.1 636700 637488 R TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: bid:Bind_2703 sec-independent protein translocase, TatC subunit; Sec-independent protein translocase subunit TatC complement(636700..637488) Methylocella silvestris BL2 7091650 YP_002360922.1 CDS Msil_0588 NC_011666.1 637567 638193 R TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: bid:Bind_2704 twin-arginine translocation protein, TatB subunit; twin-arginine translocation protein subunit TatB complement(637567..638193) Methylocella silvestris BL2 7091651 YP_002360923.1 CDS tatA NC_011666.1 638312 638560 R TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A complement(638312..638560) Methylocella silvestris BL2 7091652 YP_002360924.1 CDS Msil_0590 NC_011666.1 638728 639150 D PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: xau:Xaut_2944 protein of unknown function DUF306 MetA and HslJ; hypothetical protein 638728..639150 Methylocella silvestris BL2 7091653 YP_002360925.1 CDS Msil_0591 NC_011666.1 639156 640259 R PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: mlo:mlr9681 sensory transduction histidine kinase; signal transduction histidine kinase complement(639156..640259) Methylocella silvestris BL2 7091654 YP_002360926.1 CDS Msil_0592 NC_011666.1 640440 641228 D TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aeh:Mlg_2555 HAD family hydrolase; HAD-superfamily hydrolase 640440..641228 Methylocella silvestris BL2 7091655 YP_002360927.1 CDS Msil_0593 NC_011666.1 641259 641759 D hypothetical protein 641259..641759 Methylocella silvestris BL2 7091656 YP_002360928.1 CDS Msil_0594 NC_011666.1 641899 643005 D KEGG: aor:AO090011000131 hypothetical protein; hypothetical protein 641899..643005 Methylocella silvestris BL2 7091657 YP_002360929.1 CDS Msil_0595 NC_011666.1 643059 645431 R PFAM: UvrD/REP helicase; KEGG: bid:Bind_0787 UvrD/REP helicase; UvrD/REP helicase complement(643059..645431) Methylocella silvestris BL2 7091658 YP_002360930.1 CDS Msil_0596 NC_011666.1 645621 649181 D PFAM: AsmA family protein; KEGG: mex:Mext_0320 hypothetical protein; AsmA family protein 645621..649181 Methylocella silvestris BL2 7091659 YP_002360931.1 CDS Msil_0597 NC_011666.1 649189 649449 R KEGG: bid:Bind_0773 hypothetical protein; siderophore biosynthesis protein-like protein complement(649189..649449) Methylocella silvestris BL2 7091660 YP_002360932.1 CDS Msil_0598 NC_011666.1 649446 649730 R KEGG: bja:bsr6520 hypothetical protein; hypothetical protein complement(649446..649730) Methylocella silvestris BL2 7091661 YP_002360933.1 CDS Msil_0599 NC_011666.1 649730 650272 R PFAM: protein of unknown function DUF1321; KEGG: bid:Bind_0771 protein of unknown function DUF1321; hypothetical protein complement(649730..650272) Methylocella silvestris BL2 7091662 YP_002360934.1 CDS Msil_0600 NC_011666.1 650969 651778 D PFAM: thymidylate synthase; KEGG: mpo:Mpop_2782 thymidylate synthase; Thymidylate synthase 650969..651778 Methylocella silvestris BL2 7091663 YP_002360935.1 CDS Msil_0601 NC_011666.1 651859 652776 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bid:Bind_1323 protein of unknown function DUF6 transmembrane; hypothetical protein 651859..652776 Methylocella silvestris BL2 7091664 YP_002360936.1 CDS Msil_0602 NC_011666.1 652781 653287 D PFAM: GCN5-related N-acetyltransferase; KEGG: bja:bll6511 acetyltransferase; N-acetyltransferase GCN5 652781..653287 Methylocella silvestris BL2 7091665 YP_002360937.1 CDS Msil_0603 NC_011666.1 653284 653808 D PFAM: dihydrofolate reductase region; KEGG: bid:Bind_1729 dihydrofolate reductase; Dihydrofolate reductase 653284..653808 Methylocella silvestris BL2 7091666 YP_002360938.1 CDS Msil_0604 NC_011666.1 653920 655026 D TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: bid:Bind_1730 HflK protein; HflK protein 653920..655026 Methylocella silvestris BL2 7091667 YP_002360939.1 CDS Msil_0605 NC_011666.1 655023 655961 D TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: bid:Bind_1731 HflC protein; HflC protein 655023..655961 Methylocella silvestris BL2 7093520 YP_002360940.1 CDS Msil_0606 NC_011666.1 656365 657936 D KEGG: bid:Bind_1733 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 656365..657936 Methylocella silvestris BL2 7093684 YP_002360941.1 CDS Msil_0607 NC_011666.1 658212 658424 D hypothetical protein 658212..658424 Methylocella silvestris BL2 7093686 YP_002360942.1 CDS Msil_0608 NC_011666.1 658521 658745 D hypothetical protein 658521..658745 Methylocella silvestris BL2 7093687 YP_002360943.1 CDS Msil_0609 NC_011666.1 658863 659069 D PFAM: TOBE domain protein; KEGG: rpb:RPB_0855 molybdenum-pterin binding protein; TOBE domain-containing protein 658863..659069 Methylocella silvestris BL2 7093688 YP_002360944.1 CDS Msil_0610 NC_011666.1 659373 659624 R KEGG: pfl:PFL_2569 hypothetical protein; hypothetical protein complement(659373..659624) Methylocella silvestris BL2 7093689 YP_002360945.1 CDS Msil_0611 NC_011666.1 659819 662425 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: sat:SYN_02760 Mg(2+) transport ATPase, P-type; magnesium-translocating P-type ATPase complement(659819..662425) Methylocella silvestris BL2 7093690 YP_002360946.1 CDS Msil_0612 NC_011666.1 662612 663601 D TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rru:Rru_A2962 zinc-containing alcohol dehydrogenase superfamily protein; YhdH/YhfP family quinone oxidoreductase 662612..663601 Methylocella silvestris BL2 7093691 YP_002360947.1 CDS Msil_0613 NC_011666.1 663624 665111 R TIGRFAM: TonB family protein; protein TolA; PFAM: Gram-negative tonB protein; Tol-Pal system TolA; KEGG: bid:Bind_2937 TonB family protein; TonB family protein complement(663624..665111) Methylocella silvestris BL2 7093692 YP_002360948.1 CDS Msil_0614 NC_011666.1 665346 665996 R KEGG: bid:Bind_2938 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase complement(665346..665996) Methylocella silvestris BL2 7093693 YP_002360949.1 CDS Msil_0615 NC_011666.1 665993 667324 R KEGG: mrd:Mrad2831_5616 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase complement(665993..667324) Methylocella silvestris BL2 7093694 YP_002360950.1 CDS Msil_0616 NC_011666.1 667536 667892 D PFAM: conserved hypothetical protein; KEGG: bid:Bind_2939 hypothetical protein; hypothetical protein 667536..667892 Methylocella silvestris BL2 7093695 YP_002360951.1 CDS Msil_0617 NC_011666.1 668297 669025 D PFAM: protein of unknown function UPF0153; KEGG: bid:Bind_1780 protein of unknown function UPF0153; hypothetical protein 668297..669025 Methylocella silvestris BL2 7093697 YP_002360952.1 CDS Msil_0618 NC_011666.1 669085 669990 R PFAM: ROK family protein; KEGG: pla:Plav_2811 ROK family protein; ROK family protein complement(669085..669990) Methylocella silvestris BL2 7093698 YP_002360953.1 CDS Msil_0619 NC_011666.1 670095 670637 R PFAM: Ferritin Dps family protein; KEGG: aba:Acid345_3717 ferritin and Dps; ferritin Dps family protein complement(670095..670637) Methylocella silvestris BL2 7093699 YP_002360954.1 CDS Msil_0620 NC_011666.1 670732 671595 R PFAM: protein of unknown function DUF533; KEGG: oan:Oant_2354 protein of unknown function DUF533; hypothetical protein complement(670732..671595) Methylocella silvestris BL2 7093700 YP_002360955.1 CDS Msil_0621 NC_011666.1 672040 672837 D KEGG: bid:Bind_1194 cytochrome c oxidase subunit I; cytochrome c oxidase subunit I 672040..672837 Methylocella silvestris BL2 7093701 YP_002360956.1 CDS Msil_0622 NC_011666.1 673021 673884 D KEGG: scl:sce6240 hypothetical protein; hypothetical protein 673021..673884 Methylocella silvestris BL2 7093702 YP_002360957.1 CDS Msil_0623 NC_011666.1 673948 675162 R TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: bid:Bind_1960 polyhydroxyalkanoate depolymerase, intracellular; polyhydroxyalkanoate depolymerase complement(673948..675162) Methylocella silvestris BL2 7093703 YP_002360958.1 CDS Msil_0624 NC_011666.1 675328 675981 D PFAM: Glutathione S-transferase domain; KEGG: bid:Bind_1959 glutathione S-transferase domain; glutathione S-transferase domain-containing protein 675328..675981 Methylocella silvestris BL2 7093704 YP_002360959.1 CDS Msil_0625 NC_011666.1 676518 676973 D KEGG: pnu:Pnuc_1216 cupin 2 domain-containing protein; cupin 676518..676973 Methylocella silvestris BL2 7093705 YP_002360960.1 CDS Msil_0626 NC_011666.1 677001 678344 R catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase complement(677001..678344) Methylocella silvestris BL2 7093706 YP_002360961.1 CDS Msil_0627 NC_011666.1 678384 679073 R PFAM: GCN5-related N-acetyltransferase; KEGG: nmu:Nmul_A1596 hypothetical protein; N-acetyltransferase GCN5 complement(678384..679073) Methylocella silvestris BL2 7093707 YP_002360962.1 CDS Msil_0628 NC_011666.1 679200 682361 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rle:RL4275 Acr/RND family efflux transmembrane transporter; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(679200..682361) Methylocella silvestris BL2 7093708 YP_002360963.1 CDS Msil_0629 NC_011666.1 682390 683634 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mca:MCA1361 HlyD family secretion protein; RND family efflux transporter MFP subunit complement(682390..683634) Methylocella silvestris BL2 7093709 YP_002360964.1 CDS Msil_0630 NC_011666.1 683661 685370 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gme:Gmet_1666 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein complement(683661..685370) Methylocella silvestris BL2 7093710 YP_002360965.1 CDS Msil_0631 NC_011666.1 685668 686840 D PFAM: Patatin; KEGG: bbt:BBta_1412 putative patatin-like phospholipase; patatin 685668..686840 Methylocella silvestris BL2 7093711 YP_002360966.1 CDS Msil_0632 NC_011666.1 687161 687904 D TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: bid:Bind_1704 septum site-determining protein MinC; septum site-determining protein MinC 687161..687904 Methylocella silvestris BL2 7093712 YP_002360967.1 CDS Msil_0633 NC_011666.1 688004 688819 D TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ret:RHE_PE00408 cell division inhibitor MinD protein; septum site-determining protein MinD 688004..688819 Methylocella silvestris BL2 7093713 YP_002360968.1 CDS Msil_0634 NC_011666.1 688816 689151 D TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: bid:Bind_1702 cell division topological specificity factor MinE; cell division topological specificity factor MinE 688816..689151 Methylocella silvestris BL2 7093714 YP_002360969.1 CDS Msil_0635 NC_011666.1 689704 690519 D KEGG: lma:LmjF35.0290 hypothetical protein; hypothetical protein 689704..690519 Methylocella silvestris BL2 7093716 YP_002360970.1 CDS Msil_0636 NC_011666.1 690548 691954 R KEGG: bid:Bind_2103 3-isopropylmalate dehydratase, large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase large subunit complement(690548..691954) Methylocella silvestris BL2 7093717 YP_002360971.1 CDS Msil_0637 NC_011666.1 692090 692491 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bid:Bind_2105 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 692090..692491 Methylocella silvestris BL2 7093718 YP_002360972.1 CDS rplS NC_011666.1 692681 693118 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(692681..693118) Methylocella silvestris BL2 7093719 YP_002360973.1 CDS Msil_0639 NC_011666.1 693243 694061 R KEGG: rpa:RPA0041 hypothetical protein; hypothetical protein complement(693243..694061) Methylocella silvestris BL2 7093720 YP_002360974.1 CDS Msil_0640 NC_011666.1 694151 695407 D KEGG: met:M446_4231 glycosyl transferase group 1; group 1 glycosyl transferase 694151..695407 Methylocella silvestris BL2 7093721 YP_002360975.1 CDS Msil_0641 NC_011666.1 695695 696222 D TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: bid:Bind_2109 translation initiation factor IF-3; translation initiation factor IF-3 695695..696222 Methylocella silvestris BL2 7093722 YP_002360976.1 CDS Msil_0642 NC_011666.1 696372 696911 R PFAM: NUDIX hydrolase; KEGG: bid:Bind_2930 NUDIX hydrolase; NUDIX hydrolase complement(696372..696911) Methylocella silvestris BL2 7093723 YP_002360977.1 CDS Msil_0643 NC_011666.1 697048 698391 R KEGG: bid:Bind_2931 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease complement(697048..698391) Methylocella silvestris BL2 7093724 YP_002360978.1 CDS Msil_0644 NC_011666.1 698388 699761 R PFAM: Peptidase M23; KEGG: bid:Bind_2932 peptidase M23; peptidase M23 complement(698388..699761) Methylocella silvestris BL2 7093725 YP_002360979.1 CDS Msil_0645 NC_011666.1 699970 700455 D TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: sml:Smlt0593 putative methionine sulfoxide reductase; methionine-R-sulfoxide reductase 699970..700455 Methylocella silvestris BL2 7093726 YP_002360980.1 CDS Msil_0646 NC_011666.1 700488 701228 D TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: dac:Daci_3068 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase 700488..701228 Methylocella silvestris BL2 7093727 YP_002360981.1 CDS Msil_0647 NC_011666.1 701225 701707 R SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase complement(701225..701707) Methylocella silvestris BL2 7093728 YP_002360982.1 CDS Msil_0648 NC_011666.1 701720 702160 R TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: bid:Bind_2934 iojap-like protein; iojap family protein complement(701720..702160) Methylocella silvestris BL2 7093729 YP_002360983.1 CDS Msil_0649 NC_011666.1 702405 703289 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: pla:Plav_0870 alpha/beta hydrolase domain-containing protein; Alpha/beta hydrolase fold-3 domain-containing protein 702405..703289 Methylocella silvestris BL2 7093730 YP_002360984.1 CDS Msil_0650 NC_011666.1 703313 703831 R PFAM: regulatory protein MerR; KEGG: bbt:BBta_4629 MerR family transcriptional regulator; MerR family transcriptional regulator complement(703313..703831) Methylocella silvestris BL2 7093731 YP_002360985.1 CDS Msil_0651 NC_011666.1 704017 704355 R TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: bid:Bind_3378 integration host factor, alpha subunit; integration host factor subunit alpha complement(704017..704355) Methylocella silvestris BL2 7093732 YP_002360986.1 CDS Msil_0652 NC_011666.1 704720 705709 R KEGG: bid:Bind_3379 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III complement(704720..705709) Methylocella silvestris BL2 7093733 YP_002360987.1 CDS Msil_0653 NC_011666.1 705713 706822 R TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: bid:Bind_3380 fatty acid/phospholipid synthesis protein PlsX; fatty acid/phospholipid synthesis protein PlsX complement(705713..706822) Methylocella silvestris BL2 7093734 YP_002360988.1 CDS Msil_0654 NC_011666.1 707192 707806 R PFAM: protein of unknown function DUF177; KEGG: bid:Bind_3381 hypothetical protein; hypothetical protein complement(707192..707806) Methylocella silvestris BL2 7093735 YP_002360989.1 CDS Msil_0655 NC_011666.1 707832 708359 R KEGG: bid:Bind_3382 ubiquinol-cytochrome c chaperone; ubiquinol-cytochrome c chaperone complement(707832..708359) Methylocella silvestris BL2 7093736 YP_002360990.1 CDS Msil_0656 NC_011666.1 708583 709074 D PFAM: SmpA/OmlA domain protein; KEGG: bid:Bind_3383 SmpA/OmlA domain protein; SmpA/OmlA domain-containing protein 708583..709074 Methylocella silvestris BL2 7093737 YP_002360991.1 CDS hppA NC_011666.1 709214 711349 R pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase complement(709214..711349) Methylocella silvestris BL2 7093738 YP_002360992.1 CDS Msil_0658 NC_011666.1 711510 712481 R KEGG: bid:Bind_0208 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; thiamine-monophosphate kinase complement(711510..712481) Methylocella silvestris BL2 7093739 YP_002360993.1 CDS Msil_0659 NC_011666.1 712583 713047 R TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: bid:Bind_0207 NusB antitermination factor; NusB antitermination factor complement(712583..713047) Methylocella silvestris BL2 7093740 YP_002360994.1 CDS Msil_0660 NC_011666.1 713044 713538 R TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; KEGG: bid:Bind_0206 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase complement(713044..713538) Methylocella silvestris BL2 7093741 YP_002360995.1 CDS Msil_0661 NC_011666.1 713669 715216 D PFAM: aminoglycoside phosphotransferase; KEGG: azc:AZC_1165 putative kinase; aminoglycoside phosphotransferase 713669..715216 Methylocella silvestris BL2 7093742 YP_002360996.1 CDS Msil_0662 NC_011666.1 715225 716682 R TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; PfkB domain protein; KEGG: azc:AZC_2254 bifunctional protein; rfaE bifunctional protein complement(715225..716682) Methylocella silvestris BL2 7093743 YP_002360997.1 CDS Msil_0663 NC_011666.1 716956 718134 R PFAM: N-acylglucosamine 2-epimerase; KEGG: bja:bll5968 putative mannose-6-phosphate isomerase; mannose-6-phosphate isomerase complement(716956..718134) Methylocella silvestris BL2 7093744 YP_002360998.1 CDS Msil_0664 NC_011666.1 718298 719836 R KEGG: bid:Bind_0565 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI complement(718298..719836) Methylocella silvestris BL2 7093745 YP_002360999.1 CDS Msil_0665 NC_011666.1 719937 720662 R KEGG: bid:Bind_0586 nucleotidyl transferase; nucleotidyl transferase complement(719937..720662) Methylocella silvestris BL2 7093746 YP_002361000.1 CDS Msil_0666 NC_011666.1 720686 722257 R PFAM: aminoglycoside phosphotransferase; protein of unknown function UPF0079; KEGG: bid:Bind_0587 protein of unknown function UPF0079; hypothetical protein complement(720686..722257) Methylocella silvestris BL2 7093747 YP_002361001.1 CDS Msil_0667 NC_011666.1 722247 724826 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: bid:Bind_0588 histidine kinase; multi-sensor signal transduction histidine kinase complement(722247..724826) Methylocella silvestris BL2 7093748 YP_002361002.1 CDS Msil_0668 NC_011666.1 724939 726141 R PFAM: glycosyl transferase family 2; KEGG: bid:Bind_0591 glycosyl transferase family 2; family 2 glycosyl transferase complement(724939..726141) Methylocella silvestris BL2 7093749 YP_002361003.1 CDS Msil_0669 NC_011666.1 726266 727267 D PFAM: aldo/keto reductase; KEGG: dge:Dgeo_2171 aldo/keto reductase; aldo/keto reductase 726266..727267 Methylocella silvestris BL2 7093750 YP_002361004.1 CDS Msil_0670 NC_011666.1 727388 728431 R PFAM: 2OG-Fe(II) oxygenase; KEGG: mex:Mext_3331 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase complement(727388..728431) Methylocella silvestris BL2 7093751 YP_002361005.1 CDS Msil_0671 NC_011666.1 728444 728926 R PFAM: regulatory protein AsnC/Lrp family; KEGG: bid:Bind_2055 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(728444..728926) Methylocella silvestris BL2 7093752 YP_002361006.1 CDS Msil_0672 NC_011666.1 729297 732620 D TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: bid:Bind_0869 carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit 729297..732620 Methylocella silvestris BL2 7093753 YP_002361007.1 CDS greA NC_011666.1 732894 733352 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 732894..733352 Methylocella silvestris BL2 7093754 YP_002361008.1 CDS Msil_0674 NC_011666.1 733396 734700 R KEGG: bid:Bind_2935 HSP70 family molecular chaperone; HSP70 family molecular chaperone complement(733396..734700) Methylocella silvestris BL2 7093755 YP_002361009.1 CDS rpsA NC_011666.1 734789 736537 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(734789..736537) Methylocella silvestris BL2 7093756 YP_002361010.1 CDS Msil_0676 NC_011666.1 736886 737239 R TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: mex:Mext_3182 rare lipoprotein A; rare lipoprotein A complement(736886..737239) Methylocella silvestris BL2 7093757 YP_002361011.1 CDS Msil_0678 NC_011666.1 738007 738339 R PFAM: Rhodanese domain protein; KEGG: bid:Bind_1330 rhodanese domain protein; rhodanese domain-containing protein complement(738007..738339) Methylocella silvestris BL2 7093759 YP_002361012.1 CDS Msil_0679 NC_011666.1 738413 739048 R TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: bja:bll2309 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein A complement(738413..739048) Methylocella silvestris BL2 7093760 YP_002361013.1 CDS Msil_0680 NC_011666.1 739125 739928 R KEGG: bid:Bind_1329 hypothetical protein; hypothetical protein complement(739125..739928) Methylocella silvestris BL2 7093761 YP_002361014.1 CDS Msil_0681 NC_011666.1 740222 741106 D TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; KEGG: bid:Bind_1328 HAD-superfamily hydrolase, subfamily IIA; HAD-superfamily hydrolase 740222..741106 Methylocella silvestris BL2 7093762 YP_002361015.1 CDS Msil_0682 NC_011666.1 741279 742268 D TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: cytidylyltransferase; FAD synthetase; Riboflavin kinase; KEGG: bid:Bind_1327 riboflavin biosynthesis protein RibF; riboflavin biosynthesis protein RibF 741279..742268 Methylocella silvestris BL2 7093763 YP_002361016.1 CDS Msil_0683 NC_011666.1 742549 744129 D TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: bid:Bind_0596 2-isopropylmalate synthase; 2-isopropylmalate synthase 742549..744129 Methylocella silvestris BL2 7093764 YP_002361017.1 CDS Msil_0684 NC_011666.1 744657 746381 R PFAM: Carboxylesterase type B; KEGG: sma:SAV433 carboxylesterase; carboxylesterase type B complement(744657..746381) Methylocella silvestris BL2 7091915 YP_002361018.1 CDS Msil_0685 NC_011666.1 746876 748039 R KEGG: rfr:Rfer_2442 hypothetical protein; hypothetical protein complement(746876..748039) Methylocella silvestris BL2 7091916 YP_002361019.1 CDS Msil_0686 NC_011666.1 748113 749201 R KEGG: mrd:Mrad2831_3475 hypothetical protein; hypothetical protein complement(748113..749201) Methylocella silvestris BL2 7091917 YP_002361020.1 CDS Msil_0687 NC_011666.1 749686 750666 R KEGG: bra:BRADO2202 putative aldo/keto reductase; putative aldo/keto reductase complement(749686..750666) Methylocella silvestris BL2 7091918 YP_002361021.1 CDS Msil_0688 NC_011666.1 750807 751412 R KEGG: oan:Oant_3376 acetyltransferase, CysE/LacA/LpxA/NodL family; CysE/LacA/LpxA/NodL family acetyltransferase complement(750807..751412) Methylocella silvestris BL2 7091919 YP_002361022.1 CDS Msil_0689 NC_011666.1 751409 752602 R PFAM: glycosyl transferase group 1; KEGG: bra:BRADO2218 putative glycosyl transferase; group 1 glycosyl transferase complement(751409..752602) Methylocella silvestris BL2 7091920 YP_002361023.1 CDS Msil_0690 NC_011666.1 753200 754738 D KEGG: mlo:mll3625 ABC transport system permease protein; hypothetical protein 753200..754738 Methylocella silvestris BL2 7091921 YP_002361024.1 CDS Msil_0691 NC_011666.1 755082 755828 R PFAM: glycoside hydrolase family 25; KEGG: bid:Bind_1615 glycoside hydrolase family 25; glycoside hydrolase family protein complement(755082..755828) Methylocella silvestris BL2 7091922 YP_002361025.1 CDS Msil_0692 NC_011666.1 756091 757827 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bid:Bind_1616 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 756091..757827 Methylocella silvestris BL2 7091923 YP_002361026.1 CDS Msil_0693 NC_011666.1 757836 759161 D PFAM: ABC transporter related; ABC transporter, conserved site; SMART: AAA ATPase; KEGG: bid:Bind_1617 ABC transporter related; ABC transporter 757836..759161 Methylocella silvestris BL2 7091924 YP_002361027.1 CDS Msil_0694 NC_011666.1 759746 760474 D PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: bid:Bind_0920 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 759746..760474 Methylocella silvestris BL2 7091925 YP_002361028.1 CDS Msil_0695 NC_011666.1 760705 761289 D hypothetical protein 760705..761289 Methylocella silvestris BL2 7091926 YP_002361029.1 CDS Msil_0696 NC_011666.1 761329 762741 R TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: bid:Bind_1619 magnesium transporter; magnesium transporter complement(761329..762741) Methylocella silvestris BL2 7091927 YP_002361030.1 CDS Msil_0697 NC_011666.1 762912 763805 D PFAM: polysaccharide deacetylase; KEGG: bid:Bind_1620 polysaccharide deacetylase; polysaccharide deacetylase 762912..763805 Methylocella silvestris BL2 7091928 YP_002361031.1 CDS Msil_0698 NC_011666.1 764087 764821 D TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: bid:Bind_1621 lipoate-protein ligase B; lipoate-protein ligase B 764087..764821 Methylocella silvestris BL2 7091930 YP_002361032.1 CDS Msil_0699 NC_011666.1 764887 765576 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bid:Bind_1795 ABC transporter related; ABC transporter-like protein complement(764887..765576) Methylocella silvestris BL2 7091931 YP_002361033.1 CDS Msil_0700 NC_011666.1 765579 766850 R TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: bid:Bind_1796 lipoprotein releasing system, transmembrane protein, LolC/E family; lipoprotein releasing system transmembrane protein LolC/E family complement(765579..766850) Methylocella silvestris BL2 7091932 YP_002361034.1 CDS Msil_0701 NC_011666.1 766847 768169 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(766847..768169) Methylocella silvestris BL2 7091933 YP_002361035.1 CDS Msil_0702 NC_011666.1 768260 768673 R PFAM: PilT protein domain protein; KEGG: acr:Acry_3511 PilT protein domain protein; PilT protein domain-containing protein complement(768260..768673) Methylocella silvestris BL2 7091934 YP_002361036.1 CDS Msil_0703 NC_011666.1 768670 768909 R PFAM: Rv0623 family protein transcription factor; KEGG: acr:Acry_3269 Rv0623 family protein transcription factor; protein transcription factor complement(768670..768909) Methylocella silvestris BL2 7091935 YP_002361037.1 CDS Msil_0704 NC_011666.1 769016 769417 R PFAM: membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG); KEGG: mag:amb2570 hypothetical protein; eicosanoid and glutathione metabolism membrane-associated protein complement(769016..769417) Methylocella silvestris BL2 7091936 YP_002361038.1 CDS Msil_0705 NC_011666.1 769517 770104 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: sme:SMc00379 putative oxidoreductase protein; NAD(P)H dehydrogenase (quinone) 769517..770104 Methylocella silvestris BL2 7091937 YP_002361039.1 CDS Msil_0706 NC_011666.1 770236 770565 D PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK0927 acetyltransferase; N-acetyltransferase GCN5 770236..770565 Methylocella silvestris BL2 7091938 YP_002361040.1 CDS Msil_0707 NC_011666.1 770895 771557 D hypothetical protein 770895..771557 Methylocella silvestris BL2 7091939 YP_002361041.1 CDS Msil_0708 NC_011666.1 771568 773406 R TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: bid:Bind_1801 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; glucosamine/fructose-6-phosphate aminotransferase complement(771568..773406) Methylocella silvestris BL2 7091940 YP_002361042.1 CDS Msil_0709 NC_011666.1 773482 774864 R TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: bid:Bind_1802 UDP-N-acetylglucosamine pyrophosphorylase; UDP-N-acetylglucosamine pyrophosphorylase complement(773482..774864) Methylocella silvestris BL2 7091941 YP_002361043.1 CDS mdoD NC_011666.1 775070 776662 D involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D 775070..776662 Methylocella silvestris BL2 7091942 YP_002361044.1 CDS Msil_0711 NC_011666.1 776659 778863 D necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 776659..778863 Methylocella silvestris BL2 7091943 YP_002361045.1 CDS Msil_0712 NC_011666.1 778871 779794 R PFAM: glycosyl transferase family 2; KEGG: sus:Acid_0612 glycosyl transferase family protein; family 2 glycosyl transferase complement(778871..779794) Methylocella silvestris BL2 7091944 YP_002361046.1 CDS Msil_0713 NC_011666.1 780151 781074 R PFAM: glycosyl transferase family 2; KEGG: sus:Acid_0612 glycosyl transferase family protein; family 2 glycosyl transferase complement(780151..781074) Methylocella silvestris BL2 7091945 YP_002361047.1 CDS Msil_0714 NC_011666.1 781174 782301 R KEGG: met:M446_3992 hypothetical protein; hypothetical protein complement(781174..782301) Methylocella silvestris BL2 7091946 YP_002361048.1 CDS Msil_0715 NC_011666.1 782339 784351 R KEGG: msm:MSMEG_4988 integral membrane protein; hypothetical protein complement(782339..784351) Methylocella silvestris BL2 7091947 YP_002361049.1 CDS Msil_0716 NC_011666.1 784443 787142 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase complement(784443..787142) Methylocella silvestris BL2 7091948 YP_002361050.1 CDS Msil_0717 NC_011666.1 787591 789519 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 787591..789519 Methylocella silvestris BL2 7091949 YP_002361051.1 CDS Msil_0718 NC_011666.1 789605 790372 D TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: met:M446_2377 hemolysin A; hemolysin A 789605..790372 Methylocella silvestris BL2 7091950 YP_002361052.1 CDS Msil_0719 NC_011666.1 790369 791637 D KEGG: bid:Bind_1814 putative RNA methyltransferase; putative RNA methyltransferase 790369..791637 Methylocella silvestris BL2 7091951 YP_002361053.1 CDS Msil_0720 NC_011666.1 791752 792522 R PFAM: Rhomboid family protein; KEGG: bid:Bind_0940 rhomboid family protein; rhomboid family protein complement(791752..792522) Methylocella silvestris BL2 7091952 YP_002361054.1 CDS Msil_0721 NC_011666.1 792589 793720 R KEGG: bpm:BURPS1710b_3602 hypothetical protein; hypothetical protein complement(join(792589..793650,793652..793720)) Methylocella silvestris BL2 7091953 YP_002361055.1 CDS Msil_0722 NC_011666.1 793859 794563 R KEGG: eta:ETA_13730 oxalate decarboxylase OxdD; TIGRFAM: bicupin, oxalate decarboxylase family; PFAM: Cupin domain protein; protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; oxalate decarboxylase family bicupin complement(793859..794563) Methylocella silvestris BL2 7091954 YP_002361056.1 CDS Msil_0723 NC_011666.1 794628 795161 D hypothetical protein 794628..795161 Methylocella silvestris BL2 7091955 YP_002361057.1 CDS Msil_0724 NC_011666.1 795206 796381 D hypothetical protein 795206..796381 Methylocella silvestris BL2 7091956 YP_002361058.1 CDS Msil_0725 NC_011666.1 796483 796716 D hypothetical protein 796483..796716 Methylocella silvestris BL2 7091957 YP_002361059.1 CDS Msil_0726 NC_011666.1 796831 797406 D hypothetical protein 796831..797406 Methylocella silvestris BL2 7091958 YP_002361060.1 CDS Msil_0727 NC_011666.1 797499 799913 R KEGG: bid:Bind_0934 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein complement(797499..799913) Methylocella silvestris BL2 7091959 YP_002361061.1 CDS Msil_0728 NC_011666.1 800191 801675 R PFAM: cell wall hydrolase/autolysin; KEGG: bid:Bind_0933 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase complement(800191..801675) Methylocella silvestris BL2 7091960 YP_002361062.1 CDS Msil_0729 NC_011666.1 802601 805843 D TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease E and G; KEGG: bid:Bind_0931 ribonuclease, Rne/Rng family; ribonuclease, Rne/Rng family 802601..805843 Methylocella silvestris BL2 7091961 YP_002361063.1 CDS Msil_0730 NC_011666.1 806084 806866 D PFAM: DSBA oxidoreductase; KEGG: bid:Bind_1661 DsbA oxidoreductase; DSBA oxidoreductase 806084..806866 Methylocella silvestris BL2 7091962 YP_002361064.1 CDS Msil_0731 NC_011666.1 806880 808241 R PFAM: cytochrome P450; KEGG: mxa:MXAN_2304 cytochrome P450 family protein; cytochrome P450 complement(806880..808241) Methylocella silvestris BL2 7091963 YP_002361065.1 CDS Msil_0732 NC_011666.1 808430 808696 R KEGG: azc:AZC_4518 hypothetical protein; hypothetical protein complement(808430..808696) Methylocella silvestris BL2 7091964 YP_002361066.1 CDS Msil_0733 NC_011666.1 809212 810648 D PFAM: FAD linked oxidase domain protein; KEGG: bid:Bind_2016 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 809212..810648 Methylocella silvestris BL2 7091966 YP_002361067.1 CDS Msil_0734 NC_011666.1 810774 812459 R PFAM: porin; KEGG: bid:Bind_1873 porin; porin complement(810774..812459) Methylocella silvestris BL2 7091967 YP_002361068.1 CDS Msil_0735 NC_011666.1 813412 813906 D KEGG: bid:Bind_1875 hypothetical protein; hypothetical protein 813412..813906 Methylocella silvestris BL2 7091969 YP_002361069.1 CDS Msil_0736 NC_011666.1 814304 814753 R KEGG: bte:BTH_I1155 hypothetical protein; hypothetical protein complement(814304..814753) Methylocella silvestris BL2 7091970 YP_002361070.1 CDS Msil_0737 NC_011666.1 815456 816943 R TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: bid:Bind_1877 glutamyl-tRNA(Gln) amidotransferase, B subunit; glutamyl-tRNA(Gln) amidotransferase subunit B complement(815456..816943) Methylocella silvestris BL2 7091971 YP_002361071.1 CDS gatA NC_011666.1 816994 818475 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(816994..818475) Methylocella silvestris BL2 7091972 YP_002361072.1 CDS Msil_0739 NC_011666.1 818528 818815 R TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: bid:Bind_1879 glutamyl-tRNA(Gln) amidotransferase, C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C complement(818528..818815) Methylocella silvestris BL2 7091973 YP_002361073.1 CDS Msil_0740 NC_011666.1 818980 819771 D PFAM: alpha/beta hydrolase fold; KEGG: mag:amb3246 hydrolase or acyltransferase; alpha/beta hydrolase fold protein 818980..819771 Methylocella silvestris BL2 7091974 YP_002361074.1 CDS Msil_0741 NC_011666.1 819806 820504 R PFAM: beta-lactamase domain protein; KEGG: mlo:mll0680 metal-dependent hydrolase; beta-lactamase domain-containing protein complement(819806..820504) Methylocella silvestris BL2 7091975 YP_002361075.1 CDS Msil_0742 NC_011666.1 820575 821060 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 820575..821060 Methylocella silvestris BL2 7091976 YP_002361076.1 CDS Msil_0743 NC_011666.1 821065 822549 R PFAM: amino acid permease-associated region; KEGG: bid:Bind_1663 amino acid permease-associated region; amino acid permease-associated protein complement(821065..822549) Methylocella silvestris BL2 7091977 YP_002361077.1 CDS Msil_0744 NC_011666.1 822676 823938 D PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bid:Bind_1664 amine oxidase; amine oxidase 822676..823938 Methylocella silvestris BL2 7091978 YP_002361078.1 CDS Msil_0745 NC_011666.1 824011 825252 D PFAM: protein of unknown function DUF482; KEGG: bid:Bind_1665 protein of unknown function DUF482; hypothetical protein 824011..825252 Methylocella silvestris BL2 7091979 YP_002361079.1 CDS Msil_0746 NC_011666.1 825356 825793 D PFAM: histidine triad (HIT) protein; KEGG: bid:Bind_1666 histidine triad (HIT) protein; histidine triad (HIT) protein 825356..825793 Methylocella silvestris BL2 7091980 YP_002361080.1 CDS Msil_0747 NC_011666.1 825957 828437 R KEGG: bid:Bind_1667 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; ATP-dependent Clp protease ATP-binding subunit clpA; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA complement(825957..828437) Methylocella silvestris BL2 7091981 YP_002361081.1 CDS Msil_0748 NC_011666.1 828451 828960 R PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: bid:Bind_1668 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS complement(828451..828960) Methylocella silvestris BL2 7091982 YP_002361082.1 CDS Msil_0749 NC_011666.1 829545 829886 R KEGG: bid:Bind_1669 hypothetical protein; hypothetical protein complement(829545..829886) Methylocella silvestris BL2 7091983 YP_002361083.1 CDS Msil_0750 NC_011666.1 830121 831965 D PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; KEGG: bid:Bind_1670 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 830121..831965 Methylocella silvestris BL2 7091984 YP_002361084.1 CDS Msil_0751 NC_011666.1 832035 832766 R PFAM: heat shock protein DnaJ domain protein; KEGG: bid:Bind_1671 heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein complement(832035..832766) Methylocella silvestris BL2 7091985 YP_002361085.1 CDS Msil_0752 NC_011666.1 832892 833605 R KEGG: rpd:RPD_3060 hypothetical protein; hypothetical protein complement(832892..833605) Methylocella silvestris BL2 7091986 YP_002361086.1 CDS Msil_0753 NC_011666.1 833654 834307 R PFAM: Glutathione S-transferase domain; KEGG: bid:Bind_1672 glutathione S-transferase domain; glutathione S-transferase domain-containing protein complement(833654..834307) Methylocella silvestris BL2 7091987 YP_002361087.1 CDS Msil_0754 NC_011666.1 834435 835124 D PFAM: protein of unknown function DUF599; KEGG: met:M446_1810 protein of unknown function DUF599; hypothetical protein 834435..835124 Methylocella silvestris BL2 7091988 YP_002361088.1 CDS Msil_0755 NC_011666.1 835139 835933 R PFAM: protein of unknown function DUF218; KEGG: bid:Bind_1673 protein of unknown function DUF218; hypothetical protein complement(835139..835933) Methylocella silvestris BL2 7091989 YP_002361089.1 CDS Msil_0756 NC_011666.1 835992 836213 R PFAM: protein of unknown function DUF329; KEGG: met:M446_4313 protein of unknown function DUF329; hypothetical protein complement(835992..836213) Methylocella silvestris BL2 7091990 YP_002361090.1 CDS Msil_0757 NC_011666.1 836223 836870 R TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: bid:Bind_1675 maf protein; maf protein complement(836223..836870) Methylocella silvestris BL2 7091991 YP_002361091.1 CDS infA NC_011666.1 836924 837142 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(836924..837142) Methylocella silvestris BL2 7091992 YP_002361092.1 CDS Msil_0759 NC_011666.1 837352 838257 R KEGG: bid:Bind_1678 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase complement(837352..838257) Methylocella silvestris BL2 7091993 YP_002361093.1 CDS Msil_0760 NC_011666.1 838327 838848 R KEGG: bid:Bind_2315 hypothetical protein; hypothetical protein complement(838327..838848) Methylocella silvestris BL2 7091994 YP_002361094.1 CDS Msil_0761 NC_011666.1 838924 839907 R PFAM: aminoglycoside phosphotransferase; KEGG: sus:Acid_2507 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(838924..839907) Methylocella silvestris BL2 7091995 YP_002361095.1 CDS engA NC_011666.1 839919 841322 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(839919..841322) Methylocella silvestris BL2 7091585 YP_002361096.1 CDS Msil_0763 NC_011666.1 841322 842308 R KEGG: bid:Bind_2318 hypothetical protein; hypothetical protein complement(841322..842308) Methylocella silvestris BL2 7092621 YP_002361097.1 CDS Msil_0764 NC_011666.1 842477 843343 R PFAM: aldo/keto reductase; KEGG: dge:Dgeo_1685 aldo/keto reductase; aldo/keto reductase complement(842477..843343) Methylocella silvestris BL2 7092622 YP_002361098.1 CDS Msil_0765 NC_011666.1 843560 844156 R KEGG: mes:Meso_4140 putative transporter; putative transporter complement(843560..844156) Methylocella silvestris BL2 7092623 YP_002361099.1 CDS Msil_0766 NC_011666.1 844262 844573 D KEGG: aba:Acid345_1090 hypothetical protein; hypothetical protein 844262..844573 Methylocella silvestris BL2 7092624 YP_002361100.1 CDS Msil_0767 NC_011666.1 845067 846035 D KEGG: azc:AZC_3163 ABC transporter substrate binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter periplasmic substrate-binding protein 845067..846035 Methylocella silvestris BL2 7092625 YP_002361101.1 CDS Msil_0768 NC_011666.1 846032 846892 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO0532 putative sulfonate ABC transporter, permease protein (SsuC/YcbM-like); binding-protein-dependent transport system inner membrane protein 846032..846892 Methylocella silvestris BL2 7092626 YP_002361102.1 CDS Msil_0769 NC_011666.1 846897 847655 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpt:Rpal_2893 ABC transporter related; ABC transporter-like protein 846897..847655 Methylocella silvestris BL2 7092627 YP_002361103.1 CDS Msil_0770 NC_011666.1 847686 848873 D KEGG: bbt:BBta_1866 alkanesulfonate monooxygenase; Alkanesulfonate monooxygenase 847686..848873 Methylocella silvestris BL2 7092628 YP_002361104.1 CDS Msil_0771 NC_011666.1 848870 850315 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rle:RL0670 hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 848870..850315 Methylocella silvestris BL2 7092629 YP_002361105.1 CDS Msil_0772 NC_011666.1 850508 851416 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_1398 probable permease of ABC transporter; binding-protein-dependent transport system inner membrane protein 850508..851416 Methylocella silvestris BL2 7092630 YP_002361106.1 CDS Msil_0773 NC_011666.1 851421 852209 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mll4555 aliphatic sulfonate transport ATP-binding protein; ABC transporter-like protein 851421..852209 Methylocella silvestris BL2 7092631 YP_002361107.1 CDS Msil_0774 NC_011666.1 852251 853201 D KEGG: xau:Xaut_1211 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter periplasmic substrate-binding protein 852251..853201 Methylocella silvestris BL2 7092632 YP_002361108.1 CDS Msil_0775 NC_011666.1 853358 853603 D KEGG: bid:Bind_1745 hypothetical protein; hypothetical protein 853358..853603 Methylocella silvestris BL2 7092633 YP_002361109.1 CDS Msil_0776 NC_011666.1 853646 853849 D KEGG: met:M446_2546 hypothetical protein; hypothetical protein 853646..853849 Methylocella silvestris BL2 7092634 YP_002361110.1 CDS glmM NC_011666.1 853917 855266 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(853917..855266) Methylocella silvestris BL2 7092635 YP_002361111.1 CDS Msil_0778 NC_011666.1 855620 856780 D TIGRFAM: tol-pal system protein YbgF; KEGG: bid:Bind_3636 tol-pal system protein YbgF; tol-pal system protein YbgF 855620..856780 Methylocella silvestris BL2 7092636 YP_002361112.1 CDS Msil_0779 NC_011666.1 856774 857907 D TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: bid:Bind_3637 tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase 856774..857907 Methylocella silvestris BL2 7092637 YP_002361113.1 CDS Msil_0780 NC_011666.1 858062 859993 D KEGG: bid:Bind_3638 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 858062..859993 Methylocella silvestris BL2 7092638 YP_002361114.1 CDS Msil_0781 NC_011666.1 860096 861181 D PFAM: protein of unknown function DUF1176; KEGG: cvi:CV_1422 hypothetical protein; hypothetical protein 860096..861181 Methylocella silvestris BL2 7092639 YP_002361115.1 CDS Msil_0782 NC_011666.1 861251 862393 R PFAM: beta-lactamase domain protein; KEGG: bid:Bind_0186 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(861251..862393) Methylocella silvestris BL2 7092640 YP_002361116.1 CDS Msil_0783 NC_011666.1 862536 863045 R TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: bid:Bind_3400 peptidoglycan-associated lipoprotein; peptidoglycan-associated lipoprotein complement(862536..863045) Methylocella silvestris BL2 7092641 YP_002361117.1 CDS Msil_0785 NC_011666.1 866219 867175 R PFAM: protein of unknown function DUF58; KEGG: bid:Bind_2843 protein of unknown function DUF58; hypothetical protein complement(866219..867175) Methylocella silvestris BL2 7092643 YP_002361118.1 CDS Msil_0786 NC_011666.1 867177 868178 R PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: bid:Bind_2844 ATPase associated with various cellular activities AAA_3; ATPase complement(867177..868178) Methylocella silvestris BL2 7092644 YP_002361119.1 CDS Msil_0787 NC_011666.1 868258 868986 D PFAM: protein of unknown function DUF1285; KEGG: bja:blr2466 hypothetical protein; hypothetical protein 868258..868986 Methylocella silvestris BL2 7092645 YP_002361120.1 CDS Msil_0788 NC_011666.1 868983 869645 D PFAM: NUDIX hydrolase; KEGG: met:M446_4477 NUDIX hydrolase; NUDIX hydrolase 868983..869645 Methylocella silvestris BL2 7092646 YP_002361121.1 CDS Msil_0789 NC_011666.1 869645 869905 D KEGG: met:M446_4476 hypothetical protein; hypothetical protein 869645..869905 Methylocella silvestris BL2 7092647 YP_002361122.1 CDS Msil_0790 NC_011666.1 869919 871178 D PFAM: Polynucleotide adenylyltransferase region; KEGG: bid:Bind_2846 polynucleotide adenylyltransferase region; polynucleotide adenylyltransferase 869919..871178 Methylocella silvestris BL2 7092648 YP_002361123.1 CDS Msil_0791 NC_011666.1 871299 871559 D KEGG: atc:AGR_C_4086 hypothetical protein; hypothetical protein 871299..871559 Methylocella silvestris BL2 7092649 YP_002361124.1 CDS Msil_0792 NC_011666.1 871591 872367 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_2906 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(871591..872367) Methylocella silvestris BL2 7092650 YP_002361125.1 CDS Msil_0793 NC_011666.1 872450 873022 R PFAM: cytochrome B561; KEGG: mrd:Mrad2831_4694 cytochrome b561; cytochrome B561 complement(872450..873022) Methylocella silvestris BL2 7092651 YP_002361126.1 CDS groES NC_011666.1 873372 873659 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 873372..873659 Methylocella silvestris BL2 7092652 YP_002361127.1 CDS Msil_0795 NC_011666.1 873706 875349 D TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: bid:Bind_1738 chaperonin GroEL; chaperonin GroEL 873706..875349 Methylocella silvestris BL2 7092653 YP_002361128.1 CDS Msil_0796 NC_011666.1 875536 875892 D PFAM: histone family protein DNA-binding protein; KEGG: bid:Bind_1739 histone family protein DNA-binding protein; histone family protein DNA-binding protein 875536..875892 Methylocella silvestris BL2 7092654 YP_002361129.1 CDS Msil_0797 NC_011666.1 876092 876571 D KEGG: mac:MA0651 hypothetical protein; hypothetical protein 876092..876571 Methylocella silvestris BL2 7092655 YP_002361130.1 CDS Msil_0798 NC_011666.1 876900 877679 D hypothetical protein 876900..877679 Methylocella silvestris BL2 7092656 YP_002361131.1 CDS Msil_0799 NC_011666.1 878292 880397 D PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: bid:Bind_1740 ABC transporter domain protein; ABC transporter-like protein 878292..880397 Methylocella silvestris BL2 7092657 YP_002361132.1 CDS Msil_0800 NC_011666.1 880447 881121 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: rpc:RPC_3189 transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 880447..881121 Methylocella silvestris BL2 7092658 YP_002361133.1 CDS Msil_0801 NC_011666.1 881186 881458 D KEGG: gdi:GDI3488 hypothetical protein; hypothetical protein 881186..881458 Methylocella silvestris BL2 7092659 YP_002361134.1 CDS Msil_0802 NC_011666.1 881469 881783 R KEGG: tfu:Tfu_0404 hypothetical protein; hypothetical protein complement(881469..881783) Methylocella silvestris BL2 7092660 YP_002361135.1 CDS hisG NC_011666.1 881832 882809 R long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase complement(881832..882809) Methylocella silvestris BL2 7092661 YP_002361136.1 CDS Msil_0804 NC_011666.1 882806 883921 R PFAM: tRNA synthetase class II (G H P and S); KEGG: bid:Bind_1775 tRNA synthetase class II (G H P and S); tRNA synthetase class II (G H P and S) complement(882806..883921) Methylocella silvestris BL2 7092662 YP_002361137.1 CDS hisS NC_011666.1 884161 885666 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(884161..885666) Methylocella silvestris BL2 7092663 YP_002361138.1 CDS Msil_0806 NC_011666.1 885846 886646 D KEGG: bid:Bind_1777 putative periplasmic ligand-binding sensor protein; putative periplasmic ligand-binding sensor protein 885846..886646 Methylocella silvestris BL2 7092664 YP_002361139.1 CDS Msil_0807 NC_011666.1 886692 887933 R KEGG: mag:amb3787 hypothetical protein; hypothetical protein complement(886692..887933) Methylocella silvestris BL2 7092665 YP_002361140.1 CDS Msil_0808 NC_011666.1 888427 889773 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bid:Bind_1778 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 888427..889773 Methylocella silvestris BL2 7092666 YP_002361141.1 CDS Msil_0809 NC_011666.1 889927 890442 D PFAM: DinB family protein; KEGG: sme:SMc00593 hypothetical protein; DinB family protein 889927..890442 Methylocella silvestris BL2 7092667 YP_002361142.1 CDS Msil_0810 NC_011666.1 890549 891592 R PFAM: Patatin; KEGG: bid:Bind_3008 patatin; patatin complement(890549..891592) Methylocella silvestris BL2 7092668 YP_002361143.1 CDS Msil_0811 NC_011666.1 891589 892374 R TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bid:Bind_3009 3-hydroxybutyrate dehydrogenase; 3-hydroxybutyrate dehydrogenase complement(891589..892374) Methylocella silvestris BL2 7092669 YP_002361144.1 CDS Msil_0812 NC_011666.1 892563 893066 D KEGG: bid:Bind_3010 putative ferric uptake regulator, Fur family; Fe2+/Zn2+ uptake regulation protein-like protein 892563..893066 Methylocella silvestris BL2 7092670 YP_002361145.1 CDS Msil_0813 NC_011666.1 893167 893697 R hypothetical protein complement(893167..893697) Methylocella silvestris BL2 7092671 YP_002361146.1 CDS ispG NC_011666.1 893911 895224 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 893911..895224 Methylocella silvestris BL2 7092672 YP_002361147.1 CDS Msil_0815 NC_011666.1 895350 895841 D PFAM: heat shock protein DnaJ domain protein; KEGG: xau:Xaut_2284 heat shock protein DnaJ domain-containing protein; heat shock protein DnaJ domain-containing protein 895350..895841 Methylocella silvestris BL2 7092673 YP_002361148.1 CDS Msil_0816 NC_011666.1 895864 898548 R KEGG: xau:Xaut_3114 hypothetical protein; hypothetical protein complement(895864..898548) Methylocella silvestris BL2 7092674 YP_002361149.1 CDS Msil_0817 NC_011666.1 898760 899437 R PFAM: protein of unknown function DUF1345; KEGG: bid:Bind_0422 protein of unknown function DUF1345; hypothetical protein complement(898760..899437) Methylocella silvestris BL2 7092675 YP_002361150.1 CDS Msil_0818 NC_011666.1 899470 900399 R PFAM: Polyprenyl synthetase; KEGG: bid:Bind_0423 polyprenyl synthetase; polyprenyl synthetase complement(899470..900399) Methylocella silvestris BL2 7092676 YP_002361151.1 CDS Msil_0819 NC_011666.1 900509 901195 D TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: bid:Bind_0424 monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase 900509..901195 Methylocella silvestris BL2 7092677 YP_002361152.1 CDS rpmF NC_011666.1 901368 901556 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 901368..901556 Methylocella silvestris BL2 7092678 YP_002361153.1 CDS Msil_0821 NC_011666.1 901635 902219 R hypothetical protein complement(901635..902219) Methylocella silvestris BL2 7092679 YP_002361154.1 CDS Msil_0822 NC_011666.1 902448 903440 R KEGG: bid:Bind_3234 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B complement(902448..903440) Methylocella silvestris BL2 7092680 YP_002361155.1 CDS Msil_0823 NC_011666.1 903635 904051 R KEGG: bja:bll6206 hypothetical protein; hypothetical protein complement(903635..904051) Methylocella silvestris BL2 7092681 YP_002361156.1 CDS Msil_0824 NC_011666.1 904147 905022 R TIGRFAM: TonB family protein; KEGG: bid:Bind_0233 TonB family protein; TonB family protein complement(904147..905022) Methylocella silvestris BL2 7092682 YP_002361157.1 CDS Msil_0825 NC_011666.1 905025 905486 R TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: azc:AZC_1259 TonB system transport protein; TonB system transport protein ExbD complement(905025..905486) Methylocella silvestris BL2 7092683 YP_002361158.1 CDS Msil_0826 NC_011666.1 905491 906537 R TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; KEGG: bid:Bind_0235 TonB-system energizer ExbB; tonB-system energizer ExbB complement(905491..906537) Methylocella silvestris BL2 7092684 YP_002361159.1 CDS Msil_0827 NC_011666.1 906856 908481 D PFAM: ferredoxin-dependent glutamate synthase; KEGG: rpt:Rpal_0474 ferredoxin-dependent glutamate synthase; ferredoxin-dependent glutamate synthase 906856..908481 Methylocella silvestris BL2 7092685 YP_002361160.1 CDS Msil_0828 NC_011666.1 908519 909352 R PFAM: UspA domain protein; KEGG: bid:Bind_3018 UspA domain protein; UspA domain-containing protein complement(908519..909352) Methylocella silvestris BL2 7092686 YP_002361161.1 CDS Msil_0829 NC_011666.1 909568 914283 D KEGG: dsh:Dshi_0990 putative DNA helicase related protein; putative DNA helicase-like protein 909568..914283 Methylocella silvestris BL2 7092687 YP_002361162.1 CDS hslO NC_011666.1 914287 915264 R becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin complement(914287..915264) Methylocella silvestris BL2 7092688 YP_002361163.1 CDS Msil_0831 NC_011666.1 915261 916214 R KEGG: met:M446_6535 ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; ornithine carbamoyltransferase complement(915261..916214) Methylocella silvestris BL2 7092689 YP_002361164.1 CDS Msil_0832 NC_011666.1 916211 917413 R TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: bid:Bind_0150 acetylornithine and succinylornithine aminotransferase; acetylornithine and succinylornithine aminotransferase complement(916211..917413) Methylocella silvestris BL2 7092690 YP_002361165.1 CDS Msil_0833 NC_011666.1 918405 919067 D PFAM: GcrA cell cycle regulator; KEGG: bid:Bind_3667 GcrA cell cycle regulator; GcrA cell cycle regulator 918405..919067 Methylocella silvestris BL2 7092691 YP_002361166.1 CDS Msil_0834 NC_011666.1 919206 920003 R TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bid:Bind_3413 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator PhoB complement(919206..920003) Methylocella silvestris BL2 7092692 YP_002361167.1 CDS Msil_0835 NC_011666.1 920008 920718 R TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: bid:Bind_3412 phosphate uptake regulator, PhoU; phosphate uptake regulator PhoU complement(920008..920718) Methylocella silvestris BL2 7092693 YP_002361168.1 CDS Msil_0836 NC_011666.1 920805 921587 R KEGG: bid:Bind_3411 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase complement(920805..921587) Methylocella silvestris BL2 7092694 YP_002361169.1 CDS Msil_0837 NC_011666.1 921584 922423 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bid:Bind_3410 phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter permease complement(921584..922423) Methylocella silvestris BL2 7092695 YP_002361170.1 CDS Msil_0838 NC_011666.1 922427 923416 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll3722 phosphate ABC transporter, permease protein (PstC); phosphate ABC transporter permease complement(922427..923416) Methylocella silvestris BL2 7092696 YP_002361171.1 CDS Msil_0839 NC_011666.1 923527 924570 R TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rpa:RPA4780 periplasmic phosphate binding protein; phosphate ABC transporter substrate-binding protein complement(923527..924570) Methylocella silvestris BL2 7092697 YP_002361172.1 CDS Msil_0840 NC_011666.1 924808 925899 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bid:Bind_3196 histidine kinase; histidine kinase complement(924808..925899) Methylocella silvestris BL2 7092698 YP_002361173.1 CDS Msil_0841 NC_011666.1 926070 927089 R KEGG: bid:Bind_3194 integral membrane protein-like protein; hypothetical protein complement(926070..927089) Methylocella silvestris BL2 7092699 YP_002361174.1 CDS Msil_0842 NC_011666.1 927843 928034 D KEGG: bid:Bind_0948 hypothetical protein; hypothetical protein 927843..928034 Methylocella silvestris BL2 7092700 YP_002361175.1 CDS Msil_0843 NC_011666.1 928147 929049 D PFAM: metallophosphoesterase; KEGG: bid:Bind_0947 metallophosphoesterase; metallophosphoesterase 928147..929049 Methylocella silvestris BL2 7092701 YP_002361176.1 CDS Msil_0844 NC_011666.1 929171 930100 D PFAM: histone deacetylase superfamily; KEGG: bid:Bind_0946 histone deacetylase superfamily; histone deacetylase superfamily protein 929171..930100 Methylocella silvestris BL2 7092323 YP_002361177.1 CDS Msil_0845 NC_011666.1 930102 931391 R TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: bid:Bind_0944 transcriptional regulator, XRE family; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(930102..931391) Methylocella silvestris BL2 7093277 YP_002361178.1 CDS Msil_0846 NC_011666.1 931463 932578 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(931463..932578) Methylocella silvestris BL2 7093278 YP_002361179.1 CDS smpB NC_011666.1 932624 933100 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(932624..933100) Methylocella silvestris BL2 7093279 YP_002361180.1 CDS Msil_0848 NC_011666.1 933120 934016 R KEGG: bid:Bind_1870 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase complement(933120..934016) Methylocella silvestris BL2 7093280 YP_002361181.1 CDS Msil_0849 NC_011666.1 934225 936468 D PFAM: Lytic transglycosylase catalytic; KEGG: bid:Bind_1871 lytic transglycosylase catalytic; lytic transglycosylase 934225..936468 Methylocella silvestris BL2 7093281 YP_002361182.1 CDS Msil_0850 NC_011666.1 936488 936883 R PFAM: response regulator receiver; KEGG: rpc:RPC_1228 response regulator receiver domain protein (CheY-like); response regulator receiver protein complement(936488..936883) Methylocella silvestris BL2 7093282 YP_002361183.1 CDS Msil_0851 NC_011666.1 937251 938177 D PFAM: alpha/beta hydrolase fold; KEGG: bid:Bind_1872 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 937251..938177 Methylocella silvestris BL2 7093283 YP_002361184.1 CDS Msil_0852 NC_011666.1 939017 939409 R PFAM: Secreted repeat of unknown function; KEGG: rpb:RPB_1064 secreted repeat protein; hypothetical protein complement(939017..939409) Methylocella silvestris BL2 7093285 YP_002361185.1 CDS Msil_0853 NC_011666.1 939510 940334 R KEGG: xau:Xaut_2661 putative transmembrane anti-sigma factor; putative transmembrane anti-sigma factor complement(939510..940334) Methylocella silvestris BL2 7093286 YP_002361186.1 CDS Msil_0854 NC_011666.1 940331 940858 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: xau:Xaut_2662 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit complement(940331..940858) Methylocella silvestris BL2 7093287 YP_002361187.1 CDS Msil_0855 NC_011666.1 941192 945319 R TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: mxa:MXAN_4000 non-ribosomal peptide synthetase; amino acid adenylation domain-containing protein complement(941192..945319) Methylocella silvestris BL2 7093288 YP_002361188.1 CDS Msil_0856 NC_011666.1 945765 946058 D hypothetical protein 945765..946058 Methylocella silvestris BL2 7093289 YP_002361189.1 CDS Msil_0857 NC_011666.1 946195 947406 D PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll2771 hypothetical protein; major facilitator superfamily protein 946195..947406 Methylocella silvestris BL2 7093290 YP_002361190.1 CDS Msil_0858 NC_011666.1 947479 948678 R PFAM: Patatin; KEGG: bid:Bind_1856 patatin; patatin complement(947479..948678) Methylocella silvestris BL2 7093291 YP_002361191.1 CDS Msil_0859 NC_011666.1 948958 949659 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bja:blr2774 hypothetical protein; alkyl hydroperoxide reductase 948958..949659 Methylocella silvestris BL2 7093292 YP_002361192.1 CDS Msil_0860 NC_011666.1 949676 950563 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bja:bll2775 transcriptional regulatory protein; LysR family transcriptional regulator complement(949676..950563) Methylocella silvestris BL2 7093293 YP_002361193.1 CDS Msil_0861 NC_011666.1 950770 951030 D hypothetical protein 950770..951030 Methylocella silvestris BL2 7093294 YP_002361194.1 CDS Msil_0862 NC_011666.1 951062 951544 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: bra:BRADO2447 putative signal peptide; cupin 951062..951544 Methylocella silvestris BL2 7093295 YP_002361195.1 CDS Msil_0863 NC_011666.1 951631 951876 D KEGG: bid:Bind_1236 hypothetical protein; hypothetical protein 951631..951876 Methylocella silvestris BL2 7093296 YP_002361196.1 CDS Msil_0864 NC_011666.1 952029 952808 R PFAM: oxidoreductase molybdopterin binding; KEGG: swi:Swit_0563 oxidoreductase, molybdopterin binding; molybdopterin-binding oxidoreductase complement(952029..952808) Methylocella silvestris BL2 7093297 YP_002361197.1 CDS Msil_0865 NC_011666.1 952801 953667 R PFAM: cytochrome B561; KEGG: rle:RL3018 putative transmembrane b-type cytochrome protein; cytochrome B561 complement(952801..953667) Methylocella silvestris BL2 7093298 YP_002361198.1 CDS Msil_0866 NC_011666.1 953753 954013 R TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: gvi:gll1155 hypothetical protein; pentapeptide MXKDX repeat-containing protein complement(953753..954013) Methylocella silvestris BL2 7093299 YP_002361199.1 CDS Msil_0867 NC_011666.1 954285 955808 R PFAM: ferredoxin-dependent glutamate synthase; KEGG: pla:Plav_1995 ferredoxin-dependent glutamate synthase; ferredoxin-dependent glutamate synthase complement(954285..955808) Methylocella silvestris BL2 7093300 YP_002361200.1 CDS Msil_0868 NC_011666.1 955867 957276 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: bvi:Bcep1808_5516 cytochrome c biogenesis protein, transmembrane region; redoxin domain-containing protein complement(955867..957276) Methylocella silvestris BL2 7093301 YP_002361201.1 CDS Msil_0869 NC_011666.1 957554 958162 D PFAM: 2OG-Fe(II) oxygenase; KEGG: pzu:PHZ_c3220 DNA alkylation damage repair protein AlkB; 2OG-Fe(II) oxygenase 957554..958162 Methylocella silvestris BL2 7093302 YP_002361202.1 CDS Msil_0870 NC_011666.1 958288 958821 D this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 958288..958821 Methylocella silvestris BL2 7093303 YP_002361203.1 CDS Msil_0871 NC_011666.1 959174 959833 R PFAM: regulatory protein TetR; KEGG: rpc:RPC_2069 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(959174..959833) Methylocella silvestris BL2 7093304 YP_002361204.1 CDS Msil_0872 NC_011666.1 960054 960962 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: fal:FRAAL3688 putative zinc-binding dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 960054..960962 Methylocella silvestris BL2 7093305 YP_002361205.1 CDS Msil_0873 NC_011666.1 961011 962207 D PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_2068 major facilitator superfamily MFS_1; major facilitator superfamily protein 961011..962207 Methylocella silvestris BL2 7093306 YP_002361206.1 CDS Msil_0874 NC_011666.1 962816 964534 D KEGG: mex:Mext_0233 potassium-transporting ATPase, A subunit; TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: K transporting ATPase A subunit; potassium-transporting ATPase subunit A 962816..964534 Methylocella silvestris BL2 7093307 YP_002361207.1 CDS Msil_0875 NC_011666.1 964730 965044 D KEGG: bja:bsr6783 hypothetical protein; hypothetical protein 964730..965044 Methylocella silvestris BL2 7093308 YP_002361208.1 CDS Msil_0876 NC_011666.1 965152 965922 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rle:pRL120704 putative hydratase/decarboxylase; fumarylacetoacetate (FAA) hydrolase complement(965152..965922) Methylocella silvestris BL2 7093309 YP_002361209.1 CDS Msil_0877 NC_011666.1 966141 966668 R KEGG: sus:Acid_3387 hypothetical protein; hypothetical protein complement(966141..966668) Methylocella silvestris BL2 7093310 YP_002361210.1 CDS Msil_0878 NC_011666.1 966741 967001 R KEGG: azc:AZC_4518 hypothetical protein; hypothetical protein complement(966741..967001) Methylocella silvestris BL2 7093311 YP_002361211.1 CDS Msil_0879 NC_011666.1 967246 967632 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: rec:RHECIAT_CH0002462 putative glutathione-dependent formaldehyde-activating protein; glutathione-dependent formaldehyde-activating protein complement(967246..967632) Methylocella silvestris BL2 7093312 YP_002361212.1 CDS Msil_0880 NC_011666.1 967887 968504 R PFAM: Putative ParB-like nuclease; KEGG: mex:Mext_0727 putative ParB-like nuclease; Putative ParB-like nuclease complement(967887..968504) Methylocella silvestris BL2 7093313 YP_002361213.1 CDS Msil_0881 NC_011666.1 968835 969161 R KEGG: bid:Bind_0067 hypothetical protein; hypothetical protein complement(968835..969161) Methylocella silvestris BL2 7093314 YP_002361214.1 CDS Msil_0882 NC_011666.1 969593 970255 D KEGG: pde:Pden_1723 hypothetical protein; hypothetical protein 969593..970255 Methylocella silvestris BL2 7093315 YP_002361215.1 CDS Msil_0883 NC_011666.1 970473 970916 D PFAM: acylphosphatase; KEGG: rci:RCIX552 acylphosphatase; acylphosphatase 970473..970916 Methylocella silvestris BL2 7093316 YP_002361216.1 CDS Msil_0884 NC_011666.1 971051 971758 D KEGG: azc:AZC_2192 hypothetical protein; hypothetical protein 971051..971758 Methylocella silvestris BL2 7093317 YP_002361217.1 CDS Msil_0885 NC_011666.1 971824 972627 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rpt:Rpal_3674 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(971824..972627) Methylocella silvestris BL2 7093318 YP_002361218.1 CDS Msil_0886 NC_011666.1 972777 973472 D PFAM: O-methyltransferase family 3; KEGG: rpe:RPE_4704 O-methyltransferase, family 3; O-methyltransferase family protein 972777..973472 Methylocella silvestris BL2 7093319 YP_002361219.1 CDS Msil_0887 NC_011666.1 973716 973976 D hypothetical protein 973716..973976 Methylocella silvestris BL2 7093320 YP_002361220.1 CDS Msil_0888 NC_011666.1 974564 975283 D PFAM: porin; KEGG: bid:Bind_2294 porin; porin 974564..975283 Methylocella silvestris BL2 7093322 YP_002361221.1 CDS Msil_0889 NC_011666.1 975502 976266 D PFAM: porin; KEGG: bid:Bind_2294 porin; porin 975502..976266 Methylocella silvestris BL2 7093323 YP_002361222.1 CDS Msil_0890 NC_011666.1 976521 977288 D PFAM: OmpA domain protein transmembrane region-containing protein; porin; KEGG: bid:Bind_2294 porin; porin 976521..977288 Methylocella silvestris BL2 7093324 YP_002361223.1 CDS Msil_0891 NC_011666.1 977413 978786 D KEGG: bid:Bind_2295 MiaB-like tRNA modifying enzyme YliG; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 977413..978786 Methylocella silvestris BL2 7093325 YP_002361224.1 CDS Msil_0892 NC_011666.1 978800 980539 R PFAM: aminodeoxychorismate lyase; KEGG: bid:Bind_2296 aminodeoxychorismate lyase; aminodeoxychorismate lyase complement(978800..980539) Methylocella silvestris BL2 7093326 YP_002361225.1 CDS Msil_0893 NC_011666.1 980773 982032 R TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: bid:Bind_2297 3-oxoacyl-(acyl-carrier-protein) synthase 2; 3-oxoacyl-(acyl-carrier-protein) synthase 2 complement(980773..982032) Methylocella silvestris BL2 7093327 YP_002361226.1 CDS Msil_0894 NC_011666.1 982386 982625 R TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: bid:Bind_2298 acyl carrier protein; acyl carrier protein complement(982386..982625) Methylocella silvestris BL2 7093328 YP_002361227.1 CDS Msil_0895 NC_011666.1 982910 983647 R TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bid:Bind_2299 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase complement(982910..983647) Methylocella silvestris BL2 7093329 YP_002361228.1 CDS Msil_0896 NC_011666.1 983672 984631 R TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: bid:Bind_2300 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase complement(983672..984631) Methylocella silvestris BL2 7093330 YP_002361229.1 CDS Msil_0897 NC_011666.1 984875 985291 D KEGG: bid:Bind_2301 hypothetical protein; hypothetical protein 984875..985291 Methylocella silvestris BL2 7093331 YP_002361230.1 CDS rpsF NC_011666.1 985556 985996 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 985556..985996 Methylocella silvestris BL2 7093332 YP_002361231.1 CDS rpsR NC_011666.1 985996 986238 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 985996..986238 Methylocella silvestris BL2 7093333 YP_002361232.1 CDS Msil_0900 NC_011666.1 986390 987442 D KEGG: bid:Bind_2305 hypothetical protein; hypothetical protein 986390..987442 Methylocella silvestris BL2 7093334 YP_002361233.1 CDS rplI NC_011666.1 987483 988052 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 987483..988052 Methylocella silvestris BL2 7093335 YP_002361234.1 CDS Msil_0902 NC_011666.1 988179 988643 R KEGG: bid:Bind_1789 hypothetical protein; hypothetical protein complement(988179..988643) Methylocella silvestris BL2 7093336 YP_002361235.1 CDS Msil_0903 NC_011666.1 988640 989692 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bid:Bind_1790 enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase complement(988640..989692) Methylocella silvestris BL2 7093337 YP_002361236.1 CDS Msil_0904 NC_011666.1 989832 991277 R PFAM: Carbohydrate-selective porin OprB; KEGG: met:M446_4227 carbohydrate-selective porin OprB; carbohydrate-selective porin OprB complement(989832..991277) Methylocella silvestris BL2 7093338 YP_002361237.1 CDS Msil_0905 NC_011666.1 991620 992597 D KEGG: bxe:Bxe_B0586 hypothetical protein; hypothetical protein 991620..992597 Methylocella silvestris BL2 7093339 YP_002361238.1 CDS Msil_0906 NC_011666.1 992851 993258 D KEGG: ajs:Ajs_3444 hypothetical protein; hypothetical protein 992851..993258 Methylocella silvestris BL2 7093340 YP_002361239.1 CDS Msil_0907 NC_011666.1 993511 994083 R PFAM: Sel1 domain protein repeat-containing protein; KEGG: bja:bll6024 hypothetical protein; Sel1 domain-containing protein complement(993511..994083) Methylocella silvestris BL2 7093342 YP_002361240.1 CDS Msil_0908 NC_011666.1 994092 994700 R PFAM: peptidase A24A prepilin type IV; KEGG: rpc:RPC_3012 peptidase A24A, prepilin type IV; peptidase A24A prepilin type IV complement(994092..994700) Methylocella silvestris BL2 7093343 YP_002361241.1 CDS Msil_0909 NC_011666.1 994697 997114 R TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: xau:Xaut_2106 general secretion pathway protein D; general secretion pathway protein D complement(994697..997114) Methylocella silvestris BL2 7093344 YP_002361242.1 CDS Msil_0910 NC_011666.1 997311 998996 D PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: bja:bll6021 general secretion pathway protein E; type II secretion system protein E 997311..998996 Methylocella silvestris BL2 7093345 YP_002361243.1 CDS Msil_0911 NC_011666.1 999127 1000341 D PFAM: type II secretion system protein; KEGG: rpc:RPC_3008 type II secretion system protein; type II secretion system protein 999127..1000341 Methylocella silvestris BL2 7093346 YP_002361244.1 CDS Msil_0912 NC_011666.1 1000463 1000981 D TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: bra:BRADO6346 general secretion pathway protein G; general secretion pathway protein G 1000463..1000981 Methylocella silvestris BL2 7093347 YP_002361245.1 CDS Msil_0913 NC_011666.1 1000978 1001439 D KEGG: nha:Nham_0738 general secretion pathway protein H; general secretion pathway protein H 1000978..1001439 Methylocella silvestris BL2 7093348 YP_002361246.1 CDS Msil_0914 NC_011666.1 1001417 1001872 D KEGG: xau:Xaut_2111 general secretion pathway protein I; general secretion pathway protein I 1001417..1001872 Methylocella silvestris BL2 7093349 YP_002361247.1 CDS Msil_0915 NC_011666.1 1001869 1002633 D KEGG: nha:Nham_0736 putative general secretion pathway protein J; putative general secretion pathway protein J 1001869..1002633 Methylocella silvestris BL2 7093350 YP_002361248.1 CDS Msil_0916 NC_011666.1 1002645 1003526 D KEGG: bbt:BBta_2617 putative general secretion pathway protein K; putative general secretion pathway protein K 1002645..1003526 Methylocella silvestris BL2 7093351 YP_002361249.1 CDS Msil_0917 NC_011666.1 1003578 1004711 D PFAM: Fimbrial assembly family protein; KEGG: bja:bll6015 hypothetical protein; fimbrial assembly family protein 1003578..1004711 Methylocella silvestris BL2 7093352 YP_002361250.1 CDS Msil_0918 NC_011666.1 1004708 1005256 D KEGG: nha:Nham_0733 putative general secretion pathway protein M; putative general secretion pathway protein M 1004708..1005256 Methylocella silvestris BL2 7093353 YP_002361251.1 CDS Msil_0919 NC_011666.1 1005253 1005987 D KEGG: bra:BRADO6339 putative general secretion pathway protein N, GspN; hypothetical protein 1005253..1005987 Methylocella silvestris BL2 7093354 YP_002361252.1 CDS Msil_0921 NC_011666.1 1007384 1008568 R KEGG: bid:Bind_0271 TolA protein; TolA protein complement(1007384..1008568) Methylocella silvestris BL2 7093356 YP_002361253.1 CDS Msil_0922 NC_011666.1 1008574 1009020 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bid:Bind_0272 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(1008574..1009020) Methylocella silvestris BL2 7093357 YP_002361254.1 CDS Msil_0923 NC_011666.1 1009151 1009897 R TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: bid:Bind_0273 protein TolQ; protein TolQ complement(1009151..1009897) Methylocella silvestris BL2 7092326 YP_002361255.1 CDS Msil_0924 NC_011666.1 1010099 1010533 R TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: met:M446_1106 tol-pal system-associated acyl-CoA thioesterase; tol-pal system-associated acyl-CoA thioesterase complement(1010099..1010533) Methylocella silvestris BL2 7093603 YP_002361256.1 CDS gpsA NC_011666.1 1010691 1011707 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1010691..1011707 Methylocella silvestris BL2 7093604 YP_002361257.1 CDS Msil_0926 NC_011666.1 1011758 1012177 D PFAM: protein of unknown function DUF55; KEGG: bid:Bind_3218 protein of unknown function DUF55; hypothetical protein 1011758..1012177 Methylocella silvestris BL2 7093605 YP_002361258.1 CDS Msil_0927 NC_011666.1 1012340 1013455 D KEGG: aor:AO090011000131 hypothetical protein; hypothetical protein 1012340..1013455 Methylocella silvestris BL2 7093606 YP_002361259.1 CDS Msil_0928 NC_011666.1 1013522 1014643 R this protein has no known enzymatic function; beta-lactam binding protein AmpH complement(1013522..1014643) Methylocella silvestris BL2 7093607 YP_002361260.1 CDS Msil_0929 NC_011666.1 1014769 1015182 D KEGG: cph:Cpha266_1927 hypothetical protein; hypothetical protein 1014769..1015182 Methylocella silvestris BL2 7093608 YP_002361261.1 CDS Msil_0930 NC_011666.1 1015369 1015707 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: bid:Bind_1765 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 1015369..1015707 Methylocella silvestris BL2 7093609 YP_002361262.1 CDS Msil_0931 NC_011666.1 1015884 1017290 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(1015884..1017290) Methylocella silvestris BL2 7093610 YP_002361263.1 CDS Msil_0932 NC_011666.1 1017504 1017992 R KEGG: mrd:Mrad2831_0322 cupin 2 conserved barrel domain protein; cupin complement(1017504..1017992) Methylocella silvestris BL2 7093611 YP_002361264.1 CDS Msil_0933 NC_011666.1 1018117 1018542 R PFAM: OsmC family protein; KEGG: mex:Mext_2488 OsmC family protein; OsmC family protein complement(1018117..1018542) Methylocella silvestris BL2 7093612 YP_002361265.1 CDS Msil_0934 NC_011666.1 1018783 1020114 R PFAM: glycosyl transferase group 1; KEGG: bid:Bind_0590 glycosyl transferase group 1; group 1 glycosyl transferase complement(1018783..1020114) Methylocella silvestris BL2 7093613 YP_002361266.1 CDS Msil_0935 NC_011666.1 1020516 1021355 D PFAM: sulfotransferase; KEGG: cau:Caur_2114 sulfotransferase; sulfotransferase 1020516..1021355 Methylocella silvestris BL2 7093614 YP_002361267.1 CDS Msil_0936 NC_011666.1 1021474 1022391 D KEGG: bid:Bind_0592 hypothetical protein; hypothetical protein 1021474..1022391 Methylocella silvestris BL2 7093615 YP_002361268.1 CDS Msil_0937 NC_011666.1 1022403 1023545 D PFAM: permease YjgP/YjgQ family protein; KEGG: bid:Bind_0593 permease-like protein; YjgP/YjgQ family permease 1022403..1023545 Methylocella silvestris BL2 7093616 YP_002361269.1 CDS Msil_0938 NC_011666.1 1023542 1023940 D PFAM: regulatory protein LysR; KEGG: bid:Bind_0281 putative transcriptional regulator, ModE family; ModE family transcriptional regulator 1023542..1023940 Methylocella silvestris BL2 7093617 YP_002361270.1 CDS Msil_0939 NC_011666.1 1023974 1024738 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bid:Bind_0594 ABC transporter related; ABC transporter-like protein complement(1023974..1024738) Methylocella silvestris BL2 7093618 YP_002361271.1 CDS Msil_0940 NC_011666.1 1024728 1025531 R PFAM: ABC-2 type transporter; KEGG: bid:Bind_0595 ABC-2 type transporter; ABC-2 type transporter complement(1024728..1025531) Methylocella silvestris BL2 7093619 YP_002361272.1 CDS Msil_0941 NC_011666.1 1025745 1025939 D PFAM: CsbD family protein; KEGG: mrd:Mrad2831_5653 CsbD family protein; CsbD family protein 1025745..1025939 Methylocella silvestris BL2 7093620 YP_002361273.1 CDS Msil_0942 NC_011666.1 1026005 1026751 R KEGG: neu:NE2508 hypothetical protein; hypothetical protein complement(1026005..1026751) Methylocella silvestris BL2 7093621 YP_002361274.1 CDS Msil_0943 NC_011666.1 1027070 1027933 D PFAM: dienelactone hydrolase; KEGG: bja:bll6841 putative carboxymethylenebutenolidase; carboxymethylenebutenolidase 1027070..1027933 Methylocella silvestris BL2 7093622 YP_002361275.1 CDS Msil_0944 NC_011666.1 1028181 1029344 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cbd:CBUD_1194 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1028181..1029344 Methylocella silvestris BL2 7093623 YP_002361276.1 CDS Msil_0945 NC_011666.1 1029347 1032469 D PFAM: acriflavin resistance protein; KEGG: bra:BRADO2502 RND family multidrug efflux protein; acriflavin resistance protein 1029347..1032469 Methylocella silvestris BL2 7093624 YP_002361277.1 CDS Msil_0946 NC_011666.1 1032586 1032993 D PFAM: Thioredoxin domain; KEGG: mrd:Mrad2831_2976 thioredoxin domain protein; thioredoxin domain-containing protein 1032586..1032993 Methylocella silvestris BL2 7093625 YP_002361278.1 CDS Msil_0947 NC_011666.1 1032990 1033709 D PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: mpo:Mpop_0211 cytochrome c biogenesis protein transmembrane region; cytochrome c biogenesis protein transmembrane subunit 1032990..1033709 Methylocella silvestris BL2 7093626 YP_002361279.1 CDS Msil_0948 NC_011666.1 1033731 1034153 D KEGG: jan:Jann_2418 hypothetical protein; hypothetical protein 1033731..1034153 Methylocella silvestris BL2 7093627 YP_002361280.1 CDS Msil_0949 NC_011666.1 1034138 1035358 R PFAM: major facilitator superfamily MFS_1; KEGG: met:M446_4932 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(1034138..1035358) Methylocella silvestris BL2 7093628 YP_002361281.1 CDS Msil_0950 NC_011666.1 1035423 1036040 R PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bid:Bind_0116 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(1035423..1036040) Methylocella silvestris BL2 7093629 YP_002361282.1 CDS Msil_0951 NC_011666.1 1036244 1037062 D PFAM: metallophosphoesterase; KEGG: bid:Bind_0115 metallophosphoesterase; metallophosphoesterase 1036244..1037062 Methylocella silvestris BL2 7093630 YP_002361283.1 CDS Msil_0952 NC_011666.1 1037062 1038099 D PFAM: glycosyl transferase group 1; KEGG: bid:Bind_0114 glycosyl transferase group 1; group 1 glycosyl transferase 1037062..1038099 Methylocella silvestris BL2 7093631 YP_002361284.1 CDS Msil_0953 NC_011666.1 1038283 1039302 D PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; KEGG: bid:Bind_0111 2-alkenal reductase; peptidase S1 and S6 chymotrypsin/Hap 1038283..1039302 Methylocella silvestris BL2 7093632 YP_002361285.1 CDS Msil_0954 NC_011666.1 1039637 1041121 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bid:Bind_0106 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 1039637..1041121 Methylocella silvestris BL2 7093633 YP_002361286.1 CDS Msil_0955 NC_011666.1 1041423 1043831 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bid:Bind_0305 TonB-dependent receptor; TonB-dependent receptor 1041423..1043831 Methylocella silvestris BL2 7093634 YP_002361287.1 CDS Msil_0956 NC_011666.1 1043934 1044332 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpe:RPE_1625 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(1043934..1044332) Methylocella silvestris BL2 7093635 YP_002361288.1 CDS Msil_0957 NC_011666.1 1044511 1045149 R PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: bid:Bind_0872 transglutaminase family protein cysteine peptidase BTLCP; transglutaminase complement(1044511..1045149) Methylocella silvestris BL2 7093636 YP_002361289.1 CDS Msil_0958 NC_011666.1 1045515 1046357 D KEGG: bid:Bind_0871 hypothetical protein; hypothetical protein 1045515..1046357 Methylocella silvestris BL2 7093637 YP_002361290.1 CDS Msil_0959 NC_011666.1 1046475 1047023 D KEGG: bid:Bind_0870 hypothetical protein; hypothetical protein 1046475..1047023 Methylocella silvestris BL2 7093638 YP_002361291.1 CDS Msil_0960 NC_011666.1 1047008 1047730 R KEGG: bid:Bind_1298 chromosomal replication initiator DnaA; chromosomal replication initiator DnaA complement(1047008..1047730) Methylocella silvestris BL2 7093639 YP_002361292.1 CDS Msil_0961 NC_011666.1 1047732 1048880 R PFAM: protein of unknown function UPF0118; KEGG: bid:Bind_1297 protein of unknown function UPF0118; hypothetical protein complement(1047732..1048880) Methylocella silvestris BL2 7093640 YP_002361293.1 CDS Msil_0962 NC_011666.1 1048973 1049521 R PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bid:Bind_1296 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase complement(1048973..1049521) Methylocella silvestris BL2 7093641 YP_002361294.1 CDS Msil_0963 NC_011666.1 1049684 1050745 D KEGG: met:M446_5164 phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; phosphoribosylformylglycinamidine cyclo-ligase 1049684..1050745 Methylocella silvestris BL2 7093642 YP_002361295.1 CDS Msil_0964 NC_011666.1 1050759 1051415 D TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: bid:Bind_1292 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 1050759..1051415 Methylocella silvestris BL2 7093643 YP_002361296.1 CDS Msil_0965 NC_011666.1 1051429 1051734 R KEGG: mfa:Mfla_1179 hypothetical protein; hypothetical protein complement(1051429..1051734) Methylocella silvestris BL2 7093644 YP_002361297.1 CDS Msil_0966 NC_011666.1 1051796 1052860 D PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: neu:NE2511 AraC family transcription regulator; AraC family transcriptional regulator 1051796..1052860 Methylocella silvestris BL2 7093645 YP_002361298.1 CDS Msil_0967 NC_011666.1 1052928 1053872 D KEGG: bid:Bind_2438 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter periplasmic substrate-binding protein 1052928..1053872 Methylocella silvestris BL2 7093646 YP_002361299.1 CDS ndk NC_011666.1 1053928 1054350 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(1053928..1054350) Methylocella silvestris BL2 7093647 YP_002361300.1 CDS Msil_0969 NC_011666.1 1054489 1055406 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bid:Bind_2432 transcriptional regulator, LysR family; LysR family transcriptional regulator 1054489..1055406 Methylocella silvestris BL2 7093648 YP_002361301.1 CDS Msil_0970 NC_011666.1 1055493 1056029 R TIGRFAM: alkylhydroperoxidase, AhpD family; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bid:Bind_2431 alkylhydroperoxidase, AhpD family; alkylhydroperoxidase complement(1055493..1056029) Methylocella silvestris BL2 7093649 YP_002361302.1 CDS Msil_0971 NC_011666.1 1056029 1056583 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bid:Bind_2430 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase complement(1056029..1056583) Methylocella silvestris BL2 7093650 YP_002361303.1 CDS Msil_0972 NC_011666.1 1056981 1058861 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bid:Bind_2428 ABC transporter related; ABC transporter-like protein 1056981..1058861 Methylocella silvestris BL2 7093651 YP_002361304.1 CDS Msil_0973 NC_011666.1 1058903 1059415 R KEGG: bid:Bind_1377 hypothetical protein; hypothetical protein complement(1058903..1059415) Methylocella silvestris BL2 7093652 YP_002361305.1 CDS Msil_0974 NC_011666.1 1059485 1059709 R hypothetical protein complement(1059485..1059709) Methylocella silvestris BL2 7093653 YP_002361306.1 CDS Msil_0975 NC_011666.1 1059838 1060233 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(1059838..1060233) Methylocella silvestris BL2 7093654 YP_002361307.1 CDS Msil_0976 NC_011666.1 1060295 1061575 R TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mpo:Mpop_2966 molybdenum cofactor synthesis domain protein; molybdenum cofactor synthesis domain-containing protein complement(1060295..1061575) Methylocella silvestris BL2 7093655 YP_002361308.1 CDS Msil_0977 NC_011666.1 1061572 1062120 R TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: bbr:BB2113 molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein B complement(1061572..1062120) Methylocella silvestris BL2 7093656 YP_002361309.1 CDS Msil_0978 NC_011666.1 1062253 1062495 D PFAM: SirA family protein; KEGG: bid:Bind_3548 SirA family protein; SirA family protein 1062253..1062495 Methylocella silvestris BL2 7093657 YP_002361310.1 CDS Msil_0979 NC_011666.1 1062492 1063061 D KEGG: rru:Rru_A0135 molybdenum ABC transporter ATP-binding protein; molybdenum ABC transporter ATP-binding protein 1062492..1063061 Methylocella silvestris BL2 7093658 YP_002361311.1 CDS Msil_0980 NC_011666.1 1063058 1063786 D KEGG: bid:Bind_0671 NUDIX hydrolase; NUDIX hydrolase 1063058..1063786 Methylocella silvestris BL2 7093659 YP_002361312.1 CDS Msil_0981 NC_011666.1 1063783 1064145 R KEGG: bid:Bind_0670 hypothetical protein; hypothetical protein complement(1063783..1064145) Methylocella silvestris BL2 7093660 YP_002361313.1 CDS Msil_0982 NC_011666.1 1064196 1065395 R PFAM: monooxygenase FAD-binding; KEGG: bid:Bind_0923 monooxygenase FAD-binding; monooxygenase complement(1064196..1065395) Methylocella silvestris BL2 7093661 YP_002361314.1 CDS Msil_0983 NC_011666.1 1065418 1065672 R KEGG: bid:Bind_0924 hypothetical protein; hypothetical protein complement(1065418..1065672) Methylocella silvestris BL2 7093662 YP_002361315.1 CDS Msil_0984 NC_011666.1 1065740 1066951 R PFAM: glycosyl transferase group 1; KEGG: chu:CHU_0894 A-glycosyltransferase; group 1 glycosyl transferase complement(1065740..1066951) Methylocella silvestris BL2 7093663 YP_002361316.1 CDS Msil_0985 NC_011666.1 1067298 1068338 R KEGG: amr:AM1_0382 hypothetical protein; hypothetical protein complement(1067298..1068338) Methylocella silvestris BL2 7093664 YP_002361317.1 CDS Msil_0986 NC_011666.1 1068466 1069035 R TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase central region; KEGG: bid:Bind_1030 histidinol-phosphate phosphatase family protein; histidinol-phosphate phosphatase family protein complement(1068466..1069035) Methylocella silvestris BL2 7093665 YP_002361318.1 CDS Msil_0987 NC_011666.1 1069121 1070266 R PFAM: glycosyl transferase family 9; KEGG: gme:Gmet_2345 lipopolysaccharide heptosyltransferase II; glycosyl transferase family protein complement(1069121..1070266) Methylocella silvestris BL2 7093666 YP_002361319.1 CDS gmk NC_011666.1 1070848 1071552 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(1070848..1071552) Methylocella silvestris BL2 7093667 YP_002361320.1 CDS Msil_0989 NC_011666.1 1071557 1072441 R PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: bid:Bind_1291 protein of unknown function DUF1732; YicC domain-containing protein complement(1071557..1072441) Methylocella silvestris BL2 7093668 YP_002361321.1 CDS Msil_0990 NC_011666.1 1072541 1073473 R TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: bid:Bind_2440 GTP-binding protein Era; GTP-binding protein Era complement(1072541..1073473) Methylocella silvestris BL2 7093669 YP_002361322.1 CDS Msil_0991 NC_011666.1 1073470 1074177 R PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: bid:Bind_2441 ribonuclease III; Ribonuclease III complement(1073470..1074177) Methylocella silvestris BL2 7093670 YP_002361323.1 CDS Msil_0992 NC_011666.1 1074180 1074971 R KEGG: bid:Bind_2442 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I complement(1074180..1074971) Methylocella silvestris BL2 7093671 YP_002361324.1 CDS Msil_0993 NC_011666.1 1075264 1075701 R KEGG: bid:Bind_2443 holo-acyl-carrier-protein synthase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; holo-acyl-carrier-protein synthase complement(1075264..1075701) Methylocella silvestris BL2 7093672 YP_002361325.1 CDS Msil_0994 NC_011666.1 1075698 1076477 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(1075698..1076477) Methylocella silvestris BL2 7093673 YP_002361326.1 CDS Msil_0995 NC_011666.1 1076568 1077350 R PFAM: pentapeptide repeat protein; KEGG: bja:blr6202 hypothetical protein; pentapeptide repeat-containing protein complement(1076568..1077350) Methylocella silvestris BL2 7093674 YP_002361327.1 CDS Msil_0996 NC_011666.1 1077616 1078416 D KEGG: ddsi:GD20599-PA.; hypothetical protein 1077616..1078416 Methylocella silvestris BL2 7093675 YP_002361328.1 CDS Msil_0997 NC_011666.1 1078563 1079456 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: abc:ACICU_00110 TPR repeat, SEL1 subfamily protein; Sel1 domain-containing protein 1078563..1079456 Methylocella silvestris BL2 7093676 YP_002361329.1 CDS Msil_0998 NC_011666.1 1079466 1081676 R KEGG: bid:Bind_2445 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA complement(1079466..1081676) Methylocella silvestris BL2 7093677 YP_002361330.1 CDS Msil_0999 NC_011666.1 1081988 1082377 R Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(1081988..1082377) Methylocella silvestris BL2 7093678 YP_002361331.1 CDS Msil_1000 NC_011666.1 1082752 1083369 D PFAM: protein of unknown function DUF88; KEGG: bid:Bind_2447 protein of unknown function DUF88; hypothetical protein 1082752..1083369 Methylocella silvestris BL2 7093679 YP_002361332.1 CDS Msil_1001 NC_011666.1 1083402 1084088 D PFAM: Uracil-DNA glycosylase superfamily; KEGG: bid:Bind_2448 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase superfamily protein 1083402..1084088 Methylocella silvestris BL2 7093680 YP_002361333.1 CDS Msil_1002 NC_011666.1 1084092 1088168 R TIGRFAM: amino acid adenylation domain protein; non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; transferase hexapeptide repeat containing protein; KEGG: bid:Bind_1102 non-ribosomal peptide synthetase; non-ribosomal peptide synthetase complement(1084092..1088168) Methylocella silvestris BL2 7093681 YP_002361334.1 CDS Msil_1003 NC_011666.1 1088460 1089308 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_1103 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1088460..1089308) Methylocella silvestris BL2 7093682 YP_002361335.1 CDS Msil_1004 NC_011666.1 1089661 1090161 D PFAM: Sigma-70 region 4 type 2; KEGG: bid:Bind_1104 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 1089661..1090161 Methylocella silvestris BL2 7093683 YP_002361336.1 CDS Msil_1005 NC_011666.1 1090172 1091095 D KEGG: bid:Bind_1105 putative transmembrane anti-sigma factor; putative transmembrane anti-sigma factor 1090172..1091095 Methylocella silvestris BL2 7091833 YP_002361337.1 CDS Msil_1006 NC_011666.1 1091108 1093012 R KEGG: bja:bll7051 hypothetical protein; hypothetical protein complement(1091108..1093012) Methylocella silvestris BL2 7091834 YP_002361338.1 CDS Msil_1007 NC_011666.1 1093258 1094553 R PFAM: adenylosuccinate synthetase; KEGG: bid:Bind_0262 adenylosuccinate synthase; Adenylosuccinate synthase complement(1093258..1094553) Methylocella silvestris BL2 7091835 YP_002361339.1 CDS Msil_1008 NC_011666.1 1095052 1095282 D PFAM: ribosomal protein L31; KEGG: bid:Bind_0261 ribosomal protein L31; 50S ribosomal protein L31 1095052..1095282 Methylocella silvestris BL2 7091836 YP_002361340.1 CDS Msil_1009 NC_011666.1 1095568 1096950 D PFAM: major facilitator superfamily MFS_1; KEGG: ace:Acel_1959 drug resistance transporter, EmrB/QacA subfamily; major facilitator superfamily protein 1095568..1096950 Methylocella silvestris BL2 7091837 YP_002361341.1 CDS Msil_1010 NC_011666.1 1096978 1097517 R PFAM: protein of unknown function DUF1465; KEGG: bid:Bind_3249 protein of unknown function DUF1465; hypothetical protein complement(1096978..1097517) Methylocella silvestris BL2 7091838 YP_002361342.1 CDS Msil_1011 NC_011666.1 1097786 1098592 D KEGG: bid:Bind_3213 hypothetical protein; hypothetical protein 1097786..1098592 Methylocella silvestris BL2 7091839 YP_002361343.1 CDS Msil_1012 NC_011666.1 1099116 1099991 D PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bid:Bind_3102 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase 1099116..1099991 Methylocella silvestris BL2 7091840 YP_002361344.1 CDS Msil_1013 NC_011666.1 1100172 1100741 D PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: bid:Bind_3103 HNH endonuclease; HNH endonuclease 1100172..1100741 Methylocella silvestris BL2 7091841 YP_002361345.1 CDS Msil_1014 NC_011666.1 1100757 1101938 R TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bid:Bind_1040 acetylornithine deacetylase (ArgE); acetylornithine deacetylase ArgE complement(1100757..1101938) Methylocella silvestris BL2 7091842 YP_002361346.1 CDS Msil_1015 NC_011666.1 1101996 1102388 R PFAM: ApaG domain protein; KEGG: bid:Bind_1039 ApaG domain protein; ApaG domain-containing protein complement(1101996..1102388) Methylocella silvestris BL2 7091843 YP_002361347.1 CDS Msil_1016 NC_011666.1 1102480 1103700 R KEGG: bid:Bind_1038 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-succinylhomoserine sulfhydrylase complement(1102480..1103700) Methylocella silvestris BL2 7091844 YP_002361348.1 CDS Msil_1017 NC_011666.1 1103844 1105004 D Catalyzes the deamination of dCTP to form dUTP; 2'-deoxycytidine 5'-triphosphate deaminase 1103844..1105004 Methylocella silvestris BL2 7091845 YP_002361349.1 CDS Msil_1018 NC_011666.1 1105281 1106747 R KEGG: mva:Mvan_1693 hypothetical protein; hypothetical protein complement(1105281..1106747) Methylocella silvestris BL2 7091846 YP_002361350.1 CDS Msil_1019 NC_011666.1 1106725 1106955 R hypothetical protein complement(1106725..1106955) Methylocella silvestris BL2 7091847 YP_002361351.1 CDS Msil_1020 NC_011666.1 1107179 1107754 D PFAM: cytochrome B561; KEGG: mrd:Mrad2831_0761 cytochrome b561; cytochrome B561 1107179..1107754 Methylocella silvestris BL2 7091848 YP_002361352.1 CDS Msil_1021 NC_011666.1 1107758 1108924 R dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase complement(1107758..1108924) Methylocella silvestris BL2 7091849 YP_002361353.1 CDS Msil_1022 NC_011666.1 1109270 1109737 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 1109270..1109737 Methylocella silvestris BL2 7091850 YP_002361354.1 CDS Msil_1023 NC_011666.1 1109882 1111066 D KEGG: bid:Bind_0573 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; homoserine O-acetyltransferase 1109882..1111066 Methylocella silvestris BL2 7091851 YP_002361355.1 CDS Msil_1024 NC_011666.1 1111063 1111707 D TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: bid:Bind_0574 methionine biosynthesis protein MetW; methionine biosynthesis protein MetW 1111063..1111707 Methylocella silvestris BL2 7091852 YP_002361356.1 CDS Msil_1025 NC_011666.1 1111785 1112324 R PFAM: Inorganic pyrophosphatase; KEGG: bid:Bind_0583 inorganic diphosphatase; inorganic diphosphatase complement(1111785..1112324) Methylocella silvestris BL2 7091853 YP_002361357.1 CDS Msil_1026 NC_011666.1 1112662 1113168 R PFAM: GCN5-related N-acetyltransferase; KEGG: bid:Bind_0584 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1112662..1113168) Methylocella silvestris BL2 7091854 YP_002361358.1 CDS Msil_1027 NC_011666.1 1113281 1114549 R KEGG: bid:Bind_0585 hypothetical protein; hypothetical protein complement(1113281..1114549) Methylocella silvestris BL2 7091855 YP_002361359.1 CDS Msil_1028 NC_011666.1 1114724 1115404 R PFAM: CBS domain containing protein; transport-associated; KEGG: bac:BamMC406_6220 putative signal-transduction protein with CBS domains; hypothetical protein complement(1114724..1115404) Methylocella silvestris BL2 7091856 YP_002361360.1 CDS Msil_1029 NC_011666.1 1115633 1115899 D KEGG: rpt:Rpal_4026 hypothetical protein; hypothetical protein 1115633..1115899 Methylocella silvestris BL2 7091857 YP_002361361.1 CDS Msil_1030 NC_011666.1 1116280 1116489 D hypothetical protein 1116280..1116489 Methylocella silvestris BL2 7091858 YP_002361362.1 CDS Msil_1031 NC_011666.1 1116517 1117554 R KEGG: bid:Bind_3479 hypothetical protein; hypothetical protein complement(1116517..1117554) Methylocella silvestris BL2 7091859 YP_002361363.1 CDS Msil_1032 NC_011666.1 1117789 1118304 D KEGG: bja:blr7315 hypothetical protein; hypothetical protein 1117789..1118304 Methylocella silvestris BL2 7091860 YP_002361364.1 CDS Msil_1033 NC_011666.1 1118297 1118584 D KEGG: bja:bsr7316 hypothetical protein; hypothetical protein 1118297..1118584 Methylocella silvestris BL2 7091861 YP_002361365.1 CDS Msil_1034 NC_011666.1 1118581 1118904 D subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit G 1118581..1118904 Methylocella silvestris BL2 7091862 YP_002361366.1 CDS Msil_1035 NC_011666.1 1118901 1119842 D KEGG: bja:blr7318 hypothetical protein; hypothetical protein 1118901..1119842 Methylocella silvestris BL2 7091863 YP_002361367.1 CDS Msil_1036 NC_011666.1 1119839 1120177 D PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: bja:blr7319 hypothetical protein; NADH-ubiquinone oxidoreductase chain 4L 1119839..1120177 Methylocella silvestris BL2 7091864 YP_002361368.1 CDS Msil_1037 NC_011666.1 1120184 1121677 D PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: bja:blr7320 hypothetical protein; NADH dehydrogenase (quinone) 1120184..1121677 Methylocella silvestris BL2 7091865 YP_002361369.1 CDS Msil_1038 NC_011666.1 1121674 1123308 D PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: xau:Xaut_1581 NADH/ubiquinone/plastoquinone (complex I); NADH/ubiquinone/plastoquinone 1121674..1123308 Methylocella silvestris BL2 7091866 YP_002361370.1 CDS Msil_1039 NC_011666.1 1123374 1123625 D PFAM: plasmid stabilization system; KEGG: bid:Bind_2414 plasmid stabilization system; plasmid stabilization system 1123374..1123625 Methylocella silvestris BL2 7091867 YP_002361371.1 CDS Msil_1040 NC_011666.1 1123627 1124040 D PFAM: helix-turn-helix domain protein; KEGG: bid:Bind_2413 helix-turn-helix domain protein; XRE family transcriptional regulator 1123627..1124040 Methylocella silvestris BL2 7091868 YP_002361372.1 CDS Msil_1041 NC_011666.1 1124066 1125283 R PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: bms:BR0328 putative lipoprotein; hypothetical protein complement(1124066..1125283) Methylocella silvestris BL2 7091869 YP_002361373.1 CDS Msil_1042 NC_011666.1 1125433 1126896 D KEGG: bid:Bind_0015 hypothetical protein; hypothetical protein 1125433..1126896 Methylocella silvestris BL2 7091870 YP_002361374.1 CDS Msil_1043 NC_011666.1 1127000 1127563 R PFAM: membrane protein of uknown function UCP014873; KEGG: bid:Bind_3618 membrane protein of uknown function UCP014873; membrane protein complement(1127000..1127563) Methylocella silvestris BL2 7091871 YP_002361375.1 CDS Msil_1044 NC_011666.1 1127674 1128711 D PFAM: protein of unknown function UPF0118; KEGG: bid:Bind_3619 protein of unknown function UPF0118; hypothetical protein 1127674..1128711 Methylocella silvestris BL2 7091872 YP_002361376.1 CDS Msil_1045 NC_011666.1 1128851 1129891 D PFAM: Patatin; KEGG: azc:AZC_1304 putative esterase; patatin 1128851..1129891 Methylocella silvestris BL2 7091873 YP_002361377.1 CDS Msil_1046 NC_011666.1 1130137 1131486 D KEGG: fph:Fphi_0315 hypothetical protein; hypothetical protein 1130137..1131486 Methylocella silvestris BL2 7091874 YP_002361378.1 CDS Msil_1047 NC_011666.1 1131787 1134852 R PFAM: acriflavin resistance protein; KEGG: bid:Bind_1393 acriflavin resistance protein; acriflavin resistance protein complement(1131787..1134852) Methylocella silvestris BL2 7091875 YP_002361379.1 CDS Msil_1048 NC_011666.1 1134849 1135952 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bid:Bind_1392 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(1134849..1135952) Methylocella silvestris BL2 7091876 YP_002361380.1 CDS Msil_1049 NC_011666.1 1136128 1137180 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mlo:mlr6727 transcriptional regulator; AraC family transcriptional regulator complement(1136128..1137180) Methylocella silvestris BL2 7091877 YP_002361381.1 CDS Msil_1050 NC_011666.1 1137354 1138550 D PFAM: sodium/glutamate symporter; KEGG: xau:Xaut_0831 sodium/glutamate symporter; sodium/glutamate symporter 1137354..1138550 Methylocella silvestris BL2 7091878 YP_002361382.1 CDS Msil_1051 NC_011666.1 1139753 1141177 R KEGG: gbe:GbCGDNIH1_0532 pyridine nucleotide-disulfide oxidoreductase family; pyridine nucleotide-disulfide oxidoreductase family complement(1139753..1141177) Methylocella silvestris BL2 7091879 YP_002361383.1 CDS Msil_1052 NC_011666.1 1141638 1141874 R PFAM: protein of unknown function DUF1467; KEGG: bid:Bind_1782 protein of unknown function DUF1467; hypothetical protein complement(1141638..1141874) Methylocella silvestris BL2 7091881 YP_002361384.1 CDS Msil_1053 NC_011666.1 1142176 1142763 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bid:Bind_1783 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 1142176..1142763 Methylocella silvestris BL2 7091882 YP_002361385.1 CDS Msil_1054 NC_011666.1 1142782 1143180 R PFAM: protein of unknown function DUF971; KEGG: bid:Bind_1784 protein of unknown function DUF971; hypothetical protein complement(1142782..1143180) Methylocella silvestris BL2 7091883 YP_002361386.1 CDS Msil_1055 NC_011666.1 1143248 1144291 D KEGG: bid:Bind_1785 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 1143248..1144291 Methylocella silvestris BL2 7091884 YP_002361387.1 CDS Msil_1056 NC_011666.1 1144590 1144802 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: xau:Xaut_1556 cold-shock DNA-binding domain-containing protein; cold-shock DNA-binding domain-containing protein 1144590..1144802 Methylocella silvestris BL2 7091885 YP_002361388.1 CDS Msil_1057 NC_011666.1 1145061 1145192 D hypothetical protein 1145061..1145192 Methylocella silvestris BL2 7091886 YP_002361389.1 CDS Msil_1058 NC_011666.1 1145335 1145640 D hypothetical protein 1145335..1145640 Methylocella silvestris BL2 7091887 YP_002361390.1 CDS Msil_1059 NC_011666.1 1145693 1146640 D KEGG: bja:bll5145 mannose-6-phosphate isomerase; mannose-6-phosphate isomerase 1145693..1146640 Methylocella silvestris BL2 7091888 YP_002361391.1 CDS Msil_1060 NC_011666.1 1146637 1149006 D PFAM: glycosyl transferase group 1; KEGG: rru:Rru_A0925 glycosyl transferase, group 1; group 1 glycosyl transferase 1146637..1149006 Methylocella silvestris BL2 7091889 YP_002361392.1 CDS Msil_1061 NC_011666.1 1148957 1150258 D PFAM: glycosidase PH1107-related; KEGG: bja:bll5143 hypothetical protein; glycosidase PH1107-like protein 1148957..1150258 Methylocella silvestris BL2 7091890 YP_002361393.1 CDS Msil_1062 NC_011666.1 1150406 1150570 D KEGG: bid:Bind_0738 hypothetical protein; hypothetical protein 1150406..1150570 Methylocella silvestris BL2 7091891 YP_002361394.1 CDS Msil_1063 NC_011666.1 1150661 1151737 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold-4 domain protein; KEGG: mlo:mlr1749 sensory transduction regulatory protein; signal transduction histidine kinase complement(1150661..1151737) Methylocella silvestris BL2 7091892 YP_002361395.1 CDS Msil_1064 NC_011666.1 1151913 1152059 R hypothetical protein complement(1151913..1152059) Methylocella silvestris BL2 7091893 YP_002361396.1 CDS Msil_1065 NC_011666.1 1152086 1152370 R PFAM: transglycosylase-associated protein; KEGG: rpe:RPE_3012 transglycosylase-associated protein; transglycosylase-associated protein complement(1152086..1152370) Methylocella silvestris BL2 7091894 YP_002361397.1 CDS Msil_1066 NC_011666.1 1152400 1153494 R KEGG: bid:Bind_1786 nucleotide-binding protein-like protein; hypothetical protein complement(1152400..1153494) Methylocella silvestris BL2 7091895 YP_002361398.1 CDS Msil_1067 NC_011666.1 1153669 1154553 D PFAM: extracellular solute-binding protein family 3; KEGG: bid:Bind_1787 extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 1153669..1154553 Methylocella silvestris BL2 7091896 YP_002361399.1 CDS Msil_1068 NC_011666.1 1154737 1155603 D PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rpc:RPC_2065 3-hydroxyisobutyrate dehydrogenase; 6-phosphogluconate dehydrogenase 1154737..1155603 Methylocella silvestris BL2 7091897 YP_002361400.1 CDS Msil_1069 NC_011666.1 1155747 1156037 D PFAM: transglycosylase-associated protein; KEGG: bid:Bind_0892 hypothetical protein; transglycosylase-associated protein 1155747..1156037 Methylocella silvestris BL2 7091898 YP_002361401.1 CDS Msil_1070 NC_011666.1 1156421 1156615 D hypothetical protein 1156421..1156615 Methylocella silvestris BL2 7091899 YP_002361402.1 CDS Msil_1071 NC_011666.1 1156921 1160358 R KEGG: pla:Plav_2531 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; DNA polymerase III subunit alpha complement(1156921..1160358) Methylocella silvestris BL2 7091900 YP_002361403.1 CDS Msil_1072 NC_011666.1 1160355 1161821 R KEGG: xau:Xaut_3469 hypothetical protein; hypothetical protein complement(1160355..1161821) Methylocella silvestris BL2 7091901 YP_002361404.1 CDS Msil_1073 NC_011666.1 1161913 1162866 R KEGG: xau:Xaut_3470 hypothetical protein; hypothetical protein complement(1161913..1162866) Methylocella silvestris BL2 7091902 YP_002361405.1 CDS Msil_1074 NC_011666.1 1163048 1163908 R PFAM: peptidase C15 pyroglutamyl peptidase I; KEGG: bid:Bind_1658 peptidase C15 pyroglutamyl peptidase I; peptidase C15 pyroglutamyl peptidase I complement(1163048..1163908) Methylocella silvestris BL2 7091903 YP_002361406.1 CDS Msil_1075 NC_011666.1 1164268 1165515 D PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: bid:Bind_1657 protein of unknown function DUF900 hydrolase family protein; hypothetical protein 1164268..1165515 Methylocella silvestris BL2 7091904 YP_002361407.1 CDS Msil_1076 NC_011666.1 1165971 1166273 D KEGG: bid:Bind_1975 hypothetical protein; hypothetical protein 1165971..1166273 Methylocella silvestris BL2 7091905 YP_002361408.1 CDS Msil_1077 NC_011666.1 1166555 1167346 R PFAM: phosphoadenosine phosphosulfate reductase; KEGG: bid:Bind_2262 phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase complement(1166555..1167346) Methylocella silvestris BL2 7091906 YP_002361409.1 CDS Msil_1078 NC_011666.1 1167609 1168454 D TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bid:Bind_2259 sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit CysT 1167609..1168454 Methylocella silvestris BL2 7091907 YP_002361410.1 CDS Msil_1079 NC_011666.1 1168492 1169370 D TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bid:Bind_2258 sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit CysW 1168492..1169370 Methylocella silvestris BL2 7091908 YP_002361411.1 CDS Msil_1080 NC_011666.1 1169429 1170520 D KEGG: bid:Bind_2257 sulfate ABC transporter, ATPase subunit; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter ATPase 1169429..1170520 Methylocella silvestris BL2 7091909 YP_002361412.1 CDS Msil_1081 NC_011666.1 1170637 1171290 D KEGG: mrd:Mrad2831_3914 SNARE associated Golgi protein; hypothetical protein 1170637..1171290 Methylocella silvestris BL2 7091910 YP_002361413.1 CDS Msil_1082 NC_011666.1 1171326 1171943 D PFAM: SNARE associated Golgi protein; KEGG: bid:Bind_2255 SNARE associated Golgi protein; hypothetical protein 1171326..1171943 Methylocella silvestris BL2 7091911 YP_002361414.1 CDS Msil_1083 NC_011666.1 1172008 1172295 D KEGG: mpo:Mpop_0939 hypothetical protein; hypothetical protein 1172008..1172295 Methylocella silvestris BL2 7091912 YP_002361415.1 CDS Msil_1084 NC_011666.1 1172358 1173266 D PFAM: beta-lactamase domain protein; KEGG: mex:Mext_2901 beta-lactamase domain protein; beta-lactamase domain-containing protein 1172358..1173266 Methylocella silvestris BL2 7091913 YP_002361416.1 CDS Msil_1085 NC_011666.1 1173273 1174046 R PFAM: protein of unknown function DUF1499; KEGG: met:M446_2732 hypothetical protein; hypothetical protein complement(1173273..1174046) Methylocella silvestris BL2 7093766 YP_002361417.1 CDS Msil_1086 NC_011666.1 1174147 1175121 R PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: bid:Bind_1106 chaperone DnaJ domain protein; chaperone DnaJ domain-containing protein complement(1174147..1175121) Methylocella silvestris BL2 7093848 YP_002361418.1 CDS Msil_1087 NC_011666.1 1175293 1175802 R KEGG: bid:Bind_1107 hypothetical protein; hypothetical protein complement(1175293..1175802) Methylocella silvestris BL2 7093849 YP_002361419.1 CDS Msil_1088 NC_011666.1 1175977 1176591 D KEGG: bid:Bind_1108 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase 1175977..1176591 Methylocella silvestris BL2 7093850 YP_002361420.1 CDS Msil_1089 NC_011666.1 1176603 1177070 D PFAM: NUDIX hydrolase; KEGG: bid:Bind_0716 NUDIX hydrolase; NUDIX hydrolase 1176603..1177070 Methylocella silvestris BL2 7093851 YP_002361421.1 CDS Msil_1090 NC_011666.1 1177117 1177806 D PFAM: conserved hypothetical protein; KEGG: bid:Bind_0715 hypothetical protein; hypothetical protein 1177117..1177806 Methylocella silvestris BL2 7093852 YP_002361422.1 CDS Msil_1091 NC_011666.1 1177847 1178833 D PFAM: peptidase S58 DmpA; KEGG: bid:Bind_2683 peptidase S58 DmpA; peptidase S58 DmpA 1177847..1178833 Methylocella silvestris BL2 7093853 YP_002361423.1 CDS Msil_1092 NC_011666.1 1178859 1179860 D PFAM: cytochrome c class I; KEGG: xau:Xaut_2608 cytochrome c class I; cytochrome c class I 1178859..1179860 Methylocella silvestris BL2 7093854 YP_002361424.1 CDS Msil_1093 NC_011666.1 1179985 1182147 R PFAM: DNA/RNA non-specific endonuclease; KEGG: bbt:BBta_5484 hypothetical protein; DNA/RNA non-specific endonuclease complement(1179985..1182147) Methylocella silvestris BL2 7093855 YP_002361425.1 CDS Msil_1094 NC_011666.1 1182283 1183614 R PFAM: protein of unknown function DUF239; KEGG: lbc:LACBIDRAFT_307948 hypothetical protein Pfam: DUF239; hypothetical protein complement(1182283..1183614) Methylocella silvestris BL2 7093856 YP_002361426.1 CDS Msil_1095 NC_011666.1 1184022 1185329 D TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: bid:Bind_2682 adenylosuccinate lyase; adenylosuccinate lyase 1184022..1185329 Methylocella silvestris BL2 7093857 YP_002361427.1 CDS Msil_1096 NC_011666.1 1185377 1186012 D KEGG: bid:Bind_2681 hypothetical protein; hypothetical protein 1185377..1186012 Methylocella silvestris BL2 7093858 YP_002361428.1 CDS Msil_1097 NC_011666.1 1186016 1186567 D PFAM: protein of unknown function DUF1234; KEGG: bid:Bind_2680 protein of unknown function DUF1234; hypothetical protein 1186016..1186567 Methylocella silvestris BL2 7093859 YP_002361429.1 CDS Msil_1098 NC_011666.1 1186671 1187570 D hypothetical protein 1186671..1187570 Methylocella silvestris BL2 7093860 YP_002361430.1 CDS Msil_1099 NC_011666.1 1187575 1188903 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(1187575..1188903) Methylocella silvestris BL2 7093861 YP_002361431.1 CDS Msil_1100 NC_011666.1 1188990 1189829 D TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: bid:Bind_0712 folate-binding protein YgfZ; folate-binding protein YgfZ 1188990..1189829 Methylocella silvestris BL2 7093862 YP_002361432.1 CDS Msil_1101 NC_011666.1 1189826 1190422 D KEGG: bid:Bind_1176 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 1189826..1190422 Methylocella silvestris BL2 7093863 YP_002361433.1 CDS Msil_1102 NC_011666.1 1190419 1191081 D KEGG: bid:Bind_1174 metal dependent phosphohydrolase, HD region; metal dependent phosphohydrolase, HD region 1190419..1191081 Methylocella silvestris BL2 7093864 YP_002361434.1 CDS Msil_1103 NC_011666.1 1191195 1191707 D KEGG: bid:Bind_1173 hypothetical protein; hypothetical protein 1191195..1191707 Methylocella silvestris BL2 7093865 YP_002361435.1 CDS Msil_1104 NC_011666.1 1191806 1192063 D TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: bid:Bind_1171 exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease VII small subunit 1191806..1192063 Methylocella silvestris BL2 7093866 YP_002361436.1 CDS Msil_1105 NC_011666.1 1192157 1192684 D KEGG: bra:BRADO5776 hypothetical protein; hypothetical protein 1192157..1192684 Methylocella silvestris BL2 7093867 YP_002361437.1 CDS Msil_1106 NC_011666.1 1192737 1193426 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bid:Bind_1170 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 1192737..1193426 Methylocella silvestris BL2 7093868 YP_002361438.1 CDS Msil_1107 NC_011666.1 1193718 1195802 D KEGG: mma:MM_1983 hypothetical protein; hypothetical protein 1193718..1195802 Methylocella silvestris BL2 7093869 YP_002361439.1 CDS Msil_1108 NC_011666.1 1195799 1196332 D hypothetical protein 1195799..1196332 Methylocella silvestris BL2 7093870 YP_002361440.1 CDS Msil_1109 NC_011666.1 1196362 1198575 R KEGG: met:M446_2759 glycyl-tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta complement(1196362..1198575) Methylocella silvestris BL2 7093871 YP_002361441.1 CDS Msil_1110 NC_011666.1 1198728 1199294 D KEGG: met:M446_5995 hypothetical protein; hypothetical protein 1198728..1199294 Methylocella silvestris BL2 7093872 YP_002361442.1 CDS glyQ NC_011666.1 1199304 1200272 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(1199304..1200272) Methylocella silvestris BL2 7093873 YP_002361443.1 CDS Msil_1112 NC_011666.1 1200566 1200847 D KEGG: mrd:Mrad2831_3816 hypothetical protein; hypothetical protein 1200566..1200847 Methylocella silvestris BL2 7093874 YP_002361444.1 CDS Msil_1113 NC_011666.1 1200860 1201633 R PFAM: methyltransferase small; Methyltransferase type 12; KEGG: bid:Bind_1977 methyltransferase small; methyltransferase small complement(1200860..1201633) Methylocella silvestris BL2 7093875 YP_002361445.1 CDS Msil_1114 NC_011666.1 1201626 1201850 R KEGG: xau:Xaut_1374 hypothetical protein; hypothetical protein complement(1201626..1201850) Methylocella silvestris BL2 7093876 YP_002361446.1 CDS Msil_1115 NC_011666.1 1202004 1203017 D PFAM: Polyprenyl synthetase; KEGG: bid:Bind_0855 polyprenyl synthetase; polyprenyl synthetase 1202004..1203017 Methylocella silvestris BL2 7093877 YP_002361447.1 CDS Msil_1116 NC_011666.1 1203138 1204439 D PFAM: cell wall hydrolase SleB; KEGG: bid:Bind_0856 cell wall hydrolase SleB; cell wall hydrolase SleB 1203138..1204439 Methylocella silvestris BL2 7093878 YP_002361448.1 CDS Msil_1117 NC_011666.1 1204840 1206597 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bid:Bind_0857 tetratricopeptide TPR_2 repeat protein; hypothetical protein 1204840..1206597 Methylocella silvestris BL2 7093879 YP_002361449.1 CDS Msil_1118 NC_011666.1 1206736 1207611 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1206736..1207611 Methylocella silvestris BL2 7093880 YP_002361450.1 CDS Msil_1119 NC_011666.1 1207691 1208137 D PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: cak:Caul_1115 activator of HSP90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein 1207691..1208137 Methylocella silvestris BL2 7093881 YP_002361451.1 CDS Msil_1120 NC_011666.1 1208124 1208462 D PFAM: regulatory protein ArsR; KEGG: swi:Swit_0625 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 1208124..1208462 Methylocella silvestris BL2 7093882 YP_002361452.1 CDS Msil_1121 NC_011666.1 1208663 1208932 R hypothetical protein complement(1208663..1208932) Methylocella silvestris BL2 7093884 YP_002361453.1 CDS Msil_1122 NC_011666.1 1209154 1209819 R PFAM: class II aldolase/adducin family protein; KEGG: mex:Mext_4772 L-fuculose-phosphate aldolase; class II aldolase/adducin family protein complement(1209154..1209819) Methylocella silvestris BL2 7093885 YP_002361454.1 CDS Msil_1123 NC_011666.1 1209894 1210538 R TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: rme:Rmet_4768 2-keto-3-deoxy-phosphogluconate aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase complement(1209894..1210538) Methylocella silvestris BL2 7093886 YP_002361455.1 CDS Msil_1124 NC_011666.1 1210642 1212453 R catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase complement(1210642..1212453) Methylocella silvestris BL2 7093887 YP_002361456.1 CDS Msil_1125 NC_011666.1 1212558 1214030 R KEGG: bid:Bind_2867 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase complement(1212558..1214030) Methylocella silvestris BL2 7093888 YP_002361457.1 CDS Msil_1126 NC_011666.1 1214286 1215761 D PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bid:Bind_3040 leucyl aminopeptidase; leucyl aminopeptidase 1214286..1215761 Methylocella silvestris BL2 7093889 YP_002361458.1 CDS Msil_1127 NC_011666.1 1215775 1216635 D PFAM: NLP/P60 protein; KEGG: bid:Bind_3041 NLP/P60 protein; NLP/P60 protein 1215775..1216635 Methylocella silvestris BL2 7093890 YP_002361459.1 CDS Msil_1128 NC_011666.1 1216724 1217314 D KEGG: bid:Bind_0496 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 1216724..1217314 Methylocella silvestris BL2 7093891 YP_002361460.1 CDS Msil_1129 NC_011666.1 1217397 1218335 D TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: met:M446_4239 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 1217397..1218335 Methylocella silvestris BL2 7093892 YP_002361461.1 CDS truA NC_011666.1 1218335 1219081 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1218335..1219081 Methylocella silvestris BL2 7093893 YP_002361462.1 CDS Msil_1131 NC_011666.1 1219095 1220123 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bvi:Bcep1808_5922 AraC family transcriptional regulator; AraC family transcriptional regulator complement(1219095..1220123) Methylocella silvestris BL2 7093894 YP_002361463.1 CDS Msil_1132 NC_011666.1 1220281 1220715 D KEGG: mpo:Mpop_3825 hypothetical protein; hypothetical protein 1220281..1220715 Methylocella silvestris BL2 7093895 YP_002361464.1 CDS Msil_1133 NC_011666.1 1220724 1221509 R PFAM: protein of unknown function DUF152; KEGG: bid:Bind_3533 protein of unknown function DUF152; hypothetical protein complement(1220724..1221509) Methylocella silvestris BL2 7093896 YP_002361465.1 CDS Msil_1134 NC_011666.1 1221499 1222608 R PFAM: protein of unknown function DUF185; KEGG: mrd:Mrad2831_5412 protein of unknown function DUF185; hypothetical protein complement(1221499..1222608) Methylocella silvestris BL2 7093897 YP_002361466.1 CDS Msil_1135 NC_011666.1 1222605 1223423 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(1222605..1223423) Methylocella silvestris BL2 7093898 YP_002361467.1 CDS Msil_1136 NC_011666.1 1223586 1223852 D PFAM: protein of unknown function DUF526; KEGG: bid:Bind_3536 protein of unknown function DUF526; hypothetical protein 1223586..1223852 Methylocella silvestris BL2 7093899 YP_002361468.1 CDS Msil_1137 NC_011666.1 1224220 1224720 D PFAM: Protein of unknown function DUF1790; KEGG: bid:Bind_1259 protein of unknown function DUF1790; hypothetical protein 1224220..1224720 Methylocella silvestris BL2 7093900 YP_002361469.1 CDS Msil_1138 NC_011666.1 1224723 1225544 D KEGG: bid:Bind_1258 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 1224723..1225544 Methylocella silvestris BL2 7093901 YP_002361470.1 CDS Msil_1139 NC_011666.1 1225548 1226009 D hypothetical protein 1225548..1226009 Methylocella silvestris BL2 7093902 YP_002361471.1 CDS Msil_1140 NC_011666.1 1226100 1226828 D PFAM: regulatory protein TetR; KEGG: bid:Bind_1257 regulatory protein TetR; TetR family transcriptional regulator 1226100..1226828 Methylocella silvestris BL2 7093903 YP_002361472.1 CDS Msil_1141 NC_011666.1 1226830 1227336 R PFAM: FxsA cytoplasmic membrane protein; KEGG: bid:Bind_3110 FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein complement(1226830..1227336) Methylocella silvestris BL2 7093904 YP_002361473.1 CDS Msil_1142 NC_011666.1 1227460 1228179 D PFAM: import inner membrane translocase subunit Tim44; KEGG: mex:Mext_1560 import inner membrane translocase subunit Tim44; import inner membrane translocase subunit Tim44 1227460..1228179 Methylocella silvestris BL2 7093905 YP_002361474.1 CDS Msil_1143 NC_011666.1 1228207 1229262 D PFAM: MltA domain protein; 3D domain protein; KEGG: bid:Bind_3112 MltA domain protein; MltA domain-containing protein 1228207..1229262 Methylocella silvestris BL2 7093906 YP_002361475.1 CDS Msil_1144 NC_011666.1 1229259 1229861 D PFAM: Smr protein/MutS2; KEGG: bid:Bind_3113 Smr protein/MutS2; Smr protein/MutS2 1229259..1229861 Methylocella silvestris BL2 7093907 YP_002361476.1 CDS Msil_1145 NC_011666.1 1229956 1230381 D PFAM: protein of unknown function DUF1025; KEGG: met:M446_0865 protein of unknown function DUF1025; hypothetical protein 1229956..1230381 Methylocella silvestris BL2 7093908 YP_002361477.1 CDS Msil_1146 NC_011666.1 1230441 1230836 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: aba:Acid345_2510 conserved hypothetical protein, cupin barrel; cupin 1230441..1230836 Methylocella silvestris BL2 7093909 YP_002361478.1 CDS Msil_1147 NC_011666.1 1230962 1231567 D KEGG: rpb:RPB_0342 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase small subunit 1230962..1231567 Methylocella silvestris BL2 7093910 YP_002361479.1 CDS Msil_1148 NC_011666.1 1232117 1233016 D TIGRFAM: coenzyme PQQ biosynthesis protein B; KEGG: bid:Bind_3322 coenzyme PQQ biosynthesis protein B; coenzyme PQQ biosynthesis protein B 1232117..1233016 Methylocella silvestris BL2 7093911 YP_002361480.1 CDS Msil_1149 NC_011666.1 1233013 1233774 D Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC 1233013..1233774 Methylocella silvestris BL2 7093912 YP_002361481.1 CDS Msil_1150 NC_011666.1 1233771 1234079 D PFAM: coenzyme PQQ synthesis D; KEGG: bid:Bind_3320 coenzyme PQQ synthesis D; coenzyme PQQ synthesis D 1233771..1234079 Methylocella silvestris BL2 7093913 YP_002361482.1 CDS Msil_1151 NC_011666.1 1234076 1235197 D TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; KEGG: bid:Bind_3319 coenzyme PQQ biosynthesis protein E; pyrroloquinoline quinone biosynthesis protein PqqE 1234076..1235197 Methylocella silvestris BL2 7093914 YP_002361483.1 CDS Msil_1152 NC_011666.1 1235530 1239045 D Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 1235530..1239045 Methylocella silvestris BL2 7093915 YP_002361484.1 CDS Msil_1153 NC_011666.1 1239076 1239921 R PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; Indole-3-glycerol phosphate synthase; KEGG: bid:Bind_1560 indole-3-glycerol-phosphate synthase; indole-3-glycerol-phosphate synthase complement(1239076..1239921) Methylocella silvestris BL2 7093916 YP_002361485.1 CDS Msil_1154 NC_011666.1 1240120 1241550 R PFAM: homospermidine synthase; KEGG: bid:Bind_1078 homospermidine synthase; homospermidine synthase complement(1240120..1241550) Methylocella silvestris BL2 7093917 YP_002361486.1 CDS Msil_1155 NC_011666.1 1241833 1242393 D hypothetical protein 1241833..1242393 Methylocella silvestris BL2 7093918 YP_002361487.1 CDS Msil_1156 NC_011666.1 1242439 1243023 R PFAM: GCN5-related N-acetyltransferase; KEGG: bid:Bind_1079 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1242439..1243023) Methylocella silvestris BL2 7093919 YP_002361488.1 CDS Msil_1157 NC_011666.1 1243178 1244308 R PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bid:Bind_1080 Orn/DAP/Arg decarboxylase 2; Orn/DAP/Arg decarboxylase 2 complement(1243178..1244308) Methylocella silvestris BL2 7093920 YP_002361489.1 CDS mdoG NC_011666.1 1245160 1246743 D involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 1245160..1246743 Methylocella silvestris BL2 7093921 YP_002361490.1 CDS Msil_1159 NC_011666.1 1246789 1247253 D PFAM: GCN5-related N-acetyltransferase; KEGG: bid:Bind_1082 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1246789..1247253 Methylocella silvestris BL2 7093922 YP_002361491.1 CDS Msil_1160 NC_011666.1 1247315 1248169 D KEGG: pmc:P9515_13901 hypothetical protein; hypothetical protein 1247315..1248169 Methylocella silvestris BL2 7093923 YP_002361492.1 CDS Msil_1161 NC_011666.1 1248180 1248986 R PFAM: Creatininase; KEGG: bid:Bind_1083 creatininase; creatininase complement(1248180..1248986) Methylocella silvestris BL2 7093924 YP_002361493.1 CDS Msil_1162 NC_011666.1 1249125 1250159 D PFAM: NMT1/THI5 like domain protein; KEGG: bid:Bind_1089 NMT1/THI5 like domain protein; NMT1/THI5 like domain-containing protein 1249125..1250159 Methylocella silvestris BL2 7093925 YP_002361494.1 CDS Msil_1163 NC_011666.1 1250181 1250954 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mll1293 ATP-binding protein of ABC transporter; ABC transporter-like protein 1250181..1250954 Methylocella silvestris BL2 7093926 YP_002361495.1 CDS Msil_1164 NC_011666.1 1250951 1251733 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bid:Bind_1091 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1250951..1251733 Methylocella silvestris BL2 7093927 YP_002361496.1 CDS Msil_1165 NC_011666.1 1251791 1252798 D PFAM: PfkB domain protein; KEGG: bid:Bind_0215 PfkB domain protein; PfkB domain-containing protein 1251791..1252798 Methylocella silvestris BL2 7093928 YP_002361497.1 CDS Msil_1166 NC_011666.1 1252853 1253611 R PFAM: filamentation induced by cAMP protein Fic; KEGG: mlo:mlr2757 hypothetical protein; filamentation induced by cAMP protein fic complement(1252853..1253611) Methylocella silvestris BL2 7092322 YP_002361498.1 CDS Msil_1167 NC_011666.1 1253802 1255121 R catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase complement(1253802..1255121) Methylocella silvestris BL2 7092240 YP_002361499.1 CDS Msil_1168 NC_011666.1 1255454 1256467 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: azc:AZC_2261 UDP-glucuronate 5'-epimerase; NAD-dependent epimerase/dehydratase 1255454..1256467 Methylocella silvestris BL2 7092241 YP_002361500.1 CDS Msil_1169 NC_011666.1 1256666 1257787 D KEGG: nha:Nham_0912 hypothetical protein; hypothetical protein 1256666..1257787 Methylocella silvestris BL2 7092242 YP_002361501.1 CDS Msil_1170 NC_011666.1 1257836 1258672 R PFAM: protein of unknown function DUF344; KEGG: reh:H16_A1271 hypothetical protein; hypothetical protein complement(1257836..1258672) Methylocella silvestris BL2 7092243 YP_002361502.1 CDS Msil_1171 NC_011666.1 1258683 1259159 R KEGG: xau:Xaut_2306 hypothetical protein; hypothetical protein complement(1258683..1259159) Methylocella silvestris BL2 7092244 YP_002361503.1 CDS Msil_1172 NC_011666.1 1259405 1260649 D KEGG: rpd:RPD_0922 putative transmembrane protein; putative transmembrane protein 1259405..1260649 Methylocella silvestris BL2 7092245 YP_002361504.1 CDS Msil_1173 NC_011666.1 1260664 1262469 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(1260664..1262469) Methylocella silvestris BL2 7092246 YP_002361505.1 CDS Msil_1174 NC_011666.1 1262559 1263776 R KEGG: aas:Aasi_0851 hypothetical protein; TPR repeat SEL1 subfamily protein-like protein complement(1262559..1263776) Methylocella silvestris BL2 7092247 YP_002361506.1 CDS Msil_1175 NC_011666.1 1263926 1264321 R hypothetical protein complement(1263926..1264321) Methylocella silvestris BL2 7092248 YP_002361507.1 CDS Msil_1176 NC_011666.1 1264357 1264797 R KEGG: lbf:LBF_2102 hypothetical protein; hypothetical protein complement(1264357..1264797) Methylocella silvestris BL2 7092249 YP_002361508.1 CDS Msil_1177 NC_011666.1 1264889 1265878 R PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bid:Bind_3124 integrase family protein; integrase family protein complement(1264889..1265878) Methylocella silvestris BL2 7092250 YP_002361509.1 CDS Msil_1178 NC_011666.1 1265913 1266230 R PFAM: protein of unknown function DUF1476; KEGG: bbt:BBta_5410 hypothetical protein; hypothetical protein complement(1265913..1266230) Methylocella silvestris BL2 7092251 YP_002361510.1 CDS Msil_1179 NC_011666.1 1266659 1267453 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1266659..1267453 Methylocella silvestris BL2 7092252 YP_002361511.1 CDS Msil_1180 NC_011666.1 1267628 1267867 D TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: met:M446_0422 phosphoribosylformylglycinamidine synthase, PurS; phosphoribosylformylglycinamidine synthase PurS 1267628..1267867 Methylocella silvestris BL2 7092253 YP_002361512.1 CDS Msil_1181 NC_011666.1 1267930 1268625 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 1267930..1268625 Methylocella silvestris BL2 7092254 YP_002361513.1 CDS Msil_1182 NC_011666.1 1268719 1268988 D hypothetical protein 1268719..1268988 Methylocella silvestris BL2 7092255 YP_002361514.1 CDS Msil_1183 NC_011666.1 1268988 1269170 D hypothetical protein 1268988..1269170 Methylocella silvestris BL2 7092256 YP_002361515.1 CDS Msil_1184 NC_011666.1 1269385 1271592 D KEGG: bbt:BBta_5401 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; phosphoribosylformylglycinamidine synthase II 1269385..1271592 Methylocella silvestris BL2 7092257 YP_002361516.1 CDS Msil_1185 NC_011666.1 1271661 1271894 D PFAM: BolA family protein; KEGG: bid:Bind_3118 BolA family protein; BolA family protein 1271661..1271894 Methylocella silvestris BL2 7092258 YP_002361517.1 CDS Msil_1186 NC_011666.1 1271943 1272281 D TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: bid:Bind_3117 glutaredoxin-like protein; glutaredoxin-like protein 1271943..1272281 Methylocella silvestris BL2 7092259 YP_002361518.1 CDS Msil_1187 NC_011666.1 1272404 1273081 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bid:Bind_3616 redoxin domain protein; redoxin domain-containing protein complement(1272404..1273081) Methylocella silvestris BL2 7092260 YP_002361519.1 CDS Msil_1188 NC_011666.1 1273141 1274541 D TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: met:M446_5988 argininosuccinate lyase; argininosuccinate lyase 1273141..1274541 Methylocella silvestris BL2 7092261 YP_002361520.1 CDS Msil_1189 NC_011666.1 1274552 1275217 D PFAM: phospholipase/Carboxylesterase; KEGG: bid:Bind_0446 phospholipase/carboxylesterase; phospholipase/carboxylesterase 1274552..1275217 Methylocella silvestris BL2 7092262 YP_002361521.1 CDS Msil_1190 NC_011666.1 1275296 1276222 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_2283 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1275296..1276222) Methylocella silvestris BL2 7092263 YP_002361522.1 CDS Msil_1191 NC_011666.1 1276327 1277385 D PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: rpc:RPC_2899 fructose-1,6-bisphosphatase; inositol phosphatase/fructose-16-bisphosphatase 1276327..1277385 Methylocella silvestris BL2 7092264 YP_002361523.1 CDS Msil_1192 NC_011666.1 1277596 1278510 D PFAM: phosphoribulokinase/uridine kinase; KEGG: rpt:Rpal_5125 phosphoribulokinase; phosphoribulokinase 1277596..1278510 Methylocella silvestris BL2 7092265 YP_002361524.1 CDS Msil_1193 NC_011666.1 1278485 1280488 D TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: rpt:Rpal_5124 transketolase; transketolase 1278485..1280488 Methylocella silvestris BL2 7092266 YP_002361525.1 CDS Msil_1194 NC_011666.1 1280647 1281732 D KEGG: rpc:RPC_2896 fructose-1,6-bisphosphate aldolase; TIGRFAM: ketose-bisphosphate aldolase; fructose-bisphosphate aldolase, class II, Calvin cycle subtype; PFAM: ketose-bisphosphate aldolase class-II; fructose-bisphosphate aldolase 1280647..1281732 Methylocella silvestris BL2 7092267 YP_002361526.1 CDS rbcL NC_011666.1 1281772 1283226 D type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 1281772..1283226 Methylocella silvestris BL2 7092268 YP_002361527.1 CDS Msil_1196 NC_011666.1 1283328 1283747 D PFAM: ribulose bisphosphate carboxylase small chain; KEGG: rpc:RPC_1328 ribulose-bisphosphate carboxylase; ribulose-bisphosphate carboxylase 1283328..1283747 Methylocella silvestris BL2 7092269 YP_002361528.1 CDS Msil_1197 NC_011666.1 1283778 1284701 D KEGG: rpt:Rpal_1749 CbbX protein; TIGRFAM: CbbX protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; CbbX protein 1283778..1284701 Methylocella silvestris BL2 7092270 YP_002361529.1 CDS Msil_1198 NC_011666.1 1284715 1285398 D PFAM: ribulose-phosphate 3-epimerase; KEGG: bid:Bind_1024 ribulose-phosphate 3-epimerase; Ribulose-phosphate 3-epimerase 1284715..1285398 Methylocella silvestris BL2 7092271 YP_002361530.1 CDS Msil_1199 NC_011666.1 1285572 1285706 D PFAM: ribosomal protein L34; KEGG: met:M446_5079 ribosomal protein L34; 50S ribosomal protein L34 1285572..1285706 Methylocella silvestris BL2 7092272 YP_002361531.1 CDS Msil_1200 NC_011666.1 1285786 1286238 D TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: bid:Bind_3327 ribonuclease P protein component; ribonuclease P protein component 1285786..1286238 Methylocella silvestris BL2 7092273 YP_002361532.1 CDS Msil_1201 NC_011666.1 1286340 1288142 D PFAM: 60 kDa inner membrane insertion protein; KEGG: bid:Bind_3328 60 kDa inner membrane insertion protein; 60 kDa inner membrane insertion protein 1286340..1288142 Methylocella silvestris BL2 7092274 YP_002361533.1 CDS engB NC_011666.1 1288139 1288819 D binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 1288139..1288819 Methylocella silvestris BL2 7092275 YP_002361534.1 CDS Msil_1203 NC_011666.1 1288905 1289789 D TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: bid:Bind_3330 acetylglutamate kinase; acetylglutamate kinase 1288905..1289789 Methylocella silvestris BL2 7092276 YP_002361535.1 CDS Msil_1204 NC_011666.1 1289855 1290577 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bid:Bind_3331 pyrimidine 5'-nucleotidase; pyrimidine 5'-nucleotidase 1289855..1290577 Methylocella silvestris BL2 7092277 YP_002361536.1 CDS Msil_1205 NC_011666.1 1290677 1291534 D TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: bid:Bind_3332 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 1290677..1291534 Methylocella silvestris BL2 7092278 YP_002361537.1 CDS Msil_1206 NC_011666.1 1291534 1292037 D KEGG: bid:Bind_3333 hypothetical protein; hypothetical protein 1291534..1292037 Methylocella silvestris BL2 7092279 YP_002361538.1 CDS Msil_1207 NC_011666.1 1292106 1292978 D PFAM: Chorismate mutase; KEGG: bid:Bind_0306 chorismate mutase; hypothetical protein 1292106..1292978 Methylocella silvestris BL2 7092280 YP_002361539.1 CDS Msil_1208 NC_011666.1 1293003 1294118 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 1293003..1294118 Methylocella silvestris BL2 7092281 YP_002361540.1 CDS Msil_1209 NC_011666.1 1294124 1295080 D PFAM: Prephenate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bid:Bind_0308 arogenate dehydrogenase; Arogenate dehydrogenase 1294124..1295080 Methylocella silvestris BL2 7092282 YP_002361541.1 CDS Msil_1210 NC_011666.1 1295253 1295819 D PFAM: Invasion associated locus B family protein; KEGG: met:M446_0304 putative invasion protein B; invasion associated locus B family protein 1295253..1295819 Methylocella silvestris BL2 7092283 YP_002361542.1 CDS Msil_1211 NC_011666.1 1295898 1296836 R TIGRFAM: esterase, PHB depolymerase family; PFAM: Esterase PHB depolymerase; KEGG: smd:Smed_2991 esterase, PHB depolymerase family; esterase, PHB depolymerase family complement(1295898..1296836) Methylocella silvestris BL2 7092284 YP_002361543.1 CDS Msil_1212 NC_011666.1 1296910 1297047 R hypothetical protein complement(1296910..1297047) Methylocella silvestris BL2 7092285 YP_002361544.1 CDS Msil_1213 NC_011666.1 1297114 1297533 R KEGG: nha:Nham_4274 putative transcriptional regulator, CopG family; putative CopG family transcriptional regulator complement(1297114..1297533) Methylocella silvestris BL2 7092286 YP_002361545.1 CDS Msil_1214 NC_011666.1 1297913 1299457 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 complement(1297913..1299457) Methylocella silvestris BL2 7092287 YP_002361546.1 CDS Msil_1215 NC_011666.1 1299459 1300799 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 complement(1299459..1300799) Methylocella silvestris BL2 7092288 YP_002361547.1 CDS Msil_1216 NC_011666.1 1300851 1301228 R TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: xau:Xaut_2200 glycine cleavage system H protein; glycine cleavage system H protein complement(1300851..1301228) Methylocella silvestris BL2 7092289 YP_002361548.1 CDS Msil_1217 NC_011666.1 1301228 1302361 R TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: bid:Bind_0733 glycine cleavage system T protein; glycine cleavage system T protein complement(1301228..1302361) Methylocella silvestris BL2 7092290 YP_002361549.1 CDS Msil_1218 NC_011666.1 1302757 1303392 R KEGG: bid:Bind_0732 hypothetical protein; hypothetical protein complement(1302757..1303392) Methylocella silvestris BL2 7092291 YP_002361550.1 CDS Msil_1219 NC_011666.1 1303490 1304809 R PFAM: glycosyl transferase family 2; KEGG: bid:Bind_0285 glycosyl transferase family 2; family 2 glycosyl transferase complement(1303490..1304809) Methylocella silvestris BL2 7092292 YP_002361551.1 CDS Msil_1220 NC_011666.1 1305267 1306070 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bid:Bind_0286 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1305267..1306070) Methylocella silvestris BL2 7092293 YP_002361552.1 CDS Msil_1221 NC_011666.1 1306100 1306546 R PFAM: MaoC domain protein dehydratase; KEGG: bid:Bind_0287 MaoC domain protein dehydratase; MaoC domain-containing protein dehydratase complement(1306100..1306546) Methylocella silvestris BL2 7092294 YP_002361553.1 CDS Msil_1222 NC_011666.1 1306543 1306986 R KEGG: bid:Bind_3486 hypothetical protein; hypothetical protein complement(1306543..1306986) Methylocella silvestris BL2 7092295 YP_002361554.1 CDS Msil_1223 NC_011666.1 1306986 1308209 R PFAM: Beta-ketoacyl synthase; KEGG: bid:Bind_3487 beta-ketoacyl synthase; beta-ketoacyl synthase complement(1306986..1308209) Methylocella silvestris BL2 7092296 YP_002361555.1 CDS Msil_1224 NC_011666.1 1308212 1308481 R KEGG: bid:Bind_3488 hypothetical protein; hypothetical protein complement(1308212..1308481) Methylocella silvestris BL2 7092297 YP_002361556.1 CDS Msil_1225 NC_011666.1 1308882 1309472 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bid:Bind_0052 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(1308882..1309472) Methylocella silvestris BL2 7092298 YP_002361557.1 CDS Msil_1226 NC_011666.1 1309768 1311705 R Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase complement(1309768..1311705) Methylocella silvestris BL2 7092299 YP_002361558.1 CDS Msil_1227 NC_011666.1 1311951 1312634 R KEGG: bid:Bind_3484 hypothetical protein; hypothetical protein complement(1311951..1312634) Methylocella silvestris BL2 7092300 YP_002361559.1 CDS Msil_1228 NC_011666.1 1312776 1313411 R PFAM: protein of unknown function DUF1223; KEGG: bid:Bind_3483 protein of unknown function DUF1223; hypothetical protein complement(1312776..1313411) Methylocella silvestris BL2 7092301 YP_002361560.1 CDS Msil_1229 NC_011666.1 1313757 1314404 D PFAM: LemA family protein; KEGG: bid:Bind_3482 LemA family protein; LemA family protein 1313757..1314404 Methylocella silvestris BL2 7092302 YP_002361561.1 CDS Msil_1230 NC_011666.1 1314461 1315345 D PFAM: protein of unknown function DUF477; KEGG: bid:Bind_3481 protein of unknown function DUF477; hypothetical protein 1314461..1315345 Methylocella silvestris BL2 7092303 YP_002361562.1 CDS Msil_1231 NC_011666.1 1315345 1315953 D PFAM: protein of unknown function DUF477; KEGG: bid:Bind_3480 protein of unknown function DUF477; hypothetical protein 1315345..1315953 Methylocella silvestris BL2 7092304 YP_002361563.1 CDS Msil_1232 NC_011666.1 1316102 1316812 D PFAM: protein of unknown function DUF477; KEGG: bid:Bind_3480 protein of unknown function DUF477; hypothetical protein 1316102..1316812 Methylocella silvestris BL2 7092305 YP_002361564.1 CDS Msil_1233 NC_011666.1 1316756 1317973 R TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bid:Bind_3645 lytic murein transglycosylase; lytic murein transglycosylase complement(1316756..1317973) Methylocella silvestris BL2 7092306 YP_002361565.1 CDS Msil_1234 NC_011666.1 1318104 1318520 R PFAM: response regulator receiver; KEGG: mpo:Mpop_3474 response regulator receiver protein; response regulator receiver protein complement(1318104..1318520) Methylocella silvestris BL2 7092307 YP_002361566.1 CDS Msil_1235 NC_011666.1 1318804 1319742 D PFAM: N-formylglutamate amidohydrolase; KEGG: bid:Bind_3643 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 1318804..1319742 Methylocella silvestris BL2 7092308 YP_002361567.1 CDS Msil_1236 NC_011666.1 1319780 1320337 R PFAM: Invasion associated locus B family protein; KEGG: bid:Bind_0731 invasion associated locus B family protein; invasion associated locus B family protein complement(1319780..1320337) Methylocella silvestris BL2 7092309 YP_002361568.1 CDS Msil_1237 NC_011666.1 1320676 1321587 D KEGG: bid:Bind_0730 cytochrome c oxidase, subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome c oxidase subunit II 1320676..1321587 Methylocella silvestris BL2 7092310 YP_002361569.1 CDS Msil_1238 NC_011666.1 1321617 1323281 D KEGG: bid:Bind_0729 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I 1321617..1323281 Methylocella silvestris BL2 7092311 YP_002361570.1 CDS Msil_1239 NC_011666.1 1323529 1324479 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 1323529..1324479 Methylocella silvestris BL2 7092312 YP_002361571.1 CDS Msil_1240 NC_011666.1 1324502 1324678 D KEGG: bid:Bind_0727 conserved protein CoxF; hypothetical protein 1324502..1324678 Methylocella silvestris BL2 7092313 YP_002361572.1 CDS Msil_1241 NC_011666.1 1324686 1325291 D PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: bid:Bind_0726 cytochrome c oxidase assembly protein CtaG/Cox11; cytochrome c oxidase assembly protein CtaG/Cox11 1324686..1325291 Methylocella silvestris BL2 7092314 YP_002361573.1 CDS Msil_1242 NC_011666.1 1325402 1326262 D PFAM: cytochrome c oxidase subunit III; KEGG: bid:Bind_0725 cytochrome c oxidase subunit III; cytochrome c oxidase subunit III 1325402..1326262 Methylocella silvestris BL2 7092315 YP_002361574.1 CDS Msil_1243 NC_011666.1 1326307 1326792 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: rru:Rru_A2000 hypothetical protein; cupin complement(1326307..1326792) Methylocella silvestris BL2 7092316 YP_002361575.1 CDS Msil_1244 NC_011666.1 1326882 1327982 R KEGG: rru:Rru_A1998 ribulose 1,5-bisphosphate carboxylase large subunit; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit complement(1326882..1327982) Methylocella silvestris BL2 7092317 YP_002361576.1 CDS Msil_1245 NC_011666.1 1328015 1329310 R PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: bid:Bind_0848 hypothetical protein; hypothetical protein complement(1328015..1329310) Methylocella silvestris BL2 7092318 YP_002361577.1 CDS Msil_1246 NC_011666.1 1329472 1332288 R PFAM: Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: bid:Bind_0847 condensation domain protein; condensation domain-containing protein complement(1329472..1332288) Methylocella silvestris BL2 7092319 YP_002361578.1 CDS Msil_1247 NC_011666.1 1332321 1340375 R TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase ; Acyl transferase; KEGG: bid:Bind_0846 amino acid adenylation domain protein; amino acid adenylation domain-containing protein complement(1332321..1340375) Methylocella silvestris BL2 7092320 YP_002361579.1 CDS Msil_1248 NC_011666.1 1340386 1342347 R TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: npu:Npun_R6591 amino acid adenylation domain-containing protein; amino acid adenylation domain-containing protein complement(1340386..1342347) Methylocella silvestris BL2 7091176 YP_002361580.1 CDS Msil_1249 NC_011666.1 1343143 1343520 D PFAM: protein of unknown function DUF983; KEGG: bid:Bind_0724 protein of unknown function DUF983; hypothetical protein 1343143..1343520 Methylocella silvestris BL2 7091258 YP_002361581.1 CDS Msil_1250 NC_011666.1 1343517 1344260 D PFAM: Surfeit locus 1 family protein; KEGG: bid:Bind_0723 surfeit locus 1 family protein; surfeit locus 1 family protein 1343517..1344260 Methylocella silvestris BL2 7091259 YP_002361582.1 CDS Msil_1251 NC_011666.1 1344383 1345804 D KEGG: bid:Bind_0722 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; threonine synthase 1344383..1345804 Methylocella silvestris BL2 7091260 YP_002361583.1 CDS Msil_1252 NC_011666.1 1345801 1347066 D PFAM: peptidase M16 domain protein; KEGG: bid:Bind_0721 peptidase M16 domain protein; peptidase M16 domain-containing protein 1345801..1347066 Methylocella silvestris BL2 7091261 YP_002361584.1 CDS Msil_1253 NC_011666.1 1347080 1347688 D PFAM: GCN5-related N-acetyltransferase; KEGG: bid:Bind_0720 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1347080..1347688 Methylocella silvestris BL2 7091262 YP_002361585.1 CDS Msil_1254 NC_011666.1 1347718 1350615 D KEGG: bid:Bind_0719 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; diguanylate cyclase/phosphodiesterase 1347718..1350615 Methylocella silvestris BL2 7091263 YP_002361586.1 CDS Msil_1255 NC_011666.1 1350643 1351263 R PFAM: protein of unknown function DUF179; KEGG: bid:Bind_0718 protein of unknown function DUF179; hypothetical protein complement(1350643..1351263) Methylocella silvestris BL2 7091264 YP_002361587.1 CDS Msil_1256 NC_011666.1 1351442 1352392 D KEGG: bid:Bind_0717 hypothetical protein; hypothetical protein 1351442..1352392 Methylocella silvestris BL2 7091265 YP_002361588.1 CDS Msil_1257 NC_011666.1 1352382 1352867 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mrd:Mrad2831_3915 redoxin domain protein; redoxin domain-containing protein 1352382..1352867 Methylocella silvestris BL2 7091266 YP_002361589.1 CDS Msil_1258 NC_011666.1 1352907 1353368 R PFAM: ribonuclease H; KEGG: bid:Bind_2333 ribonuclease H; ribonuclease H complement(1352907..1353368) Methylocella silvestris BL2 7091267 YP_002361590.1 CDS Msil_1259 NC_011666.1 1353382 1354347 R KEGG: bid:Bind_2334 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: aminoglycoside phosphotransferase; homoserine kinase complement(1353382..1354347) Methylocella silvestris BL2 7091268 YP_002361591.1 CDS Msil_1260 NC_011666.1 1354504 1355241 R PFAM: protein of unknown function DUF502; KEGG: rpe:RPE_2787 protein of unknown function DUF502; hypothetical protein complement(1354504..1355241) Methylocella silvestris BL2 7091269 YP_002361592.1 CDS Msil_1261 NC_011666.1 1355481 1356938 R PFAM: Peptidoglycan-binding domain 1 protein; KEGG: met:M446_6421 peptidoglycan-binding domain 1 protein; peptidoglycan-binding domain 1 protein complement(1355481..1356938) Methylocella silvestris BL2 7091270 YP_002361593.1 CDS Msil_1262 NC_011666.1 1357783 1359363 D PFAM: methane/phenol/toluene hydroxylase; KEGG: mca:MCA1194 methane monooxygenase, A subunit, alpha chain; methane monooxygenase 1357783..1359363 Methylocella silvestris BL2 7091271 YP_002361594.1 CDS Msil_1263 NC_011666.1 1359473 1360648 D PFAM: methane/phenol/toluene hydroxylase; KEGG: mca:MCA1195 methane monooxygenase, A subunit, beta chain; methane monooxygenase 1359473..1360648 Methylocella silvestris BL2 7091272 YP_002361595.1 CDS Msil_1264 NC_011666.1 1360661 1361074 D PFAM: monooxygenase component MmoB/DmpM; KEGG: mca:MCA1196 methane monooxygenase, B subunit; monooxygenase component MmoB/DmpM 1360661..1361074 Methylocella silvestris BL2 7091273 YP_002361596.1 CDS Msil_1265 NC_011666.1 1361099 1361611 D PFAM: methane monooxygenase hydrolase gamma chain; KEGG: mca:MCA1198 methane monooxygenase, A subunit, gamma chain; methane monooxygenase 1361099..1361611 Methylocella silvestris BL2 7091274 YP_002361597.1 CDS Msil_1266 NC_011666.1 1361696 1361983 D KEGG: mca:MCA1199 methane monooxygenase, D subunit; hypothetical protein 1361696..1361983 Methylocella silvestris BL2 7091275 YP_002361598.1 CDS Msil_1267 NC_011666.1 1362198 1363250 D PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mca:MCA1200 methane monooxygenase, C subunit; oxidoreductase FAD/NAD(P)-binding domain-containing protein 1362198..1363250 Methylocella silvestris BL2 7091276 YP_002361599.1 CDS Msil_1268 NC_011666.1 1363401 1365383 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: mca:MCA1205 sigma-54 dependent transcriptional regulator; Fis family GAF modulated sigma54 specific transcriptional regulator 1363401..1365383 Methylocella silvestris BL2 7091277 YP_002361600.1 CDS Msil_1269 NC_011666.1 1365417 1365767 D KEGG: mca:MCA1201 hypothetical protein; hypothetical protein 1365417..1365767 Methylocella silvestris BL2 7091278 YP_002361601.1 CDS Msil_1270 NC_011666.1 1366086 1367762 D PFAM: chaperonin Cpn60/TCP-1; KEGG: mca:MCA1202 chaperonin, 60 kDa subunit; chaperonin Cpn60/TCP-1 1366086..1367762 Methylocella silvestris BL2 7091279 YP_002361602.1 CDS Msil_1271 NC_011666.1 1368236 1368586 D hypothetical protein 1368236..1368586 Methylocella silvestris BL2 7091280 YP_002361603.1 CDS Msil_1272 NC_011666.1 1368703 1369179 D PFAM: ferric-uptake regulator; KEGG: bid:Bind_0491 ferric uptake regulator, Fur family; Fur family ferric uptake regulator 1368703..1369179 Methylocella silvestris BL2 7091281 YP_002361604.1 CDS Msil_1273 NC_011666.1 1369630 1369977 R PFAM: cytochrome c class I; KEGG: bbt:BBta_0348 putative cytochrome c precursor; cytochrome c class I complement(1369630..1369977) Methylocella silvestris BL2 7091282 YP_002361605.1 CDS Msil_1274 NC_011666.1 1370648 1370896 R KEGG: met:M446_5236 conserved hypothetical protein; putative signal peptide; hypothetical protein complement(1370648..1370896) Methylocella silvestris BL2 7091283 YP_002361606.1 CDS Msil_1275 NC_011666.1 1371258 1371779 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bcm:Bcenmc03_5886 2Fe-2S iron-sulfur cluster binding domain-containing protein; (2Fe-2S)-binding domain-containing protein complement(1371258..1371779) Methylocella silvestris BL2 7091284 YP_002361607.1 CDS Msil_1276 NC_011666.1 1371776 1374595 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: cti:RALTA_B1658 putative xanthine deshydrogenase; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase complement(1371776..1374595) Methylocella silvestris BL2 7091285 YP_002361608.1 CDS Msil_1277 NC_011666.1 1374620 1377790 R PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: xau:Xaut_3341 multicopper oxidase type 2; multicopper oxidase type 3 complement(1374620..1377790) Methylocella silvestris BL2 7091286 YP_002361609.1 CDS Msil_1278 NC_011666.1 1378100 1378384 D KEGG: bra:BRADO5931 hypothetical protein; hypothetical protein 1378100..1378384 Methylocella silvestris BL2 7091287 YP_002361610.1 CDS Msil_1279 NC_011666.1 1378867 1379184 D KEGG: bid:Bind_1603 filamentous haemagglutinin family outer membrane protein; hypothetical protein 1378867..1379184 Methylocella silvestris BL2 7091288 YP_002361611.1 CDS Msil_1280 NC_011666.1 1379266 1379583 D hypothetical protein 1379266..1379583 Methylocella silvestris BL2 7091289 YP_002361612.1 CDS Msil_1281 NC_011666.1 1380332 1380970 D KEGG: bra:BRADO5968 putative haemagglutinin-like (or adhesin-like) with a signal peptide; hypothetical protein 1380332..1380970 Methylocella silvestris BL2 7091290 YP_002361613.1 CDS Msil_1282 NC_011666.1 1380981 1382426 D KEGG: rci:RCIX1942 hypothetical protein; hypothetical protein 1380981..1382426 Methylocella silvestris BL2 7091291 YP_002361614.1 CDS Msil_1283 NC_011666.1 1382553 1382759 D hypothetical protein 1382553..1382759 Methylocella silvestris BL2 7091292 YP_002361615.1 CDS Msil_1285 NC_011666.1 1383220 1383540 D KEGG: bra:BRADO1246 hypothetical protein; hypothetical protein 1383220..1383540 Methylocella silvestris BL2 7091294 YP_002361616.1 CDS Msil_1286 NC_011666.1 1383543 1384568 D KEGG: gox:GOX2580 hypothetical protein; hypothetical protein 1383543..1384568 Methylocella silvestris BL2 7091295 YP_002361617.1 CDS Msil_1287 NC_011666.1 1384810 1385421 D PFAM: integrase family protein; KEGG: mrd:Mrad2831_6083 integrase family protein; integrase family protein 1384810..1385421 Methylocella silvestris BL2 7091296 YP_002361618.1 CDS Msil_1288 NC_011666.1 1385658 1386428 R KEGG: azo:azo2309 hypothetical protein; hypothetical protein complement(1385658..1386428) Methylocella silvestris BL2 7091297 YP_002361619.1 CDS Msil_1289 NC_011666.1 1386852 1387223 D KEGG: rpt:Rpal_2510 flavin reductase domain protein FMN-binding; flavin reductase domain-containing protein 1386852..1387223 Methylocella silvestris BL2 7091298 YP_002361620.1 CDS Msil_1290 NC_011666.1 1387503 1388432 R PFAM: Integrase catalytic region; KEGG: nha:Nham_1167 integrase, catalytic region; integrase catalytic subunit complement(1387503..1388432) Methylocella silvestris BL2 7091299 YP_002361621.1 CDS Msil_1291 NC_011666.1 1388482 1388733 R PFAM: transposase IS3/IS911 family protein; KEGG: mpo:Mpop_3816 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(1388482..1388733) Methylocella silvestris BL2 7091300 YP_002361622.1 CDS Msil_1292 NC_011666.1 1388784 1388891 R hypothetical protein complement(1388784..1388891) Methylocella silvestris BL2 7091301 YP_002361623.1 CDS Msil_1294 NC_011666.1 1389715 1391046 R KEGG: sus:Acid_6572 hypothetical protein; hypothetical protein complement(1389715..1391046) Methylocella silvestris BL2 7091303 YP_002361624.1 CDS Msil_1295 NC_011666.1 1391549 1392703 R PFAM: amidohydrolase 2; KEGG: sus:Acid_3734 hypothetical protein; amidohydrolase 2 complement(1391549..1392703) Methylocella silvestris BL2 7091304 YP_002361625.1 CDS Msil_1296 NC_011666.1 1393308 1393619 D KEGG: xau:Xaut_2116 hypothetical protein; hypothetical protein 1393308..1393619 Methylocella silvestris BL2 7091305 YP_002361626.1 CDS Msil_1297 NC_011666.1 1395501 1397216 R PFAM: Carboxylesterase type B; KEGG: sma:SAV433 carboxylesterase; carboxylesterase type B complement(1395501..1397216) Methylocella silvestris BL2 7091306 YP_002361627.1 CDS Msil_1298 NC_011666.1 1397357 1398517 R KEGG: ang:An05g02280 hypothetical protein Pfam: PGAP1 Abhydrolase_1; hypothetical protein complement(1397357..1398517) Methylocella silvestris BL2 7091307 YP_002361628.1 CDS Msil_1301 NC_011666.1 1399434 1399925 R PFAM: PRC-barrel domain protein; KEGG: bpy:Bphyt_5290 PRC-barrel domain protein; PRC-barrel domain-containing protein complement(1399434..1399925) Methylocella silvestris BL2 7091310 YP_002361629.1 CDS Msil_1302 NC_011666.1 1400524 1400835 D KEGG: bid:Bind_1819 hypothetical protein; hypothetical protein 1400524..1400835 Methylocella silvestris BL2 7091312 YP_002361630.1 CDS Msil_1303 NC_011666.1 1400948 1402654 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bid:Bind_1334 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(1400948..1402654) Methylocella silvestris BL2 7091313 YP_002361631.1 CDS Msil_1304 NC_011666.1 1402832 1405009 R KEGG: met:M446_0887 patatin; hypothetical protein complement(1402832..1405009) Methylocella silvestris BL2 7091314 YP_002361632.1 CDS Msil_1305 NC_011666.1 1405148 1405726 R KEGG: rec:RHECIAT_CH0002749 hypothetical protein; hypothetical protein complement(1405148..1405726) Methylocella silvestris BL2 7091315 YP_002361633.1 CDS Msil_1306 NC_011666.1 1405990 1406520 D hypothetical protein 1405990..1406520 Methylocella silvestris BL2 7091316 YP_002361634.1 CDS Msil_1307 NC_011666.1 1406601 1407674 R TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: sus:Acid_4009 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / transcriptional regulator Ada; AraC family transcriptional regulator complement(1406601..1407674) Methylocella silvestris BL2 7091317 YP_002361635.1 CDS Msil_1308 NC_011666.1 1407826 1408869 D PFAM: histone deacetylase superfamily; KEGG: mlo:mlr7469 histone deacetylase; histone deacetylase superfamily protein 1407826..1408869 Methylocella silvestris BL2 7091318 YP_002361636.1 CDS Msil_1309 NC_011666.1 1408932 1409126 D hypothetical protein 1408932..1409126 Methylocella silvestris BL2 7091319 YP_002361637.1 CDS Msil_1310 NC_011666.1 1409123 1409878 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bid:Bind_0178 ABC transporter related; ABC transporter-like protein 1409123..1409878 Methylocella silvestris BL2 7091320 YP_002361638.1 CDS Msil_1311 NC_011666.1 1409875 1410747 D PFAM: ABC-3 protein; KEGG: bid:Bind_0179 ABC-3 protein; ABC-3 protein 1409875..1410747 Methylocella silvestris BL2 7091321 YP_002361639.1 CDS Msil_1312 NC_011666.1 1410768 1411688 D PFAM: periplasmic solute binding protein; KEGG: ret:RHE_CH00971 probable zinc ABC transporter, substrate-binding protein; periplasmic solute binding protein 1410768..1411688 Methylocella silvestris BL2 7091322 YP_002361640.1 CDS Msil_1313 NC_011666.1 1411709 1411939 R KEGG: xau:Xaut_2165 hypothetical protein; hypothetical protein complement(1411709..1411939) Methylocella silvestris BL2 7091323 YP_002361641.1 CDS Msil_1314 NC_011666.1 1412138 1412461 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: gbe:GbCGDNIH1_0477 hypothetical cytosolic protein; antibiotic biosynthesis monooxygenase 1412138..1412461 Methylocella silvestris BL2 7091324 YP_002361642.1 CDS Msil_1315 NC_011666.1 1412532 1415360 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: pol:Bpro_1191 ATPase, E1-E2 type; P-type HAD superfamily ATPase 1412532..1415360 Methylocella silvestris BL2 7091325 YP_002361643.1 CDS Msil_1316 NC_011666.1 1415372 1416193 R PFAM: fatty acid hydroxylase; KEGG: bid:Bind_2044 fatty acid hydroxylase; fatty acid hydroxylase complement(1415372..1416193) Methylocella silvestris BL2 7091326 YP_002361644.1 CDS pyrE NC_011666.1 1416513 1417205 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1416513..1417205 Methylocella silvestris BL2 7091327 YP_002361645.1 CDS Msil_1318 NC_011666.1 1417239 1418303 D PFAM: 2-nitropropane dioxygenase NPD; KEGG: hne:HNE_0476 2-nitropropane dioxygenase family oxidoreductase; 2-nitropropane dioxygenase 1417239..1418303 Methylocella silvestris BL2 7091328 YP_002361646.1 CDS Msil_1319 NC_011666.1 1418306 1418965 R KEGG: bid:Bind_0644 phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthase-like protein; phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein complement(1418306..1418965) Methylocella silvestris BL2 7091329 YP_002361647.1 CDS Msil_1320 NC_011666.1 1419040 1419561 D KEGG: mex:Mext_2792 hypothetical protein; hypothetical protein 1419040..1419561 Methylocella silvestris BL2 7091330 YP_002361648.1 CDS Msil_1321 NC_011666.1 1419584 1420669 R KEGG: rpd:RPD_1710 hypothetical protein; hypothetical protein complement(1419584..1420669) Methylocella silvestris BL2 7091331 YP_002361649.1 CDS Msil_1322 NC_011666.1 1420921 1422069 R KEGG: rpd:RPD_1710 hypothetical protein; hypothetical protein complement(1420921..1422069) Methylocella silvestris BL2 7091332 YP_002361650.1 CDS Msil_1323 NC_011666.1 1422152 1423192 R PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: ccr:CC_1616 hypothetical protein; TrkA-N domain-containing protein complement(1422152..1423192) Methylocella silvestris BL2 7091333 YP_002361651.1 CDS Msil_1324 NC_011666.1 1423426 1423797 R PFAM: protein of unknown function DUF779; KEGG: bid:Bind_2851 protein of unknown function DUF779; hypothetical protein complement(1423426..1423797) Methylocella silvestris BL2 7091334 YP_002361652.1 CDS Msil_1325 NC_011666.1 1423900 1426065 R catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G complement(1423900..1426065) Methylocella silvestris BL2 7091335 YP_002361653.1 CDS Msil_1326 NC_011666.1 1426285 1427577 R PFAM: Fmu (Sun) domain protein; KEGG: bid:Bind_1921 Fmu (Sun) domain protein; Fmu (Sun) domain-containing protein complement(1426285..1427577) Methylocella silvestris BL2 7091336 YP_002361654.1 CDS Msil_1327 NC_011666.1 1427574 1427963 R PFAM: protein of unknown function DUF1123; KEGG: nha:Nham_2544 protein of unknown function DUF1123; hypothetical protein complement(1427574..1427963) Methylocella silvestris BL2 7091337 YP_002361655.1 CDS Msil_1328 NC_011666.1 1428341 1429831 R KEGG: bid:Bind_1923 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase complement(1428341..1429831) Methylocella silvestris BL2 7091338 YP_002361656.1 CDS Msil_1329 NC_011666.1 1430020 1431438 D PFAM: major facilitator superfamily MFS_1; KEGG: bid:Bind_1924 drug resistance transporter, EmrB/QacA subfamily; major facilitator superfamily protein 1430020..1431438 Methylocella silvestris BL2 7093521 YP_002361657.1 CDS Msil_1330 NC_011666.1 1431443 1432156 R PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: bid:Bind_1926 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ complement(1431443..1432156) Methylocella silvestris BL2 7091668 YP_002361658.1 CDS Msil_1331 NC_011666.1 1432153 1433322 R PFAM: Ppx/GppA phosphatase; KEGG: bid:Bind_1927 Ppx/GppA phosphatase; Ppx/GppA phosphatase complement(1432153..1433322) Methylocella silvestris BL2 7091669 YP_002361659.1 CDS Msil_1332 NC_011666.1 1433497 1435971 R PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: rpc:RPC_3182 peptidase C14, caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 complement(1433497..1435971) Methylocella silvestris BL2 7091670 YP_002361660.1 CDS Msil_1333 NC_011666.1 1436167 1436718 R KEGG: bid:Bind_1928 hypothetical protein; hypothetical protein complement(1436167..1436718) Methylocella silvestris BL2 7091671 YP_002361661.1 CDS Msil_1334 NC_011666.1 1436735 1437526 R PFAM: beta-lactamase domain protein; KEGG: xau:Xaut_3325 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein complement(1436735..1437526) Methylocella silvestris BL2 7091672 YP_002361662.1 CDS Msil_1335 NC_011666.1 1437861 1439417 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bid:Bind_1929 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1437861..1439417 Methylocella silvestris BL2 7091673 YP_002361663.1 CDS Msil_1336 NC_011666.1 1439605 1441206 D PFAM: peptidase S10 serine carboxypeptidase; KEGG: bid:Bind_1930 peptidase S10 serine carboxypeptidase; peptidase S10 serine carboxypeptidase 1439605..1441206 Methylocella silvestris BL2 7091674 YP_002361664.1 CDS Msil_1337 NC_011666.1 1441823 1443004 R TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: mms:mma_0008 site-specific DNA methylase; DNA-cytosine methyltransferase complement(1441823..1443004) Methylocella silvestris BL2 7091675 YP_002361665.1 CDS Msil_1338 NC_011666.1 1443088 1444113 R KEGG: bid:Bind_2029 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(1443088..1444113) Methylocella silvestris BL2 7091676 YP_002361666.1 CDS Msil_1339 NC_011666.1 1444485 1444733 D hypothetical protein 1444485..1444733 Methylocella silvestris BL2 7091677 YP_002361667.1 CDS Msil_1340 NC_011666.1 1444792 1445583 D TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: bid:Bind_2697 cobalamin 5'-phosphate synthase; cobalamin 5'-phosphate synthase 1444792..1445583 Methylocella silvestris BL2 7091678 YP_002361668.1 CDS Msil_1341 NC_011666.1 1445590 1446843 R PFAM: Peptidoglycan-binding LysM; Peptidase M23; KEGG: bid:Bind_2699 peptidase M23; peptidase M23 complement(1445590..1446843) Methylocella silvestris BL2 7091679 YP_002361669.1 CDS Msil_1342 NC_011666.1 1446976 1447680 R PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: bid:Bind_2700 protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(1446976..1447680) Methylocella silvestris BL2 7091680 YP_002361670.1 CDS Msil_1343 NC_011666.1 1447861 1448193 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: gbe:GbCGDNIH1_0637 DNA-binding protein; alkylhydroperoxidase complement(1447861..1448193) Methylocella silvestris BL2 7091681 YP_002361671.1 CDS Msil_1344 NC_011666.1 1448280 1448897 D PFAM: regulatory protein TetR; KEGG: mpo:Mpop_1734 transcriptional regulator, TetR family; TetR family transcriptional regulator 1448280..1448897 Methylocella silvestris BL2 7091682 YP_002361672.1 CDS Msil_1345 NC_011666.1 1448957 1449715 R KEGG: mex:Mext_4233 stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; stationary-phase survival protein SurE complement(1448957..1449715) Methylocella silvestris BL2 7091683 YP_002361673.1 CDS Msil_1346 NC_011666.1 1449913 1450821 R PFAM: Domain of unknown function DUF1849; KEGG: bid:Bind_1791 protein of unknown function DUF1849; hypothetical protein complement(1449913..1450821) Methylocella silvestris BL2 7091684 YP_002361674.1 CDS Msil_1347 NC_011666.1 1451434 1452399 D KEGG: bfs:BF1559 hypothetical protein; hypothetical protein 1451434..1452399 Methylocella silvestris BL2 7091685 YP_002361675.1 CDS Msil_1348 NC_011666.1 1452521 1452994 D PFAM: Endoribonuclease L-PSP; KEGG: bid:Bind_1792 endoribonuclease L-PSP; endoribonuclease L-PSP 1452521..1452994 Methylocella silvestris BL2 7091686 YP_002361676.1 CDS Msil_1349 NC_011666.1 1453004 1453771 D PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bid:Bind_1793 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 1453004..1453771 Methylocella silvestris BL2 7091687 YP_002361677.1 CDS Msil_1350 NC_011666.1 1454056 1455237 D KEGG: bpl:BURPS1106A_A2411 hypothetical protein; hypothetical protein 1454056..1455237 Methylocella silvestris BL2 7091688 YP_002361678.1 CDS Msil_1351 NC_011666.1 1455467 1456504 R PFAM: fatty acid desaturase; Sphingolipid delta4-desaturase DES; KEGG: bid:Bind_0284 fatty acid desaturase; fatty acid desaturase complement(1455467..1456504) Methylocella silvestris BL2 7091689 YP_002361679.1 CDS Msil_1352 NC_011666.1 1456700 1457872 R KEGG: bid:Bind_3011 hypothetical protein; hypothetical protein complement(1456700..1457872) Methylocella silvestris BL2 7091690 YP_002361680.1 CDS Msil_1353 NC_011666.1 1458000 1459229 R PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: bid:Bind_3012 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase complement(1458000..1459229) Methylocella silvestris BL2 7091691 YP_002361681.1 CDS Msil_1354 NC_011666.1 1459673 1460851 D KEGG: met:M446_4265 hypothetical protein; hypothetical protein 1459673..1460851 Methylocella silvestris BL2 7091692 YP_002361682.1 CDS Msil_1355 NC_011666.1 1460844 1461779 D KEGG: met:M446_4266 hypothetical protein; hypothetical protein 1460844..1461779 Methylocella silvestris BL2 7091693 YP_002361683.1 CDS Msil_1356 NC_011666.1 1461784 1463223 D KEGG: met:M446_4267 hypothetical protein; hypothetical protein 1461784..1463223 Methylocella silvestris BL2 7091694 YP_002361684.1 CDS Msil_1357 NC_011666.1 1463249 1464220 D hypothetical protein 1463249..1464220 Methylocella silvestris BL2 7091695 YP_002361685.1 CDS Msil_1358 NC_011666.1 1464397 1464633 D hypothetical protein 1464397..1464633 Methylocella silvestris BL2 7091696 YP_002361686.1 CDS Msil_1359 NC_011666.1 1464696 1465802 R PFAM: sodium/calcium exchanger membrane region; KEGG: ret:RHE_CH03728 putative Ca2+/H+ antiporter protein; sodium/calcium exchanger membrane protein complement(1464696..1465802) Methylocella silvestris BL2 7091697 YP_002361687.1 CDS Msil_1360 NC_011666.1 1465855 1469298 R biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase complement(1465855..1469298) Methylocella silvestris BL2 7091698 YP_002361688.1 CDS Msil_1361 NC_011666.1 1469441 1470451 D SMART: nuclease (SNase domain protein); KEGG: bid:Bind_3161 nuclease (SNase domain protein); nuclease 1469441..1470451 Methylocella silvestris BL2 7091699 YP_002361689.1 CDS Msil_1362 NC_011666.1 1470470 1472020 D PFAM: peptidase M48 Ste24p; KEGG: bid:Bind_3160 peptidase M48 Ste24p; peptidase M48 Ste24p 1470470..1472020 Methylocella silvestris BL2 7091700 YP_002361690.1 CDS Msil_1363 NC_011666.1 1472144 1474261 D PFAM: carbon starvation protein CstA; KEGG: rpd:RPD_1551 carbon starvation protein CstA; carbon starvation protein CstA 1472144..1474261 Methylocella silvestris BL2 7091701 YP_002361691.1 CDS Msil_1364 NC_011666.1 1474258 1474467 D PFAM: protein of unknown function DUF466; KEGG: rpd:RPD_1552 hypothetical protein; hypothetical protein 1474258..1474467 Methylocella silvestris BL2 7091702 YP_002361692.1 CDS Msil_1365 NC_011666.1 1474800 1475018 D hypothetical protein 1474800..1475018 Methylocella silvestris BL2 7091703 YP_002361693.1 CDS Msil_1366 NC_011666.1 1475339 1476595 D PFAM: monooxygenase FAD-binding; KEGG: mxa:MXAN_6265 hypothetical protein; hypothetical protein 1475339..1476595 Methylocella silvestris BL2 7091704 YP_002361694.1 CDS Msil_1367 NC_011666.1 1477061 1478671 D PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bid:Bind_0357 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 1477061..1478671 Methylocella silvestris BL2 7091705 YP_002361695.1 CDS Msil_1368 NC_011666.1 1478668 1479894 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bid:Bind_0359 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K 1478668..1479894 Methylocella silvestris BL2 7091706 YP_002361696.1 CDS Msil_1369 NC_011666.1 1479978 1480292 D PFAM: RNA-binding S4 domain protein; KEGG: bid:Bind_3135 RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 1479978..1480292 Methylocella silvestris BL2 7091707 YP_002361697.1 CDS Msil_1370 NC_011666.1 1480492 1480830 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bja:bll0157 ferredoxin; 4Fe-4S ferredoxin 1480492..1480830 Methylocella silvestris BL2 7091708 YP_002361698.1 CDS Msil_1371 NC_011666.1 1481318 1482688 D PFAM: transcription factor CarD; KEGG: bid:Bind_3138 transcriptional regulator, CarD family; CarD family transcriptional regulator 1481318..1482688 Methylocella silvestris BL2 7091709 YP_002361699.1 CDS Msil_1372 NC_011666.1 1482890 1483288 D KEGG: mrd:Mrad2831_3162 heat shock protein HSP20; heat shock protein HSP20 1482890..1483288 Methylocella silvestris BL2 7091710 YP_002361700.1 CDS Msil_1373 NC_011666.1 1483327 1483593 D PFAM: protein of unknown function DUF1150; KEGG: bid:Bind_0513 protein of unknown function DUF1150; hypothetical protein 1483327..1483593 Methylocella silvestris BL2 7091711 YP_002361701.1 CDS Msil_1374 NC_011666.1 1483943 1484713 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bid:Bind_2742 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1483943..1484713 Methylocella silvestris BL2 7091712 YP_002361702.1 CDS Msil_1375 NC_011666.1 1485026 1486636 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 1485026..1486636 Methylocella silvestris BL2 7091713 YP_002361703.1 CDS Msil_1376 NC_011666.1 1486719 1488305 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(1486719..1488305) Methylocella silvestris BL2 7091714 YP_002361704.1 CDS Msil_1377 NC_011666.1 1488627 1489214 R KEGG: mex:Mext_4366 hypothetical protein; hypothetical protein complement(1488627..1489214) Methylocella silvestris BL2 7091715 YP_002361705.1 CDS Msil_1378 NC_011666.1 1489423 1490337 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_4365 helix-turn-helix-domain containing protein AraC type; AraC family transcriptional regulator 1489423..1490337 Methylocella silvestris BL2 7091716 YP_002361706.1 CDS Msil_1379 NC_011666.1 1490474 1490923 R PFAM: regulatory protein MarR; KEGG: cak:Caul_1741 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(1490474..1490923) Methylocella silvestris BL2 7091717 YP_002361707.1 CDS Msil_1380 NC_011666.1 1490978 1492096 D PFAM: monooxygenase FAD-binding; KEGG: sco:SCO7705 oxidoreductase; monooxygenase 1490978..1492096 Methylocella silvestris BL2 7091718 YP_002361708.1 CDS Msil_1381 NC_011666.1 1492311 1493486 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase complement(1492311..1493486) Methylocella silvestris BL2 7091719 YP_002361709.1 CDS Msil_1382 NC_011666.1 1493788 1495038 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 1493788..1495038 Methylocella silvestris BL2 7091720 YP_002361710.1 CDS Msil_1383 NC_011666.1 1495112 1495621 D KEGG: bid:Bind_3144 hypothetical protein; hypothetical protein 1495112..1495621 Methylocella silvestris BL2 7091721 YP_002361711.1 CDS Msil_1384 NC_011666.1 1495648 1496664 R TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: bid:Bind_3142 UreA amidolyase related protein; urea amidolyase-like protein complement(1495648..1496664) Methylocella silvestris BL2 7091722 YP_002361712.1 CDS Msil_1385 NC_011666.1 1496657 1497385 R PFAM: Allophanate hydrolase subunit 1; KEGG: bid:Bind_3141 allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 complement(1496657..1497385) Methylocella silvestris BL2 7091723 YP_002361713.1 CDS Msil_1386 NC_011666.1 1497396 1498196 R PFAM: LamB/YcsF family protein; KEGG: bid:Bind_3140 LamB/YcsF family protein; LamB/YcsF family protein complement(1497396..1498196) Methylocella silvestris BL2 7091724 YP_002361714.1 CDS Msil_1387 NC_011666.1 1498354 1499091 R KEGG: bid:Bind_0091 hypothetical protein; hypothetical protein complement(1498354..1499091) Methylocella silvestris BL2 7091725 YP_002361715.1 CDS Msil_1388 NC_011666.1 1499322 1499951 D KEGG: bid:Bind_3214 hypothetical protein; hypothetical protein 1499322..1499951 Methylocella silvestris BL2 7091726 YP_002361716.1 CDS Msil_1389 NC_011666.1 1500002 1500502 R KEGG: gvi:glr0868 unknown protein; hypothetical protein complement(1500002..1500502) Methylocella silvestris BL2 7091727 YP_002361717.1 CDS Msil_1390 NC_011666.1 1500581 1502035 R PFAM: HWE histidine kinase; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: bid:Bind_3090 signal transduction histidine kinase; signal transduction histidine kinase complement(1500581..1502035) Methylocella silvestris BL2 7091728 YP_002361718.1 CDS Msil_1391 NC_011666.1 1502422 1505463 D KEGG: bid:Bind_2744 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; DNA polymerase I 1502422..1505463 Methylocella silvestris BL2 7091729 YP_002361719.1 CDS Msil_1392 NC_011666.1 1505926 1506156 D hypothetical protein 1505926..1506156 Methylocella silvestris BL2 7091730 YP_002361720.1 CDS Msil_1393 NC_011666.1 1506161 1506421 D hypothetical protein 1506161..1506421 Methylocella silvestris BL2 7091731 YP_002361721.1 CDS Msil_1394 NC_011666.1 1506439 1507320 R KEGG: mca:MCA2306 tRNA nucleotidyltransferase/poly(A) polymerase family protein; tRNA nucleotidyltransferase/poly(A) polymerase family protein complement(1506439..1507320) Methylocella silvestris BL2 7091732 YP_002361722.1 CDS fadB NC_011666.1 1507330 1509477 R includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha complement(1507330..1509477) Methylocella silvestris BL2 7091733 YP_002361723.1 CDS Msil_1396 NC_011666.1 1509540 1511153 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bid:Bind_3465 ABC transporter related; ABC transporter-like protein complement(1509540..1511153) Methylocella silvestris BL2 7091734 YP_002361724.1 CDS Msil_1397 NC_011666.1 1511150 1512259 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bid:Bind_3464 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1511150..1512259) Methylocella silvestris BL2 7091735 YP_002361725.1 CDS Msil_1398 NC_011666.1 1512256 1513197 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bid:Bind_3463 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1512256..1513197) Methylocella silvestris BL2 7091736 YP_002361726.1 CDS Msil_1399 NC_011666.1 1513259 1513384 R hypothetical protein complement(1513259..1513384) Methylocella silvestris BL2 7091737 YP_002361727.1 CDS Msil_1400 NC_011666.1 1513548 1513970 R PFAM: PilT protein domain protein; KEGG: rpe:RPE_4137 PilT protein domain protein; PilT protein domain-containing protein complement(1513548..1513970) Methylocella silvestris BL2 7091738 YP_002361728.1 CDS Msil_1401 NC_011666.1 1513972 1514232 R TIGRFAM: prevent-host-death family protein; KEGG: rpe:RPE_4136 prevent-host-death family protein; prevent-host-death family protein complement(1513972..1514232) Methylocella silvestris BL2 7091739 YP_002361729.1 CDS trpA NC_011666.1 1514419 1515267 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1514419..1515267 Methylocella silvestris BL2 7091740 YP_002361730.1 CDS Msil_1403 NC_011666.1 1515429 1516295 D TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: bid:Bind_1987 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta 1515429..1516295 Methylocella silvestris BL2 7091741 YP_002361731.1 CDS Msil_1404 NC_011666.1 1516319 1517635 D KEGG: bid:Bind_1986 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 1516319..1517635 Methylocella silvestris BL2 7091742 YP_002361732.1 CDS Msil_1405 NC_011666.1 1517701 1518678 D KEGG: mpo:Mpop_3704 hypothetical protein; hypothetical protein 1517701..1518678 Methylocella silvestris BL2 7091743 YP_002361733.1 CDS Msil_1406 NC_011666.1 1518718 1520481 D KEGG: met:M446_3645 glucose/sorbosone dehydrogenase-like protein; glucose/sorbosone dehydrogenase-like protein 1518718..1520481 Methylocella silvestris BL2 7091744 YP_002361734.1 CDS Msil_1407 NC_011666.1 1520484 1521479 R catalyzes the formation of glutamate from glutamine; glutaminase complement(1520484..1521479) Methylocella silvestris BL2 7091745 YP_002361735.1 CDS Msil_1408 NC_011666.1 1521476 1522384 R PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: gbe:GbCGDNIH1_0484 transglutaminase-like protein; transglutaminase domain-containing protein complement(1521476..1522384) Methylocella silvestris BL2 7091746 YP_002361736.1 CDS Msil_1409 NC_011666.1 1522506 1522862 R TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: bid:Bind_2178 queuosine biosynthesis protein QueD; queuosine biosynthesis protein QueD complement(1522506..1522862) Methylocella silvestris BL2 7091747 YP_002361737.1 CDS Msil_1410 NC_011666.1 1522880 1523515 R KEGG: bid:Bind_2177 radical SAM domain protein; radical SAM domain-containing protein complement(1522880..1523515) Methylocella silvestris BL2 7091748 YP_002361738.1 CDS Msil_1411 NC_011666.1 1523652 1523975 R TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bid:Bind_2176 thioredoxin; thioredoxin complement(1523652..1523975) Methylocella silvestris BL2 7092321 YP_002361739.1 CDS Msil_1412 NC_011666.1 1524075 1527530 R TIGRFAM: double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; KEGG: bid:Bind_2175 double-strand break repair helicase AddA; double-strand break repair helicase AddA complement(1524075..1527530) Methylocella silvestris BL2 7091752 YP_002361740.1 CDS Msil_1413 NC_011666.1 1527530 1530661 R TIGRFAM: double-strand break repair protein AddB; KEGG: bid:Bind_2174 double-strand break repair protein AddB; double-strand break repair protein AddB complement(1527530..1530661) Methylocella silvestris BL2 7091753 YP_002361741.1 CDS Msil_1414 NC_011666.1 1531004 1532023 D TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: bid:Bind_2166 glycine oxidase ThiO; glycine oxidase ThiO 1531004..1532023 Methylocella silvestris BL2 7091754 YP_002361742.1 CDS Msil_1415 NC_011666.1 1531992 1532189 D TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: bid:Bind_2165 thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 1531992..1532189 Methylocella silvestris BL2 7091755 YP_002361743.1 CDS Msil_1416 NC_011666.1 1532191 1532988 D PFAM: thiazole biosynthesis family protein; KEGG: bid:Bind_2164 thiazole biosynthesis family protein; thiazole biosynthesis family protein 1532191..1532988 Methylocella silvestris BL2 7091756 YP_002361744.1 CDS Msil_1417 NC_011666.1 1532999 1533625 D KEGG: bid:Bind_2163 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 1532999..1533625 Methylocella silvestris BL2 7091757 YP_002361745.1 CDS Msil_1418 NC_011666.1 1533654 1535222 R PFAM: transcriptional regulator domain protein; KEGG: met:M446_5608 transcriptional regulator, CadC; transcriptional regulator domain-containing protein complement(1533654..1535222) Methylocella silvestris BL2 7091758 YP_002361746.1 CDS Msil_1419 NC_011666.1 1535516 1535740 D PFAM: 4-oxalocrotonate tautomerase; KEGG: sus:Acid_3767 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 1535516..1535740 Methylocella silvestris BL2 7091759 YP_002361747.1 CDS Msil_1420 NC_011666.1 1535832 1537148 D PFAM: major facilitator superfamily MFS_1; KEGG: mrd:Mrad2831_1648 major facilitator superfamily MFS_1; major facilitator superfamily protein 1535832..1537148 Methylocella silvestris BL2 7091760 YP_002361748.1 CDS Msil_1421 NC_011666.1 1537285 1537851 D KEGG: bmb:BruAb2_0400 hypothetical protein; hypothetical protein 1537285..1537851 Methylocella silvestris BL2 7091761 YP_002361749.1 CDS Msil_1422 NC_011666.1 1537823 1538548 D KEGG: ccr:CC_3514 hypothetical protein; hypothetical protein 1537823..1538548 Methylocella silvestris BL2 7091762 YP_002361750.1 CDS Msil_1423 NC_011666.1 1538567 1540276 R PFAM: Heparinase II/III family protein; KEGG: bid:Bind_2070 heparinase II/III family protein; heparinase II/III family protein complement(1538567..1540276) Methylocella silvestris BL2 7091763 YP_002361751.1 CDS Msil_1424 NC_011666.1 1540440 1541786 R TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: bid:Bind_2071 sun protein; sun protein complement(1540440..1541786) Methylocella silvestris BL2 7091764 YP_002361752.1 CDS Msil_1425 NC_011666.1 1542091 1542387 D PFAM: protein of unknown function DUF1674; KEGG: bid:Bind_2072 protein of unknown function DUF1674; hypothetical protein 1542091..1542387 Methylocella silvestris BL2 7091765 YP_002361753.1 CDS pheS NC_011666.1 1542397 1543479 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(1542397..1543479) Methylocella silvestris BL2 7091766 YP_002361754.1 CDS Msil_1427 NC_011666.1 1543606 1545420 R PFAM: creatinase; peptidase M24; KEGG: bid:Bind_2159 peptidase M24; peptidase M24 complement(1543606..1545420) Methylocella silvestris BL2 7091767 YP_002361755.1 CDS Msil_1428 NC_011666.1 1545477 1545971 R KEGG: azc:AZC_3150 hypothetical protein; hypothetical protein complement(1545477..1545971) Methylocella silvestris BL2 7091768 YP_002361756.1 CDS Msil_1429 NC_011666.1 1546054 1547343 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(1546054..1547343) Methylocella silvestris BL2 7091769 YP_002361757.1 CDS Msil_1430 NC_011666.1 1547478 1547714 R hypothetical protein complement(1547478..1547714) Methylocella silvestris BL2 7091770 YP_002361758.1 CDS Msil_1432 NC_011666.1 1549230 1549556 R hypothetical protein complement(1549230..1549556) Methylocella silvestris BL2 7091773 YP_002361759.1 CDS Msil_1433 NC_011666.1 1550370 1551557 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bid:Bind_0922 radical SAM domain protein; radical SAM protein 1550370..1551557 Methylocella silvestris BL2 7091774 YP_002361760.1 CDS Msil_1434 NC_011666.1 1551613 1553652 D TIGRFAM: excinuclease ABC, C subunit; PFAM: Excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: bid:Bind_1712 excinuclease ABC, C subunit; excinuclease ABC subunit C 1551613..1553652 Methylocella silvestris BL2 7091775 YP_002361761.1 CDS Msil_1435 NC_011666.1 1553732 1554328 D TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bid:Bind_1713 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 1553732..1554328 Methylocella silvestris BL2 7091776 YP_002361762.1 CDS Msil_1436 NC_011666.1 1554366 1554617 D TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: rpb:RPB_1175 molybdopterin converting factor, subunit 1; molybdopterin converting factor subunit 1 1554366..1554617 Methylocella silvestris BL2 7091777 YP_002361763.1 CDS Msil_1437 NC_011666.1 1554632 1555141 D PFAM: molybdopterin biosynthesis MoaE protein; KEGG: mlo:mlr7915 molybdopterin converting factor, subunit 2; molybdopterin biosynthesis MoaE protein 1554632..1555141 Methylocella silvestris BL2 7091778 YP_002361764.1 CDS Msil_1438 NC_011666.1 1555146 1556489 R PFAM: major facilitator superfamily MFS_1; KEGG: atc:AGR_C_3872 hypothetical protein; major facilitator superfamily protein complement(1555146..1556489) Methylocella silvestris BL2 7091779 YP_002361765.1 CDS Msil_1439 NC_011666.1 1556591 1557628 R hypothetical protein complement(1556591..1557628) Methylocella silvestris BL2 7091780 YP_002361766.1 CDS Msil_1440 NC_011666.1 1557856 1558257 R KEGG: bid:Bind_3629 hypothetical protein; hypothetical protein complement(1557856..1558257) Methylocella silvestris BL2 7091781 YP_002361767.1 CDS Msil_1441 NC_011666.1 1558388 1558963 R stimulates methylation of MCP proteins; PFAM: CheD family protein; KEGG: bid:Bind_3628 CheD; protein CheD complement(1558388..1558963) Methylocella silvestris BL2 7091782 YP_002361768.1 CDS Msil_1442 NC_011666.1 1558960 1559349 R PFAM: response regulator receiver; KEGG: bid:Bind_3627 response regulator receiver protein; response regulator receiver protein complement(1558960..1559349) Methylocella silvestris BL2 7091783 YP_002361769.1 CDS Msil_1443 NC_011666.1 1559390 1560415 R regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase complement(1559390..1560415) Methylocella silvestris BL2 7091784 YP_002361770.1 CDS Msil_1444 NC_011666.1 1560412 1561314 R PFAM: MCP methyltransferase CheR-type; KEGG: bid:Bind_3625 MCP methyltransferase, CheR-type; CheR-type MCP methyltransferase complement(1560412..1561314) Methylocella silvestris BL2 7091785 YP_002361771.1 CDS Msil_1445 NC_011666.1 1561311 1561796 R PFAM: CheW domain protein; KEGG: bid:Bind_3624 CheW protein; CheW protein complement(1561311..1561796) Methylocella silvestris BL2 7091786 YP_002361772.1 CDS Msil_1446 NC_011666.1 1561801 1564083 R PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: bid:Bind_3623 CheA signal transduction histidine kinase; CheA signal transduction histidine kinase complement(1561801..1564083) Methylocella silvestris BL2 7091787 YP_002361773.1 CDS Msil_1447 NC_011666.1 1564156 1564521 R PFAM: response regulator receiver; KEGG: bid:Bind_3622 response regulator receiver protein; response regulator receiver protein complement(1564156..1564521) Methylocella silvestris BL2 7091788 YP_002361774.1 CDS Msil_1448 NC_011666.1 1564518 1564853 R KEGG: bid:Bind_3621 hypothetical protein; hypothetical protein complement(1564518..1564853) Methylocella silvestris BL2 7091789 YP_002361775.1 CDS Msil_1449 NC_011666.1 1564853 1566796 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bid:Bind_3620 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1564853..1566796) Methylocella silvestris BL2 7091790 YP_002361776.1 CDS Msil_1450 NC_011666.1 1567623 1568411 D KEGG: bid:Bind_3044 hypothetical protein; hypothetical protein 1567623..1568411 Methylocella silvestris BL2 7091791 YP_002361777.1 CDS Msil_1452 NC_011666.1 1570005 1570853 R PFAM: UspA domain protein; KEGG: rpb:RPB_1732 UspA; UspA domain-containing protein complement(1570005..1570853) Methylocella silvestris BL2 7091795 YP_002361778.1 CDS Msil_1453 NC_011666.1 1570961 1572403 R TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: bid:Bind_1725 type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein complement(1570961..1572403) Methylocella silvestris BL2 7091796 YP_002361779.1 CDS Msil_1454 NC_011666.1 1572487 1575636 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bbr:BB2528 acriflavine resistance protein B; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(1572487..1575636) Methylocella silvestris BL2 7091797 YP_002361780.1 CDS Msil_1455 NC_011666.1 1575648 1576859 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: spe:Spro_1127 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit complement(1575648..1576859) Methylocella silvestris BL2 7091798 YP_002361781.1 CDS Msil_1456 NC_011666.1 1577073 1577708 D PFAM: regulatory protein TetR; KEGG: acr:Acry_0093 transcriptional regulator, TetR family; TetR family transcriptional regulator 1577073..1577708 Methylocella silvestris BL2 7091799 YP_002361782.1 CDS Msil_1458 NC_011666.1 1578328 1579116 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: ajs:Ajs_0448 IclR family transcriptional regulator; IclR family transcriptional regulator complement(1578328..1579116) Methylocella silvestris BL2 7091801 YP_002361783.1 CDS Msil_1460 NC_011666.1 1579605 1579955 D KEGG: swi:Swit_3421 hypothetical protein; hypothetical protein 1579605..1579955 Methylocella silvestris BL2 7091803 YP_002361784.1 CDS Msil_1462 NC_011666.1 1580742 1581614 R KEGG: xau:Xaut_4179 hypothetical protein; hypothetical protein complement(1580742..1581614) Methylocella silvestris BL2 7091805 YP_002361785.1 CDS Msil_1463 NC_011666.1 1582885 1584681 R PFAM: monooxygenase FAD-binding; KEGG: swi:Swit_3045 monooxygenase, FAD-binding; monooxygenase complement(1582885..1584681) Methylocella silvestris BL2 7091806 YP_002361786.1 CDS Msil_1464 NC_011666.1 1584715 1585554 R PFAM: alpha/beta hydrolase fold; KEGG: swi:Swit_4895 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(1584715..1585554) Methylocella silvestris BL2 7091807 YP_002361787.1 CDS Msil_1465 NC_011666.1 1585603 1586490 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: swi:Swit_3046 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(1585603..1586490) Methylocella silvestris BL2 7091808 YP_002361788.1 CDS Msil_1467 NC_011666.1 1587886 1588209 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: pna:Pnap_2486 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 1587886..1588209 Methylocella silvestris BL2 7091810 YP_002361789.1 CDS Msil_1468 NC_011666.1 1588235 1589476 D PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: nar:Saro_3868 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein 1588235..1589476 Methylocella silvestris BL2 7091811 YP_002361790.1 CDS Msil_1469 NC_011666.1 1589485 1589961 D PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: nar:Saro_3860 aromatic-ring-hydroxylating dioxygenase, beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta 1589485..1589961 Methylocella silvestris BL2 7091812 YP_002361791.1 CDS Msil_1470 NC_011666.1 1590077 1591300 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: smd:Smed_5005 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1590077..1591300 Methylocella silvestris BL2 7091813 YP_002361792.1 CDS Msil_1471 NC_011666.1 1591376 1592359 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: azo:azo1945 putative AraC-family transcriptional regulator; AraC family transcriptional regulator 1591376..1592359 Methylocella silvestris BL2 7091814 YP_002361793.1 CDS Msil_1473 NC_011666.1 1592816 1593169 D PFAM: ferredoxin; KEGG: mpt:Mpe_A3312 hypothetical protein; ferredoxin 1592816..1593169 Methylocella silvestris BL2 7091816 YP_002361794.1 CDS Msil_1474 NC_011666.1 1593182 1594102 D TIGRFAM: catechol 2,3 dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nar:Saro_3857 glyoxalase/bleomycin resistance protein/dioxygenase; catechol 2,3 dioxygenase 1593182..1594102 Methylocella silvestris BL2 7091817 YP_002361795.1 CDS Msil_1475 NC_011666.1 1594103 1594540 D PFAM: protein of unknown function DUF336; KEGG: vei:Veis_2788 protein of unknown function DUF336; hypothetical protein 1594103..1594540 Methylocella silvestris BL2 7091818 YP_002361796.1 CDS Msil_1476 NC_011666.1 1594630 1596144 D TIGRFAM: 2-hydroxymuconic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: dar:Daro_2775 aldehyde dehydrogenase; 2-hydroxymuconic semialdehyde dehydrogenase 1594630..1596144 Methylocella silvestris BL2 7091819 YP_002361797.1 CDS Msil_1477 NC_011666.1 1596182 1596976 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ppf:Pput_2875 4-oxalocrotonate decarboxylase; 4-oxalocrotonate decarboxylase 1596182..1596976 Methylocella silvestris BL2 7091820 YP_002361798.1 CDS Msil_1478 NC_011666.1 1596976 1597917 D catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase 1596976..1597917 Methylocella silvestris BL2 7091821 YP_002361799.1 CDS Msil_1479 NC_011666.1 1597917 1598957 D TIGRFAM: 4-hydroxy-2-oxovalerate aldolase; PFAM: pyruvate carboxyltransferase; DmpG communication domain protein; KEGG: xau:Xaut_0938 pyruvate carboxyltransferase; 4-hydroxy-2-oxovalerate aldolase 1597917..1598957 Methylocella silvestris BL2 7091822 YP_002361800.1 CDS Msil_1480 NC_011666.1 1598954 1599718 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: nar:Saro_3851 hydratase/decarboxylase; 4-oxalocrotonate decarboxylase 1598954..1599718 Methylocella silvestris BL2 7091823 YP_002361801.1 CDS Msil_1481 NC_011666.1 1599722 1599919 D PFAM: 4-oxalocrotonate tautomerase; KEGG: nar:Saro_3850 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 1599722..1599919 Methylocella silvestris BL2 7091824 YP_002361802.1 CDS Msil_1482 NC_011666.1 1600020 1600595 D hypothetical protein 1600020..1600595 Methylocella silvestris BL2 7091825 YP_002361803.1 CDS Msil_1485 NC_011666.1 1601983 1603191 R PFAM: conjugation TrbI family protein; KEGG: bja:bll8279 conjugal transfer protein; conjugation TrbI family protein complement(1601983..1603191) Methylocella silvestris BL2 7091828 YP_002361804.1 CDS Msil_1487 NC_011666.1 1604282 1604962 R PFAM: Conjugal transfer protein; KEGG: cak:Caul_3834 conjugal transfer protein; conjugal transfer protein TrbF complement(1604282..1604962) Methylocella silvestris BL2 7091830 YP_002361805.1 CDS Msil_1488 NC_011666.1 1604962 1605174 R KEGG: mlo:mll9606 conjugal transfer protein; TrbL; conjugal transfer protein TrbL complement(1604962..1605174) Methylocella silvestris BL2 7091831 YP_002361806.1 CDS Msil_1489 NC_011666.1 1605400 1606128 R PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: smd:Smed_6518 IstB domain protein ATP-binding protein; IstB domain-containing protein ATP-binding protein complement(1605400..1606128) Methylocella silvestris BL2 7091832 YP_002361807.1 CDS Msil_1492 NC_011666.1 1608112 1611891 R KEGG: bja:bll8142 hypothetical protein; hypothetical protein complement(1608112..1611891) Methylocella silvestris BL2 7091998 YP_002361808.1 CDS Msil_1493 NC_011666.1 1611895 1612755 R hypothetical protein complement(1611895..1612755) Methylocella silvestris BL2 7091999 YP_002361809.1 CDS Msil_1494 NC_011666.1 1613169 1613861 R KEGG: gdi:GDI2840 putative integrase; hypothetical protein complement(1613169..1613861) Methylocella silvestris BL2 7092000 YP_002361810.1 CDS Msil_1495 NC_011666.1 1613912 1614178 R PFAM: transposase IS3/IS911 family protein; KEGG: gdi:GDI2839 putative transposase; transposase IS3/IS911 family protein complement(1613912..1614178) Methylocella silvestris BL2 7092001 YP_002361811.1 CDS Msil_1498 NC_011666.1 1618134 1619291 R KEGG: mmi:MMAR_5294 PE-PGRS family protein; hypothetical protein complement(1618134..1619291) Methylocella silvestris BL2 7092004 YP_002361812.1 CDS Msil_1499 NC_011666.1 1619427 1619993 R PFAM: isochorismatase hydrolase; KEGG: mag:amb1386 nicotinamidase-like amidase; isochorismatase hydrolase complement(1619427..1619993) Methylocella silvestris BL2 7092005 YP_002361813.1 CDS Msil_1500 NC_011666.1 1620210 1620959 D PFAM: protein of unknown function DUF81; KEGG: rsp:RSP_1646 transmembrane protein; hypothetical protein 1620210..1620959 Methylocella silvestris BL2 7092006 YP_002361814.1 CDS Msil_1502 NC_011666.1 1621685 1622893 D KEGG: bid:Bind_0451 ceramide glucosyltransferase; ceramide glucosyltransferase 1621685..1622893 Methylocella silvestris BL2 7092008 YP_002361815.1 CDS Msil_1503 NC_011666.1 1622964 1623470 R KEGG: swi:Swit_3158 hypothetical protein; hypothetical protein complement(1622964..1623470) Methylocella silvestris BL2 7092009 YP_002361816.1 CDS Msil_1504 NC_011666.1 1623535 1623831 R KEGG: gdi:GDI3845 hypothetical protein; hypothetical protein complement(1623535..1623831) Methylocella silvestris BL2 7092010 YP_002361817.1 CDS Msil_1505 NC_011666.1 1623824 1624144 R KEGG: mrd:Mrad2831_2587 hypothetical protein; hypothetical protein complement(1623824..1624144) Methylocella silvestris BL2 7092011 YP_002361818.1 CDS Msil_1506 NC_011666.1 1624154 1624945 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mmr:Mmar10_2702 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(1624154..1624945) Methylocella silvestris BL2 7092012 YP_002361819.1 CDS Msil_1507 NC_011666.1 1624949 1625650 R KEGG: met:M446_5681 respiratory nitrate reductase, gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit; respiratory nitrate reductase subunit gamma complement(1624949..1625650) Methylocella silvestris BL2 7092013 YP_002361820.1 CDS Msil_1508 NC_011666.1 1625647 1626354 R TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: azc:AZC_1427 nitrate reductase delta subunit protein; nitrate reductase molybdenum cofactor assembly chaperone complement(1625647..1626354) Methylocella silvestris BL2 7092014 YP_002361821.1 CDS Msil_1509 NC_011666.1 1626354 1627868 R TIGRFAM: nitrate reductase, beta subunit; KEGG: mrd:Mrad2831_2591 nitrate reductase, beta subunit; nitrate reductase subunit beta complement(1626354..1627868) Methylocella silvestris BL2 7092015 YP_002361822.1 CDS Msil_1510 NC_011666.1 1627865 1631599 R TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: azc:AZC_1425 nitrate reductase alpha subunit protein; nitrate reductase subunit alpha complement(1627865..1631599) Methylocella silvestris BL2 7092016 YP_002361823.1 CDS Msil_1511 NC_011666.1 1631784 1632593 D PFAM: cyclic nucleotide-binding; KEGG: mrd:Mrad2831_2595 transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 1631784..1632593 Methylocella silvestris BL2 7092017 YP_002361824.1 CDS Msil_1512 NC_011666.1 1632590 1635343 D TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: hne:HNE_1559 nitrite extrusion protein; nitrite transporter 1632590..1635343 Methylocella silvestris BL2 7092018 YP_002361825.1 CDS Msil_1513 NC_011666.1 1635673 1636227 D PFAM: cytochrome c oxidase subunit III; KEGG: pde:Pden_2480 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 1635673..1636227 Methylocella silvestris BL2 7092019 YP_002361826.1 CDS Msil_1514 NC_011666.1 1636232 1636642 D hypothetical protein 1636232..1636642 Methylocella silvestris BL2 7092020 YP_002361827.1 CDS Msil_1515 NC_011666.1 1636667 1637119 D KEGG: rpe:RPE_0622 nitric-oxide reductase; nitric-oxide reductase 1636667..1637119 Methylocella silvestris BL2 7092021 YP_002361828.1 CDS Msil_1516 NC_011666.1 1637157 1638512 D PFAM: cytochrome c oxidase subunit I; KEGG: sil:SPOA0216 nitric oxide reductase, large subunit; nitric-oxide reductase 1637157..1638512 Methylocella silvestris BL2 7092022 YP_002361829.1 CDS Msil_1517 NC_011666.1 1638524 1639339 D PFAM: ATPase associated with various cellular activities AAA_5; CbbQ/NirQ/NorQ domain protein; KEGG: noc:Noc_1848 ATPase associated with various cellular activities, AAA_5; ATPase 1638524..1639339 Methylocella silvestris BL2 7092023 YP_002361830.1 CDS Msil_1518 NC_011666.1 1639346 1641298 D PFAM: von Willebrand factor type A; KEGG: sil:SPOA0214 nitric oxide reductase D protein; von Willebrand factor type A 1639346..1641298 Methylocella silvestris BL2 7092024 YP_002361831.1 CDS Msil_1519 NC_011666.1 1641542 1642987 D KEGG: bba:Bd2608 major anaerobically induced transmembrane protein; TIGRFAM: nitrite reductase, copper-containing; PFAM: multicopper oxidase type 1; cytochrome c class I; multicopper oxidase type 2; multicopper oxidase type 3; nitrite reductase 1641542..1642987 Methylocella silvestris BL2 7092025 YP_002361832.1 CDS Msil_1520 NC_011666.1 1642984 1643784 D PFAM: protein of unknown function DUF323; KEGG: bba:Bd2607 hypothetical protein; hypothetical protein 1642984..1643784 Methylocella silvestris BL2 7092026 YP_002361833.1 CDS Msil_1521 NC_011666.1 1643784 1644392 D PFAM: electron transport protein SCO1/SenC; KEGG: bba:Bd2606 signale peptide; electron transport protein SCO1/SenC 1643784..1644392 Methylocella silvestris BL2 7092027 YP_002361834.1 CDS Msil_1522 NC_011666.1 1644428 1644655 D KEGG: bja:bsl7085 hypothetical protein; hypothetical protein 1644428..1644655 Methylocella silvestris BL2 7092028 YP_002361835.1 CDS Msil_1523 NC_011666.1 1644630 1645325 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bja:blr7084 transcriptional regulatory protein; Crp/Fnr family transcriptional regulator complement(1644630..1645325) Methylocella silvestris BL2 7092029 YP_002361836.1 CDS Msil_1524 NC_011666.1 1645535 1646719 D PFAM: NnrS family protein; KEGG: met:M446_5672 NnrS family protein; NnrS family protein 1645535..1646719 Methylocella silvestris BL2 7092030 YP_002361837.1 CDS Msil_1525 NC_011666.1 1646815 1648233 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bja:bll7277 two-component hybrid sensor and regulator; integral membrane sensor signal transduction histidine kinase complement(1646815..1648233) Methylocella silvestris BL2 7092031 YP_002361838.1 CDS Msil_1526 NC_011666.1 1648220 1648393 R KEGG: bja:bll7278 two-component response regulator; response regulator receiver protein complement(1648220..1648393) Methylocella silvestris BL2 7092032 YP_002361839.1 CDS Msil_1527 NC_011666.1 1648448 1648840 D KEGG: mrd:Mrad2831_6122 putative transposase; putative transposase 1648448..1648840 Methylocella silvestris BL2 7092033 YP_002361840.1 CDS Msil_1528 NC_011666.1 1649143 1651020 D TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; KEGG: rpc:RPC_1557 phage tail tape measure protein TP901, core region; phage tail tape measure protein, TP901 family 1649143..1651020 Methylocella silvestris BL2 7092034 YP_002361841.1 CDS Msil_1529 NC_011666.1 1651017 1651175 D hypothetical protein 1651017..1651175 Methylocella silvestris BL2 7092035 YP_002361842.1 CDS Msil_1530 NC_011666.1 1651533 1652681 R hypothetical protein complement(1651533..1652681) Methylocella silvestris BL2 7092036 YP_002361843.1 CDS Msil_1531 NC_011666.1 1652726 1653190 R SMART: helix-turn-helix domain protein; KEGG: xau:Xaut_3428 hypothetical protein; XRE family transcriptional regulator complement(1652726..1653190) Methylocella silvestris BL2 7092037 YP_002361844.1 CDS Msil_1532 NC_011666.1 1653281 1653976 D KEGG: mlo:mll0429 hypothetical protein; hypothetical protein 1653281..1653976 Methylocella silvestris BL2 7092038 YP_002361845.1 CDS Msil_1533 NC_011666.1 1653973 1654422 D hypothetical protein 1653973..1654422 Methylocella silvestris BL2 7092039 YP_002361846.1 CDS Msil_1534 NC_011666.1 1654487 1654750 D hypothetical protein 1654487..1654750 Methylocella silvestris BL2 7092040 YP_002361847.1 CDS Msil_1535 NC_011666.1 1654972 1655193 D PFAM: Prophage CP4-57 regulatory; KEGG: dsh:Dshi_0393 hypothetical protein; phage transcriptional regulator AlpA 1654972..1655193 Methylocella silvestris BL2 7092041 YP_002361848.1 CDS Msil_1536 NC_011666.1 1655190 1655663 D hypothetical protein 1655190..1655663 Methylocella silvestris BL2 7092042 YP_002361849.1 CDS Msil_1537 NC_011666.1 1655660 1655971 D KEGG: met:M446_7053 hypothetical protein; hypothetical protein 1655660..1655971 Methylocella silvestris BL2 7092043 YP_002361850.1 CDS Msil_1538 NC_011666.1 1656006 1656824 D KEGG: met:M446_7054 hypothetical protein; hypothetical protein 1656006..1656824 Methylocella silvestris BL2 7092044 YP_002361851.1 CDS Msil_1539 NC_011666.1 1656894 1658093 D KEGG: nwi:Nwi_1258 hypothetical protein; hypothetical protein 1656894..1658093 Methylocella silvestris BL2 7092045 YP_002361852.1 CDS Msil_1540 NC_011666.1 1658423 1659490 R KEGG: xau:Xaut_2244 nuclease; nuclease complement(1658423..1659490) Methylocella silvestris BL2 7092046 YP_002361853.1 CDS Msil_1541 NC_011666.1 1659487 1660692 R KEGG: xau:Xaut_2243 putative transmembrane protein; hypothetical protein complement(1659487..1660692) Methylocella silvestris BL2 7092047 YP_002361854.1 CDS Msil_1542 NC_011666.1 1660689 1661516 R KEGG: xau:Xaut_2242 hypothetical protein; hypothetical protein complement(1660689..1661516) Methylocella silvestris BL2 7092048 YP_002361855.1 CDS Msil_1543 NC_011666.1 1661491 1662945 R KEGG: rle:pRL110262 putative transmembrane protein; putative transmembrane protein complement(1661491..1662945) Methylocella silvestris BL2 7092049 YP_002361856.1 CDS Msil_1544 NC_011666.1 1663562 1664128 D KEGG: nha:Nham_3339 hypothetical protein; hypothetical protein 1663562..1664128 Methylocella silvestris BL2 7092050 YP_002361857.1 CDS Msil_1545 NC_011666.1 1664306 1665034 D KEGG: bbt:BBta_6602 hypothetical protein; hypothetical protein 1664306..1665034 Methylocella silvestris BL2 7092051 YP_002361858.1 CDS Msil_1546 NC_011666.1 1665071 1666408 D PFAM: peptidase S49; KEGG: rsq:Rsph17025_0104 peptidase S49; peptidase S49 1665071..1666408 Methylocella silvestris BL2 7092052 YP_002361859.1 CDS Msil_1547 NC_011666.1 1666599 1667714 R hypothetical protein complement(1666599..1667714) Methylocella silvestris BL2 7092053 YP_002361860.1 CDS Msil_1548 NC_011666.1 1668981 1669499 D hypothetical protein 1668981..1669499 Methylocella silvestris BL2 7092054 YP_002361861.1 CDS Msil_1549 NC_011666.1 1669921 1670721 D KEGG: rec:RHECIAT_CH0002086 hypothetical protein; hypothetical protein 1669921..1670721 Methylocella silvestris BL2 7092055 YP_002361862.1 CDS Msil_1550 NC_011666.1 1671280 1673301 D PFAM: N-6 DNA methylase; KEGG: lpc:LPC_2790 putative type I restriction enzyme HindVIIP M protein; N-6 DNA methylase 1671280..1673301 Methylocella silvestris BL2 7092056 YP_002361863.1 CDS Msil_1551 NC_011666.1 1673298 1674617 D KEGG: rde:RD1_4054 type I restriction-mod; type I restriction enzyme 1673298..1674617 Methylocella silvestris BL2 7092057 YP_002361864.1 CDS Msil_1552 NC_011666.1 1674614 1675657 D KEGG: ccr:CC_0622 hypothetical protein; hypothetical protein 1674614..1675657 Methylocella silvestris BL2 7092058 YP_002361865.1 CDS Msil_1553 NC_011666.1 1675654 1678611 D PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; KEGG: lpc:LPC_2788 putative type I restriction enzyme R protein; hypothetical protein 1675654..1678611 Methylocella silvestris BL2 7092059 YP_002361866.1 CDS Msil_1554 NC_011666.1 1678608 1679555 D KEGG: pvi:Cvib_0624 hypothetical protein; hypothetical protein 1678608..1679555 Methylocella silvestris BL2 7092060 YP_002361867.1 CDS Msil_1555 NC_011666.1 1679555 1680049 D KEGG: pvi:Cvib_0625 hypothetical protein; hypothetical protein 1679555..1680049 Methylocella silvestris BL2 7092061 YP_002361868.1 CDS Msil_1556 NC_011666.1 1680103 1680480 D KEGG: ade:Adeh_2325 hypothetical protein; hypothetical protein 1680103..1680480 Methylocella silvestris BL2 7092062 YP_002361869.1 CDS Msil_1557 NC_011666.1 1680697 1681908 R PFAM: integrase family protein; KEGG: mlo:mll6432 symbiosis island integrase; integrase family protein complement(1680697..1681908) Methylocella silvestris BL2 7092063 YP_002361870.1 CDS Msil_1558 NC_011666.1 1682257 1683807 R PFAM: HemY domain protein; KEGG: bid:Bind_1190 HemY domain protein; HemY domain-containing protein complement(1682257..1683807) Methylocella silvestris BL2 7092065 YP_002361871.1 CDS Msil_1559 NC_011666.1 1683863 1685140 R KEGG: bid:Bind_1189 hypothetical protein; hypothetical protein complement(1683863..1685140) Methylocella silvestris BL2 7092066 YP_002361872.1 CDS Msil_1560 NC_011666.1 1685789 1688287 D SMART: Parallel beta-helix repeat; KEGG: ypi:YpsIP31758_0673 putative autotransporter protein; hypothetical protein 1685789..1688287 Methylocella silvestris BL2 7092067 YP_002361873.1 CDS Msil_1561 NC_011666.1 1688411 1689181 R KEGG: bid:Bind_2011 ubiquinone biosynthesis O-methyltransferase; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: NodS family protein; Methyltransferase type 11; Methyltransferase type 12; ubiquinone biosynthesis O-methyltransferase complement(1688411..1689181) Methylocella silvestris BL2 7092068 YP_002361874.1 CDS Msil_1562 NC_011666.1 1689352 1690587 D KEGG: bid:Bind_0891 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase 1689352..1690587 Methylocella silvestris BL2 7092069 YP_002361875.1 CDS Msil_1563 NC_011666.1 1690762 1693026 D TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: bid:Bind_0890 PTSINtr with GAF domain, PtsP; protein PtsP 1690762..1693026 Methylocella silvestris BL2 7092070 YP_002361876.1 CDS prfA NC_011666.1 1693135 1694217 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 1693135..1694217 Methylocella silvestris BL2 7092071 YP_002361877.1 CDS Msil_1565 NC_011666.1 1694214 1694654 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: atc:AGR_L_3039 hypothetical protein; hypothetical protein 1694214..1694654 Methylocella silvestris BL2 7092072 YP_002361878.1 CDS Msil_1566 NC_011666.1 1694662 1694979 R hypothetical protein complement(1694662..1694979) Methylocella silvestris BL2 7092073 YP_002361879.1 CDS Msil_1567 NC_011666.1 1695229 1695816 D PFAM: PEBP family protein; KEGG: bid:Bind_0887 PEBP family protein; PEBP family protein 1695229..1695816 Methylocella silvestris BL2 7092074 YP_002361880.1 CDS Msil_1568 NC_011666.1 1695941 1696783 D PFAM: transglutaminase domain protein; KEGG: bid:Bind_3823 transglutaminase domain protein; transglutaminase domain-containing protein 1695941..1696783 Methylocella silvestris BL2 7092075 YP_002361881.1 CDS Msil_1569 NC_011666.1 1696974 1698281 D PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: bid:Bind_0885 protein of unknown function DUF900 hydrolase family protein; hypothetical protein 1696974..1698281 Methylocella silvestris BL2 7092076 YP_002361882.1 CDS Msil_1570 NC_011666.1 1698478 1698765 R KEGG: bid:Bind_1288 protein of unknown function DUF74; hypothetical protein complement(1698478..1698765) Methylocella silvestris BL2 7092077 YP_002361883.1 CDS Msil_1571 NC_011666.1 1699004 1700596 R KEGG: bid:Bind_1287 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(1699004..1700596) Methylocella silvestris BL2 7091421 YP_002361884.1 CDS Msil_1572 NC_011666.1 1700775 1703345 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: bid:Bind_2679 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(1700775..1703345) Methylocella silvestris BL2 7090929 YP_002361885.1 CDS Msil_1573 NC_011666.1 1703628 1703960 D KEGG: bid:Bind_0499 hypothetical protein; hypothetical protein 1703628..1703960 Methylocella silvestris BL2 7090930 YP_002361886.1 CDS Msil_1574 NC_011666.1 1704383 1705195 D PFAM: aspartate/glutamate/uridylate kinase; KEGG: azc:AZC_3023 aspartate/glutamate/uridylate kinase; aspartate/glutamate/uridylate kinase 1704383..1705195 Methylocella silvestris BL2 7090931 YP_002361887.1 CDS Msil_1575 NC_011666.1 1705207 1706040 D PFAM: aspartate/glutamate/uridylate kinase; KEGG: nwi:Nwi_0950 aspartate/glutamate/uridylate kinase; aspartate/glutamate/uridylate kinase 1705207..1706040 Methylocella silvestris BL2 7090932 YP_002361888.1 CDS Msil_1576 NC_011666.1 1706324 1706533 R PFAM: TOBE domain protein; KEGG: rpb:RPB_0855 molybdenum-pterin binding protein; TOBE domain-containing protein complement(1706324..1706533) Methylocella silvestris BL2 7090933 YP_002361889.1 CDS Msil_1578 NC_011666.1 1707080 1707484 R KEGG: bid:Bind_0281 putative transcriptional regulator, ModE family; ModE family transcriptional regulator complement(1707080..1707484) Methylocella silvestris BL2 7090935 YP_002361890.1 CDS Msil_1579 NC_011666.1 1707687 1709615 D PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: bid:Bind_0145 peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase active site domain-containing protein 1707687..1709615 Methylocella silvestris BL2 7090936 YP_002361891.1 CDS Msil_1580 NC_011666.1 1709620 1710135 R KEGG: bid:Bind_0146 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(1709620..1710135) Methylocella silvestris BL2 7090937 YP_002361892.1 CDS Msil_1581 NC_011666.1 1710116 1710988 R KEGG: bid:Bind_0147 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase complement(1710116..1710988) Methylocella silvestris BL2 7090938 YP_002361893.1 CDS Msil_1582 NC_011666.1 1710985 1711200 R KEGG: bra:BRADO5476 hypothetical protein; hypothetical protein complement(1710985..1711200) Methylocella silvestris BL2 7090939 YP_002361894.1 CDS Msil_1583 NC_011666.1 1711331 1711447 D hypothetical protein 1711331..1711447 Methylocella silvestris BL2 7090940 YP_002361895.1 CDS Msil_1584 NC_011666.1 1711447 1712130 D KEGG: bja:blr6192 hypothetical protein; hypothetical protein 1711447..1712130 Methylocella silvestris BL2 7090941 YP_002361896.1 CDS Msil_1585 NC_011666.1 1712174 1713022 R PFAM: extracellular solute-binding protein family 3; KEGG: bja:bll6195 putative methanol oxidation protein; family 3 extracellular solute-binding protein complement(1712174..1713022) Methylocella silvestris BL2 7090942 YP_002361897.1 CDS Msil_1586 NC_011666.1 1713019 1713546 R KEGG: bja:blr6214 putative cytochrome c protein; putative cytochrome c protein complement(1713019..1713546) Methylocella silvestris BL2 7090943 YP_002361898.1 CDS Msil_1587 NC_011666.1 1713639 1715444 R TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: bja:blr6213 methanol dehydrogenase large subunit-like protein; PQQ-dependent dehydrogenase complement(1713639..1715444) Methylocella silvestris BL2 7090944 YP_002361899.1 CDS Msil_1588 NC_011666.1 1716000 1716383 R KEGG: bbt:BBta_5954 hypothetical protein; hypothetical protein complement(1716000..1716383) Methylocella silvestris BL2 7090945 YP_002361900.1 CDS Msil_1589 NC_011666.1 1716377 1716670 R hypothetical protein complement(1716377..1716670) Methylocella silvestris BL2 7090946 YP_002361901.1 CDS Msil_1590 NC_011666.1 1716786 1717382 R PFAM: Glutathione S-transferase domain; KEGG: azc:AZC_3140 putative glutathione S-transferase family protein; glutathione S-transferase domain-containing protein complement(1716786..1717382) Methylocella silvestris BL2 7090947 YP_002361902.1 CDS Msil_1591 NC_011666.1 1717493 1718038 R hypothetical protein complement(1717493..1718038) Methylocella silvestris BL2 7090948 YP_002361903.1 CDS Msil_1592 NC_011666.1 1718145 1719002 R PFAM: protein of unknown function DUF519; KEGG: rpt:Rpal_1365 protein of unknown function DUF519; hypothetical protein complement(1718145..1719002) Methylocella silvestris BL2 7090949 YP_002361904.1 CDS Msil_1593 NC_011666.1 1719006 1719911 R PFAM: ribonuclease T2; KEGG: mrd:Mrad2831_2266 ribonuclease T2; ribonuclease T2 complement(1719006..1719911) Methylocella silvestris BL2 7090950 YP_002361905.1 CDS Msil_1594 NC_011666.1 1719916 1720374 R KEGG: bid:Bind_0659 putative exported protein of unknown function; hypothetical protein complement(1719916..1720374) Methylocella silvestris BL2 7090951 YP_002361906.1 CDS Msil_1595 NC_011666.1 1720532 1721944 R KEGG: bid:Bind_2642 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase complement(1720532..1721944) Methylocella silvestris BL2 7090952 YP_002361907.1 CDS Msil_1596 NC_011666.1 1722233 1722859 D PFAM: ribonuclease HII/HIII; KEGG: bid:Bind_0921 ribonuclease H; Ribonuclease H 1722233..1722859 Methylocella silvestris BL2 7090953 YP_002361908.1 CDS Msil_1597 NC_011666.1 1723021 1724160 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bid:Bind_0750 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 1723021..1724160 Methylocella silvestris BL2 7090954 YP_002361909.1 CDS Msil_1598 NC_011666.1 1724176 1724520 R KEGG: mmi:MMAR_5324 hypothetical protein; hypothetical protein complement(1724176..1724520) Methylocella silvestris BL2 7090955 YP_002361910.1 CDS Msil_1599 NC_011666.1 1724594 1724869 R KEGG: bid:Bind_0749 hypothetical protein; hypothetical protein complement(1724594..1724869) Methylocella silvestris BL2 7090956 YP_002361911.1 CDS Msil_1600 NC_011666.1 1724866 1725945 R KEGG: bid:Bind_0748 A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; A/G-specific adenine glycosylase MutY; SMART: iron-sulfur cluster loop; A/G-specific adenine glycosylase complement(1724866..1725945) Methylocella silvestris BL2 7090957 YP_002361912.1 CDS Msil_1601 NC_011666.1 1726117 1726608 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cbd:CBUD_0821 glyoxalase family protein; Glyoxalase/bleomycin resistance protein/dioxygenase 1726117..1726608 Methylocella silvestris BL2 7090958 YP_002361913.1 CDS Msil_1602 NC_011666.1 1726654 1727160 D PFAM: protein of unknown function DUF721; KEGG: bid:Bind_0747 protein of unknown function DUF1159; hypothetical protein 1726654..1727160 Methylocella silvestris BL2 7090959 YP_002361914.1 CDS Msil_1603 NC_011666.1 1727297 1727986 D PFAM: DSBA oxidoreductase; KEGG: bid:Bind_0746 DsbA oxidoreductase; DSBA oxidoreductase 1727297..1727986 Methylocella silvestris BL2 7090960 YP_002361915.1 CDS Msil_1604 NC_011666.1 1728900 1729292 R PFAM: protein of unknown function DUF59; KEGG: bid:Bind_0102 protein of unknown function DUF59; hypothetical protein complement(1728900..1729292) Methylocella silvestris BL2 7090961 YP_002361916.1 CDS Msil_1606 NC_011666.1 1730725 1732071 R TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: bid:Bind_0100 FeS assembly protein SufD; FeS assembly protein SufD complement(1730725..1732071) Methylocella silvestris BL2 7090963 YP_002361917.1 CDS Msil_1607 NC_011666.1 1732084 1732833 R KEGG: bid:Bind_0099 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC complement(1732084..1732833) Methylocella silvestris BL2 7090964 YP_002361918.1 CDS Msil_1608 NC_011666.1 1732947 1734419 R TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: bid:Bind_0098 FeS assembly protein SufB; FeS assembly protein SufB complement(1732947..1734419) Methylocella silvestris BL2 7090965 YP_002361919.1 CDS Msil_1609 NC_011666.1 1734520 1735698 R PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bid:Bind_0097 aminotransferase class V; class V aminotransferase complement(1734520..1735698) Methylocella silvestris BL2 7090966 YP_002361920.1 CDS Msil_1610 NC_011666.1 1736123 1736812 D KEGG: bid:Bind_0096 conserved hypothetical protein; putative alpha/beta hydrolase domain; putative alpha/beta hydrolase domain-containing protein 1736123..1736812 Methylocella silvestris BL2 7090967 YP_002361921.1 CDS Msil_1611 NC_011666.1 1736838 1737407 R KEGG: bbt:BBta_0886 hypothetical protein; hypothetical protein complement(1736838..1737407) Methylocella silvestris BL2 7090968 YP_002361922.1 CDS anmK NC_011666.1 1737505 1738617 R catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase complement(1737505..1738617) Methylocella silvestris BL2 7090969 YP_002361923.1 CDS Msil_1613 NC_011666.1 1738769 1739368 D KEGG: bja:blr3581 hypothetical protein; hypothetical protein 1738769..1739368 Methylocella silvestris BL2 7090970 YP_002361924.1 CDS Msil_1614 NC_011666.1 1739480 1741405 D KEGG: xau:Xaut_4305 hypothetical protein; hypothetical protein 1739480..1741405 Methylocella silvestris BL2 7090971 YP_002361925.1 CDS Msil_1615 NC_011666.1 1741402 1743024 D PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: xau:Xaut_4304 pyruvate phosphate dikinase PEP/pyruvate-binding; Pyruvate, phosphate dikinase 1741402..1743024 Methylocella silvestris BL2 7090972 YP_002361926.1 CDS Msil_1616 NC_011666.1 1743092 1744351 D KEGG: bid:Bind_0020 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; tyrosyl-tRNA synthetase 1743092..1744351 Methylocella silvestris BL2 7090973 YP_002361927.1 CDS Msil_1617 NC_011666.1 1744621 1745748 D KEGG: aor:AO090011000131 hypothetical protein; hypothetical protein 1744621..1745748 Methylocella silvestris BL2 7090974 YP_002361928.1 CDS Msil_1618 NC_011666.1 1745881 1749474 R KEGG: bid:Bind_0013 hypothetical protein; hypothetical protein complement(1745881..1749474) Methylocella silvestris BL2 7090975 YP_002361929.1 CDS Msil_1619 NC_011666.1 1749748 1750233 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bid:Bind_0012 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 1749748..1750233 Methylocella silvestris BL2 7090976 YP_002361930.1 CDS Msil_1620 NC_011666.1 1750263 1750850 R PFAM: conserved hypothetical protein; KEGG: bid:Bind_1021 hypothetical protein; hypothetical protein complement(1750263..1750850) Methylocella silvestris BL2 7090977 YP_002361931.1 CDS Msil_1621 NC_011666.1 1751000 1751851 R TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: bid:Bind_1020 3'(2'),5'-bisphosphate nucleotidase; 3'(2'),5'-bisphosphate nucleotidase complement(1751000..1751851) Methylocella silvestris BL2 7090978 YP_002361932.1 CDS Msil_1622 NC_011666.1 1752149 1753345 R TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: rpb:RPB_4142 carbamoyl phosphate synthase small subunit; carbamoyl-phosphate synthase small subunit complement(1752149..1753345) Methylocella silvestris BL2 7090979 YP_002361933.1 CDS Msil_1623 NC_011666.1 1753584 1754042 D KEGG: bid:Bind_3296 GatB/YqeY; GatB/YqeY 1753584..1754042 Methylocella silvestris BL2 7090980 YP_002361934.1 CDS Msil_1624 NC_011666.1 1754029 1755222 R PFAM: beta-lactamase; KEGG: azc:AZC_0991 beta-lactamase; beta-lactamase complement(1754029..1755222) Methylocella silvestris BL2 7090981 YP_002361935.1 CDS Msil_1625 NC_011666.1 1755357 1756175 R KEGG: bid:Bind_3297 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(1755357..1756175) Methylocella silvestris BL2 7090982 YP_002361936.1 CDS Msil_1626 NC_011666.1 1756384 1758327 D KEGG: bid:Bind_3298 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein; DNA primase 1756384..1758327 Methylocella silvestris BL2 7090983 YP_002361937.1 CDS Msil_1627 NC_011666.1 1758760 1760811 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 1758760..1760811 Methylocella silvestris BL2 7090984 YP_002361938.1 CDS Msil_1628 NC_011666.1 1760871 1761104 R hypothetical protein complement(1760871..1761104) Methylocella silvestris BL2 7090985 YP_002361939.1 CDS Msil_1629 NC_011666.1 1761349 1762005 R KEGG: mex:Mext_2003 cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; cob(II)yrinic acid a,c-diamide reductase complement(1761349..1762005) Methylocella silvestris BL2 7090986 YP_002361940.1 CDS Msil_1630 NC_011666.1 1762024 1763121 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(1762024..1763121) Methylocella silvestris BL2 7090987 YP_002361941.1 CDS Msil_1631 NC_011666.1 1763137 1763583 R KEGG: azc:AZC_4149 PilT domain-containing protein; PilT domain-containing protein complement(1763137..1763583) Methylocella silvestris BL2 7090988 YP_002361942.1 CDS Msil_1632 NC_011666.1 1763836 1764426 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(1763836..1764426) Methylocella silvestris BL2 7090989 YP_002361943.1 CDS Msil_1633 NC_011666.1 1764548 1765231 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc complement(1764548..1765231) Methylocella silvestris BL2 7090990 YP_002361944.1 CDS Msil_1634 NC_011666.1 1765393 1767198 D PFAM: CBS domain containing protein; Chloride channel core; KEGG: bid:Bind_0191 chloride channel core; chloride channel protein 1765393..1767198 Methylocella silvestris BL2 7090991 YP_002361945.1 CDS Msil_1635 NC_011666.1 1767669 1768568 D KEGG: bid:Bind_3876 hypothetical protein; hypothetical protein 1767669..1768568 Methylocella silvestris BL2 7090992 YP_002361946.1 CDS Msil_1636 NC_011666.1 1768598 1769572 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: cak:Caul_0650 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(1768598..1769572) Methylocella silvestris BL2 7090993 YP_002361947.1 CDS Msil_1637 NC_011666.1 1769672 1770568 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cak:Caul_0649 transcriptional regulator, LysR family; LysR family transcriptional regulator 1769672..1770568 Methylocella silvestris BL2 7090994 YP_002361948.1 CDS ruvB NC_011666.1 1770649 1771695 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1770649..1771695 Methylocella silvestris BL2 7090995 YP_002361949.1 CDS Msil_1639 NC_011666.1 1771699 1774092 R PFAM: Transketolase central region; KEGG: mlo:mlr9539 pyruvate dehydrogenase E1 component-like protein; transketolase complement(1771699..1774092) Methylocella silvestris BL2 7090996 YP_002361950.1 CDS Msil_1640 NC_011666.1 1774221 1774685 D PFAM: regulatory protein AsnC/Lrp family; KEGG: mlo:mll9538 transcriptional regulator-like protein; AsnC family transcriptional regulator 1774221..1774685 Methylocella silvestris BL2 7090997 YP_002361951.1 CDS Msil_1641 NC_011666.1 1774764 1776332 R PFAM: glucose-methanol-choline oxidoreductase; KEGG: bid:Bind_3202 gluconate 2-dehydrogenase (acceptor); glucose-methanol-choline oxidoreductase complement(1774764..1776332) Methylocella silvestris BL2 7090998 YP_002361952.1 CDS Msil_1642 NC_011666.1 1776357 1776905 R KEGG: bid:Bind_3203 hypothetical protein; hypothetical protein complement(1776357..1776905) Methylocella silvestris BL2 7090999 YP_002361953.1 CDS Msil_1643 NC_011666.1 1776978 1777373 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bid:Bind_3204 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(1776978..1777373) Methylocella silvestris BL2 7091000 YP_002361954.1 CDS Msil_1644 NC_011666.1 1777384 1777785 R PFAM: cytochrome c class I; KEGG: bid:Bind_3205 cytochrome c class I; cytochrome c class I complement(1777384..1777785) Methylocella silvestris BL2 7091001 YP_002361955.1 CDS Msil_1645 NC_011666.1 1777970 1778323 R KEGG: bid:Bind_3391 hypothetical protein; siderophore biosynthesis protein-like protein complement(1777970..1778323) Methylocella silvestris BL2 7091002 YP_002361956.1 CDS Msil_1646 NC_011666.1 1778382 1780451 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bid:Bind_3392 GAF modulated sigma54 specific transcriptional regulator, fis family; Fis family GAF modulated sigma54 specific transcriptional regulator complement(1778382..1780451) Methylocella silvestris BL2 7091003 YP_002361957.1 CDS groEL NC_011666.1 1780624 1782267 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL complement(1780624..1782267) Methylocella silvestris BL2 7091004 YP_002361958.1 CDS Msil_1648 NC_011666.1 1782417 1782773 R PFAM: monooxygenase component MmoB/DmpM; KEGG: bid:Bind_3394 phenol 2-monooxygenase; monooxygenase component MmoB/DmpM complement(1782417..1782773) Methylocella silvestris BL2 7091005 YP_002361959.1 CDS Msil_1649 NC_011666.1 1782848 1783921 R PFAM: methane/phenol/toluene hydroxylase; KEGG: bid:Bind_3395 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase complement(1782848..1783921) Methylocella silvestris BL2 7091006 YP_002361960.1 CDS Msil_1650 NC_011666.1 1783949 1785004 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bid:Bind_3396 oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(1783949..1785004) Methylocella silvestris BL2 7091007 YP_002361961.1 CDS Msil_1651 NC_011666.1 1785113 1786771 R PFAM: methane/phenol/toluene hydroxylase; KEGG: bid:Bind_3397 methane monooxygenase; methane monooxygenase complement(1785113..1786771) Methylocella silvestris BL2 7091008 YP_002361962.1 CDS Msil_1652 NC_011666.1 1787167 1788684 R KEGG: bid:Bind_3661 hypothetical protein; hypothetical protein complement(1787167..1788684) Methylocella silvestris BL2 7091009 YP_002361963.1 CDS Msil_1653 NC_011666.1 1788962 1789792 R PFAM: phospholipid/glycerol acyltransferase; KEGG: bid:Bind_3630 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(1788962..1789792) Methylocella silvestris BL2 7093112 YP_002361964.1 CDS Msil_1654 NC_011666.1 1789982 1790896 D KEGG: bid:Bind_3632 hypothetical protein; hypothetical protein 1789982..1790896 Methylocella silvestris BL2 7093114 YP_002361965.1 CDS Msil_1655 NC_011666.1 1791054 1791833 D PFAM: protein of unknown function DUF1217; KEGG: bid:Bind_2809 protein of unknown function DUF1217; hypothetical protein 1791054..1791833 Methylocella silvestris BL2 7093115 YP_002361966.1 CDS Msil_1656 NC_011666.1 1791837 1792562 D PFAM: flagellar basal body rod protein; KEGG: bid:Bind_2810 flagellar basal body rod protein; flagellar basal body rod protein 1791837..1792562 Methylocella silvestris BL2 7093116 YP_002361967.1 CDS fliI NC_011666.1 1792559 1793908 D involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 1792559..1793908 Methylocella silvestris BL2 7093117 YP_002361968.1 CDS Msil_1658 NC_011666.1 1793978 1794304 R PFAM: protein of unknown function UPF0060; KEGG: mlo:mll7841 hypothetical protein; hypothetical protein complement(1793978..1794304) Methylocella silvestris BL2 7093118 YP_002361969.1 CDS Msil_1659 NC_011666.1 1794520 1797648 R proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(1794520..1797648) Methylocella silvestris BL2 7093119 YP_002361970.1 CDS Msil_1660 NC_011666.1 1797726 1798958 R TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: bid:Bind_2814 ornithine aminotransferase; ornithine aminotransferase complement(1797726..1798958) Methylocella silvestris BL2 7093120 YP_002361971.1 CDS Msil_1661 NC_011666.1 1799120 1799644 R PFAM: protein of unknown function UPF0153; KEGG: rpb:RPB_3505 hypothetical protein; hypothetical protein complement(1799120..1799644) Methylocella silvestris BL2 7093121 YP_002361972.1 CDS Msil_1662 NC_011666.1 1799966 1802194 D KEGG: bid:Bind_1627 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 1799966..1802194 Methylocella silvestris BL2 7093122 YP_002361973.1 CDS Msil_1663 NC_011666.1 1802316 1802894 D PFAM: protein of unknown function DUF1214; KEGG: rpd:RPD_1952 hypothetical protein; hypothetical protein 1802316..1802894 Methylocella silvestris BL2 7093123 YP_002361974.1 CDS Msil_1664 NC_011666.1 1802891 1803472 D KEGG: bid:Bind_1633 hypothetical protein; hypothetical protein 1802891..1803472 Methylocella silvestris BL2 7093124 YP_002361975.1 CDS Msil_1665 NC_011666.1 1803649 1803858 R hypothetical protein complement(1803649..1803858) Methylocella silvestris BL2 7093125 YP_002361976.1 CDS Msil_1666 NC_011666.1 1804209 1804589 R KEGG: met:M446_4209 hypothetical protein; hypothetical protein complement(1804209..1804589) Methylocella silvestris BL2 7093126 YP_002361977.1 CDS Msil_1667 NC_011666.1 1804617 1804832 D hypothetical protein 1804617..1804832 Methylocella silvestris BL2 7093127 YP_002361978.1 CDS Msil_1668 NC_011666.1 1804832 1806454 D PFAM: phosphate transporter; KEGG: bid:Bind_1637 phosphate transporter; phosphate transporter 1804832..1806454 Methylocella silvestris BL2 7093128 YP_002361979.1 CDS Msil_1669 NC_011666.1 1806534 1807220 R PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bid:Bind_1638 peptidoglycan-binding domain 1 protein; peptidoglycan-binding domain 1 protein complement(1806534..1807220) Methylocella silvestris BL2 7093129 YP_002361980.1 CDS Msil_1670 NC_011666.1 1807213 1808697 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bid:Bind_1639 multi-sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase complement(1807213..1808697) Methylocella silvestris BL2 7093130 YP_002361981.1 CDS Msil_1671 NC_011666.1 1809033 1809341 D KEGG: azc:AZC_1092 hypothetical protein; hypothetical protein 1809033..1809341 Methylocella silvestris BL2 7093131 YP_002361982.1 CDS Msil_1672 NC_011666.1 1809453 1809881 D PFAM: Fe-S metabolism associated SufE; KEGG: bid:Bind_1641 Fe-S metabolism associated SufE; Fe-S metabolism associated SufE 1809453..1809881 Methylocella silvestris BL2 7093132 YP_002361983.1 CDS Msil_1673 NC_011666.1 1810001 1810414 R PFAM: ROSMUCR transcriptional regulator; KEGG: bid:Bind_1642 transcriptional regulator, MucR family; MucR family transcriptional regulator complement(1810001..1810414) Methylocella silvestris BL2 7093133 YP_002361984.1 CDS Msil_1674 NC_011666.1 1810930 1813062 D PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: bid:Bind_1644 oligopeptidase B; oligopeptidase B 1810930..1813062 Methylocella silvestris BL2 7093134 YP_002361985.1 CDS Msil_1675 NC_011666.1 1813088 1814089 R KEGG: bid:Bind_1645 hypothetical protein; hypothetical protein complement(1813088..1814089) Methylocella silvestris BL2 7093135 YP_002361986.1 CDS Msil_1676 NC_011666.1 1814392 1814991 D PFAM: manganese and iron superoxide dismutase; KEGG: bid:Bind_1646 superoxide dismutase; Superoxide dismutase 1814392..1814991 Methylocella silvestris BL2 7093136 YP_002361987.1 CDS Msil_1677 NC_011666.1 1815064 1815693 R KEGG: bid:Bind_1221 cold-shock protein DNA-binding; DNA-binding cold-shock protein complement(1815064..1815693) Methylocella silvestris BL2 7093137 YP_002361988.1 CDS Msil_1678 NC_011666.1 1816067 1816777 D Represses a number of genes involved in the response to DNA damage; LexA repressor 1816067..1816777 Methylocella silvestris BL2 7093138 YP_002361989.1 CDS Msil_1679 NC_011666.1 1816818 1819157 R PFAM: ComEC/Rec2-related protein; KEGG: bid:Bind_1411 ComEC/Rec2-related protein; ComEC/Rec2-like protein complement(1816818..1819157) Methylocella silvestris BL2 7093139 YP_002361990.1 CDS gltX NC_011666.1 1819398 1820819 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1819398..1820819 Methylocella silvestris BL2 7093140 YP_002361991.1 CDS Msil_1681 NC_011666.1 1821228 1822517 D KEGG: bid:Bind_1409 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I 1821228..1822517 Methylocella silvestris BL2 7093141 YP_002361992.1 CDS Msil_1683 NC_011666.1 1823833 1824609 D TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bid:Bind_1402 exodeoxyribonuclease III; exodeoxyribonuclease III 1823833..1824609 Methylocella silvestris BL2 7093143 YP_002361993.1 CDS Msil_1684 NC_011666.1 1824625 1825473 R PFAM: protein of unknown function DUF72; KEGG: cti:RALTA_A0022 conserved hypothetical protein, DUF72; putative exported protein; hypothetical protein complement(1824625..1825473) Methylocella silvestris BL2 7093144 YP_002361994.1 CDS Msil_1685 NC_011666.1 1825595 1826437 R PFAM: Sel1 domain protein repeat-containing protein; KEGG: bid:Bind_1863 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein complement(1825595..1826437) Methylocella silvestris BL2 7093145 YP_002361995.1 CDS Msil_1686 NC_011666.1 1827075 1827554 R Transcriptional regulator that represses the manganese transporter MntH when manganese is present; manganese transport regulator MntR complement(1827075..1827554) Methylocella silvestris BL2 7093146 YP_002361996.1 CDS Msil_1687 NC_011666.1 1827781 1829127 D TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: rpe:RPE_3015 manganese transport protein MntH; NRAMP family Mn2+/Fe2+ transporter 1827781..1829127 Methylocella silvestris BL2 7093147 YP_002361997.1 CDS Msil_1688 NC_011666.1 1829131 1831839 R TIGRFAM: valyl-tRNA synthetase; KEGG: bid:Bind_1723 valyl-tRNA synthetase; valyl-tRNA synthetase complement(1829131..1831839) Methylocella silvestris BL2 7093148 YP_002361998.1 CDS Msil_1689 NC_011666.1 1832021 1832485 R KEGG: bid:Bind_1724 hypothetical protein; hypothetical protein complement(1832021..1832485) Methylocella silvestris BL2 7093149 YP_002361999.1 CDS Msil_1690 NC_011666.1 1832775 1834211 R TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: bid:Bind_1725 type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein complement(1832775..1834211) Methylocella silvestris BL2 7093150 YP_002362000.1 CDS Msil_1691 NC_011666.1 1834338 1835030 R PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: bid:Bind_1726 protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(1834338..1835030) Methylocella silvestris BL2 7093151 YP_002362001.1 CDS Msil_1692 NC_011666.1 1835313 1835858 R KEGG: bid:Bind_1625 conserved hypothetical protein; putative signal peptide; hypothetical protein complement(1835313..1835858) Methylocella silvestris BL2 7093152 YP_002362002.1 CDS tsf NC_011666.1 1836043 1836975 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(1836043..1836975) Methylocella silvestris BL2 7093153 YP_002362003.1 CDS rpsB NC_011666.1 1837076 1838125 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(1837076..1838125) Methylocella silvestris BL2 7093154 YP_002362004.1 CDS Msil_1695 NC_011666.1 1838417 1839904 D PFAM: FAD linked oxidase domain protein; KEGG: oan:Oant_3010 D-lactate dehydrogenase (cytochrome); FAD linked oxidase domain-containing protein 1838417..1839904 Methylocella silvestris BL2 7093155 YP_002362005.1 CDS Msil_1696 NC_011666.1 1839961 1841262 R PFAM: Di-haem cytochrome c peroxidase; KEGG: bid:Bind_1613 di-haem cytochrome c peroxidase; Di-heme cytochrome c peroxidase complement(1839961..1841262) Methylocella silvestris BL2 7093156 YP_002362006.1 CDS Msil_1697 NC_011666.1 1841424 1842986 D TIGRFAM: acid phosphatase; PFAM: phosphoesterase; KEGG: bid:Bind_1612 acid phosphatase; acid phosphatase 1841424..1842986 Methylocella silvestris BL2 7093157 YP_002362007.1 CDS Msil_1698 NC_011666.1 1843246 1846704 R KEGG: bid:Bind_1596 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha complement(1843246..1846704) Methylocella silvestris BL2 7093158 YP_002362008.1 CDS Msil_1699 NC_011666.1 1846820 1847713 R KEGG: bph:Bphy_1682 transcription factor jumonji JmjC domain protein; transcription factor jumonji JmjC domain-containing protein complement(1846820..1847713) Methylocella silvestris BL2 7093159 YP_002362009.1 CDS Msil_1700 NC_011666.1 1848027 1848920 D KEGG: bph:Bphy_1682 transcription factor jumonji JmjC domain protein; transcription factor jumonji JmjC domain-containing protein 1848027..1848920 Methylocella silvestris BL2 7093160 YP_002362010.1 CDS Msil_1701 NC_011666.1 1849030 1849371 R KEGG: bid:Bind_1598 hypothetical protein; hypothetical protein complement(1849030..1849371) Methylocella silvestris BL2 7093161 YP_002362011.1 CDS Msil_1702 NC_011666.1 1849484 1850245 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_1588 general L-amino acid ABC transporter ATP-binding protein; ABC transporter-like protein complement(1849484..1850245) Methylocella silvestris BL2 7093162 YP_002362012.1 CDS Msil_1703 NC_011666.1 1850264 1851418 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bid:Bind_1600 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(1850264..1851418) Methylocella silvestris BL2 7093163 YP_002362013.1 CDS Msil_1704 NC_011666.1 1851420 1852595 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bid:Bind_1601 binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(1851420..1852595) Methylocella silvestris BL2 7093164 YP_002362014.1 CDS Msil_1705 NC_011666.1 1852643 1853665 R TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bid:Bind_1602 cationic amino acid ABC transporter, periplasmic binding protein; cationic amino acid ABC transporter substrate-binding protein complement(1852643..1853665) Methylocella silvestris BL2 7093165 YP_002362015.1 CDS Msil_1706 NC_011666.1 1854067 1855458 R PFAM: Aldehyde Dehydrogenase; KEGG: azc:AZC_0321 putative succinate-semialdehyde dehydrogenase; aldehyde dehydrogenase complement(1854067..1855458) Methylocella silvestris BL2 7093166 YP_002362016.1 CDS Msil_1707 NC_011666.1 1855793 1856980 D TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: bid:Bind_1604 cystathionine beta-lyase; cystathionine beta-lyase 1855793..1856980 Methylocella silvestris BL2 7093167 YP_002362017.1 CDS Msil_1708 NC_011666.1 1857072 1857875 D KEGG: bid:Bind_1605 hypothetical protein; hypothetical protein 1857072..1857875 Methylocella silvestris BL2 7093168 YP_002362018.1 CDS Msil_1709 NC_011666.1 1858101 1858424 D hypothetical protein 1858101..1858424 Methylocella silvestris BL2 7093169 YP_002362019.1 CDS Msil_1710 NC_011666.1 1858786 1859016 D hypothetical protein 1858786..1859016 Methylocella silvestris BL2 7093170 YP_002362020.1 CDS Msil_1711 NC_011666.1 1859025 1860116 R KEGG: rpe:RPE_4190 hypothetical protein; hypothetical protein complement(1859025..1860116) Methylocella silvestris BL2 7093171 YP_002362021.1 CDS Msil_1712 NC_011666.1 1860272 1861948 R catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase complement(1860272..1861948) Methylocella silvestris BL2 7093172 YP_002362022.1 CDS Msil_1713 NC_011666.1 1861973 1862914 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: met:M446_6553 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase complement(1861973..1862914) Methylocella silvestris BL2 7093173 YP_002362023.1 CDS Msil_1714 NC_011666.1 1863161 1864351 R PFAM: aminotransferase class V; KEGG: met:M446_6552 serine--glyoxylate transaminase; class V aminotransferase complement(1863161..1864351) Methylocella silvestris BL2 7093174 YP_002362024.1 CDS Msil_1715 NC_011666.1 1864517 1865782 R PFAM: MOFRL domain protein; KEGG: mpt:Mpe_A3263 glycerate 2-kinase; hydroxypyruvate reductase complement(1864517..1865782) Methylocella silvestris BL2 7093175 YP_002362025.1 CDS Msil_1716 NC_011666.1 1866166 1867365 D catalyzes the formation of malyl-CoA from malate and CoA; malate--CoA ligase subunit beta 1866166..1867365 Methylocella silvestris BL2 7093176 YP_002362026.1 CDS Msil_1717 NC_011666.1 1867442 1868368 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1867442..1868368 Methylocella silvestris BL2 7093177 YP_002362027.1 CDS Msil_1718 NC_011666.1 1868659 1871418 D PFAM: phosphoenolpyruvate carboxylase; KEGG: met:M446_6558 phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 1868659..1871418 Methylocella silvestris BL2 7093178 YP_002362028.1 CDS Msil_1719 NC_011666.1 1871491 1872468 D PFAM: HpcH/HpaI aldolase; KEGG: mpt:Mpe_A3254 citryl-CoA lyase; Citrate (pro-3S)-lyase 1871491..1872468 Methylocella silvestris BL2 7093179 YP_002362029.1 CDS Msil_1720 NC_011666.1 1872523 1872828 D PFAM: CutA1 divalent ion tolerance protein; KEGG: mba:Mbar_A3115 divalent cation tolerance protein; CutA1 divalent ion tolerance protein 1872523..1872828 Methylocella silvestris BL2 7093180 YP_002362030.1 CDS Msil_1721 NC_011666.1 1873155 1873859 R KEGG: rru:Rru_A3227 methyltransferase; methyltransferase complement(1873155..1873859) Methylocella silvestris BL2 7093181 YP_002362031.1 CDS Msil_1722 NC_011666.1 1873888 1874271 R in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane; fumarate reductase subunit D complement(1873888..1874271) Methylocella silvestris BL2 7093182 YP_002362032.1 CDS Msil_1723 NC_011666.1 1874268 1874672 R KEGG: cvi:CV_3367 fumarate reductase, subunit C; fumarate reductase subunit C complement(1874268..1874672) Methylocella silvestris BL2 7093183 YP_002362033.1 CDS Msil_1724 NC_011666.1 1874669 1875445 R KEGG: cvi:CV_3368 fumarate reductase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; succinate dehydrogenase and fumarate reductase iron-sulfur protein complement(1874669..1875445) Methylocella silvestris BL2 7093184 YP_002362034.1 CDS Msil_1725 NC_011666.1 1875438 1877222 R part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit complement(1875438..1877222) Methylocella silvestris BL2 7093185 YP_002362035.1 CDS Msil_1726 NC_011666.1 1877236 1878756 R TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; KEGG: kpn:KPN_01547 putative tartrate:succinate antiporter (DASS family); anion transporter complement(1877236..1878756) Methylocella silvestris BL2 7093186 YP_002362036.1 CDS Msil_1728 NC_011666.1 1880276 1880701 R KEGG: bid:Bind_0798 hypothetical protein; hypothetical protein complement(1880276..1880701) Methylocella silvestris BL2 7093188 YP_002362037.1 CDS Msil_1729 NC_011666.1 1880829 1881317 D PFAM: oxidoreductase molybdopterin binding; KEGG: cak:Caul_2730 hypothetical protein; molybdopterin-binding oxidoreductase 1880829..1881317 Methylocella silvestris BL2 7093189 YP_002362038.1 CDS Msil_1730 NC_011666.1 1881340 1881510 R KEGG: swi:Swit_4564 hypothetical protein; hypothetical protein complement(1881340..1881510) Methylocella silvestris BL2 7093190 YP_002362039.1 CDS Msil_1731 NC_011666.1 1881706 1882221 D hypothetical protein 1881706..1882221 Methylocella silvestris BL2 7093191 YP_002362040.1 CDS Msil_1732 NC_011666.1 1882222 1883322 R KEGG: nha:Nham_3998 putative DNA topoisomerase I; DNA topoisomerase complement(1882222..1883322) Methylocella silvestris BL2 7093192 YP_002362041.1 CDS Msil_1733 NC_011666.1 1883457 1884758 D PFAM: protein of unknown function DUF763; KEGG: rle:pRL120740 hypothetical protein; hypothetical protein 1883457..1884758 Methylocella silvestris BL2 7093193 YP_002362042.1 CDS Msil_1734 NC_011666.1 1884771 1885619 D TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: atc:AGR_pAT_65 hypothetical protein; Ku protein 1884771..1885619 Methylocella silvestris BL2 7093194 YP_002362043.1 CDS Msil_1735 NC_011666.1 1885634 1886449 R TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: bid:Bind_0383 Ku protein; Ku protein complement(1885634..1886449) Methylocella silvestris BL2 7094010 YP_002362044.1 CDS ligD NC_011666.1 1886469 1889135 R catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase complement(1886469..1889135) Methylocella silvestris BL2 7090848 YP_002362045.1 CDS Msil_1737 NC_011666.1 1889202 1890767 R PFAM: amine oxidase; KEGG: bid:Bind_3575 amine oxidase; amine oxidase complement(1889202..1890767) Methylocella silvestris BL2 7090849 YP_002362046.1 CDS Msil_1738 NC_011666.1 1890792 1891136 R KEGG: bid:Bind_3574 ferredoxin, 2Fe-2S (AaFd4); ferredoxin, 2Fe-2S (AaFd4) complement(1890792..1891136) Methylocella silvestris BL2 7090850 YP_002362047.1 CDS Msil_1739 NC_011666.1 1891400 1892158 R Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC complement(1891400..1892158) Methylocella silvestris BL2 7090851 YP_002362048.1 CDS Msil_1740 NC_011666.1 1892329 1892943 D PFAM: Glutathione S-transferase domain; KEGG: mca:MCA1303 glutathione S-transferase; glutathione S-transferase domain-containing protein 1892329..1892943 Methylocella silvestris BL2 7090852 YP_002362049.1 CDS Msil_1741 NC_011666.1 1892962 1894746 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bid:Bind_1754 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein complement(1892962..1894746) Methylocella silvestris BL2 7090853 YP_002362050.1 CDS Msil_1742 NC_011666.1 1894776 1897097 R PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bid:Bind_1755 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase complement(1894776..1897097) Methylocella silvestris BL2 7090854 YP_002362051.1 CDS Msil_1743 NC_011666.1 1897097 1898233 R KEGG: bid:Bind_1756 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(1897097..1898233) Methylocella silvestris BL2 7090855 YP_002362052.1 CDS Msil_1744 NC_011666.1 1898392 1898796 R PFAM: Secreted repeat of unknown function; KEGG: mrd:Mrad2831_5259 secreted repeat of unknown function; hypothetical protein complement(1898392..1898796) Methylocella silvestris BL2 7090856 YP_002362053.1 CDS Msil_1745 NC_011666.1 1899939 1900412 R KEGG: bid:Bind_2722 hypothetical protein; hypothetical protein complement(1899939..1900412) Methylocella silvestris BL2 7090857 YP_002362054.1 CDS Msil_1746 NC_011666.1 1900735 1902900 R KEGG: ote:Oter_0553 hypothetical protein; hypothetical protein complement(1900735..1902900) Methylocella silvestris BL2 7090858 YP_002362055.1 CDS Msil_1747 NC_011666.1 1903311 1903691 D PFAM: YCII-related; KEGG: xau:Xaut_4188 DGPFAETKE family protein; YciI-like protein 1903311..1903691 Methylocella silvestris BL2 7090859 YP_002362056.1 CDS Msil_1748 NC_011666.1 1903702 1904952 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: xau:Xaut_4187 RNA polymerase ECF-subfamily sigma factor; putative ECF subfamily RNA polymerase sigma-24 subunit 1903702..1904952 Methylocella silvestris BL2 7090860 YP_002362057.1 CDS Msil_1749 NC_011666.1 1905060 1905509 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: pzu:PHZ_c3155 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase 1905060..1905509 Methylocella silvestris BL2 7090861 YP_002362058.1 CDS Msil_1750 NC_011666.1 1905545 1906399 R KEGG: mbb:BCG_3501c putative transmembrane protein; hypothetical protein complement(1905545..1906399) Methylocella silvestris BL2 7090862 YP_002362059.1 CDS Msil_1751 NC_011666.1 1906936 1907172 D hypothetical protein 1906936..1907172 Methylocella silvestris BL2 7090863 YP_002362060.1 CDS Msil_1752 NC_011666.1 1907347 1907805 R KEGG: bid:Bind_2794 hypothetical protein; hypothetical protein complement(1907347..1907805) Methylocella silvestris BL2 7090864 YP_002362061.1 CDS Msil_1753 NC_011666.1 1907925 1908218 D KEGG: mrd:Mrad2831_2067 hypothetical protein; hypothetical protein 1907925..1908218 Methylocella silvestris BL2 7090865 YP_002362062.1 CDS Msil_1754 NC_011666.1 1908534 1909460 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cyt:cce_1768 probable transcriptional regulator; AraC family transcriptional regulator 1908534..1909460 Methylocella silvestris BL2 7090866 YP_002362063.1 CDS Msil_1755 NC_011666.1 1909572 1910273 R KEGG: bid:Bind_2400 periplasmic protein-like protein; periplasmic protein-like protein complement(1909572..1910273) Methylocella silvestris BL2 7090867 YP_002362064.1 CDS Msil_1756 NC_011666.1 1910432 1911361 R KEGG: bid:Bind_3139 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase type 3; phosphoserine phosphatase SerB complement(1910432..1911361) Methylocella silvestris BL2 7090868 YP_002362065.1 CDS Msil_1757 NC_011666.1 1911459 1912334 R KEGG: bra:BRADO1299 putative general secretion pathway protein K; putative general secretion pathway protein K complement(1911459..1912334) Methylocella silvestris BL2 7090869 YP_002362066.1 CDS Msil_1758 NC_011666.1 1912689 1916651 D KEGG: nha:Nham_0836 hypothetical protein; hypothetical protein 1912689..1916651 Methylocella silvestris BL2 7090870 YP_002362067.1 CDS Msil_1759 NC_011666.1 1916919 1918091 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 1916919..1918091 Methylocella silvestris BL2 7090871 YP_002362068.1 CDS Msil_1760 NC_011666.1 1918178 1919773 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1918178..1919773 Methylocella silvestris BL2 7090872 YP_002362069.1 CDS Msil_1761 NC_011666.1 1919840 1920700 R PFAM: Aldose 1-epimerase; KEGG: bra:BRADO2126 hypothetical protein; aldose 1-epimerase complement(1919840..1920700) Methylocella silvestris BL2 7090873 YP_002362070.1 CDS Msil_1762 NC_011666.1 1920761 1921726 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mrd:Mrad2831_2395 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1920761..1921726) Methylocella silvestris BL2 7090874 YP_002362071.1 CDS Msil_1763 NC_011666.1 1921807 1922145 D KEGG: met:M446_0504 hypothetical protein; hypothetical protein 1921807..1922145 Methylocella silvestris BL2 7090875 YP_002362072.1 CDS Msil_1764 NC_011666.1 1922354 1922779 D TIGRFAM: nitrogenase-associated protein; PFAM: arsenate reductase and related; KEGG: bid:Bind_0471 nitrogenase-associated protein; nitrogenase-associated protein 1922354..1922779 Methylocella silvestris BL2 7090876 YP_002362073.1 CDS Msil_1765 NC_011666.1 1922852 1923160 D KEGG: bbt:BBta_5892 hypothetical protein; hypothetical protein 1922852..1923160 Methylocella silvestris BL2 7090877 YP_002362074.1 CDS Msil_1766 NC_011666.1 1923189 1923356 D KEGG: bra:BRADO5407 hypothetical protein; hypothetical protein 1923189..1923356 Methylocella silvestris BL2 7090878 YP_002362075.1 CDS Msil_1767 NC_011666.1 1923359 1923772 D PFAM: globin; KEGG: bbt:BBta_5890 putative hemoglobin protein (truncated hemoglobin); globin 1923359..1923772 Methylocella silvestris BL2 7090879 YP_002362076.1 CDS Msil_1768 NC_011666.1 1923776 1924876 R TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: bid:Bind_2181 membrane protein AbrB duplication; membrane protein complement(1923776..1924876) Methylocella silvestris BL2 7090880 YP_002362077.1 CDS Msil_1769 NC_011666.1 1924878 1925447 R PFAM: isochorismatase hydrolase; KEGG: bid:Bind_2180 isochorismatase hydrolase; isochorismatase hydrolase complement(1924878..1925447) Methylocella silvestris BL2 7090881 YP_002362078.1 CDS Msil_1770 NC_011666.1 1925555 1926166 D PFAM: regulatory protein TetR; KEGG: bid:Bind_2179 transcriptional regulator, TetR family; TetR family transcriptional regulator 1925555..1926166 Methylocella silvestris BL2 7090882 YP_002362079.1 CDS Msil_1771 NC_011666.1 1926232 1927944 R PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: azc:AZC_3408 ATPase; ATPase AAA complement(1926232..1927944) Methylocella silvestris BL2 7090883 YP_002362080.1 CDS Msil_1772 NC_011666.1 1927941 1929551 R KEGG: mag:amb0269 nitroreductase; nitroreductase complement(1927941..1929551) Methylocella silvestris BL2 7090884 YP_002362081.1 CDS Msil_1773 NC_011666.1 1929723 1930061 D KEGG: bid:Bind_1223 hypothetical protein; hypothetical protein 1929723..1930061 Methylocella silvestris BL2 7090885 YP_002362082.1 CDS Msil_1774 NC_011666.1 1936441 1937073 D KEGG: rpb:RPB_0321 OmpA/MotB; hypothetical protein 1936441..1937073 Methylocella silvestris BL2 7090891 YP_002362083.1 CDS Msil_1775 NC_011666.1 1937136 1937426 D KEGG: bbr:BB1269 hypothetical protein; hypothetical protein 1937136..1937426 Methylocella silvestris BL2 7090892 YP_002362084.1 CDS Msil_1776 NC_011666.1 1937462 1938571 R PFAM: extracellular solute-binding protein family 1; KEGG: met:M446_4922 extracellular solute-binding protein family 1; family 1 extracellular solute-binding protein complement(1937462..1938571) Methylocella silvestris BL2 7090893 YP_002362085.1 CDS Msil_1777 NC_011666.1 1938844 1939278 D PFAM: protein of unknown function DUF336; KEGG: mrd:Mrad2831_4389 protein of unknown function DUF336; hypothetical protein 1938844..1939278 Methylocella silvestris BL2 7090894 YP_002362086.1 CDS Msil_1778 NC_011666.1 1939295 1939849 D PFAM: cobalbumin biosynthesis protein; KEGG: bid:Bind_3597 cobalbumin biosynthesis protein; adenosylcobinamide kinase 1939295..1939849 Methylocella silvestris BL2 7090895 YP_002362087.1 CDS Msil_1779 NC_011666.1 1939956 1940864 D with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 1939956..1940864 Methylocella silvestris BL2 7090896 YP_002362088.1 CDS Msil_1780 NC_011666.1 1940864 1942807 D KEGG: bid:Bind_0070 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; adenylylsulfate kinase; elongation factor Tu domain 2 protein; sulfate adenylyltransferase, large subunit 1940864..1942807 Methylocella silvestris BL2 7090897 YP_002362089.1 CDS Msil_1781 NC_011666.1 1942903 1943154 R KEGG: bid:Bind_3108 hypothetical protein; hypothetical protein complement(1942903..1943154) Methylocella silvestris BL2 7090898 YP_002362090.1 CDS Msil_1782 NC_011666.1 1943272 1944312 R PFAM: high-affinity nickel-transporter; KEGG: bid:Bind_0081 high-affinity nickel-transporter; high-affinity nickel-transporter complement(1943272..1944312) Methylocella silvestris BL2 7090899 YP_002362091.1 CDS Msil_1783 NC_011666.1 1944320 1944955 R PFAM: protein of unknown function DUF1007; KEGG: bid:Bind_0082 protein of unknown function DUF1007; hypothetical protein complement(1944320..1944955) Methylocella silvestris BL2 7090900 YP_002362092.1 CDS Msil_1784 NC_011666.1 1945092 1946672 R Catalyzes the reduction of sulfite to sulfide, an essential step in the anaerobic sulfate-respiration pathway; sulfite reductase complement(1945092..1946672) Methylocella silvestris BL2 7090901 YP_002362093.1 CDS nirA NC_011666.1 1946669 1948441 R ferredoxin-dependent assimilatory nitrite reductase; ferredoxin-nitrite reductase complement(1946669..1948441) Methylocella silvestris BL2 7090902 YP_002362094.1 CDS rpmJ NC_011666.1 1948650 1948775 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 1948650..1948775 Methylocella silvestris BL2 7090903 YP_002362095.1 CDS Msil_1787 NC_011666.1 1948898 1949770 D PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: bid:Bind_0086 tetratricopeptide TPR_2 repeat protein; hypothetical protein 1948898..1949770 Methylocella silvestris BL2 7090904 YP_002362096.1 CDS Msil_1788 NC_011666.1 1949811 1950383 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: xau:Xaut_1444 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(1949811..1950383) Methylocella silvestris BL2 7090905 YP_002362097.1 CDS Msil_1789 NC_011666.1 1950610 1951782 R KEGG: sus:Acid_2913 hypothetical protein; hypothetical protein complement(1950610..1951782) Methylocella silvestris BL2 7090906 YP_002362098.1 CDS Msil_1790 NC_011666.1 1951973 1953388 R PFAM: Citrate transporter; KEGG: rpt:Rpal_2979 citrate transporter; citrate transporter complement(1951973..1953388) Methylocella silvestris BL2 7090907 YP_002362099.1 CDS Msil_1791 NC_011666.1 1953560 1954213 D PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: cja:CJA_0630 hypothetical protein; multiple antibiotic resistance (MarC)-like protein 1953560..1954213 Methylocella silvestris BL2 7090908 YP_002362100.1 CDS Msil_1792 NC_011666.1 1954371 1956032 D TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; KEGG: azc:AZC_2290 putative Na+/phosphate symporter; Na/Pi-cotransporter II-like protein 1954371..1956032 Methylocella silvestris BL2 7090909 YP_002362101.1 CDS Msil_1794 NC_011666.1 1956624 1957346 D TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: bid:Bind_0456 6-phosphogluconolactonase; 6-phosphogluconolactonase 1956624..1957346 Methylocella silvestris BL2 7090911 YP_002362102.1 CDS Msil_1795 NC_011666.1 1957575 1957835 D hypothetical protein 1957575..1957835 Methylocella silvestris BL2 7090912 YP_002362103.1 CDS Msil_1796 NC_011666.1 1958184 1958468 D KEGG: bid:Bind_3101 hypothetical protein; hypothetical protein 1958184..1958468 Methylocella silvestris BL2 7090913 YP_002362104.1 CDS Msil_1797 NC_011666.1 1958437 1958976 D TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: met:M446_1621 cytidine deaminase; cytidine deaminase 1958437..1958976 Methylocella silvestris BL2 7090914 YP_002362105.1 CDS Msil_1798 NC_011666.1 1959078 1959287 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bid:Bind_3098 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein complement(1959078..1959287) Methylocella silvestris BL2 7090915 YP_002362106.1 CDS Msil_1799 NC_011666.1 1959879 1960415 D TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mpo:Mpop_1445 formaldehyde-activating enzyme; formaldehyde-activating protein 1959879..1960415 Methylocella silvestris BL2 7090916 YP_002362107.1 CDS Msil_1800 NC_011666.1 1960437 1961063 R PFAM: nitroreductase; KEGG: xau:Xaut_0191 nitroreductase; nitroreductase complement(1960437..1961063) Methylocella silvestris BL2 7090917 YP_002362108.1 CDS Msil_1801 NC_011666.1 1961157 1962149 D KEGG: mrd:Mrad2831_3601 beta-lactamase domain protein; beta-lactamase domain-containing protein 1961157..1962149 Methylocella silvestris BL2 7090918 YP_002362109.1 CDS Msil_1802 NC_011666.1 1962336 1963391 D KEGG: reh:H16_B2414 hypothetical protein; hypothetical protein 1962336..1963391 Methylocella silvestris BL2 7090919 YP_002362110.1 CDS Msil_1803 NC_011666.1 1963420 1964790 R KEGG: acr:Acry_0996 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 complement(1963420..1964790) Methylocella silvestris BL2 7090920 YP_002362111.1 CDS Msil_1804 NC_011666.1 1964864 1965826 R KEGG: rfr:Rfer_3496 hypothetical protein; hypothetical protein complement(1964864..1965826) Methylocella silvestris BL2 7090921 YP_002362112.1 CDS Msil_1805 NC_011666.1 1966089 1966832 D PFAM: glutamine amidotransferase class-I; KEGG: rpe:RPE_0838 glutamine amidotransferase class-I; glutamine amidotransferase 1966089..1966832 Methylocella silvestris BL2 7090922 YP_002362113.1 CDS Msil_1806 NC_011666.1 1966939 1967352 R PFAM: protein of unknown function DUF1236; KEGG: met:M446_1280 protein of unknown function DUF1236; hypothetical protein complement(1966939..1967352) Methylocella silvestris BL2 7090923 YP_002362114.1 CDS Msil_1807 NC_011666.1 1967657 1968394 D PFAM: protein of unknown function DUF1236; KEGG: met:M446_4588 protein of unknown function DUF1236; hypothetical protein 1967657..1968394 Methylocella silvestris BL2 7090924 YP_002362115.1 CDS Msil_1808 NC_011666.1 1968480 1969325 R KEGG: oan:Oant_3856 protein of unknown function DUF451; hypothetical protein complement(1968480..1969325) Methylocella silvestris BL2 7090925 YP_002362116.1 CDS Msil_1809 NC_011666.1 1969442 1970743 R TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: psb:Psyr_3369 twin-arginine translocation pathway signal:Tat-translocated enzyme:Dyp-type peroxidase; Dyp-type peroxidase family protein complement(1969442..1970743) Methylocella silvestris BL2 7090926 YP_002362117.1 CDS Msil_1810 NC_011666.1 1970748 1971908 R KEGG: oan:Oant_3858 protein of unknown function DUF451; hypothetical protein complement(1970748..1971908) Methylocella silvestris BL2 7090927 YP_002362118.1 CDS Msil_1811 NC_011666.1 1971912 1972763 R PFAM: iron permease FTR1; KEGG: oan:Oant_3859 iron permease FTR1; iron permease FTR1 complement(1971912..1972763) Methylocella silvestris BL2 7090928 YP_002362119.1 CDS Msil_1812 NC_011666.1 1973130 1973543 D KEGG: bra:BRADO5081 2Fe-2S ferredoxin (FdII); hypothetical protein 1973130..1973543 Methylocella silvestris BL2 7092867 YP_002362120.1 CDS Msil_1813 NC_011666.1 1973527 1974249 R KEGG: gdi:GDI0791 hypothetical protein; hypothetical protein complement(1973527..1974249) Methylocella silvestris BL2 7094092 YP_002362121.1 CDS Msil_1814 NC_011666.1 1974344 1975912 R PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_6374 major facilitator transporter; major facilitator superfamily protein complement(1974344..1975912) Methylocella silvestris BL2 7094093 YP_002362122.1 CDS Msil_1815 NC_011666.1 1975909 1977081 R PFAM: secretion protein HlyD family protein; KEGG: bbt:BBta_1624 HlyD family secretion protein; secretion protein HlyD family protein complement(1975909..1977081) Methylocella silvestris BL2 7094094 YP_002362123.1 CDS Msil_1816 NC_011666.1 1977328 1977567 D KEGG: rpd:RPD_3442 hypothetical protein; hypothetical protein 1977328..1977567 Methylocella silvestris BL2 7094095 YP_002362124.1 CDS Msil_1817 NC_011666.1 1977710 1978099 R PFAM: 4-oxalocrotonate tautomerase; KEGG: mex:Mext_2146 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(1977710..1978099) Methylocella silvestris BL2 7094096 YP_002362125.1 CDS Msil_1818 NC_011666.1 1978198 1980126 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(1978198..1980126) Methylocella silvestris BL2 7094097 YP_002362126.1 CDS Msil_1819 NC_011666.1 1980422 1983193 D PFAM: phosphoenolpyruvate carboxylase; KEGG: bid:Bind_0138 phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 1980422..1983193 Methylocella silvestris BL2 7094098 YP_002362127.1 CDS Msil_1820 NC_011666.1 1983256 1984773 D TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Threonine dehydratase domain protein; Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: met:M446_3288 threonine dehydratase, biosynthetic; threonine dehydratase, biosynthetic 1983256..1984773 Methylocella silvestris BL2 7094099 YP_002362128.1 CDS Msil_1821 NC_011666.1 1984846 1985874 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ret:RHE_PC00106 alcohol dehydrogenase protein; alcohol dehydrogenase GroES domain-containing protein 1984846..1985874 Methylocella silvestris BL2 7094100 YP_002362129.1 CDS Msil_1822 NC_011666.1 1985948 1987699 R PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: met:M446_6101 poly-beta-hydroxybutyrate polymerase domain protein; poly-beta-hydroxybutyrate polymerase domain-containing protein complement(1985948..1987699) Methylocella silvestris BL2 7094101 YP_002362130.1 CDS Msil_1823 NC_011666.1 1987800 1988504 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: cak:Caul_0629 transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator complement(1987800..1988504) Methylocella silvestris BL2 7094102 YP_002362131.1 CDS Msil_1824 NC_011666.1 1988628 1989002 R PFAM: response regulator receiver; KEGG: mrd:Mrad2831_3276 response regulator receiver protein; response regulator receiver protein complement(1988628..1989002) Methylocella silvestris BL2 7094103 YP_002362132.1 CDS Msil_1825 NC_011666.1 1989264 1989881 R PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: pzu:PHZ_c2804 response regulator; LuxR family transcriptional regulator complement(1989264..1989881) Methylocella silvestris BL2 7094104 YP_002362133.1 CDS Msil_1826 NC_011666.1 1989874 1991766 R KEGG: mrd:Mrad2831_3274 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase complement(1989874..1991766) Methylocella silvestris BL2 7094105 YP_002362134.1 CDS Msil_1827 NC_011666.1 1991993 1993030 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pzu:PHZ_p0136 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase GroES domain-containing protein 1991993..1993030 Methylocella silvestris BL2 7094106 YP_002362135.1 CDS Msil_1828 NC_011666.1 1993128 1994117 D PFAM: Luciferase-like monooxygenase; KEGG: bid:Bind_3549 luciferase-like monooxygenase; luciferase-like monooxygenase 1993128..1994117 Methylocella silvestris BL2 7094107 YP_002362136.1 CDS Msil_1829 NC_011666.1 1994394 1994672 D hypothetical protein 1994394..1994672 Methylocella silvestris BL2 7094108 YP_002362137.1 CDS Msil_1830 NC_011666.1 1994748 1995710 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bid:Bind_3672 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter complement(1994748..1995710) Methylocella silvestris BL2 7094109 YP_002362138.1 CDS Msil_1831 NC_011666.1 1995965 1997320 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bid:Bind_2253 MATE efflux family protein; MATE efflux family protein 1995965..1997320 Methylocella silvestris BL2 7094110 YP_002362139.1 CDS Msil_1832 NC_011666.1 1997358 1998215 D KEGG: bid:Bind_2252 hypothetical protein; hypothetical protein 1997358..1998215 Methylocella silvestris BL2 7094111 YP_002362140.1 CDS Msil_1833 NC_011666.1 1998448 1999830 D KEGG: bid:Bind_2251 glutamate--cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase GCS2; glutamate/cysteine ligase 1998448..1999830 Methylocella silvestris BL2 7094112 YP_002362141.1 CDS Msil_1834 NC_011666.1 2000193 2000519 D PFAM: SWIB/MDM2 domain protein; KEGG: bid:Bind_1274 SWIB/MDM2 domain protein; SWIB/MDM2 domain-containing protein 2000193..2000519 Methylocella silvestris BL2 7094113 YP_002362142.1 CDS rpmI NC_011666.1 2000889 2001089 D PFAM: ribosomal protein L35; KEGG: bid:Bind_3042 ribosomal protein L35; 50S ribosomal protein L35 2000889..2001089 Methylocella silvestris BL2 7094114 YP_002362143.1 CDS rplT NC_011666.1 2001152 2001511 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 2001152..2001511 Methylocella silvestris BL2 7094115 YP_002362144.1 CDS Msil_1837 NC_011666.1 2001611 2002030 R KEGG: met:M446_5369 hypothetical protein; hypothetical protein complement(2001611..2002030) Methylocella silvestris BL2 7094116 YP_002362145.1 CDS Msil_1838 NC_011666.1 2002035 2004467 R KEGG: bid:Bind_3247 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta complement(2002035..2004467) Methylocella silvestris BL2 7094117 YP_002362146.1 CDS Msil_1839 NC_011666.1 2004682 2005053 D KEGG: bid:Bind_3246 hypothetical protein; hypothetical protein 2004682..2005053 Methylocella silvestris BL2 7094118 YP_002362147.1 CDS Msil_1840 NC_011666.1 2005093 2005611 D PFAM: protein of unknown function DUF1332; KEGG: xau:Xaut_2028 hypothetical protein; hypothetical protein 2005093..2005611 Methylocella silvestris BL2 7094119 YP_002362148.1 CDS Msil_1841 NC_011666.1 2005681 2006481 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_3244 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2005681..2006481 Methylocella silvestris BL2 7094120 YP_002362149.1 CDS Msil_1842 NC_011666.1 2006507 2007286 D Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 2006507..2007286 Methylocella silvestris BL2 7094121 YP_002362150.1 CDS Msil_1843 NC_011666.1 2007490 2007933 D KEGG: atc:AGR_L_1520 hypothetical protein; hypothetical protein 2007490..2007933 Methylocella silvestris BL2 7094122 YP_002362151.1 CDS Msil_1844 NC_011666.1 2008158 2008997 D PFAM: formate/nitrite transporter; KEGG: mpo:Mpop_3185 formate/nitrite transporter; formate/nitrite transporter 2008158..2008997 Methylocella silvestris BL2 7094123 YP_002362152.1 CDS Msil_1845 NC_011666.1 2009006 2009869 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: mlo:mll1137 hypothetical protein; hypothetical protein complement(2009006..2009869) Methylocella silvestris BL2 7094124 YP_002362153.1 CDS Msil_1846 NC_011666.1 2009952 2011373 D PFAM: regulatory protein GntR HTH; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: mlo:mlr1139 transcriptional regulator; GntR family transcriptional regulator 2009952..2011373 Methylocella silvestris BL2 7094125 YP_002362154.1 CDS Msil_1847 NC_011666.1 2011377 2012321 R PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bid:Bind_3407 integrase family protein; integrase family protein complement(2011377..2012321) Methylocella silvestris BL2 7094126 YP_002362155.1 CDS Msil_1848 NC_011666.1 2012409 2012552 R KEGG: mpo:Mpop_2439 hypothetical protein; hypothetical protein complement(2012409..2012552) Methylocella silvestris BL2 7094127 YP_002362156.1 CDS Msil_1849 NC_011666.1 2012655 2013956 R KEGG: bid:Bind_3405 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein complement(2012655..2013956) Methylocella silvestris BL2 7094128 YP_002362157.1 CDS Msil_1850 NC_011666.1 2013953 2014825 R PFAM: diaminopimelate epimerase; KEGG: bid:Bind_3404 diaminopimelate epimerase; diaminopimelate epimerase complement(2013953..2014825) Methylocella silvestris BL2 7094129 YP_002362158.1 CDS Msil_1851 NC_011666.1 2015004 2015729 D PFAM: transcription activator effector binding; KEGG: bid:Bind_3021 transcription activator effector binding; transcription activator effector binding protein 2015004..2015729 Methylocella silvestris BL2 7094130 YP_002362159.1 CDS Msil_1852 NC_011666.1 2015926 2017089 R KEGG: pan:PODANSg6055 hypothetical protein; hypothetical protein complement(2015926..2017089) Methylocella silvestris BL2 7094131 YP_002362160.1 CDS Msil_1853 NC_011666.1 2017371 2018255 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ava:Ava_C0027 AraC family transcriptional regulator; AraC family transcriptional regulator 2017371..2018255 Methylocella silvestris BL2 7094132 YP_002362161.1 CDS Msil_1854 NC_011666.1 2018373 2019764 R PFAM: Citrate transporter; KEGG: azc:AZC_2510 H+/gluconate symporter; citrate transporter complement(2018373..2019764) Methylocella silvestris BL2 7094133 YP_002362162.1 CDS Msil_1855 NC_011666.1 2020031 2020684 D KEGG: lch:Lcho_2490 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 2020031..2020684 Methylocella silvestris BL2 7094134 YP_002362163.1 CDS Msil_1856 NC_011666.1 2020684 2021352 D KEGG: bid:Bind_3274 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 2020684..2021352 Methylocella silvestris BL2 7094135 YP_002362164.1 CDS Msil_1857 NC_011666.1 2021366 2022187 R KEGG: bid:Bind_3592 hypothetical protein; hypothetical protein complement(2021366..2022187) Methylocella silvestris BL2 7094136 YP_002362165.1 CDS Msil_1858 NC_011666.1 2022484 2023257 D KEGG: bid:Bind_1093 hypothetical protein; hypothetical protein 2022484..2023257 Methylocella silvestris BL2 7094137 YP_002362166.1 CDS Msil_1859 NC_011666.1 2023297 2024946 R PFAM: phosphoglucose isomerase (PGI); KEGG: bid:Bind_2735 glucose-6-phosphate isomerase; glucose-6-phosphate isomerase complement(2023297..2024946) Methylocella silvestris BL2 7094138 YP_002362167.1 CDS Msil_1860 NC_011666.1 2025113 2026633 R TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: bid:Bind_2734 ammonium transporter; ammonium transporter complement(2025113..2026633) Methylocella silvestris BL2 7094139 YP_002362168.1 CDS Msil_1861 NC_011666.1 2026669 2027007 R PFAM: nitrogen regulatory protein P-II; KEGG: bid:Bind_2733 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(2026669..2027007) Methylocella silvestris BL2 7094140 YP_002362169.1 CDS Msil_1862 NC_011666.1 2027430 2028341 R KEGG: met:M446_5500 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase II complement(2027430..2028341) Methylocella silvestris BL2 7094141 YP_002362170.1 CDS Msil_1863 NC_011666.1 2028548 2028757 R PFAM: protein of unknown function DUF343; KEGG: bid:Bind_2731 protein of unknown function DUF343; hypothetical protein complement(2028548..2028757) Methylocella silvestris BL2 7094142 YP_002362171.1 CDS Msil_1864 NC_011666.1 2028832 2029491 R PFAM: peptidase S16 lon domain protein; KEGG: bid:Bind_2793 peptidase S16 lon domain protein; peptidase S16 lon domain-containing protein complement(2028832..2029491) Methylocella silvestris BL2 7094143 YP_002362172.1 CDS Msil_1865 NC_011666.1 2029607 2030527 R TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bid:Bind_2792 thioredoxin; thioredoxin complement(2029607..2030527) Methylocella silvestris BL2 7094144 YP_002362173.1 CDS Msil_1866 NC_011666.1 2030871 2031878 D PFAM: metallophosphoesterase; KEGG: hch:HCH_04892 phosphohydrolase; metallophosphoesterase 2030871..2031878 Methylocella silvestris BL2 7094145 YP_002362174.1 CDS Msil_1867 NC_011666.1 2032117 2032362 D KEGG: bra:BRADO1846 hypothetical protein; hypothetical protein 2032117..2032362 Methylocella silvestris BL2 7094146 YP_002362175.1 CDS Msil_1868 NC_011666.1 2032385 2032873 R PFAM: protein of unknown function DUF46; KEGG: mca:MCA0197 hypothetical protein; hypothetical protein complement(2032385..2032873) Methylocella silvestris BL2 7094147 YP_002362176.1 CDS Msil_1869 NC_011666.1 2032940 2033854 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase complement(2032940..2033854) Methylocella silvestris BL2 7094148 YP_002362177.1 CDS Msil_1870 NC_011666.1 2034090 2034752 R PFAM: regulatory protein TetR; KEGG: dvu:DVU0057 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2034090..2034752) Methylocella silvestris BL2 7094149 YP_002362178.1 CDS Msil_1871 NC_011666.1 2034749 2035465 R KEGG: ank:AnaeK_4341 hypothetical protein; hypothetical protein complement(2034749..2035465) Methylocella silvestris BL2 7094150 YP_002362179.1 CDS rpsI NC_011666.1 2035764 2036243 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(2035764..2036243) Methylocella silvestris BL2 7094151 YP_002362180.1 CDS Msil_1873 NC_011666.1 2036246 2036716 R PFAM: ribosomal protein L13; KEGG: bid:Bind_1378 ribosomal protein L13; 50S ribosomal protein L13 complement(2036246..2036716) Methylocella silvestris BL2 7094152 YP_002362181.1 CDS Msil_1874 NC_011666.1 2036907 2037335 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: mex:Mext_1685 cupin 2 conserved barrel domain protein; cupin complement(2036907..2037335) Methylocella silvestris BL2 7094153 YP_002362182.1 CDS Msil_1875 NC_011666.1 2037406 2037849 D PFAM: CoA-binding domain protein; KEGG: mex:Mext_2489 CoA-binding domain protein; CoA-binding domain-containing protein 2037406..2037849 Methylocella silvestris BL2 7094154 YP_002362183.1 CDS Msil_1876 NC_011666.1 2037854 2038243 R PFAM: PilT protein domain protein; KEGG: rpb:RPB_3729 PilT protein-like; PilT protein domain-containing protein complement(2037854..2038243) Methylocella silvestris BL2 7094155 YP_002362184.1 CDS Msil_1877 NC_011666.1 2038252 2038515 R KEGG: rpb:RPB_3730 SpoVT/AbrB-like; SpoVT/AbrB-like protein complement(2038252..2038515) Methylocella silvestris BL2 7094156 YP_002362185.1 CDS Msil_1878 NC_011666.1 2038546 2039625 R PFAM: cytochrome oxidase assembly; KEGG: bid:Bind_0808 cytochrome oxidase assembly; cytochrome oxidase assembly complement(2038546..2039625) Methylocella silvestris BL2 7094157 YP_002362186.1 CDS Msil_1879 NC_011666.1 2039805 2040014 D KEGG: bid:Bind_0807 hypothetical protein; hypothetical protein 2039805..2040014 Methylocella silvestris BL2 7094158 YP_002362187.1 CDS Msil_1880 NC_011666.1 2040018 2041451 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: bid:Bind_0806 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein complement(2040018..2041451) Methylocella silvestris BL2 7094159 YP_002362188.1 CDS Msil_1881 NC_011666.1 2041540 2042496 R PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: bid:Bind_0805 methenyltetrahydrofolate cyclohydrolase; methenyltetrahydrofolate cyclohydrolase complement(2041540..2042496) Methylocella silvestris BL2 7094160 YP_002362189.1 CDS Msil_1882 NC_011666.1 2042698 2044845 R PFAM: Lytic transglycosylase catalytic; KEGG: rca:Rcas_2317 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; lytic transglycosylase complement(2042698..2044845) Methylocella silvestris BL2 7094161 YP_002362190.1 CDS Msil_1883 NC_011666.1 2044980 2045975 R PFAM: Aldose 1-epimerase; KEGG: bid:Bind_0803 aldose 1-epimerase; aldose 1-epimerase complement(2044980..2045975) Methylocella silvestris BL2 7094162 YP_002362191.1 CDS Msil_1884 NC_011666.1 2046093 2046452 D KEGG: bid:Bind_1710 hypothetical protein; hypothetical protein 2046093..2046452 Methylocella silvestris BL2 7094163 YP_002362192.1 CDS Msil_1885 NC_011666.1 2046615 2048993 D PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpd:RPD_1003 adenylyl cyclase class-3/4/guanylyl cyclase; multi-sensor signal transduction histidine kinase 2046615..2048993 Methylocella silvestris BL2 7094164 YP_002362193.1 CDS Msil_1886 NC_011666.1 2049016 2050926 R PFAM: peptidase S15; peptidase S9 prolyl oligopeptidase active site domain protein; dienelactone hydrolase; KEGG: mex:Mext_0301 peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase active site domain-containing protein complement(2049016..2050926) Methylocella silvestris BL2 7094165 YP_002362194.1 CDS Msil_1887 NC_011666.1 2051251 2052462 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; KEGG: lch:Lcho_0045 adenylate/guanylate cyclase; adenylate/guanylate cyclase 2051251..2052462 Methylocella silvestris BL2 7094166 YP_002362195.1 CDS Msil_1888 NC_011666.1 2052475 2053422 D hypothetical protein 2052475..2053422 Methylocella silvestris BL2 7094167 YP_002362196.1 CDS Msil_1889 NC_011666.1 2053789 2054319 D KEGG: pna:Pnap_1785 hypothetical protein; hypothetical protein 2053789..2054319 Methylocella silvestris BL2 7094168 YP_002362197.1 CDS Msil_1890 NC_011666.1 2054454 2054975 D KEGG: bid:Bind_2794 hypothetical protein; hypothetical protein 2054454..2054975 Methylocella silvestris BL2 7094169 YP_002362198.1 CDS Msil_1891 NC_011666.1 2055003 2056481 D KEGG: bbt:BBta_7846 hypothetical protein; hypothetical protein 2055003..2056481 Methylocella silvestris BL2 7094170 YP_002362199.1 CDS Msil_1892 NC_011666.1 2056487 2059582 R PFAM: acriflavin resistance protein; KEGG: rpb:RPB_0894 acriflavin resistance protein; acriflavin resistance protein complement(2056487..2059582) Methylocella silvestris BL2 7094171 YP_002362200.1 CDS Msil_1893 NC_011666.1 2059582 2060637 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: nha:Nham_3611 secretion protein HlyD; RND family efflux transporter MFP subunit complement(2059582..2060637) Methylocella silvestris BL2 7094172 YP_002362201.1 CDS Msil_1894 NC_011666.1 2060778 2062349 R PFAM: protein of unknown function DUF323; peptidase C14 caspase catalytic subunit p20; KEGG: met:M446_5032 protein of unknown function DUF323; hypothetical protein complement(2060778..2062349) Methylocella silvestris BL2 7091092 YP_002362202.1 CDS Msil_1895 NC_011666.1 2062816 2064456 D PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bid:Bind_1443 radical SAM domain protein; radical SAM protein 2062816..2064456 Methylocella silvestris BL2 7094011 YP_002362203.1 CDS Msil_1896 NC_011666.1 2064712 2067054 D TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: bid:Bind_0073 outer membrane autotransporter barrel domain protein; outer membrane autotransporter barrel domain-containing protein 2064712..2067054 Methylocella silvestris BL2 7094012 YP_002362204.1 CDS Msil_1897 NC_011666.1 2067128 2067595 R PFAM: protein of unknown function DUF985; KEGG: bja:blr0223 hypothetical protein; hypothetical protein complement(2067128..2067595) Methylocella silvestris BL2 7094013 YP_002362205.1 CDS Msil_1898 NC_011666.1 2067592 2068362 R KEGG: bid:Bind_0430 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase complement(2067592..2068362) Methylocella silvestris BL2 7094014 YP_002362206.1 CDS Msil_1899 NC_011666.1 2068576 2069322 D KEGG: bid:Bind_0431 methyltransferase type 11; type 11 methyltransferase 2068576..2069322 Methylocella silvestris BL2 7094015 YP_002362207.1 CDS Msil_1900 NC_011666.1 2069323 2070030 R PFAM: phospholipase/Carboxylesterase; KEGG: bid:Bind_0432 phospholipase/carboxylesterase; phospholipase/carboxylesterase complement(2069323..2070030) Methylocella silvestris BL2 7094016 YP_002362208.1 CDS Msil_1901 NC_011666.1 2070388 2070603 D KEGG: bid:Bind_0599 hypothetical protein; hypothetical protein 2070388..2070603 Methylocella silvestris BL2 7094017 YP_002362209.1 CDS Msil_1902 NC_011666.1 2070613 2071020 R TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: mlo:mlr3964 transcriptional regulator, putative; methionine-R-sulfoxide reductase complement(2070613..2071020) Methylocella silvestris BL2 7094018 YP_002362210.1 CDS Msil_1903 NC_011666.1 2071141 2071356 R hypothetical protein complement(2071141..2071356) Methylocella silvestris BL2 7094019 YP_002362211.1 CDS Msil_1904 NC_011666.1 2071647 2072984 D PFAM: N-6 Adenine-specific DNA methylase; KEGG: hau:Haur_2389 hypothetical protein; N-6 Adenine-specific DNA methylase 2071647..2072984 Methylocella silvestris BL2 7094020 YP_002362212.1 CDS Msil_1905 NC_011666.1 2072991 2075456 R KEGG: bid:Bind_0819 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B complement(2072991..2075456) Methylocella silvestris BL2 7094021 YP_002362213.1 CDS Msil_1906 NC_011666.1 2075627 2076076 R KEGG: nmn:NMCC_0222 putative inner membrane protein; putative inner membrane protein complement(2075627..2076076) Methylocella silvestris BL2 7094022 YP_002362214.1 CDS Msil_1907 NC_011666.1 2076449 2079043 R KEGG: bid:Bind_0823 ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent chaperone ClpB complement(2076449..2079043) Methylocella silvestris BL2 7094023 YP_002362215.1 CDS Msil_1908 NC_011666.1 2079419 2080456 R KEGG: bid:Bind_0824 hypothetical protein; hypothetical protein complement(2079419..2080456) Methylocella silvestris BL2 7094024 YP_002362216.1 CDS Msil_1909 NC_011666.1 2080900 2081790 R TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; KEGG: bid:Bind_0825 protein-(glutamine-N5) methyltransferase, release factor-specific; protein-(glutamine-N5) methyltransferase complement(2080900..2081790) Methylocella silvestris BL2 7094025 YP_002362217.1 CDS Msil_1910 NC_011666.1 2081817 2083769 R molecular chaperone; heat shock protein 90 complement(2081817..2083769) Methylocella silvestris BL2 7094026 YP_002362218.1 CDS Msil_1911 NC_011666.1 2084051 2084440 D KEGG: bid:Bind_0827 hypothetical protein; hypothetical protein 2084051..2084440 Methylocella silvestris BL2 7094027 YP_002362219.1 CDS Msil_1912 NC_011666.1 2084509 2085294 R PFAM: protein of unknown function UPF0005; KEGG: bid:Bind_0828 protein of unknown function UPF0005; hypothetical protein complement(2084509..2085294) Methylocella silvestris BL2 7094028 YP_002362220.1 CDS Msil_1913 NC_011666.1 2085534 2088182 R PFAM: protein of unknown function DUF214; KEGG: bid:Bind_0829 protein of unknown function DUF214; hypothetical protein complement(2085534..2088182) Methylocella silvestris BL2 7094029 YP_002362221.1 CDS Msil_1914 NC_011666.1 2088227 2088547 R KEGG: met:M446_6465 cupin 2 conserved barrel domain protein; cupin complement(2088227..2088547) Methylocella silvestris BL2 7094030 YP_002362222.1 CDS Msil_1915 NC_011666.1 2088566 2089057 R PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bid:Bind_2078 protein of unknown function DUF395 YeeE/YedE; hypothetical protein complement(2088566..2089057) Methylocella silvestris BL2 7094031 YP_002362223.1 CDS Msil_1916 NC_011666.1 2089054 2089476 R PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rle:RL1132 putative transmembrane protein; hypothetical protein complement(2089054..2089476) Methylocella silvestris BL2 7094032 YP_002362224.1 CDS Msil_1917 NC_011666.1 2089639 2090211 R PFAM: isochorismatase hydrolase; KEGG: bid:Bind_1247 isochorismatase hydrolase; isochorismatase hydrolase complement(2089639..2090211) Methylocella silvestris BL2 7094033 YP_002362225.1 CDS Msil_1918 NC_011666.1 2090325 2091308 D PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bid:Bind_1246 transcriptional regulator, AraC family; AraC family transcriptional regulator 2090325..2091308 Methylocella silvestris BL2 7094034 YP_002362226.1 CDS Msil_1919 NC_011666.1 2091395 2091886 D KEGG: bph:Bphy_3234 hypothetical protein; hypothetical protein 2091395..2091886 Methylocella silvestris BL2 7094035 YP_002362227.1 CDS Msil_1920 NC_011666.1 2091883 2092590 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bid:Bind_0830 ABC transporter related; ABC transporter-like protein complement(2091883..2092590) Methylocella silvestris BL2 7094036 YP_002362228.1 CDS Msil_1921 NC_011666.1 2092761 2093357 D PFAM: lipolytic protein G-D-S-L family; KEGG: bid:Bind_0831 lipolytic protein G-D-S-L family; G-D-S-L family lipolytic protein 2092761..2093357 Methylocella silvestris BL2 7094037 YP_002362229.1 CDS Msil_1922 NC_011666.1 2093474 2094007 D TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; KEGG: bid:Bind_0832 2'-5' RNA ligase; 2'-5' RNA ligase 2093474..2094007 Methylocella silvestris BL2 7094038 YP_002362230.1 CDS Msil_1923 NC_011666.1 2094503 2094913 D KEGG: bid:Bind_1669 hypothetical protein; hypothetical protein 2094503..2094913 Methylocella silvestris BL2 7094039 YP_002362231.1 CDS Msil_1924 NC_011666.1 2095185 2096093 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gbe:GbCGDNIH1_1773 transcriptional regulators, LysR family; LysR family transcriptional regulator complement(2095185..2096093) Methylocella silvestris BL2 7094040 YP_002362232.1 CDS Msil_1925 NC_011666.1 2096200 2097027 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gbe:GbCGDNIH1_1772 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2096200..2097027 Methylocella silvestris BL2 7094041 YP_002362233.1 CDS Msil_1926 NC_011666.1 2097259 2098656 R PFAM: cytochrome P450; KEGG: bid:Bind_0833 cytochrome P450; cytochrome P450 complement(2097259..2098656) Methylocella silvestris BL2 7094042 YP_002362234.1 CDS Msil_1927 NC_011666.1 2098881 2100149 D KEGG: sen:SACE_7046 hypothetical protein; hypothetical protein 2098881..2100149 Methylocella silvestris BL2 7094043 YP_002362235.1 CDS Msil_1928 NC_011666.1 2100633 2100821 R hypothetical protein complement(2100633..2100821) Methylocella silvestris BL2 7094044 YP_002362236.1 CDS Msil_1929 NC_011666.1 2101161 2101412 R hypothetical protein complement(2101161..2101412) Methylocella silvestris BL2 7094045 YP_002362237.1 CDS Msil_1930 NC_011666.1 2101925 2102107 D KEGG: rpt:Rpal_2412 hypothetical protein; hypothetical protein 2101925..2102107 Methylocella silvestris BL2 7094046 YP_002362238.1 CDS Msil_1931 NC_011666.1 2102104 2103012 D PFAM: periplasmic binding protein; KEGG: mrd:Mrad2831_4588 periplasmic binding protein; periplasmic binding protein 2102104..2103012 Methylocella silvestris BL2 7094047 YP_002362239.1 CDS Msil_1932 NC_011666.1 2103009 2104079 D PFAM: transport system permease protein; KEGG: mrd:Mrad2831_4589 transport system permease protein; transport system permease 2103009..2104079 Methylocella silvestris BL2 7094048 YP_002362240.1 CDS Msil_1933 NC_011666.1 2104076 2104894 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mrd:Mrad2831_4590 ABC transporter related; ABC transporter-like protein 2104076..2104894 Methylocella silvestris BL2 7094049 YP_002362241.1 CDS Msil_1934 NC_011666.1 2104922 2105242 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bja:bll7423 hypothetical protein; antibiotic biosynthesis monooxygenase complement(2104922..2105242) Methylocella silvestris BL2 7094050 YP_002362242.1 CDS Msil_1935 NC_011666.1 2105273 2107441 R TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: met:M446_3446 TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent heme/hemoglobin receptor family protein complement(2105273..2107441) Methylocella silvestris BL2 7094051 YP_002362243.1 CDS Msil_1937 NC_011666.1 2108552 2108827 R PFAM: protein of unknown function DUF1153; KEGG: bid:Bind_3038 protein of unknown function DUF1153; hypothetical protein complement(2108552..2108827) Methylocella silvestris BL2 7094054 YP_002362244.1 CDS mnmA NC_011666.1 2109274 2110521 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2109274..2110521 Methylocella silvestris BL2 7094055 YP_002362245.1 CDS Msil_1939 NC_011666.1 2110626 2111288 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bid:Bind_3036 phosphatidylethanolamine N-methyltransferase; phosphatidylethanolamine N-methyltransferase 2110626..2111288 Methylocella silvestris BL2 7094056 YP_002362246.1 CDS Msil_1940 NC_011666.1 2111325 2111543 R PFAM: protein of unknown function DUF465; KEGG: bid:Bind_0442 protein of unknown function DUF465; hypothetical protein complement(2111325..2111543) Methylocella silvestris BL2 7094057 YP_002362247.1 CDS Msil_1941 NC_011666.1 2111813 2112001 D PFAM: protein of unknown function DUF465; KEGG: bid:Bind_0443 protein of unknown function DUF465; hypothetical protein 2111813..2112001 Methylocella silvestris BL2 7094058 YP_002362248.1 CDS Msil_1942 NC_011666.1 2112431 2114116 R PFAM: Resolvase domain; Recombinase; KEGG: nha:Nham_0568 recombinase; resolvase domain-containing protein complement(2112431..2114116) Methylocella silvestris BL2 7094060 YP_002362249.1 CDS Msil_1943 NC_011666.1 2114493 2114726 D hypothetical protein 2114493..2114726 Methylocella silvestris BL2 7094061 YP_002362250.1 CDS Msil_1945 NC_011666.1 2116955 2119804 D PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases; KEGG: cti:pRALTA_0671 putative DNA/RNA helicase, SNF2 family; helicase domain-containing protein 2116955..2119804 Methylocella silvestris BL2 7094063 YP_002362251.1 CDS Msil_1946 NC_011666.1 2119816 2121711 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: tex:Teth514_1828 site-specific DNA-methyltransferase (adenine-specific); adenine-specific DNA-methyltransferase 2119816..2121711 Methylocella silvestris BL2 7094064 YP_002362252.1 CDS Msil_1947 NC_011666.1 2121725 2122342 D KEGG: gur:Gura_2877 hypothetical protein; hypothetical protein 2121725..2122342 Methylocella silvestris BL2 7094065 YP_002362253.1 CDS Msil_1948 NC_011666.1 2122339 2125287 D PFAM: type III restriction protein res subunit; KEGG: cti:pRALTA_0002 putative type III restriction enzyme; type III restriction protein res subunit 2122339..2125287 Methylocella silvestris BL2 7094066 YP_002362254.1 CDS Msil_1949 NC_011666.1 2125309 2125665 R KEGG: mpo:Mpop_4132 hypothetical protein; hypothetical protein complement(2125309..2125665) Methylocella silvestris BL2 7094067 YP_002362255.1 CDS Msil_1950 NC_011666.1 2125662 2127077 R PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: cak:Caul_1999 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein complement(2125662..2127077) Methylocella silvestris BL2 7094068 YP_002362256.1 CDS Msil_1951 NC_011666.1 2127062 2127475 R KEGG: cak:Caul_1998 hypothetical protein; hypothetical protein complement(2127062..2127475) Methylocella silvestris BL2 7094069 YP_002362257.1 CDS Msil_1952 NC_011666.1 2127479 2127820 R KEGG: cak:Caul_1997 hypothetical protein; hypothetical protein complement(2127479..2127820) Methylocella silvestris BL2 7094070 YP_002362258.1 CDS Msil_1953 NC_011666.1 2127983 2128378 D PFAM: helix-turn-helix domain protein; KEGG: deh:cbdb_B6 hypothetical protein; XRE family transcriptional regulator 2127983..2128378 Methylocella silvestris BL2 7094071 YP_002362259.1 CDS Msil_1954 NC_011666.1 2128365 2129306 D KEGG: mgi:Mflv_5594 hypothetical protein; hypothetical protein 2128365..2129306 Methylocella silvestris BL2 7094072 YP_002362260.1 CDS Msil_1955 NC_011666.1 2129316 2129498 R hypothetical protein complement(2129316..2129498) Methylocella silvestris BL2 7094073 YP_002362261.1 CDS Msil_1956 NC_011666.1 2129805 2130512 D KEGG: rpb:RPB_3475 hypothetical protein; hypothetical protein 2129805..2130512 Methylocella silvestris BL2 7094074 YP_002362262.1 CDS Msil_1957 NC_011666.1 2130509 2131171 D hypothetical protein 2130509..2131171 Methylocella silvestris BL2 7094075 YP_002362263.1 CDS Msil_1958 NC_011666.1 2131171 2131656 D PFAM: GCN5-related N-acetyltransferase; KEGG: asa:ASA_4325 hypothetical protein; N-acetyltransferase GCN5 2131171..2131656 Methylocella silvestris BL2 7094076 YP_002362264.1 CDS Msil_1959 NC_011666.1 2131684 2132148 R KEGG: nha:Nham_0584 hypothetical protein; hypothetical protein complement(2131684..2132148) Methylocella silvestris BL2 7094077 YP_002362265.1 CDS Msil_1960 NC_011666.1 2132600 2133499 D PFAM: domain of unknown function DUF1738; KEGG: mes:Meso_3793 domain of unknown function DUF1738; hypothetical protein 2132600..2133499 Methylocella silvestris BL2 7094078 YP_002362266.1 CDS Msil_1961 NC_011666.1 2133557 2133865 D KEGG: xau:Xaut_0545 hypothetical protein; hypothetical protein 2133557..2133865 Methylocella silvestris BL2 7094079 YP_002362267.1 CDS Msil_1962 NC_011666.1 2134495 2135181 D hypothetical protein 2134495..2135181 Methylocella silvestris BL2 7094080 YP_002362268.1 CDS Msil_1963 NC_011666.1 2135191 2139111 D KEGG: bac:BamMC406_6773 haemolysin-type calcium binding domain protein; hypothetical protein 2135191..2139111 Methylocella silvestris BL2 7094081 YP_002362269.1 CDS Msil_1964 NC_011666.1 2139504 2139743 D KEGG: nha:Nham_0588 hypothetical protein; hypothetical protein 2139504..2139743 Methylocella silvestris BL2 7094082 YP_002362270.1 CDS Msil_1965 NC_011666.1 2139774 2139947 D hypothetical protein 2139774..2139947 Methylocella silvestris BL2 7094083 YP_002362271.1 CDS Msil_1966 NC_011666.1 2139944 2140303 D hypothetical protein 2139944..2140303 Methylocella silvestris BL2 7094084 YP_002362272.1 CDS Msil_1967 NC_011666.1 2140634 2140933 R KEGG: nha:Nham_0590 hypothetical protein; hypothetical protein complement(2140634..2140933) Methylocella silvestris BL2 7094085 YP_002362273.1 CDS Msil_1968 NC_011666.1 2140968 2141561 R KEGG: nha:Nham_0591 hypothetical protein; hypothetical protein complement(2140968..2141561) Methylocella silvestris BL2 7094086 YP_002362274.1 CDS Msil_1969 NC_011666.1 2141561 2142337 R PFAM: heat shock protein DnaJ domain protein; KEGG: nha:Nham_0592 hypothetical protein; heat shock protein DnaJ domain-containing protein complement(2141561..2142337) Methylocella silvestris BL2 7094087 YP_002362275.1 CDS Msil_1970 NC_011666.1 2142347 2144089 R PFAM: TRAG family protein; KEGG: nha:Nham_0593 TraG protein; TRAG family protein complement(2142347..2144089) Methylocella silvestris BL2 7094088 YP_002362276.1 CDS Msil_1971 NC_011666.1 2144146 2144964 D hypothetical protein 2144146..2144964 Methylocella silvestris BL2 7094089 YP_002362277.1 CDS Msil_1972 NC_011666.1 2144964 2145311 D KEGG: nha:Nham_0594 hypothetical protein; hypothetical protein 2144964..2145311 Methylocella silvestris BL2 7094090 YP_002362278.1 CDS Msil_1973 NC_011666.1 2145634 2145987 D KEGG: nha:Nham_0595 hypothetical protein; hypothetical protein 2145634..2145987 Methylocella silvestris BL2 7094091 YP_002362279.1 CDS Msil_1974 NC_011666.1 2145984 2147426 D PFAM: Relaxase/mobilization nuclease family protein; KEGG: nha:Nham_0596 hypothetical protein; Relaxase/mobilization nuclease family protein 2145984..2147426 Methylocella silvestris BL2 7091175 YP_002362280.1 CDS Msil_1975 NC_011666.1 2147553 2148404 D KEGG: mes:Meso_4610 hypothetical protein; hypothetical protein 2147553..2148404 Methylocella silvestris BL2 7094173 YP_002362281.1 CDS Msil_1976 NC_011666.1 2148391 2149314 D PFAM: Domain of unknown function DUF1814; KEGG: mes:Meso_4611 hypothetical protein; hypothetical protein 2148391..2149314 Methylocella silvestris BL2 7094174 YP_002362282.1 CDS Msil_1977 NC_011666.1 2149432 2150091 D KEGG: dac:Daci_2303 hypothetical protein; hypothetical protein 2149432..2150091 Methylocella silvestris BL2 7094175 YP_002362283.1 CDS Msil_1978 NC_011666.1 2150290 2151177 R PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: mlo:mll2153 dyhydroflavanol-4-reductase; NAD-dependent epimerase/dehydratase complement(2150290..2151177) Methylocella silvestris BL2 7094176 YP_002362284.1 CDS Msil_1979 NC_011666.1 2151279 2152112 D SMART: helix-turn-helix domain protein; KEGG: mlo:mlr2155 DNA-binding protein; XRE family transcriptional regulator 2151279..2152112 Methylocella silvestris BL2 7094177 YP_002362285.1 CDS Msil_1980 NC_011666.1 2152537 2153157 R PFAM: regulatory protein TetR; KEGG: bja:blr1086 transcriptional regulatory protein; TetR family transcriptional regulator complement(2152537..2153157) Methylocella silvestris BL2 7094178 YP_002362286.1 CDS Msil_1981 NC_011666.1 2153270 2153704 D KEGG: atc:AGR_L_31 hypothetical protein; hypothetical protein 2153270..2153704 Methylocella silvestris BL2 7094179 YP_002362287.1 CDS Msil_1982 NC_011666.1 2154054 2154395 D KEGG: met:M446_5602 PRC-barrel domain protein; hypothetical protein 2154054..2154395 Methylocella silvestris BL2 7094180 YP_002362288.1 CDS Msil_1983 NC_011666.1 2154515 2154706 D KEGG: nha:Nham_4354 transposase IS3/IS911; hypothetical protein 2154515..2154706 Methylocella silvestris BL2 7094181 YP_002362289.1 CDS Msil_1984 NC_011666.1 2155045 2156028 R KEGG: mag:amb4148 alpha/beta hydrolase; alpha/beta hydrolase complement(2155045..2156028) Methylocella silvestris BL2 7094182 YP_002362290.1 CDS Msil_1985 NC_011666.1 2156079 2156699 D PFAM: regulatory protein TetR; KEGG: rle:pRL120070 TetR family transcriptional regulator; TetR family transcriptional regulator 2156079..2156699 Methylocella silvestris BL2 7094183 YP_002362291.1 CDS Msil_1987 NC_011666.1 2157341 2157985 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: bid:Bind_1144 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase zinc-binding domain-containing protein 2157341..2157985 Methylocella silvestris BL2 7094185 YP_002362292.1 CDS Msil_1988 NC_011666.1 2158078 2159268 R KEGG: rfr:Rfer_2442 hypothetical protein; hypothetical protein complement(2158078..2159268) Methylocella silvestris BL2 7094186 YP_002362293.1 CDS Msil_1989 NC_011666.1 2159833 2160339 R PFAM: protein of unknown function DUF1543; KEGG: ftm:FTM_1408 hypothetical protein; hypothetical protein complement(2159833..2160339) Methylocella silvestris BL2 7094187 YP_002362294.1 CDS Msil_1990 NC_011666.1 2160579 2161964 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: azc:AZC_0074 putative transcriptional regulator; GntR family transcriptional regulator complement(2160579..2161964) Methylocella silvestris BL2 7094188 YP_002362295.1 CDS Msil_1991 NC_011666.1 2162342 2162824 D KEGG: azc:AZC_0073 hypothetical protein; hypothetical protein 2162342..2162824 Methylocella silvestris BL2 7094189 YP_002362296.1 CDS Msil_1992 NC_011666.1 2162857 2163885 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: azc:AZC_0072 putative amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2162857..2163885 Methylocella silvestris BL2 7094190 YP_002362297.1 CDS Msil_1993 NC_011666.1 2163860 2164972 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rle:RL0659 hypothetical protein; radical SAM protein 2163860..2164972 Methylocella silvestris BL2 7094191 YP_002362298.1 CDS Msil_1994 NC_011666.1 2164969 2165508 D PFAM: GCN5-related N-acetyltransferase; KEGG: azc:AZC_0070 putative histone acetyltransferase; N-acetyltransferase GCN5 2164969..2165508 Methylocella silvestris BL2 7094192 YP_002362299.1 CDS Msil_1995 NC_011666.1 2165505 2166476 D PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: azc:AZC_0069 putative selenophosphate synthetase-related protein; AIR synthase-like protein 2165505..2166476 Methylocella silvestris BL2 7094193 YP_002362300.1 CDS Msil_1996 NC_011666.1 2166473 2167618 D PFAM: glycosyl transferase group 1; KEGG: azc:AZC_0068 glycosyltransferase; group 1 glycosyl transferase 2166473..2167618 Methylocella silvestris BL2 7094194 YP_002362301.1 CDS Msil_1997 NC_011666.1 2167611 2167898 D KEGG: amr:AM1_2238 hypothetical protein; hypothetical protein 2167611..2167898 Methylocella silvestris BL2 7094195 YP_002362302.1 CDS Msil_1998 NC_011666.1 2167895 2169199 D KEGG: azc:AZC_0066 putative flavoprotein involved in K+ transport; putative potassium transport flavoprotein 2167895..2169199 Methylocella silvestris BL2 7094196 YP_002362303.1 CDS Msil_1999 NC_011666.1 2169196 2170065 D KEGG: azc:AZC_0065 hypothetical protein; hypothetical protein 2169196..2170065 Methylocella silvestris BL2 7094197 YP_002362304.1 CDS Msil_2000 NC_011666.1 2170217 2171473 R KEGG: bid:Bind_0983 hypothetical protein; hypothetical protein complement(2170217..2171473) Methylocella silvestris BL2 7094198 YP_002362305.1 CDS Msil_2001 NC_011666.1 2171843 2175208 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bja:bll0966 two-component hybrid sensor and regulator; integral membrane sensor hybrid histidine kinase 2171843..2175208 Methylocella silvestris BL2 7094199 YP_002362306.1 CDS Msil_2002 NC_011666.1 2175201 2176121 D PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bid:Bind_0974 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 2175201..2176121 Methylocella silvestris BL2 7094200 YP_002362307.1 CDS Msil_2003 NC_011666.1 2176137 2176850 R KEGG: dra:DR_A0324 UreA/short-chain amide ABC transporter, ATP-binding protein, putative; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtE complement(2176137..2176850) Methylocella silvestris BL2 7094201 YP_002362308.1 CDS Msil_2004 NC_011666.1 2176847 2177623 R TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: dra:DR_A0323 UreA/short-chain amide ABC transporter, ATP-binding protein, putative; urea ABC transporter ATP-binding protein UrtD complement(2176847..2177623) Methylocella silvestris BL2 7094202 YP_002362309.1 CDS Msil_2005 NC_011666.1 2177627 2178712 R TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: dra:DR_A0322 UreA/short chain-amide ABC transporter, permease protein; urea ABC transporter, permease protein UrtC complement(2177627..2178712) Methylocella silvestris BL2 7094203 YP_002362310.1 CDS Msil_2006 NC_011666.1 2178742 2179647 R PFAM: inner-membrane translocator; KEGG: dra:DR_A0321 UreA/short-chain amide ABC transporter, permease protein; inner-membrane translocator complement(2178742..2179647) Methylocella silvestris BL2 7094204 YP_002362311.1 CDS Msil_2007 NC_011666.1 2179706 2180923 R TIGRFAM: urea ABC transporter, urea binding protein; PFAM: Extracellular ligand-binding receptor; KEGG: dra:DR_A0320 UreA/short-chain amide ABC transporter, periplasmic UreA/short-chain amide-binding protein; urea ABC transporter, urea binding protein complement(2179706..2180923) Methylocella silvestris BL2 7094205 YP_002362312.1 CDS Msil_2008 NC_011666.1 2181052 2181672 R TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: gbe:GbCGDNIH1_2167 urease accessory protein UreG; urease accessory protein UreG complement(2181052..2181672) Methylocella silvestris BL2 7094206 YP_002362313.1 CDS Msil_2009 NC_011666.1 2181669 2182364 R PFAM: Urease accessory protein UreF; KEGG: gbe:GbCGDNIH1_2166 urease accessory protein UreF; Urease accessory protein UreF complement(2181669..2182364) Methylocella silvestris BL2 7094207 YP_002362314.1 CDS Msil_2010 NC_011666.1 2182342 2182860 R PFAM: UreE urease accessory domain protein; KEGG: mgm:Mmc1_1028 UreE urease accessory domain protein; UreE urease accessory domain-containing protein complement(2182342..2182860) Methylocella silvestris BL2 7094208 YP_002362315.1 CDS ureC NC_011666.1 2182862 2184574 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(2182862..2184574) Methylocella silvestris BL2 7094209 YP_002362316.1 CDS Msil_2012 NC_011666.1 2184578 2184892 R KEGG: rpc:RPC_3695 urease subunit beta; TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit; urease subunit beta complement(2184578..2184892) Methylocella silvestris BL2 7094210 YP_002362317.1 CDS Msil_2013 NC_011666.1 2184889 2185191 R KEGG: rle:RL3735 urease subunit gamma; TIGRFAM: urease, gamma subunit; PFAM: Urease gamma subunit region; urease subunit gamma complement(2184889..2185191) Methylocella silvestris BL2 7094211 YP_002362318.1 CDS Msil_2014 NC_011666.1 2185188 2186036 R PFAM: Urease accessory protein UreD; KEGG: met:M446_2214 urease accessory protein UreD; Urease accessory protein UreD complement(2185188..2186036) Methylocella silvestris BL2 7094212 YP_002362319.1 CDS Msil_2016 NC_011666.1 2187816 2188094 R PFAM: transposase IS3/IS911 family protein; KEGG: mpo:Mpop_3816 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(2187816..2188094) Methylocella silvestris BL2 7094214 YP_002362320.1 CDS Msil_2018 NC_011666.1 2189454 2189744 R hypothetical protein complement(2189454..2189744) Methylocella silvestris BL2 7094216 YP_002362321.1 CDS Msil_2019 NC_011666.1 2189983 2190654 R PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rpb:RPB_4035 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(2189983..2190654) Methylocella silvestris BL2 7094217 YP_002362322.1 CDS Msil_2020 NC_011666.1 2190654 2192969 R PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; Phytochrome central region domain protein; PAS fold-2 domain protein; KEGG: rpd:RPD_3788 phytochrome; multi-sensor signal transduction histidine kinase complement(2190654..2192969) Methylocella silvestris BL2 7094218 YP_002362323.1 CDS Msil_2021 NC_011666.1 2192962 2193603 R PFAM: Haem oxygenase-like; KEGG: pfl:PFL_5199 heme oxygenase BphO; heme oxygenase-like protein complement(2192962..2193603) Methylocella silvestris BL2 7094219 YP_002362324.1 CDS Msil_2022 NC_011666.1 2193760 2194266 R hypothetical protein complement(2193760..2194266) Methylocella silvestris BL2 7094220 YP_002362325.1 CDS Msil_2023 NC_011666.1 2194499 2195752 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: azc:AZC_2438 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase complement(2194499..2195752) Methylocella silvestris BL2 7094221 YP_002362326.1 CDS Msil_2024 NC_011666.1 2195749 2196546 R PFAM: protein of unknown function DUF1365; KEGG: mlo:mll8086 hypothetical protein; hypothetical protein complement(2195749..2196546) Methylocella silvestris BL2 7094222 YP_002362327.1 CDS Msil_2025 NC_011666.1 2196543 2197886 R PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cak:Caul_1555 amine oxidase; amine oxidase complement(2196543..2197886) Methylocella silvestris BL2 7094223 YP_002362328.1 CDS Msil_2026 NC_011666.1 2198034 2198870 D KEGG: psb:Psyr_4383 esterase/lipase/thioesterase family protein; esterase/lipase/thioesterase family protein 2198034..2198870 Methylocella silvestris BL2 7094224 YP_002362329.1 CDS Msil_2027 NC_011666.1 2198867 2199676 D PFAM: protein of unknown function DUF1295; KEGG: swi:Swit_4841 protein of unknown function DUF1295; hypothetical protein 2198867..2199676 Methylocella silvestris BL2 7094225 YP_002362330.1 CDS Msil_2028 NC_011666.1 2199673 2200074 R KEGG: azc:AZC_2433 hypothetical protein; hypothetical protein complement(2199673..2200074) Methylocella silvestris BL2 7094226 YP_002362331.1 CDS Msil_2029 NC_011666.1 2200206 2201696 D TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: vha:VIBHAR_02162 phytoene dehydrogenase; phytoene desaturase 2200206..2201696 Methylocella silvestris BL2 7094227 YP_002362332.1 CDS Msil_2030 NC_011666.1 2201709 2202935 R catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase complement(2201709..2202935) Methylocella silvestris BL2 7094228 YP_002362333.1 CDS Msil_2031 NC_011666.1 2203232 2204077 R TIGRFAM: photosynthetic complex assembly protein 2; KEGG: rru:Rru_A0614 hypothetical protein; photosynthetic complex assembly protein 2 complement(2203232..2204077) Methylocella silvestris BL2 7094229 YP_002362334.1 CDS Msil_2032 NC_011666.1 2204091 2205152 R oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis; magnesium-protoporphyrin IX monomethyl ester cyclase complement(2204091..2205152) Methylocella silvestris BL2 7094230 YP_002362335.1 CDS Msil_2033 NC_011666.1 2205149 2205454 R KEGG: rpt:Rpal_1739 hypothetical protein; hypothetical protein complement(2205149..2205454) Methylocella silvestris BL2 7094231 YP_002362336.1 CDS Msil_2034 NC_011666.1 2205451 2205924 R TIGRFAM: photosynthetic complex assembly protein; KEGG: rpc:RPC_1321 putative photosynthetic complex assembly protein; photosynthetic complex assembly protein complement(2205451..2205924) Methylocella silvestris BL2 7094232 YP_002362337.1 CDS Msil_2035 NC_011666.1 2205921 2206619 R KEGG: rru:Rru_A0616 photosynthetic complex assembly protein; photosynthetic complex assembly protein complement(2205921..2206619) Methylocella silvestris BL2 7094233 YP_002362338.1 CDS Msil_2036 NC_011666.1 2206616 2207377 R TIGRFAM: photosynthetic reaction center H subunit; PFAM: PRC-barrel domain protein; Photosynthetic reaction centre H subunit; KEGG: bbt:BBta_6411 reaction center protein H chain (photosynthetic reaction center H subunit); photosynthetic reaction center H subunit complement(2206616..2207377) Methylocella silvestris BL2 7094234 YP_002362339.1 CDS Msil_2037 NC_011666.1 2207402 2208832 R PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: mex:Mext_4811 PucC protein; PUCC protein complement(2207402..2208832) Methylocella silvestris BL2 7094235 YP_002362340.1 CDS Msil_2038 NC_011666.1 2208829 2209530 R catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine; Mg-protoporphyrin IX methyl transferase complement(2208829..2209530) Methylocella silvestris BL2 7094236 YP_002362341.1 CDS chlL NC_011666.1 2209530 2210438 R light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production; protochlorophyllide reductase iron-sulfur ATP-binding protein complement(2209530..2210438) Methylocella silvestris BL2 7094237 YP_002362342.1 CDS bchH NC_011666.1 2210435 2214184 R involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; the enzyme from Rhodobacter capsulatus contains an Fe-S cluster; part of a complex with BchI, BchD, and BchH; magnesium chelatase subunit H complement(2210435..2214184) Methylocella silvestris BL2 7094238 YP_002362343.1 CDS Msil_2041 NC_011666.1 2214156 2215682 R light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit B complement(2214156..2215682) Methylocella silvestris BL2 7094239 YP_002362344.1 CDS Msil_2042 NC_011666.1 2215686 2216966 R light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit N complement(2215686..2216966) Methylocella silvestris BL2 7094240 YP_002362345.1 CDS Msil_2043 NC_011666.1 2216963 2217496 R PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: mpo:Mpop_5362 2-vinyl bacteriochlorophyllide hydratase; 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD complement(2216963..2217496) Methylocella silvestris BL2 7094241 YP_002362346.1 CDS Msil_2044 NC_011666.1 2217814 2218782 D PFAM: cobalamin B12-binding domain protein; KEGG: met:M446_3716 cobalamin B12-binding domain protein; cobalamin B12-binding domain-containing protein 2217814..2218782 Methylocella silvestris BL2 7094242 YP_002362347.1 CDS Msil_2045 NC_011666.1 2218813 2220255 D KEGG: met:M446_3715 transcriptional regulator, fis family; TIGRFAM: transcriptional regulator PpsR; PFAM: helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; Fis family transcriptional regulator PpsR 2218813..2220255 Methylocella silvestris BL2 7094243 YP_002362348.1 CDS Msil_2046 NC_011666.1 2220298 2220459 D hypothetical protein 2220298..2220459 Methylocella silvestris BL2 7094244 YP_002362349.1 CDS Msil_2047 NC_011666.1 2220441 2221292 R PFAM: hydroxyneurosporene synthase; KEGG: rpc:RPC_1288 hydroxyneurosporene synthase; hydroxyneurosporene synthase complement(2220441..2221292) Methylocella silvestris BL2 7094245 YP_002362350.1 CDS Msil_2048 NC_011666.1 2221328 2222875 R TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rpc:RPC_1289 FAD dependent oxidoreductase; phytoene desaturase complement(2221328..2222875) Methylocella silvestris BL2 7094246 YP_002362351.1 CDS Msil_2049 NC_011666.1 2222992 2223861 D PFAM: Polyprenyl synthetase; KEGG: mpo:Mpop_2849 polyprenyl synthetase; polyprenyl synthetase 2222992..2223861 Methylocella silvestris BL2 7094247 YP_002362352.1 CDS Msil_2050 NC_011666.1 2223954 2225087 D PFAM: O-methyltransferase family 2; Methyltransferase type 12; KEGG: rpe:RPE_1325 O-methyltransferase, family 2; O-methyltransferase family 2 2223954..2225087 Methylocella silvestris BL2 7094248 YP_002362353.1 CDS Msil_2051 NC_011666.1 2225177 2226124 D TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: rru:Rru_A2981 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide; chlorophyll synthesis pathway protein BchC 2225177..2226124 Methylocella silvestris BL2 7094249 YP_002362354.1 CDS Msil_2052 NC_011666.1 2226184 2227173 D KEGG: rpe:RPE_1327 chlorophyllide reductase iron protein subunit X; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein; chlorophyllide reductase iron protein subunit X 2226184..2227173 Methylocella silvestris BL2 7094250 YP_002362355.1 CDS Msil_2053 NC_011666.1 2227219 2228760 D TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase component 1; KEGG: rpb:RPB_4000 chlorophyllide reductase subunit Y; chlorophyllide reductase subunit Y 2227219..2228760 Methylocella silvestris BL2 7094251 YP_002362356.1 CDS Msil_2054 NC_011666.1 2228760 2230217 D TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1; protein of unknown function DUF1197; KEGG: rpe:RPE_1329 chlorophyllide reductase subunit Z; chlorophyllide reductase subunit Z 2228760..2230217 Methylocella silvestris BL2 7094252 YP_002362357.1 CDS Msil_2055 NC_011666.1 2230290 2230523 D hypothetical protein 2230290..2230523 Methylocella silvestris BL2 7094253 YP_002362358.1 CDS Msil_2056 NC_011666.1 2230623 2230853 D PFAM: antenna complex alpha/beta subunit; KEGG: met:M446_3701 antenna complex alpha/beta subunit; antenna complex alpha/beta subunit 2230623..2230853 Methylocella silvestris BL2 7091750 YP_002362359.1 CDS Msil_2057 NC_011666.1 2230863 2231075 D PFAM: antenna complex alpha/beta subunit; KEGG: mex:Mext_2735 antenna complex alpha/beta subunit; antenna complex alpha/beta subunit 2230863..2231075 Methylocella silvestris BL2 7091422 YP_002362360.1 CDS Msil_2058 NC_011666.1 2231191 2232015 D TIGRFAM: photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; KEGG: met:M446_3703 photosynthetic reaction center L subunit; photosynthetic reaction center subunit L 2231191..2232015 Methylocella silvestris BL2 7091423 YP_002362361.1 CDS Msil_2059 NC_011666.1 2232142 2233107 D TIGRFAM: photosynthetic reaction center, M subunit; PFAM: photosynthetic reaction centre protein; KEGG: mpo:Mpop_2859 photosynthetic reaction center, M subunit; photosynthetic reaction center subunit M 2232142..2233107 Methylocella silvestris BL2 7091424 YP_002362362.1 CDS Msil_2060 NC_011666.1 2233116 2234132 D PFAM: photosynthetic reaction centre cytochrome c subunit; KEGG: met:M446_3705 photosynthetic reaction centre cytochrome c subunit; photosynthetic reaction centre cytochrome c subunit 2233116..2234132 Methylocella silvestris BL2 7091425 YP_002362363.1 CDS Msil_2061 NC_011666.1 2234232 2235161 D TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: bbt:BBta_6422 bacteriochlorophyll/chlorophyll a synthase; bacteriochlorophyll/chlorophyll a synthase 2234232..2235161 Methylocella silvestris BL2 7091426 YP_002362364.1 CDS Msil_2062 NC_011666.1 2235161 2236528 D PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rpt:Rpal_1720 PucC protein; PUCC protein 2235161..2236528 Methylocella silvestris BL2 7091427 YP_002362365.1 CDS Msil_2063 NC_011666.1 2236534 2237733 D TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bra:BRADO1632 geranylgeranyl reductase; geranylgeranyl reductase 2236534..2237733 Methylocella silvestris BL2 7091428 YP_002362366.1 CDS Msil_2064 NC_011666.1 2237766 2238287 D PFAM: TspO/MBR family protein; KEGG: rpc:RPC_1305 TspO and MBR like proteins; TspO and MBR-like protein 2237766..2238287 Methylocella silvestris BL2 7091429 YP_002362367.1 CDS Msil_2065 NC_011666.1 2238305 2239459 R TIGRFAM: magnesium chelatase accessory protein; PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_6446 putative alpha/beta hydrolase, putative protoporphyrin IX magnesium chelatase BchO-like protein; magnesium chelatase accessory protein complement(2238305..2239459) Methylocella silvestris BL2 7091430 YP_002362368.1 CDS Msil_2066 NC_011666.1 2239543 2241063 D KEGG: rpc:RPC_1247 dienelactone hydrolase; dienelactone hydrolase 2239543..2241063 Methylocella silvestris BL2 7091431 YP_002362369.1 CDS bchD NC_011666.1 2241053 2242816 R involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; part of a complex with BchI, BchD, and BchH; magnesium chelatase subunit D complement(2241053..2242816) Methylocella silvestris BL2 7091432 YP_002362370.1 CDS Msil_2068 NC_011666.1 2242813 2243838 R KEGG: rpe:RPE_1306 magnesium chelatase ATPase subunit I; TIGRFAM: magnesium chelatase ATPase subunit I; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; magnesium chelatase ATPase subunit I complement(2242813..2243838) Methylocella silvestris BL2 7091433 YP_002362371.1 CDS Msil_2069 NC_011666.1 2243968 2245035 D PFAM: Squalene/phytoene synthase; KEGG: bra:BRADO6506 phytoene synthase; squalene/phytoene synthase 2243968..2245035 Methylocella silvestris BL2 7091434 YP_002362372.1 CDS Msil_2070 NC_011666.1 2245309 2245692 D KEGG: nha:Nham_0798 hypothetical protein; hypothetical protein 2245309..2245692 Methylocella silvestris BL2 7091435 YP_002362373.1 CDS Msil_2071 NC_011666.1 2245692 2246168 D KEGG: mgm:Mmc1_2925 hypothetical protein; hypothetical protein 2245692..2246168 Methylocella silvestris BL2 7091436 YP_002362374.1 CDS Msil_2073 NC_011666.1 2248562 2249059 R KEGG: mrd:Mrad2831_2438 hypothetical protein; hypothetical protein complement(2248562..2249059) Methylocella silvestris BL2 7091439 YP_002362375.1 CDS Msil_2074 NC_011666.1 2249102 2250409 R catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase complement(2249102..2250409) Methylocella silvestris BL2 7091440 YP_002362376.1 CDS Msil_2075 NC_011666.1 2250646 2250933 D hypothetical protein 2250646..2250933 Methylocella silvestris BL2 7091441 YP_002362377.1 CDS Msil_2076 NC_011666.1 2250989 2251822 D TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: bid:Bind_2897 methionine aminopeptidase, type I; methionine aminopeptidase 2250989..2251822 Methylocella silvestris BL2 7091442 YP_002362378.1 CDS Msil_2077 NC_011666.1 2251819 2252535 D PFAM: DNA repair protein RadC; KEGG: bid:Bind_2898 DNA repair protein RadC; DNA repair protein RadC 2251819..2252535 Methylocella silvestris BL2 7091443 YP_002362379.1 CDS Msil_2078 NC_011666.1 2252566 2252862 R PFAM: Usg family protein; KEGG: xau:Xaut_4266 Usg family protein; Usg family protein complement(2252566..2252862) Methylocella silvestris BL2 7091444 YP_002362380.1 CDS Msil_2079 NC_011666.1 2253237 2254319 D PFAM: alpha/beta hydrolase fold; KEGG: bid:Bind_2904 3-oxoadipate enol-lactonase; alpha/beta hydrolase fold protein 2253237..2254319 Methylocella silvestris BL2 7091445 YP_002362381.1 CDS Msil_2080 NC_011666.1 2254364 2254891 R PFAM: flavin reductase domain protein FMN-binding; KEGG: mex:Mext_3021 flavin reductase domain protein FMN-binding; flavin reductase domain-containing protein complement(2254364..2254891) Methylocella silvestris BL2 7091446 YP_002362382.1 CDS Msil_2081 NC_011666.1 2255144 2256061 D PFAM: inner-membrane translocator; KEGG: mrd:Mrad2831_2249 inner-membrane translocator; inner-membrane translocator 2255144..2256061 Methylocella silvestris BL2 7091447 YP_002362383.1 CDS Msil_2082 NC_011666.1 2256068 2257438 D PFAM: inner-membrane translocator; KEGG: mrd:Mrad2831_2250 inner-membrane translocator; inner-membrane translocator 2256068..2257438 Methylocella silvestris BL2 7091448 YP_002362384.1 CDS Msil_2083 NC_011666.1 2257438 2258358 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_2944 ABC-type uncharacterized transport ATPase component; ABC transporter-like protein 2257438..2258358 Methylocella silvestris BL2 7091449 YP_002362385.1 CDS Msil_2084 NC_011666.1 2258367 2259104 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_5433 ABC transporter related; ABC transporter-like protein 2258367..2259104 Methylocella silvestris BL2 7091450 YP_002362386.1 CDS Msil_2085 NC_011666.1 2259104 2259427 D KEGG: mrd:Mrad2831_2253 hypothetical protein; hypothetical protein 2259104..2259427 Methylocella silvestris BL2 7091451 YP_002362387.1 CDS Msil_2086 NC_011666.1 2259447 2260565 D PFAM: Extracellular ligand-binding receptor; KEGG: xau:Xaut_3905 extracellular ligand-binding receptor; extracellular ligand-binding receptor 2259447..2260565 Methylocella silvestris BL2 7091452 YP_002362388.1 CDS Msil_2087 NC_011666.1 2260571 2261299 R PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: bid:Bind_2222 cytochrome c biogenesis protein transmembrane region; cytochrome c biogenesis protein transmembrane subunit complement(2260571..2261299) Methylocella silvestris BL2 7091453 YP_002362389.1 CDS Msil_2088 NC_011666.1 2261614 2263053 D KEGG: bid:Bind_2076 membrane protein involved in the export of O-antigen and teichoic acid-like protein; membrane protein 2261614..2263053 Methylocella silvestris BL2 7091454 YP_002362390.1 CDS Msil_2089 NC_011666.1 2263056 2263976 R PFAM: methyltransferase small; ribosomal L11 methyltransferase; KEGG: bid:Bind_0776 ribosomal L11 methyltransferase; ribosomal L11 methyltransferase complement(2263056..2263976) Methylocella silvestris BL2 7091455 YP_002362391.1 CDS Msil_2090 NC_011666.1 2264271 2264426 D hypothetical protein 2264271..2264426 Methylocella silvestris BL2 7091456 YP_002362392.1 CDS Msil_2091 NC_011666.1 2264673 2265671 D PFAM: Catalase domain protein; KEGG: bbt:BBta_6719 catalase, protein SrpA precursor; Catalase domain-containing protein 2264673..2265671 Methylocella silvestris BL2 7091457 YP_002362393.1 CDS Msil_2092 NC_011666.1 2265844 2266332 R PFAM: thioesterase superfamily protein; KEGG: rpi:Rpic_3908 thioesterase superfamily protein; thioesterase superfamily protein complement(2265844..2266332) Methylocella silvestris BL2 7091458 YP_002362394.1 CDS Msil_2093 NC_011666.1 2266688 2267890 D PFAM: integrase family protein; KEGG: met:M446_6722 integrase family protein; integrase family protein 2266688..2267890 Methylocella silvestris BL2 7091459 YP_002362395.1 CDS Msil_2094 NC_011666.1 2268726 2269376 D hypothetical protein 2268726..2269376 Methylocella silvestris BL2 7091460 YP_002362396.1 CDS Msil_2095 NC_011666.1 2270688 2271299 D PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: mrd:Mrad2831_6388 resolvase domain protein; resolvase domain-containing protein 2270688..2271299 Methylocella silvestris BL2 7091461 YP_002362397.1 CDS Msil_2096 NC_011666.1 2271610 2272707 R hypothetical protein complement(2271610..2272707) Methylocella silvestris BL2 7091462 YP_002362398.1 CDS Msil_2097 NC_011666.1 2272704 2274029 R KEGG: bra:BRADO3526 hypothetical protein; hypothetical protein complement(2272704..2274029) Methylocella silvestris BL2 7091463 YP_002362399.1 CDS Msil_2098 NC_011666.1 2274037 2274510 R hypothetical protein complement(2274037..2274510) Methylocella silvestris BL2 7091464 YP_002362400.1 CDS Msil_2099 NC_011666.1 2275325 2275978 R KEGG: met:M446_2820 hypothetical protein; hypothetical protein complement(2275325..2275978) Methylocella silvestris BL2 7091465 YP_002362401.1 CDS Msil_2100 NC_011666.1 2276259 2276906 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bid:Bind_1313 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase 2276259..2276906 Methylocella silvestris BL2 7091466 YP_002362402.1 CDS Msil_2101 NC_011666.1 2276903 2277778 D PFAM: ATP12 ATPase; KEGG: bid:Bind_1314 ATP12 ATPase; ATP12 ATPase 2276903..2277778 Methylocella silvestris BL2 7091467 YP_002362403.1 CDS Msil_2102 NC_011666.1 2277775 2278137 D KEGG: mlo:mll3327 hypothetical protein; hypothetical protein 2277775..2278137 Methylocella silvestris BL2 7091468 YP_002362404.1 CDS Msil_2103 NC_011666.1 2278201 2278698 D PFAM: protein of unknown function DUF461; KEGG: mlo:mll3326 hypothetical protein; hypothetical protein 2278201..2278698 Methylocella silvestris BL2 7091469 YP_002362405.1 CDS Msil_2104 NC_011666.1 2278877 2279161 D KEGG: bid:Bind_2379 hypothetical protein; hypothetical protein 2278877..2279161 Methylocella silvestris BL2 7091470 YP_002362406.1 CDS Msil_2105 NC_011666.1 2280268 2280549 D PFAM: plasmid maintenance system killer; KEGG: rpc:RPC_3186 plasmid maintenance system killer; plasmid maintenance system killer protein 2280268..2280549 Methylocella silvestris BL2 7091471 YP_002362407.1 CDS Msil_2106 NC_011666.1 2280558 2280839 D TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: rpc:RPC_3187 plasmid maintenance system antidote protein, XRE family; XRE family transcriptional regulator 2280558..2280839 Methylocella silvestris BL2 7091472 YP_002362408.1 CDS Msil_2107 NC_011666.1 2280973 2281596 R TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: bid:Bind_1227 riboflavin synthase, alpha subunit; riboflavin synthase subunit alpha complement(2280973..2281596) Methylocella silvestris BL2 7091473 YP_002362409.1 CDS Msil_2108 NC_011666.1 2281600 2282712 R TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: bid:Bind_1226 riboflavin biosynthesis protein RibD; riboflavin biosynthesis protein RibD complement(2281600..2282712) Methylocella silvestris BL2 7091474 YP_002362410.1 CDS Msil_2109 NC_011666.1 2282709 2283239 R PFAM: ATP-cone domain protein; KEGG: met:M446_3103 ATP-cone domain protein; ATP-cone domain-containing protein complement(2282709..2283239) Methylocella silvestris BL2 7091475 YP_002362411.1 CDS glyA NC_011666.1 2283250 2284554 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(2283250..2284554) Methylocella silvestris BL2 7091476 YP_002362412.1 CDS Msil_2111 NC_011666.1 2284911 2285933 D KEGG: bxe:Bxe_A2373 hypothetical protein; hypothetical protein 2284911..2285933 Methylocella silvestris BL2 7091477 YP_002362413.1 CDS Msil_2112 NC_011666.1 2286120 2287463 R PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: bid:Bind_0884 peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein complement(2286120..2287463) Methylocella silvestris BL2 7091478 YP_002362414.1 CDS Msil_2113 NC_011666.1 2288095 2288607 R PFAM: regulatory protein MarR; KEGG: bid:Bind_0883 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(2288095..2288607) Methylocella silvestris BL2 7091479 YP_002362415.1 CDS Msil_2114 NC_011666.1 2289215 2289967 R converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase complement(2289215..2289967) Methylocella silvestris BL2 7091480 YP_002362416.1 CDS Msil_2115 NC_011666.1 2290262 2291263 R TIGRFAM: methyltransferase FkbM family; KEGG: bte:BTH_II1399 methyltransferase, FkbM family domain protein; FkbM family methyltransferase complement(2290262..2291263) Methylocella silvestris BL2 7091481 YP_002362417.1 CDS Msil_2116 NC_011666.1 2291738 2292265 R PFAM: phosphoribosyltransferase; KEGG: rpe:RPE_2299 xanthine-guanine phosphoribosyltransferase; Xanthine phosphoribosyltransferase complement(2291738..2292265) Methylocella silvestris BL2 7091483 YP_002362418.1 CDS Msil_2117 NC_011666.1 2292262 2293041 R PFAM: molybdopterin binding domain; KEGG: bid:Bind_1130 molybdopterin binding domain; molybdopterin binding domain-containing protein complement(2292262..2293041) Methylocella silvestris BL2 7091484 YP_002362419.1 CDS Msil_2118 NC_011666.1 2293169 2293588 R PFAM: protein of unknown function UPF0047; KEGG: bmj:BMULJ_03296 hypothetical protein; hypothetical protein complement(2293169..2293588) Methylocella silvestris BL2 7091485 YP_002362420.1 CDS Msil_2119 NC_011666.1 2293588 2294256 R PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bid:Bind_1206 peptidase M15D VanX D-ala-D-ala dipeptidase; peptidase M15D vanX D-ala-D-ala dipeptidase complement(2293588..2294256) Methylocella silvestris BL2 7091486 YP_002362421.1 CDS Msil_2120 NC_011666.1 2294477 2294950 D PFAM: RDD domain containing protein; KEGG: bid:Bind_1205 RDD domain containing protein; RDD domain-containing protein 2294477..2294950 Methylocella silvestris BL2 7091487 YP_002362422.1 CDS Msil_2121 NC_011666.1 2295037 2295771 D Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 2295037..2295771 Methylocella silvestris BL2 7091488 YP_002362423.1 CDS Msil_2122 NC_011666.1 2295836 2296846 R KEGG: gsu:GSU3222 NHL repeat-containing protein; hypothetical protein complement(2295836..2296846) Methylocella silvestris BL2 7091489 YP_002362424.1 CDS Msil_2123 NC_011666.1 2296987 2297511 R KEGG: bja:bll6745 hypothetical protein; hypothetical protein complement(2296987..2297511) Methylocella silvestris BL2 7091490 YP_002362425.1 CDS Msil_2124 NC_011666.1 2297578 2299674 R PFAM: protein of unknown function RIO1; tyrosine protein kinase; protein of unknown function DUF323; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: met:M446_0913 serine/threonine protein kinase; serine/threonine protein kinase complement(2297578..2299674) Methylocella silvestris BL2 7091491 YP_002362426.1 CDS Msil_2125 NC_011666.1 2300076 2300672 D KEGG: amr:AM1_B0396 hypothetical protein; hypothetical protein 2300076..2300672 Methylocella silvestris BL2 7091492 YP_002362427.1 CDS Msil_2126 NC_011666.1 2300879 2301628 R KEGG: smd:Smed_1308 hypothetical protein; hypothetical protein complement(2300879..2301628) Methylocella silvestris BL2 7091493 YP_002362428.1 CDS Msil_2127 NC_011666.1 2301696 2303948 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(2301696..2303948) Methylocella silvestris BL2 7091494 YP_002362429.1 CDS Msil_2128 NC_011666.1 2304210 2304443 D KEGG: bid:Bind_1947 hypothetical protein; hypothetical protein 2304210..2304443 Methylocella silvestris BL2 7091495 YP_002362430.1 CDS Msil_2129 NC_011666.1 2304488 2305555 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: mrd:Mrad2831_1079 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(2304488..2305555) Methylocella silvestris BL2 7091496 YP_002362431.1 CDS Msil_2130 NC_011666.1 2305657 2306100 D PFAM: helix-turn-helix HxlR type; KEGG: gox:GOX0912 hypothetical protein; HxlR family transcriptional regulator 2305657..2306100 Methylocella silvestris BL2 7091497 YP_002362432.1 CDS Msil_2131 NC_011666.1 2306050 2307324 R TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: gdi:GDI1919 adenosylmethionine--8-amino-7-oxononanoate transaminase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(2306050..2307324) Methylocella silvestris BL2 7091498 YP_002362433.1 CDS Msil_2132 NC_011666.1 2307529 2308581 D KEGG: bid:Bind_0814 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; 8-amino-7-oxononanoate synthase 2307529..2308581 Methylocella silvestris BL2 7091499 YP_002362434.1 CDS Msil_2133 NC_011666.1 2308586 2309257 D TIGRFAM: dethiobiotin synthase; KEGG: bid:Bind_0813 dethiobiotin synthase; dethiobiotin synthase 2308586..2309257 Methylocella silvestris BL2 7091500 YP_002362435.1 CDS Msil_2134 NC_011666.1 2309315 2309875 R PFAM: regulatory protein TetR; KEGG: mex:Mext_3102 regulatory protein TetR; TetR family transcriptional regulator complement(2309315..2309875) Methylocella silvestris BL2 7091501 YP_002362436.1 CDS Msil_2135 NC_011666.1 2309882 2310355 R PFAM: protein of unknown function DUF1348; KEGG: smt:Smal_2002 protein of unknown function DUF1348; hypothetical protein complement(2309882..2310355) Methylocella silvestris BL2 7091502 YP_002362437.1 CDS Msil_2136 NC_011666.1 2310480 2311226 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sew:SeSA_A2400 inner membrane ABC transporter permease protein YehW; binding-protein-dependent transport system inner membrane protein complement(2310480..2311226) Methylocella silvestris BL2 7091914 YP_002362438.1 CDS Msil_2137 NC_011666.1 2311223 2312161 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cvi:CV_4394 ABC transporter ATP-binding protein; ABC transporter-like protein complement(2311223..2312161) Methylocella silvestris BL2 7093358 YP_002362439.1 CDS Msil_2138 NC_011666.1 2312158 2313327 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_2944 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2312158..2313327) Methylocella silvestris BL2 7093359 YP_002362440.1 CDS Msil_2139 NC_011666.1 2313324 2314244 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: csa:Csal_2943 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein complement(2313324..2314244) Methylocella silvestris BL2 7093360 YP_002362441.1 CDS Msil_2140 NC_011666.1 2314241 2315332 R KEGG: bid:Bind_3505 conserved hypothetical protein; putative deoxyribonuclease; hypothetical protein complement(2314241..2315332) Methylocella silvestris BL2 7093361 YP_002362442.1 CDS Msil_2141 NC_011666.1 2315480 2315983 D KEGG: scl:sce1235 hypothetical protein; hypothetical protein 2315480..2315983 Methylocella silvestris BL2 7093362 YP_002362443.1 CDS Msil_2142 NC_011666.1 2316104 2317096 R in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY complement(2316104..2317096) Methylocella silvestris BL2 7093363 YP_002362444.1 CDS Msil_2143 NC_011666.1 2317243 2317569 D KEGG: cak:Caul_0681 activator of HSP90 ATPase 1 family protein; hypothetical protein 2317243..2317569 Methylocella silvestris BL2 7093364 YP_002362445.1 CDS Msil_2144 NC_011666.1 2317835 2319163 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: nmu:Nmul_A0934 RNA-directed DNA polymerase (reverse transcriptase); RNA-directed DNA polymerase complement(2317835..2319163) Methylocella silvestris BL2 7093365 YP_002362446.1 CDS Msil_2145 NC_011666.1 2320111 2320998 D Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate; 5'-methylthioadenosine phosphorylase 2320111..2320998 Methylocella silvestris BL2 7093366 YP_002362447.1 CDS Msil_2146 NC_011666.1 2320998 2321558 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 2320998..2321558 Methylocella silvestris BL2 7093367 YP_002362448.1 CDS Msil_2147 NC_011666.1 2321620 2321895 D hypothetical protein 2321620..2321895 Methylocella silvestris BL2 7093368 YP_002362449.1 CDS Msil_2148 NC_011666.1 2321892 2322149 D hypothetical protein 2321892..2322149 Methylocella silvestris BL2 7093369 YP_002362450.1 CDS Msil_2149 NC_011666.1 2322439 2323584 D PFAM: alpha/beta hydrolase fold; PHB de-polymerase domain protein; KEGG: bvi:Bcep1808_7272 PHB de-polymerase domain-containing protein; PHB de-polymerase domain-containing protein 2322439..2323584 Methylocella silvestris BL2 7093370 YP_002362451.1 CDS Msil_2151 NC_011666.1 2324111 2324824 D KEGG: bid:Bind_0778 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH 2324111..2324824 Methylocella silvestris BL2 7093372 YP_002362452.1 CDS Msil_2152 NC_011666.1 2324824 2325453 D PFAM: Ham1 family protein; KEGG: bid:Bind_0779 Ham1 family protein; Ham1 family protein 2324824..2325453 Methylocella silvestris BL2 7093373 YP_002362453.1 CDS Msil_2153 NC_011666.1 2325577 2325894 D KEGG: bid:Bind_0780 hypothetical protein; hypothetical protein 2325577..2325894 Methylocella silvestris BL2 7093374 YP_002362454.1 CDS Msil_2154 NC_011666.1 2325974 2326849 R KEGG: bid:Bind_3386 hypothetical protein; hypothetical protein complement(2325974..2326849) Methylocella silvestris BL2 7093375 YP_002362455.1 CDS Msil_2155 NC_011666.1 2326991 2328160 D KEGG: bid:Bind_3398 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 2326991..2328160 Methylocella silvestris BL2 7093376 YP_002362456.1 CDS Msil_2156 NC_011666.1 2328416 2330293 D PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: bid:Bind_3448 protein of unknown function DUF882; hypothetical protein 2328416..2330293 Methylocella silvestris BL2 7093377 YP_002362457.1 CDS Msil_2157 NC_011666.1 2330458 2330943 D PFAM: protein of unknown function DUF1052; KEGG: bid:Bind_0068 protein of unknown function DUF1052; hypothetical protein 2330458..2330943 Methylocella silvestris BL2 7093378 YP_002362458.1 CDS Msil_2158 NC_011666.1 2330945 2332906 R PFAM: protein of unknown function UPF0118; KEGG: rpa:RPA3845 membrane transporter; hypothetical protein complement(2330945..2332906) Methylocella silvestris BL2 7093379 YP_002362459.1 CDS Msil_2159 NC_011666.1 2333177 2334151 D KEGG: bid:Bind_3343 hypothetical protein; hypothetical protein 2333177..2334151 Methylocella silvestris BL2 7093380 YP_002362460.1 CDS Msil_2160 NC_011666.1 2334151 2335164 D PFAM: OmpA/MotB domain protein; KEGG: bid:Bind_3344 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 2334151..2335164 Methylocella silvestris BL2 7093381 YP_002362461.1 CDS Msil_2161 NC_011666.1 2335765 2337219 D PFAM: UbiA prenyltransferase; KEGG: bid:Bind_1029 UbiA prenyltransferase; hypothetical protein 2335765..2337219 Methylocella silvestris BL2 7093382 YP_002362462.1 CDS Msil_2162 NC_011666.1 2337228 2337692 D KEGG: bid:Bind_1028 hypothetical protein; hypothetical protein 2337228..2337692 Methylocella silvestris BL2 7093383 YP_002362463.1 CDS Msil_2163 NC_011666.1 2337683 2339011 D PFAM: FAD linked oxidase domain protein; KEGG: bid:Bind_1027 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 2337683..2339011 Methylocella silvestris BL2 7093384 YP_002362464.1 CDS Msil_2164 NC_011666.1 2339029 2339772 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_1026 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 2339029..2339772 Methylocella silvestris BL2 7093385 YP_002362465.1 CDS Msil_2165 NC_011666.1 2339879 2340811 D KEGG: bid:Bind_1709 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 2339879..2340811 Methylocella silvestris BL2 7093386 YP_002362466.1 CDS Msil_2166 NC_011666.1 2341245 2341526 D hypothetical protein 2341245..2341526 Methylocella silvestris BL2 7093387 YP_002362467.1 CDS Msil_2167 NC_011666.1 2341701 2342426 R KEGG: dbmo:Bmb006427.; hypothetical protein complement(2341701..2342426) Methylocella silvestris BL2 7093388 YP_002362468.1 CDS Msil_2168 NC_011666.1 2342431 2343084 R KEGG: nca:Noca_4254 kinetoplast DNA-associated protein; hypothetical protein complement(2342431..2343084) Methylocella silvestris BL2 7093389 YP_002362469.1 CDS Msil_2169 NC_011666.1 2343087 2343359 R hypothetical protein complement(2343087..2343359) Methylocella silvestris BL2 7093390 YP_002362470.1 CDS Msil_2170 NC_011666.1 2343441 2343689 D KEGG: gdi:GDI3589 hypothetical protein; hypothetical protein 2343441..2343689 Methylocella silvestris BL2 7093391 YP_002362471.1 CDS Msil_2171 NC_011666.1 2343689 2343994 D hypothetical protein 2343689..2343994 Methylocella silvestris BL2 7093392 YP_002362472.1 CDS Msil_2172 NC_011666.1 2344143 2345147 R hypothetical protein complement(2344143..2345147) Methylocella silvestris BL2 7093393 YP_002362473.1 CDS Msil_2173 NC_011666.1 2345449 2346534 D hypothetical protein 2345449..2346534 Methylocella silvestris BL2 7093394 YP_002362474.1 CDS Msil_2174 NC_011666.1 2346871 2347713 R hypothetical protein complement(2346871..2347713) Methylocella silvestris BL2 7093395 YP_002362475.1 CDS Msil_2175 NC_011666.1 2347717 2348685 R TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: aba:Acid345_1094 ParB-like partition proteins; parB-like partition protein complement(2347717..2348685) Methylocella silvestris BL2 7093396 YP_002362476.1 CDS Msil_2176 NC_011666.1 2348682 2349863 R KEGG: bth:BT_2355 site-specific DNA-methyltransferase; Adenine-specific DNA methylase-like protein complement(2348682..2349863) Methylocella silvestris BL2 7093397 YP_002362477.1 CDS Msil_2177 NC_011666.1 2350451 2350642 R hypothetical protein complement(2350451..2350642) Methylocella silvestris BL2 7093398 YP_002362478.1 CDS Msil_2178 NC_011666.1 2350642 2350884 R hypothetical protein complement(2350642..2350884) Methylocella silvestris BL2 7093399 YP_002362479.1 CDS Msil_2179 NC_011666.1 2351061 2352182 R TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: pmy:Pmen_3970 phage major capsid protein, HK97 family; phage major capsid protein, HK97 family complement(2351061..2352182) Methylocella silvestris BL2 7093400 YP_002362480.1 CDS Msil_2180 NC_011666.1 2352256 2352438 D KEGG: gur:Gura_1848 integrase catalytic subunit; integrase catalytic subunit 2352256..2352438 Methylocella silvestris BL2 7093401 YP_002362481.1 CDS Msil_2182 NC_011666.1 2353314 2353988 R PFAM: protein of unknown function DUF1275; KEGG: rpt:Rpal_1526 bicupin, oxalate decarboxylase family; hypothetical protein complement(2353314..2353988) Methylocella silvestris BL2 7093403 YP_002362482.1 CDS Msil_2183 NC_011666.1 2354278 2355432 R KEGG: rpt:Rpal_1526 bicupin, oxalate decarboxylase family; TIGRFAM: bicupin, oxalate decarboxylase family; PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein; oxalate decarboxylase family bicupin complement(2354278..2355432) Methylocella silvestris BL2 7093404 YP_002362483.1 CDS Msil_2185 NC_011666.1 2359686 2362556 D PFAM: transcriptional regulator domain protein; Tetratricopeptide TPR_4; KEGG: bja:blr4182 hypothetical protein; winged helix family transcriptional regulator 2359686..2362556 Methylocella silvestris BL2 7093406 YP_002362484.1 CDS Msil_2186 NC_011666.1 2362928 2363728 D PFAM: Acetoacetate decarboxylase; KEGG: rxy:Rxyl_1034 acetoacetate decarboxylase; acetoacetate decarboxylase 2362928..2363728 Methylocella silvestris BL2 7093407 YP_002362485.1 CDS Msil_2187 NC_011666.1 2363804 2365522 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rme:Rmet_1899 pyruvate dehydrogenase (cytochrome); thiamine pyrophosphate protein central subunit 2363804..2365522 Methylocella silvestris BL2 7093408 YP_002362486.1 CDS Msil_2188 NC_011666.1 2365611 2367029 D PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: azc:AZC_1354 cytochrome BD2 subunit I; cytochrome bd ubiquinol oxidase subunit I 2365611..2367029 Methylocella silvestris BL2 7093409 YP_002362487.1 CDS Msil_2189 NC_011666.1 2367033 2368040 D TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: mrd:Mrad2831_4860 cytochrome d ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase, subunit II 2367033..2368040 Methylocella silvestris BL2 7093410 YP_002362488.1 CDS Msil_2190 NC_011666.1 2368333 2369169 D KEGG: rle:RL2912 hypothetical protein; hypothetical protein 2368333..2369169 Methylocella silvestris BL2 7093411 YP_002362489.1 CDS Msil_2191 NC_011666.1 2369235 2370761 R PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B2121 outer membrane efflux protein; outer membrane efflux protein complement(2369235..2370761) Methylocella silvestris BL2 7093412 YP_002362490.1 CDS Msil_2192 NC_011666.1 2370748 2372763 R PFAM: Fusaric acid resistance protein conserved region; KEGG: bxe:Bxe_B2120 conserved hypothetical membrane protein, putative efflux pump; fusaric acid resistance protein complement(2370748..2372763) Methylocella silvestris BL2 7093413 YP_002362491.1 CDS Msil_2193 NC_011666.1 2372744 2373796 R with MdtO and MdtP is involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride; multidrug resistance protein MdtN complement(2372744..2373796) Methylocella silvestris BL2 7093414 YP_002362492.1 CDS Msil_2194 NC_011666.1 2373799 2374080 R KEGG: bxe:Bxe_B2118 hypothetical protein; hypothetical protein complement(2373799..2374080) Methylocella silvestris BL2 7093415 YP_002362493.1 CDS Msil_2197 NC_011666.1 2374923 2375303 D KEGG: mes:Meso_1085 exodeoxyribonuclease III; Exonuclease III-like protein 2374923..2375303 Methylocella silvestris BL2 7093418 YP_002362494.1 CDS Msil_2198 NC_011666.1 2375676 2375786 D KEGG: rpc:RPC_3563 hypothetical protein; hypothetical protein 2375676..2375786 Methylocella silvestris BL2 7093419 YP_002362495.1 CDS Msil_2199 NC_011666.1 2377422 2379086 R TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: swi:Swit_2196 phage/plasmid primase, P4 family; P4 family phage/plasmid primase complement(2377422..2379086) Methylocella silvestris BL2 7093420 YP_002362496.1 CDS Msil_2200 NC_011666.1 2379087 2380253 R KEGG: bbt:BBta_6607 putative DNA primase; putative DNA primase complement(2379087..2380253) Methylocella silvestris BL2 7093421 YP_002362497.1 CDS Msil_2201 NC_011666.1 2380367 2380555 R KEGG: fre:Franean1_5538 DNA binding domain-containing protein; hypothetical protein complement(2380367..2380555) Methylocella silvestris BL2 7093422 YP_002362498.1 CDS Msil_2202 NC_011666.1 2380616 2381197 R MerR family transcriptional regulator complement(2380616..2381197) Methylocella silvestris BL2 7093423 YP_002362499.1 CDS Msil_2203 NC_011666.1 2381281 2382495 R PFAM: integrase family protein; KEGG: met:M446_3983 integrase family protein; integrase family protein complement(2381281..2382495) Methylocella silvestris BL2 7093424 YP_002362500.1 CDS Msil_2204 NC_011666.1 2382924 2383712 R KEGG: xau:Xaut_0052 enoyl-(acyl carrier protein) reductase; enoyl-(acyl carrier protein) reductase complement(2382924..2383712) Methylocella silvestris BL2 7093426 YP_002362501.1 CDS Msil_2205 NC_011666.1 2383750 2384973 R PFAM: Beta-ketoacyl synthase; KEGG: bid:Bind_0332 beta-ketoacyl synthase; beta-ketoacyl synthase complement(2383750..2384973) Methylocella silvestris BL2 7093427 YP_002362502.1 CDS Msil_2206 NC_011666.1 2385115 2385642 R catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase complement(2385115..2385642) Methylocella silvestris BL2 7093428 YP_002362503.1 CDS Msil_2207 NC_011666.1 2385888 2386877 D PFAM: import inner membrane translocase subunit Tim44; KEGG: bid:Bind_0334 import inner membrane translocase subunit Tim44; import inner membrane translocase subunit Tim44 2385888..2386877 Methylocella silvestris BL2 7093429 YP_002362504.1 CDS Msil_2208 NC_011666.1 2387047 2387661 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mxa:MXAN_0877 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase 2387047..2387661 Methylocella silvestris BL2 7093430 YP_002362505.1 CDS Msil_2209 NC_011666.1 2387776 2388135 R TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: bid:Bind_0103 iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly accessory protein complement(2387776..2388135) Methylocella silvestris BL2 7093431 YP_002362506.1 CDS Msil_2210 NC_011666.1 2388332 2388637 R KEGG: cak:Caul_4139 hypothetical protein; hypothetical protein complement(2388332..2388637) Methylocella silvestris BL2 7093432 YP_002362507.1 CDS Msil_2211 NC_011666.1 2388639 2392169 R KEGG: bid:Bind_0894 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; transcription-repair coupling factor complement(2388639..2392169) Methylocella silvestris BL2 7093433 YP_002362508.1 CDS Msil_2212 NC_011666.1 2392215 2392511 R PFAM: protein of unknown function DUF339; KEGG: bid:Bind_0893 protein of unknown function DUF339; hypothetical protein complement(2392215..2392511) Methylocella silvestris BL2 7093434 YP_002362509.1 CDS Msil_2213 NC_011666.1 2392675 2393031 D PFAM: regulatory protein ArsR; KEGG: cak:Caul_3434 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 2392675..2393031 Methylocella silvestris BL2 7093435 YP_002362510.1 CDS Msil_2214 NC_011666.1 2393015 2393983 D PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: rpi:Rpic_4711 activator of HSP90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein 2393015..2393983 Methylocella silvestris BL2 7093436 YP_002362511.1 CDS Msil_2215 NC_011666.1 2394026 2394505 D PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: mrd:Mrad2831_6218 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 2394026..2394505 Methylocella silvestris BL2 7093437 YP_002362512.1 CDS Msil_2216 NC_011666.1 2394607 2396229 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpo:Mpop_0224 ABC transporter related; ABC transporter-like protein complement(2394607..2396229) Methylocella silvestris BL2 7093438 YP_002362513.1 CDS Msil_2217 NC_011666.1 2396337 2398409 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 2396337..2398409 Methylocella silvestris BL2 7091339 YP_002362514.1 CDS Msil_2218 NC_011666.1 2398395 2399612 R PFAM: major facilitator superfamily MFS_1; KEGG: cur:cu0340 major facilitator superfamily permease; major facilitator superfamily protein complement(2398395..2399612) Methylocella silvestris BL2 7091340 YP_002362515.1 CDS Msil_2219 NC_011666.1 2399617 2400345 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bid:Bind_2424 methyltransferase type 11; type 11 methyltransferase complement(2399617..2400345) Methylocella silvestris BL2 7091341 YP_002362516.1 CDS Msil_2220 NC_011666.1 2400342 2400797 R PFAM: DNA polymerase III chi subunit HolC; KEGG: bid:Bind_0649 DNA polymerase III chi subunit HolC; DNA polymerase III chi subunit HolC complement(2400342..2400797) Methylocella silvestris BL2 7091342 YP_002362517.1 CDS Msil_2221 NC_011666.1 2400882 2402501 R PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bid:Bind_0650 leucyl aminopeptidase; leucyl aminopeptidase complement(2400882..2402501) Methylocella silvestris BL2 7091343 YP_002362518.1 CDS Msil_2222 NC_011666.1 2403095 2404180 D PFAM: permease YjgP/YjgQ family protein; KEGG: bid:Bind_0651 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 2403095..2404180 Methylocella silvestris BL2 7091344 YP_002362519.1 CDS Msil_2223 NC_011666.1 2404180 2406849 D PFAM: Organic solvent tolerance protein; KEGG: bid:Bind_0652 organic solvent tolerance protein; organic solvent tolerance protein 2404180..2406849 Methylocella silvestris BL2 7091345 YP_002362520.1 CDS Msil_2224 NC_011666.1 2406985 2407932 D KEGG: bid:Bind_0653 hypothetical protein; hypothetical protein 2406985..2407932 Methylocella silvestris BL2 7091346 YP_002362521.1 CDS Msil_2225 NC_011666.1 2408015 2409052 D KEGG: mpo:Mpop_3923 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 2408015..2409052 Methylocella silvestris BL2 7091347 YP_002362522.1 CDS Msil_2226 NC_011666.1 2409052 2409918 D TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: bid:Bind_0654 dimethyladenosine transferase; dimethyladenosine transferase 2409052..2409918 Methylocella silvestris BL2 7091348 YP_002362523.1 CDS Msil_2227 NC_011666.1 2409948 2410805 R PFAM: lipolytic protein G-D-S-L family; KEGG: bid:Bind_2189 lipolytic protein G-D-S-L family; G-D-S-L family lipolytic protein complement(2409948..2410805) Methylocella silvestris BL2 7091349 YP_002362524.1 CDS Msil_2228 NC_011666.1 2410748 2411848 R KEGG: bid:Bind_2190 OpgC protein; OpgC protein complement(2410748..2411848) Methylocella silvestris BL2 7091350 YP_002362525.1 CDS Msil_2229 NC_011666.1 2411946 2413562 R TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: bid:Bind_2191 carbohydrate kinase, YjeF related protein; carbohydrate kinase complement(2411946..2413562) Methylocella silvestris BL2 7091351 YP_002362526.1 CDS Msil_2230 NC_011666.1 2413695 2414024 D TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: bid:Bind_2192 hemimethylated DNA binding protein; hemimethylated DNA binding protein 2413695..2414024 Methylocella silvestris BL2 7091352 YP_002362527.1 CDS Msil_2231 NC_011666.1 2414040 2414744 R PFAM: Ion transport 2 domain protein; KEGG: bid:Bind_1808 ion transport 2 domain protein; Ion transport 2 domain-containing protein complement(2414040..2414744) Methylocella silvestris BL2 7091353 YP_002362528.1 CDS Msil_2232 NC_011666.1 2415007 2417790 R KEGG: bid:Bind_2067 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A complement(2415007..2417790) Methylocella silvestris BL2 7091354 YP_002362529.1 CDS Msil_2233 NC_011666.1 2417964 2418470 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: bid:Bind_2069 single-strand binding protein; single-strand binding protein complement(2417964..2418470) Methylocella silvestris BL2 7091355 YP_002362530.1 CDS Msil_2234 NC_011666.1 2418723 2420051 R PFAM: sodium:dicarboxylate symporter; KEGG: bja:blr4298 C4-dicarboxylate transport protein; sodium:dicarboxylate symporter complement(2418723..2420051) Methylocella silvestris BL2 7091356 YP_002362531.1 CDS Msil_2235 NC_011666.1 2420263 2423313 D TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: bid:Bind_2242 excinuclease ABC, A subunit; excinuclease ABC subunit A 2420263..2423313 Methylocella silvestris BL2 7091357 YP_002362532.1 CDS Msil_2236 NC_011666.1 2423320 2424231 D PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: met:M446_2106 methyltransferase small; methyltransferase small 2423320..2424231 Methylocella silvestris BL2 7091358 YP_002362533.1 CDS Msil_2237 NC_011666.1 2424228 2424995 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: pzu:PHZ_c2300 ribosomal small subunit pseudouridine synthase A; pseudouridine synthase 2424228..2424995 Methylocella silvestris BL2 7091359 YP_002362534.1 CDS Msil_2238 NC_011666.1 2425117 2426058 D KEGG: bid:Bind_1462 hypothetical protein; hypothetical protein 2425117..2426058 Methylocella silvestris BL2 7091360 YP_002362535.1 CDS Msil_2239 NC_011666.1 2426055 2426579 D hypothetical protein 2426055..2426579 Methylocella silvestris BL2 7091361 YP_002362536.1 CDS Msil_2240 NC_011666.1 2426728 2427477 D TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bid:Bind_2907 ubiquinone/menaquinone biosynthesis methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase 2426728..2427477 Methylocella silvestris BL2 7091362 YP_002362537.1 CDS Msil_2241 NC_011666.1 2427506 2429083 D TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: bid:Bind_2908 2-polyprenylphenol 6-hydroxylase; 2-polyprenylphenol 6-hydroxylase 2427506..2429083 Methylocella silvestris BL2 7091363 YP_002362538.1 CDS Msil_2242 NC_011666.1 2429240 2430505 D KEGG: bid:Bind_2910 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 2429240..2430505 Methylocella silvestris BL2 7091364 YP_002362539.1 CDS Msil_2243 NC_011666.1 2430502 2430984 D KEGG: rpb:RPB_0623 deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 2430502..2430984 Methylocella silvestris BL2 7091365 YP_002362540.1 CDS Msil_2244 NC_011666.1 2430981 2431427 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: bid:Bind_2912 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 2430981..2431427 Methylocella silvestris BL2 7091366 YP_002362541.1 CDS Msil_2245 NC_011666.1 2431432 2432025 R PFAM: nitroreductase; KEGG: bid:Bind_1571 nitroreductase; nitroreductase complement(2431432..2432025) Methylocella silvestris BL2 7091367 YP_002362542.1 CDS Msil_2246 NC_011666.1 2432175 2433224 R TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bid:Bind_1572 sulfate ABC transporter, periplasmic sulfate-binding protein; sulfate ABC transporter, periplasmic sulfate-binding protein complement(2432175..2433224) Methylocella silvestris BL2 7091368 YP_002362543.1 CDS Msil_2247 NC_011666.1 2433309 2434109 R PFAM: regulatory protein LysR; TOBE domain protein; KEGG: bid:Bind_2034 transcriptional regulator, ModE family; ModE family transcriptional regulator complement(2433309..2434109) Methylocella silvestris BL2 7091369 YP_002362544.1 CDS Msil_2248 NC_011666.1 2434180 2435277 R PFAM: glycoside hydrolase family 3 domain protein; KEGG: bid:Bind_0865 glycoside hydrolase family 3 domain protein; glycoside hydrolase family 3 complement(2434180..2435277) Methylocella silvestris BL2 7091370 YP_002362545.1 CDS Msil_2249 NC_011666.1 2435438 2436196 R KEGG: bxe:Bxe_B2600 hypothetical protein; hypothetical protein complement(2435438..2436196) Methylocella silvestris BL2 7091371 YP_002362546.1 CDS Msil_2250 NC_011666.1 2436296 2436508 R KEGG: bxe:Bxe_B2601 hypothetical protein; hypothetical protein complement(2436296..2436508) Methylocella silvestris BL2 7091372 YP_002362547.1 CDS Msil_2251 NC_011666.1 2436744 2437763 D KEGG: bja:bll4740 nonspecific acid phosphatase precursor; nonspecific acid phosphatase 2436744..2437763 Methylocella silvestris BL2 7091373 YP_002362548.1 CDS Msil_2252 NC_011666.1 2437778 2437936 R hypothetical protein complement(2437778..2437936) Methylocella silvestris BL2 7091374 YP_002362549.1 CDS Msil_2253 NC_011666.1 2438155 2438709 D KEGG: bid:Bind_0864 hypothetical protein; hypothetical protein 2438155..2438709 Methylocella silvestris BL2 7091375 YP_002362550.1 CDS Msil_2254 NC_011666.1 2438813 2439604 D PFAM: ATP-NAD/AcoX kinase; KEGG: bid:Bind_0863 NAD(+) kinase; NAD(+) kinase 2438813..2439604 Methylocella silvestris BL2 7091376 YP_002362551.1 CDS Msil_2255 NC_011666.1 2439629 2440225 D PFAM: NUDIX hydrolase; KEGG: bid:Bind_0862 NUDIX hydrolase; NUDIX hydrolase 2439629..2440225 Methylocella silvestris BL2 7091377 YP_002362552.1 CDS Msil_2256 NC_011666.1 2440238 2441587 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bid:Bind_2127 major facilitator superfamily MFS_1; major facilitator superfamily protein 2440238..2441587 Methylocella silvestris BL2 7091378 YP_002362553.1 CDS Msil_2257 NC_011666.1 2441641 2442303 D PFAM: HpcH/HpaI aldolase; KEGG: met:M446_2314 citrate (pro-3S)-lyase; HpcH/HpaI aldolase 2441641..2442303 Methylocella silvestris BL2 7091379 YP_002362554.1 CDS Msil_2258 NC_011666.1 2448909 2449055 R hypothetical protein complement(2448909..2449055) Methylocella silvestris BL2 7091385 YP_002362555.1 CDS Msil_2259 NC_011666.1 2449231 2449428 R PFAM: protein of unknown function DUF1192; KEGG: mrd:Mrad2831_0815 protein of unknown function DUF1192; hypothetical protein complement(2449231..2449428) Methylocella silvestris BL2 7091386 YP_002362556.1 CDS Msil_2260 NC_011666.1 2449517 2451322 R TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: bja:blr6213 methanol dehydrogenase large subunit-like protein; PQQ-dependent dehydrogenase complement(2449517..2451322) Methylocella silvestris BL2 7091387 YP_002362557.1 CDS Msil_2261 NC_011666.1 2451365 2451676 R KEGG: mrd:Mrad2831_3568 hypothetical protein; hypothetical protein complement(2451365..2451676) Methylocella silvestris BL2 7091388 YP_002362558.1 CDS Msil_2262 NC_011666.1 2452021 2452305 D hypothetical protein 2452021..2452305 Methylocella silvestris BL2 7091389 YP_002362559.1 CDS Msil_2263 NC_011666.1 2452554 2453792 D PFAM: metallophosphoesterase; KEGG: pph:Ppha_1460 metallophosphoesterase; metallophosphoesterase 2452554..2453792 Methylocella silvestris BL2 7091390 YP_002362560.1 CDS Msil_2264 NC_011666.1 2453792 2457265 D KEGG: mrd:Mrad2831_0725 hypothetical protein; hypothetical protein 2453792..2457265 Methylocella silvestris BL2 7091391 YP_002362561.1 CDS Msil_2265 NC_011666.1 2457262 2458080 R KEGG: ava:Ava_4835 hypothetical protein; hypothetical protein complement(2457262..2458080) Methylocella silvestris BL2 7091392 YP_002362562.1 CDS Msil_2266 NC_011666.1 2458404 2459306 R PFAM: metallophosphoesterase; KEGG: bid:Bind_3442 metallophosphoesterase; metallophosphoesterase complement(2458404..2459306) Methylocella silvestris BL2 7091393 YP_002362563.1 CDS Msil_2267 NC_011666.1 2459329 2460300 R PFAM: Rubrerythrin; protein of unknown function DUF125 transmembrane; KEGG: bid:Bind_3443 rubrerythrin; hypothetical protein complement(2459329..2460300) Methylocella silvestris BL2 7091394 YP_002362564.1 CDS Msil_2268 NC_011666.1 2460459 2461304 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rle:pRL120615 putative hydroxypyruvate isomerase; Hydroxypyruvate isomerase 2460459..2461304 Methylocella silvestris BL2 7091395 YP_002362565.1 CDS Msil_2269 NC_011666.1 2461374 2461880 D PFAM: GCN5-related N-acetyltransferase; KEGG: bid:Bind_3422 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2461374..2461880 Methylocella silvestris BL2 7091396 YP_002362566.1 CDS Msil_2270 NC_011666.1 2461892 2463991 R PFAM: protein of unknown function DUF1355; KEGG: bid:Bind_3475 hypothetical protein; hypothetical protein complement(2461892..2463991) Methylocella silvestris BL2 7091397 YP_002362567.1 CDS Msil_2271 NC_011666.1 2464154 2464825 R PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bja:blr5281 two-component response regulator; LuxR family transcriptional regulator complement(2464154..2464825) Methylocella silvestris BL2 7091398 YP_002362568.1 CDS Msil_2272 NC_011666.1 2464822 2466237 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: bja:blr5280 two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase complement(2464822..2466237) Methylocella silvestris BL2 7091399 YP_002362569.1 CDS Msil_2275 NC_011666.1 2467485 2468105 R TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: cak:Caul_3569 DNA-3-methyladenine glycosylase; DNA-3-methyladenine glycosylase complement(2467485..2468105) Methylocella silvestris BL2 7091401 YP_002362570.1 CDS Msil_2276 NC_011666.1 2468102 2468482 R KEGG: mlo:mll4584 hypothetical protein; hypothetical protein complement(2468102..2468482) Methylocella silvestris BL2 7091402 YP_002362571.1 CDS Msil_2277 NC_011666.1 2468547 2470106 R laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification; multicopper oxidase complement(2468547..2470106) Methylocella silvestris BL2 7091403 YP_002362572.1 CDS Msil_2278 NC_011666.1 2470322 2471146 R PFAM: metallophosphoesterase; KEGG: bid:Bind_3472 metallophosphoesterase; metallophosphoesterase complement(2470322..2471146) Methylocella silvestris BL2 7091404 YP_002362573.1 CDS Msil_2279 NC_011666.1 2471213 2471809 R PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: bid:Bind_3471 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase complement(2471213..2471809) Methylocella silvestris BL2 7091405 YP_002362574.1 CDS Msil_2280 NC_011666.1 2472087 2472461 R PFAM: protein of unknown function DUF710; KEGG: bid:Bind_3470 protein of unknown function DUF710; hypothetical protein complement(2472087..2472461) Methylocella silvestris BL2 7091407 YP_002362575.1 CDS Msil_2281 NC_011666.1 2472496 2472783 R KEGG: bid:Bind_3469 hypothetical protein; hypothetical protein complement(2472496..2472783) Methylocella silvestris BL2 7091408 YP_002362576.1 CDS Msil_2282 NC_011666.1 2473247 2474254 D KEGG: bid:Bind_3468 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 2473247..2474254 Methylocella silvestris BL2 7091409 YP_002362577.1 CDS Msil_2283 NC_011666.1 2474251 2475474 D PFAM: phosphoglycerate kinase; KEGG: bid:Bind_3467 phosphoglycerate kinase; phosphoglycerate kinase 2474251..2475474 Methylocella silvestris BL2 7091410 YP_002362578.1 CDS Msil_2284 NC_011666.1 2475512 2476123 R PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: bid:Bind_0802 nucleoside 2-deoxyribosyltransferase; nucleoside 2-deoxyribosyltransferase complement(2475512..2476123) Methylocella silvestris BL2 7091411 YP_002362579.1 CDS Msil_2285 NC_011666.1 2476281 2476979 D hypothetical protein 2476281..2476979 Methylocella silvestris BL2 7091412 YP_002362580.1 CDS Msil_2286 NC_011666.1 2477006 2477881 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bid:Bind_0319 TPR repeat-containing protein; hypothetical protein complement(2477006..2477881) Methylocella silvestris BL2 7091413 YP_002362581.1 CDS rpsU NC_011666.1 2477960 2478199 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(2477960..2478199) Methylocella silvestris BL2 7091414 YP_002362582.1 CDS Msil_2288 NC_011666.1 2478377 2479477 R KEGG: bid:Bind_0439 phosphoribosylaminoimidazole carboxylase, ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(2478377..2479477) Methylocella silvestris BL2 7091415 YP_002362583.1 CDS Msil_2289 NC_011666.1 2479483 2480028 R KEGG: bid:Bind_0440 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(2479483..2480028) Methylocella silvestris BL2 7091416 YP_002362584.1 CDS Msil_2290 NC_011666.1 2480286 2480888 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bid:Bind_1564 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 2480286..2480888 Methylocella silvestris BL2 7091417 YP_002362585.1 CDS Msil_2291 NC_011666.1 2480984 2481739 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mag:amb0795 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase; type 11 methyltransferase complement(2480984..2481739) Methylocella silvestris BL2 7091418 YP_002362586.1 CDS Msil_2293 NC_011666.1 2484127 2485026 R TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: bid:Bind_1045 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B complement(2484127..2485026) Methylocella silvestris BL2 7091420 YP_002362587.1 CDS rbfA NC_011666.1 2485023 2485490 R associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A complement(2485023..2485490) Methylocella silvestris BL2 7091586 YP_002362588.1 CDS Msil_2295 NC_011666.1 2485584 2488244 R TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; GTP-binding protein HSR1-related; elongation factor Tu domain 2 protein; translation initiation factor IF-2 domain protein; Initiation factor 2 associated domain protein; KEGG: bid:Bind_1047 translation initiation factor IF-2; translation initiation factor IF-2 complement(2485584..2488244) Methylocella silvestris BL2 7090279 YP_002362589.1 CDS Msil_2296 NC_011666.1 2488482 2489186 R PFAM: protein of unknown function DUF448; KEGG: bid:Bind_1048 protein of unknown function DUF448; hypothetical protein complement(2488482..2489186) Methylocella silvestris BL2 7090280 YP_002362590.1 CDS Msil_2297 NC_011666.1 2489201 2490799 R KEGG: bid:Bind_1049 NusA antitermination factor; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH type 1 domain protein; NusA domain protein; SMART: KH domain protein; NusA antitermination factor complement(2489201..2490799) Methylocella silvestris BL2 7090281 YP_002362591.1 CDS Msil_2298 NC_011666.1 2490812 2491651 R PFAM: protein of unknown function DUF150; KEGG: bid:Bind_1050 protein of unknown function DUF150; hypothetical protein complement(2490812..2491651) Methylocella silvestris BL2 7090282 YP_002362592.1 CDS Msil_2299 NC_011666.1 2492105 2493511 R PFAM: Alkaline phosphatase; KEGG: mab:MAB_0087c alkaline phosphatase; 6-phosphatase complement(2492105..2493511) Methylocella silvestris BL2 7090283 YP_002362593.1 CDS Msil_2300 NC_011666.1 2493945 2494904 R PFAM: protein of unknown function DUF403; KEGG: bid:Bind_3051 protein of unknown function DUF403; hypothetical protein complement(2493945..2494904) Methylocella silvestris BL2 7090284 YP_002362594.1 CDS Msil_2301 NC_011666.1 2495042 2496553 R PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bid:Bind_3052 protein of unknown function DUF404; hypothetical protein complement(2495042..2496553) Methylocella silvestris BL2 7090285 YP_002362595.1 CDS Msil_2302 NC_011666.1 2496844 2497047 D hypothetical protein 2496844..2497047 Methylocella silvestris BL2 7090286 YP_002362596.1 CDS Msil_2303 NC_011666.1 2497127 2497711 D PFAM: beta-Ig-H3/fasciclin; KEGG: xop:PXO_03050 beta-Ig-H3/fasciclin repeat containing protein; beta-Ig-H3/fasciclin 2497127..2497711 Methylocella silvestris BL2 7090287 YP_002362597.1 CDS Msil_2304 NC_011666.1 2497937 2499007 D KEGG: rpb:RPB_3925 hypothetical protein; hypothetical protein 2497937..2499007 Methylocella silvestris BL2 7090288 YP_002362598.1 CDS Msil_2305 NC_011666.1 2499008 2499754 R PFAM: protein of unknown function DUF28; KEGG: bid:Bind_0345 protein of unknown function DUF28; hypothetical protein complement(2499008..2499754) Methylocella silvestris BL2 7090289 YP_002362599.1 CDS Msil_2306 NC_011666.1 2499943 2500632 R PFAM: Glutathione S-transferase domain; KEGG: bid:Bind_0346 glutathione S-transferase domain; glutathione S-transferase domain-containing protein complement(2499943..2500632) Methylocella silvestris BL2 7090290 YP_002362600.1 CDS Msil_2307 NC_011666.1 2500914 2501825 R TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bid:Bind_0347 RNA polymerase, sigma 32 subunit, RpoH; RNA polymerase sigma-32 subunit RpoH complement(2500914..2501825) Methylocella silvestris BL2 7090291 YP_002362601.1 CDS Msil_2308 NC_011666.1 2502188 2503216 R KEGG: bid:Bind_0348 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase complement(2502188..2503216) Methylocella silvestris BL2 7090292 YP_002362602.1 CDS Msil_2309 NC_011666.1 2503326 2503556 R hypothetical protein complement(2503326..2503556) Methylocella silvestris BL2 7090293 YP_002362603.1 CDS Msil_2310 NC_011666.1 2503868 2504104 R TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: bid:Bind_2706 regulatory protein, FmdB family; FmdB family regulatory protein complement(2503868..2504104) Methylocella silvestris BL2 7090294 YP_002362604.1 CDS Msil_2311 NC_011666.1 2504228 2504695 R KEGG: bid:Bind_1200 hypothetical protein; hypothetical protein complement(2504228..2504695) Methylocella silvestris BL2 7090295 YP_002362605.1 CDS Msil_2312 NC_011666.1 2504692 2505504 R PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: mpo:Mpop_4998 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(2504692..2505504) Methylocella silvestris BL2 7090296 YP_002362606.1 CDS Msil_2313 NC_011666.1 2505501 2505971 R PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: mpo:Mpop_4997 protein tyrosine phosphatase; protein tyrosine phosphatase complement(2505501..2505971) Methylocella silvestris BL2 7090297 YP_002362607.1 CDS Msil_2314 NC_011666.1 2505994 2507016 R KEGG: gur:Gura_0821 polysaccharide deacetylase; polysaccharide deacetylase complement(2505994..2507016) Methylocella silvestris BL2 7090298 YP_002362608.1 CDS Msil_2315 NC_011666.1 2507027 2507470 D PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0003216 putative acetyltransferase protein; N-acetyltransferase GCN5 2507027..2507470 Methylocella silvestris BL2 7090299 YP_002362609.1 CDS Msil_2316 NC_011666.1 2507467 2508534 R KEGG: met:M446_2080 hypothetical protein; hypothetical protein complement(2507467..2508534) Methylocella silvestris BL2 7090300 YP_002362610.1 CDS Msil_2317 NC_011666.1 2508927 2510243 R PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: mrd:Mrad2831_0847 protein of unknown function DUF21; hypothetical protein complement(2508927..2510243) Methylocella silvestris BL2 7090301 YP_002362611.1 CDS Msil_2318 NC_011666.1 2510248 2512095 R PFAM: shikimate kinase; 3-dehydroquinate synthase; KEGG: bid:Bind_0354 shikimate kinase., 3-dehydroquinate synthase; 3-dehydroquinate synthase complement(2510248..2512095) Methylocella silvestris BL2 7090302 YP_002362612.1 CDS Msil_2319 NC_011666.1 2512355 2513086 D PFAM: OmpW family protein; KEGG: bid:Bind_0777 OmpW family protein; OmpW family protein 2512355..2513086 Methylocella silvestris BL2 7090303 YP_002362613.1 CDS Msil_2320 NC_011666.1 2513191 2515380 R PFAM: Amylo-alpha-16-glucosidase; KEGG: met:M446_5323 amylo-alpha-16-glucosidase; amylo-alpha-16-glucosidase complement(2513191..2515380) Methylocella silvestris BL2 7090304 YP_002362614.1 CDS Msil_2321 NC_011666.1 2515489 2516715 R PFAM: glycosyl transferase group 1; KEGG: met:M446_5322 glycosyl transferase group 1; group 1 glycosyl transferase complement(2515489..2516715) Methylocella silvestris BL2 7090305 YP_002362615.1 CDS Msil_2322 NC_011666.1 2517000 2519807 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bid:Bind_3201 TPR repeat-containing protein; hypothetical protein complement(2517000..2519807) Methylocella silvestris BL2 7090306 YP_002362616.1 CDS Msil_2323 NC_011666.1 2520107 2520472 D PFAM: response regulator receiver; KEGG: bid:Bind_1267 response regulator receiver and SARP domain protein; response regulator receiver protein 2520107..2520472 Methylocella silvestris BL2 7090307 YP_002362617.1 CDS hrcA NC_011666.1 2520567 2521661 D Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 2520567..2521661 Methylocella silvestris BL2 7090308 YP_002362618.1 CDS Msil_2325 NC_011666.1 2521686 2522174 R PFAM: regulatory protein MarR; KEGG: met:M446_4256 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(2521686..2522174) Methylocella silvestris BL2 7090309 YP_002362619.1 CDS Msil_2326 NC_011666.1 2522297 2525074 R TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: bid:Bind_1263 DNA mismatch repair protein MutS; DNA mismatch repair protein MutS complement(2522297..2525074) Methylocella silvestris BL2 7090310 YP_002362620.1 CDS Msil_2327 NC_011666.1 2525158 2527134 R PFAM: K potassium transporter; KEGG: bid:Bind_1262 K potassium transporter; K potassium transporter complement(2525158..2527134) Methylocella silvestris BL2 7090311 YP_002362621.1 CDS Msil_2329 NC_011666.1 2529918 2531237 R KEGG: bid:Bind_0795 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase complement(2529918..2531237) Methylocella silvestris BL2 7090313 YP_002362622.1 CDS Msil_2330 NC_011666.1 2532105 2533721 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bid:Bind_3530 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2532105..2533721 Methylocella silvestris BL2 7090314 YP_002362623.1 CDS Msil_2331 NC_011666.1 2533885 2535570 D PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: aba:Acid345_1748 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2533885..2535570 Methylocella silvestris BL2 7090315 YP_002362624.1 CDS Msil_2332 NC_011666.1 2535576 2537282 D PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mms:mma_0955 glutathione-regulated potassium-efflux system protein KefB; sodium/hydrogen exchanger 2535576..2537282 Methylocella silvestris BL2 7090316 YP_002362625.1 CDS Msil_2333 NC_011666.1 2537339 2537734 D KEGG: rpe:RPE_2057 membrane protein-like protein; hypothetical protein 2537339..2537734 Methylocella silvestris BL2 7090317 YP_002362626.1 CDS Msil_2334 NC_011666.1 2537748 2538476 D PFAM: phosphoesterase PA-phosphatase related; KEGG: rsh:Rsph17029_1755 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 2537748..2538476 Methylocella silvestris BL2 7090318 YP_002362627.1 CDS Msil_2335 NC_011666.1 2538537 2539475 D PFAM: diacylglycerol kinase catalytic region; KEGG: ccr:CC_3555 hypothetical protein; diacylglycerol kinase catalytic subunit 2538537..2539475 Methylocella silvestris BL2 7090319 YP_002362628.1 CDS Msil_2336 NC_011666.1 2539472 2540308 D PFAM: metallophosphoesterase; KEGG: pzu:PHZ_c0307 3',5'-cyclic-nucleotide phosphodiesterase; metallophosphoesterase 2539472..2540308 Methylocella silvestris BL2 7090320 YP_002362629.1 CDS Msil_2337 NC_011666.1 2540327 2540569 R KEGG: bid:Bind_3108 hypothetical protein; hypothetical protein complement(2540327..2540569) Methylocella silvestris BL2 7090321 YP_002362630.1 CDS Msil_2338 NC_011666.1 2540809 2541210 D KEGG: bam:Bamb_2398 hypothetical protein; hypothetical protein 2540809..2541210 Methylocella silvestris BL2 7090322 YP_002362631.1 CDS Msil_2339 NC_011666.1 2541314 2542465 D PFAM: domain of unknown function DUF1745; KEGG: bte:BTH_II0732 hypothetical protein; hypothetical protein 2541314..2542465 Methylocella silvestris BL2 7090323 YP_002362632.1 CDS Msil_2340 NC_011666.1 2542452 2543915 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ppf:Pput_2172 PAS/PAC sensor hybrid histidine kinase; histidine kinase 2542452..2543915 Methylocella silvestris BL2 7090324 YP_002362633.1 CDS Msil_2341 NC_011666.1 2543947 2544576 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: csa:Csal_0866 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(2543947..2544576) Methylocella silvestris BL2 7090325 YP_002362634.1 CDS Msil_2342 NC_011666.1 2545397 2546917 D PFAM: Aldehyde Dehydrogenase; KEGG: bid:Bind_2852 aldehyde dehydrogenase; aldehyde dehydrogenase 2545397..2546917 Methylocella silvestris BL2 7090326 YP_002362635.1 CDS Msil_2343 NC_011666.1 2547092 2548633 R KEGG: bid:Bind_3661 hypothetical protein; hypothetical protein complement(2547092..2548633) Methylocella silvestris BL2 7090327 YP_002362636.1 CDS Msil_2344 NC_011666.1 2549189 2549965 R PFAM: PRC-barrel domain protein; KEGG: sbl:Sbal_2296 hypothetical protein; PRC-barrel domain-containing protein complement(2549189..2549965) Methylocella silvestris BL2 7090328 YP_002362637.1 CDS Msil_2345 NC_011666.1 2550286 2550642 D TIGRFAM: phasin; PFAM: Phasin 2 family protein; KEGG: met:M446_2947 phasin; phasin 2550286..2550642 Methylocella silvestris BL2 7090329 YP_002362638.1 CDS Msil_2346 NC_011666.1 2551102 2551596 D PFAM: ferric-uptake regulator; KEGG: bid:Bind_0491 ferric uptake regulator, Fur family; Fur family ferric uptake regulator 2551102..2551596 Methylocella silvestris BL2 7090330 YP_002362639.1 CDS Msil_2347 NC_011666.1 2551745 2552977 D PFAM: peptidase M48 Ste24p; KEGG: bid:Bind_2454 STE24 endopeptidase; Ste24 endopeptidase 2551745..2552977 Methylocella silvestris BL2 7090331 YP_002362640.1 CDS Msil_2348 NC_011666.1 2553024 2553584 D PFAM: conserved hypothetical protein; KEGG: rpc:RPC_0236 hypothetical protein; hypothetical protein 2553024..2553584 Methylocella silvestris BL2 7090332 YP_002362641.1 CDS Msil_2349 NC_011666.1 2553589 2555439 R PFAM: protein of unknown function RIO1; tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: bja:blr3604 serine/threonine kinase; serine/threonine protein kinase complement(2553589..2555439) Methylocella silvestris BL2 7090333 YP_002362642.1 CDS Msil_2350 NC_011666.1 2555579 2556028 R PFAM: peptidylprolyl isomerase FKBP-type; KEGG: rpe:RPE_2711 peptidylprolyl isomerase; FKBP-type peptidylprolyl isomerase complement(2555579..2556028) Methylocella silvestris BL2 7090334 YP_002362643.1 CDS Msil_2351 NC_011666.1 2556087 2556788 R TIGRFAM: type VI secretion-associated protein, BMA_A0400 family; KEGG: bja:blr3602 hypothetical protein; type VI secretion-associated protein complement(2556087..2556788) Methylocella silvestris BL2 7090335 YP_002362644.1 CDS Msil_2352 NC_011666.1 2556793 2560338 R TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bja:blr3601 hypothetical protein; type VI secretion protein IcmF complement(2556793..2560338) Methylocella silvestris BL2 7090336 YP_002362645.1 CDS Msil_2353 NC_011666.1 2560345 2561829 R TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein; PFAM: OmpA/MotB domain protein; KEGG: bja:blr3600 hypothetical protein; DotU family type IV / VI secretion system protein complement(2560345..2561829) Methylocella silvestris BL2 7090337 YP_002362646.1 CDS Msil_2354 NC_011666.1 2561846 2563186 R TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: bja:blr3599 hypothetical protein; type VI secretion protein complement(2561846..2563186) Methylocella silvestris BL2 7090338 YP_002362647.1 CDS Msil_2355 NC_011666.1 2563246 2564607 R TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein; KEGG: bja:blr3598 hypothetical protein; FHA domain-containing protein complement(2563246..2564607) Methylocella silvestris BL2 7090339 YP_002362648.1 CDS Msil_2356 NC_011666.1 2564643 2565185 R KEGG: bja:blr3597 hypothetical protein; hypothetical protein complement(2564643..2565185) Methylocella silvestris BL2 7090340 YP_002362649.1 CDS Msil_2357 NC_011666.1 2565212 2567071 R TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bja:blr3596 hypothetical protein; ImpA family type VI secretion-associated protein complement(2565212..2567071) Methylocella silvestris BL2 7090341 YP_002362650.1 CDS Msil_2358 NC_011666.1 2567293 2568618 D KEGG: bja:bll3595 hypothetical protein; hypothetical protein 2567293..2568618 Methylocella silvestris BL2 7090342 YP_002362651.1 CDS Msil_2359 NC_011666.1 2568630 2569565 R hypothetical protein complement(2568630..2569565) Methylocella silvestris BL2 7090343 YP_002362652.1 CDS Msil_2360 NC_011666.1 2570154 2570705 D TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: bja:bll3594 hypothetical protein; type VI secretion protein 2570154..2570705 Methylocella silvestris BL2 7090344 YP_002362653.1 CDS Msil_2361 NC_011666.1 2570723 2572237 D TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: bja:bll3593 hypothetical protein; type VI secretion protein EvpB 2570723..2572237 Methylocella silvestris BL2 7090345 YP_002362654.1 CDS Msil_2362 NC_011666.1 2572355 2572840 D TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: sus:Acid_0233 hypothetical protein; type VI secretion system effector 2572355..2572840 Methylocella silvestris BL2 7090346 YP_002362655.1 CDS Msil_2363 NC_011666.1 2572969 2573517 D TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: bja:bll3591 hypothetical protein; type VI secretion system lysozyme-like protein 2572969..2573517 Methylocella silvestris BL2 7090347 YP_002362656.1 CDS Msil_2364 NC_011666.1 2573523 2575481 D TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: bja:bll3590 hypothetical protein; type VI secretion protein 2573523..2575481 Methylocella silvestris BL2 7090348 YP_002362657.1 CDS Msil_2365 NC_011666.1 2575478 2576527 D TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: bja:bll3588 hypothetical protein; type VI secretion protein 2575478..2576527 Methylocella silvestris BL2 7090349 YP_002362658.1 CDS Msil_2366 NC_011666.1 2576520 2579234 D KEGG: bja:bll3587 ATP-dependent Clp protease ATP-binding subunit; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; type VI secretion ATPase, ClpV1 family 2576520..2579234 Methylocella silvestris BL2 7090350 YP_002362659.1 CDS Msil_2367 NC_011666.1 2579367 2580191 D hypothetical protein 2579367..2580191 Methylocella silvestris BL2 7090351 YP_002362660.1 CDS Msil_2368 NC_011666.1 2580213 2580776 R KEGG: bja:bll3586 hypothetical protein; hypothetical protein complement(2580213..2580776) Methylocella silvestris BL2 7090352 YP_002362661.1 CDS Msil_2369 NC_011666.1 2580901 2581659 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1668 methyltransferase type 12; type 12 methyltransferase complement(2580901..2581659) Methylocella silvestris BL2 7090353 YP_002362662.1 CDS Msil_2370 NC_011666.1 2581758 2582384 R KEGG: rle:pRL110589 putative exported protease/peptidase; putative exported protease/peptidase complement(2581758..2582384) Methylocella silvestris BL2 7090354 YP_002362663.1 CDS Msil_2371 NC_011666.1 2582419 2584104 R PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: bja:blr3608 hypothetical protein; peptidase C14 caspase catalytic subunit p20 complement(2582419..2584104) Methylocella silvestris BL2 7090355 YP_002362664.1 CDS Msil_2372 NC_011666.1 2584106 2585083 R PFAM: OmpA/MotB domain protein; KEGG: rle:pRL110591 putative outer membrane protein; OmpA/MotB domain-containing protein complement(2584106..2585083) Methylocella silvestris BL2 7090356 YP_002362665.1 CDS Msil_2373 NC_011666.1 2585296 2585586 D PFAM: PAAR repeat-containing protein; KEGG: cja:CJA_3676 PaaR motif family; PAAR repeat-containing protein 2585296..2585586 Methylocella silvestris BL2 7090357 YP_002362666.1 CDS Msil_2374 NC_011666.1 2585631 2586668 D KEGG: bja:bll3605 hypothetical protein; hypothetical protein 2585631..2586668 Methylocella silvestris BL2 7090358 YP_002362667.1 CDS Msil_2375 NC_011666.1 2586806 2587348 D hypothetical protein 2586806..2587348 Methylocella silvestris BL2 7090359 YP_002362668.1 CDS Msil_2376 NC_011666.1 2587345 2587992 D hypothetical protein 2587345..2587992 Methylocella silvestris BL2 7093765 YP_002362669.1 CDS Msil_2377 NC_011666.1 2588171 2588689 D hypothetical protein 2588171..2588689 Methylocella silvestris BL2 7093929 YP_002362670.1 CDS Msil_2378 NC_011666.1 2588792 2590459 D KEGG: bja:blr3607 hypothetical protein; hypothetical protein 2588792..2590459 Methylocella silvestris BL2 7093930 YP_002362671.1 CDS Msil_2379 NC_011666.1 2590618 2592327 D PFAM: Carboxylesterase type B; KEGG: sma:SAV433 carboxylesterase; carboxylesterase type B 2590618..2592327 Methylocella silvestris BL2 7093931 YP_002362672.1 CDS Msil_2380 NC_011666.1 2592413 2593435 R PFAM: GumN family protein; KEGG: met:M446_6668 GumN family protein; GumN family protein complement(2592413..2593435) Methylocella silvestris BL2 7093932 YP_002362673.1 CDS Msil_2381 NC_011666.1 2593443 2595035 R KEGG: met:M446_6667 hypothetical protein; hypothetical protein complement(2593443..2595035) Methylocella silvestris BL2 7093933 YP_002362674.1 CDS Msil_2382 NC_011666.1 2595276 2597612 D PFAM: TPR repeat-containing protein; peptidase C14 caspase catalytic subunit p20; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: met:M446_6666 peptidase C14 caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 2595276..2597612 Methylocella silvestris BL2 7093934 YP_002362675.1 CDS Msil_2383 NC_011666.1 2597782 2598486 D PFAM: Glutathione S-transferase domain; KEGG: pol:Bpro_3007 glutathione S-transferase-like; glutathione S-transferase domain-containing protein 2597782..2598486 Methylocella silvestris BL2 7093935 YP_002362676.1 CDS Msil_2384 NC_011666.1 2598665 2599684 D TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: mca:MCA2861 GHMP family kinase; beta-ribofuranosylaminobenzene 5'-phosphate synthase 2598665..2599684 Methylocella silvestris BL2 7093936 YP_002362677.1 CDS Msil_2385 NC_011666.1 2599853 2600740 D PFAM: Methylene-tetrahydromethanopterin dehydrogenase; KEGG: gbe:GbCGDNIH1_0775 methylenetetrahydromethanopterin dehydrogenase (NAD+/NADP+); methylenetetrahydrofolate dehydrogenase 2599853..2600740 Methylocella silvestris BL2 7093937 YP_002362678.1 CDS Msil_2386 NC_011666.1 2600754 2601899 D PFAM: protein of unknown function DUF201; KEGG: mrd:Mrad2831_0529 protein of unknown function DUF201; hypothetical protein 2600754..2601899 Methylocella silvestris BL2 7093938 YP_002362679.1 CDS Msil_2387 NC_011666.1 2601896 2602864 D catalyzes the reversible formation of methenyl-H(4)methanopterin from N(5)-formyl-H(4)methanopterin; N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase 2601896..2602864 Methylocella silvestris BL2 7093939 YP_002362680.1 CDS Msil_2388 NC_011666.1 2602848 2603813 D TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; KEGG: gbe:GbCGDNIH1_0772 ribosomal protein S6 modification protein; alpha-L-glutamate ligase 2602848..2603813 Methylocella silvestris BL2 7093940 YP_002362681.1 CDS Msil_2389 NC_011666.1 2603810 2604742 D PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: met:M446_5782 triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA protein 2603810..2604742 Methylocella silvestris BL2 7093941 YP_002362682.1 CDS Msil_2390 NC_011666.1 2604876 2605403 D TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mpt:Mpe_A2612 formaldehyde-activating enzyme; formaldehyde-activating protein 2604876..2605403 Methylocella silvestris BL2 7093942 YP_002362683.1 CDS Msil_2391 NC_011666.1 2605662 2606375 R PFAM: histidine biosynthesis protein; KEGG: gbe:GbCGDNIH1_0769 phosphoribosylformimino-5-aminoimidazole carboxamide isomerase family protein; histidine biosynthesis protein complement(2605662..2606375) Methylocella silvestris BL2 7093943 YP_002362684.1 CDS Msil_2392 NC_011666.1 2606475 2607512 D TIGRFAM: H4MPT-linked C1 transfer pathway protein; PFAM: Hydantoinase/oxoprolinase; KEGG: mrd:Mrad2831_0965 H4MPT-linked C1 transfer pathway protein; H4MPT-linked C1 transfer pathway protein 2606475..2607512 Methylocella silvestris BL2 7093944 YP_002362685.1 CDS Msil_2393 NC_011666.1 2607497 2608054 R PFAM: protein of unknown function DUF447; KEGG: gbe:GbCGDNIH1_0766 hypothetical protein; hypothetical protein complement(2607497..2608054) Methylocella silvestris BL2 7093945 YP_002362686.1 CDS Msil_2394 NC_011666.1 2608086 2609480 R PFAM: dihydropteroate synthase DHPS; KEGG: met:M446_5017 dihydropteroate synthase DhpS; dihydropteroate synthase DHPS complement(2608086..2609480) Methylocella silvestris BL2 7093946 YP_002362687.1 CDS Msil_2395 NC_011666.1 2609524 2610165 R PFAM: aspartate/glutamate/uridylate kinase; KEGG: mpo:Mpop_1794 aspartate/glutamate/uridylate kinase; aspartate/glutamate/uridylate kinase complement(2609524..2610165) Methylocella silvestris BL2 7093947 YP_002362688.1 CDS Msil_2396 NC_011666.1 2610162 2611352 R PFAM: dihydroneopterin aldolase; protein of unknown function DUF556; KEGG: gbe:GbCGDNIH1_0762 dihydroneopterin aldolase; hypothetical protein complement(2610162..2611352) Methylocella silvestris BL2 7093948 YP_002362689.1 CDS Msil_2397 NC_011666.1 2611565 2612149 R TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: mpo:Mpop_4378 glutamine amidotransferase of anthranilate synthase; glutamine amidotransferase of anthranilate synthase complement(2611565..2612149) Methylocella silvestris BL2 7093949 YP_002362690.1 CDS Msil_2398 NC_011666.1 2612146 2613519 R TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: mrd:Mrad2831_1638 para-aminobenzoate synthase, subunit I; para-aminobenzoate synthase subunit I complement(2612146..2613519) Methylocella silvestris BL2 7093950 YP_002362691.1 CDS Msil_2399 NC_011666.1 2613684 2613878 R KEGG: cjk:jk1283 putative polyhydroxybutyrate depolymerase; putative polyhydroxybutyrate depolymerase complement(2613684..2613878) Methylocella silvestris BL2 7093951 YP_002362692.1 CDS Msil_2400 NC_011666.1 2614435 2615544 D KEGG: gbe:GbCGDNIH1_0778 tungsten-containing formylmethanofuran dehydrogenase, subunit B; tungsten-containing formylmethanofuran dehydrogenase subunit B 2614435..2615544 Methylocella silvestris BL2 7093952 YP_002362693.1 CDS Msil_2401 NC_011666.1 2615544 2617172 D TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3; KEGG: gbe:GbCGDNIH1_0779 tungsten-containing formylmethanofuran dehydrogenase, subunit A; formylmethanofuran dehydrogenase subunit A 2615544..2617172 Methylocella silvestris BL2 7093953 YP_002362694.1 CDS Msil_2402 NC_011666.1 2617160 2618068 D catalyzes the transfer of a formyl group from formylmethanofuran to tetrahydromethanopterin tetrahydromethanopterin; formylmethanofuran--tetrahydromethanopterin formyltransferase 2617160..2618068 Methylocella silvestris BL2 7093954 YP_002362695.1 CDS Msil_2403 NC_011666.1 2618065 2618871 D TIGRFAM: formylmethanofuran dehydrogenase subunit C; PFAM: glutamate synthase alpha subunit domain protein; KEGG: gbe:GbCGDNIH1_0781 tungsten-containing formylmethanofuran dehydrogenase, subunit C; formylmethanofuran dehydrogenase subunit C 2618065..2618871 Methylocella silvestris BL2 7093955 YP_002362696.1 CDS Msil_2404 NC_011666.1 2618882 2619733 R KEGG: bja:bll3582 hypothetical protein; hypothetical protein complement(2618882..2619733) Methylocella silvestris BL2 7093956 YP_002362697.1 CDS Msil_2405 NC_011666.1 2619917 2621308 R hypothetical protein complement(2619917..2621308) Methylocella silvestris BL2 7093957 YP_002362698.1 CDS Msil_2406 NC_011666.1 2621679 2622062 R PFAM: transcriptional coactivator/pterin dehydratase; KEGG: bph:Bphy_6480 transcriptional coactivator/pterin dehydratase; transcriptional coactivator/pterin dehydratase complement(2621679..2622062) Methylocella silvestris BL2 7093958 YP_002362699.1 CDS Msil_2407 NC_011666.1 2622274 2623209 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cak:Caul_4410 ABC transporter related; ABC transporter-like protein 2622274..2623209 Methylocella silvestris BL2 7093959 YP_002362700.1 CDS Msil_2408 NC_011666.1 2623206 2623967 D PFAM: ABC-2 type transporter; KEGG: bbr:BB3319 putative ABC transporter inner membrane subunit; ABC-2 type transporter 2623206..2623967 Methylocella silvestris BL2 7093960 YP_002362701.1 CDS Msil_2409 NC_011666.1 2624048 2625355 D PFAM: Chloride channel core; KEGG: gdi:GDI2782 putative H(+)/Cl(-) exchange transporter; chloride channel protein 2624048..2625355 Methylocella silvestris BL2 7093961 YP_002362702.1 CDS Msil_2410 NC_011666.1 2625374 2626675 R PFAM: natural resistance-associated macrophage protein; KEGG: nar:Saro_0697 natural resistance-associated macrophage protein; natural resistance-associated macrophage protein complement(2625374..2626675) Methylocella silvestris BL2 7093962 YP_002362703.1 CDS Msil_2411 NC_011666.1 2626829 2628142 D hypothetical protein 2626829..2628142 Methylocella silvestris BL2 7093963 YP_002362704.1 CDS Msil_2412 NC_011666.1 2628150 2628974 R PFAM: Ethanolamine ammonia-lyase light chain; KEGG: pfo:PflO1_4992 ethanolamine ammonia-lyase small subunit; ethanolamine ammonia-lyase complement(2628150..2628974) Methylocella silvestris BL2 7093964 YP_002362705.1 CDS Msil_2413 NC_011666.1 2629000 2630388 R PFAM: Ethanolamine ammonia lyase large subunit; KEGG: pap:PSPA7_1082 ethanolamine ammonia-lyase large subunit; Ethanolamine ammonia lyase large subunit complement(2629000..2630388) Methylocella silvestris BL2 7093965 YP_002362706.1 CDS Msil_2414 NC_011666.1 2630423 2631856 R TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: bpy:Bphyt_0020 ethanolamine transproter; ethanolamine transporter complement(2630423..2631856) Methylocella silvestris BL2 7093966 YP_002362707.1 CDS Msil_2415 NC_011666.1 2631952 2632419 R KEGG: acr:Acry_1435 hypothetical protein; hypothetical protein complement(2631952..2632419) Methylocella silvestris BL2 7093967 YP_002362708.1 CDS Msil_2416 NC_011666.1 2632728 2634173 D KEGG: ddgr:GH10507-PA.; hypothetical protein 2632728..2634173 Methylocella silvestris BL2 7093968 YP_002362709.1 CDS Msil_2417 NC_011666.1 2634418 2636712 D KEGG: esa:ESA_02347 hypothetical protein; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; oxidoreductase alpha (molybdopterin) subunit 2634418..2636712 Methylocella silvestris BL2 7093969 YP_002362710.1 CDS Msil_2418 NC_011666.1 2636795 2638033 D PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: reh:H16_B2569 putative MFS transporter; major facilitator superfamily protein 2636795..2638033 Methylocella silvestris BL2 7093970 YP_002362711.1 CDS Msil_2419 NC_011666.1 2638137 2639081 D KEGG: nmu:Nmul_A2073 serine O-acetyltransferase; Serine O-acetyltransferase 2638137..2639081 Methylocella silvestris BL2 7093971 YP_002362712.1 CDS Msil_2420 NC_011666.1 2639216 2640169 D PFAM: Auxin Efflux Carrier; KEGG: acr:Acry_2889 auxin efflux carrier; auxin efflux carrier 2639216..2640169 Methylocella silvestris BL2 7093972 YP_002362713.1 CDS Msil_2421 NC_011666.1 2640226 2641194 D TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: bbt:BBta_0881 putative metal ion transporter; magnesium and cobalt transport protein CorA 2640226..2641194 Methylocella silvestris BL2 7093973 YP_002362714.1 CDS Msil_2422 NC_011666.1 2641318 2641527 R KEGG: bpy:Bphyt_4764 hypothetical protein; hypothetical protein complement(2641318..2641527) Methylocella silvestris BL2 7093974 YP_002362715.1 CDS Msil_2424 NC_011666.1 2641872 2642270 R PFAM: PilT protein domain protein; KEGG: cak:Caul_4476 PilT protein domain protein; PilT protein domain-containing protein complement(2641872..2642270) Methylocella silvestris BL2 7093976 YP_002362716.1 CDS Msil_2425 NC_011666.1 2642267 2642506 R KEGG: nha:Nham_4578 Rv0623-like transcription factor; protein transcription factor complement(2642267..2642506) Methylocella silvestris BL2 7093977 YP_002362717.1 CDS Msil_2426 NC_011666.1 2642557 2644293 R hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta complement(2642557..2644293) Methylocella silvestris BL2 7093978 YP_002362718.1 CDS Msil_2427 NC_011666.1 2644306 2646132 R TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: bpt:Bpet3048 putative sulfite reductase (NADPH) flavoprotein alpha-component; sulfite reductase (NADPH) flavoprotein, alpha chain complement(2644306..2646132) Methylocella silvestris BL2 7093979 YP_002362719.1 CDS Msil_2428 NC_011666.1 2646578 2648332 D TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: bid:Bind_0561 L-lactate transport; L-lactate transport protein 2646578..2648332 Methylocella silvestris BL2 7093980 YP_002362720.1 CDS Msil_2429 NC_011666.1 2648336 2649082 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bid:Bind_0560 protein of unknown function DUF224 cysteine-rich region domain protein; hypothetical protein 2648336..2649082 Methylocella silvestris BL2 7093981 YP_002362721.1 CDS Msil_2430 NC_011666.1 2649082 2650527 D PFAM: protein of unknown function DUF162; KEGG: bid:Bind_0559 protein of unknown function DUF162; hypothetical protein 2649082..2650527 Methylocella silvestris BL2 7093982 YP_002362722.1 CDS Msil_2431 NC_011666.1 2650524 2651186 D PFAM: protein of unknown function DUF162; KEGG: bid:Bind_0558 protein of unknown function DUF162; hypothetical protein 2650524..2651186 Methylocella silvestris BL2 7093983 YP_002362723.1 CDS Msil_2432 NC_011666.1 2651190 2651852 R PFAM: regulatory protein TetR; KEGG: bid:Bind_2027 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2651190..2651852) Methylocella silvestris BL2 7093984 YP_002362724.1 CDS Msil_2433 NC_011666.1 2651985 2653172 D PFAM: secretion protein HlyD family protein; KEGG: bid:Bind_2026 secretion protein HlyD family protein; secretion protein HlyD family protein 2651985..2653172 Methylocella silvestris BL2 7093985 YP_002362725.1 CDS Msil_2434 NC_011666.1 2653169 2654746 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bid:Bind_2025 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 2653169..2654746 Methylocella silvestris BL2 7093986 YP_002362726.1 CDS Msil_2435 NC_011666.1 2654853 2656355 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bid:Bind_2024 RND efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein 2654853..2656355 Methylocella silvestris BL2 7093987 YP_002362727.1 CDS Msil_2436 NC_011666.1 2656466 2656918 R KEGG: cak:Caul_3868 PpiC-type peptidyl-prolyl cis-trans isomerase; hypothetical protein complement(2656466..2656918) Methylocella silvestris BL2 7093988 YP_002362728.1 CDS Msil_2437 NC_011666.1 2657012 2657668 D PFAM: phosphoglycerate mutase; KEGG: eba:ebA1038 phosphoglycerate mutase 2; phosphoglycerate mutase 2657012..2657668 Methylocella silvestris BL2 7093989 YP_002362729.1 CDS Msil_2438 NC_011666.1 2657678 2658172 R KEGG: azc:AZC_0448 hypothetical protein; hypothetical protein complement(2657678..2658172) Methylocella silvestris BL2 7093990 YP_002362730.1 CDS Msil_2439 NC_011666.1 2658184 2659182 R TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gsu:GSU0573 alcohol dehydrogenase, zinc-containing; zinc-binding alcohol dehydrogenase family protein complement(2658184..2659182) Methylocella silvestris BL2 7093991 YP_002362731.1 CDS Msil_2440 NC_011666.1 2659206 2660735 R PFAM: cyclic nucleotide-binding; MscS Mechanosensitive ion channel; KEGG: bid:Bind_1178 cyclic nucleotide-regulated small mechanosensitive ion channel; cyclic nucleotide-regulated small mechanosensitive ion channel complement(2659206..2660735) Methylocella silvestris BL2 7093992 YP_002362732.1 CDS Msil_2441 NC_011666.1 2660829 2661086 R KEGG: bbt:BBta_1417 hypothetical protein; hypothetical protein complement(2660829..2661086) Methylocella silvestris BL2 7093993 YP_002362733.1 CDS Msil_2442 NC_011666.1 2661241 2661648 R PFAM: protein of unknown function DUF336; KEGG: nmu:Nmul_A0738 protein of unknown function DUF336; hypothetical protein complement(2661241..2661648) Methylocella silvestris BL2 7093994 YP_002362734.1 CDS Msil_2443 NC_011666.1 2661808 2662521 R PFAM: regulatory protein TetR; KEGG: pla:Plav_0533 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2661808..2662521) Methylocella silvestris BL2 7093995 YP_002362735.1 CDS Msil_2444 NC_011666.1 2662606 2665827 D PFAM: acriflavin resistance protein; KEGG: bja:bll0301 cation efflux protein; acriflavin resistance protein 2662606..2665827 Methylocella silvestris BL2 7093996 YP_002362736.1 CDS Msil_2445 NC_011666.1 2665824 2667098 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mrd:Mrad2831_0225 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2665824..2667098 Methylocella silvestris BL2 7093997 YP_002362737.1 CDS Msil_2446 NC_011666.1 2667137 2668165 D PFAM: aldo/keto reductase; KEGG: bsu:BSU09530 hypothetical protein; aldo/keto reductase 2667137..2668165 Methylocella silvestris BL2 7093998 YP_002362738.1 CDS Msil_2447 NC_011666.1 2668493 2669521 D KEGG: csa:Csal_0183 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic components-like protein 2668493..2669521 Methylocella silvestris BL2 7093999 YP_002362739.1 CDS Msil_2448 NC_011666.1 2669518 2670330 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpo:Mpop_4265 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2669518..2670330 Methylocella silvestris BL2 7094000 YP_002362740.1 CDS Msil_2449 NC_011666.1 2670318 2671085 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpo:Mpop_4264 ABC transporter related; ABC transporter-like protein 2670318..2671085 Methylocella silvestris BL2 7094001 YP_002362741.1 CDS Msil_2450 NC_011666.1 2671082 2673457 D KEGG: mex:Mext_3337 hypothetical protein; hypothetical protein 2671082..2673457 Methylocella silvestris BL2 7094002 YP_002362742.1 CDS Msil_2451 NC_011666.1 2673521 2674726 R Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen, nitrate, sulphate or fumarate; formate dehydrogenase complement(2673521..2674726) Methylocella silvestris BL2 7094003 YP_002362743.1 CDS Msil_2452 NC_011666.1 2674979 2675890 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpo:Mpop_3700 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2674979..2675890) Methylocella silvestris BL2 7094004 YP_002362744.1 CDS Msil_2453 NC_011666.1 2676077 2676553 D PFAM: glutathione peroxidase; KEGG: pzu:PHZ_c1981 glutathione peroxidase; glutathione peroxidase 2676077..2676553 Methylocella silvestris BL2 7094005 YP_002362745.1 CDS Msil_2454 NC_011666.1 2676563 2676769 R PFAM: protein of unknown function DUF1458; KEGG: hha:Hhal_0546 protein of unknown function DUF1458; hypothetical protein complement(2676563..2676769) Methylocella silvestris BL2 7094006 YP_002362746.1 CDS Msil_2455 NC_011666.1 2676884 2678668 R PFAM: cyclic nucleotide-binding; Patatin; KEGG: jan:Jann_0922 cyclic nucleotide-binding domain-containing protein; cyclic nucleotide-binding protein complement(2676884..2678668) Methylocella silvestris BL2 7094007 YP_002362747.1 CDS Msil_2456 NC_011666.1 2678842 2682072 D KEGG: rle:pRL110527 hypothetical protein; hypothetical protein 2678842..2682072 Methylocella silvestris BL2 7094008 YP_002362748.1 CDS Msil_2457 NC_011666.1 2682206 2683243 D KEGG: bja:bll5593 hypothetical protein; hypothetical protein 2682206..2683243 Methylocella silvestris BL2 7094009 YP_002362749.1 CDS Msil_2458 NC_011666.1 2683300 2683722 R PFAM: YCII-related; KEGG: bmj:BMULJ_04986 hypothetical protein; YciI-like protein complement(2683300..2683722) Methylocella silvestris BL2 7092784 YP_002362750.1 CDS Msil_2459 NC_011666.1 2683841 2684470 R PFAM: helix-turn-helix HxlR type; KEGG: reu:Reut_A0235 hypothetical protein; HxlR family transcriptional regulator complement(2683841..2684470) Methylocella silvestris BL2 7091011 YP_002362751.1 CDS Msil_2460 NC_011666.1 2684544 2686739 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: pmy:Pmen_2199 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase complement(2684544..2686739) Methylocella silvestris BL2 7091012 YP_002362752.1 CDS Msil_2461 NC_011666.1 2686743 2687222 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: pmy:Pmen_2198 (2Fe-2S)-binding domain protein; (2Fe-2S)-binding domain-containing protein complement(2686743..2687222) Methylocella silvestris BL2 7091013 YP_002362753.1 CDS Msil_2462 NC_011666.1 2687540 2687836 R hypothetical protein complement(2687540..2687836) Methylocella silvestris BL2 7091014 YP_002362754.1 CDS Msil_2463 NC_011666.1 2687922 2691158 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bra:BRADO4411 AcrB/AcrD/AcrF family mulitdrug efflux protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(2687922..2691158) Methylocella silvestris BL2 7091015 YP_002362755.1 CDS Msil_2464 NC_011666.1 2691296 2692468 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bra:BRADO4412 AcrB/AcrD/AcrF family mulitdrug efflux protein; RND family efflux transporter MFP subunit complement(2691296..2692468) Methylocella silvestris BL2 7091016 YP_002362756.1 CDS Msil_2465 NC_011666.1 2692914 2694371 D PFAM: Catalase domain protein; KEGG: gbe:GbCGDNIH1_1969 catalase; catalase 2692914..2694371 Methylocella silvestris BL2 7091017 YP_002362757.1 CDS Msil_2466 NC_011666.1 2694435 2695730 R KEGG: met:M446_1389 hypothetical protein; hypothetical protein complement(2694435..2695730) Methylocella silvestris BL2 7091018 YP_002362758.1 CDS Msil_2467 NC_011666.1 2695723 2696544 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mpo:Mpop_0793 tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(2695723..2696544) Methylocella silvestris BL2 7091019 YP_002362759.1 CDS Msil_2468 NC_011666.1 2696541 2697470 R KEGG: met:M446_1387 von Willebrand factor type A; von Willebrand factor type A complement(2696541..2697470) Methylocella silvestris BL2 7091020 YP_002362760.1 CDS Msil_2469 NC_011666.1 2697467 2698444 R PFAM: von Willebrand factor type A; KEGG: mrd:Mrad2831_4305 von Willebrand factor type A; von Willebrand factor type A complement(2697467..2698444) Methylocella silvestris BL2 7091021 YP_002362761.1 CDS Msil_2470 NC_011666.1 2698441 2698932 R KEGG: mex:Mext_0864 hypothetical protein; hypothetical protein complement(2698441..2698932) Methylocella silvestris BL2 7091022 YP_002362762.1 CDS Msil_2471 NC_011666.1 2698925 2699884 R PFAM: protein of unknown function DUF58; KEGG: met:M446_1384 hypothetical protein; hypothetical protein complement(2698925..2699884) Methylocella silvestris BL2 7091023 YP_002362763.1 CDS Msil_2472 NC_011666.1 2699893 2700900 R PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: met:M446_1383 ATPase associated with various cellular activities AAA_3; ATPase complement(2699893..2700900) Methylocella silvestris BL2 7091024 YP_002362764.1 CDS Msil_2473 NC_011666.1 2701193 2706571 D PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: met:M446_5171 GAF sensor hybrid histidine kinase; GAF sensor hybrid histidine kinase 2701193..2706571 Methylocella silvestris BL2 7091025 YP_002362765.1 CDS Msil_2474 NC_011666.1 2706581 2708260 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rle:pRL120719 two-component histidine kinase/response regulator motif-containing protein; histidine kinase 2706581..2708260 Methylocella silvestris BL2 7091026 YP_002362766.1 CDS Msil_2476 NC_011666.1 2709557 2710108 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: lbc:LACBIDRAFT_181724 hypothetical protein Pfam: Mga Hydrolase; HAD-superfamily hydrolase complement(2709557..2710108) Methylocella silvestris BL2 7091028 YP_002362767.1 CDS Msil_2477 NC_011666.1 2710227 2711546 D PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: nha:Nham_4594 protein of unknown function DUF21; hypothetical protein 2710227..2711546 Methylocella silvestris BL2 7091029 YP_002362768.1 CDS Msil_2478 NC_011666.1 2711664 2712701 D PFAM: alpha/beta hydrolase fold; KEGG: bid:Bind_1300 alpha/beta hydrolase fold; hypothetical protein 2711664..2712701 Methylocella silvestris BL2 7091030 YP_002362769.1 CDS Msil_2479 NC_011666.1 2712763 2713413 D PFAM: protein of unknown function DUF938; KEGG: bid:Bind_1301 protein of unknown function DUF938; hypothetical protein 2712763..2713413 Methylocella silvestris BL2 7091031 YP_002362770.1 CDS Msil_2480 NC_011666.1 2713445 2714185 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_C0125 putative short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2713445..2714185 Methylocella silvestris BL2 7091032 YP_002362771.1 CDS Msil_2481 NC_011666.1 2714225 2714599 D KEGG: bid:Bind_1299 hypothetical protein; hypothetical protein 2714225..2714599 Methylocella silvestris BL2 7091033 YP_002362772.1 CDS Msil_2482 NC_011666.1 2715045 2716073 R hypothetical protein complement(2715045..2716073) Methylocella silvestris BL2 7091034 YP_002362773.1 CDS Msil_2483 NC_011666.1 2716167 2717366 R PFAM: glycosyl transferase group 1; KEGG: mva:Mvan_1696 glycosyl transferase, group 1; group 1 glycosyl transferase complement(2716167..2717366) Methylocella silvestris BL2 7091035 YP_002362774.1 CDS Msil_2484 NC_011666.1 2717851 2719143 D KEGG: bvu:BVU_1724 putative LPS biosynthesis related polysaccharide transporter/flippase; hypothetical protein 2717851..2719143 Methylocella silvestris BL2 7091036 YP_002362775.1 CDS Msil_2485 NC_011666.1 2719494 2720489 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bid:Bind_0511 glyoxylate reductase; glyoxylate reductase complement(2719494..2720489) Methylocella silvestris BL2 7091037 YP_002362776.1 CDS Msil_2486 NC_011666.1 2720863 2721396 D PFAM: protein of unknown function DUF1058; SMART: SH3 domain protein; KEGG: bid:Bind_0510 protein of unknown function DUF1058; hypothetical protein 2720863..2721396 Methylocella silvestris BL2 7091038 YP_002362777.1 CDS Msil_2487 NC_011666.1 2721403 2721609 R KEGG: rpe:RPE_0791 hypothetical protein; hypothetical protein complement(2721403..2721609) Methylocella silvestris BL2 7091039 YP_002362778.1 CDS Msil_2488 NC_011666.1 2721861 2722121 D hypothetical protein 2721861..2722121 Methylocella silvestris BL2 7091040 YP_002362779.1 CDS Msil_2489 NC_011666.1 2722165 2722440 D KEGG: bid:Bind_0239 hypothetical protein; hypothetical protein 2722165..2722440 Methylocella silvestris BL2 7091041 YP_002362780.1 CDS Msil_2490 NC_011666.1 2722775 2723758 D KEGG: bid:Bind_3017 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 2722775..2723758 Methylocella silvestris BL2 7091042 YP_002362781.1 CDS Msil_2491 NC_011666.1 2723776 2724525 R PFAM: protein of unknown function DUF81; KEGG: mlo:mlr1193 hypothetical protein; hypothetical protein complement(2723776..2724525) Methylocella silvestris BL2 7091043 YP_002362782.1 CDS Msil_2492 NC_011666.1 2724628 2725341 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bid:Bind_0324 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(2724628..2725341) Methylocella silvestris BL2 7091044 YP_002362783.1 CDS Msil_2495 NC_011666.1 2726440 2726895 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: xau:Xaut_0130 Rieske (2Fe-2S) domain-containing protein; Rieske (2Fe-2S) domain-containing protein complement(2726440..2726895) Methylocella silvestris BL2 7091046 YP_002362784.1 CDS Msil_2496 NC_011666.1 2727125 2727409 D KEGG: xau:Xaut_0128 hypothetical protein; hypothetical protein 2727125..2727409 Methylocella silvestris BL2 7091047 YP_002362785.1 CDS Msil_2497 NC_011666.1 2727566 2727970 R KEGG: bra:BRADO3269 hypothetical protein; hypothetical protein complement(2727566..2727970) Methylocella silvestris BL2 7091048 YP_002362786.1 CDS Msil_2498 NC_011666.1 2728000 2728461 R PFAM: regulatory protein MarR; Penicillinase repressor; KEGG: mag:amb3416 transcriptional regulator; MarR family transcriptional regulator complement(2728000..2728461) Methylocella silvestris BL2 7091049 YP_002362787.1 CDS Msil_2499 NC_011666.1 2728973 2729854 R KEGG: bid:Bind_3601 hypothetical protein; hypothetical protein complement(2728973..2729854) Methylocella silvestris BL2 7091050 YP_002362788.1 CDS Msil_2500 NC_011666.1 2730208 2731395 D PFAM: AFG1-family ATPase; KEGG: bid:Bind_3602 AFG1-family ATPase; AFG1 family ATPase 2730208..2731395 Methylocella silvestris BL2 7091051 YP_002362789.1 CDS Msil_2501 NC_011666.1 2731825 2732790 D TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase; KEGG: bid:Bind_3604 malate dehydrogenase, NAD-dependent; malate dehydrogenase 2731825..2732790 Methylocella silvestris BL2 7091052 YP_002362790.1 CDS Msil_2503 NC_011666.1 2734100 2734984 D TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: met:M446_2163 succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha 2734100..2734984 Methylocella silvestris BL2 7091054 YP_002362791.1 CDS sucA NC_011666.1 2735381 2738437 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 2735381..2738437 Methylocella silvestris BL2 7091055 YP_002362792.1 CDS Msil_2505 NC_011666.1 2738612 2739898 D TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: bid:Bind_3608 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 2738612..2739898 Methylocella silvestris BL2 7091056 YP_002362793.1 CDS Msil_2506 NC_011666.1 2740065 2741477 D TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; KEGG: bid:Bind_3609 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 2740065..2741477 Methylocella silvestris BL2 7091057 YP_002362794.1 CDS Msil_2507 NC_011666.1 2741604 2741933 D KEGG: mrd:Mrad2831_5138 hypothetical protein; hypothetical protein 2741604..2741933 Methylocella silvestris BL2 7091058 YP_002362795.1 CDS Msil_2508 NC_011666.1 2742291 2743208 R KEGG: mes:Meso_2591 glycosyl transferase, family 2; family 2 glycosyl transferase complement(2742291..2743208) Methylocella silvestris BL2 7091059 YP_002362796.1 CDS Msil_2509 NC_011666.1 2743449 2744336 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(2743449..2744336) Methylocella silvestris BL2 7091060 YP_002362797.1 CDS Msil_2510 NC_011666.1 2744692 2745231 D PFAM: regulatory protein MarR; KEGG: rpb:RPB_4174 transcriptional regulator, MarR family; MarR family transcriptional regulator 2744692..2745231 Methylocella silvestris BL2 7091061 YP_002362798.1 CDS Msil_2511 NC_011666.1 2745228 2745962 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bid:Bind_3546 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 2745228..2745962 Methylocella silvestris BL2 7091062 YP_002362799.1 CDS Msil_2512 NC_011666.1 2746071 2747432 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bid:Bind_3547 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2746071..2747432 Methylocella silvestris BL2 7091063 YP_002362800.1 CDS Msil_2513 NC_011666.1 2747475 2747972 R KEGG: bid:Bind_2331 protozoan/cyanobacterial globin family protein; globin family protein complement(2747475..2747972) Methylocella silvestris BL2 7091064 YP_002362801.1 CDS Msil_2514 NC_011666.1 2748292 2748762 D PFAM: Domain of unknown function DUF1801; KEGG: sus:Acid_5225 hypothetical protein; hypothetical protein 2748292..2748762 Methylocella silvestris BL2 7091065 YP_002362802.1 CDS Msil_2515 NC_011666.1 2749153 2750031 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rfr:Rfer_3626 diguanylate cyclase with PAS/PAC sensor; diguanylate cyclase 2749153..2750031 Methylocella silvestris BL2 7091066 YP_002362803.1 CDS Msil_2516 NC_011666.1 2750726 2751625 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rfr:Rfer_3626 diguanylate cyclase with PAS/PAC sensor; diguanylate cyclase 2750726..2751625 Methylocella silvestris BL2 7091067 YP_002362804.1 CDS Msil_2517 NC_011666.1 2751662 2752711 R KEGG: bid:Bind_0363 protein of unknown function DUF214; hypothetical protein complement(2751662..2752711) Methylocella silvestris BL2 7091068 YP_002362805.1 CDS Msil_2518 NC_011666.1 2752780 2753442 R KEGG: bid:Bind_0362 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE complement(2752780..2753442) Methylocella silvestris BL2 7091069 YP_002362806.1 CDS Msil_2519 NC_011666.1 2753660 2754061 R PFAM: NUDIX hydrolase; KEGG: bja:blr0207 NTP pyrophosphohydrolase; NUDIX hydrolase complement(2753660..2754061) Methylocella silvestris BL2 7091070 YP_002362807.1 CDS Msil_2520 NC_011666.1 2754058 2755296 R KEGG: bid:Bind_3659 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ complement(2754058..2755296) Methylocella silvestris BL2 7091071 YP_002362808.1 CDS Msil_2521 NC_011666.1 2755448 2756860 R KEGG: pzu:PHZ_c2369 hypothetical protein; hypothetical protein complement(2755448..2756860) Methylocella silvestris BL2 7091072 YP_002362809.1 CDS Msil_2523 NC_011666.1 2757678 2758646 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bid:Bind_3255 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(2757678..2758646) Methylocella silvestris BL2 7091074 YP_002362810.1 CDS Msil_2524 NC_011666.1 2759040 2759159 D hypothetical protein 2759040..2759159 Methylocella silvestris BL2 7091075 YP_002362811.1 CDS Msil_2525 NC_011666.1 2759162 2762011 D TIGRFAM: preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: bid:Bind_3254 preprotein translocase, SecA subunit; preprotein translocase subunit SecA 2759162..2762011 Methylocella silvestris BL2 7091076 YP_002362812.1 CDS Msil_2526 NC_011666.1 2762149 2762430 D KEGG: bra:BRADO0700 hypothetical protein; hypothetical protein 2762149..2762430 Methylocella silvestris BL2 7091077 YP_002362813.1 CDS Msil_2527 NC_011666.1 2762512 2763534 R KEGG: bid:Bind_3039 hypothetical protein; hypothetical protein complement(2762512..2763534) Methylocella silvestris BL2 7091078 YP_002362814.1 CDS Msil_2528 NC_011666.1 2763676 2764080 R KEGG: bid:Bind_0268 hypothetical protein; hypothetical protein complement(2763676..2764080) Methylocella silvestris BL2 7091079 YP_002362815.1 CDS Msil_2529 NC_011666.1 2764595 2765296 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bid:Bind_0344 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 2764595..2765296 Methylocella silvestris BL2 7091080 YP_002362816.1 CDS Msil_2530 NC_011666.1 2765536 2766219 R KEGG: bid:Bind_1019 hypothetical protein; hypothetical protein complement(2765536..2766219) Methylocella silvestris BL2 7091081 YP_002362817.1 CDS Msil_2531 NC_011666.1 2766581 2768020 D PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: bid:Bind_0048 transcriptional regulator, XRE family; XRE family transcriptional regulator 2766581..2768020 Methylocella silvestris BL2 7091082 YP_002362818.1 CDS rho NC_011666.1 2768036 2769304 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(2768036..2769304) Methylocella silvestris BL2 7091083 YP_002362819.1 CDS Msil_2533 NC_011666.1 2769550 2769975 R PFAM: conserved hypothetical protein; KEGG: bid:Bind_3568 hypothetical protein; hypothetical protein complement(2769550..2769975) Methylocella silvestris BL2 7091084 YP_002362820.1 CDS Msil_2534 NC_011666.1 2769972 2771021 R KEGG: bid:Bind_3569 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase complement(2769972..2771021) Methylocella silvestris BL2 7091085 YP_002362821.1 CDS Msil_2535 NC_011666.1 2771438 2772271 D PFAM: protein of unknown function DUF299; KEGG: bid:Bind_3570 protein of unknown function DUF299; hypothetical protein 2771438..2772271 Methylocella silvestris BL2 7091086 YP_002362822.1 CDS Msil_2536 NC_011666.1 2772268 2772885 D PFAM: Maf family protein; KEGG: bid:Bind_3571 Maf family protein; Maf family protein 2772268..2772885 Methylocella silvestris BL2 7091087 YP_002362823.1 CDS Msil_2537 NC_011666.1 2772882 2773724 D TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: bid:Bind_3572 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 2772882..2773724 Methylocella silvestris BL2 7091088 YP_002362824.1 CDS Msil_2538 NC_011666.1 2773724 2774329 D KEGG: xau:Xaut_1830 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 2773724..2774329 Methylocella silvestris BL2 7091089 YP_002362825.1 CDS Msil_2539 NC_011666.1 2774347 2775054 D KEGG: bid:Bind_3198 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 2774347..2775054 Methylocella silvestris BL2 7091090 YP_002362826.1 CDS Msil_2540 NC_011666.1 2775158 2776456 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: oan:Oant_3012 protein of unknown function DUF224 cysteine-rich region domain protein; hypothetical protein complement(2775158..2776456) Methylocella silvestris BL2 7091091 YP_002362827.1 CDS Msil_2541 NC_011666.1 2776458 2777663 R PFAM: FAD linked oxidase domain protein; KEGG: mlo:mlr6919 glycolate oxidase subunits GlcE; FAD linked oxidase domain-containing protein complement(2776458..2777663) Methylocella silvestris BL2 7090685 YP_002362828.1 CDS Msil_2542 NC_011666.1 2778102 2780414 D KEGG: sfu:Sfum_0518 hypothetical protein; hypothetical protein 2778102..2780414 Methylocella silvestris BL2 7093196 YP_002362829.1 CDS Msil_2543 NC_011666.1 2780512 2780988 R KEGG: met:M446_1028 hypothetical protein; hypothetical protein complement(2780512..2780988) Methylocella silvestris BL2 7093197 YP_002362830.1 CDS Msil_2544 NC_011666.1 2781088 2781561 R KEGG: mrd:Mrad2831_1085 hypothetical protein; hypothetical protein complement(2781088..2781561) Methylocella silvestris BL2 7093198 YP_002362831.1 CDS Msil_2545 NC_011666.1 2781865 2782233 D PFAM: protein of unknown function DUF1044; KEGG: mpo:Mpop_4311 protein of unknown function DUF1044; hypothetical protein 2781865..2782233 Methylocella silvestris BL2 7093199 YP_002362832.1 CDS Msil_2546 NC_011666.1 2782230 2782553 D PFAM: helix-turn-helix domain protein; KEGG: mpo:Mpop_4312 transcriptional regulator, XRE family; XRE family transcriptional regulator 2782230..2782553 Methylocella silvestris BL2 7093200 YP_002362833.1 CDS Msil_2547 NC_011666.1 2782550 2783626 R catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase complement(2782550..2783626) Methylocella silvestris BL2 7093201 YP_002362834.1 CDS Msil_2548 NC_011666.1 2783623 2783961 R TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: bid:Bind_0242 phosphoribosyl-ATP diphosphatase; phosphoribosyl-ATP diphosphatase complement(2783623..2783961) Methylocella silvestris BL2 7093202 YP_002362835.1 CDS Msil_2549 NC_011666.1 2783987 2784757 R TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: bid:Bind_0243 imidazoleglycerol phosphate synthase, cyclase subunit; Imidazole glycerol phosphate synthase cyclase subunit complement(2783987..2784757) Methylocella silvestris BL2 7093203 YP_002362836.1 CDS Msil_2550 NC_011666.1 2784800 2786455 R SMART: Thaumatin pathogenesis-related protein; KEGG: osa:4352858 hypothetical protein; Thaumatin pathogenesis-like protein complement(2784800..2786455) Methylocella silvestris BL2 7093204 YP_002362837.1 CDS Msil_2551 NC_011666.1 2786584 2787324 R TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: mex:Mext_2551 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase complement(2786584..2787324) Methylocella silvestris BL2 7093205 YP_002362838.1 CDS Msil_2552 NC_011666.1 2787321 2787971 R TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; KEGG: bid:Bind_0247 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit complement(2787321..2787971) Methylocella silvestris BL2 7093206 YP_002362839.1 CDS Msil_2553 NC_011666.1 2787968 2788444 R KEGG: bid:Bind_0248 hypothetical protein; hypothetical protein complement(2787968..2788444) Methylocella silvestris BL2 7093207 YP_002362840.1 CDS hisB NC_011666.1 2788677 2789270 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(2788677..2789270) Methylocella silvestris BL2 7093208 YP_002362841.1 CDS Msil_2555 NC_011666.1 2789343 2790698 R KEGG: mlo:mll6408 coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase complement(2789343..2790698) Methylocella silvestris BL2 7093209 YP_002362842.1 CDS Msil_2556 NC_011666.1 2790826 2793156 D PFAM: pentapeptide repeat protein; KEGG: rpa:RPA0769 hypothetical protein; pentapeptide repeat-containing protein 2790826..2793156 Methylocella silvestris BL2 7093210 YP_002362843.1 CDS Msil_2557 NC_011666.1 2793168 2793545 R KEGG: bvi:Bcep1808_0722 hypothetical protein; hypothetical protein complement(2793168..2793545) Methylocella silvestris BL2 7093211 YP_002362844.1 CDS Msil_2558 NC_011666.1 2793870 2794436 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 2793870..2794436 Methylocella silvestris BL2 7093212 YP_002362845.1 CDS hslU NC_011666.1 2794512 2795825 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 2794512..2795825 Methylocella silvestris BL2 7093213 YP_002362846.1 CDS Msil_2560 NC_011666.1 2795826 2796434 R PFAM: protein of unknown function DUF1470; KEGG: gvi:glr1282 hypothetical protein; hypothetical protein complement(2795826..2796434) Methylocella silvestris BL2 7093214 YP_002362847.1 CDS Msil_2561 NC_011666.1 2796571 2797440 D PFAM: alpha/beta hydrolase fold; KEGG: gvi:gll1281 hypothetical protein; alpha/beta hydrolase fold protein 2796571..2797440 Methylocella silvestris BL2 7093215 YP_002362848.1 CDS Msil_2562 NC_011666.1 2797541 2798407 D PFAM: Pirin domain protein; KEGG: nwi:Nwi_0616 pirin; Pirin domain-containing protein 2797541..2798407 Methylocella silvestris BL2 7093216 YP_002362849.1 CDS Msil_2563 NC_011666.1 2798417 2799133 R PFAM: MgtC/SapB transporter; KEGG: sml:Smlt2860 hypothetical protein; MgtC/SapB transporter complement(2798417..2799133) Methylocella silvestris BL2 7093217 YP_002362850.1 CDS Msil_2564 NC_011666.1 2799303 2800673 D TIGRFAM: acid phosphatase; PFAM: phosphoesterase; KEGG: mca:MCA2512 acid phosphatase; acid phosphatase 2799303..2800673 Methylocella silvestris BL2 7093218 YP_002362851.1 CDS Msil_2565 NC_011666.1 2800680 2801303 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mlo:mll3525 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(2800680..2801303) Methylocella silvestris BL2 7093219 YP_002362852.1 CDS Msil_2566 NC_011666.1 2801377 2801925 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: mms:mma_0922 hypothetical protein; alkylhydroperoxidase complement(2801377..2801925) Methylocella silvestris BL2 7093220 YP_002362853.1 CDS Msil_2568 NC_011666.1 2803080 2804114 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 2803080..2804114 Methylocella silvestris BL2 7093222 YP_002362854.1 CDS Msil_2569 NC_011666.1 2804122 2805576 R PFAM: Gluconate transporter; Citrate transporter; KEGG: azc:AZC_1305 putative H+/gluconate symporter; citrate transporter complement(2804122..2805576) Methylocella silvestris BL2 7093223 YP_002362855.1 CDS Msil_2570 NC_011666.1 2805875 2806225 R PFAM: regulatory protein ArsR; KEGG: aav:Aave_4718 transcriptional regulator, ArsR family; ArsR family transcriptional regulator complement(2805875..2806225) Methylocella silvestris BL2 7093224 YP_002362856.1 CDS Msil_2571 NC_011666.1 2806353 2806538 D KEGG: mpt:Mpe_A0407 hypothetical protein; hypothetical protein 2806353..2806538 Methylocella silvestris BL2 7093225 YP_002362857.1 CDS Msil_2572 NC_011666.1 2806543 2806899 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: cvi:CV_0085 hypothetical protein; alkylhydroperoxidase 2806543..2806899 Methylocella silvestris BL2 7093226 YP_002362858.1 CDS Msil_2573 NC_011666.1 2807244 2807879 R hypothetical protein complement(2807244..2807879) Methylocella silvestris BL2 7093227 YP_002362859.1 CDS Msil_2574 NC_011666.1 2808076 2809152 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: mrd:Mrad2831_4009 protein of unknown function DUF6 transmembrane; hypothetical protein complement(2808076..2809152) Methylocella silvestris BL2 7093228 YP_002362860.1 CDS Msil_2575 NC_011666.1 2809234 2809479 R KEGG: bid:Bind_1236 hypothetical protein; hypothetical protein complement(2809234..2809479) Methylocella silvestris BL2 7093229 YP_002362861.1 CDS Msil_2576 NC_011666.1 2809623 2811485 R TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: bid:Bind_0370 oligoendopeptidase, PepF/M3 family; oligoendopeptidase complement(2809623..2811485) Methylocella silvestris BL2 7093230 YP_002362862.1 CDS Msil_2577 NC_011666.1 2811704 2813251 D KEGG: rle:RL4003 hypothetical protein; hypothetical protein 2811704..2813251 Methylocella silvestris BL2 7093231 YP_002362863.1 CDS Msil_2578 NC_011666.1 2813438 2814964 D PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; KEGG: bid:Bind_0142 two component, sigma54 specific, transcriptional regulator, fis family; Fis family two component sigma-54 specific transcriptional regulator 2813438..2814964 Methylocella silvestris BL2 7093232 YP_002362864.1 CDS Msil_2579 NC_011666.1 2814961 2815269 D hypothetical protein 2814961..2815269 Methylocella silvestris BL2 7093233 YP_002362865.1 CDS Msil_2580 NC_011666.1 2815286 2817175 D PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: bid:Bind_0141 peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein 2815286..2817175 Methylocella silvestris BL2 7093234 YP_002362866.1 CDS Msil_2581 NC_011666.1 2817187 2818044 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hwa:HQ1235A probable short chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR complement(2817187..2818044) Methylocella silvestris BL2 7093235 YP_002362867.1 CDS Msil_2582 NC_011666.1 2818237 2818968 D PFAM: Integral membrane protein TerC; KEGG: mex:Mext_1566 integral membrane protein TerC; integral membrane protein TerC 2818237..2818968 Methylocella silvestris BL2 7093236 YP_002362868.1 CDS Msil_2583 NC_011666.1 2818973 2821207 D binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 2818973..2821207 Methylocella silvestris BL2 7093237 YP_002362869.1 CDS Msil_2584 NC_011666.1 2821448 2822683 D hypothetical protein 2821448..2822683 Methylocella silvestris BL2 7093238 YP_002362870.1 CDS Msil_2585 NC_011666.1 2822709 2823743 D PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: gbm:Gbem_0746 PBS lyase heat domain protein repeat-containing protein; PBS lyase HEAT domain-containing protein 2822709..2823743 Methylocella silvestris BL2 7093239 YP_002362871.1 CDS Msil_2586 NC_011666.1 2823779 2825854 R PFAM: protein of unknown function DUF255; KEGG: bid:Bind_1283 protein of unknown function DUF255; hypothetical protein complement(2823779..2825854) Methylocella silvestris BL2 7093240 YP_002362872.1 CDS trmE NC_011666.1 2825930 2827276 D in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 2825930..2827276 Methylocella silvestris BL2 7093241 YP_002362873.1 CDS Msil_2588 NC_011666.1 2827316 2829178 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 2827316..2829178 Methylocella silvestris BL2 7093242 YP_002362874.1 CDS Msil_2589 NC_011666.1 2829175 2829834 D TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: bid:Bind_1286 methyltransferase GidB; methyltransferase GidB 2829175..2829834 Methylocella silvestris BL2 7093243 YP_002362875.1 CDS Msil_2590 NC_011666.1 2829892 2830740 D PFAM: Cobyrinic acid ac-diamide synthase; KEGG: met:M446_1408 cobyrinic acid ac-diamide synthase; Cobyrinic acid ac-diamide synthase 2829892..2830740 Methylocella silvestris BL2 7093244 YP_002362876.1 CDS Msil_2591 NC_011666.1 2830846 2831730 D TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: met:M446_1407 ParB-like partition protein; parB-like partition protein 2830846..2831730 Methylocella silvestris BL2 7093245 YP_002362877.1 CDS Msil_2592 NC_011666.1 2832120 2832605 R TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: bid:Bind_0355 bacterioferritin; bacterioferritin complement(2832120..2832605) Methylocella silvestris BL2 7093246 YP_002362878.1 CDS Msil_2593 NC_011666.1 2832872 2834698 D KEGG: rpb:RPB_2161 diguanylate cyclase/phosphodiesterase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2832872..2834698 Methylocella silvestris BL2 7093247 YP_002362879.1 CDS Msil_2594 NC_011666.1 2834901 2835134 D hypothetical protein 2834901..2835134 Methylocella silvestris BL2 7093248 YP_002362880.1 CDS Msil_2595 NC_011666.1 2835286 2836479 R PFAM: Radical SAM domain protein; KEGG: mar:MAE_50540 putative arylsulfatase regulatory protein; radical SAM protein complement(2835286..2836479) Methylocella silvestris BL2 7093249 YP_002362881.1 CDS Msil_2596 NC_011666.1 2836505 2836921 R KEGG: pmf:P9303_04241 hypothetical protein; hypothetical protein complement(2836505..2836921) Methylocella silvestris BL2 7093250 YP_002362882.1 CDS Msil_2597 NC_011666.1 2837281 2837634 R PFAM: protein of unknown function DUF1428; KEGG: mlo:mlr2642 hypothetical protein; hypothetical protein complement(2837281..2837634) Methylocella silvestris BL2 7093251 YP_002362883.1 CDS Msil_2598 NC_011666.1 2837844 2838731 R PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mva:Mvan_5187 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase complement(2837844..2838731) Methylocella silvestris BL2 7093252 YP_002362884.1 CDS Msil_2599 NC_011666.1 2838786 2839166 R PFAM: protein of unknown function DUF805; KEGG: swd:Swoo_3739 protein of unknown function DUF805; hypothetical protein complement(2838786..2839166) Methylocella silvestris BL2 7093253 YP_002362885.1 CDS Msil_2600 NC_011666.1 2839190 2840125 R KEGG: rme:Rmet_5770 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase complement(2839190..2840125) Methylocella silvestris BL2 7093254 YP_002362886.1 CDS Msil_2601 NC_011666.1 2840607 2841680 D TIGRFAM: ABC transporter periplasmic binding protein, urea carboxylase region; KEGG: azc:AZC_4397 putative taurine transport system protein; ABC transporter periplasmic binding protein, urea carboxylase region 2840607..2841680 Methylocella silvestris BL2 7093255 YP_002362887.1 CDS Msil_2602 NC_011666.1 2841687 2842505 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_4398 putative ABC-type nitrate/sulfonate/bicarbonate transport permease; binding-protein-dependent transport system inner membrane protein 2841687..2842505 Methylocella silvestris BL2 7093256 YP_002362888.1 CDS Msil_2603 NC_011666.1 2842502 2843272 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_4534 ABC transporter related; ABC transporter-like protein 2842502..2843272 Methylocella silvestris BL2 7093257 YP_002362889.1 CDS Msil_2604 NC_011666.1 2843356 2844168 D TIGRFAM: urea carboxylase-associated protein 2; KEGG: rpe:RPE_1217 hypothetical protein; urea carboxylase-associated protein 2 2843356..2844168 Methylocella silvestris BL2 7093258 YP_002362890.1 CDS Msil_2605 NC_011666.1 2844192 2844836 D TIGRFAM: urea carboxylase-associated protein 1; KEGG: xau:Xaut_1223 hypothetical protein; urea carboxylase-associated protein 1 2844192..2844836 Methylocella silvestris BL2 7093259 YP_002362891.1 CDS Msil_2606 NC_011666.1 2844841 2848359 D TIGRFAM: urea amidolyase related protein; urea carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: rpa:RPA1405 putative UreA amidolyase; urea carboxylase 2844841..2848359 Methylocella silvestris BL2 7093260 YP_002362892.1 CDS Msil_2607 NC_011666.1 2848356 2850161 D TIGRFAM: allophanate hydrolase; PFAM: Amidase; KEGG: met:M446_3691 allophanate hydrolase; allophanate hydrolase 2848356..2850161 Methylocella silvestris BL2 7093261 YP_002362893.1 CDS Msil_2608 NC_011666.1 2850178 2851293 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bxe:Bxe_A0005 putative NADH-dependent flavin oxidoreductase; NADH:flavin oxidoreductase complement(2850178..2851293) Methylocella silvestris BL2 7093262 YP_002362894.1 CDS Msil_2609 NC_011666.1 2851495 2852211 D PFAM: protein of unknown function DUF1275; KEGG: rpb:RPB_0199 protein of unknown function DUF1275; hypothetical protein 2851495..2852211 Methylocella silvestris BL2 7093263 YP_002362895.1 CDS Msil_2610 NC_011666.1 2852524 2853825 D PFAM: polysaccharide biosynthesis protein; KEGG: afw:Anae109_1814 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 2852524..2853825 Methylocella silvestris BL2 7093264 YP_002362896.1 CDS Msil_2611 NC_011666.1 2853935 2854609 D TIGRFAM: methyltransferase FkbM family; KEGG: pph:Ppha_0411 methyltransferase FkbM family; FkbM family methyltransferase 2853935..2854609 Methylocella silvestris BL2 7093265 YP_002362897.1 CDS Msil_2612 NC_011666.1 2854808 2856031 D PFAM: glycosyl transferase group 1; KEGG: amr:AM1_0384 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 2854808..2856031 Methylocella silvestris BL2 7093266 YP_002362898.1 CDS Msil_2613 NC_011666.1 2856137 2856757 D KEGG: eli:ELI_07140 hypothetical protein; hypothetical protein 2856137..2856757 Methylocella silvestris BL2 7093267 YP_002362899.1 CDS Msil_2614 NC_011666.1 2856781 2857836 R KEGG: rle:pRL120166 putative transmembrane protein; putative transmembrane protein complement(2856781..2857836) Methylocella silvestris BL2 7093268 YP_002362900.1 CDS Msil_2615 NC_011666.1 2858057 2859340 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bra:BRADO6813 putative NADH dehydrogenase FAD-containing subunit transmembrane protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2858057..2859340 Methylocella silvestris BL2 7093269 YP_002362901.1 CDS Msil_2616 NC_011666.1 2859500 2861524 D PFAM: surface antigen (D15); KEGG: mpo:Mpop_2888 surface antigen (D15); surface antigen (D15) 2859500..2861524 Methylocella silvestris BL2 7093270 YP_002362902.1 CDS Msil_2617 NC_011666.1 2861524 2865798 D PFAM: protein of unknown function DUF490; KEGG: mrd:Mrad2831_2388 protein of unknown function DUF490; hypothetical protein 2861524..2865798 Methylocella silvestris BL2 7093271 YP_002362903.1 CDS Msil_2618 NC_011666.1 2865848 2866558 D KEGG: bid:Bind_2357 glutathione S-transferase domain; glutathione S-transferase domain-containing protein 2865848..2866558 Methylocella silvestris BL2 7093272 YP_002362904.1 CDS Msil_2619 NC_011666.1 2866572 2866994 D PFAM: thioesterase superfamily protein; KEGG: bid:Bind_3477 thioesterase superfamily protein; thioesterase superfamily protein 2866572..2866994 Methylocella silvestris BL2 7093273 YP_002362905.1 CDS Msil_2620 NC_011666.1 2867257 2868522 D PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: afm:AFUA_6G12240 glycerophosphoryl diester phosphodiesterase family protein; glycerophosphoryl diester phosphodiesterase 2867257..2868522 Methylocella silvestris BL2 7093274 YP_002362906.1 CDS Msil_2621 NC_011666.1 2868646 2869314 R 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon complement(2868646..2869314) Methylocella silvestris BL2 7093275 YP_002362907.1 CDS Msil_2622 NC_011666.1 2869316 2871127 R PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: bja:blr4116 hypothetical protein; putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase complement(2869316..2871127) Methylocella silvestris BL2 7093276 YP_002362908.1 CDS actP NC_011666.1 2871184 2872875 R member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease complement(2871184..2872875) Methylocella silvestris BL2 7091010 YP_002362909.1 CDS Msil_2624 NC_011666.1 2872875 2873180 R PFAM: protein of unknown function DUF485; KEGG: bja:blr4114 hypothetical protein; hypothetical protein complement(2872875..2873180) Methylocella silvestris BL2 7091093 YP_002362910.1 CDS Msil_2625 NC_011666.1 2873646 2874299 D PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bbt:BBta_1941 transcriptional regulator; XRE family transcriptional regulator 2873646..2874299 Methylocella silvestris BL2 7091094 YP_002362911.1 CDS Msil_2626 NC_011666.1 2874323 2874592 R KEGG: mpo:Mpop_0214 hypothetical protein; hypothetical protein complement(2874323..2874592) Methylocella silvestris BL2 7091095 YP_002362912.1 CDS Msil_2627 NC_011666.1 2874582 2875277 R KEGG: mpo:Mpop_0215 conserved hypothetical signal peptide protein; hypothetical protein complement(2874582..2875277) Methylocella silvestris BL2 7091096 YP_002362913.1 CDS Msil_2628 NC_011666.1 2875340 2876764 R PFAM: amino acid permease-associated region; KEGG: mpo:Mpop_0216 amino acid permease-associated region; amino acid permease-associated protein complement(2875340..2876764) Methylocella silvestris BL2 7091097 YP_002362914.1 CDS Msil_2629 NC_011666.1 2876761 2876934 R KEGG: mpo:Mpop_0217 hypothetical protein; hypothetical protein complement(2876761..2876934) Methylocella silvestris BL2 7091098 YP_002362915.1 CDS Msil_2630 NC_011666.1 2877010 2877396 R KEGG: mpo:Mpop_0218 hypothetical protein; hypothetical protein complement(2877010..2877396) Methylocella silvestris BL2 7091099 YP_002362916.1 CDS Msil_2631 NC_011666.1 2877396 2877692 R KEGG: mpo:Mpop_0219 hypothetical protein; hypothetical protein complement(2877396..2877692) Methylocella silvestris BL2 7091100 YP_002362917.1 CDS Msil_2632 NC_011666.1 2878042 2878941 D PFAM: glutamine amidotransferase class-II; KEGG: azc:AZC_1502 amidophosphoribosyltransferase; glutamine amidotransferase 2878042..2878941 Methylocella silvestris BL2 7091101 YP_002362918.1 CDS Msil_2633 NC_011666.1 2878938 2879645 D KEGG: mpo:Mpop_1574 glutamate synthase alpha subunit domain protein; glutamate synthase subunit alpha domain-containing protein 2878938..2879645 Methylocella silvestris BL2 7091102 YP_002362919.1 CDS Msil_2634 NC_011666.1 2879645 2880979 D PFAM: ferredoxin-dependent glutamate synthase; KEGG: mfa:Mfla_0459 glutamate synthase (NADPH) GltB2 subunit; ferredoxin-dependent glutamate synthase 2879645..2880979 Methylocella silvestris BL2 7091103 YP_002362920.1 CDS Msil_2635 NC_011666.1 2881033 2882340 D TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region; KEGG: rpb:RPB_1135 glutamate--ammonia ligase; glutamine synthetase 2881033..2882340 Methylocella silvestris BL2 7091104 YP_002362921.1 CDS Msil_2636 NC_011666.1 2882436 2883686 D TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: azc:AZC_1496 sarcosine oxidase beta subunit; sarcosine oxidase subunit beta family 2882436..2883686 Methylocella silvestris BL2 7091105 YP_002362922.1 CDS Msil_2637 NC_011666.1 2883722 2884009 D PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: bbt:BBta_1948 sarcosine oxidase, delta subunit; sarcosine oxidase subunit delta 2883722..2884009 Methylocella silvestris BL2 7091106 YP_002362923.1 CDS Msil_2638 NC_011666.1 2884006 2886960 D TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mpo:Mpop_1579 sarcosine oxidase, alpha subunit family; sarcosine oxidase subunit alpha family 2884006..2886960 Methylocella silvestris BL2 7091107 YP_002362924.1 CDS Msil_2639 NC_011666.1 2886953 2887582 D PFAM: Sarcosine oxidase gamma subunit; KEGG: rpb:RPB_1144 sarcosine oxidase, gamma subunit; sarcosine oxidase subunit gamma 2886953..2887582 Methylocella silvestris BL2 7091108 YP_002362925.1 CDS Msil_2640 NC_011666.1 2887683 2888078 D KEGG: mex:Mext_3930 dihydrofolate reductase; dihydrofolate reductase 2887683..2888078 Methylocella silvestris BL2 7091109 YP_002362926.1 CDS Msil_2641 NC_011666.1 2888101 2888802 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bch:Bcen2424_4004 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2888101..2888802 Methylocella silvestris BL2 7091110 YP_002362927.1 CDS Msil_2642 NC_011666.1 2888809 2888952 R KEGG: azc:AZC_3761 hypothetical protein; hypothetical protein complement(2888809..2888952) Methylocella silvestris BL2 7091111 YP_002362928.1 CDS Msil_2643 NC_011666.1 2888949 2889956 R TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: azc:AZC_3760 cytochrome bd-type quinol oxidase subunit 2; cytochrome d ubiquinol oxidase, subunit II complement(2888949..2889956) Methylocella silvestris BL2 7091112 YP_002362929.1 CDS Msil_2644 NC_011666.1 2890002 2891426 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: azc:AZC_3759 cytochrome bd-type quinol oxidase subunit 1; cytochrome bd ubiquinol oxidase subunit I complement(2890002..2891426) Methylocella silvestris BL2 7091113 YP_002362930.1 CDS Msil_2645 NC_011666.1 2891676 2892107 R KEGG: bra:BRADO0479 putative transcriptional regulator; hypothetical protein complement(2891676..2892107) Methylocella silvestris BL2 7091114 YP_002362931.1 CDS Msil_2646 NC_011666.1 2892227 2893261 R PFAM: beta-lactamase domain protein; Rhodanese domain protein; KEGG: bbt:BBta_0691 putative Zn-dependent hydrolase including glyoxylases/rhodanese-related sulfurtransferase; beta-lactamase domain-containing protein complement(2892227..2893261) Methylocella silvestris BL2 7091115 YP_002362932.1 CDS Msil_2647 NC_011666.1 2893363 2894025 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bra:BRADO3235 thioredoxin peroxidase (AhpC, alkyl hydroperoxide reductase); peroxidase complement(2893363..2894025) Methylocella silvestris BL2 7091116 YP_002362933.1 CDS Msil_2648 NC_011666.1 2894217 2894909 R KEGG: ppg:PputGB1_3143 hypothetical protein; hypothetical protein complement(2894217..2894909) Methylocella silvestris BL2 7091117 YP_002362934.1 CDS Msil_2649 NC_011666.1 2894946 2895995 R TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ava:Ava_2477 periplasmic phosphate binding protein; phosphate ABC transporter substrate-binding protein complement(2894946..2895995) Methylocella silvestris BL2 7091118 YP_002362935.1 CDS Msil_2650 NC_011666.1 2896031 2896849 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein complement(2896031..2896849) Methylocella silvestris BL2 7091119 YP_002362936.1 CDS Msil_2651 NC_011666.1 2896861 2897775 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppg:PputGB1_3145 phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter permease complement(2896861..2897775) Methylocella silvestris BL2 7091120 YP_002362937.1 CDS Msil_2652 NC_011666.1 2897775 2898743 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppg:PputGB1_3146 phosphate ABC transporter, inner membrane subunit PstC; phosphate ABC transporter permease complement(2897775..2898743) Methylocella silvestris BL2 7091121 YP_002362938.1 CDS Msil_2653 NC_011666.1 2898816 2899847 R TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ppg:PputGB1_3147 phosphate ABC transporter, periplasmic phosphate-binding protein; phosphate ABC transporter substrate-binding protein complement(2898816..2899847) Methylocella silvestris BL2 7091122 YP_002362939.1 CDS Msil_2654 NC_011666.1 2900178 2902388 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(2900178..2902388) Methylocella silvestris BL2 7091123 YP_002362940.1 CDS Msil_2655 NC_011666.1 2902749 2904950 R TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: gvi:gll2771 catalase/peroxidase; catalase/peroxidase HPI complement(2902749..2904950) Methylocella silvestris BL2 7091124 YP_002362941.1 CDS Msil_2656 NC_011666.1 2905534 2906016 D An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 2905534..2906016 Methylocella silvestris BL2 7091125 YP_002362942.1 CDS Msil_2657 NC_011666.1 2906058 2906438 D KEGG: xau:Xaut_0833 hypothetical protein; hypothetical protein 2906058..2906438 Methylocella silvestris BL2 7091126 YP_002362943.1 CDS Msil_2658 NC_011666.1 2906581 2907345 R KEGG: pol:Bpro_1844 hypothetical protein; hypothetical protein complement(2906581..2907345) Methylocella silvestris BL2 7091127 YP_002362944.1 CDS Msil_2659 NC_011666.1 2907348 2907950 R PFAM: protein of unknown function DUF1326; KEGG: mlo:mll4476 hypothetical protein; hypothetical protein complement(2907348..2907950) Methylocella silvestris BL2 7091128 YP_002362945.1 CDS Msil_2660 NC_011666.1 2908286 2909122 R SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mca:MCA0825 AraC family transcriptional regulator; AraC family transcriptional regulator complement(2908286..2909122) Methylocella silvestris BL2 7091129 YP_002362946.1 CDS Msil_2662 NC_011666.1 2909600 2910460 R KEGG: bid:Bind_3066 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein complement(2909600..2910460) Methylocella silvestris BL2 7091131 YP_002362947.1 CDS Msil_2663 NC_011666.1 2910661 2911497 R KEGG: bid:Bind_3066 molybdenum ABC transporter, periplasmic molybdate-binding protein; hypothetical protein complement(2910661..2911497) Methylocella silvestris BL2 7091132 YP_002362948.1 CDS Msil_2664 NC_011666.1 2912062 2915238 D TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; GLUG domain protein; KEGG: xau:Xaut_2282 filamentous haemagglutinin outer membrane protein; filamentous hemagglutinin family outer membrane protein 2912062..2915238 Methylocella silvestris BL2 7091133 YP_002362949.1 CDS Msil_2665 NC_011666.1 2915269 2916993 D PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: nha:Nham_0727 hemolysin activation/secretion protein-like; polypeptide-transport-associated domain-containing protein 2915269..2916993 Methylocella silvestris BL2 7091134 YP_002362950.1 CDS Msil_2666 NC_011666.1 2917081 2917509 D TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; KEGG: bid:Bind_3061 TonB-system energizer ExbB; tonB-system energizer ExbB 2917081..2917509 Methylocella silvestris BL2 7091135 YP_002362951.1 CDS Msil_2667 NC_011666.1 2917502 2917885 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bid:Bind_3062 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 2917502..2917885 Methylocella silvestris BL2 7091136 YP_002362952.1 CDS Msil_2668 NC_011666.1 2917930 2918688 D TIGRFAM: TonB family protein; KEGG: bid:Bind_3063 TonB family protein; TonB family protein 2917930..2918688 Methylocella silvestris BL2 7091137 YP_002362953.1 CDS Msil_2669 NC_011666.1 2918787 2919920 D PFAM: Luciferase-like monooxygenase; KEGG: psb:Psyr_3599 alkanesulfonate monooxygenase; Alkanesulfonate monooxygenase 2918787..2919920 Methylocella silvestris BL2 7091138 YP_002362954.1 CDS Msil_2670 NC_011666.1 2919949 2921118 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bid:Bind_0523 acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase 2919949..2921118 Methylocella silvestris BL2 7091139 YP_002362955.1 CDS Msil_2671 NC_011666.1 2921140 2922243 D PFAM: NMT1/THI5 like domain protein; KEGG: bbt:BBta_3303 putative alkanesulfonate ABC transporter, substrate binding protein; NMT1/THI5 like domain-containing protein 2921140..2922243 Methylocella silvestris BL2 7091140 YP_002362956.1 CDS Msil_2672 NC_011666.1 2922230 2923270 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpt:Rpal_2687 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2922230..2923270 Methylocella silvestris BL2 7091141 YP_002362957.1 CDS Msil_2673 NC_011666.1 2923264 2924052 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bid:Bind_2057 ABC transporter related; ABC transporter-like protein 2923264..2924052 Methylocella silvestris BL2 7091142 YP_002362958.1 CDS Msil_2674 NC_011666.1 2924069 2924674 D PFAM: cysteine dioxygenase type I; KEGG: bbt:BBta_2159 hypothetical protein; cysteine dioxygenase type I 2924069..2924674 Methylocella silvestris BL2 7091143 YP_002362959.1 CDS Msil_2675 NC_011666.1 2924744 2925796 R KEGG: rpc:RPC_2373 hypothetical protein; hypothetical protein complement(2924744..2925796) Methylocella silvestris BL2 7091144 YP_002362960.1 CDS Msil_2676 NC_011666.1 2926066 2926968 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ret:RHE_PE00143 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator complement(2926066..2926968) Methylocella silvestris BL2 7091145 YP_002362961.1 CDS Msil_2677 NC_011666.1 2927067 2927924 D PFAM: TrkA-N domain protein; NmrA family protein; KEGG: rle:pRL120543 hypothetical protein; NmrA family protein 2927067..2927924 Methylocella silvestris BL2 7091146 YP_002362962.1 CDS Msil_2678 NC_011666.1 2927966 2929222 R KEGG: bur:Bcep18194_B1256 glucose-6-phosphate isomerase and related metalloenzyme; TIGRFAM: bicupin, oxalate decarboxylase family; PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein; oxalate decarboxylase family bicupin complement(2927966..2929222) Methylocella silvestris BL2 7091147 YP_002362963.1 CDS Msil_2679 NC_011666.1 2929246 2930025 R KEGG: bpy:Bphyt_4596 hypothetical protein; hypothetical protein complement(2929246..2930025) Methylocella silvestris BL2 7091148 YP_002362964.1 CDS Msil_2680 NC_011666.1 2930184 2930417 R hypothetical protein complement(2930184..2930417) Methylocella silvestris BL2 7091149 YP_002362965.1 CDS Msil_2681 NC_011666.1 2930742 2931107 R PFAM: response regulator receiver; KEGG: azc:AZC_1362 two-component response regulator; response regulator receiver protein complement(2930742..2931107) Methylocella silvestris BL2 7091150 YP_002362966.1 CDS Msil_2682 NC_011666.1 2931180 2931848 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rpt:Rpal_1519 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(2931180..2931848) Methylocella silvestris BL2 7091151 YP_002362967.1 CDS Msil_2683 NC_011666.1 2931845 2933845 R KEGG: rpb:RPB_0213 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase complement(2931845..2933845) Methylocella silvestris BL2 7091152 YP_002362968.1 CDS Msil_2684 NC_011666.1 2934534 2935823 D KEGG: bbt:BBta_1526 hypothetical protein; hypothetical protein 2934534..2935823 Methylocella silvestris BL2 7091153 YP_002362969.1 CDS Msil_2685 NC_011666.1 2935856 2936269 R PFAM: TadE family protein; KEGG: bbt:BBta_1523 hypothetical protein; TadE family protein complement(2935856..2936269) Methylocella silvestris BL2 7091154 YP_002362970.1 CDS Msil_2686 NC_011666.1 2936273 2936797 R KEGG: bbt:BBta_1525 hypothetical protein; hypothetical protein complement(2936273..2936797) Methylocella silvestris BL2 7091155 YP_002362971.1 CDS Msil_2687 NC_011666.1 2936966 2937151 D PFAM: Flp/Fap pilin component; KEGG: bbt:BBta_1527 putative Flp/Fap pilin component; Flp/Fap pilin component 2936966..2937151 Methylocella silvestris BL2 7091156 YP_002362972.1 CDS Msil_2688 NC_011666.1 2937302 2937985 D PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bja:blr3497 hypothetical protein; isoprenylcysteine carboxyl methyltransferase 2937302..2937985 Methylocella silvestris BL2 7091157 YP_002362973.1 CDS Msil_2689 NC_011666.1 2938337 2938876 D PFAM: peptidase A24A prepilin type IV; KEGG: bbt:BBta_1528 hypothetical protein; peptidase A24A prepilin type IV 2938337..2938876 Methylocella silvestris BL2 7091158 YP_002362974.1 CDS Msil_2690 NC_011666.1 2938876 2939892 D TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: bbt:BBta_1513 hypothetical protein; Flp pilus assembly protein CpaB 2938876..2939892 Methylocella silvestris BL2 7091159 YP_002362975.1 CDS Msil_2691 NC_011666.1 2939905 2941074 D KEGG: bbt:BBta_1514 putative response regulator receiver; response regulator receiver protein 2939905..2941074 Methylocella silvestris BL2 7091160 YP_002362976.1 CDS Msil_2692 NC_011666.1 2941077 2942465 D PFAM: type II secretion system protein E; KEGG: bbt:BBta_1515 secretory protein kinase, CpaF; type II secretion system protein E 2941077..2942465 Methylocella silvestris BL2 7091161 YP_002362977.1 CDS Msil_2693 NC_011666.1 2942470 2943429 D PFAM: type II secretion system protein; KEGG: bbt:BBta_1516 putative type II secretion system protein precursor; type II secretion system protein 2942470..2943429 Methylocella silvestris BL2 7091162 YP_002362978.1 CDS Msil_2694 NC_011666.1 2943449 2944411 D PFAM: type II secretion system protein; KEGG: bbt:BBta_1517 hypothetical protein; type II secretion system protein 2943449..2944411 Methylocella silvestris BL2 7091163 YP_002362979.1 CDS Msil_2695 NC_011666.1 2944894 2946486 D PFAM: type II and III secretion system protein; transport-associated; KEGG: bbt:BBta_1519 putative pilus assembly protein CpaC; type II and III secretion system protein 2944894..2946486 Methylocella silvestris BL2 7091164 YP_002362980.1 CDS Msil_2696 NC_011666.1 2946498 2946944 D KEGG: bbt:BBta_1520 hypothetical protein; hypothetical protein 2946498..2946944 Methylocella silvestris BL2 7091165 YP_002362981.1 CDS Msil_2697 NC_011666.1 2947034 2947555 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:blr3502 hypothetical protein; hypothetical protein 2947034..2947555 Methylocella silvestris BL2 7091166 YP_002362982.1 CDS Msil_2698 NC_011666.1 2947623 2949857 D KEGG: hne:HNE_3332 putative transporter; putative transporter 2947623..2949857 Methylocella silvestris BL2 7091167 YP_002362983.1 CDS Msil_2699 NC_011666.1 2949883 2953629 R KEGG: bac:BamMC406_3901 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(2949883..2953629) Methylocella silvestris BL2 7091168 YP_002362984.1 CDS Msil_2700 NC_011666.1 2953646 2956252 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: rpc:RPC_1464 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains); GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(2953646..2956252) Methylocella silvestris BL2 7091169 YP_002362985.1 CDS Msil_2701 NC_011666.1 2956538 2957539 R PFAM: secretion protein HlyD family protein; KEGG: azc:AZC_1641 hypothetical protein; secretion protein HlyD family protein complement(2956538..2957539) Methylocella silvestris BL2 7091170 YP_002362986.1 CDS Msil_2702 NC_011666.1 2957529 2959871 R PFAM: ABC-2 type transporter; KEGG: azc:AZC_1640 hypothetical protein; ABC-2 type transporter complement(2957529..2959871) Methylocella silvestris BL2 7091171 YP_002362987.1 CDS Msil_2703 NC_011666.1 2959868 2960971 R PFAM: secretion protein HlyD family protein; KEGG: azc:AZC_1639 hypothetical protein; secretion protein HlyD family protein complement(2959868..2960971) Methylocella silvestris BL2 7091172 YP_002362988.1 CDS Msil_2704 NC_011666.1 2961378 2962349 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bph:Bphy_6977 transcriptional regulator, LysR family; LysR family transcriptional regulator 2961378..2962349 Methylocella silvestris BL2 7091173 YP_002362989.1 CDS Msil_2705 NC_011666.1 2962905 2963858 D PFAM: phosphate acetyl/butaryl transferase; KEGG: cti:RALTA_A1396 putative phosphate acetyl/butyryltransferase; phosphate butyryltransferase 2962905..2963858 Methylocella silvestris BL2 7092456 YP_002362990.1 CDS Msil_2706 NC_011666.1 2963861 2965057 D TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: reu:Reut_A1203 acetate kinase; acetate kinase 2963861..2965057 Methylocella silvestris BL2 7092159 YP_002362991.1 CDS Msil_2707 NC_011666.1 2965224 2965697 D KEGG: xau:Xaut_2306 hypothetical protein; hypothetical protein 2965224..2965697 Methylocella silvestris BL2 7092160 YP_002362992.1 CDS Msil_2708 NC_011666.1 2965919 2968234 D KEGG: bid:Bind_0202 hypothetical protein; hypothetical protein 2965919..2968234 Methylocella silvestris BL2 7092161 YP_002362993.1 CDS Msil_2709 NC_011666.1 2968277 2969053 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bmj:BMULJ_05779 NADH-dependent enoyl-[acyl-carrier protein] reductase; short-chain dehydrogenase/reductase SDR 2968277..2969053 Methylocella silvestris BL2 7092162 YP_002362994.1 CDS Msil_2710 NC_011666.1 2969353 2969925 D KEGG: bid:Bind_3503 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 2969353..2969925 Methylocella silvestris BL2 7092163 YP_002362995.1 CDS Msil_2711 NC_011666.1 2969922 2970992 D TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rpb:RPB_1562 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 2969922..2970992 Methylocella silvestris BL2 7092164 YP_002362996.1 CDS Msil_2712 NC_011666.1 2970989 2971864 D PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: azc:AZC_1832 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 2970989..2971864 Methylocella silvestris BL2 7092165 YP_002362997.1 CDS Msil_2713 NC_011666.1 2971963 2972832 D TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: dac:Daci_1277 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 2971963..2972832 Methylocella silvestris BL2 7092166 YP_002362998.1 CDS Msil_2714 NC_011666.1 2972844 2974025 R PFAM: polysaccharide export protein; KEGG: azc:AZC_0035 putative periplasmic protein; polysaccharide export protein complement(2972844..2974025) Methylocella silvestris BL2 7092167 YP_002362999.1 CDS Msil_2715 NC_011666.1 2974264 2976534 D PFAM: glycosyl transferase family 2; KEGG: bca:BCE_0305 hypothetical protein; family 2 glycosyl transferase 2974264..2976534 Methylocella silvestris BL2 7092168 YP_002363000.1 CDS Msil_2716 NC_011666.1 2976550 2978751 R PFAM: glycosyl transferase group 1; Methyltransferase type 11; Methyltransferase type 12; KEGG: xau:Xaut_3815 glycosyl transferase group 1; group 1 glycosyl transferase complement(2976550..2978751) Methylocella silvestris BL2 7092169 YP_002363001.1 CDS Msil_2717 NC_011666.1 2978762 2979688 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: azc:AZC_1522 NAD-dependent epimerase; NAD-dependent epimerase/dehydratase complement(2978762..2979688) Methylocella silvestris BL2 7092170 YP_002363002.1 CDS Msil_2718 NC_011666.1 2979704 2981200 R PFAM: glycosyl transferase group 1; KEGG: xau:Xaut_3813 glycosyl transferase group 1; group 1 glycosyl transferase complement(2979704..2981200) Methylocella silvestris BL2 7092171 YP_002363003.1 CDS Msil_2719 NC_011666.1 2981370 2983358 R PFAM: glycosyl transferase family 2; KEGG: mpo:Mpop_0564 glycosyl transferase family 2; family 2 glycosyl transferase complement(2981370..2983358) Methylocella silvestris BL2 7092172 YP_002363004.1 CDS Msil_2720 NC_011666.1 2983367 2984422 R KEGG: xau:Xaut_3818 hypothetical protein; hypothetical protein complement(2983367..2984422) Methylocella silvestris BL2 7092173 YP_002363005.1 CDS Msil_2721 NC_011666.1 2984603 2985838 R KEGG: met:M446_4871 capsule polysaccharide export protein-like protein; capsule polysaccharide export protein-like protein complement(2984603..2985838) Methylocella silvestris BL2 7092174 YP_002363006.1 CDS Msil_2722 NC_011666.1 2985954 2987252 R KEGG: met:M446_4871 capsule polysaccharide export protein-like protein; capsule polysaccharide export protein-like protein complement(2985954..2987252) Methylocella silvestris BL2 7092175 YP_002363007.1 CDS Msil_2723 NC_011666.1 2987864 2995342 D PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Methyltransferase type 12; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: bid:Bind_1113 beta-ketoacyl synthase; beta-ketoacyl synthase 2987864..2995342 Methylocella silvestris BL2 7092176 YP_002363008.1 CDS Msil_2724 NC_011666.1 2995348 2996640 D PFAM: glycosyl transferase group 1; KEGG: met:M446_5069 glycosyl transferase group 1; group 1 glycosyl transferase 2995348..2996640 Methylocella silvestris BL2 7092177 YP_002363009.1 CDS Msil_2725 NC_011666.1 2996635 2997429 R KEGG: sal:Sala_0623 CDP-alcohol phosphatidyltransferase; hypothetical protein complement(2996635..2997429) Methylocella silvestris BL2 7092178 YP_002363010.1 CDS Msil_2726 NC_011666.1 2997561 2998748 D PFAM: glycosyl transferase family 2; KEGG: bid:Bind_0447 glycosyl transferase family 2; family 2 glycosyl transferase 2997561..2998748 Methylocella silvestris BL2 7092179 YP_002363011.1 CDS Msil_2727 NC_011666.1 2998745 2999884 R KEGG: hne:HNE_1584 hypothetical protein; hypothetical protein complement(2998745..2999884) Methylocella silvestris BL2 7092180 YP_002363012.1 CDS Msil_2728 NC_011666.1 2999881 3001275 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class I and II; aminotransferase class-III; KEGG: met:M446_0318 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase complement(2999881..3001275) Methylocella silvestris BL2 7092181 YP_002363013.1 CDS Msil_2729 NC_011666.1 3001513 3002466 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: met:M446_2892 methyltransferase type 12; type 11 methyltransferase 3001513..3002466 Methylocella silvestris BL2 7092182 YP_002363014.1 CDS Msil_2730 NC_011666.1 3002509 3003159 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mrd:Mrad2831_5580 ABC transporter related; ABC transporter-like protein complement(3002509..3003159) Methylocella silvestris BL2 7092183 YP_002363015.1 CDS Msil_2731 NC_011666.1 3003164 3004348 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: xau:Xaut_3812 capsule polysaccharide export protein-like protein; lipopolysaccharide biosynthesis protein complement(3003164..3004348) Methylocella silvestris BL2 7092184 YP_002363016.1 CDS Msil_2732 NC_011666.1 3004912 3005997 D KEGG: mex:Mext_4517 hypothetical protein; TIGRFAM: methyltransferase FkbM family; PFAM: coagulation factor 5/8 type domain protein; SMART: Fucolectin tachylectin-4 pentraxin-1; FkbM family methyltransferase 3004912..3005997 Methylocella silvestris BL2 7092185 YP_002363017.1 CDS Msil_2733 NC_011666.1 3006009 3008345 R PFAM: coagulation factor 5/8 type domain protein; SMART: Fucolectin tachylectin-4 pentraxin-1; KEGG: mrd:Mrad2831_3110 hypothetical protein; coagulation factor 5/8 type domain-containing protein complement(3006009..3008345) Methylocella silvestris BL2 7092186 YP_002363018.1 CDS Msil_2734 NC_011666.1 3008427 3009224 R TIGRFAM: methyltransferase FkbM family; KEGG: met:M446_5723 methyltransferase FkbM family; FkbM family methyltransferase complement(3008427..3009224) Methylocella silvestris BL2 7092187 YP_002363019.1 CDS Msil_2735 NC_011666.1 3009243 3012905 R PFAM: glycosyl transferase group 1; KEGG: met:M446_5389 glycosyl transferase group 1; group 1 glycosyl transferase complement(3009243..3012905) Methylocella silvestris BL2 7092188 YP_002363020.1 CDS Msil_2736 NC_011666.1 3013039 3013845 R PFAM: ABC-2 type transporter; KEGG: mrd:Mrad2831_6193 ABC-2 type transporter; ABC-2 type transporter complement(3013039..3013845) Methylocella silvestris BL2 7092189 YP_002363021.1 CDS Msil_2737 NC_011666.1 3014639 3015502 R KEGG: bch:Bcen2424_0773 hypothetical protein; hypothetical protein complement(3014639..3015502) Methylocella silvestris BL2 7092190 YP_002363022.1 CDS Msil_2738 NC_011666.1 3015819 3017237 D KEGG: mpo:Mpop_4886 hypothetical protein; hypothetical protein 3015819..3017237 Methylocella silvestris BL2 7092191 YP_002363023.1 CDS Msil_2740 NC_011666.1 3017723 3018772 R TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: rpd:RPD_1178 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE complement(3017723..3018772) Methylocella silvestris BL2 7092193 YP_002363024.1 CDS Msil_2741 NC_011666.1 3018769 3019914 R TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: rpa:RPA0977 hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein HypD complement(3018769..3019914) Methylocella silvestris BL2 7092194 YP_002363025.1 CDS Msil_2742 NC_011666.1 3019911 3020159 R TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: rpa:RPA0976 putative HypC; hydrogenase assembly chaperone HypC/HupF complement(3019911..3020159) Methylocella silvestris BL2 7092195 YP_002363026.1 CDS Msil_2743 NC_011666.1 3020164 3022446 R TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: rpd:RPD_1175 (NiFe) hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF complement(3020164..3022446) Methylocella silvestris BL2 7092196 YP_002363027.1 CDS Msil_2744 NC_011666.1 3022460 3023341 R TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: rpd:RPD_1174 hydrogenase accessory protein HypB; hydrogenase nickel incorporation protein HypB complement(3022460..3023341) Methylocella silvestris BL2 7092197 YP_002363028.1 CDS Msil_2745 NC_011666.1 3023341 3023682 R TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: rpd:RPD_1173 hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA complement(3023341..3023682) Methylocella silvestris BL2 7092198 YP_002363029.1 CDS Msil_2746 NC_011666.1 3023675 3024088 R PFAM: response regulator receiver; KEGG: ote:Oter_1719 histidine kinase; response regulator receiver protein complement(3023675..3024088) Methylocella silvestris BL2 7092199 YP_002363030.1 CDS Msil_2747 NC_011666.1 3024085 3024576 R TIGRFAM: hydrogenase maturation protease; KEGG: hch:HCH_00104 Ni,Fe-hydrogenase maturation factor; hydrogenase maturation protease complement(3024085..3024576) Methylocella silvestris BL2 7092200 YP_002363031.1 CDS Msil_2748 NC_011666.1 3024573 3026039 R PFAM: nickel-dependent hydrogenase large subunit; KEGG: mca:MCA0114 NAD-reducing hydrogenase, beta subunit; nickel-dependent hydrogenase large subunit complement(3024573..3026039) Methylocella silvestris BL2 7092201 YP_002363032.1 CDS Msil_2749 NC_011666.1 3026065 3026637 R PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: hch:HCH_00106 coenzyme F420-reducing hydrogenase, gamma subunit; Hydrogen dehydrogenase complement(3026065..3026637) Methylocella silvestris BL2 7092202 YP_002363033.1 CDS Msil_2750 NC_011666.1 3026634 3027356 R PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dar:Daro_0980 ferredoxin; 4Fe-4S ferredoxin complement(3026634..3027356) Methylocella silvestris BL2 7092203 YP_002363034.1 CDS Msil_2751 NC_011666.1 3027358 3029169 R PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: hch:HCH_00108 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; respiratory-chain NADH dehydrogenase domain 51 kDa subunit complement(3027358..3029169) Methylocella silvestris BL2 7092204 YP_002363035.1 CDS Msil_2752 NC_011666.1 3029462 3029746 R KEGG: bja:bll2357 hypothetical protein; hypothetical protein complement(3029462..3029746) Methylocella silvestris BL2 7092205 YP_002363036.1 CDS Msil_2753 NC_011666.1 3030173 3030883 D PFAM: carbonic anhydrase; KEGG: rpd:RPD_0790 carbonic anhydrase; carbonic anhydrase 3030173..3030883 Methylocella silvestris BL2 7092206 YP_002363037.1 CDS Msil_2754 NC_011666.1 3032343 3032615 D KEGG: tcr:506289.140 surface protease GP63, putative Pfam: Peptidase_M8 PROSITE: ZINC_PROTEASE ALA_RICH; hypothetical protein 3032343..3032615 Methylocella silvestris BL2 7092207 YP_002363038.1 CDS Msil_2755 NC_011666.1 3032870 3034099 D PFAM: Patatin; KEGG: bid:Bind_0164 patatin; patatin 3032870..3034099 Methylocella silvestris BL2 7092208 YP_002363039.1 CDS Msil_2756 NC_011666.1 3034190 3034924 D KEGG: bid:Bind_1962 hypothetical protein; hypothetical protein 3034190..3034924 Methylocella silvestris BL2 7092209 YP_002363040.1 CDS Msil_2757 NC_011666.1 3034970 3035734 R KEGG: bid:Bind_1867 hypothetical protein; hypothetical protein complement(3034970..3035734) Methylocella silvestris BL2 7092210 YP_002363041.1 CDS Msil_2758 NC_011666.1 3035901 3037625 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: rle:RL2866 putative transmembrane sulfate transporter; sulfate transporter complement(3035901..3037625) Methylocella silvestris BL2 7092211 YP_002363042.1 CDS Msil_2759 NC_011666.1 3037726 3037977 R hypothetical protein complement(3037726..3037977) Methylocella silvestris BL2 7092212 YP_002363043.1 CDS Msil_2760 NC_011666.1 3038287 3039588 D TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: met:M446_1581 TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor, TAXI family 3038287..3039588 Methylocella silvestris BL2 7092213 YP_002363044.1 CDS Msil_2761 NC_011666.1 3039745 3040059 R hypothetical protein complement(3039745..3040059) Methylocella silvestris BL2 7092214 YP_002363045.1 CDS Msil_2763 NC_011666.1 3041961 3042647 D hypothetical protein 3041961..3042647 Methylocella silvestris BL2 7092216 YP_002363046.1 CDS Msil_2764 NC_011666.1 3042750 3042968 D PFAM: Prophage CP4-57 regulatory; KEGG: nis:NIS_1328 transcriptional regulator; phage transcriptional regulator AlpA 3042750..3042968 Methylocella silvestris BL2 7092217 YP_002363047.1 CDS Msil_2765 NC_011666.1 3042972 3043175 D hypothetical protein 3042972..3043175 Methylocella silvestris BL2 7092218 YP_002363048.1 CDS Msil_2766 NC_011666.1 3043172 3043627 D hypothetical protein 3043172..3043627 Methylocella silvestris BL2 7092219 YP_002363049.1 CDS Msil_2767 NC_011666.1 3043624 3044601 D KEGG: bpt:Bpet0969 hypothetical protein; hypothetical protein 3043624..3044601 Methylocella silvestris BL2 7092220 YP_002363050.1 CDS Msil_2768 NC_011666.1 3044666 3046261 D KEGG: rle:RL3945 putative phage DNA primase/helicase; hypothetical protein 3044666..3046261 Methylocella silvestris BL2 7092221 YP_002363051.1 CDS Msil_2769 NC_011666.1 3046279 3046569 D KEGG: aau:AAur_3868 hypothetical protein; hypothetical protein 3046279..3046569 Methylocella silvestris BL2 7092222 YP_002363052.1 CDS Msil_2770 NC_011666.1 3046566 3046970 D KEGG: xau:Xaut_3441 hypothetical protein; hypothetical protein 3046566..3046970 Methylocella silvestris BL2 7092223 YP_002363053.1 CDS Msil_2771 NC_011666.1 3047820 3048014 D hypothetical protein 3047820..3048014 Methylocella silvestris BL2 7092224 YP_002363054.1 CDS Msil_2773 NC_011666.1 3049075 3049977 D KEGG: met:M446_4127 phage tail tape measure protein, TP901 family; hypothetical protein 3049075..3049977 Methylocella silvestris BL2 7092226 YP_002363055.1 CDS Msil_2774 NC_011666.1 3049974 3050813 D KEGG: bmt:BSUIS_A0256 peptidoglycan hydrolase FlgJ; hypothetical protein 3049974..3050813 Methylocella silvestris BL2 7092227 YP_002363056.1 CDS Msil_2775 NC_011666.1 3050895 3052907 D KEGG: mrd:Mrad2831_5681 hypothetical protein; hypothetical protein 3050895..3052907 Methylocella silvestris BL2 7092228 YP_002363057.1 CDS Msil_2776 NC_011666.1 3053191 3053400 R hypothetical protein complement(3053191..3053400) Methylocella silvestris BL2 7092229 YP_002363058.1 CDS Msil_2777 NC_011666.1 3054241 3054750 D KEGG: ajs:Ajs_4247 hypothetical protein; hypothetical protein 3054241..3054750 Methylocella silvestris BL2 7092230 YP_002363059.1 CDS Msil_2778 NC_011666.1 3054915 3055154 D hypothetical protein 3054915..3055154 Methylocella silvestris BL2 7092231 YP_002363060.1 CDS Msil_2779 NC_011666.1 3055481 3056995 D KEGG: psp:PSPPH_0943 circadian oscillation regulator KaiC-like protein; PFAM: KaiA binding; SMART: AAA ATPase; Non-specific serine/threonine protein kinase 3055481..3056995 Methylocella silvestris BL2 7092232 YP_002363061.1 CDS Msil_2780 NC_011666.1 3056985 3058661 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pfo:PflO1_2652 histidine kinase; histidine kinase 3056985..3058661 Methylocella silvestris BL2 7092233 YP_002363062.1 CDS Msil_2781 NC_011666.1 3058816 3059598 D PFAM: manganese containing catalase; KEGG: bid:Bind_0288 manganese containing catalase; manganese containing catalase 3058816..3059598 Methylocella silvestris BL2 7092234 YP_002363063.1 CDS Msil_2782 NC_011666.1 3059712 3060689 R PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_5011 putative alpha/beta hydrolase; alpha/beta hydrolase fold protein complement(3059712..3060689) Methylocella silvestris BL2 7092235 YP_002363064.1 CDS Msil_2783 NC_011666.1 3060793 3061386 R PFAM: protein of unknown function DUF159; KEGG: mes:Meso_3812 protein of unknown function DUF159; hypothetical protein complement(3060793..3061386) Methylocella silvestris BL2 7092236 YP_002363065.1 CDS Msil_2784 NC_011666.1 3061440 3061694 R KEGG: rpb:RPB_2086 hypothetical protein; hypothetical protein complement(3061440..3061694) Methylocella silvestris BL2 7092237 YP_002363066.1 CDS Msil_2785 NC_011666.1 3061682 3061972 R hypothetical protein complement(3061682..3061972) Methylocella silvestris BL2 7092238 YP_002363067.1 CDS Msil_2786 NC_011666.1 3062073 3062651 R hypothetical protein complement(3062073..3062651) Methylocella silvestris BL2 7092239 YP_002363068.1 CDS Msil_2787 NC_011666.1 3063144 3063992 D PFAM: ParB domain protein nuclease; KEGG: sit:TM1040_1633 hypothetical protein; ParB domain-containing protein nuclease 3063144..3063992 Methylocella silvestris BL2 7092453 YP_002363069.1 CDS Msil_2788 NC_011666.1 3064082 3064240 R hypothetical protein complement(3064082..3064240) Methylocella silvestris BL2 7092950 YP_002363070.1 CDS Msil_2789 NC_011666.1 3064375 3064701 D hypothetical protein 3064375..3064701 Methylocella silvestris BL2 7092951 YP_002363071.1 CDS Msil_2790 NC_011666.1 3064777 3065472 D KEGG: mlo:mll0429 hypothetical protein; hypothetical protein 3064777..3065472 Methylocella silvestris BL2 7092952 YP_002363072.1 CDS Msil_2791 NC_011666.1 3065476 3065877 D hypothetical protein 3065476..3065877 Methylocella silvestris BL2 7092953 YP_002363073.1 CDS Msil_2792 NC_011666.1 3066183 3066371 R hypothetical protein complement(3066183..3066371) Methylocella silvestris BL2 7092954 YP_002363074.1 CDS Msil_2793 NC_011666.1 3066461 3066790 R KEGG: bid:Bind_1074 hypothetical protein; hypothetical protein complement(3066461..3066790) Methylocella silvestris BL2 7092955 YP_002363075.1 CDS Msil_2794 NC_011666.1 3067509 3067886 R PFAM: response regulator receiver; KEGG: rpb:RPB_4041 response regulator receiver domain protein; response regulator receiver protein complement(3067509..3067886) Methylocella silvestris BL2 7092956 YP_002363076.1 CDS Msil_2795 NC_011666.1 3068449 3069432 R KEGG: met:M446_6752 hypothetical protein; hypothetical protein complement(3068449..3069432) Methylocella silvestris BL2 7092958 YP_002363077.1 CDS Msil_2796 NC_011666.1 3069648 3070010 R KEGG: rpd:RPD_2521 hypothetical protein; hypothetical protein complement(3069648..3070010) Methylocella silvestris BL2 7092959 YP_002363078.1 CDS Msil_2797 NC_011666.1 3070196 3071653 D KEGG: met:M446_1545 TRAP-type uncharacterized transport system periplasmic component-like protein; TRAP-type transport system periplasmic component-like protein 3070196..3071653 Methylocella silvestris BL2 7092960 YP_002363079.1 CDS Msil_2798 NC_011666.1 3071812 3072834 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 3071812..3072834 Methylocella silvestris BL2 7092961 YP_002363080.1 CDS Msil_2799 NC_011666.1 3072962 3075775 D catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 3072962..3075775 Methylocella silvestris BL2 7092962 YP_002363081.1 CDS Msil_2800 NC_011666.1 3075896 3076459 D PFAM: GrpE protein; KEGG: bid:Bind_0337 GrpE protein; GrpE protein HSP-70 cofactor 3075896..3076459 Methylocella silvestris BL2 7092963 YP_002363082.1 CDS Msil_2801 NC_011666.1 3077077 3078258 D PFAM: glycosyl transferase group 1; KEGG: bph:Bphy_6700 glycosyl transferase group 1; group 1 glycosyl transferase 3077077..3078258 Methylocella silvestris BL2 7092964 YP_002363083.1 CDS Msil_2802 NC_011666.1 3078268 3078651 R PFAM: helix-turn-helix HxlR type; KEGG: mlo:mll7749 hypothetical protein; HxlR family transcriptional regulator complement(3078268..3078651) Methylocella silvestris BL2 7092965 YP_002363084.1 CDS Msil_2804 NC_011666.1 3079764 3080387 R PFAM: protein of unknown function DUF330; KEGG: bid:Bind_3671 protein of unknown function DUF330; hypothetical protein complement(3079764..3080387) Methylocella silvestris BL2 7092967 YP_002363085.1 CDS Msil_2805 NC_011666.1 3080551 3081624 R PFAM: Mammalian cell entry related domain protein; KEGG: bid:Bind_3670 mammalian cell entry related domain protein; mammalian cell entry domain-containing protein complement(3080551..3081624) Methylocella silvestris BL2 7092968 YP_002363086.1 CDS Msil_2806 NC_011666.1 3081804 3082577 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bid:Bind_3669 ABC transporter related; ABC transporter-like protein complement(3081804..3082577) Methylocella silvestris BL2 7092969 YP_002363087.1 CDS Msil_2807 NC_011666.1 3082689 3083828 R PFAM: protein of unknown function DUF140; KEGG: bid:Bind_3668 protein of unknown function DUF140; hypothetical protein complement(3082689..3083828) Methylocella silvestris BL2 7092970 YP_002363088.1 CDS Msil_2808 NC_011666.1 3084005 3085009 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bid:Bind_3415 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein 3084005..3085009 Methylocella silvestris BL2 7092971 YP_002363089.1 CDS Msil_2809 NC_011666.1 3085251 3087761 D KEGG: bmj:BMULJ_04389 outer membrane autotransporter barrel; hypothetical protein 3085251..3087761 Methylocella silvestris BL2 7092972 YP_002363090.1 CDS Msil_2810 NC_011666.1 3087819 3089318 R PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: bid:Bind_3580 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II complement(3087819..3089318) Methylocella silvestris BL2 7092973 YP_002363091.1 CDS Msil_2811 NC_011666.1 3089566 3089925 R PFAM: helix-hairpin-helix motif; KEGG: met:M446_5276 helix-hairpin-helix motif; helix-hairpin-helix motif protein complement(3089566..3089925) Methylocella silvestris BL2 7092974 YP_002363092.1 CDS Msil_2812 NC_011666.1 3090051 3091031 R TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bid:Bind_0056 thioredoxin reductase; thioredoxin reductase complement(3090051..3091031) Methylocella silvestris BL2 7092975 YP_002363093.1 CDS Msil_2813 NC_011666.1 3091214 3091708 R PFAM: protein of unknown function DUF992; KEGG: bid:Bind_0057 protein of unknown function DUF992; hypothetical protein complement(3091214..3091708) Methylocella silvestris BL2 7092976 YP_002363094.1 CDS Msil_2814 NC_011666.1 3091852 3092229 D PFAM: GtrA family protein; KEGG: met:M446_3397 GtrA family protein; GtrA family protein 3091852..3092229 Methylocella silvestris BL2 7092977 YP_002363095.1 CDS Msil_2815 NC_011666.1 3092351 3092599 R hypothetical protein complement(3092351..3092599) Methylocella silvestris BL2 7092978 YP_002363096.1 CDS Msil_2816 NC_011666.1 3092707 3094440 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: mpo:Mpop_1677 thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate domain-containing TPP-binding protein complement(3092707..3094440) Methylocella silvestris BL2 7092979 YP_002363097.1 CDS Msil_2817 NC_011666.1 3094602 3095081 R PFAM: TspO/MBR family protein; KEGG: met:M446_3711 TspO and MBR like protein; TspO and MBR-like protein complement(3094602..3095081) Methylocella silvestris BL2 7092980 YP_002363098.1 CDS Msil_2818 NC_011666.1 3095331 3095990 R PFAM: Glutathione S-transferase domain; KEGG: smd:Smed_5294 glutathione S-transferase domain; glutathione S-transferase domain-containing protein complement(3095331..3095990) Methylocella silvestris BL2 7092981 YP_002363099.1 CDS Msil_2819 NC_011666.1 3095987 3096466 R PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: smd:Smed_5295 activator of HSP90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein complement(3095987..3096466) Methylocella silvestris BL2 7092982 YP_002363100.1 CDS Msil_2820 NC_011666.1 3096463 3096798 R PFAM: regulatory protein ArsR; KEGG: smd:Smed_5296 regulatory protein ArsR; ArsR family transcriptional regulator complement(3096463..3096798) Methylocella silvestris BL2 7092983 YP_002363101.1 CDS Msil_2821 NC_011666.1 3096864 3097319 R PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: mrd:Mrad2831_0203 putative PTS IIA-like nitrogen-regulatory protein PtsN; putative PTS IIA-like nitrogen-regulatory protein PtsN complement(3096864..3097319) Methylocella silvestris BL2 7092984 YP_002363102.1 CDS Msil_2822 NC_011666.1 3097346 3098038 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mlo:mll3126 two-component response regulator; winged helix family two component transcriptional regulator complement(3097346..3098038) Methylocella silvestris BL2 7092985 YP_002363103.1 CDS Msil_2823 NC_011666.1 3098035 3100740 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: xau:Xaut_3236 osmosensitive K+ channel signal transduction histidine kinase; osmosensitive K+ channel signal transduction histidine kinase complement(3098035..3100740) Methylocella silvestris BL2 7092986 YP_002363104.1 CDS Msil_2824 NC_011666.1 3100761 3101363 R one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C complement(3100761..3101363) Methylocella silvestris BL2 7092987 YP_002363105.1 CDS Msil_2825 NC_011666.1 3101374 3103482 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: xau:Xaut_3238 K+-transporting ATPase, B subunit; K+-transporting ATPase subunit B complement(3101374..3103482) Methylocella silvestris BL2 7092988 YP_002363106.1 CDS Msil_2826 NC_011666.1 3103561 3105270 R KEGG: mlo:mll3133 potassium-transporting ATPase subunit A; TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: K transporting ATPase A subunit; potassium-transporting ATPase subunit A complement(3103561..3105270) Methylocella silvestris BL2 7092989 YP_002363107.1 CDS Msil_2827 NC_011666.1 3105805 3105924 D hypothetical protein 3105805..3105924 Methylocella silvestris BL2 7092990 YP_002363108.1 CDS Msil_2828 NC_011666.1 3106178 3107068 D PFAM: fatty acid desaturase; KEGG: bvi:Bcep1808_3902 fatty acid desaturase; fatty acid desaturase 3106178..3107068 Methylocella silvestris BL2 7092991 YP_002363109.1 CDS Msil_2829 NC_011666.1 3107089 3107904 D KEGG: bxe:Bxe_B0964 putative ABC phosphate/phosphonate transporter, periplasmic ligand binding protein; putative ABC phosphate/phosphonate transporter, periplasmic ligand binding protein 3107089..3107904 Methylocella silvestris BL2 7092992 YP_002363110.1 CDS Msil_2830 NC_011666.1 3108140 3108583 R KEGG: bid:Bind_1685 hypothetical protein; hypothetical protein complement(3108140..3108583) Methylocella silvestris BL2 7092993 YP_002363111.1 CDS Msil_2831 NC_011666.1 3108742 3110235 R PFAM: amino acid permease-associated region; KEGG: bid:Bind_1683 amino acid permease-associated region; amino acid permease-associated protein complement(3108742..3110235) Methylocella silvestris BL2 7092994 YP_002363112.1 CDS Msil_2832 NC_011666.1 3110608 3111240 R PFAM: regulatory protein TetR; KEGG: nmu:Nmul_A1932 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3110608..3111240) Methylocella silvestris BL2 7092995 YP_002363113.1 CDS Msil_2833 NC_011666.1 3111490 3112266 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_0307 ABC transporter related; ABC transporter-like protein 3111490..3112266 Methylocella silvestris BL2 7092996 YP_002363114.1 CDS Msil_2834 NC_011666.1 3112323 3113558 D KEGG: rpb:RPB_0308 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 3112323..3113558 Methylocella silvestris BL2 7092997 YP_002363115.1 CDS Msil_2835 NC_011666.1 3113555 3114385 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_0309 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3113555..3114385 Methylocella silvestris BL2 7092998 YP_002363116.1 CDS Msil_2836 NC_011666.1 3114412 3114945 D PFAM: OsmC family protein; KEGG: rpb:RPB_0304 hypothetical protein; OsmC family protein 3114412..3114945 Methylocella silvestris BL2 7092999 YP_002363117.1 CDS Msil_2837 NC_011666.1 3114956 3116083 D KEGG: rpb:RPB_0305 putative acyl-CoA dehydrogenase; putative acyl-CoA dehydrogenase 3114956..3116083 Methylocella silvestris BL2 7093000 YP_002363118.1 CDS Msil_2838 NC_011666.1 3116127 3116576 R KEGG: bid:Bind_1685 hypothetical protein; hypothetical protein complement(3116127..3116576) Methylocella silvestris BL2 7093001 YP_002363119.1 CDS Msil_2839 NC_011666.1 3116839 3118359 R PFAM: amino acid permease-associated region; KEGG: bid:Bind_1683 amino acid permease-associated region; amino acid permease-associated protein complement(3116839..3118359) Methylocella silvestris BL2 7093002 YP_002363120.1 CDS Msil_2840 NC_011666.1 3118675 3118812 D hypothetical protein 3118675..3118812 Methylocella silvestris BL2 7093003 YP_002363121.1 CDS Msil_2841 NC_011666.1 3118842 3119792 D PFAM: Exopolysaccharide synthesis ExoD; KEGG: bid:Bind_1687 exopolysaccharide synthesis ExoD; Exopolysaccharide synthesis ExoD 3118842..3119792 Methylocella silvestris BL2 7093004 YP_002363122.1 CDS Msil_2842 NC_011666.1 3119789 3120109 D KEGG: bid:Bind_1688 hypothetical protein; hypothetical protein 3119789..3120109 Methylocella silvestris BL2 7093005 YP_002363123.1 CDS Msil_2843 NC_011666.1 3120137 3122866 R PFAM: E1-E2 ATPase-associated domain protein; KEGG: bid:Bind_1691 E1-E2 ATPase-associated domain protein; E1-E2 ATPase-associated domain-containing protein complement(3120137..3122866) Methylocella silvestris BL2 7093006 YP_002363124.1 CDS Msil_2844 NC_011666.1 3123497 3126115 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: bid:Bind_2820 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 3123497..3126115 Methylocella silvestris BL2 7093007 YP_002363125.1 CDS Msil_2845 NC_011666.1 3126151 3126747 R PFAM: Integral membrane protein TerC; KEGG: xau:Xaut_2326 integral membrane protein TerC; integral membrane protein TerC complement(3126151..3126747) Methylocella silvestris BL2 7093008 YP_002363126.1 CDS Msil_2846 NC_011666.1 3127085 3128899 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bid:Bind_1689 sulphate transporter; sulfate transporter complement(3127085..3128899) Methylocella silvestris BL2 7093009 YP_002363127.1 CDS Msil_2847 NC_011666.1 3128963 3129994 R TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bid:Bind_1690 sulfate ABC transporter, periplasmic sulfate-binding protein; sulfate ABC transporter, periplasmic sulfate-binding protein complement(3128963..3129994) Methylocella silvestris BL2 7093010 YP_002363128.1 CDS Msil_2848 NC_011666.1 3130598 3133771 D PFAM: acriflavin resistance protein; KEGG: bam:Bamb_2096 acriflavin resistance protein; acriflavin resistance protein 3130598..3133771 Methylocella silvestris BL2 7093011 YP_002363129.1 CDS Msil_2849 NC_011666.1 3133784 3135049 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bac:BamMC406_1967 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 3133784..3135049 Methylocella silvestris BL2 7093012 YP_002363130.1 CDS Msil_2851 NC_011666.1 3135501 3136508 D TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: bid:Bind_0998 TIM-barrel protein, YjbN family; yjbN family TIM-barrel protein 3135501..3136508 Methylocella silvestris BL2 7093014 YP_002363131.1 CDS Msil_2852 NC_011666.1 3136575 3137474 R PFAM: protein of unknown function DUF815; KEGG: bid:Bind_0999 protein of unknown function DUF815; hypothetical protein complement(3136575..3137474) Methylocella silvestris BL2 7093015 YP_002363132.1 CDS Msil_2853 NC_011666.1 3137635 3138405 D PFAM: carbonic anhydrase; KEGG: rpb:RPB_4625 carbonate dehydratase; carbonate dehydratase 3137635..3138405 Methylocella silvestris BL2 7093016 YP_002363133.1 CDS Msil_2854 NC_011666.1 3138612 3138956 D TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: bid:Bind_1000 preprotein translocase, YajC subunit; preprotein translocase subunit YajC 3138612..3138956 Methylocella silvestris BL2 7093017 YP_002363134.1 CDS Msil_2855 NC_011666.1 3139019 3140617 D TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: bid:Bind_1001 protein-export membrane protein SecD; protein-export membrane protein SecD 3139019..3140617 Methylocella silvestris BL2 7093018 YP_002363135.1 CDS Msil_2856 NC_011666.1 3140653 3141609 D TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: bid:Bind_1002 protein-export membrane protein SecF; protein-export membrane protein SecF 3140653..3141609 Methylocella silvestris BL2 7093019 YP_002363136.1 CDS Msil_2857 NC_011666.1 3141666 3142064 D PFAM: protein of unknown function DUF498; KEGG: bid:Bind_1003 protein of unknown function DUF498; hypothetical protein 3141666..3142064 Methylocella silvestris BL2 7093020 YP_002363137.1 CDS Msil_2858 NC_011666.1 3142064 3142927 D PFAM: Squalene/phytoene synthase; KEGG: bid:Bind_1004 squalene/phytoene synthase; squalene/phytoene synthase 3142064..3142927 Methylocella silvestris BL2 7093021 YP_002363138.1 CDS Msil_2859 NC_011666.1 3143056 3143316 D hypothetical protein 3143056..3143316 Methylocella silvestris BL2 7093022 YP_002363139.1 CDS ileS NC_011666.1 3143544 3146759 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 3143544..3146759 Methylocella silvestris BL2 7093023 YP_002363140.1 CDS Msil_2861 NC_011666.1 3146756 3147271 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 3146756..3147271 Methylocella silvestris BL2 7093024 YP_002363141.1 CDS Msil_2862 NC_011666.1 3147362 3148063 D KEGG: bid:Bind_1008 hypothetical protein; hypothetical protein 3147362..3148063 Methylocella silvestris BL2 7093025 YP_002363142.1 CDS Msil_2863 NC_011666.1 3148351 3149724 D PFAM: peptidase M16 domain protein; KEGG: bid:Bind_1009 peptidase M16 domain protein; peptidase M16 domain-containing protein 3148351..3149724 Methylocella silvestris BL2 7093026 YP_002363143.1 CDS Msil_2864 NC_011666.1 3149780 3151087 D PFAM: peptidase M16 domain protein; KEGG: bid:Bind_1010 peptidase M16 domain protein; peptidase M16 domain-containing protein 3149780..3151087 Methylocella silvestris BL2 7093027 YP_002363144.1 CDS Msil_2865 NC_011666.1 3151136 3151639 D KEGG: smd:Smed_5447 hypothetical protein; hypothetical protein 3151136..3151639 Methylocella silvestris BL2 7093028 YP_002363145.1 CDS Msil_2866 NC_011666.1 3151659 3152246 R PFAM: GCN5-related N-acetyltransferase; KEGG: hne:HNE_1683 acetyltransferase; N-acetyltransferase GCN5 complement(3151659..3152246) Methylocella silvestris BL2 7093029 YP_002363146.1 CDS Msil_2867 NC_011666.1 3152246 3154090 R PFAM: Pyrrolo-quinoline quinone; KEGG: mex:Mext_4524 pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone complement(3152246..3154090) Methylocella silvestris BL2 7093030 YP_002363147.1 CDS Msil_2868 NC_011666.1 3154210 3154962 R KEGG: bra:BRADO3597 hypothetical protein; hypothetical protein complement(3154210..3154962) Methylocella silvestris BL2 7092702 YP_002363148.1 CDS Msil_2869 NC_011666.1 3155296 3157113 D TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: bid:Bind_1011 DNA mismatch repair protein MutL; DNA mismatch repair protein MutL 3155296..3157113 Methylocella silvestris BL2 7092785 YP_002363149.1 CDS Msil_2870 NC_011666.1 3157122 3158123 R PFAM: protein of unknown function DUF1311; KEGG: pla:Plav_3593 hypothetical protein; hypothetical protein complement(3157122..3158123) Methylocella silvestris BL2 7092786 YP_002363150.1 CDS Msil_2871 NC_011666.1 3158316 3159665 D KEGG: bid:Bind_1013 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase; phosphoribosylamine/glycine ligase 3158316..3159665 Methylocella silvestris BL2 7092787 YP_002363151.1 CDS Msil_2872 NC_011666.1 3159707 3160264 D PFAM: beta-Ig-H3/fasciclin; KEGG: fjo:Fjoh_2765 beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin 3159707..3160264 Methylocella silvestris BL2 7092788 YP_002363152.1 CDS Msil_2873 NC_011666.1 3160345 3160920 R TIGRFAM: methyltransferase; PFAM: putative RNA methylase; Protein of unknown function methylase putative; KEGG: met:M446_6054 methyltransferase; methyltransferase complement(3160345..3160920) Methylocella silvestris BL2 7092789 YP_002363153.1 CDS Msil_2874 NC_011666.1 3160926 3162956 R PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mex:Mext_3861 RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein complement(3160926..3162956) Methylocella silvestris BL2 7092790 YP_002363154.1 CDS Msil_2875 NC_011666.1 3163153 3163614 D KEGG: cak:Caul_4996 hypothetical protein; hypothetical protein 3163153..3163614 Methylocella silvestris BL2 7092791 YP_002363155.1 CDS Msil_2876 NC_011666.1 3163611 3164987 D Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase 3163611..3164987 Methylocella silvestris BL2 7092792 YP_002363156.1 CDS Msil_2877 NC_011666.1 3165010 3165396 R PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bid:Bind_0356 hypothetical protein; BFD (2Fe-2S)-binding domain-containing protein complement(3165010..3165396) Methylocella silvestris BL2 7092793 YP_002363157.1 CDS Msil_2878 NC_011666.1 3165631 3167511 R PFAM: tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: bja:blr3604 serine/threonine kinase; serine/threonine protein kinase complement(3165631..3167511) Methylocella silvestris BL2 7092794 YP_002363158.1 CDS Msil_2879 NC_011666.1 3167508 3168296 R PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: met:M446_0912 protein serine/threonine phosphatase; protein serine/threonine phosphatase complement(3167508..3168296) Methylocella silvestris BL2 7092795 YP_002363159.1 CDS Msil_2880 NC_011666.1 3168302 3168976 R TIGRFAM: type VI secretion-associated protein, BMA_A0400 family; KEGG: bja:blr3602 hypothetical protein; type VI secretion-associated protein complement(3168302..3168976) Methylocella silvestris BL2 7092796 YP_002363160.1 CDS Msil_2881 NC_011666.1 3168982 3172428 R TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bja:blr3601 hypothetical protein; type VI secretion protein IcmF complement(3168982..3172428) Methylocella silvestris BL2 7092797 YP_002363161.1 CDS Msil_2882 NC_011666.1 3172532 3174013 R TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein; PFAM: OmpA/MotB domain protein; KEGG: bja:blr3600 hypothetical protein; type VI secretion system OmpA/MotB family protein complement(3172532..3174013) Methylocella silvestris BL2 7092798 YP_002363162.1 CDS Msil_2883 NC_011666.1 3174104 3175729 R TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein; KEGG: bja:blr3598 hypothetical protein; FHA domain-containing protein complement(3174104..3175729) Methylocella silvestris BL2 7092799 YP_002363163.1 CDS Msil_2884 NC_011666.1 3176003 3179470 D PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: met:M446_0920 peptidase C14 caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 3176003..3179470 Methylocella silvestris BL2 7092800 YP_002363164.1 CDS Msil_2885 NC_011666.1 3179922 3181355 D PFAM: aminotransferase class-III; KEGG: bid:Bind_3215 aminotransferase class-III; class III aminotransferase 3179922..3181355 Methylocella silvestris BL2 7092802 YP_002363165.1 CDS rimM NC_011666.1 3181364 3181963 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 3181364..3181963 Methylocella silvestris BL2 7092803 YP_002363166.1 CDS Msil_2887 NC_011666.1 3182084 3182779 D KEGG: bid:Bind_3354 tRNA (guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 3182084..3182779 Methylocella silvestris BL2 7092804 YP_002363167.1 CDS Msil_2888 NC_011666.1 3182804 3184651 R PFAM: glycosyl transferase family 2; KEGG: bid:Bind_1064 glycosyl transferase family 2; family 2 glycosyl transferase complement(3182804..3184651) Methylocella silvestris BL2 7092805 YP_002363168.1 CDS Msil_2889 NC_011666.1 3185062 3185370 D KEGG: bra:BRADO4758 hypothetical protein; hypothetical protein 3185062..3185370 Methylocella silvestris BL2 7092806 YP_002363169.1 CDS Msil_2890 NC_011666.1 3185403 3186185 R PFAM: putative methyltransferase; KEGG: bid:Bind_1063 tRNA (guanine-N(7)-)-methyltransferase; tRNA (guanine-N(7)-)-methyltransferase complement(3185403..3186185) Methylocella silvestris BL2 7092807 YP_002363170.1 CDS Msil_2892 NC_011666.1 3187620 3188120 R PFAM: helix-turn-helix domain protein; KEGG: bid:Bind_1061 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(3187620..3188120) Methylocella silvestris BL2 7092809 YP_002363171.1 CDS Msil_2893 NC_011666.1 3188227 3189957 R TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mex:Mext_3208 apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(3188227..3189957) Methylocella silvestris BL2 7092810 YP_002363172.1 CDS Msil_2894 NC_011666.1 3190027 3191100 R PFAM: CBS domain containing protein; transporter-associated region; KEGG: bid:Bind_1058 CBS domain containing protein; hypothetical protein complement(3190027..3191100) Methylocella silvestris BL2 7092811 YP_002363173.1 CDS Msil_2895 NC_011666.1 3191103 3191633 R PFAM: protein of unknown function UPF0054; KEGG: bid:Bind_1057 protein of unknown function UPF0054; hypothetical protein complement(3191103..3191633) Methylocella silvestris BL2 7092812 YP_002363174.1 CDS Msil_2896 NC_011666.1 3191630 3192697 R PFAM: PhoH family protein; KEGG: bid:Bind_1056 PhoH family protein; PhoH family protein complement(3191630..3192697) Methylocella silvestris BL2 7092813 YP_002363175.1 CDS Msil_2897 NC_011666.1 3192694 3194166 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(3192694..3194166) Methylocella silvestris BL2 7092814 YP_002363176.1 CDS Msil_2898 NC_011666.1 3194289 3194780 R PFAM: GCN5-related N-acetyltransferase; KEGG: bid:Bind_1053 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3194289..3194780) Methylocella silvestris BL2 7092815 YP_002363177.1 CDS Msil_2899 NC_011666.1 3194777 3195481 R PFAM: peptidase M22 glycoprotease; KEGG: bid:Bind_1052 peptidase M22 glycoprotease; peptidase M22 glycoprotease complement(3194777..3195481) Methylocella silvestris BL2 7092816 YP_002363178.1 CDS Msil_2900 NC_011666.1 3195521 3196084 R PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: bid:Bind_1051 scaffold protein Nfu/NifU; Scaffold protein Nfu/NifU complement(3195521..3196084) Methylocella silvestris BL2 7092817 YP_002363179.1 CDS Msil_2901 NC_011666.1 3196241 3196597 R KEGG: nwi:Nwi_1933 putative porin; hypothetical protein complement(3196241..3196597) Methylocella silvestris BL2 7092818 YP_002363180.1 CDS Msil_2902 NC_011666.1 3196673 3197434 R PFAM: protein of unknown function DUF558; KEGG: mpo:Mpop_0826 protein of unknown function DUF558; hypothetical protein complement(3196673..3197434) Methylocella silvestris BL2 7092819 YP_002363181.1 CDS Msil_2903 NC_011666.1 3197677 3198126 D KEGG: bid:Bind_2248 hypothetical protein; hypothetical protein 3197677..3198126 Methylocella silvestris BL2 7092820 YP_002363182.1 CDS Msil_2904 NC_011666.1 3198123 3199112 D TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: bid:Bind_2247 4-hydroxybenzoate polyprenyl transferase; 4-hydroxybenzoate polyprenyltransferase 3198123..3199112 Methylocella silvestris BL2 7092821 YP_002363183.1 CDS Msil_2905 NC_011666.1 3199038 3201176 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rru:Rru_A2796 heavy metal translocatin P-type ATPase; heavy metal translocating P-type ATPase complement(3199038..3201176) Methylocella silvestris BL2 7092822 YP_002363184.1 CDS Msil_2906 NC_011666.1 3201186 3201572 R KEGG: rpe:RPE_3875 hypothetical protein; hypothetical protein complement(3201186..3201572) Methylocella silvestris BL2 7092823 YP_002363185.1 CDS Msil_2907 NC_011666.1 3201603 3201941 R hypothetical protein complement(3201603..3201941) Methylocella silvestris BL2 7092824 YP_002363186.1 CDS Msil_2908 NC_011666.1 3201985 3202290 R KEGG: rpc:RPC_3617 hypothetical protein; hypothetical protein complement(3201985..3202290) Methylocella silvestris BL2 7092825 YP_002363187.1 CDS Msil_2909 NC_011666.1 3202578 3203396 R KEGG: bid:Bind_2245 hypothetical protein; hypothetical protein complement(3202578..3203396) Methylocella silvestris BL2 7092826 YP_002363188.1 CDS Msil_2910 NC_011666.1 3203478 3204893 R TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid complement(3203478..3204893) Methylocella silvestris BL2 7092827 YP_002363189.1 CDS Msil_2911 NC_011666.1 3204917 3206317 R PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: bid:Bind_2186 multicopper oxidase type 3; multicopper oxidase type 3 complement(3204917..3206317) Methylocella silvestris BL2 7092828 YP_002363190.1 CDS tig NC_011666.1 3206718 3208106 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 3206718..3208106 Methylocella silvestris BL2 7092830 YP_002363191.1 CDS Msil_2913 NC_011666.1 3208296 3208943 D PFAM: peptidase S14 ClpP; KEGG: bid:Bind_2184 endopeptidase Clp; endopeptidase Clp 3208296..3208943 Methylocella silvestris BL2 7092831 YP_002363192.1 CDS Msil_2914 NC_011666.1 3209508 3210773 D KEGG: bid:Bind_2183 ATP-dependent Clp protease, ATP-binding subunit ClpX; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: AAA ATPase central domain protein; zinc finger C4 domain protein; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding subunit ClpX 3209508..3210773 Methylocella silvestris BL2 7092832 YP_002363193.1 CDS Msil_2915 NC_011666.1 3211084 3213501 D KEGG: bid:Bind_2182 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 3211084..3213501 Methylocella silvestris BL2 7092833 YP_002363194.1 CDS Msil_2916 NC_011666.1 3214062 3214499 D PFAM: protein of unknown function DUF29; KEGG: acr:Acry_3636 protein of unknown function DUF29; hypothetical protein 3214062..3214499 Methylocella silvestris BL2 7092835 YP_002363195.1 CDS Msil_2917 NC_011666.1 3214700 3216049 D TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: mex:Mext_3343 xanthine permease; xanthine permease 3214700..3216049 Methylocella silvestris BL2 7092836 YP_002363196.1 CDS Msil_2918 NC_011666.1 3216537 3216902 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: bid:Bind_2399 NADH-ubiquinone/plastoquinone oxidoreductase chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 3216537..3216902 Methylocella silvestris BL2 7092838 YP_002363197.1 CDS Msil_2919 NC_011666.1 3216893 3217456 D KEGG: mex:Mext_1084 NADH-quinone oxidoreductase, B subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; NADH-quinone oxidoreductase subunit B 3216893..3217456 Methylocella silvestris BL2 7092839 YP_002363198.1 CDS Msil_2920 NC_011666.1 3217659 3218273 D KEGG: bid:Bind_2397 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH (or F420H2) dehydrogenase subunit C 3217659..3218273 Methylocella silvestris BL2 7092840 YP_002363199.1 CDS Msil_2921 NC_011666.1 3218320 3219504 D KEGG: bid:Bind_2396 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase I subunit D 3218320..3219504 Methylocella silvestris BL2 7092841 YP_002363200.1 CDS Msil_2922 NC_011666.1 3219568 3220362 D KEGG: bid:Bind_2395 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH-quinone oxidoreductase subunit E 3219568..3220362 Methylocella silvestris BL2 7092842 YP_002363201.1 CDS Msil_2923 NC_011666.1 3220374 3221684 D part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 3220374..3221684 Methylocella silvestris BL2 7092843 YP_002363202.1 CDS Msil_2924 NC_011666.1 3221748 3223811 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 3221748..3223811 Methylocella silvestris BL2 7092844 YP_002363203.1 CDS Msil_2925 NC_011666.1 3223816 3224844 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 3223816..3224844 Methylocella silvestris BL2 7092845 YP_002363204.1 CDS Msil_2926 NC_011666.1 3224879 3225367 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 3224879..3225367 Methylocella silvestris BL2 7092846 YP_002363205.1 CDS Msil_2927 NC_011666.1 3225468 3226073 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: bid:Bind_2389 NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 3225468..3226073 Methylocella silvestris BL2 7092847 YP_002363206.1 CDS Msil_2928 NC_011666.1 3226138 3226446 D PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: bid:Bind_2388 NADH-ubiquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase chain 4L 3226138..3226446 Methylocella silvestris BL2 7092848 YP_002363207.1 CDS Msil_2929 NC_011666.1 3226451 3228496 D KEGG: bid:Bind_2387 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L 3226451..3228496 Methylocella silvestris BL2 7092849 YP_002363208.1 CDS Msil_2930 NC_011666.1 3228496 3230007 D KEGG: bid:Bind_2386 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 3228496..3230007 Methylocella silvestris BL2 7092850 YP_002363209.1 CDS Msil_2931 NC_011666.1 3230083 3231516 D TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: bid:Bind_2385 proton-translocating NADH-quinone oxidoreductase, chain N; proton-translocating NADH-quinone oxidoreductase subunit N 3230083..3231516 Methylocella silvestris BL2 7092851 YP_002363210.1 CDS Msil_2932 NC_011666.1 3231620 3232399 D TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: bid:Bind_2384 biotin--acetyl-CoA-carboxylase ligase; biotin--acetyl-CoA-carboxylase ligase 3231620..3232399 Methylocella silvestris BL2 7092852 YP_002363211.1 CDS Msil_2933 NC_011666.1 3232437 3234107 D PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: bid:Bind_2383 beta-lactamase domain protein; beta-lactamase domain-containing protein 3232437..3234107 Methylocella silvestris BL2 7092853 YP_002363212.1 CDS Msil_2934 NC_011666.1 3234185 3234589 D KEGG: rsq:Rsph17025_0368 methylmalonyl-CoA epimerase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; methylmalonyl-CoA epimerase 3234185..3234589 Methylocella silvestris BL2 7092854 YP_002363213.1 CDS Msil_2935 NC_011666.1 3234656 3234991 R hypothetical protein complement(3234656..3234991) Methylocella silvestris BL2 7092855 YP_002363214.1 CDS Msil_2936 NC_011666.1 3235263 3238331 D KEGG: rba:RB4444 hypothetical protein; hypothetical protein 3235263..3238331 Methylocella silvestris BL2 7092856 YP_002363215.1 CDS Msil_2937 NC_011666.1 3238865 3239398 R PFAM: Phenolic acid decarboxylase; KEGG: met:M446_5254 phenolic acid decarboxylase; Phenolic acid decarboxylase complement(3238865..3239398) Methylocella silvestris BL2 7092858 YP_002363216.1 CDS Msil_2938 NC_011666.1 3239382 3239531 R KEGG: smd:Smed_4000 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; hypothetical protein complement(3239382..3239531) Methylocella silvestris BL2 7092859 YP_002363217.1 CDS Msil_2939 NC_011666.1 3239885 3240271 R SMART: regulatory protein LuxR; KEGG: nar:Saro_1052 regulatory protein, LuxR; LuxR family transcriptional regulator complement(3239885..3240271) Methylocella silvestris BL2 7092860 YP_002363218.1 CDS Msil_2940 NC_011666.1 3240473 3241054 R KEGG: bav:BAV0076 transcriptional regulator; hypothetical protein complement(3240473..3241054) Methylocella silvestris BL2 7092861 YP_002363219.1 CDS Msil_2941 NC_011666.1 3241301 3242887 D catalyzes the formation of benzaldehyde from benzoylformate; benzoylformate decarboxylase 3241301..3242887 Methylocella silvestris BL2 7092862 YP_002363220.1 CDS Msil_2945 NC_011666.1 3246291 3247283 R PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_5011 putative alpha/beta hydrolase; alpha/beta hydrolase fold protein complement(3246291..3247283) Methylocella silvestris BL2 7093195 YP_002363221.1 CDS Msil_2947 NC_011666.1 3247797 3249443 R PFAM: Na+/Picotransporter; KEGG: bid:Bind_2510 Na+/Picotransporter; Na+/Picotransporter complement(3247797..3249443) Methylocella silvestris BL2 7093440 YP_002363222.1 CDS Msil_2949 NC_011666.1 3250078 3251226 R PFAM: ABC-2 type transporter; KEGG: bid:Bind_0811 ABC-2 type transporter; ABC-2 type transporter complement(3250078..3251226) Methylocella silvestris BL2 7093442 YP_002363223.1 CDS Msil_2950 NC_011666.1 3251242 3254073 R PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: bid:Bind_0810 ABC transporter related; ABC transporter-like protein complement(3251242..3254073) Methylocella silvestris BL2 7093443 YP_002363224.1 CDS Msil_2951 NC_011666.1 3254070 3255167 R PFAM: secretion protein HlyD family protein; KEGG: bid:Bind_0809 secretion protein HlyD family protein; secretion protein HlyD family protein complement(3254070..3255167) Methylocella silvestris BL2 7093444 YP_002363225.1 CDS Msil_2952 NC_011666.1 3256035 3256247 R hypothetical protein complement(3256035..3256247) Methylocella silvestris BL2 7093445 YP_002363226.1 CDS Msil_2953 NC_011666.1 3256600 3258732 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: met:M446_6804 molybdopterin oxidoreductase; Formate dehydrogenase 3256600..3258732 Methylocella silvestris BL2 7093446 YP_002363227.1 CDS Msil_2954 NC_011666.1 3258883 3259767 R KEGG: bid:Bind_0127 hypothetical protein; hypothetical protein complement(3258883..3259767) Methylocella silvestris BL2 7093447 YP_002363228.1 CDS Msil_2955 NC_011666.1 3260184 3262088 D KEGG: bid:Bind_0128 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; chaperone protein DnaK 3260184..3262088 Methylocella silvestris BL2 7093448 YP_002363229.1 CDS Msil_2956 NC_011666.1 3262443 3263591 D TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: bid:Bind_0129 chaperone protein DnaJ; chaperone protein DnaJ 3262443..3263591 Methylocella silvestris BL2 7093449 YP_002363230.1 CDS Msil_2957 NC_011666.1 3263735 3264589 D PFAM: ribosomal RNA adenine methylase transferase; Methyltransferase type 12; KEGG: bid:Bind_0130 ribosomal RNA adenine methylase transferase; type 12 methyltransferase 3263735..3264589 Methylocella silvestris BL2 7093450 YP_002363231.1 CDS Msil_2958 NC_011666.1 3264586 3265320 D KEGG: bid:Bind_0131 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 3264586..3265320 Methylocella silvestris BL2 7093451 YP_002363232.1 CDS Msil_2959 NC_011666.1 3265333 3266151 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 3265333..3266151 Methylocella silvestris BL2 7093452 YP_002363233.1 CDS Msil_2960 NC_011666.1 3266307 3266567 R hypothetical protein complement(3266307..3266567) Methylocella silvestris BL2 7093453 YP_002363234.1 CDS Msil_2961 NC_011666.1 3266900 3268102 D PFAM: aminotransferase class I and II; KEGG: bid:Bind_0079 aminotransferase class I and II; class I and II aminotransferase 3266900..3268102 Methylocella silvestris BL2 7093454 YP_002363235.1 CDS Msil_2962 NC_011666.1 3268222 3268623 D KEGG: bid:Bind_0467 hypothetical protein; hypothetical protein 3268222..3268623 Methylocella silvestris BL2 7093455 YP_002363236.1 CDS Msil_2963 NC_011666.1 3268602 3269243 R KEGG: mpo:Mpop_2355 hypothetical protein; hypothetical protein complement(3268602..3269243) Methylocella silvestris BL2 7093456 YP_002363237.1 CDS Msil_2964 NC_011666.1 3269518 3270099 D KEGG: bid:Bind_0757 DedA family; DedA family 3269518..3270099 Methylocella silvestris BL2 7093457 YP_002363238.1 CDS Msil_2965 NC_011666.1 3270107 3270622 D KEGG: bid:Bind_0758 hypothetical protein; hypothetical protein 3270107..3270622 Methylocella silvestris BL2 7093458 YP_002363239.1 CDS Msil_2966 NC_011666.1 3270588 3271787 R TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: bid:Bind_0759 radical SAM enzyme, Cfr family; radical SAM enzyme, Cfr family complement(3270588..3271787) Methylocella silvestris BL2 7093459 YP_002363240.1 CDS Msil_2967 NC_011666.1 3271909 3272661 D PFAM: protein of unknown function DUF541; KEGG: bid:Bind_0760 protein of unknown function DUF541; hypothetical protein 3271909..3272661 Methylocella silvestris BL2 7093460 YP_002363241.1 CDS Msil_2968 NC_011666.1 3272667 3273566 R PFAM: Methyltransferase type 11; KEGG: bid:Bind_1136 methyltransferase type 11; type 11 methyltransferase complement(3272667..3273566) Methylocella silvestris BL2 7093461 YP_002363242.1 CDS Msil_2969 NC_011666.1 3273733 3274440 D KEGG: bid:Bind_1142 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 3273733..3274440 Methylocella silvestris BL2 7093462 YP_002363243.1 CDS Msil_2970 NC_011666.1 3274469 3275131 D KEGG: bid:Bind_1141 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 3274469..3275131 Methylocella silvestris BL2 7093463 YP_002363244.1 CDS Msil_2971 NC_011666.1 3275138 3275944 R KEGG: bid:Bind_1140 phosphoribosyltransferase; phosphoribosyltransferase complement(3275138..3275944) Methylocella silvestris BL2 7093464 YP_002363245.1 CDS Msil_2972 NC_011666.1 3275941 3276783 R PFAM: aminotransferase class IV; KEGG: mrd:Mrad2831_1636 aminotransferase class IV; class IV aminotransferase complement(3275941..3276783) Methylocella silvestris BL2 7093465 YP_002363246.1 CDS Msil_2973 NC_011666.1 3276917 3277552 R PFAM: regulatory protein TetR; KEGG: rpt:Rpal_3941 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3276917..3277552) Methylocella silvestris BL2 7093466 YP_002363247.1 CDS Msil_2974 NC_011666.1 3277741 3278031 R KEGG: pde:Pden_2611 putative transcriptional regulator, XRE family; hypothetical protein complement(3277741..3278031) Methylocella silvestris BL2 7093467 YP_002363248.1 CDS Msil_2975 NC_011666.1 3278461 3279234 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 3278461..3279234 Methylocella silvestris BL2 7093468 YP_002363249.1 CDS Msil_2976 NC_011666.1 3279294 3281672 D KEGG: rpe:RPE_3161 hypothetical protein; hypothetical protein 3279294..3281672 Methylocella silvestris BL2 7093469 YP_002363250.1 CDS Msil_2977 NC_011666.1 3281669 3283081 D PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: rpe:RPE_3163 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 3281669..3283081 Methylocella silvestris BL2 7093470 YP_002363251.1 CDS Msil_2978 NC_011666.1 3283078 3284292 D TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: bra:BRADO1872 propionate kinase/acetate kinase C, anaerobic; acetate kinase 3283078..3284292 Methylocella silvestris BL2 7093471 YP_002363252.1 CDS Msil_2979 NC_011666.1 3284441 3284965 D KEGG: rpa:RPA3309 hypothetical protein; hypothetical protein 3284441..3284965 Methylocella silvestris BL2 7093472 YP_002363253.1 CDS Msil_2980 NC_011666.1 3284995 3286671 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: bpy:Bphyt_5881 sulphate transporter; sulfate transporter complement(3284995..3286671) Methylocella silvestris BL2 7093473 YP_002363254.1 CDS Msil_2981 NC_011666.1 3286746 3287729 R PFAM: Asparaginase/glutaminase; KEGG: mpo:Mpop_0827 asparaginase/glutaminase; asparaginase complement(3286746..3287729) Methylocella silvestris BL2 7093474 YP_002363255.1 CDS rpsP NC_011666.1 3287823 3288191 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(3287823..3288191) Methylocella silvestris BL2 7093475 YP_002363256.1 CDS Msil_2983 NC_011666.1 3288264 3289886 R KEGG: bid:Bind_3351 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein complement(3288264..3289886) Methylocella silvestris BL2 7093476 YP_002363257.1 CDS Msil_2984 NC_011666.1 3290523 3292118 D TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bid:Bind_0582 Na+/H+ antiporter; Na+/H+ antiporter 3290523..3292118 Methylocella silvestris BL2 7093478 YP_002363258.1 CDS Msil_2985 NC_011666.1 3292923 3294197 D PFAM: major facilitator superfamily MFS_1; KEGG: bid:Bind_3390 major facilitator superfamily MFS_1; major facilitator superfamily protein 3292923..3294197 Methylocella silvestris BL2 7093479 YP_002363259.1 CDS Msil_2986 NC_011666.1 3294217 3295875 D unknown function; putative glutamate synthase (NADPH) small subunit 3294217..3295875 Methylocella silvestris BL2 7093480 YP_002363260.1 CDS Msil_2987 NC_011666.1 3295872 3299525 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: pzu:PHZ_p0134 pyruvate:ferredoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 3295872..3299525 Methylocella silvestris BL2 7093481 YP_002363261.1 CDS Msil_2988 NC_011666.1 3299535 3300548 D PFAM: dihydroorotate dehydrogenase; KEGG: mca:MCA0768 dihydroorotate dehydrogenase 2; dihydroorotate dehydrogenase 3299535..3300548 Methylocella silvestris BL2 7093482 YP_002363262.1 CDS rpsM NC_011666.1 3301564 3301932 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 3301564..3301932 Methylocella silvestris BL2 7093484 YP_002363263.1 CDS Msil_2990 NC_011666.1 3302012 3302401 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 3302012..3302401 Methylocella silvestris BL2 7093485 YP_002363264.1 CDS Msil_2991 NC_011666.1 3302545 3303561 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 3302545..3303561 Methylocella silvestris BL2 7093486 YP_002363265.1 CDS rplQ NC_011666.1 3303662 3304090 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 3303662..3304090 Methylocella silvestris BL2 7093487 YP_002363266.1 CDS Msil_2993 NC_011666.1 3304239 3305669 D KEGG: bid:Bind_2041 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; protease Do 3304239..3305669 Methylocella silvestris BL2 7093488 YP_002363267.1 CDS Msil_2994 NC_011666.1 3305718 3307031 D PFAM: magnesium chelatase ChlI subunit; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bid:Bind_2042 AAA ATPase central domain protein; ATPase AAA 3305718..3307031 Methylocella silvestris BL2 7093489 YP_002363268.1 CDS Msil_2995 NC_011666.1 3307059 3307655 R TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: bid:Bind_0428 polyhydroxyalkonate synthesis repressor, PhaR; polyhydroxyalkonate synthesis repressor PhaR complement(3307059..3307655) Methylocella silvestris BL2 7093490 YP_002363269.1 CDS Msil_2996 NC_011666.1 3308044 3309216 D KEGG: rec:RHECIAT_CH0004306 acetyl-CoA acetyltransferase protein; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 3308044..3309216 Methylocella silvestris BL2 7093491 YP_002363270.1 CDS Msil_2997 NC_011666.1 3309402 3310127 D TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bid:Bind_0426 acetoacetyl-CoA reductase; acetoacetyl-CoA reductase 3309402..3310127 Methylocella silvestris BL2 7093492 YP_002363271.1 CDS Msil_2998 NC_011666.1 3310252 3312078 D KEGG: bid:Bind_2458 hypothetical protein; hypothetical protein 3310252..3312078 Methylocella silvestris BL2 7093493 YP_002363272.1 CDS Msil_2999 NC_011666.1 3312191 3314020 R PFAM: thiamine biosynthesis protein ThiC; KEGG: bid:Bind_0063 thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC complement(3312191..3314020) Methylocella silvestris BL2 7093494 YP_002363273.1 CDS Msil_3000 NC_011666.1 3314359 3315876 D KEGG: cak:Caul_5056 succinate CoA transferase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase; succinate CoA transferase 3314359..3315876 Methylocella silvestris BL2 7093495 YP_002363274.1 CDS Msil_3001 NC_011666.1 3315873 3316310 D PFAM: CMP/dCMP deaminase zinc-binding; KEGG: ava:Ava_2029 cytidine/deoxycytidylate deaminase, zinc-binding region; CMP/dCMP deaminase 3315873..3316310 Methylocella silvestris BL2 7093496 YP_002363275.1 CDS Msil_3002 NC_011666.1 3316381 3317388 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: psa:PST_2871 alcohol dehydrogenase, zinc-containing; alcohol dehydrogenase zinc-binding domain-containing protein 3316381..3317388 Methylocella silvestris BL2 7093497 YP_002363276.1 CDS Msil_3003 NC_011666.1 3317423 3318136 R PFAM: LrgB family protein; KEGG: bbt:BBta_1100 putative inner membrane protein YohK; LrgB family protein complement(3317423..3318136) Methylocella silvestris BL2 7093498 YP_002363277.1 CDS Msil_3004 NC_011666.1 3318133 3318525 R PFAM: LrgA family protein; KEGG: rpt:Rpal_0545 LrgA family protein; LrgA family protein complement(3318133..3318525) Methylocella silvestris BL2 7093499 YP_002363278.1 CDS Msil_3005 NC_011666.1 3318800 3319195 D KEGG: bpm:BURPS1710b_A0288 putative lipoprotein; putative lipoprotein 3318800..3319195 Methylocella silvestris BL2 7093500 YP_002363279.1 CDS Msil_3006 NC_011666.1 3319291 3319569 R hypothetical protein complement(3319291..3319569) Methylocella silvestris BL2 7093501 YP_002363280.1 CDS Msil_3007 NC_011666.1 3320002 3320826 R PFAM: protein of unknown function DUF155; KEGG: nha:Nham_0703 protein of unknown function DUF155; hypothetical protein complement(3320002..3320826) Methylocella silvestris BL2 7093502 YP_002363281.1 CDS Msil_3008 NC_011666.1 3321023 3321769 R TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: met:M446_3414 haloacid dehalogenase, type II; haloacid dehalogenase complement(3321023..3321769) Methylocella silvestris BL2 7093503 YP_002363282.1 CDS Msil_3009 NC_011666.1 3322095 3323852 D TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bid:Bind_2420 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit 3322095..3323852 Methylocella silvestris BL2 7093504 YP_002363283.1 CDS Msil_3010 NC_011666.1 3323858 3324421 D TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; acetolactate synthase small subunit; KEGG: bid:Bind_2419 acetolactate synthase, small subunit; acetolactate synthase small subunit 3323858..3324421 Methylocella silvestris BL2 7093505 YP_002363284.1 CDS Msil_3011 NC_011666.1 3324528 3325547 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 3324528..3325547 Methylocella silvestris BL2 7093506 YP_002363285.1 CDS Msil_3012 NC_011666.1 3325612 3326025 D hypothetical protein 3325612..3326025 Methylocella silvestris BL2 7093507 YP_002363286.1 CDS Msil_3013 NC_011666.1 3326220 3327149 R KEGG: bid:Bind_1462 hypothetical protein; hypothetical protein complement(3326220..3327149) Methylocella silvestris BL2 7093508 YP_002363287.1 CDS Msil_3014 NC_011666.1 3327290 3327565 R hypothetical protein complement(3327290..3327565) Methylocella silvestris BL2 7093509 YP_002363288.1 CDS Msil_3015 NC_011666.1 3327565 3328563 R KEGG: bid:Bind_1462 hypothetical protein; hypothetical protein complement(3327565..3328563) Methylocella silvestris BL2 7093510 YP_002363289.1 CDS Msil_3016 NC_011666.1 3328813 3330405 R TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: bid:Bind_1193 peptide chain release factor 3; peptide chain release factor 3 complement(3328813..3330405) Methylocella silvestris BL2 7093511 YP_002363290.1 CDS Msil_3017 NC_011666.1 3330575 3331009 D PFAM: Protein of unknown function DUF1810; KEGG: pzu:PHZ_c3035 hypothetical protein; hypothetical protein 3330575..3331009 Methylocella silvestris BL2 7093512 YP_002363291.1 CDS Msil_3018 NC_011666.1 3331019 3331831 R KEGG: bid:Bind_0125 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: protein of unknown function UPF0031; phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase complement(3331019..3331831) Methylocella silvestris BL2 7093513 YP_002363292.1 CDS Msil_3019 NC_011666.1 3331864 3332379 R KEGG: mex:Mext_2338 hypothetical protein; hypothetical protein complement(3331864..3332379) Methylocella silvestris BL2 7093514 YP_002363293.1 CDS Msil_3020 NC_011666.1 3332453 3333451 R SMART: WD-40 repeat protein; KEGG: bid:Bind_3116 WD-40 repeat protein; WD-40 repeat-containing protein complement(3332453..3333451) Methylocella silvestris BL2 7093515 YP_002363294.1 CDS Msil_3021 NC_011666.1 3333484 3334560 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bid:Bind_3663 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K complement(3333484..3334560) Methylocella silvestris BL2 7093516 YP_002363295.1 CDS Msil_3023 NC_011666.1 3335380 3336264 R PFAM: extracellular solute-binding protein family 3; KEGG: bid:Bind_0266 extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein complement(3335380..3336264) Methylocella silvestris BL2 7093518 YP_002363296.1 CDS Msil_3024 NC_011666.1 3336280 3337797 D TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bid:Bind_0267 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 3336280..3337797 Methylocella silvestris BL2 7093519 YP_002363297.1 CDS Msil_3025 NC_011666.1 3337890 3339215 D KEGG: bid:Bind_3430 TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor, TAXI family 3337890..3339215 Methylocella silvestris BL2 7093113 YP_002363298.1 CDS Msil_3026 NC_011666.1 3339371 3340213 R KEGG: syn:ssl1792 hypothetical protein; hypothetical protein complement(3339371..3340213) Methylocella silvestris BL2 7092703 YP_002363299.1 CDS Msil_3027 NC_011666.1 3340495 3341847 R TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: xau:Xaut_1234 gluconate transporter; gluconate transporter complement(3340495..3341847) Methylocella silvestris BL2 7092704 YP_002363300.1 CDS Msil_3028 NC_011666.1 3341851 3342441 R TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: xau:Xaut_1235 carbohydrate kinase; thermoresistant glucokinase family carbohydrate kinase complement(3341851..3342441) Methylocella silvestris BL2 7092705 YP_002363301.1 CDS Msil_3029 NC_011666.1 3342841 3344658 D TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: bid:Bind_0454 GTP-binding protein TypA; GTP-binding protein TypA 3342841..3344658 Methylocella silvestris BL2 7092706 YP_002363302.1 CDS Msil_3030 NC_011666.1 3344679 3345671 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 3344679..3345671 Methylocella silvestris BL2 7092707 YP_002363303.1 CDS Msil_3031 NC_011666.1 3345691 3346143 R PFAM: transcriptional regulator PadR family protein; KEGG: rru:Rru_A3441 PadR family transcriptional regulator; PadR family transcriptional regulator complement(3345691..3346143) Methylocella silvestris BL2 7092708 YP_002363304.1 CDS Msil_3032 NC_011666.1 3346503 3347252 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bid:Bind_0453 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 3346503..3347252 Methylocella silvestris BL2 7092709 YP_002363305.1 CDS Msil_3033 NC_011666.1 3347320 3348198 R Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase complement(3347320..3348198) Methylocella silvestris BL2 7092710 YP_002363306.1 CDS Msil_3034 NC_011666.1 3348301 3348402 D hypothetical protein 3348301..3348402 Methylocella silvestris BL2 7092711 YP_002363307.1 CDS Msil_3035 NC_011666.1 3348438 3349601 D KEGG: bid:Bind_0451 ceramide glucosyltransferase; ceramide glucosyltransferase 3348438..3349601 Methylocella silvestris BL2 7092712 YP_002363308.1 CDS Msil_3036 NC_011666.1 3349623 3350291 R PFAM: fatty acid hydroxylase; KEGG: bid:Bind_0449 fatty acid hydroxylase; fatty acid hydroxylase complement(3349623..3350291) Methylocella silvestris BL2 7092713 YP_002363309.1 CDS Msil_3037 NC_011666.1 3350491 3351462 R TIGRFAM: methyltransferase; KEGG: met:M446_2254 hypothetical protein; methyltransferase complement(3350491..3351462) Methylocella silvestris BL2 7092714 YP_002363310.1 CDS Msil_3038 NC_011666.1 3351462 3352751 R PFAM: protein of unknown function DUF323; KEGG: pzu:PHZ_c1906 hypothetical protein; hypothetical protein complement(3351462..3352751) Methylocella silvestris BL2 7092715 YP_002363311.1 CDS Msil_3039 NC_011666.1 3352984 3353307 R hypothetical protein complement(3352984..3353307) Methylocella silvestris BL2 7092716 YP_002363312.1 CDS Msil_3040 NC_011666.1 3353397 3354032 R PFAM: peptidase S24 and S26 domain protein; KEGG: mes:Meso_1193 putative phage repressor; putative phage repressor complement(3353397..3354032) Methylocella silvestris BL2 7092717 YP_002363313.1 CDS Msil_3041 NC_011666.1 3354149 3354490 D KEGG: bid:Bind_0631 hypothetical protein; hypothetical protein 3354149..3354490 Methylocella silvestris BL2 7092718 YP_002363314.1 CDS Msil_3042 NC_011666.1 3354493 3355008 D KEGG: bid:Bind_3173 hypothetical protein; hypothetical protein 3354493..3355008 Methylocella silvestris BL2 7092719 YP_002363315.1 CDS Msil_3043 NC_011666.1 3356107 3357414 D PFAM: protein of unknown function DUF264; KEGG: bid:Bind_0633 protein of unknown function DUF264; hypothetical protein 3356107..3357414 Methylocella silvestris BL2 7092720 YP_002363316.1 CDS Msil_3044 NC_011666.1 3357458 3358807 D KEGG: bid:Bind_0634 conserved hypothetical protein, putative phage associated protein; hypothetical protein 3357458..3358807 Methylocella silvestris BL2 7092721 YP_002363317.1 CDS Msil_3045 NC_011666.1 3358881 3359966 D KEGG: bid:Bind_0635 hypothetical protein; hypothetical protein 3358881..3359966 Methylocella silvestris BL2 7092722 YP_002363318.1 CDS Msil_3046 NC_011666.1 3360135 3361649 D KEGG: bid:Bind_0636 conserved hypothetical protein, putative phage associated protein; hypothetical protein 3360135..3361649 Methylocella silvestris BL2 7092723 YP_002363319.1 CDS Msil_3047 NC_011666.1 3362242 3363060 D KEGG: bid:Bind_0638 hypothetical protein; hypothetical protein 3362242..3363060 Methylocella silvestris BL2 7092724 YP_002363320.1 CDS Msil_3048 NC_011666.1 3363057 3363503 D KEGG: hsm:HSM_0669 phage virion morphogenesis protein; hypothetical protein 3363057..3363503 Methylocella silvestris BL2 7092725 YP_002363321.1 CDS Msil_3049 NC_011666.1 3363532 3363978 D KEGG: bid:Bind_0640 hypothetical protein; hypothetical protein 3363532..3363978 Methylocella silvestris BL2 7092726 YP_002363322.1 CDS Msil_3050 NC_011666.1 3364041 3364778 D KEGG: bid:Bind_0641 hypothetical protein; hypothetical protein 3364041..3364778 Methylocella silvestris BL2 7092727 YP_002363323.1 CDS Msil_3051 NC_011666.1 3364778 3365083 D KEGG: bid:Bind_0642 hypothetical protein; hypothetical protein 3364778..3365083 Methylocella silvestris BL2 7092728 YP_002363324.1 CDS Msil_3052 NC_011666.1 3365182 3365382 D hypothetical protein 3365182..3365382 Methylocella silvestris BL2 7092729 YP_002363325.1 CDS Msil_3053 NC_011666.1 3365451 3366713 D KEGG: bid:Bind_0643 hypothetical protein; hypothetical protein 3365451..3366713 Methylocella silvestris BL2 7092730 YP_002363326.1 CDS Msil_3054 NC_011666.1 3366718 3368982 D KEGG: bid:Bind_2728 hypothetical protein; hypothetical protein 3366718..3368982 Methylocella silvestris BL2 7092731 YP_002363327.1 CDS Msil_3055 NC_011666.1 3368979 3369587 D KEGG: bid:Bind_2727 conserved hypothetical protein, putative phage associated protein; hypothetical protein 3368979..3369587 Methylocella silvestris BL2 7092732 YP_002363328.1 CDS Msil_3056 NC_011666.1 3369584 3370450 D PFAM: conserved hypothetical protein; KEGG: bid:Bind_2726 hypothetical protein; hypothetical protein 3369584..3370450 Methylocella silvestris BL2 7092733 YP_002363329.1 CDS Msil_3057 NC_011666.1 3370453 3370911 D KEGG: bid:Bind_2725 conserved hypothetical protein, putative phage associated protein; hypothetical protein 3370453..3370911 Methylocella silvestris BL2 7092734 YP_002363330.1 CDS Msil_3058 NC_011666.1 3370908 3373043 D KEGG: bid:Bind_2724 conserved hypothetical protein, putative phage associated protein; hypothetical protein 3370908..3373043 Methylocella silvestris BL2 7092735 YP_002363331.1 CDS Msil_3059 NC_011666.1 3373040 3373963 D KEGG: mes:Meso_2767 hypothetical protein; hypothetical protein 3373040..3373963 Methylocella silvestris BL2 7092736 YP_002363332.1 CDS Msil_3060 NC_011666.1 3374042 3374515 D KEGG: bid:Bind_2132 hypothetical protein; hypothetical protein 3374042..3374515 Methylocella silvestris BL2 7092737 YP_002363333.1 CDS Msil_3061 NC_011666.1 3374530 3375537 D KEGG: pan:PODANSg3174 hypothetical protein; hypothetical protein 3374530..3375537 Methylocella silvestris BL2 7092738 YP_002363334.1 CDS Msil_3062 NC_011666.1 3375542 3376801 D KEGG: rme:Rmet_5029 lipolytic enzyme, G-D-S-L; hypothetical protein 3375542..3376801 Methylocella silvestris BL2 7092739 YP_002363335.1 CDS Msil_3063 NC_011666.1 3376912 3377694 D PFAM: protein of unknown function DUF847; KEGG: bid:Bind_3374 protein of unknown function DUF847; hypothetical protein 3376912..3377694 Methylocella silvestris BL2 7092740 YP_002363336.1 CDS Msil_3064 NC_011666.1 3377716 3378084 D KEGG: bid:Bind_3373 hypothetical protein; hypothetical protein 3377716..3378084 Methylocella silvestris BL2 7092741 YP_002363337.1 CDS Msil_3065 NC_011666.1 3378081 3378533 D KEGG: bid:Bind_3372 hypothetical protein; hypothetical protein 3378081..3378533 Methylocella silvestris BL2 7092742 YP_002363338.1 CDS Msil_3066 NC_011666.1 3378537 3378764 D hypothetical protein 3378537..3378764 Methylocella silvestris BL2 7092743 YP_002363339.1 CDS Msil_3067 NC_011666.1 3378751 3379035 D hypothetical protein 3378751..3379035 Methylocella silvestris BL2 7092744 YP_002363340.1 CDS Msil_3068 NC_011666.1 3379361 3381127 D PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; MOSC domain containing protein; Oxidoreductase FAD-binding domain protein; KEGG: rle:pRL110471 putative flavoprotein/ferredoxin; MOSC domain-containing protein 3379361..3381127 Methylocella silvestris BL2 7092745 YP_002363341.1 CDS Msil_3070 NC_011666.1 3381789 3383090 D PFAM: histidinol dehydrogenase; KEGG: bid:Bind_0668 histidinol dehydrogenase; histidinol dehydrogenase 3381789..3383090 Methylocella silvestris BL2 7092747 YP_002363342.1 CDS Msil_3071 NC_011666.1 3383087 3383575 D PFAM: conserved hypothetical protein; KEGG: bid:Bind_0667 hypothetical protein; hypothetical protein 3383087..3383575 Methylocella silvestris BL2 7092748 YP_002363343.1 CDS Msil_3072 NC_011666.1 3383616 3384071 D PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: bid:Bind_0666 protein tyrosine phosphatase; protein-tyrosine phosphatase 3383616..3384071 Methylocella silvestris BL2 7092749 YP_002363344.1 CDS Msil_3073 NC_011666.1 3384152 3385963 D TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: bid:Bind_1563 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 3384152..3385963 Methylocella silvestris BL2 7092750 YP_002363345.1 CDS Msil_3074 NC_011666.1 3386324 3386584 D KEGG: rpc:RPC_1783 hypothetical protein; hypothetical protein 3386324..3386584 Methylocella silvestris BL2 7092752 YP_002363346.1 CDS Msil_3075 NC_011666.1 3386690 3386857 D hypothetical protein 3386690..3386857 Methylocella silvestris BL2 7092753 YP_002363347.1 CDS Msil_3076 NC_011666.1 3387249 3387575 R hypothetical protein complement(3387249..3387575) Methylocella silvestris BL2 7092754 YP_002363348.1 CDS Msil_3077 NC_011666.1 3387579 3387827 R hypothetical protein complement(3387579..3387827) Methylocella silvestris BL2 7092755 YP_002363349.1 CDS Msil_3078 NC_011666.1 3387827 3388294 R hypothetical protein complement(3387827..3388294) Methylocella silvestris BL2 7092756 YP_002363350.1 CDS Msil_3079 NC_011666.1 3388377 3388643 D KEGG: xau:Xaut_3428 hypothetical protein; hypothetical protein 3388377..3388643 Methylocella silvestris BL2 7092757 YP_002363351.1 CDS Msil_3080 NC_011666.1 3388670 3388882 D hypothetical protein 3388670..3388882 Methylocella silvestris BL2 7092758 YP_002363352.1 CDS Msil_3081 NC_011666.1 3388995 3389246 R hypothetical protein complement(3388995..3389246) Methylocella silvestris BL2 7092759 YP_002363353.1 CDS Msil_3082 NC_011666.1 3389653 3389892 R KEGG: xau:Xaut_3751 hypothetical protein; hypothetical protein complement(3389653..3389892) Methylocella silvestris BL2 7092760 YP_002363354.1 CDS Msil_3083 NC_011666.1 3390724 3391899 D KEGG: bbt:BBta_3806 hypothetical protein; hypothetical protein 3390724..3391899 Methylocella silvestris BL2 7092761 YP_002363355.1 CDS Msil_3084 NC_011666.1 3391908 3393779 R PFAM: Lytic transglycosylase catalytic; KEGG: bmj:BMULJ_01427 phage-related tail protein; lytic transglycosylase complement(3391908..3393779) Methylocella silvestris BL2 7092762 YP_002363356.1 CDS Msil_3085 NC_011666.1 3393781 3394056 R hypothetical protein complement(3393781..3394056) Methylocella silvestris BL2 7092763 YP_002363357.1 CDS Msil_3086 NC_011666.1 3394118 3395056 R KEGG: reu:Reut_A2406 hypothetical protein; hypothetical protein complement(3394118..3395056) Methylocella silvestris BL2 7092764 YP_002363358.1 CDS Msil_3087 NC_011666.1 3395053 3395337 R hypothetical protein complement(3395053..3395337) Methylocella silvestris BL2 7092765 YP_002363359.1 CDS Msil_3088 NC_011666.1 3395497 3396150 R KEGG: fjo:Fjoh_0980 hypothetical protein; hypothetical protein complement(3395497..3396150) Methylocella silvestris BL2 7092766 YP_002363360.1 CDS Msil_3089 NC_011666.1 3396186 3396797 R KEGG: plu:plu3403 hypothetical protein; hypothetical protein complement(3396186..3396797) Methylocella silvestris BL2 7092767 YP_002363361.1 CDS Msil_3090 NC_011666.1 3396797 3397264 R hypothetical protein complement(3396797..3397264) Methylocella silvestris BL2 7092768 YP_002363362.1 CDS Msil_3091 NC_011666.1 3397278 3398750 R KEGG: met:M446_6968 hypothetical protein; hypothetical protein complement(3397278..3398750) Methylocella silvestris BL2 7092769 YP_002363363.1 CDS Msil_3092 NC_011666.1 3398747 3399178 R KEGG: met:M446_6967 hypothetical protein; hypothetical protein complement(3398747..3399178) Methylocella silvestris BL2 7092770 YP_002363364.1 CDS Msil_3093 NC_011666.1 3399706 3400017 D hypothetical protein 3399706..3400017 Methylocella silvestris BL2 7092771 YP_002363365.1 CDS Msil_3094 NC_011666.1 3400014 3400493 D hypothetical protein 3400014..3400493 Methylocella silvestris BL2 7092772 YP_002363366.1 CDS Msil_3095 NC_011666.1 3400501 3401742 R PFAM: virulence-associated E family protein; KEGG: bja:bll5017 hypothetical protein; virulence-associated E family protein complement(3400501..3401742) Methylocella silvestris BL2 7092773 YP_002363367.1 CDS Msil_3096 NC_011666.1 3401739 3402029 R hypothetical protein complement(3401739..3402029) Methylocella silvestris BL2 7092774 YP_002363368.1 CDS Msil_3097 NC_011666.1 3402234 3402440 R KEGG: met:M446_6922 prophage CP4-57 regulatory; hypothetical protein complement(3402234..3402440) Methylocella silvestris BL2 7092775 YP_002363369.1 CDS Msil_3098 NC_011666.1 3403128 3404414 R PFAM: integrase family protein; KEGG: met:M446_6923 integrase family protein; integrase family protein complement(3403128..3404414) Methylocella silvestris BL2 7092776 YP_002363370.1 CDS Msil_3099 NC_011666.1 3405055 3405255 D hypothetical protein 3405055..3405255 Methylocella silvestris BL2 7092777 YP_002363371.1 CDS Msil_3100 NC_011666.1 3405325 3405930 D PFAM: protein of unknown function DUF955; hypothetical protein 3405325..3405930 Methylocella silvestris BL2 7092778 YP_002363372.1 CDS Msil_3101 NC_011666.1 3406039 3406632 D PFAM: protein of unknown function DUF159; KEGG: mes:Meso_3812 protein of unknown function DUF159; hypothetical protein 3406039..3406632 Methylocella silvestris BL2 7092779 YP_002363373.1 CDS Msil_3102 NC_011666.1 3406774 3407493 D KEGG: mlo:mlr8038 hypothetical protein; hypothetical protein 3406774..3407493 Methylocella silvestris BL2 7092780 YP_002363374.1 CDS Msil_3103 NC_011666.1 3407813 3408823 D TIGRFAM: DNA polymerase LigD, ligase domain protein; PFAM: ATP dependent DNA ligase; KEGG: smd:Smed_1305 DNA polymerase LigD ligase region; DNA polymerase LigD, ligase domain-containing protein 3407813..3408823 Methylocella silvestris BL2 7092781 YP_002363375.1 CDS Msil_3104 NC_011666.1 3408953 3409243 D hypothetical protein 3408953..3409243 Methylocella silvestris BL2 7092782 YP_002363376.1 CDS Msil_3105 NC_011666.1 3409231 3409482 D KEGG: bja:bsr7112 hypothetical protein; hypothetical protein 3409231..3409482 Methylocella silvestris BL2 7092783 YP_002363377.1 CDS Msil_3106 NC_011666.1 3409766 3412702 R PFAM: pentapeptide repeat protein; SMART: AAA ATPase; KEGG: npu:Npun_R5804 pentapeptide repeat-containing protein; pentapeptide repeat-containing protein complement(3409766..3412702) Methylocella silvestris BL2 7092455 YP_002363378.1 CDS Msil_3107 NC_011666.1 3412947 3413636 R KEGG: atc:AGR_L_1989 hypothetical protein; hypothetical protein complement(3412947..3413636) Methylocella silvestris BL2 7093767 YP_002363379.1 CDS Msil_3108 NC_011666.1 3413705 3414199 R hypothetical protein complement(3413705..3414199) Methylocella silvestris BL2 7093768 YP_002363380.1 CDS Msil_3109 NC_011666.1 3414196 3416133 R KEGG: pde:Pden_2056 hypothetical protein; hypothetical protein complement(3414196..3416133) Methylocella silvestris BL2 7093769 YP_002363381.1 CDS Msil_3110 NC_011666.1 3416210 3416839 R hypothetical protein complement(3416210..3416839) Methylocella silvestris BL2 7093770 YP_002363382.1 CDS Msil_3111 NC_011666.1 3417429 3417695 R hypothetical protein complement(3417429..3417695) Methylocella silvestris BL2 7093771 YP_002363383.1 CDS Msil_3112 NC_011666.1 3418148 3418702 D PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: met:M446_7059 hypothetical protein; resolvase domain-containing protein 3418148..3418702 Methylocella silvestris BL2 7093772 YP_002363384.1 CDS Msil_3113 NC_011666.1 3418672 3419274 R hypothetical protein complement(3418672..3419274) Methylocella silvestris BL2 7093773 YP_002363385.1 CDS Msil_3114 NC_011666.1 3419356 3419700 R KEGG: atc:AGR_L_1979 hypothetical protein; hypothetical protein complement(3419356..3419700) Methylocella silvestris BL2 7093774 YP_002363386.1 CDS Msil_3115 NC_011666.1 3419697 3420287 R KEGG: rpa:RPA4544 hypothetical protein; hypothetical protein complement(3419697..3420287) Methylocella silvestris BL2 7093775 YP_002363387.1 CDS Msil_3116 NC_011666.1 3420629 3423154 R KEGG: rpa:RPA4546 hypothetical protein; hypothetical protein complement(3420629..3423154) Methylocella silvestris BL2 7093776 YP_002363388.1 CDS Msil_3117 NC_011666.1 3423763 3424215 R hypothetical protein complement(3423763..3424215) Methylocella silvestris BL2 7093777 YP_002363389.1 CDS Msil_3118 NC_011666.1 3424212 3424562 R KEGG: rpa:RPA4548 hypothetical protein; hypothetical protein complement(3424212..3424562) Methylocella silvestris BL2 7093778 YP_002363390.1 CDS Msil_3119 NC_011666.1 3424803 3426086 R PFAM: integrase family protein; KEGG: rpa:RPA4549 phage integrase; integrase family protein complement(3424803..3426086) Methylocella silvestris BL2 7093779 YP_002363391.1 CDS Msil_3120 NC_011666.1 3426456 3427520 R KEGG: xau:Xaut_3412 NapD-like protein; NapD-like protein complement(3426456..3427520) Methylocella silvestris BL2 7093780 YP_002363392.1 CDS Msil_3121 NC_011666.1 3427517 3428521 R PFAM: protein of unknown function DUF323; KEGG: bja:bll5075 hypothetical protein; hypothetical protein complement(3427517..3428521) Methylocella silvestris BL2 7093781 YP_002363393.1 CDS Msil_3122 NC_011666.1 3428555 3429535 R KEGG: met:M446_6752 hypothetical protein; hypothetical protein complement(3428555..3429535) Methylocella silvestris BL2 7093782 YP_002363394.1 CDS Msil_3123 NC_011666.1 3429612 3431261 R PFAM: sulfatase; KEGG: smd:Smed_3791 sulfatase; sulfatase complement(3429612..3431261) Methylocella silvestris BL2 7093783 YP_002363395.1 CDS Msil_3124 NC_011666.1 3431885 3432634 D PFAM: HhH-GPD family protein; KEGG: met:M446_4878 HhH-GPD family protein; HhH-GPD family protein 3431885..3432634 Methylocella silvestris BL2 7093784 YP_002363396.1 CDS Msil_3125 NC_011666.1 3432802 3436227 D SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_1546 TPR repeat-containing protein; Tetratricopeptide domain-containing protein 3432802..3436227 Methylocella silvestris BL2 7093785 YP_002363397.1 CDS Msil_3126 NC_011666.1 3436340 3436609 R hypothetical protein complement(3436340..3436609) Methylocella silvestris BL2 7093786 YP_002363398.1 CDS Msil_3127 NC_011666.1 3436627 3437124 R PFAM: protein of unknown function DUF336; KEGG: bav:BAV1819 exported protein; hypothetical protein complement(3436627..3437124) Methylocella silvestris BL2 7093787 YP_002363399.1 CDS Msil_3128 NC_011666.1 3437160 3437714 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bte:BTH_I2870 BcpB, putative; alkyl hydroperoxide reductase complement(3437160..3437714) Methylocella silvestris BL2 7093788 YP_002363400.1 CDS Msil_3129 NC_011666.1 3437845 3438324 R KEGG: azo:azo2348 hypothetical rhodanese sulfurtransferase protein; rhodanese sulfurtransferase protein complement(3437845..3438324) Methylocella silvestris BL2 7093789 YP_002363401.1 CDS Msil_3130 NC_011666.1 3438377 3439267 R PFAM: dienelactone hydrolase; KEGG: azo:azo2340 dienelactone hydrolase family protein; carboxymethylenebutenolidase complement(3438377..3439267) Methylocella silvestris BL2 7093790 YP_002363402.1 CDS Msil_3131 NC_011666.1 3439711 3442089 D PFAM: protein of unknown function DUF1549; KEGG: pna:Pnap_0575 protein of unknown function DUF1549; hypothetical protein 3439711..3442089 Methylocella silvestris BL2 7093791 YP_002363403.1 CDS Msil_3132 NC_011666.1 3442119 3443567 D PFAM: protein of unknown function DUF1501; KEGG: pna:Pnap_0574 protein of unknown function DUF1501; hypothetical protein 3442119..3443567 Methylocella silvestris BL2 7093792 YP_002363404.1 CDS Msil_3133 NC_011666.1 3443704 3444111 D KEGG: azo:azo2344 hypothetical secreted protein; hypothetical protein 3443704..3444111 Methylocella silvestris BL2 7093793 YP_002363405.1 CDS Msil_3134 NC_011666.1 3444386 3445183 R PFAM: cytochrome B561; KEGG: maq:Maqu_0326 cytochrome b561; cytochrome B561 complement(3444386..3445183) Methylocella silvestris BL2 7093794 YP_002363406.1 CDS Msil_3135 NC_011666.1 3445369 3445887 R PFAM: cytochrome c prime; KEGG: pnu:Pnuc_0474 cytochrome c, class II; cytochrome c prime complement(3445369..3445887) Methylocella silvestris BL2 7093795 YP_002363407.1 CDS Msil_3136 NC_011666.1 3445959 3446399 R TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bid:Bind_0527 protein TolR; protein TolR complement(3445959..3446399) Methylocella silvestris BL2 7093796 YP_002363408.1 CDS Msil_3137 NC_011666.1 3446380 3447123 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: bid:Bind_0528 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(3446380..3447123) Methylocella silvestris BL2 7093797 YP_002363409.1 CDS Msil_3138 NC_011666.1 3447175 3447951 R TIGRFAM: TonB family protein; KEGG: bid:Bind_0529 TonB family protein; TonB family protein complement(3447175..3447951) Methylocella silvestris BL2 7093798 YP_002363410.1 CDS Msil_3139 NC_011666.1 3448206 3448640 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mag:amb1054 transcriptional regulator; BadM/Rrf2 family transcriptional regulator 3448206..3448640 Methylocella silvestris BL2 7093799 YP_002363411.1 CDS Msil_3140 NC_011666.1 3448902 3449522 D PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: nwi:Nwi_0662 XRE family transcriptional regulator; XRE family transcriptional regulator 3448902..3449522 Methylocella silvestris BL2 7093800 YP_002363412.1 CDS Msil_3141 NC_011666.1 3449996 3452443 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bid:Bind_0549 TonB-dependent receptor; TonB-dependent receptor 3449996..3452443 Methylocella silvestris BL2 7093801 YP_002363413.1 CDS Msil_3142 NC_011666.1 3452499 3453221 D PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: bid:Bind_0108 porin; OmpA domain-containing protein 3452499..3453221 Methylocella silvestris BL2 7093802 YP_002363414.1 CDS Msil_3143 NC_011666.1 3453431 3454132 R PFAM: Intracellular septation protein A; KEGG: bid:Bind_0095 intracellular septation protein A; Intracellular septation protein A complement(3453431..3454132) Methylocella silvestris BL2 7093803 YP_002363415.1 CDS Msil_3144 NC_011666.1 3454748 3455446 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mfa:Mfla_0816 two component LuxR family transcriptional regulator; LuxR family transcriptional regulator 3454748..3455446 Methylocella silvestris BL2 7093804 YP_002363416.1 CDS Msil_3145 NC_011666.1 3455508 3456491 R TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: gbe:GbCGDNIH1_1915 surface antigen; 40-residue YVTN family beta-propeller repeat-containing protein complement(3455508..3456491) Methylocella silvestris BL2 7093805 YP_002363417.1 CDS Msil_3146 NC_011666.1 3456473 3457711 R KEGG: rpe:RPE_4682 hypothetical protein; hypothetical protein complement(3456473..3457711) Methylocella silvestris BL2 7093806 YP_002363418.1 CDS Msil_3147 NC_011666.1 3457723 3458295 R PFAM: cytochrome c class I; KEGG: xcv:XCV0711 putative secreted protein; cytochrome c class I complement(3457723..3458295) Methylocella silvestris BL2 7093807 YP_002363419.1 CDS Msil_3148 NC_011666.1 3458360 3460105 R PFAM: Ankyrin; SMART: extracellular solute-binding protein family 3; KEGG: xcv:XCV0710 hypothetical protein; ankyrin complement(3458360..3460105) Methylocella silvestris BL2 7093808 YP_002363420.1 CDS Msil_3149 NC_011666.1 3460200 3462095 R TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: xac:XAC0648 methanol dehydrogenase heavy chain; PQQ-dependent dehydrogenase complement(3460200..3462095) Methylocella silvestris BL2 7093809 YP_002363421.1 CDS Msil_3150 NC_011666.1 3462661 3465084 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bid:Bind_0305 TonB-dependent receptor; TonB-dependent receptor 3462661..3465084 Methylocella silvestris BL2 7093810 YP_002363422.1 CDS Msil_3151 NC_011666.1 3465200 3466561 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mfa:Mfla_0814 signal transduction histidine kinase, glucose-6-phosphate specific; integral membrane sensor signal transduction histidine kinase 3465200..3466561 Methylocella silvestris BL2 7093811 YP_002363423.1 CDS Msil_3152 NC_011666.1 3466921 3467205 D hypothetical protein 3466921..3467205 Methylocella silvestris BL2 7093812 YP_002363424.1 CDS Msil_3153 NC_011666.1 3467597 3467914 D hypothetical protein 3467597..3467914 Methylocella silvestris BL2 7093813 YP_002363425.1 CDS Msil_3154 NC_011666.1 3467904 3468098 D hypothetical protein 3467904..3468098 Methylocella silvestris BL2 7093814 YP_002363426.1 CDS Msil_3155 NC_011666.1 3468284 3468682 D PFAM: regulatory protein MarR; KEGG: atc:AGR_L_3233 hypothetical protein; MarR family transcriptional regulator 3468284..3468682 Methylocella silvestris BL2 7093815 YP_002363427.1 CDS Msil_3157 NC_011666.1 3470137 3471765 R Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase complement(3470137..3471765) Methylocella silvestris BL2 7093817 YP_002363428.1 CDS Msil_3158 NC_011666.1 3471953 3473371 D PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: bra:BRADO3747 XRE family transcriptional regulator; XRE family transcriptional regulator 3471953..3473371 Methylocella silvestris BL2 7093818 YP_002363429.1 CDS Msil_3159 NC_011666.1 3473472 3474239 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mpt:Mpe_A2225 5-carboxymethyl-2-hydroxymuconate delta-isomerase; fumarylacetoacetate (FAA) hydrolase 3473472..3474239 Methylocella silvestris BL2 7093819 YP_002363430.1 CDS Msil_3160 NC_011666.1 3474265 3475344 R PFAM: UMUC domain protein DNA-repair protein; KEGG: sme:SMa2355 nucleotidyltransferase/DNA polymerase; DNA-directed DNA polymerase complement(3474265..3475344) Methylocella silvestris BL2 7093820 YP_002363431.1 CDS Msil_3161 NC_011666.1 3475506 3476198 R PFAM: cyclic nucleotide-binding; KEGG: sme:SMc02175 putative transcription regulator protein; cyclic nucleotide-binding protein complement(3475506..3476198) Methylocella silvestris BL2 7093821 YP_002363432.1 CDS Msil_3162 NC_011666.1 3476394 3476993 R KEGG: sus:Acid_3758 hypothetical protein; hypothetical protein complement(3476394..3476993) Methylocella silvestris BL2 7093822 YP_002363433.1 CDS Msil_3163 NC_011666.1 3477224 3479155 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: sme:SMc02176 putative adenylate cyclase transmembrane protein; adenylate/guanylate cyclase with Chase sensor 3477224..3479155 Methylocella silvestris BL2 7093823 YP_002363434.1 CDS Msil_3164 NC_011666.1 3479142 3479786 R KEGG: smd:Smed_0096 hypothetical protein; hypothetical protein complement(3479142..3479786) Methylocella silvestris BL2 7093824 YP_002363435.1 CDS Msil_3165 NC_011666.1 3480110 3480457 D PFAM: cytochrome c class I; KEGG: rpd:RPD_2197 cytochrome c, class I; cytochrome c class I 3480110..3480457 Methylocella silvestris BL2 7093825 YP_002363436.1 CDS Msil_3166 NC_011666.1 3480597 3481457 D PFAM: transglutaminase domain protein; KEGG: mex:Mext_2618 transglutaminase domain protein; transglutaminase domain-containing protein 3480597..3481457 Methylocella silvestris BL2 7093826 YP_002363437.1 CDS Msil_3167 NC_011666.1 3481441 3481641 D hypothetical protein 3481441..3481641 Methylocella silvestris BL2 7093827 YP_002363438.1 CDS Msil_3168 NC_011666.1 3482730 3483299 D hypothetical protein 3482730..3483299 Methylocella silvestris BL2 7093828 YP_002363439.1 CDS Msil_3169 NC_011666.1 3483438 3484685 R KEGG: bid:Bind_0542 protein of unknown function DUF949; hypothetical protein complement(3483438..3484685) Methylocella silvestris BL2 7093829 YP_002363440.1 CDS Msil_3170 NC_011666.1 3485022 3486398 D PFAM: phospholipase D/Transphosphatidylase; KEGG: ote:Oter_2866 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase 3485022..3486398 Methylocella silvestris BL2 7093830 YP_002363441.1 CDS Msil_3171 NC_011666.1 3486449 3487405 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: cgb:cg0091 D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 3486449..3487405 Methylocella silvestris BL2 7093831 YP_002363442.1 CDS Msil_3172 NC_011666.1 3487431 3489863 R KEGG: mpo:Mpop_3752 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La complement(3487431..3489863) Methylocella silvestris BL2 7093832 YP_002363443.1 CDS Msil_3173 NC_011666.1 3489875 3490276 R KEGG: swi:Swit_1147 molecular chaperone (small heat shock protein)-like protein; molecular chaperone (small heat shock protein)-like protein complement(3489875..3490276) Methylocella silvestris BL2 7093833 YP_002363444.1 CDS Msil_3174 NC_011666.1 3490521 3491900 D hypothetical protein 3490521..3491900 Methylocella silvestris BL2 7093834 YP_002363445.1 CDS Msil_3175 NC_011666.1 3492167 3492925 D KEGG: mlo:mll9310 hypothetical protein; hypothetical protein 3492167..3492925 Methylocella silvestris BL2 7093835 YP_002363446.1 CDS Msil_3176 NC_011666.1 3493019 3494470 D TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: met:M446_2955 undecaprenyl-phosphate glucose phosphotransferase; undecaprenyl-phosphate glucose phosphotransferase 3493019..3494470 Methylocella silvestris BL2 7093836 YP_002363447.1 CDS Msil_3177 NC_011666.1 3494489 3494782 R hypothetical protein complement(3494489..3494782) Methylocella silvestris BL2 7093837 YP_002363448.1 CDS Msil_3178 NC_011666.1 3494819 3495010 R hypothetical protein complement(3494819..3495010) Methylocella silvestris BL2 7093838 YP_002363449.1 CDS Msil_3180 NC_011666.1 3498707 3499795 R KEGG: fjo:Fjoh_2662 hypothetical protein; hypothetical protein complement(3498707..3499795) Methylocella silvestris BL2 7093840 YP_002363450.1 CDS Msil_3181 NC_011666.1 3500005 3501747 D KEGG: noc:Noc_1898 hypothetical protein; hypothetical protein 3500005..3501747 Methylocella silvestris BL2 7093841 YP_002363451.1 CDS Msil_3182 NC_011666.1 3501823 3502104 D PFAM: protein of unknown function DUF427; KEGG: dge:Dgeo_1745 protein of unknown function DUF427; hypothetical protein 3501823..3502104 Methylocella silvestris BL2 7093842 YP_002363452.1 CDS Msil_3183 NC_011666.1 3502176 3502592 R KEGG: mrd:Mrad2831_2976 thioredoxin domain protein; thioredoxin domain-containing protein complement(3502176..3502592) Methylocella silvestris BL2 7093843 YP_002363453.1 CDS Msil_3184 NC_011666.1 3502632 3503234 R KEGG: mex:Mext_1774 rhodanese; rhodanese complement(3502632..3503234) Methylocella silvestris BL2 7093844 YP_002363454.1 CDS Msil_3185 NC_011666.1 3503209 3504039 R KEGG: mpo:Mpop_1736 sulphur oxidation protein SoxZ; sulfur oxidation protein SoxZ complement(3503209..3504039) Methylocella silvestris BL2 7093845 YP_002363455.1 CDS Msil_3186 NC_011666.1 3504180 3505118 R KEGG: bja:bll0263 acyl-carrier-protein S-malonyltransferase; acyl-carrier-protein S-malonyltransferase complement(3504180..3505118) Methylocella silvestris BL2 7093846 YP_002363456.1 CDS Msil_3187 NC_011666.1 3505115 3506044 R KEGG: bja:bll1272 2-(5''-triphosphoribosyl)-3'-dephosphoCoA synthase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; PFAM: triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA synthase MdcB complement(3505115..3506044) Methylocella silvestris BL2 7093847 YP_002363457.1 CDS Msil_3188 NC_011666.1 3506041 3506778 R TIGRFAM: holo-ACP synthase, malonate decarboxylase-specific; KEGG: bam:Bamb_1151 phosphoribosyl-dephospho-CoA transferase; malonate decarboxylase-specific holo-ACP synthase complement(3506041..3506778) Methylocella silvestris BL2 7092324 YP_002363458.1 CDS Msil_3189 NC_011666.1 3506771 3507508 R TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: bps:BPSL1332 putative malonate decarboxylase gamma-subunit; malonate decarboxylase subunit gamma complement(3506771..3507508) Methylocella silvestris BL2 7090604 YP_002363459.1 CDS Msil_3190 NC_011666.1 3507495 3508424 R The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta complement(3507495..3508424) Methylocella silvestris BL2 7090605 YP_002363460.1 CDS Msil_3191 NC_011666.1 3508421 3508738 R acyl carrier protein of malonate decarboxylase; malonate decarboxylase subunit delta complement(3508421..3508738) Methylocella silvestris BL2 7090606 YP_002363461.1 CDS Msil_3192 NC_011666.1 3508750 3510396 R TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: bur:Bcep18194_A4412 hypothetical protein; malonate decarboxylase subunit alpha complement(3508750..3510396) Methylocella silvestris BL2 7090607 YP_002363462.1 CDS Msil_3193 NC_011666.1 3510409 3510603 R hypothetical protein complement(3510409..3510603) Methylocella silvestris BL2 7090608 YP_002363463.1 CDS Msil_3194 NC_011666.1 3510928 3511377 D TIGRFAM: malonate transporter, MadL subunit; PFAM: malonate transporter MadL subunit; KEGG: met:M446_6858 malonate transporter, MadL subunit; malonate transporter subunit MadL 3510928..3511377 Methylocella silvestris BL2 7090609 YP_002363464.1 CDS Msil_3195 NC_011666.1 3511383 3512147 D TIGRFAM: malonate transporter, MadM subunit; PFAM: malonate/sodium symporter MadM subunit; KEGG: met:M446_6859 malonate transporter, MadM subunit; malonate transporter subunit MadM 3511383..3512147 Methylocella silvestris BL2 7090610 YP_002363465.1 CDS Msil_3196 NC_011666.1 3512162 3512875 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_0022 GntR domain protein; GntR family transcriptional regulator 3512162..3512875 Methylocella silvestris BL2 7090611 YP_002363466.1 CDS Msil_3197 NC_011666.1 3513126 3513872 D KEGG: bid:Bind_1462 hypothetical protein; hypothetical protein 3513126..3513872 Methylocella silvestris BL2 7090612 YP_002363467.1 CDS Msil_3198 NC_011666.1 3513996 3514508 D hypothetical protein 3513996..3514508 Methylocella silvestris BL2 7090613 YP_002363468.1 CDS Msil_3199 NC_011666.1 3514732 3515154 R PFAM: OsmC family protein; KEGG: ppg:PputGB1_0104 OsmC family protein; OsmC family protein complement(3514732..3515154) Methylocella silvestris BL2 7090614 YP_002363469.1 CDS Msil_3200 NC_011666.1 3515244 3516056 R PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: gbe:GbCGDNIH1_1055 dioxygenase; extradiol ring-cleavage dioxygenase class III protein subunit B complement(3515244..3516056) Methylocella silvestris BL2 7090615 YP_002363470.1 CDS Msil_3201 NC_011666.1 3516061 3516621 R PFAM: YceI family protein; KEGG: mrd:Mrad2831_5251 YceI family protein; hypothetical protein complement(3516061..3516621) Methylocella silvestris BL2 7090616 YP_002363471.1 CDS Msil_3202 NC_011666.1 3516618 3517211 R PFAM: cytochrome B561; KEGG: gdi:GDI1482 putative cytochrome b561; cytochrome B561 complement(3516618..3517211) Methylocella silvestris BL2 7090617 YP_002363472.1 CDS Msil_3203 NC_011666.1 3517227 3517844 R PFAM: YceI family protein; KEGG: mrd:Mrad2831_5253 YceI family protein; hypothetical protein complement(3517227..3517844) Methylocella silvestris BL2 7090618 YP_002363473.1 CDS Msil_3204 NC_011666.1 3517959 3518882 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpc:RPC_2324 transcriptional regulator, LysR family; LysR family transcriptional regulator 3517959..3518882 Methylocella silvestris BL2 7090619 YP_002363474.1 CDS Msil_3205 NC_011666.1 3519061 3520776 D PFAM: tyrosine protein kinase; Protein phosphatase 2C-like; Serine/threonine protein kinase-related; SMART: protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: mca:MCA0593 protein phosphatase/kinase family protein; protein serine/threonine phosphatase 3519061..3520776 Methylocella silvestris BL2 7090620 YP_002363475.1 CDS Msil_3206 NC_011666.1 3520802 3521257 R PFAM: UspA domain protein; KEGG: xau:Xaut_2230 UspA domain-containing protein; UspA domain-containing protein complement(3520802..3521257) Methylocella silvestris BL2 7090621 YP_002363476.1 CDS Msil_3207 NC_011666.1 3521636 3522262 D KEGG: bra:BRADO3591 hypothetical protein; hypothetical protein 3521636..3522262 Methylocella silvestris BL2 7090622 YP_002363477.1 CDS Msil_3208 NC_011666.1 3522302 3524170 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: swi:Swit_4726 multi-sensor hybrid histidine kinase; multi-sensor hybrid histidine kinase complement(3522302..3524170) Methylocella silvestris BL2 7090623 YP_002363478.1 CDS Msil_3209 NC_011666.1 3524310 3524768 R PFAM: MaoC domain protein dehydratase; KEGG: azo:azo0191 hypothetical protein; MaoC domain-containing protein dehydratase complement(3524310..3524768) Methylocella silvestris BL2 7090624 YP_002363479.1 CDS Msil_3210 NC_011666.1 3524847 3525875 R PFAM: aldo/keto reductase; KEGG: bxe:Bxe_A3015 putative oxidoreductase, MocA; aldo/keto reductase complement(3524847..3525875) Methylocella silvestris BL2 7090625 YP_002363480.1 CDS Msil_3211 NC_011666.1 3526028 3526408 R PFAM: 4-oxalocrotonate tautomerase; KEGG: aba:Acid345_4668 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(3526028..3526408) Methylocella silvestris BL2 7090626 YP_002363481.1 CDS Msil_3212 NC_011666.1 3526589 3527050 R PFAM: globin; KEGG: xau:Xaut_5029 globin; globin complement(3526589..3527050) Methylocella silvestris BL2 7090627 YP_002363482.1 CDS Msil_3213 NC_011666.1 3527064 3527540 R KEGG: nha:Nham_2813 hypothetical protein; hypothetical protein complement(3527064..3527540) Methylocella silvestris BL2 7090628 YP_002363483.1 CDS Msil_3214 NC_011666.1 3527622 3528521 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbt:BBta_1652 LysR family transcriptional regulator; LysR family transcriptional regulator complement(3527622..3528521) Methylocella silvestris BL2 7090629 YP_002363484.1 CDS Msil_3215 NC_011666.1 3528638 3529339 D PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: rpb:RPB_4505 pirin-like protein; Pirin domain-containing protein 3528638..3529339 Methylocella silvestris BL2 7090630 YP_002363485.1 CDS Msil_3216 NC_011666.1 3529422 3530021 D TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: rpt:Rpal_0979 flavoprotein WrbA; flavoprotein WrbA 3529422..3530021 Methylocella silvestris BL2 7090631 YP_002363486.1 CDS Msil_3217 NC_011666.1 3530058 3530459 D PFAM: DoxX family protein; KEGG: rme:Rmet_4295 DoxX; DoxX family protein 3530058..3530459 Methylocella silvestris BL2 7090632 YP_002363487.1 CDS Msil_3218 NC_011666.1 3530591 3530908 D KEGG: sme:SMc01449 hypothetical protein; hypothetical protein 3530591..3530908 Methylocella silvestris BL2 7090633 YP_002363488.1 CDS Msil_3219 NC_011666.1 3530987 3531982 R KEGG: smd:Smed_3799 protein of unknown function DUF58; hypothetical protein complement(3530987..3531982) Methylocella silvestris BL2 7090634 YP_002363489.1 CDS Msil_3220 NC_011666.1 3532206 3533732 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG: bid:Bind_0566 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3532206..3533732 Methylocella silvestris BL2 7090635 YP_002363490.1 CDS Msil_3221 NC_011666.1 3533847 3534632 D PFAM: CDP-diacylglycerol pyrophosphatase; KEGG: mrd:Mrad2831_5996 CDP-diacylglycerol diphosphatase; CDP-diacylglycerol diphosphatase 3533847..3534632 Methylocella silvestris BL2 7090636 YP_002363491.1 CDS Msil_3222 NC_011666.1 3534734 3535930 D TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: bid:Bind_3146 DNA replication and repair protein RecF; DNA replication and repair protein RecF 3534734..3535930 Methylocella silvestris BL2 7090637 YP_002363492.1 CDS Msil_3223 NC_011666.1 3536034 3537485 D KEGG: bid:Bind_0361 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 3536034..3537485 Methylocella silvestris BL2 7090638 YP_002363493.1 CDS Msil_3224 NC_011666.1 3537489 3538400 R KEGG: bid:Bind_2853 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase complement(3537489..3538400) Methylocella silvestris BL2 7090639 YP_002363494.1 CDS ispH NC_011666.1 3538432 3539391 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(3538432..3539391) Methylocella silvestris BL2 7090640 YP_002363495.1 CDS Msil_3226 NC_011666.1 3539542 3540435 D PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO6083 putative hydrolase; alpha/beta hydrolase fold protein 3539542..3540435 Methylocella silvestris BL2 7090641 YP_002363496.1 CDS Msil_3227 NC_011666.1 3540566 3541906 D KEGG: rfr:Rfer_1577 protease-like; protease-like protein 3540566..3541906 Methylocella silvestris BL2 7090642 YP_002363497.1 CDS Msil_3228 NC_011666.1 3542010 3542390 R hypothetical protein complement(3542010..3542390) Methylocella silvestris BL2 7090643 YP_002363498.1 CDS Msil_3229 NC_011666.1 3542413 3542787 R hypothetical protein complement(3542413..3542787) Methylocella silvestris BL2 7090644 YP_002363499.1 CDS Msil_3230 NC_011666.1 3543263 3543703 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bid:Bind_1908 CMP/dCMP deaminase zinc-binding; CMP/dCMP deaminase complement(3543263..3543703) Methylocella silvestris BL2 7090645 YP_002363500.1 CDS Msil_3231 NC_011666.1 3543826 3544584 D catalyzes the formation of precorrin 6x from precorrin 5; precorrin 6A synthase 3543826..3544584 Methylocella silvestris BL2 7090646 YP_002363501.1 CDS Msil_3232 NC_011666.1 3544599 3545747 R PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: bid:Bind_2472 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein complement(3544599..3545747) Methylocella silvestris BL2 7090647 YP_002363502.1 CDS Msil_3233 NC_011666.1 3545878 3546798 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bid:Bind_2471 transcriptional regulator, LysR family; LysR family transcriptional regulator 3545878..3546798 Methylocella silvestris BL2 7090648 YP_002363503.1 CDS Msil_3234 NC_011666.1 3546858 3548708 D KEGG: azc:AZC_3530 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 3546858..3548708 Methylocella silvestris BL2 7090649 YP_002363504.1 CDS Msil_3235 NC_011666.1 3548732 3549220 D PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_0845 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3548732..3549220 Methylocella silvestris BL2 7090650 YP_002363505.1 CDS Msil_3236 NC_011666.1 3549390 3549692 D KEGG: bid:Bind_3148 hypothetical protein; hypothetical protein 3549390..3549692 Methylocella silvestris BL2 7090651 YP_002363506.1 CDS Msil_3237 NC_011666.1 3549775 3551670 R KEGG: bid:Bind_3151 lipid A ABC exporter family, fused ATPase and inner membrane subunits; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid A ABC exporter family, fused ATPase and inner membrane subunits complement(3549775..3551670) Methylocella silvestris BL2 7090652 YP_002363507.1 CDS Msil_3238 NC_011666.1 3551833 3553128 R KEGG: mex:Mext_0675 aspartate aminotransferase; GntR family transcriptional regulator complement(3551833..3553128) Methylocella silvestris BL2 7090653 YP_002363508.1 CDS Msil_3239 NC_011666.1 3553351 3554349 D TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; NmrA family protein; Male sterility domain; KEGG: bpd:BURPS668_A3049 NAD-dependent epimerase/dehydratase family protein; hopanoid-associated sugar epimerase 3553351..3554349 Methylocella silvestris BL2 7090654 YP_002363509.1 CDS Msil_3240 NC_011666.1 3554346 3555221 D TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: bid:Bind_3153 squalene synthase HpnC; squalene synthase 3554346..3555221 Methylocella silvestris BL2 7090655 YP_002363510.1 CDS Msil_3241 NC_011666.1 3555218 3556102 D TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: bid:Bind_3154 squalene synthase HpnD; squalene synthase 3555218..3556102 Methylocella silvestris BL2 7090656 YP_002363511.1 CDS Msil_3242 NC_011666.1 3556117 3557376 D TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; KEGG: bid:Bind_3155 squalene-associated FAD-dependent desaturase; squalene-associated FAD-dependent desaturase 3556117..3557376 Methylocella silvestris BL2 7090657 YP_002363512.1 CDS Msil_3243 NC_011666.1 3557595 3559613 D KEGG: bid:Bind_3156 squalene-hopene cyclase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene-hopene cyclase 3557595..3559613 Methylocella silvestris BL2 7090658 YP_002363513.1 CDS Msil_3244 NC_011666.1 3559616 3560377 D TIGRFAM: hopanoid-associated phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: bid:Bind_3157 hypothetical protein; hopanoid-associated phosphorylase 3559616..3560377 Methylocella silvestris BL2 7090659 YP_002363514.1 CDS Msil_3245 NC_011666.1 3560267 3561415 R TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; KEGG: bid:Bind_3158 hopanoid biosynthesis associated radical SAM protein HpnH; hopanoid biosynthesis associated radical SAM protein HpnH complement(3560267..3561415) Methylocella silvestris BL2 7090660 YP_002363515.1 CDS Msil_3246 NC_011666.1 3562166 3564814 D TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: bid:Bind_3159 hopanoid biosynthesis associated RND transporter like protein HpnN; hopanoid biosynthesis associated RND transporter like protein HpnN 3562166..3564814 Methylocella silvestris BL2 7090661 YP_002363516.1 CDS Msil_3247 NC_011666.1 3565019 3565579 R KEGG: bid:Bind_3450 hypothetical protein; hypothetical protein complement(3565019..3565579) Methylocella silvestris BL2 7090662 YP_002363517.1 CDS Msil_3248 NC_011666.1 3565663 3569082 R PFAM: helicase domain protein; KEGG: bid:Bind_0074 helicase domain protein; helicase domain-containing protein complement(3565663..3569082) Methylocella silvestris BL2 7090663 YP_002363518.1 CDS Msil_3249 NC_011666.1 3569085 3569261 R hypothetical protein complement(3569085..3569261) Methylocella silvestris BL2 7090664 YP_002363519.1 CDS Msil_3250 NC_011666.1 3569522 3569833 R TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: bid:Bind_3048 rare lipoprotein A; rare lipoprotein A complement(3569522..3569833) Methylocella silvestris BL2 7090665 YP_002363520.1 CDS Msil_3251 NC_011666.1 3570129 3571070 R KEGG: bpt:Bpet0655 DMT superfamily permease; DMT superfamily permease complement(3570129..3571070) Methylocella silvestris BL2 7090666 YP_002363521.1 CDS Msil_3252 NC_011666.1 3572346 3573143 D TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: bid:Bind_3642 histidinol-phosphate phosphatase; histidinol-phosphate phosphatase 3572346..3573143 Methylocella silvestris BL2 7090667 YP_002363522.1 CDS Msil_3253 NC_011666.1 3573211 3574614 R PFAM: NAD(P) transhydrogenase beta subunit; KEGG: bid:Bind_3540 NAD(P)(+) transhydrogenase (AB-specific); NAD(P)(+) transhydrogenase complement(3573211..3574614) Methylocella silvestris BL2 7090668 YP_002363523.1 CDS Msil_3254 NC_011666.1 3574618 3575055 R KEGG: bid:Bind_3539 putative NAD(P) transhydrogenase subunit alpha part 2 transmembrane protein; putative NAD(P) transhydrogenase subunit alpha part 2 transmembrane protein complement(3574618..3575055) Methylocella silvestris BL2 7090669 YP_002363524.1 CDS Msil_3255 NC_011666.1 3575137 3576483 R PFAM: alanine dehydrogenase/PNT domain protein; KEGG: bid:Bind_3538 alanine dehydrogenase/PNT domain protein; NAD(P)(+) transhydrogenase complement(3575137..3576483) Methylocella silvestris BL2 7090670 YP_002363525.1 CDS Msil_3256 NC_011666.1 3576563 3576712 R KEGG: mes:Meso_2807 hypothetical protein; hypothetical protein complement(3576563..3576712) Methylocella silvestris BL2 7090671 YP_002363526.1 CDS Msil_3257 NC_011666.1 3576836 3578206 R PFAM: ABC-1 domain protein; KEGG: met:M446_3146 ABC-1 domain protein; ABC-1 domain-containing protein complement(3576836..3578206) Methylocella silvestris BL2 7090672 YP_002363527.1 CDS Msil_3258 NC_011666.1 3578361 3578975 R PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_1742 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3578361..3578975) Methylocella silvestris BL2 7090673 YP_002363528.1 CDS Msil_3259 NC_011666.1 3579359 3580696 R responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase complement(3579359..3580696) Methylocella silvestris BL2 7090674 YP_002363529.1 CDS Msil_3260 NC_011666.1 3580693 3581454 R TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: azc:AZC_3944 precorrin-4 C11-methyltransferase region; precorrin-4 C(11)-methyltransferase complement(3580693..3581454) Methylocella silvestris BL2 7090675 YP_002363530.1 CDS Msil_3261 NC_011666.1 3581465 3581848 R KEGG: bid:Bind_3514 putative CobE protein; putative CobE protein complement(3581465..3581848) Methylocella silvestris BL2 7090676 YP_002363531.1 CDS Msil_3262 NC_011666.1 3581845 3583086 R KEGG: bid:Bind_3513 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subunit CbiE complement(3581845..3583086) Methylocella silvestris BL2 7090677 YP_002363532.1 CDS Msil_3263 NC_011666.1 3583119 3583880 D KEGG: bid:Bind_3512 precorrin-6x reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; precorrin-6x reductase 3583119..3583880 Methylocella silvestris BL2 7090678 YP_002363533.1 CDS Msil_3264 NC_011666.1 3583847 3584626 R TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bid:Bind_3511 precorrin-3B C17-methyltransferase; precorrin-3B C(17)-methyltransferase complement(3583847..3584626) Methylocella silvestris BL2 7090679 YP_002363534.1 CDS Msil_3265 NC_011666.1 3584623 3585366 R TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bid:Bind_3510 precorrin-2 C20-methyltransferase; precorrin-2 C(20)-methyltransferase complement(3584623..3585366) Methylocella silvestris BL2 7090680 YP_002363535.1 CDS Msil_3266 NC_011666.1 3585363 3586010 R PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: bid:Bind_3509 precorrin-8X methylmutase; precorrin-8X methylmutase complement(3585363..3586010) Methylocella silvestris BL2 7090681 YP_002363536.1 CDS Msil_3267 NC_011666.1 3586126 3587397 R TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: bid:Bind_3508 precorrin-3B synthase; precorrin-3B synthase complement(3586126..3587397) Methylocella silvestris BL2 7090682 YP_002363537.1 CDS Msil_3268 NC_011666.1 3587391 3590738 R KEGG: bid:Bind_3507 cobaltochelatase, CobN subunit; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase; cobaltochelatase complement(3587391..3590738) Methylocella silvestris BL2 7090683 YP_002363538.1 CDS Msil_3269 NC_011666.1 3590739 3591788 R TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bid:Bind_3506 cobalamin biosynthesis protein CobW; cobalamin biosynthesis protein CobW complement(3590739..3591788) Methylocella silvestris BL2 7090684 YP_002363539.1 CDS Msil_3270 NC_011666.1 3592141 3592656 R KEGG: mrd:Mrad2831_3517 hypothetical protein; hypothetical protein complement(3592141..3592656) Methylocella silvestris BL2 7092325 YP_002363540.1 CDS Msil_3271 NC_011666.1 3592845 3593462 D KEGG: bra:BRADO4912 Cob(I)yrinic acid a,c-diamide adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 3592845..3593462 Methylocella silvestris BL2 7090767 YP_002363541.1 CDS Msil_3272 NC_011666.1 3593498 3594940 D TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: mrd:Mrad2831_1471 cobyric acid synthase CobQ; cobyric acid synthase CobQ 3593498..3594940 Methylocella silvestris BL2 7090768 YP_002363542.1 CDS Msil_3273 NC_011666.1 3594924 3595916 R TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: bid:Bind_0388 cobalamin biosynthesis protein CobD; cobalamin biosynthesis protein CobD complement(3594924..3595916) Methylocella silvestris BL2 7090769 YP_002363543.1 CDS Msil_3274 NC_011666.1 3595971 3597029 D TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: bid:Bind_0389 L-threonine-O-3-phosphate decarboxylase; L-threonine-O-3-phosphate decarboxylase 3595971..3597029 Methylocella silvestris BL2 7090770 YP_002363544.1 CDS Msil_3275 NC_011666.1 3597026 3597688 R TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; KEGG: mrd:Mrad2831_0102 nicotinate (nicotinamide) nucleotide adenylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase complement(3597026..3597688) Methylocella silvestris BL2 7090771 YP_002363545.1 CDS proA NC_011666.1 3597822 3599111 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(3597822..3599111) Methylocella silvestris BL2 7090772 YP_002363546.1 CDS Msil_3277 NC_011666.1 3599209 3599763 D PFAM: AIG2 family protein; KEGG: bid:Bind_2465 AIG2 family protein; AIG2 family protein 3599209..3599763 Methylocella silvestris BL2 7090773 YP_002363547.1 CDS Msil_3278 NC_011666.1 3599894 3600877 D TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bbt:BBta_3178 ABC transporter substrate-binding protein; aliphatic sulfonate ABC transporter periplasmic substrate-binding protein 3599894..3600877 Methylocella silvestris BL2 7090774 YP_002363548.1 CDS Msil_3279 NC_011666.1 3600884 3602047 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(3600884..3602047) Methylocella silvestris BL2 7090775 YP_002363549.1 CDS Msil_3280 NC_011666.1 3602044 3603084 R TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: bid:Bind_0415 GTP-binding protein Obg/CgtA; GTP-binding protein Obg/CgtA complement(3602044..3603084) Methylocella silvestris BL2 7090776 YP_002363550.1 CDS Msil_3281 NC_011666.1 3603224 3603868 R PFAM: GCN5-related N-acetyltransferase; KEGG: bid:Bind_0416 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3603224..3603868) Methylocella silvestris BL2 7090777 YP_002363551.1 CDS rpmA NC_011666.1 3604049 3604324 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(3604049..3604324) Methylocella silvestris BL2 7090778 YP_002363552.1 CDS rplU NC_011666.1 3604480 3604857 R PFAM: ribosomal protein L21; KEGG: bid:Bind_0418 ribosomal protein L21; 50S ribosomal protein L21 complement(3604480..3604857) Methylocella silvestris BL2 7090779 YP_002363553.1 CDS Msil_3284 NC_011666.1 3605582 3607579 D PFAM: Peptidase M23; KEGG: bid:Bind_0419 peptidase M23; peptidase M23 3605582..3607579 Methylocella silvestris BL2 7090780 YP_002363554.1 CDS Msil_3285 NC_011666.1 3607615 3608322 R KEGG: bid:Bind_0421 hypothetical protein; hypothetical protein complement(3607615..3608322) Methylocella silvestris BL2 7090781 YP_002363555.1 CDS Msil_3286 NC_011666.1 3608603 3609493 R PFAM: glutamyl-tRNA synthetase class Ic; KEGG: bid:Bind_0433 glutamyl-tRNA synthetase class Ic; glutamyl-tRNA synthetase complement(3608603..3609493) Methylocella silvestris BL2 7090782 YP_002363556.1 CDS Msil_3287 NC_011666.1 3609701 3611794 R TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: bid:Bind_1381 poly(R)-hydroxyalkanoic acid synthase, class I; poly(R)-hydroxyalkanoic acid synthase complement(3609701..3611794) Methylocella silvestris BL2 7090783 YP_002363557.1 CDS Msil_3288 NC_011666.1 3612128 3612613 D KEGG: bid:Bind_1382 hypothetical protein; hypothetical protein 3612128..3612613 Methylocella silvestris BL2 7090784 YP_002363558.1 CDS Msil_3289 NC_011666.1 3612626 3613348 R KEGG: bid:Bind_3106 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; Endonuclease III/Nth; endonuclease III complement(3612626..3613348) Methylocella silvestris BL2 7090785 YP_002363559.1 CDS Msil_3290 NC_011666.1 3613411 3613920 D KEGG: bid:Bind_3107 hypothetical protein; hypothetical protein 3613411..3613920 Methylocella silvestris BL2 7090786 YP_002363560.1 CDS Msil_3291 NC_011666.1 3614212 3614622 R KEGG: bid:Bind_0094 hypothetical protein; hypothetical protein complement(3614212..3614622) Methylocella silvestris BL2 7090787 YP_002363561.1 CDS Msil_3292 NC_011666.1 3614784 3615503 R PFAM: protein of unknown function DUF1013; KEGG: bid:Bind_0093 protein of unknown function DUF1013; hypothetical protein complement(3614784..3615503) Methylocella silvestris BL2 7090788 YP_002363562.1 CDS Msil_3293 NC_011666.1 3615788 3616102 D KEGG: nha:Nham_4038 hypothetical protein; hypothetical protein 3615788..3616102 Methylocella silvestris BL2 7090789 YP_002363563.1 CDS Msil_3294 NC_011666.1 3616364 3617014 D TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: bid:Bind_0092 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase 3616364..3617014 Methylocella silvestris BL2 7090790 YP_002363564.1 CDS Msil_3295 NC_011666.1 3617174 3617425 D hypothetical protein 3617174..3617425 Methylocella silvestris BL2 7090791 YP_002363565.1 CDS mepA NC_011666.1 3617461 3618384 R D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase complement(3617461..3618384) Methylocella silvestris BL2 7090792 YP_002363566.1 CDS Msil_3297 NC_011666.1 3618431 3619063 R KEGG: met:M446_0304 putative invasion protein B; putative invasion protein B complement(3618431..3619063) Methylocella silvestris BL2 7090793 YP_002363567.1 CDS Msil_3298 NC_011666.1 3619294 3619689 D PFAM: protein of unknown function DUF423; KEGG: mrd:Mrad2831_3501 protein of unknown function DUF423; hypothetical protein 3619294..3619689 Methylocella silvestris BL2 7090794 YP_002363568.1 CDS Msil_3299 NC_011666.1 3619790 3620161 D PFAM: response regulator receiver; KEGG: bid:Bind_3363 response regulator receiver protein; response regulator receiver protein 3619790..3620161 Methylocella silvestris BL2 7090795 YP_002363569.1 CDS Msil_3300 NC_011666.1 3620398 3622326 D PFAM: AsmA family protein; KEGG: bid:Bind_3365 AsmA family protein; AsmA family protein 3620398..3622326 Methylocella silvestris BL2 7090796 YP_002363570.1 CDS Msil_3301 NC_011666.1 3622350 3623039 R PFAM: cyclic nucleotide-binding; KEGG: met:M446_6568 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein complement(3622350..3623039) Methylocella silvestris BL2 7090797 YP_002363571.1 CDS Msil_3302 NC_011666.1 3623368 3624120 R PFAM: Extensin family protein; KEGG: mlo:mlr2573 hypothetical protein; extensin family protein complement(3623368..3624120) Methylocella silvestris BL2 7090798 YP_002363572.1 CDS Msil_3303 NC_011666.1 3624426 3625814 D catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase 3624426..3625814 Methylocella silvestris BL2 7090799 YP_002363573.1 CDS Msil_3304 NC_011666.1 3625828 3626559 R PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: met:M446_6568 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator complement(3625828..3626559) Methylocella silvestris BL2 7090800 YP_002363574.1 CDS Msil_3305 NC_011666.1 3626727 3627314 D KEGG: bbt:BBta_7185 hypothetical protein; hypothetical protein 3626727..3627314 Methylocella silvestris BL2 7090801 YP_002363575.1 CDS Msil_3306 NC_011666.1 3627475 3628605 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bid:Bind_2450 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 3627475..3628605 Methylocella silvestris BL2 7090802 YP_002363576.1 CDS Msil_3307 NC_011666.1 3628609 3631758 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bid:Bind_2449 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3628609..3631758 Methylocella silvestris BL2 7090803 YP_002363577.1 CDS Msil_3308 NC_011666.1 3631798 3632229 D KEGG: ret:RHE_CH01843 hypothetical protein; hypothetical protein 3631798..3632229 Methylocella silvestris BL2 7090804 YP_002363578.1 CDS Msil_3309 NC_011666.1 3632244 3633050 R PFAM: Linocin_M18 bacteriocin protein; KEGG: gdi:GDI0415 bacteriocin protein; Linocin_M18 bacteriocin protein complement(3632244..3633050) Methylocella silvestris BL2 7090805 YP_002363579.1 CDS Msil_3310 NC_011666.1 3633043 3634125 R TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: bac:BamMC406_6414 Dyp-type peroxidase family; Dyp-type peroxidase family protein complement(3633043..3634125) Methylocella silvestris BL2 7090806 YP_002363580.1 CDS Msil_3312 NC_011666.1 3637383 3637745 R PFAM: response regulator receiver; KEGG: cak:Caul_0719 response regulator receiver protein; response regulator receiver protein complement(3637383..3637745) Methylocella silvestris BL2 7090808 YP_002363581.1 CDS Msil_3313 NC_011666.1 3637956 3638585 R PFAM: regulatory protein TetR; KEGG: gdi:GDI0556 TetR family transcriptional regulator; TetR family transcriptional regulator complement(3637956..3638585) Methylocella silvestris BL2 7090809 YP_002363582.1 CDS Msil_3314 NC_011666.1 3638732 3639694 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI0555 putative oxidoreductase; short-chain dehydrogenase/reductase SDR 3638732..3639694 Methylocella silvestris BL2 7090810 YP_002363583.1 CDS Msil_3315 NC_011666.1 3639873 3640217 R KEGG: smt:Smal_2187 anti-FecI sigma factor, FecR; hypothetical protein complement(3639873..3640217) Methylocella silvestris BL2 7090811 YP_002363584.1 CDS Msil_3316 NC_011666.1 3640385 3640900 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: xau:Xaut_2777 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit complement(3640385..3640900) Methylocella silvestris BL2 7090812 YP_002363585.1 CDS Msil_3317 NC_011666.1 3641048 3642388 R PFAM: PepSY-associated TM helix domain protein; KEGG: mms:mma_3524 hypothetical protein; PepSY-associated TM helix domain-containing protein complement(3641048..3642388) Methylocella silvestris BL2 7090813 YP_002363586.1 CDS Msil_3318 NC_011666.1 3643062 3644387 R KEGG: oan:Oant_3254 L-lysine 6-monooxygenase (NADPH); L-lysine 6-monooxygenase complement(3643062..3644387) Methylocella silvestris BL2 7090814 YP_002363587.1 CDS Msil_3319 NC_011666.1 3644454 3648485 R TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: azc:AZC_3246 vicibactin biosynthesis non-ribosomal peptide synthase protein; amino acid adenylation domain-containing protein complement(3644454..3648485) Methylocella silvestris BL2 7090815 YP_002363588.1 CDS Msil_3320 NC_011666.1 3648752 3649894 D KEGG: azc:AZC_3245 putative siderophore biosynthesis protein; putative siderophore biosynthesis protein 3648752..3649894 Methylocella silvestris BL2 7090816 YP_002363589.1 CDS Msil_3321 NC_011666.1 3649891 3651360 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: azc:AZC_3244 efflux transporter inner membrane protein; MATE efflux family protein 3649891..3651360 Methylocella silvestris BL2 7090817 YP_002363590.1 CDS Msil_3322 NC_011666.1 3651360 3652538 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: azc:AZC_3243 hypothetical protein; hypothetical protein 3651360..3652538 Methylocella silvestris BL2 7090818 YP_002363591.1 CDS Msil_3323 NC_011666.1 3652559 3653173 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: azc:AZC_3242 putative sigma factor; ECF subfamily RNA polymerase sigma-24 subunit complement(3652559..3653173) Methylocella silvestris BL2 7090819 YP_002363592.1 CDS Msil_3324 NC_011666.1 3653260 3655497 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mrd:Mrad2831_4099 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(3653260..3655497) Methylocella silvestris BL2 7090820 YP_002363593.1 CDS Msil_3325 NC_011666.1 3656076 3659147 D Contains selenocysteine; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sme:SMa0002 formate dehydrogenase, major subunit (formate dehydrogenase alpha subunit); formate dehydrogenase subunit alpha 3656076..3659147 Methylocella silvestris BL2 7090821 YP_002363594.1 CDS Msil_3326 NC_011666.1 3659159 3660067 D TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Formate dehydrogenase transmembrane domain protein; KEGG: mrd:Mrad2831_1091 formate dehydrogenase, beta subunit; formate dehydrogenase subunit beta 3659159..3660067 Methylocella silvestris BL2 7090822 YP_002363595.1 CDS Msil_3327 NC_011666.1 3660064 3660750 D TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: oan:Oant_2865 formate dehydrogenase, gamma subunit; formate dehydrogenase subunit gamma 3660064..3660750 Methylocella silvestris BL2 7090823 YP_002363596.1 CDS Msil_3328 NC_011666.1 3660773 3661702 D TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; KEGG: dar:Daro_1815 formate dehydrogenase accessory protein; formate dehydrogenase accessory protein FdhE 3660773..3661702 Methylocella silvestris BL2 7090824 YP_002363597.1 CDS Msil_3329 NC_011666.1 3661712 3662764 R PFAM: permease; KEGG: bch:Bcen2424_1593 permease; permease complement(3661712..3662764) Methylocella silvestris BL2 7090825 YP_002363598.1 CDS Msil_3330 NC_011666.1 3662933 3663979 D TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: oan:Oant_2860 selenide, water dikinase; selenide, water dikinase 3662933..3663979 Methylocella silvestris BL2 7090826 YP_002363599.1 CDS Msil_3331 NC_011666.1 3663986 3664369 R KEGG: sme:SMa5014 hypothetical protein; hypothetical protein complement(3663986..3664369) Methylocella silvestris BL2 7090827 YP_002363600.1 CDS Msil_3332 NC_011666.1 3664366 3666441 R TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: azc:AZC_1153 translation elongation factor; selenocysteine-specific translation elongation factor complement(3664366..3666441) Methylocella silvestris BL2 7090828 YP_002363601.1 CDS Msil_3333 NC_011666.1 3666438 3667214 R PFAM: Sel1 domain protein repeat-containing protein; KEGG: azc:AZC_1154 Sel1 repeat-containing protein; Sel1 domain-containing protein complement(3666438..3667214) Methylocella silvestris BL2 7090830 YP_002363602.1 CDS Msil_3334 NC_011666.1 3667201 3668610 R catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase complement(3667201..3668610) Methylocella silvestris BL2 7090831 YP_002363603.1 CDS Msil_3335 NC_011666.1 3668780 3670864 R PFAM: UvrD/REP helicase; KEGG: nha:Nham_3768 UvrD/REP helicase; UvrD/REP helicase complement(3668780..3670864) Methylocella silvestris BL2 7090832 YP_002363604.1 CDS Msil_3336 NC_011666.1 3671004 3671984 R PFAM: aldo/keto reductase; KEGG: bxe:Bxe_B0844 putative aldo/keto reductase; aldo/keto reductase complement(3671004..3671984) Methylocella silvestris BL2 7090833 YP_002363605.1 CDS Msil_3337 NC_011666.1 3672117 3672683 R KEGG: noc:Noc_1336 hypothetical protein; hypothetical protein complement(3672117..3672683) Methylocella silvestris BL2 7090834 YP_002363606.1 CDS Msil_3338 NC_011666.1 3673131 3673331 D PFAM: protein of unknown function DUF1656; KEGG: mrd:Mrad2831_2405 protein of unknown function DUF1656; hypothetical protein 3673131..3673331 Methylocella silvestris BL2 7090835 YP_002363607.1 CDS Msil_3339 NC_011666.1 3673336 3674280 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:blr3854 hypothetical protein; RND family efflux transporter MFP subunit 3673336..3674280 Methylocella silvestris BL2 7090836 YP_002363608.1 CDS Msil_3340 NC_011666.1 3674533 3675432 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bid:Bind_1294 transcriptional regulator, LysR family; LysR family transcriptional regulator 3674533..3675432 Methylocella silvestris BL2 7090837 YP_002363609.1 CDS Msil_3341 NC_011666.1 3675726 3675962 D hypothetical protein 3675726..3675962 Methylocella silvestris BL2 7090838 YP_002363610.1 CDS Msil_3342 NC_011666.1 3676050 3676289 D hypothetical protein 3676050..3676289 Methylocella silvestris BL2 7090839 YP_002363611.1 CDS Msil_3343 NC_011666.1 3676370 3678436 D PFAM: Fusaric acid resistance protein conserved region; KEGG: met:M446_4864 fusaric acid resistance protein conserved region; fusaric acid resistance protein 3676370..3678436 Methylocella silvestris BL2 7090840 YP_002363612.1 CDS Msil_3344 NC_011666.1 3678678 3678932 R hypothetical protein complement(3678678..3678932) Methylocella silvestris BL2 7090841 YP_002363613.1 CDS Msil_3345 NC_011666.1 3679108 3679374 R KEGG: bid:Bind_1295 hypothetical protein; hypothetical protein complement(3679108..3679374) Methylocella silvestris BL2 7090842 YP_002363614.1 CDS Msil_3346 NC_011666.1 3679726 3679971 R hypothetical protein complement(3679726..3679971) Methylocella silvestris BL2 7090843 YP_002363615.1 CDS Msil_3347 NC_011666.1 3680082 3680183 D hypothetical protein 3680082..3680183 Methylocella silvestris BL2 7090844 YP_002363616.1 CDS Msil_3348 NC_011666.1 3680185 3680901 D PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: bid:Bind_0920 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 3680185..3680901 Methylocella silvestris BL2 7090845 YP_002363617.1 CDS Msil_3349 NC_011666.1 3681476 3682264 R KEGG: bid:Bind_0192 hypothetical protein; hypothetical protein complement(3681476..3682264) Methylocella silvestris BL2 7090846 YP_002363618.1 CDS Msil_3350 NC_011666.1 3682303 3682806 R hypothetical protein complement(3682303..3682806) Methylocella silvestris BL2 7090847 YP_002363619.1 CDS Msil_3351 NC_011666.1 3683277 3684326 R KEGG: rpe:RPE_4319 hypothetical protein; hypothetical protein complement(3683277..3684326) Methylocella silvestris BL2 7091584 YP_002363620.1 CDS Msil_3352 NC_011666.1 3684583 3684825 D KEGG: bid:Bind_0790 hypothetical protein; hypothetical protein 3684583..3684825 Methylocella silvestris BL2 7092078 YP_002363621.1 CDS Msil_3353 NC_011666.1 3684896 3685996 D KEGG: bid:Bind_0665 translation initiation factor, aIF-2BI family; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; translation initiation factor, aIF-2BI family 3684896..3685996 Methylocella silvestris BL2 7092079 YP_002363622.1 CDS Msil_3354 NC_011666.1 3686093 3686647 R KEGG: nha:Nham_4237 hypothetical protein; hypothetical protein complement(3686093..3686647) Methylocella silvestris BL2 7092080 YP_002363623.1 CDS Msil_3355 NC_011666.1 3686710 3687303 R KEGG: nha:Nham_4237 hypothetical protein; hypothetical protein complement(3686710..3687303) Methylocella silvestris BL2 7092081 YP_002363624.1 CDS Msil_3356 NC_011666.1 3687547 3687789 D KEGG: rpb:RPB_1157 hypothetical protein; hypothetical protein 3687547..3687789 Methylocella silvestris BL2 7092082 YP_002363625.1 CDS Msil_3357 NC_011666.1 3687838 3688344 R KEGG: pau:PA14_00670 hypothetical protein; hypothetical protein complement(3687838..3688344) Methylocella silvestris BL2 7092083 YP_002363626.1 CDS Msil_3358 NC_011666.1 3688429 3688872 R PFAM: BA14K family protein; KEGG: bid:Bind_2373 hypothetical protein; BA14K family protein complement(3688429..3688872) Methylocella silvestris BL2 7092084 YP_002363627.1 CDS Msil_3360 NC_011666.1 3689900 3691159 R TIGRFAM: esterase, PHB depolymerase family; PFAM: putative esterase; Esterase PHB depolymerase; KEGG: met:M446_5706 esterase, PHB depolymerase family; esterase, PHB depolymerase family complement(3689900..3691159) Methylocella silvestris BL2 7092086 YP_002363628.1 CDS Msil_3361 NC_011666.1 3691209 3691628 R KEGG: mrd:Mrad2831_6024 hypothetical protein; putative CopG/Arc/MetJ family transcriptional regulator complement(3691209..3691628) Methylocella silvestris BL2 7092087 YP_002363629.1 CDS Msil_3362 NC_011666.1 3691762 3691884 D hypothetical protein 3691762..3691884 Methylocella silvestris BL2 7092088 YP_002363630.1 CDS Msil_3363 NC_011666.1 3692619 3693251 R KEGG: mlo:mlr5283 hypothetical protein; hypothetical protein complement(3692619..3693251) Methylocella silvestris BL2 7092089 YP_002363631.1 CDS Msil_3364 NC_011666.1 3693359 3693772 R PFAM: protein of unknown function DUF1486; Limonene-12-epoxide hydrolase; KEGG: mlo:mlr5282 hypothetical protein; hypothetical protein complement(3693359..3693772) Methylocella silvestris BL2 7092090 YP_002363632.1 CDS Msil_3365 NC_011666.1 3693855 3694457 R PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mlo:mlr5281 hypothetical protein; coenzyme F420-dependent NADP oxidoreductase complement(3693855..3694457) Methylocella silvestris BL2 7092091 YP_002363633.1 CDS Msil_3366 NC_011666.1 3694487 3695239 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr5280 glucose dehydrogenase; short-chain dehydrogenase/reductase SDR complement(3694487..3695239) Methylocella silvestris BL2 7092092 YP_002363634.1 CDS Msil_3367 NC_011666.1 3695288 3696022 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B1096 glucose dehydrogenase; short-chain dehydrogenase/reductase SDR complement(3695288..3696022) Methylocella silvestris BL2 7092093 YP_002363635.1 CDS Msil_3368 NC_011666.1 3696251 3697147 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bja:blr3992 transcriptional regulatory protein; LysR family transcriptional regulator 3696251..3697147 Methylocella silvestris BL2 7092094 YP_002363636.1 CDS Msil_3370 NC_011666.1 3697523 3697819 D PFAM: transposase IS3/IS911 family protein; KEGG: mrd:Mrad2831_6259 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 3697523..3697819 Methylocella silvestris BL2 7092096 YP_002363637.1 CDS Msil_3372 NC_011666.1 3698825 3699094 D KEGG: bpy:Bphyt_3320 FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase 3698825..3699094 Methylocella silvestris BL2 7092098 YP_002363638.1 CDS Msil_3373 NC_011666.1 3699321 3700586 R KEGG: gbe:GbCGDNIH1_0795 membrane-bound aldehyde dehydrogenase, cytochrome c subunit; gluconate 2-dehydrogenase (acceptor) complement(3699321..3700586) Methylocella silvestris BL2 7092099 YP_002363639.1 CDS Msil_3374 NC_011666.1 3700633 3702828 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: nha:Nham_1181 twin-arginine translocation pathway signal; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase complement(3700633..3702828) Methylocella silvestris BL2 7092100 YP_002363640.1 CDS Msil_3375 NC_011666.1 3702838 3703305 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: met:M446_3138 (2Fe-2S)-binding domain protein; (2Fe-2S)-binding domain-containing protein complement(3702838..3703305) Methylocella silvestris BL2 7092101 YP_002363641.1 CDS Msil_3376 NC_011666.1 3703634 3705322 D PFAM: Carboxylesterase type B; KEGG: sma:SAV433 carboxylesterase; carboxylesterase type B 3703634..3705322 Methylocella silvestris BL2 7092102 YP_002363642.1 CDS Msil_3377 NC_011666.1 3705553 3706707 D KEGG: rfr:Rfer_2442 hypothetical protein; hypothetical protein 3705553..3706707 Methylocella silvestris BL2 7092103 YP_002363643.1 CDS Msil_3378 NC_011666.1 3707496 3710042 D TIGRFAM: malto-oligosyltrehalose synthase; KEGG: sus:Acid_0220 malto-oligosyltrehalose synthase; malto-oligosyltrehalose synthase 3707496..3710042 Methylocella silvestris BL2 7092104 YP_002363644.1 CDS Msil_3379 NC_011666.1 3710148 3711104 D TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: bpy:Bphyt_2026 cytochrome c oxidase, subunit II; cytochrome c oxidase subunit II 3710148..3711104 Methylocella silvestris BL2 7092105 YP_002363645.1 CDS Msil_3380 NC_011666.1 3711133 3713085 D KEGG: bxe:Bxe_A2184 cytochrome-c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I 3711133..3713085 Methylocella silvestris BL2 7092106 YP_002363646.1 CDS Msil_3381 NC_011666.1 3713078 3713692 D PFAM: cytochrome c oxidase subunit III; KEGG: bpd:BURPS668_0770 cytochrome c oxidase, subunit I/subunit III; cytochrome c oxidase subunit III 3713078..3713692 Methylocella silvestris BL2 7092107 YP_002363647.1 CDS Msil_3382 NC_011666.1 3713697 3714164 D KEGG: nmu:Nmul_A0457 hypothetical protein; hypothetical protein 3713697..3714164 Methylocella silvestris BL2 7092108 YP_002363648.1 CDS Msil_3383 NC_011666.1 3714164 3714526 D PFAM: cytochrome c class I; KEGG: sus:Acid_6904 cytochrome c, class I; cytochrome c class I 3714164..3714526 Methylocella silvestris BL2 7092109 YP_002363649.1 CDS Msil_3384 NC_011666.1 3714523 3715323 R KEGG: rpc:RPC_3846 hypothetical protein; hypothetical protein complement(3714523..3715323) Methylocella silvestris BL2 7092110 YP_002363650.1 CDS Msil_3385 NC_011666.1 3715323 3715766 R PFAM: cytochrome c class I; KEGG: met:M446_2992 cytochrome c class I; cytochrome c class I complement(3715323..3715766) Methylocella silvestris BL2 7092111 YP_002363651.1 CDS Msil_3386 NC_011666.1 3715763 3716581 R SMART: extracellular solute-binding protein family 3; KEGG: mex:Mext_0098 extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein complement(3715763..3716581) Methylocella silvestris BL2 7092112 YP_002363652.1 CDS Msil_3387 NC_011666.1 3716562 3718367 R TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: met:M446_2994 PQQ-dependent dehydrogenase, methanol/ethanol family; PQQ-dependent dehydrogenase complement(3716562..3718367) Methylocella silvestris BL2 7092113 YP_002363653.1 CDS Msil_3389 NC_011666.1 3719036 3720214 R PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: pna:Pnap_2674 FAD dependent oxidoreductase; monooxygenase complement(3719036..3720214) Methylocella silvestris BL2 7092115 YP_002363654.1 CDS Msil_3390 NC_011666.1 3720211 3720930 R KEGG: pna:Pnap_2675 hypothetical protein; hypothetical protein complement(3720211..3720930) Methylocella silvestris BL2 7092116 YP_002363655.1 CDS Msil_3391 NC_011666.1 3720930 3722012 R PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: scl:sce2182 naringenin-chalcone synthase; Naringenin-chalcone synthase complement(3720930..3722012) Methylocella silvestris BL2 7092117 YP_002363656.1 CDS Msil_3392 NC_011666.1 3722185 3722391 R KEGG: bja:blr2053 putative transposase; hypothetical protein complement(3722185..3722391) Methylocella silvestris BL2 7092118 YP_002363657.1 CDS Msil_3394 NC_011666.1 3723387 3726521 R PFAM: acriflavin resistance protein; KEGG: xau:Xaut_1597 acriflavin resistance protein; acriflavin resistance protein complement(3723387..3726521) Methylocella silvestris BL2 7092120 YP_002363658.1 CDS Msil_3395 NC_011666.1 3726518 3727687 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:blr0276 hypothetical protein; RND family efflux transporter MFP subunit complement(3726518..3727687) Methylocella silvestris BL2 7092121 YP_002363659.1 CDS Msil_3398 NC_011666.1 3729127 3730407 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bja:bll6038 transport protein; major facilitator superfamily protein complement(3729127..3730407) Methylocella silvestris BL2 7092124 YP_002363660.1 CDS Msil_3399 NC_011666.1 3730539 3731321 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bph:Bphy_1231 putative hydratase/decarboxylase; fumarylacetoacetate (FAA) hydrolase complement(3730539..3731321) Methylocella silvestris BL2 7092125 YP_002363661.1 CDS Msil_3400 NC_011666.1 3731360 3732568 R PFAM: aminotransferase class V; KEGG: bid:Bind_3524 serine--glyoxylate transaminase; serine--glyoxylate transaminase complement(3731360..3732568) Methylocella silvestris BL2 7092126 YP_002363662.1 CDS Msil_3401 NC_011666.1 3732720 3733490 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mpo:Mpop_4718 transcriptional regulator, GntR family; GntR family transcriptional regulator 3732720..3733490 Methylocella silvestris BL2 7092127 YP_002363663.1 CDS Msil_3402 NC_011666.1 3733626 3736595 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: bja:blr6041 putative glycolate oxidase; D-lactate dehydrogenase 3733626..3736595 Methylocella silvestris BL2 7092128 YP_002363664.1 CDS Msil_3403 NC_011666.1 3736592 3737743 D PFAM: alanine racemase domain protein; KEGG: pla:Plav_0614 alanine racemase domain-containing protein; alanine racemase domain-containing protein 3736592..3737743 Methylocella silvestris BL2 7092129 YP_002363665.1 CDS Msil_3405 NC_011666.1 3739284 3739511 D hypothetical protein 3739284..3739511 Methylocella silvestris BL2 7092131 YP_002363666.1 CDS Msil_3406 NC_011666.1 3739495 3739779 D hypothetical protein 3739495..3739779 Methylocella silvestris BL2 7092132 YP_002363667.1 CDS Msil_3407 NC_011666.1 3741091 3741339 R hypothetical protein complement(3741091..3741339) Methylocella silvestris BL2 7092133 YP_002363668.1 CDS Msil_3408 NC_011666.1 3741416 3741589 D hypothetical protein 3741416..3741589 Methylocella silvestris BL2 7092134 YP_002363669.1 CDS Msil_3409 NC_011666.1 3742042 3742752 D PFAM: cation efflux protein; KEGG: nar:Saro_2151 cation efflux protein; cation efflux protein 3742042..3742752 Methylocella silvestris BL2 7092135 YP_002363670.1 CDS Msil_3410 NC_011666.1 3743252 3743827 D KEGG: jan:Jann_2415 hypothetical protein; hypothetical protein 3743252..3743827 Methylocella silvestris BL2 7092136 YP_002363671.1 CDS Msil_3411 NC_011666.1 3744635 3744904 R hypothetical protein complement(3744635..3744904) Methylocella silvestris BL2 7092137 YP_002363672.1 CDS Msil_3412 NC_011666.1 3745056 3745373 R KEGG: bid:Bind_1984 hypothetical protein; hypothetical protein complement(3745056..3745373) Methylocella silvestris BL2 7092138 YP_002363673.1 CDS Msil_3413 NC_011666.1 3745576 3746286 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mrd:Mrad2831_1241 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator complement(3745576..3746286) Methylocella silvestris BL2 7092139 YP_002363674.1 CDS Msil_3414 NC_011666.1 3746510 3750898 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: acriflavin resistance protein; secretion protein HlyD family protein; KEGG: bam:Bamb_2096 acriflavin resistance protein; RND family efflux transporter MFP subunit complement(3746510..3750898) Methylocella silvestris BL2 7092140 YP_002363675.1 CDS Msil_3415 NC_011666.1 3751243 3752892 D KEGG: bid:Bind_1995 hypothetical protein; hypothetical protein 3751243..3752892 Methylocella silvestris BL2 7092141 YP_002363676.1 CDS Msil_3416 NC_011666.1 3753090 3754460 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bid:Bind_3446 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 3753090..3754460 Methylocella silvestris BL2 7092142 YP_002363677.1 CDS Msil_3418 NC_011666.1 3755587 3756528 D hypothetical protein 3755587..3756528 Methylocella silvestris BL2 7092144 YP_002363678.1 CDS Msil_3419 NC_011666.1 3756973 3757740 R KEGG: mrd:Mrad2831_3475 hypothetical protein; hypothetical protein complement(3756973..3757740) Methylocella silvestris BL2 7092145 YP_002363679.1 CDS Msil_3420 NC_011666.1 3757809 3758513 R PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: mjl:Mjls_3599 molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region complement(3757809..3758513) Methylocella silvestris BL2 7092146 YP_002363680.1 CDS Msil_3421 NC_011666.1 3759051 3759668 D PFAM: regulatory protein TetR; KEGG: swi:Swit_4362 transcriptional regulator, TetR family; TetR family transcriptional regulator 3759051..3759668 Methylocella silvestris BL2 7092147 YP_002363681.1 CDS Msil_3423 NC_011666.1 3760447 3761652 D PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: mlo:mll1994 hypothetical protein; succinylglutamate desuccinylase 3760447..3761652 Methylocella silvestris BL2 7092149 YP_002363682.1 CDS Msil_3425 NC_011666.1 3762417 3763112 R KEGG: bja:blr1214 putative lipoprotein; putative lipoprotein complement(3762417..3763112) Methylocella silvestris BL2 7092151 YP_002363683.1 CDS Msil_3426 NC_011666.1 3763236 3763772 R KEGG: bja:blr1215 hypothetical protein; hypothetical protein complement(3763236..3763772) Methylocella silvestris BL2 7092152 YP_002363684.1 CDS Msil_3427 NC_011666.1 3764156 3764806 R PFAM: regulatory protein TetR; KEGG: rpa:RPA4108 TetR family transcriptional regulator; TetR family transcriptional regulator complement(3764156..3764806) Methylocella silvestris BL2 7092153 YP_002363685.1 CDS Msil_3428 NC_011666.1 3764999 3765601 D KEGG: bja:bll3735 putative outer-membrane immunogenic protein precursor; putative outer-membrane immunogenic protein 3764999..3765601 Methylocella silvestris BL2 7092154 YP_002363686.1 CDS Msil_3429 NC_011666.1 3766470 3767408 D KEGG: reu:Reut_A1460 putative signal peptide; putative signal peptide 3766470..3767408 Methylocella silvestris BL2 7092155 YP_002363687.1 CDS Msil_3430 NC_011666.1 3767780 3768904 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rxy:Rxyl_1758 alcohol dehydrogenase, zinc-binding protein; alcohol dehydrogenase GroES domain-containing protein 3767780..3768904 Methylocella silvestris BL2 7092156 YP_002363688.1 CDS Msil_3431 NC_011666.1 3768914 3770437 D PFAM: AMP-dependent synthetase and ligase; KEGG: bph:Bphy_4871 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 3768914..3770437 Methylocella silvestris BL2 7092157 YP_002363689.1 CDS Msil_3432 NC_011666.1 3770450 3771874 D PFAM: Aldehyde Dehydrogenase; KEGG: mpo:Mpop_1257 aldehyde dehydrogenase; aldehyde dehydrogenase 3770450..3771874 Methylocella silvestris BL2 7092158 YP_002363690.1 CDS Msil_3433 NC_011666.1 3771919 3773514 D PFAM: carboxyl transferase; KEGG: swi:Swit_2162 propionyl-CoA carboxylase; propionyl-CoA carboxylase 3771919..3773514 Methylocella silvestris BL2 7092619 YP_002363691.1 CDS Msil_3434 NC_011666.1 3773564 3775444 D PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: swi:Swit_2163 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase L chain ATP-binding 3773564..3775444 Methylocella silvestris BL2 7092457 YP_002363692.1 CDS Msil_3435 NC_011666.1 3775444 3775893 D PFAM: MaoC domain protein dehydratase; KEGG: swi:Swit_0956 MaoC domain protein dehydratase; MaoC domain-containing protein dehydratase 3775444..3775893 Methylocella silvestris BL2 7092458 YP_002363693.1 CDS Msil_3436 NC_011666.1 3775890 3776726 D PFAM: HpcH/HpaI aldolase; KEGG: swi:Swit_3238 HpcH/HpaI aldolase; HpcH/HpaI aldolase 3775890..3776726 Methylocella silvestris BL2 7092459 YP_002363694.1 CDS Msil_3437 NC_011666.1 3776863 3777855 D KEGG: mpt:Mpe_B0503 hypothetical protein; hypothetical protein 3776863..3777855 Methylocella silvestris BL2 7092460 YP_002363695.1 CDS Msil_3438 NC_011666.1 3777861 3778664 D PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mpt:Mpe_B0504 phosphatase-like protein; haloacid dehalogenase domain-containing protein hydrolase 3777861..3778664 Methylocella silvestris BL2 7092461 YP_002363696.1 CDS Msil_3439 NC_011666.1 3778715 3779131 D KEGG: mpt:Mpe_B0534 hypothetical protein; hypothetical protein 3778715..3779131 Methylocella silvestris BL2 7092462 YP_002363697.1 CDS Msil_3440 NC_011666.1 3779176 3780585 D KEGG: mpt:Mpe_B0532 hypothetical protein; hypothetical protein 3779176..3780585 Methylocella silvestris BL2 7092463 YP_002363698.1 CDS Msil_3441 NC_011666.1 3780589 3781209 D KEGG: mpt:Mpe_B0535 hypothetical protein; hypothetical protein 3780589..3781209 Methylocella silvestris BL2 7092464 YP_002363699.1 CDS Msil_3442 NC_011666.1 3781202 3783694 D PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: mpt:Mpe_B0506 pyruvate phosphate dikinase; PEP/pyruvate-binding pyruvate phosphate dikinase 3781202..3783694 Methylocella silvestris BL2 7092465 YP_002363700.1 CDS Msil_3443 NC_011666.1 3783782 3786007 D PFAM: GAF domain protein; KEGG: mpt:Mpe_B0495 transcriptional regulator, CdaR family; CdaR family transcriptional regulator 3783782..3786007 Methylocella silvestris BL2 7092466 YP_002363701.1 CDS Msil_3445 NC_011666.1 3786853 3788733 D PFAM: Peptidase S53 propeptide; KEGG: cvi:CV_3519 periplasmic aspartyl protease; peptidase S53 propeptide 3786853..3788733 Methylocella silvestris BL2 7092468 YP_002363702.1 CDS Msil_3448 NC_011666.1 3789967 3791091 D hypothetical protein 3789967..3791091 Methylocella silvestris BL2 7092471 YP_002363703.1 CDS Msil_3449 NC_011666.1 3791109 3791477 D KEGG: mba:Mbar_A1842 hypothetical protein; hypothetical protein 3791109..3791477 Methylocella silvestris BL2 7092472 YP_002363704.1 CDS Msil_3452 NC_011666.1 3792661 3793767 D PFAM: sodium/calcium exchanger membrane region; KEGG: smd:Smed_6447 calcium/proton exchanger; sodium/calcium exchanger membrane protein 3792661..3793767 Methylocella silvestris BL2 7092475 YP_002363705.1 CDS Msil_3453 NC_011666.1 3794032 3795591 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mrd:Mrad2831_1607 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter complement(3794032..3795591) Methylocella silvestris BL2 7092476 YP_002363706.1 CDS Msil_3454 NC_011666.1 3795578 3796720 R PFAM: secretion protein HlyD family protein; KEGG: met:M446_6591 secretion protein HlyD family protein; secretion protein HlyD family protein complement(3795578..3796720) Methylocella silvestris BL2 7092477 YP_002363707.1 CDS Msil_3455 NC_011666.1 3796912 3797649 D PFAM: regulatory protein TetR; KEGG: bja:blr4685 transcriptional regulatory protein; TetR family transcriptional regulator 3796912..3797649 Methylocella silvestris BL2 7092478 YP_002363708.1 CDS Msil_3456 NC_011666.1 3797696 3798607 D TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sme:SMc00956 probable exodeoxyribonuclease III protein; exodeoxyribonuclease III Xth 3797696..3798607 Methylocella silvestris BL2 7092479 YP_002363709.1 CDS Msil_3457 NC_011666.1 3798870 3799838 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: azc:AZC_3800 putative cobalamin synthesis protein; cobalamin synthesis protein P47K 3798870..3799838 Methylocella silvestris BL2 7092480 YP_002363710.1 CDS Msil_3458 NC_011666.1 3799871 3800371 D KEGG: rle:pRL110126 putative transmembrane protein; putative transmembrane protein 3799871..3800371 Methylocella silvestris BL2 7092481 YP_002363711.1 CDS Msil_3459 NC_011666.1 3800400 3801137 D PFAM: nitrile hydratase beta subunit; KEGG: rle:pRL110125 putative low-molecular weight cobalt-containing nitrile hydratase subunit beta; nitrile hydratase subunit beta 3800400..3801137 Methylocella silvestris BL2 7092482 YP_002363712.1 CDS Msil_3460 NC_011666.1 3801155 3801772 D KEGG: rle:pRL110124 putative cobalt-containing nitrile hydratase subunit alpha; TIGRFAM: nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain; nitrile hydratase subunit alpha 3801155..3801772 Methylocella silvestris BL2 7092483 YP_002363713.1 CDS Msil_3461 NC_011666.1 3801780 3802127 D KEGG: azc:AZC_3796 putative transmembrane nitrile hydratase; putative transmembrane nitrile hydratase 3801780..3802127 Methylocella silvestris BL2 7092484 YP_002363714.1 CDS Msil_3462 NC_011666.1 3802199 3802420 D KEGG: bur:Bcep18194_B0359 hypothetical protein; hypothetical protein 3802199..3802420 Methylocella silvestris BL2 7092485 YP_002363715.1 CDS Msil_3463 NC_011666.1 3802432 3803190 D KEGG: ret:RHE_CH03437 hypothetical protein; hypothetical protein 3802432..3803190 Methylocella silvestris BL2 7092486 YP_002363716.1 CDS Msil_3464 NC_011666.1 3803239 3803352 R hypothetical protein complement(3803239..3803352) Methylocella silvestris BL2 7092487 YP_002363717.1 CDS Msil_3465 NC_011666.1 3803386 3804369 D PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: azc:AZC_3794 AraC-like protein; AraC family transcriptional regulator 3803386..3804369 Methylocella silvestris BL2 7092488 YP_002363718.1 CDS Msil_3467 NC_011666.1 3804811 3805668 D KEGG: bid:Bind_0369 TonB-dependent receptor; TonB-dependent receptor 3804811..3805668 Methylocella silvestris BL2 7092490 YP_002363719.1 CDS Msil_3468 NC_011666.1 3805697 3806494 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpt:Rpal_2553 ABC transporter related; ABC transporter-like protein complement(3805697..3806494) Methylocella silvestris BL2 7092491 YP_002363720.1 CDS Msil_3469 NC_011666.1 3806487 3807506 R PFAM: transport system permease protein; KEGG: spe:Spro_1373 transport system permease protein; transport system permease complement(3806487..3807506) Methylocella silvestris BL2 7092492 YP_002363721.1 CDS Msil_3470 NC_011666.1 3807826 3809352 D PFAM: oxidoreductase/nitrogenase component 1; KEGG: rsh:Rsph17029_2191 nitrogenase molybdenum-iron protein alpha chain; nitrogenase 3807826..3809352 Methylocella silvestris BL2 7092493 YP_002363722.1 CDS Msil_3471 NC_011666.1 3809487 3811673 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mms:mma_0756 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 3809487..3811673 Methylocella silvestris BL2 7092494 YP_002363723.1 CDS Msil_3472 NC_011666.1 3811682 3812722 D hypothetical protein 3811682..3812722 Methylocella silvestris BL2 7092495 YP_002363724.1 CDS Msil_3473 NC_011666.1 3812738 3813832 D PFAM: periplasmic binding protein; KEGG: rpa:RPA2308 periplasmic iron siderophore binding protein of ABC transporter; periplasmic binding protein 3812738..3813832 Methylocella silvestris BL2 7092496 YP_002363725.1 CDS Msil_3474 NC_011666.1 3814647 3817157 D KEGG: bid:Bind_0680 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 3814647..3817157 Methylocella silvestris BL2 7092498 YP_002363726.1 CDS Msil_3475 NC_011666.1 3817221 3817394 D KEGG: rpb:RPB_1306 hypothetical protein; hypothetical protein 3817221..3817394 Methylocella silvestris BL2 7092499 YP_002363727.1 CDS Msil_3476 NC_011666.1 3817764 3818258 D PFAM: protein of unknown function UPF0040; KEGG: bid:Bind_0683 protein of unknown function UPF0040; hypothetical protein 3817764..3818258 Methylocella silvestris BL2 7092500 YP_002363728.1 CDS mraW NC_011666.1 3818255 3819295 D TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: bid:Bind_0684 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 3818255..3819295 Methylocella silvestris BL2 7092501 YP_002363729.1 CDS Msil_3478 NC_011666.1 3819310 3819690 D KEGG: bid:Bind_0685 hypothetical protein; hypothetical protein 3819310..3819690 Methylocella silvestris BL2 7092502 YP_002363730.1 CDS Msil_3479 NC_011666.1 3819713 3821512 D PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: bid:Bind_0686 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 3819713..3821512 Methylocella silvestris BL2 7092503 YP_002363731.1 CDS Msil_3480 NC_011666.1 3821512 3822984 D TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: bid:Bind_0687 UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramyl tripeptide synthetase 3821512..3822984 Methylocella silvestris BL2 7092504 YP_002363732.1 CDS Msil_3481 NC_011666.1 3822981 3824477 D TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: bid:Bind_0688 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 3822981..3824477 Methylocella silvestris BL2 7092505 YP_002363733.1 CDS mraY NC_011666.1 3824479 3825561 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 3824479..3825561 Methylocella silvestris BL2 7092506 YP_002363734.1 CDS murD NC_011666.1 3825564 3826949 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 3825564..3826949 Methylocella silvestris BL2 7092507 YP_002363735.1 CDS Msil_3484 NC_011666.1 3827011 3827403 R PFAM: PilT protein domain protein; KEGG: kra:Krad_2113 PilT protein-like protein; PilT protein domain-containing protein complement(3827011..3827403) Methylocella silvestris BL2 7092508 YP_002363736.1 CDS Msil_3485 NC_011666.1 3827400 3827630 R KEGG: mbb:BCG_1760c hypothetical protein; hypothetical protein complement(3827400..3827630) Methylocella silvestris BL2 7092509 YP_002363737.1 CDS Msil_3486 NC_011666.1 3827868 3829064 D PFAM: cell cycle protein; KEGG: bid:Bind_0691 cell cycle protein; cell cycle protein 3827868..3829064 Methylocella silvestris BL2 7092510 YP_002363738.1 CDS Msil_3487 NC_011666.1 3829061 3830176 D KEGG: bid:Bind_0692 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 3829061..3830176 Methylocella silvestris BL2 7092511 YP_002363739.1 CDS murC NC_011666.1 3830173 3831579 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 3830173..3831579 Methylocella silvestris BL2 7092512 YP_002363740.1 CDS Msil_3489 NC_011666.1 3831620 3832567 D KEGG: azc:AZC_4560 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 3831620..3832567 Methylocella silvestris BL2 7092513 YP_002363741.1 CDS Msil_3490 NC_011666.1 3832583 3832960 D PFAM: Excinuclease ABC C subunit domain protein; KEGG: bja:blr6638 hypothetical protein; excinuclease ABC C subunit domain-containing protein 3832583..3832960 Methylocella silvestris BL2 7092514 YP_002363742.1 CDS Msil_3491 NC_011666.1 3832957 3833088 D hypothetical protein 3832957..3833088 Methylocella silvestris BL2 7092515 YP_002363743.1 CDS ddl NC_011666.1 3833085 3834008 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 3833085..3834008 Methylocella silvestris BL2 7092516 YP_002363744.1 CDS Msil_3493 NC_011666.1 3833975 3834955 D PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: bid:Bind_0696 polypeptide-transport-associated domain protein FtsQ-type; cell division protein FtsQ 3833975..3834955 Methylocella silvestris BL2 7092517 YP_002363745.1 CDS Msil_3494 NC_011666.1 3834952 3836268 D PFAM: cell division protein FtsA; KEGG: bid:Bind_0697 cell division protein FtsA; cell division protein FtsA 3834952..3836268 Methylocella silvestris BL2 7092518 YP_002363746.1 CDS Msil_3495 NC_011666.1 3836463 3838172 D TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: bid:Bind_0698 cell division protein FtsZ; cell division protein FtsZ 3836463..3838172 Methylocella silvestris BL2 7092519 YP_002363747.1 CDS Msil_3496 NC_011666.1 3838422 3839288 D TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: bid:Bind_0699 DNA uptake lipoprotein-like protein; outer membrane assembly lipoprotein YfiO 3838422..3839288 Methylocella silvestris BL2 7092520 YP_002363748.1 CDS Msil_3497 NC_011666.1 3839440 3841101 D TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: bid:Bind_0700 DNA repair protein RecN; DNA repair protein RecN 3839440..3841101 Methylocella silvestris BL2 7092521 YP_002363749.1 CDS Msil_3498 NC_011666.1 3841443 3843065 D TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mac:MA1838 cell surface protein; 40-residue YVTN family beta-propeller repeat-containing protein 3841443..3843065 Methylocella silvestris BL2 7092522 YP_002363750.1 CDS Msil_3499 NC_011666.1 3843127 3845229 D KEGG: bid:Bind_0706 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: NAD-dependent DNA ligase; NAD-dependent DNA ligase 3843127..3845229 Methylocella silvestris BL2 7092523 YP_002363751.1 CDS Msil_3500 NC_011666.1 3845387 3846406 D PFAM: amidohydrolase 2; KEGG: rle:pRL120216 putative amidohydrolase; amidohydrolase 2 3845387..3846406 Methylocella silvestris BL2 7092524 YP_002363752.1 CDS Msil_3501 NC_011666.1 3846403 3848199 D PFAM: sulfatase; KEGG: bur:Bcep18194_B2021 sulfatase; sulfatase 3846403..3848199 Methylocella silvestris BL2 7092525 YP_002363753.1 CDS Msil_3502 NC_011666.1 3848332 3848721 R PFAM: PRC-barrel domain protein; KEGG: azc:AZC_4605 PRC-barrel domain-containing protein; PRC-barrel domain-containing protein complement(3848332..3848721) Methylocella silvestris BL2 7092526 YP_002363754.1 CDS Msil_3503 NC_011666.1 3848914 3849510 R TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bid:Bind_0709 periplasmic protein thiol--disulphide oxidoreductase DsbE; protein thiol/disulfide oxidoreductase DsbE complement(3848914..3849510) Methylocella silvestris BL2 7092527 YP_002363755.1 CDS Msil_3504 NC_011666.1 3849507 3849677 R TIGRFAM: heme exporter protein CcmD; KEGG: bid:Bind_0710 hypothetical protein; heme exporter protein CcmD complement(3849507..3849677) Methylocella silvestris BL2 7092528 YP_002363756.1 CDS Msil_3505 NC_011666.1 3849674 3850438 R TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: bid:Bind_0711 heme exporter protein CcmC; heme exporter protein CcmC complement(3849674..3850438) Methylocella silvestris BL2 7092529 YP_002363757.1 CDS Msil_3506 NC_011666.1 3850909 3851565 R KEGG: ddgr:GH21940-PA.; hypothetical protein complement(3850909..3851565) Methylocella silvestris BL2 7092530 YP_002363758.1 CDS Msil_3507 NC_011666.1 3851700 3852419 R TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: bid:Bind_1179 heme exporter protein CcmB; heme exporter protein CcmB complement(3851700..3852419) Methylocella silvestris BL2 7092531 YP_002363759.1 CDS Msil_3508 NC_011666.1 3852416 3853024 R KEGG: bid:Bind_1180 heme exporter protein CcmA; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase; heme exporter protein CcmA complement(3852416..3853024) Methylocella silvestris BL2 7092532 YP_002363760.1 CDS Msil_3509 NC_011666.1 3853154 3855886 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 3853154..3855886 Methylocella silvestris BL2 7092533 YP_002363761.1 CDS Msil_3510 NC_011666.1 3856164 3857276 D KEGG: bid:Bind_1182 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 3856164..3857276 Methylocella silvestris BL2 7092534 YP_002363762.1 CDS Msil_3511 NC_011666.1 3857534 3858103 D KEGG: nha:Nham_2497 putative cytochrome P460; putative cytochrome P460 3857534..3858103 Methylocella silvestris BL2 7092535 YP_002363763.1 CDS Msil_3512 NC_011666.1 3858288 3858644 R KEGG: bid:Bind_1184 hypothetical protein; hypothetical protein complement(3858288..3858644) Methylocella silvestris BL2 7092536 YP_002363764.1 CDS Msil_3513 NC_011666.1 3858694 3859554 R KEGG: rpd:RPD_0492 hypothetical protein; hypothetical protein complement(3858694..3859554) Methylocella silvestris BL2 7092537 YP_002363765.1 CDS Msil_3514 NC_011666.1 3859815 3860888 D KEGG: bid:Bind_1186 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; aspartate-semialdehyde dehydrogenase 3859815..3860888 Methylocella silvestris BL2 7092329 YP_002363766.1 CDS Msil_3515 NC_011666.1 3860932 3861135 R KEGG: mrd:Mrad2831_2632 hypothetical protein; hypothetical protein complement(3860932..3861135) Methylocella silvestris BL2 7092372 YP_002363767.1 CDS Msil_3516 NC_011666.1 3861228 3862220 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mfa:Mfla_0397 AraC family transcriptional regulator; AraC family transcriptional regulator complement(3861228..3862220) Methylocella silvestris BL2 7092373 YP_002363768.1 CDS Msil_3517 NC_011666.1 3862378 3862833 D KEGG: mfa:Mfla_0398 hypothetical protein; hypothetical protein 3862378..3862833 Methylocella silvestris BL2 7092374 YP_002363769.1 CDS Msil_3518 NC_011666.1 3862873 3863940 R PFAM: conserved hypothetical protein; KEGG: bid:Bind_2411 hypothetical protein; hypothetical protein complement(3862873..3863940) Methylocella silvestris BL2 7092375 YP_002363770.1 CDS Msil_3519 NC_011666.1 3864132 3865634 R PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: bid:Bind_2410 protein of unknown function DUF463 YcjX family protein; hypothetical protein complement(3864132..3865634) Methylocella silvestris BL2 7092376 YP_002363771.1 CDS Msil_3520 NC_011666.1 3865763 3866812 R KEGG: bid:Bind_2409 hypothetical protein; hypothetical protein complement(3865763..3866812) Methylocella silvestris BL2 7092377 YP_002363772.1 CDS Msil_3521 NC_011666.1 3866869 3867396 R PFAM: phosphoglycerate mutase; KEGG: mpo:Mpop_5166 putative phosphohistidine phosphatase, SixA; putative phosphohistidine phosphatase SixA complement(3866869..3867396) Methylocella silvestris BL2 7092378 YP_002363773.1 CDS Msil_3522 NC_011666.1 3867548 3867943 R TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: bid:Bind_2407 hypothetical protein; phasin family protein complement(3867548..3867943) Methylocella silvestris BL2 7092379 YP_002363774.1 CDS alaS NC_011666.1 3868028 3870715 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(3868028..3870715) Methylocella silvestris BL2 7092380 YP_002363775.1 CDS Msil_3524 NC_011666.1 3870900 3871967 R KEGG: bid:Bind_2403 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase; recA protein complement(3870900..3871967) Methylocella silvestris BL2 7092381 YP_002363776.1 CDS Msil_3525 NC_011666.1 3872373 3872870 D KEGG: bid:Bind_2402 hypothetical protein; hypothetical protein 3872373..3872870 Methylocella silvestris BL2 7092382 YP_002363777.1 CDS Msil_3526 NC_011666.1 3872963 3873277 D KEGG: bid:Bind_2401 hypothetical protein; hypothetical protein 3872963..3873277 Methylocella silvestris BL2 7092383 YP_002363778.1 CDS Msil_3527 NC_011666.1 3873327 3875846 R KEGG: bid:Bind_1983 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase complement(3873327..3875846) Methylocella silvestris BL2 7092384 YP_002363779.1 CDS Msil_3528 NC_011666.1 3876185 3877537 D KEGG: bid:Bind_1985 hypothetical protein; hypothetical protein 3876185..3877537 Methylocella silvestris BL2 7092385 YP_002363780.1 CDS Msil_3529 NC_011666.1 3877622 3878041 R TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: bid:Bind_1132 transcriptional regulator, TraR/DksA family; TraR/DksA family transcriptional regulator complement(3877622..3878041) Methylocella silvestris BL2 7092386 YP_002363781.1 CDS Msil_3530 NC_011666.1 3878211 3879434 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(3878211..3879434) Methylocella silvestris BL2 7092387 YP_002363782.1 CDS Msil_3531 NC_011666.1 3879536 3880285 R KEGG: rru:Rru_A1491 hypothetical protein; hypothetical protein complement(3879536..3880285) Methylocella silvestris BL2 7092388 YP_002363783.1 CDS Msil_3532 NC_011666.1 3880354 3881121 R PFAM: metallophosphoesterase; KEGG: bid:Bind_1134 metallophosphoesterase; metallophosphoesterase complement(3880354..3881121) Methylocella silvestris BL2 7092389 YP_002363784.1 CDS Msil_3533 NC_011666.1 3881217 3882779 R PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: bid:Bind_2370 adenylate cyclase; CHAD domain-containing protein complement(3881217..3882779) Methylocella silvestris BL2 7092390 YP_002363785.1 CDS Msil_3534 NC_011666.1 3883238 3883606 D hypothetical protein 3883238..3883606 Methylocella silvestris BL2 7092391 YP_002363786.1 CDS Msil_3535 NC_011666.1 3883615 3884139 R PFAM: ChaC family protein; KEGG: bid:Bind_3560 ChaC family protein; ChaC family protein complement(3883615..3884139) Methylocella silvestris BL2 7092392 YP_002363787.1 CDS Msil_3536 NC_011666.1 3884210 3885262 D KEGG: bid:Bind_3559 hypothetical protein; hypothetical protein 3884210..3885262 Methylocella silvestris BL2 7092393 YP_002363788.1 CDS Msil_3537 NC_011666.1 3885444 3886910 R TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bid:Bind_1034 undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase complement(3885444..3886910) Methylocella silvestris BL2 7092394 YP_002363789.1 CDS thrS NC_011666.1 3887215 3889161 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(3887215..3889161) Methylocella silvestris BL2 7092395 YP_002363790.1 CDS Msil_3539 NC_011666.1 3889845 3890534 D SMART: regulatory protein LuxR; KEGG: bja:blr2746 transcriptional regulatory protein; LuxR family transcriptional regulator 3889845..3890534 Methylocella silvestris BL2 7092396 YP_002363791.1 CDS Msil_3540 NC_011666.1 3890613 3891089 R KEGG: bid:Bind_3561 hypothetical protein; hypothetical protein complement(3890613..3891089) Methylocella silvestris BL2 7092397 YP_002363792.1 CDS Msil_3541 NC_011666.1 3891207 3891959 R PFAM: phospholipid/glycerol acyltransferase; KEGG: bid:Bind_3562 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(3891207..3891959) Methylocella silvestris BL2 7092398 YP_002363793.1 CDS Msil_3542 NC_011666.1 3892195 3892446 R KEGG: nwi:Nwi_0739 hypothetical protein; hypothetical protein complement(3892195..3892446) Methylocella silvestris BL2 7092399 YP_002363794.1 CDS Msil_3543 NC_011666.1 3892625 3893632 D PFAM: regulatory protein ArsR; UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: bid:Bind_1121 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 3892625..3893632 Methylocella silvestris BL2 7092400 YP_002363795.1 CDS Msil_3544 NC_011666.1 3893629 3894549 D KEGG: bid:Bind_1122 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 3893629..3894549 Methylocella silvestris BL2 7092401 YP_002363796.1 CDS metH NC_011666.1 3894550 3898287 D one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 3894550..3898287 Methylocella silvestris BL2 7092402 YP_002363797.1 CDS Msil_3546 NC_011666.1 3898320 3899087 R PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: mrd:Mrad2831_2007 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD complement(3898320..3899087) Methylocella silvestris BL2 7092403 YP_002363798.1 CDS Msil_3547 NC_011666.1 3899074 3899412 R KEGG: bid:Bind_2349 hypothetical protein; hypothetical protein complement(3899074..3899412) Methylocella silvestris BL2 7092404 YP_002363799.1 CDS Msil_3548 NC_011666.1 3900034 3907017 R PFAM: Apolipoprotein A1/A4/E; KEGG: mrd:Mrad2831_1948 hypothetical protein; apolipoprotein A1/A4/E complement(3900034..3907017) Methylocella silvestris BL2 7092406 YP_002363800.1 CDS Msil_3549 NC_011666.1 3907494 3907814 D PFAM: ferredoxin; KEGG: bid:Bind_2346 ferredoxin; ferredoxin 3907494..3907814 Methylocella silvestris BL2 7092407 YP_002363801.1 CDS Msil_3550 NC_011666.1 3908033 3909070 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: bid:Bind_2345 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3908033..3909070 Methylocella silvestris BL2 7092408 YP_002363802.1 CDS coaD NC_011666.1 3909101 3909604 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 3909101..3909604 Methylocella silvestris BL2 7092409 YP_002363803.1 CDS Msil_3552 NC_011666.1 3909634 3910194 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bid:Bind_2343 peptidyl-prolyl cis-trans isomerase cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 3909634..3910194 Methylocella silvestris BL2 7092410 YP_002363804.1 CDS Msil_3553 NC_011666.1 3910373 3910828 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bid:Bind_2337 peptidyl-prolyl cis-trans isomerase cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 3910373..3910828 Methylocella silvestris BL2 7092411 YP_002363805.1 CDS queA NC_011666.1 3910872 3911957 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 3910872..3911957 Methylocella silvestris BL2 7092412 YP_002363806.1 CDS Msil_3555 NC_011666.1 3911954 3913090 D KEGG: bid:Bind_2335 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 3911954..3913090 Methylocella silvestris BL2 7092413 YP_002363807.1 CDS Msil_3556 NC_011666.1 3913090 3913737 D PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_C7686 glutathione S-transferase-like protein; glutathione S-transferase domain-containing protein 3913090..3913737 Methylocella silvestris BL2 7092414 YP_002363808.1 CDS Msil_3557 NC_011666.1 3913771 3914874 R PFAM: Choloylglycine hydrolase; KEGG: oan:Oant_1703 penicillin amidase; Penicillin amidase complement(3913771..3914874) Methylocella silvestris BL2 7092415 YP_002363809.1 CDS Msil_3558 NC_011666.1 3914939 3916141 R TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bid:Bind_3093 lytic murein transglycosylase; lytic murein transglycosylase complement(3914939..3916141) Methylocella silvestris BL2 7092416 YP_002363810.1 CDS Msil_3559 NC_011666.1 3916138 3919281 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bid:Bind_3092 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(3916138..3919281) Methylocella silvestris BL2 7092417 YP_002363811.1 CDS Msil_3560 NC_011666.1 3919308 3920489 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bid:Bind_3091 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(3919308..3920489) Methylocella silvestris BL2 7092418 YP_002363812.1 CDS Msil_3561 NC_011666.1 3920683 3921969 R PFAM: Lytic transglycosylase catalytic; KEGG: bid:Bind_2746 lytic transglycosylase catalytic; lytic transglycosylase complement(3920683..3921969) Methylocella silvestris BL2 7092419 YP_002363813.1 CDS Msil_3562 NC_011666.1 3922174 3922953 R TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: oan:Oant_0954 succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein complement(3922174..3922953) Methylocella silvestris BL2 7092420 YP_002363814.1 CDS sdhA NC_011666.1 3923014 3924852 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(3923014..3924852) Methylocella silvestris BL2 7092421 YP_002363815.1 CDS Msil_3564 NC_011666.1 3924921 3925310 R TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bid:Bind_2750 succinate dehydrogenase, hydrophobic membrane anchor protein; succinate dehydrogenase, hydrophobic membrane anchor protein complement(3924921..3925310) Methylocella silvestris BL2 7092422 YP_002363816.1 CDS Msil_3565 NC_011666.1 3925368 3925763 R TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bid:Bind_2751 succinate dehydrogenase, cytochrome b556 subunit; succinate dehydrogenase, cytochrome b556 subunit complement(3925368..3925763) Methylocella silvestris BL2 7092423 YP_002363817.1 CDS Msil_3566 NC_011666.1 3926085 3927080 D KEGG: bid:Bind_2752 phospholipase/carboxylesterase; phospholipase/carboxylesterase 3926085..3927080 Methylocella silvestris BL2 7092424 YP_002363818.1 CDS Msil_3567 NC_011666.1 3927097 3927453 R PFAM: protein of unknown function DUF167; KEGG: bbt:BBta_0270 hypothetical protein; hypothetical protein complement(3927097..3927453) Methylocella silvestris BL2 7092425 YP_002363819.1 CDS Msil_3568 NC_011666.1 3927450 3927740 R PFAM: protein of unknown function YGGT; KEGG: bid:Bind_2879 protein of unknown function YGGT; hypothetical protein complement(3927450..3927740) Methylocella silvestris BL2 7092426 YP_002363820.1 CDS Msil_3569 NC_011666.1 3928899 3929123 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: nwi:Nwi_0784 prevent-host-death protein; prevent-host-death family protein 3928899..3929123 Methylocella silvestris BL2 7092428 YP_002363821.1 CDS Msil_3570 NC_011666.1 3929158 3931101 D PFAM: N-6 DNA methylase; KEGG: mma:MM_2981 type I restriction-modification system specificity subunit; N-6 DNA methylase 3929158..3931101 Methylocella silvestris BL2 7092429 YP_002363822.1 CDS Msil_3571 NC_011666.1 3931098 3932474 D KEGG: mca:MCA0277 hypothetical protein; hypothetical protein 3931098..3932474 Methylocella silvestris BL2 7092430 YP_002363823.1 CDS Msil_3572 NC_011666.1 3932474 3932965 D hypothetical protein 3932474..3932965 Methylocella silvestris BL2 7092431 YP_002363824.1 CDS Msil_3573 NC_011666.1 3932968 3933621 D KEGG: pla:Plav_2928 hypothetical protein; hypothetical protein 3932968..3933621 Methylocella silvestris BL2 7092432 YP_002363825.1 CDS Msil_3575 NC_011666.1 3934665 3937595 D PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; KEGG: mma:MM_2976 type I restriction-modification system restriction subunit; hypothetical protein 3934665..3937595 Methylocella silvestris BL2 7092434 YP_002363826.1 CDS Msil_3576 NC_011666.1 3938039 3938191 D hypothetical protein 3938039..3938191 Methylocella silvestris BL2 7092435 YP_002363827.1 CDS Msil_3577 NC_011666.1 3938651 3939379 R PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: smd:Smed_6518 IstB domain protein ATP-binding protein; IstB domain-containing protein ATP-binding protein complement(3938651..3939379) Methylocella silvestris BL2 7092436 YP_002363828.1 CDS Msil_3579 NC_011666.1 3940807 3941073 D KEGG: rfr:Rfer_2440 NAD-dependent epimerase/dehydratase; hypothetical protein 3940807..3941073 Methylocella silvestris BL2 7092438 YP_002363829.1 CDS Msil_3580 NC_011666.1 3941148 3941576 D KEGG: pla:Plav_1755 resolvase domain-containing protein; hypothetical protein 3941148..3941576 Methylocella silvestris BL2 7092439 YP_002363830.1 CDS Msil_3581 NC_011666.1 3941798 3941917 D hypothetical protein 3941798..3941917 Methylocella silvestris BL2 7092440 YP_002363831.1 CDS Msil_3583 NC_011666.1 3942105 3942383 R PFAM: transposase IS3/IS911 family protein; KEGG: mpo:Mpop_3816 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(3942105..3942383) Methylocella silvestris BL2 7092442 YP_002363832.1 CDS Msil_3584 NC_011666.1 3942529 3943353 D PFAM: alpha/beta hydrolase fold; KEGG: rha:RHA1_ro01401 chloride peroxidase; alpha/beta hydrolase fold protein 3942529..3943353 Methylocella silvestris BL2 7092443 YP_002363833.1 CDS Msil_3585 NC_011666.1 3943491 3943994 D KEGG: aba:Acid345_3747 putative cytochrome P460; putative cytochrome P460 3943491..3943994 Methylocella silvestris BL2 7092444 YP_002363834.1 CDS Msil_3586 NC_011666.1 3944001 3944261 R KEGG: scl:sce7478 small membrane protein; small membrane protein complement(3944001..3944261) Methylocella silvestris BL2 7092445 YP_002363835.1 CDS Msil_3587 NC_011666.1 3944258 3945502 R KEGG: bxe:Bxe_B2044 hypothetical protein; hypothetical protein complement(3944258..3945502) Methylocella silvestris BL2 7092446 YP_002363836.1 CDS Msil_3588 NC_011666.1 3945900 3948140 R PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: met:M446_2671 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase complement(3945900..3948140) Methylocella silvestris BL2 7092447 YP_002363837.1 CDS Msil_3589 NC_011666.1 3948167 3949183 R PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mex:Mext_0836 molybdopterin dehydrogenase FAD-binding; molybdopterin dehydrogenase complement(3948167..3949183) Methylocella silvestris BL2 7092448 YP_002363838.1 CDS Msil_3590 NC_011666.1 3949180 3949719 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bbt:BBta_6206 putative xanthine dehydrogenase YagT-like, iron-sulfur binding subunit; (2Fe-2S)-binding domain-containing protein complement(3949180..3949719) Methylocella silvestris BL2 7092449 YP_002363839.1 CDS Msil_3591 NC_011666.1 3949908 3951860 R KEGG: mes:Meso_1904 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase complement(3949908..3951860) Methylocella silvestris BL2 7092450 YP_002363840.1 CDS Msil_3592 NC_011666.1 3951980 3953062 R PFAM: ribonuclease BN; KEGG: met:M446_1426 ribonuclease BN; ribonuclease BN complement(3951980..3953062) Methylocella silvestris BL2 7092451 YP_002363841.1 CDS Msil_3593 NC_011666.1 3953649 3954806 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mpo:Mpop_0138 cyclic nucleotide-binding protein; acyl-CoA dehydrogenase domain-containing protein 3953649..3954806 Methylocella silvestris BL2 7092452 YP_002363842.1 CDS Msil_3594 NC_011666.1 3954806 3955546 D PFAM: LmbE family protein; KEGG: mpo:Mpop_1164 LmbE family protein; LmbE family protein 3954806..3955546 Methylocella silvestris BL2 7091751 YP_002363843.1 CDS Msil_3595 NC_011666.1 3955543 3956121 D PFAM: NodS family protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: mpo:Mpop_4304 methyltransferase type 12; type 12 methyltransferase 3955543..3956121 Methylocella silvestris BL2 7092868 YP_002363844.1 CDS Msil_3596 NC_011666.1 3956027 3957283 R PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4212 glycosyl transferase family 2; family 2 glycosyl transferase complement(3956027..3957283) Methylocella silvestris BL2 7092869 YP_002363845.1 CDS Msil_3597 NC_011666.1 3957389 3959473 R PFAM: Catalase domain protein; KEGG: cak:Caul_0211 catalase; catalase complement(3957389..3959473) Methylocella silvestris BL2 7092870 YP_002363846.1 CDS Msil_3599 NC_011666.1 3961184 3962911 D PFAM: Carboxylesterase type B; KEGG: sma:SAV433 carboxylesterase; carboxylesterase type B 3961184..3962911 Methylocella silvestris BL2 7092872 YP_002363847.1 CDS Msil_3600 NC_011666.1 3963129 3964883 D PFAM: beta-lactamase; KEGG: lch:Lcho_3794 fibronectin type III domain protein; beta-lactamase 3963129..3964883 Methylocella silvestris BL2 7092873 YP_002363848.1 CDS Msil_3601 NC_011666.1 3965268 3965588 R hypothetical protein complement(3965268..3965588) Methylocella silvestris BL2 7092874 YP_002363849.1 CDS Msil_3602 NC_011666.1 3965971 3966801 R PFAM: conserved hypothetical protein; KEGG: azc:AZC_4205 hypothetical protein; hypothetical protein complement(3965971..3966801) Methylocella silvestris BL2 7092875 YP_002363850.1 CDS Msil_3603 NC_011666.1 3966868 3969153 R PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: xau:Xaut_3184 glycine cleavage T protein (aminomethyl transferase); glycine cleavage T protein (aminomethyl transferase) complement(3966868..3969153) Methylocella silvestris BL2 7092876 YP_002363851.1 CDS Msil_3604 NC_011666.1 3969206 3970561 R PFAM: flavin-containing monooxygenase FMO; KEGG: gbe:GbCGDNIH1_1825 dimethylaniline monooxygenase (N-oxide forming); flavin-containing monooxygenase complement(3969206..3970561) Methylocella silvestris BL2 7092877 YP_002363852.1 CDS Msil_3605 NC_011666.1 3970603 3971739 R PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: xau:Xaut_0923 glycine cleavage T protein (aminomethyl transferase); glycine cleavage T protein (aminomethyl transferase) complement(3970603..3971739) Methylocella silvestris BL2 7092878 YP_002363853.1 CDS Msil_3606 NC_011666.1 3971911 3973626 R PFAM: amino acid permease-associated region; KEGG: xau:Xaut_0922 amino acid permease-associated region; amino acid permease-associated protein complement(3971911..3973626) Methylocella silvestris BL2 7092879 YP_002363854.1 CDS Msil_3607 NC_011666.1 3974024 3974611 D KEGG: xau:Xaut_3182 hypothetical protein; hypothetical protein 3974024..3974611 Methylocella silvestris BL2 7092880 YP_002363855.1 CDS Msil_3608 NC_011666.1 3974608 3975561 D PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: xau:Xaut_3181 ferredoxin; ferredoxin 3974608..3975561 Methylocella silvestris BL2 7092881 YP_002363856.1 CDS Msil_3609 NC_011666.1 3975648 3976703 D KEGG: xau:Xaut_3180 hypothetical protein; hypothetical protein 3975648..3976703 Methylocella silvestris BL2 7092882 YP_002363857.1 CDS Msil_3610 NC_011666.1 3976846 3977694 D hypothetical protein 3976846..3977694 Methylocella silvestris BL2 7092883 YP_002363858.1 CDS Msil_3611 NC_011666.1 3977746 3978534 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cak:Caul_3390 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3977746..3978534) Methylocella silvestris BL2 7092884 YP_002363859.1 CDS Msil_3612 NC_011666.1 3978648 3979571 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mes:Meso_3053 transcriptional regulator, LysR family; LysR family transcriptional regulator 3978648..3979571 Methylocella silvestris BL2 7092885 YP_002363860.1 CDS Msil_3613 NC_011666.1 3979578 3979871 R KEGG: bid:Bind_0490 putative ferredoxin protein, FixX; putative ferredoxin protein, FixX complement(3979578..3979871) Methylocella silvestris BL2 7092886 YP_002363861.1 CDS Msil_3614 NC_011666.1 3979894 3981201 R PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: bbt:BBta_5870 FixC protein; FAD dependent oxidoreductase complement(3979894..3981201) Methylocella silvestris BL2 7092887 YP_002363862.1 CDS Msil_3615 NC_011666.1 3981218 3982324 R PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: bbt:BBta_5871 protein FixB; electron transfer flavoprotein subunit alpha complement(3981218..3982324) Methylocella silvestris BL2 7092888 YP_002363863.1 CDS Msil_3616 NC_011666.1 3982335 3983186 R PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bbt:BBta_5872 protein FixA; electron transfer flavoprotein subunit alpha/beta complement(3982335..3983186) Methylocella silvestris BL2 7092889 YP_002363864.1 CDS Msil_3617 NC_011666.1 3983209 3983565 R PFAM: nitrogen fixation protein NifW; KEGG: rpa:RPA4606 nitrogenase stabilizing/protective protein; nitrogen fixation protein NifW complement(3983209..3983565) Methylocella silvestris BL2 7092890 YP_002363865.1 CDS Msil_3618 NC_011666.1 3983562 3984317 R TIGRFAM: serine O-acetyltransferase; KEGG: xau:Xaut_0151 serine O-acetyltransferase; serine O-acetyltransferase complement(3983562..3984317) Methylocella silvestris BL2 7092891 YP_002363866.1 CDS Msil_3619 NC_011666.1 3984314 3985486 R PFAM: pyruvate carboxyltransferase; KEGG: rpa:RPA4607 putative homocitrate synthase; pyruvate carboxyltransferase complement(3984314..3985486) Methylocella silvestris BL2 7092892 YP_002363867.1 CDS Msil_3620 NC_011666.1 3985495 3986697 R TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: xau:Xaut_0108 aminotransferase class V; cysteine desulfurase NifS complement(3985495..3986697) Methylocella silvestris BL2 7092893 YP_002363868.1 CDS Msil_3621 NC_011666.1 3986708 3987742 R TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: met:M446_3582 Fe-S cluster assembly protein NifU; Fe-S cluster assembly protein NifU complement(3986708..3987742) Methylocella silvestris BL2 7092894 YP_002363869.1 CDS Msil_3622 NC_011666.1 3987742 3988062 R TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: azc:AZC_3409 iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly accessory protein complement(3987742..3988062) Methylocella silvestris BL2 7092895 YP_002363870.1 CDS Msil_3623 NC_011666.1 3988258 3988953 R PFAM: NifQ family protein; KEGG: met:M446_3543 NifQ family protein; NifQ family protein complement(3988258..3988953) Methylocella silvestris BL2 7092896 YP_002363871.1 CDS Msil_3624 NC_011666.1 3988958 3989275 R TIGRFAM: ferredoxin III, nif-specific; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mlo:mlr5869 ferredoxin 2[4Fe-4S] III, FdxB; ferredoxin III complement(3988958..3989275) Methylocella silvestris BL2 7092897 YP_002363872.1 CDS Msil_3625 NC_011666.1 3989275 3989475 R PFAM: protein of unknown function DUF683; KEGG: azc:AZC_3451 hypothetical protein; hypothetical protein complement(3989275..3989475) Methylocella silvestris BL2 7092898 YP_002363873.1 CDS Msil_3626 NC_011666.1 3989547 3990014 R TIGRFAM: nitrogen fixation protein; PFAM: protein of unknown function DUF269; KEGG: rpc:RPC_4457 protein of unknown function DUF269; nitrogen fixation protein complement(3989547..3990014) Methylocella silvestris BL2 7092899 YP_002363874.1 CDS Msil_3627 NC_011666.1 3990016 3990417 R TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: xau:Xaut_0093 nitrogen fixation protein NifX; nitrogen fixation protein NifX complement(3990016..3990417) Methylocella silvestris BL2 7092900 YP_002363875.1 CDS Msil_3628 NC_011666.1 3990414 3991808 R KEGG: mca:MCA0234 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron cofactor biosynthesis protein NifN complement(3990414..3991808) Methylocella silvestris BL2 7092901 YP_002363876.1 CDS Msil_3629 NC_011666.1 3991820 3993268 R KEGG: mca:MCA0233 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase MoFe cofactor biosynthesis protein NifE complement(3991820..3993268) Methylocella silvestris BL2 7092902 YP_002363877.1 CDS Msil_3630 NC_011666.1 3993436 3994995 R KEGG: bbt:BBta_5923 nitrogenase molybdenum-iron protein beta chain, NifK; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit beta complement(3993436..3994995) Methylocella silvestris BL2 7092903 YP_002363878.1 CDS Msil_3631 NC_011666.1 3995068 3996534 R KEGG: mca:MCA0230 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit alpha complement(3995068..3996534) Methylocella silvestris BL2 7092904 YP_002363879.1 CDS nifH NC_011666.1 3996609 3997490 R nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis; nitrogenase reductase complement(3996609..3997490) Methylocella silvestris BL2 7092905 YP_002363880.1 CDS Msil_3633 NC_011666.1 3997947 3998381 D PFAM: response regulator receiver; KEGG: mca:MCA0228 response regulator; response regulator receiver protein 3997947..3998381 Methylocella silvestris BL2 7092906 YP_002363881.1 CDS Msil_3634 NC_011666.1 3998540 3999436 R KEGG: rpc:RPC_4464 hypothetical protein; hypothetical protein complement(3998540..3999436) Methylocella silvestris BL2 7092907 YP_002363882.1 CDS Msil_3635 NC_011666.1 3999475 3999699 R KEGG: xau:Xaut_0122 hypothetical protein; hypothetical protein complement(3999475..3999699) Methylocella silvestris BL2 7092908 YP_002363883.1 CDS Msil_3636 NC_011666.1 3999795 4000091 R PFAM: ferredoxin; KEGG: bxe:Bxe_B1458 putative (2Fe-2S) ferredoxin; ferredoxin complement(3999795..4000091) Methylocella silvestris BL2 7092909 YP_002363884.1 CDS Msil_3637 NC_011666.1 4000127 4001275 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: xau:Xaut_0120 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase complement(4000127..4001275) Methylocella silvestris BL2 7092910 YP_002363885.1 CDS Msil_3638 NC_011666.1 4001275 4001544 R KEGG: rpc:RPC_4465 hypothetical protein; hypothetical protein complement(4001275..4001544) Methylocella silvestris BL2 7092911 YP_002363886.1 CDS Msil_3639 NC_011666.1 4001546 4001749 R TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU family protein; KEGG: lch:Lcho_1413 nitrogen fixation protein FixT; nitrogen fixation protein FixT complement(4001546..4001749) Methylocella silvestris BL2 7092912 YP_002363887.1 CDS Msil_3640 NC_011666.1 4001827 4002066 R PFAM: NifZ family protein; KEGG: rpc:RPC_4467 NifZ; NifZ family protein complement(4001827..4002066) Methylocella silvestris BL2 7092913 YP_002363888.1 CDS Msil_3641 NC_011666.1 4002063 4002368 R PFAM: NifZ family protein; KEGG: azc:AZC_3419 iron-sulfur cofactor synthesis protein; NifZ family protein complement(4002063..4002368) Methylocella silvestris BL2 7092914 YP_002363889.1 CDS Msil_3642 NC_011666.1 4002365 4003216 R PFAM: leucine rich repeat variant; LRV FeS4 cluster domain protein; KEGG: azc:AZC_3418 hypothetical protein; LRV FeS4 cluster domain-containing protein complement(4002365..4003216) Methylocella silvestris BL2 7092915 YP_002363890.1 CDS Msil_3643 NC_011666.1 4003206 4003748 R KEGG: rpc:RPC_4469 tetratricopeptide TPR_2; hypothetical protein complement(4003206..4003748) Methylocella silvestris BL2 7092916 YP_002363891.1 CDS Msil_3644 NC_011666.1 4003756 4004112 R PFAM: HesB/YadR/YfhF-family protein; KEGG: pna:Pnap_1576 iron-sulfur cluster assembly accessory protein; HesB/YadR/YfhF-family protein complement(4003756..4004112) Methylocella silvestris BL2 7092917 YP_002363892.1 CDS Msil_3645 NC_011666.1 4004109 4004336 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: xau:Xaut_0112 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin complement(4004109..4004336) Methylocella silvestris BL2 7092918 YP_002363893.1 CDS Msil_3646 NC_011666.1 4004474 4006033 R TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; KEGG: bbt:BBta_5904 nitrogenase FeMo cofactor biosynthesis protein NifB; nitrogenase cofactor biosynthesis protein NifB complement(4004474..4006033) Methylocella silvestris BL2 7092919 YP_002363894.1 CDS Msil_3647 NC_011666.1 4006514 4007356 R KEGG: rpb:RPB_0955 hypothetical protein; hypothetical protein complement(4006514..4007356) Methylocella silvestris BL2 7092920 YP_002363895.1 CDS Msil_3648 NC_011666.1 4007651 4009381 D KEGG: bbt:BBta_5933 NifA subfamily transcriptional regulator; TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Fis Family transcriptional regulator NifA 4007651..4009381 Methylocella silvestris BL2 7092921 YP_002363896.1 CDS Msil_3649 NC_011666.1 4009574 4010164 R KEGG: lch:Lcho_1428 hypothetical protein; hypothetical protein complement(4009574..4010164) Methylocella silvestris BL2 7092922 YP_002363897.1 CDS Msil_3650 NC_011666.1 4010148 4010573 R PFAM: globin; KEGG: bid:Bind_0410 globin; globin complement(4010148..4010573) Methylocella silvestris BL2 7092923 YP_002363898.1 CDS Msil_3651 NC_011666.1 4010770 4011246 R PFAM: ferric-uptake regulator; KEGG: xau:Xaut_3845 ferric uptake regulator family protein; Fur family ferric uptake regulator complement(4010770..4011246) Methylocella silvestris BL2 7092924 YP_002363899.1 CDS mscL NC_011666.1 4011507 4011911 R homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel complement(4011507..4011911) Methylocella silvestris BL2 7092925 YP_002363900.1 CDS Msil_3653 NC_011666.1 4012185 4012406 D KEGG: met:M446_1571 hypothetical protein; hypothetical protein 4012185..4012406 Methylocella silvestris BL2 7092926 YP_002363901.1 CDS Msil_3654 NC_011666.1 4012629 4013114 D PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: acr:Acry_0841 NADH dehydrogenase (ubiquinone), 24 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit 4012629..4013114 Methylocella silvestris BL2 7092927 YP_002363902.1 CDS Msil_3655 NC_011666.1 4013111 4014661 D PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: smd:Smed_2898 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 4013111..4014661 Methylocella silvestris BL2 7092928 YP_002363903.1 CDS Msil_3656 NC_011666.1 4014674 4017520 D TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: xau:Xaut_3479 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha 4014674..4017520 Methylocella silvestris BL2 7092929 YP_002363904.1 CDS Msil_3657 NC_011666.1 4017517 4018374 D TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: rpc:RPC_4644 formate dehydrogenase accessory protein; formate dehydrogenase family accessory protein FdhD 4017517..4018374 Methylocella silvestris BL2 7092930 YP_002363905.1 CDS Msil_3658 NC_011666.1 4018364 4018621 D KEGG: bja:bsl3134 putative NAD-dependent formate dehydrogenase; putative NAD-dependent formate dehydrogenase 4018364..4018621 Methylocella silvestris BL2 7092931 YP_002363906.1 CDS Msil_3659 NC_011666.1 4018919 4020592 D KEGG: xau:Xaut_0459 cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase, cbb3-type subunit I 4018919..4020592 Methylocella silvestris BL2 7092932 YP_002363907.1 CDS Msil_3660 NC_011666.1 4020605 4021372 D TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: azc:AZC_4524 FixO protein; cytochrome c oxidase, cbb3-type subunit II 4020605..4021372 Methylocella silvestris BL2 7092933 YP_002363908.1 CDS Msil_3661 NC_011666.1 4021382 4021534 D PFAM: Cbb3-type cytochrome oxidase component; KEGG: azc:AZC_4525 FixQ protein; cbb3-type cytochrome oxidase subunit 4021382..4021534 Methylocella silvestris BL2 7092934 YP_002363909.1 CDS Msil_3662 NC_011666.1 4021539 4022423 D TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: xau:Xaut_0462 cytochrome c oxidase, cbb3-type, subunit III; cytochrome c oxidase, cbb3-type subunit III 4021539..4022423 Methylocella silvestris BL2 7092935 YP_002363910.1 CDS Msil_3663 NC_011666.1 4022510 4023988 D TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: rpe:RPE_0014 4Fe-4S ferredoxin, iron-sulfur binding domain protein; cytochrome c oxidase accessory protein CcoG 4022510..4023988 Methylocella silvestris BL2 7092936 YP_002363911.1 CDS Msil_3664 NC_011666.1 4024006 4024515 D PFAM: FixH family protein; KEGG: azc:AZC_4528 FixH protein; FixH family protein 4024006..4024515 Methylocella silvestris BL2 7092937 YP_002363912.1 CDS Msil_3665 NC_011666.1 4024718 4026967 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rpe:RPE_0012 copper-translocating P-type ATPase; copper-translocating P-type ATPase 4024718..4026967 Methylocella silvestris BL2 7092938 YP_002363913.1 CDS Msil_3666 NC_011666.1 4026964 4027113 D TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: azc:AZC_4530 hypothetical protein; cbb3-type cytochrome oxidase maturation protein 4026964..4027113 Methylocella silvestris BL2 7092939 YP_002363914.1 CDS Msil_3667 NC_011666.1 4027110 4028225 D KEGG: xau:Xaut_0467 major facilitator transporter; major facilitator transporter 4027110..4028225 Methylocella silvestris BL2 7092940 YP_002363915.1 CDS Msil_3668 NC_011666.1 4028387 4028635 D hypothetical protein 4028387..4028635 Methylocella silvestris BL2 7092941 YP_002363916.1 CDS Msil_3670 NC_011666.1 4030081 4030269 D KEGG: bid:Bind_0289 hypothetical protein; hypothetical protein 4030081..4030269 Methylocella silvestris BL2 7092943 YP_002363917.1 CDS Msil_3671 NC_011666.1 4030345 4032984 D KEGG: bid:Bind_0291 excinuclease ABC, B subunit; TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; type III restriction protein res subunit; SMART: DEAD-like helicases; excinuclease ABC subunit B 4030345..4032984 Methylocella silvestris BL2 7092944 YP_002363918.1 CDS Msil_3672 NC_011666.1 4032993 4034582 R KEGG: art:Arth_3633 hypothetical protein; hypothetical protein complement(4032993..4034582) Methylocella silvestris BL2 7092945 YP_002363919.1 CDS Msil_3673 NC_011666.1 4034693 4034977 D KEGG: bid:Bind_3449 hypothetical protein; hypothetical protein 4034693..4034977 Methylocella silvestris BL2 7092946 YP_002363920.1 CDS Msil_3674 NC_011666.1 4035243 4036061 D KEGG: met:M446_2079 hypothetical protein; hypothetical protein 4035243..4036061 Methylocella silvestris BL2 7092947 YP_002363921.1 CDS Msil_3675 NC_011666.1 4036092 4036907 R TIGRFAM: lytic murein transglycosylase; KEGG: bid:Bind_3366 lytic murein transglycosylase; lytic murein transglycosylase complement(4036092..4036907) Methylocella silvestris BL2 7092948 YP_002363922.1 CDS Msil_3676 NC_011666.1 4037142 4037630 D KEGG: met:M446_2883 hypothetical protein; hypothetical protein 4037142..4037630 Methylocella silvestris BL2 7092949 YP_002363923.1 CDS Msil_3677 NC_011666.1 4037949 4038494 D TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: bid:Bind_3282 molybdenum cofactor synthesis domain protein; molybdenum cofactor synthesis domain-containing protein 4037949..4038494 Methylocella silvestris BL2 7093031 YP_002363924.1 CDS Msil_3678 NC_011666.1 4038501 4041020 D PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bid:Bind_3281 protein of unknown function DUF404; hypothetical protein 4038501..4041020 Methylocella silvestris BL2 7093032 YP_002363925.1 CDS Msil_3679 NC_011666.1 4041017 4041916 D PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: bid:Bind_3280 transglutaminase domain protein; transglutaminase domain-containing protein 4041017..4041916 Methylocella silvestris BL2 7093033 YP_002363926.1 CDS Msil_3680 NC_011666.1 4041944 4042237 R PFAM: GYD family protein; KEGG: met:M446_6926 GYD family protein; GYD family protein complement(4041944..4042237) Methylocella silvestris BL2 7093034 YP_002363927.1 CDS Msil_3681 NC_011666.1 4042471 4043163 D PFAM: Glutathione S-transferase domain; KEGG: bid:Bind_3313 glutathione S-transferase domain; glutathione S-transferase domain-containing protein 4042471..4043163 Methylocella silvestris BL2 7093035 YP_002363928.1 CDS Msil_3682 NC_011666.1 4043220 4044320 D TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: bid:Bind_3314 iron-sulfur cluster binding protein; iron-sulfur cluster binding protein 4043220..4044320 Methylocella silvestris BL2 7093036 YP_002363929.1 CDS Msil_3683 NC_011666.1 4044317 4045192 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: bid:Bind_3315 3-beta hydroxysteroid dehydrogenase/isomerase; NAD-dependent epimerase/dehydratase 4044317..4045192 Methylocella silvestris BL2 7093037 YP_002363930.1 CDS Msil_3684 NC_011666.1 4045144 4046091 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rru:Rru_A2875 LysR family transcriptional regulator; LysR family transcriptional regulator complement(4045144..4046091) Methylocella silvestris BL2 7093038 YP_002363931.1 CDS Msil_3685 NC_011666.1 4046193 4047188 D PFAM: aldo/keto reductase; KEGG: rru:Rru_A2876 aldo/keto reductase; aldo/keto reductase 4046193..4047188 Methylocella silvestris BL2 7093039 YP_002363932.1 CDS Msil_3686 NC_011666.1 4047192 4049321 R PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; Phytochrome central region domain protein; PAS fold-2 domain protein; KEGG: xau:Xaut_2444 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase complement(4047192..4049321) Methylocella silvestris BL2 7093040 YP_002363933.1 CDS Msil_3687 NC_011666.1 4049605 4051674 D PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: bid:Bind_3258 peptidyl-dipeptidase DCP; peptidyl-dipeptidase Dcp 4049605..4051674 Methylocella silvestris BL2 7093041 YP_002363934.1 CDS Msil_3688 NC_011666.1 4051747 4052382 R PFAM: DSBA oxidoreductase; KEGG: met:M446_0134 DsbA oxidoreductase; DSBA oxidoreductase complement(4051747..4052382) Methylocella silvestris BL2 7093042 YP_002363935.1 CDS Msil_3689 NC_011666.1 4052439 4052939 R PFAM: protein of unknown function DUF1178; KEGG: xau:Xaut_3087 hypothetical protein; hypothetical protein complement(4052439..4052939) Methylocella silvestris BL2 7093043 YP_002363936.1 CDS Msil_3690 NC_011666.1 4052936 4053199 R TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: bid:Bind_3310 glutaredoxin 3; glutaredoxin 3 complement(4052936..4053199) Methylocella silvestris BL2 7093044 YP_002363937.1 CDS Msil_3691 NC_011666.1 4053323 4053799 D PFAM: ferric-uptake regulator; KEGG: met:M446_2230 ferric uptake regulator, Fur family; Fur family ferric uptake regulator 4053323..4053799 Methylocella silvestris BL2 7093045 YP_002363938.1 CDS Msil_3692 NC_011666.1 4053815 4054861 D PFAM: ferrochelatase; KEGG: mex:Mext_1470 ferrochelatase; ferrochelatase 4053815..4054861 Methylocella silvestris BL2 7093046 YP_002363939.1 CDS Msil_3693 NC_011666.1 4054858 4055673 R KEGG: bbt:BBta_3397 hypothetical protein; hypothetical protein complement(4054858..4055673) Methylocella silvestris BL2 7093047 YP_002363940.1 CDS Msil_3694 NC_011666.1 4055670 4056509 R PFAM: protein of unknown function DUF692; KEGG: bbt:BBta_3398 hypothetical protein; hypothetical protein complement(4055670..4056509) Methylocella silvestris BL2 7093048 YP_002363941.1 CDS Msil_3695 NC_011666.1 4056596 4056880 R KEGG: mpt:Mpe_A2832 hypothetical protein; hypothetical protein complement(4056596..4056880) Methylocella silvestris BL2 7093049 YP_002363942.1 CDS Msil_3696 NC_011666.1 4056997 4057986 R TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bid:Bind_1866 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(4056997..4057986) Methylocella silvestris BL2 7093050 YP_002363943.1 CDS Msil_3697 NC_011666.1 4058282 4059169 D KEGG: bid:Bind_0435 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase 4058282..4059169 Methylocella silvestris BL2 7093051 YP_002363944.1 CDS Msil_3698 NC_011666.1 4059209 4060303 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bja:bll2445 oxidoreductase; NADH:flavin oxidoreductase complement(4059209..4060303) Methylocella silvestris BL2 7093052 YP_002363945.1 CDS Msil_3699 NC_011666.1 4060414 4060668 R KEGG: bid:Bind_3227 hypothetical protein; hypothetical protein complement(4060414..4060668) Methylocella silvestris BL2 7093053 YP_002363946.1 CDS Msil_3700 NC_011666.1 4060786 4061610 R PFAM: N-formylglutamate amidohydrolase; KEGG: bid:Bind_3232 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase complement(4060786..4061610) Methylocella silvestris BL2 7093054 YP_002363947.1 CDS Msil_3701 NC_011666.1 4061879 4062310 D PFAM: protein of unknown function DUF1036; KEGG: bid:Bind_3233 protein of unknown function DUF1036; hypothetical protein 4061879..4062310 Methylocella silvestris BL2 7093055 YP_002363948.1 CDS Msil_3702 NC_011666.1 4062332 4063825 D KEGG: bid:Bind_1864 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 4062332..4063825 Methylocella silvestris BL2 7093056 YP_002363949.1 CDS Msil_3703 NC_011666.1 4063835 4065973 R KEGG: bid:Bind_3046 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein complement(4063835..4065973) Methylocella silvestris BL2 7093057 YP_002363950.1 CDS Msil_3704 NC_011666.1 4066100 4067128 R KEGG: nfa:nfa20300 hypothetical protein; hypothetical protein complement(4066100..4067128) Methylocella silvestris BL2 7093058 YP_002363951.1 CDS Msil_3705 NC_011666.1 4067347 4068465 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 4067347..4068465 Methylocella silvestris BL2 7093059 YP_002363952.1 CDS Msil_3706 NC_011666.1 4069114 4069833 D hypothetical protein 4069114..4069833 Methylocella silvestris BL2 7093060 YP_002363953.1 CDS Msil_3708 NC_011666.1 4070600 4070989 R PFAM: PilT protein domain protein; KEGG: ret:RHE_CH01644 hypothetical protein; PilT protein domain-containing protein complement(4070600..4070989) Methylocella silvestris BL2 7093062 YP_002363954.1 CDS Msil_3709 NC_011666.1 4070986 4071198 R KEGG: atc:AGR_C_1846 hypothetical protein; hypothetical protein complement(4070986..4071198) Methylocella silvestris BL2 7093063 YP_002363955.1 CDS Msil_3710 NC_011666.1 4071351 4071920 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 4071351..4071920 Methylocella silvestris BL2 7093064 YP_002363956.1 CDS Msil_3711 NC_011666.1 4071917 4072708 D PFAM: inositol monophosphatase; KEGG: bid:Bind_3216 inositol-phosphate phosphatase; inositol-phosphate phosphatase 4071917..4072708 Methylocella silvestris BL2 7093065 YP_002363957.1 CDS Msil_3712 NC_011666.1 4073052 4073480 D KEGG: bid:Bind_3311 hypothetical protein; hypothetical protein 4073052..4073480 Methylocella silvestris BL2 7093066 YP_002363958.1 CDS Msil_3713 NC_011666.1 4073531 4073953 R PFAM: Class I peptide chain release factor; KEGG: bid:Bind_0245 class I peptide chain release factor; class I peptide chain release factor complement(4073531..4073953) Methylocella silvestris BL2 7093067 YP_002363959.1 CDS Msil_3714 NC_011666.1 4074059 4075084 D PFAM: Extensin family protein; KEGG: bid:Bind_3312 extensin family protein; extensin family protein 4074059..4075084 Methylocella silvestris BL2 7093068 YP_002363960.1 CDS Msil_3715 NC_011666.1 4075190 4076056 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: acr:Acry_1099 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(4075190..4076056) Methylocella silvestris BL2 7093069 YP_002363961.1 CDS Msil_3716 NC_011666.1 4076159 4077190 D PFAM: Bile acid:sodium symporter; KEGG: acr:Acry_1098 bile acid:sodium symporter; bile acid:sodium symporter 4076159..4077190 Methylocella silvestris BL2 7093070 YP_002363962.1 CDS Msil_3717 NC_011666.1 4077202 4077489 R KEGG: oan:Oant_4293 hypothetical protein; hypothetical protein complement(4077202..4077489) Methylocella silvestris BL2 7093071 YP_002363963.1 CDS Msil_3718 NC_011666.1 4077582 4077827 D KEGG: mex:Mext_2588 hypothetical protein; hypothetical protein 4077582..4077827 Methylocella silvestris BL2 7093072 YP_002363964.1 CDS ligC NC_011666.1 4077835 4078860 D catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth; ATP-dependent DNA ligase 4077835..4078860 Methylocella silvestris BL2 7093073 YP_002363965.1 CDS Msil_3720 NC_011666.1 4078867 4079592 R PFAM: MOSC domain containing protein; KEGG: rsp:RSP_1921 MOSC domain-containing protein; MOSC domain-containing protein complement(4078867..4079592) Methylocella silvestris BL2 7093074 YP_002363966.1 CDS Msil_3721 NC_011666.1 4079609 4080199 R PFAM: regulatory protein TetR; KEGG: bid:Bind_2558 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(4079609..4080199) Methylocella silvestris BL2 7093075 YP_002363967.1 CDS Msil_3722 NC_011666.1 4080438 4080968 R PFAM: flavin reductase domain protein FMN-binding; KEGG: bxe:Bxe_A1916 putative flavin reductase-like protein; flavin reductase domain-containing protein complement(4080438..4080968) Methylocella silvestris BL2 7093076 YP_002363968.1 CDS Msil_3723 NC_011666.1 4081139 4083793 R PFAM: Erythromycin esterase; KEGG: cak:Caul_4233 erythromycin esterase; erythromycin esterase complement(4081139..4083793) Methylocella silvestris BL2 7093077 YP_002363969.1 CDS Msil_3725 NC_011666.1 4084189 4085118 D catalyzes the formation of glutamate from glutamine; glutaminase 4084189..4085118 Methylocella silvestris BL2 7093079 YP_002363970.1 CDS Msil_3726 NC_011666.1 4085291 4085401 R hypothetical protein complement(4085291..4085401) Methylocella silvestris BL2 7093080 YP_002363971.1 CDS Msil_3727 NC_011666.1 4085555 4087516 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: azc:AZC_1911 transcriptional regulator; Fis family GAF modulated sigma54 specific transcriptional regulator 4085555..4087516 Methylocella silvestris BL2 7093081 YP_002363972.1 CDS Msil_3728 NC_011666.1 4087837 4088913 D PFAM: ATP-NAD/AcoX kinase; KEGG: azc:AZC_1910 ATP-NAD/AcoX kinase; ATP-NAD/AcoX kinase 4087837..4088913 Methylocella silvestris BL2 7093082 YP_002363973.1 CDS Msil_3729 NC_011666.1 4088931 4089914 D PFAM: dehydrogenase E1 component; KEGG: azc:AZC_1909 acetoin dehydrogenase complex E1 component alpha subunit; pyruvate dehydrogenase 4088931..4089914 Methylocella silvestris BL2 7093083 YP_002363974.1 CDS Msil_3730 NC_011666.1 4089935 4090957 D PFAM: Transketolase central region; Transketolase domain protein; KEGG: xau:Xaut_4044 transketolase central region; transketolase 4089935..4090957 Methylocella silvestris BL2 7093084 YP_002363975.1 CDS Msil_3731 NC_011666.1 4090970 4092088 D PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment domain-containing protein; KEGG: xau:Xaut_4043 branched-chain alpha-keto acid dehydrogenase subunit E2; branched-chain alpha-keto acid dehydrogenase subunit E2 4090970..4092088 Methylocella silvestris BL2 7093085 YP_002363976.1 CDS Msil_3732 NC_011666.1 4092481 4093404 D KEGG: azo:azo3866 conserved hypothetical secreted protein; hypothetical protein 4092481..4093404 Methylocella silvestris BL2 7093086 YP_002363977.1 CDS Msil_3733 NC_011666.1 4093454 4095142 D PFAM: Pyrrolo-quinoline quinone; KEGG: azo:azo3865 putative quinoprotein ethanol dehydrogenase; Pyrrolo-quinoline quinone 4093454..4095142 Methylocella silvestris BL2 7093087 YP_002363978.1 CDS Msil_3734 NC_011666.1 4095307 4095705 D KEGG: lch:Lcho_0850 hypothetical protein; hypothetical protein 4095307..4095705 Methylocella silvestris BL2 7093088 YP_002363979.1 CDS Msil_3735 NC_011666.1 4095662 4096495 D PFAM: extracellular solute-binding protein family 3; KEGG: bra:BRADO0121 hypothetical protein; family 3 extracellular solute-binding protein 4095662..4096495 Methylocella silvestris BL2 7093089 YP_002363980.1 CDS Msil_3736 NC_011666.1 4096634 4097473 D KEGG: xau:Xaut_4178 hypothetical protein; hypothetical protein 4096634..4097473 Methylocella silvestris BL2 7093090 YP_002363981.1 CDS Msil_3737 NC_011666.1 4097470 4098063 D PFAM: Chromate transporter; KEGG: xau:Xaut_4177 chromate transporter; chromate transporter 4097470..4098063 Methylocella silvestris BL2 7093091 YP_002363982.1 CDS Msil_3738 NC_011666.1 4098071 4098598 D PFAM: Chromate transporter; KEGG: xau:Xaut_4176 chromate transporter; chromate transporter 4098071..4098598 Methylocella silvestris BL2 7093092 YP_002363983.1 CDS Msil_3739 NC_011666.1 4098605 4099177 R PFAM: GTP cyclohydrolase I; KEGG: pzu:PHZ_c3118 GTP cyclohydrolase I; GTP cyclohydrolase I complement(4098605..4099177) Methylocella silvestris BL2 7093093 YP_002363984.1 CDS Msil_3740 NC_011666.1 4099452 4099949 D KEGG: bid:Bind_0252 hypothetical protein; hypothetical protein 4099452..4099949 Methylocella silvestris BL2 7093094 YP_002363985.1 CDS Msil_3741 NC_011666.1 4100871 4101254 D PFAM: response regulator receiver; KEGG: rpd:RPD_3796 response regulator receiver; response regulator receiver protein 4100871..4101254 Methylocella silvestris BL2 7093095 YP_002363986.1 CDS Msil_3742 NC_011666.1 4101259 4101969 R PFAM: cyclic nucleotide-binding; KEGG: bra:BRADO7007 CRP/FNR family transcriptional regulator; cyclic nucleotide-binding protein complement(4101259..4101969) Methylocella silvestris BL2 7093096 YP_002363987.1 CDS Msil_3743 NC_011666.1 4102516 4102824 R hypothetical protein complement(4102516..4102824) Methylocella silvestris BL2 7093097 YP_002363988.1 CDS Msil_3744 NC_011666.1 4103087 4103830 D PFAM: cyclic nucleotide-binding; KEGG: bra:BRADO7007 CRP/FNR family transcriptional regulator; cyclic nucleotide-binding protein 4103087..4103830 Methylocella silvestris BL2 7093098 YP_002363989.1 CDS Msil_3745 NC_011666.1 4104359 4104964 D PFAM: regulatory protein TetR; KEGG: bbt:BBta_2216 TetR family transcriptional regulator; TetR family transcriptional regulator 4104359..4104964 Methylocella silvestris BL2 7093099 YP_002363990.1 CDS Msil_3746 NC_011666.1 4104961 4105152 R KEGG: azc:AZC_1459 hypothetical protein; hypothetical protein complement(4104961..4105152) Methylocella silvestris BL2 7093100 YP_002363991.1 CDS Msil_3747 NC_011666.1 4105348 4105947 R PFAM: HupE/UreJ protein; KEGG: bbt:BBta_0479 hydrogenase/urease accessory protein; HupE/UreJ protein complement(4105348..4105947) Methylocella silvestris BL2 7093101 YP_002363992.1 CDS Msil_3748 NC_011666.1 4106010 4106969 R TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: bbt:BBta_0478 hydrogenase nickel incorporation; hydrogenase nickel incorporation protein HypB complement(4106010..4106969) Methylocella silvestris BL2 7093102 YP_002363993.1 CDS Msil_3749 NC_011666.1 4106969 4107307 R PFAM: hydrogenase expression/synthesis HypA; KEGG: bbt:BBta_0476 hydrogenase formation/expression; hydrogenase nickel incorporation protein HypA complement(4106969..4107307) Methylocella silvestris BL2 7093103 YP_002363994.1 CDS Msil_3750 NC_011666.1 4107326 4108393 R TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: bbt:BBta_0475 hydrogenase maturation; hydrogenase expression/formation protein HypE complement(4107326..4108393) Methylocella silvestris BL2 7093104 YP_002363995.1 CDS Msil_3751 NC_011666.1 4108390 4109547 R TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: bbt:BBta_0474 hydrogenase expression/formation; hydrogenase expression/formation protein HypD complement(4108390..4109547) Methylocella silvestris BL2 7093105 YP_002363996.1 CDS Msil_3752 NC_011666.1 4109613 4109894 R TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: ter:Tery_0794 hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF complement(4109613..4109894) Methylocella silvestris BL2 7093106 YP_002363997.1 CDS Msil_3753 NC_011666.1 4109898 4112327 R TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: bbt:BBta_0471 carbamoyl phosphate phosphatase, (NiFe) hydrogenase maturation protein; (NiFe) hydrogenase maturation protein HypF complement(4109898..4112327) Methylocella silvestris BL2 7093107 YP_002363998.1 CDS Msil_3754 NC_011666.1 4112324 4113520 R PFAM: NHL repeat containing protein; KEGG: bbt:BBta_0470 hypothetical protein; NHL repeat containing protein complement(4112324..4113520) Methylocella silvestris BL2 7093108 YP_002363999.1 CDS Msil_3755 NC_011666.1 4113517 4114389 R PFAM: nitrogen-fixing NifU domain protein; Rieske [2Fe-2S] domain protein; KEGG: bbt:BBta_0469 putative nitrogen-fixing NifU, Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein complement(4113517..4114389) Methylocella silvestris BL2 7093109 YP_002364000.1 CDS Msil_3756 NC_011666.1 4114391 4114615 R KEGG: bbt:BBta_0468 hypothetical protein; hypothetical protein complement(4114391..4114615) Methylocella silvestris BL2 7093110 YP_002364001.1 CDS Msil_3757 NC_011666.1 4114624 4114836 R KEGG: bbt:BBta_0467 hypothetical protein; hypothetical protein complement(4114624..4114836) Methylocella silvestris BL2 7093111 YP_002364002.1 CDS Msil_3758 NC_011666.1 4114886 4115899 R KEGG: bbt:BBta_0466 hypothetical protein; hypothetical protein complement(4114886..4115899) Methylocella silvestris BL2 7090686 YP_002364003.1 CDS Msil_3759 NC_011666.1 4116001 4116321 R KEGG: sal:Sala_3202 hypothetical protein; hypothetical protein complement(4116001..4116321) Methylocella silvestris BL2 7090687 YP_002364004.1 CDS Msil_3760 NC_011666.1 4116318 4116794 R TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: npu:Npun_F0374 hydrogenase maturation protease; hydrogenase maturation protease complement(4116318..4116794) Methylocella silvestris BL2 7090688 YP_002364005.1 CDS Msil_3761 NC_011666.1 4116805 4117128 R KEGG: bbt:BBta_0463 hypothetical protein; hypothetical protein complement(4116805..4117128) Methylocella silvestris BL2 7090689 YP_002364006.1 CDS Msil_3762 NC_011666.1 4117168 4117482 R KEGG: bbt:BBta_0462 hypothetical protein; hypothetical protein complement(4117168..4117482) Methylocella silvestris BL2 7090690 YP_002364007.1 CDS Msil_3763 NC_011666.1 4117572 4119170 R PFAM: nickel-dependent hydrogenase large subunit; KEGG: bbt:BBta_0461 uptake hydrogenase large subunit; nickel-dependent hydrogenase large subunit complement(4117572..4119170) Methylocella silvestris BL2 7090691 YP_002364008.1 CDS Msil_3764 NC_011666.1 4119231 4120193 R PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: bbt:BBta_0460 uptake hydrogenase accessory protein HupU; NADH ubiquinone oxidoreductase 20 kDa subunit complement(4119231..4120193) Methylocella silvestris BL2 7090692 YP_002364009.1 CDS Msil_3765 NC_011666.1 4120420 4120662 R KEGG: sal:Sala_3196 hypothetical protein; hypothetical protein complement(4120420..4120662) Methylocella silvestris BL2 7090693 YP_002364010.1 CDS Msil_3766 NC_011666.1 4120672 4122117 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bbt:BBta_0458 two-component response regulator protein; Fis family two component sigma-54 specific transcriptional regulator complement(4120672..4122117) Methylocella silvestris BL2 7090694 YP_002364011.1 CDS Msil_3767 NC_011666.1 4122186 4124528 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; Hemerythrin HHE cation binding domain protein; KEGG: bbt:BBta_1328 putative cation-transporting ATPase; heavy metal translocating P-type ATPase complement(4122186..4124528) Methylocella silvestris BL2 7090695 YP_002364012.1 CDS Msil_3768 NC_011666.1 4124725 4125312 D PFAM: response regulator receiver; ANTAR domain protein; KEGG: bid:Bind_1968 response regulator receiver and ANTAR domain protein; response regulator receiver and ANTAR domain-containing protein 4124725..4125312 Methylocella silvestris BL2 7090696 YP_002364013.1 CDS Msil_3769 NC_011666.1 4125340 4126563 D KEGG: mca:MCA0589 nitrate transporter, putative; nitrate transporter 4125340..4126563 Methylocella silvestris BL2 7090697 YP_002364014.1 CDS Msil_3770 NC_011666.1 4126835 4127737 D TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: swi:Swit_1710 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 4126835..4127737 Methylocella silvestris BL2 7090698 YP_002364015.1 CDS Msil_3771 NC_011666.1 4127847 4129061 D PFAM: major facilitator superfamily MFS_1; KEGG: azo:azo1288 putative nitrate transporter; major facilitator superfamily protein 4127847..4129061 Methylocella silvestris BL2 7090699 YP_002364016.1 CDS Msil_3772 NC_011666.1 4129067 4131193 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: fra:Francci3_0863 assimilatory nitrate reductase (NADH) alpha subunit apoprotein; molybdopterin oxidoreductase 4129067..4131193 Methylocella silvestris BL2 7090700 YP_002364017.1 CDS Msil_3773 NC_011666.1 4131205 4131555 D KEGG: scl:sce3487 hypothetical protein; hypothetical protein 4131205..4131555 Methylocella silvestris BL2 7090701 YP_002364018.1 CDS Msil_3774 NC_011666.1 4131586 4134027 D TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: scl:sce3488 nitrite reductase; nitrite reductase (NAD(P)H) large subunit 4131586..4134027 Methylocella silvestris BL2 7090702 YP_002364019.1 CDS Msil_3775 NC_011666.1 4134029 4134352 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: scl:sce3489 nitrite reductase small subunit, probable; Rieske (2Fe-2S) domain-containing protein 4134029..4134352 Methylocella silvestris BL2 7090703 YP_002364020.1 CDS Msil_3776 NC_011666.1 4134390 4135133 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI2672 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR complement(4134390..4135133) Methylocella silvestris BL2 7090704 YP_002364021.1 CDS Msil_3777 NC_011666.1 4135326 4136441 D PFAM: FAD dependent oxidoreductase; KEGG: rpt:Rpal_4647 FAD dependent oxidoreductase; FAD dependent oxidoreductase 4135326..4136441 Methylocella silvestris BL2 7090705 YP_002364022.1 CDS Msil_3778 NC_011666.1 4136785 4137153 D PFAM: ferredoxin; KEGG: xau:Xaut_0287 ferredoxin; ferredoxin 4136785..4137153 Methylocella silvestris BL2 7090706 YP_002364023.1 CDS Msil_3779 NC_011666.1 4137233 4137724 D KEGG: xau:Xaut_0286 rubrerythrin; rubrerythrin 4137233..4137724 Methylocella silvestris BL2 7090707 YP_002364024.1 CDS Msil_3780 NC_011666.1 4137748 4138683 R PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: bid:Bind_1751 electron transfer flavoprotein alpha subunit; electron transfer flavoprotein subunit alpha complement(4137748..4138683) Methylocella silvestris BL2 7090708 YP_002364025.1 CDS Msil_3781 NC_011666.1 4138685 4139434 R PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bid:Bind_1752 electron transfer flavoprotein alpha/beta-subunit; electron transfer flavoprotein subunit alpha/beta complement(4138685..4139434) Methylocella silvestris BL2 7090709 YP_002364026.1 CDS Msil_3782 NC_011666.1 4139624 4140301 R PFAM: regulatory protein TetR; KEGG: pla:Plav_0444 TetR family transcriptional regulator; TetR family transcriptional regulator complement(4139624..4140301) Methylocella silvestris BL2 7090710 YP_002364027.1 CDS Msil_3783 NC_011666.1 4140546 4140941 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bid:Bind_3204 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 4140546..4140941 Methylocella silvestris BL2 7090711 YP_002364028.1 CDS Msil_3784 NC_011666.1 4141124 4143334 R KEGG: azc:AZC_1772 methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; methylmalonyl-CoA mutase large subunit complement(4141124..4143334) Methylocella silvestris BL2 7090712 YP_002364029.1 CDS Msil_3785 NC_011666.1 4143334 4145199 R PFAM: methylmalonyl-CoA mutase; KEGG: met:M446_0217 methylmalonyl-CoA mutase; methylmalonyl-CoA mutase complement(4143334..4145199) Methylocella silvestris BL2 7090713 YP_002364030.1 CDS Msil_3786 NC_011666.1 4145196 4147202 R PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: mrd:Mrad2831_2750 carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthase L chain ATP-binding complement(4145196..4147202) Methylocella silvestris BL2 7090714 YP_002364031.1 CDS Msil_3787 NC_011666.1 4147210 4148742 R PFAM: carboxyl transferase; KEGG: azc:AZC_1775 propionyl-CoA carboxylase; propionyl-CoA carboxylase complement(4147210..4148742) Methylocella silvestris BL2 7090715 YP_002364032.1 CDS Msil_3788 NC_011666.1 4148968 4150401 D PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: bid:Bind_3598 transcriptional regulator, XRE family; XRE family transcriptional regulator 4148968..4150401 Methylocella silvestris BL2 7090716 YP_002364033.1 CDS Msil_3789 NC_011666.1 4150430 4151602 R PFAM: ABC-2 type transporter; KEGG: bid:Bind_1742 ABC-2 type transporter; ABC-2 type transporter complement(4150430..4151602) Methylocella silvestris BL2 7090717 YP_002364034.1 CDS Msil_3790 NC_011666.1 4151604 4154342 R PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: mex:Mext_0565 ABC transporter related; ABC transporter-like protein complement(4151604..4154342) Methylocella silvestris BL2 7090718 YP_002364035.1 CDS Msil_3791 NC_011666.1 4154339 4155385 R PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_0564 secretion protein HlyD family protein; secretion protein HlyD family protein complement(4154339..4155385) Methylocella silvestris BL2 7090719 YP_002364036.1 CDS Msil_3792 NC_011666.1 4155710 4156282 D PFAM: NnrUfamily protein; KEGG: rpa:RPA3099 NnrU family protein; NnrU family protein 4155710..4156282 Methylocella silvestris BL2 7090720 YP_002364037.1 CDS Msil_3793 NC_011666.1 4156387 4158540 D KEGG: gbe:GbCGDNIH1_0916 isoamylase; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX 4156387..4158540 Methylocella silvestris BL2 7090721 YP_002364038.1 CDS Msil_3794 NC_011666.1 4158555 4159439 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_4335 LysR family transcriptional regulator; LysR family transcriptional regulator complement(4158555..4159439) Methylocella silvestris BL2 7090722 YP_002364039.1 CDS Msil_3795 NC_011666.1 4159534 4159941 D PFAM: LrgA family protein; KEGG: oan:Oant_0421 LrgA family protein; LrgA family protein 4159534..4159941 Methylocella silvestris BL2 7090723 YP_002364040.1 CDS Msil_3796 NC_011666.1 4159928 4160650 D PFAM: LrgB family protein; KEGG: oan:Oant_0422 LrgB family protein; LrgB family protein 4159928..4160650 Methylocella silvestris BL2 7090724 YP_002364041.1 CDS Msil_3797 NC_011666.1 4160661 4161047 R PFAM: protein of unknown function DUF952; KEGG: mrd:Mrad2831_0548 protein of unknown function DUF952; hypothetical protein complement(4160661..4161047) Methylocella silvestris BL2 7090725 YP_002364042.1 CDS lysK NC_011666.1 4161051 4162808 R class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; lysyl-tRNA synthetase complement(4161051..4162808) Methylocella silvestris BL2 7090726 YP_002364043.1 CDS Msil_3799 NC_011666.1 4162990 4163883 R PFAM: cytochrome c1; KEGG: bid:Bind_0156 cytochrome c1; cytochrome c1 complement(4162990..4163883) Methylocella silvestris BL2 7090727 YP_002364044.1 CDS Msil_3800 NC_011666.1 4163921 4165174 R PFAM: Cytochrome b/b6 domain; KEGG: bid:Bind_0155 cytochrome b/b6 domain; cytochrome b/b6 protein complement(4163921..4165174) Methylocella silvestris BL2 7090728 YP_002364045.1 CDS Msil_3801 NC_011666.1 4165289 4165810 R TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; Ubiquinol-cytochrome c reductase iron-sulfur subunit; KEGG: bid:Bind_0154 ubiquinol-cytochrome c reductase, iron-sulfur subunit; ubiquinol-cytochrome c reductase, iron-sulfur subunit complement(4165289..4165810) Methylocella silvestris BL2 7090729 YP_002364046.1 CDS Msil_3802 NC_011666.1 4166005 4166514 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bid:Bind_0153 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 4166005..4166514 Methylocella silvestris BL2 7090730 YP_002364047.1 CDS Msil_3803 NC_011666.1 4166560 4167222 D hypothetical protein 4166560..4167222 Methylocella silvestris BL2 7090731 YP_002364048.1 CDS Msil_3804 NC_011666.1 4167520 4168416 D catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 4167520..4168416 Methylocella silvestris BL2 7090732 YP_002364049.1 CDS Msil_3805 NC_011666.1 4168608 4168874 D KEGG: xau:Xaut_2953 hypothetical protein; hypothetical protein 4168608..4168874 Methylocella silvestris BL2 7090733 YP_002364050.1 CDS Msil_3806 NC_011666.1 4168881 4169582 R PFAM: 4'-phosphopantetheinyl transferase; KEGG: mar:MAE_07060 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase complement(4168881..4169582) Methylocella silvestris BL2 7090734 YP_002364051.1 CDS Msil_3807 NC_011666.1 4169671 4170795 D PFAM: dihydroorotate dehydrogenase; KEGG: rpb:RPB_4622 dihydroorotate dehydrogenase 2; dihydroorotate dehydrogenase 4169671..4170795 Methylocella silvestris BL2 7090735 YP_002364052.1 CDS Msil_3808 NC_011666.1 4170808 4171164 R KEGG: bid:Bind_1070 hypothetical protein; hypothetical protein complement(4170808..4171164) Methylocella silvestris BL2 7090736 YP_002364053.1 CDS Msil_3809 NC_011666.1 4171389 4172009 D catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 4171389..4172009 Methylocella silvestris BL2 7090737 YP_002364054.1 CDS Msil_3810 NC_011666.1 4172018 4172668 D PFAM: 2OG-Fe(II) oxygenase; KEGG: azc:AZC_4284 alkylated DNA repair protein; 2OG-Fe(II) oxygenase 4172018..4172668 Methylocella silvestris BL2 7090738 YP_002364055.1 CDS Msil_3811 NC_011666.1 4172712 4173551 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bid:Bind_3461 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 4172712..4173551 Methylocella silvestris BL2 7090739 YP_002364056.1 CDS Msil_3812 NC_011666.1 4173556 4175142 D PFAM: extracellular solute-binding protein family 5; KEGG: bid:Bind_3462 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 4173556..4175142 Methylocella silvestris BL2 7090740 YP_002364057.1 CDS Msil_3813 NC_011666.1 4175146 4175733 R TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: bid:Bind_0149 ATP--cobalamin adenosyltransferase; ATP/cobalamin adenosyltransferase complement(4175146..4175733) Methylocella silvestris BL2 7090741 YP_002364058.1 CDS Msil_3814 NC_011666.1 4175861 4176049 R KEGG: bid:Bind_0148 hypothetical protein; hypothetical protein complement(4175861..4176049) Methylocella silvestris BL2 7090742 YP_002364059.1 CDS Msil_3815 NC_011666.1 4176163 4178892 R KEGG: bid:Bind_0051 hypothetical protein; hypothetical protein complement(4176163..4178892) Methylocella silvestris BL2 7090743 YP_002364060.1 CDS Msil_3816 NC_011666.1 4179026 4180294 R TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bid:Bind_0050 diaminopimelate decarboxylase; diaminopimelate decarboxylase complement(4179026..4180294) Methylocella silvestris BL2 7090744 YP_002364061.1 CDS Msil_3817 NC_011666.1 4180310 4180585 R KEGG: sth:STH1065 hypothetical protein; hypothetical protein complement(4180310..4180585) Methylocella silvestris BL2 7090745 YP_002364062.1 CDS Msil_3818 NC_011666.1 4180787 4181638 D PFAM: transglutaminase domain protein; KEGG: scl:sce0813 transglutaminase-like enzymes, putative cysteine proteases; transglutaminase domain-containing protein 4180787..4181638 Methylocella silvestris BL2 7090746 YP_002364063.1 CDS Msil_3819 NC_011666.1 4181738 4182220 R PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: bid:Bind_0740 H+transporting two-sector ATPase B/B' subunit; H+transporting two-sector ATPase subunit B/B' complement(4181738..4182220) Methylocella silvestris BL2 7090747 YP_002364064.1 CDS Msil_3820 NC_011666.1 4182237 4182788 R PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: bid:Bind_0741 H+transporting two-sector ATPase B/B' subunit; H+transporting two-sector ATPase subunit B/B' complement(4182237..4182788) Methylocella silvestris BL2 7090748 YP_002364065.1 CDS Msil_3821 NC_011666.1 4182861 4183088 R PFAM: H+transporting two-sector ATPase C subunit; KEGG: bid:Bind_0742 H+transporting two-sector ATPase C subunit; H+transporting two-sector ATPase subunit C complement(4182861..4183088) Methylocella silvestris BL2 7090749 YP_002364066.1 CDS Msil_3822 NC_011666.1 4183141 4183893 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(4183141..4183893) Methylocella silvestris BL2 7090750 YP_002364067.1 CDS Msil_3823 NC_011666.1 4183955 4184389 R KEGG: bid:Bind_0744 hypothetical protein; hypothetical protein complement(4183955..4184389) Methylocella silvestris BL2 7090751 YP_002364068.1 CDS Msil_3824 NC_011666.1 4184606 4188061 R TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: bid:Bind_0745 chromosome segregation protein SMC; chromosome segregation protein SMC complement(4184606..4188061) Methylocella silvestris BL2 7090752 YP_002364069.1 CDS Msil_3825 NC_011666.1 4188254 4188907 R PFAM: DSBA oxidoreductase; KEGG: bid:Bind_2195 DsbA oxidoreductase; DSBA oxidoreductase complement(4188254..4188907) Methylocella silvestris BL2 7090753 YP_002364070.1 CDS Msil_3826 NC_011666.1 4189189 4191021 R PFAM: extracellular solute-binding protein family 5; KEGG: bid:Bind_2194 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein complement(4189189..4191021) Methylocella silvestris BL2 7090754 YP_002364071.1 CDS Msil_3827 NC_011666.1 4191046 4191438 R hypothetical protein complement(4191046..4191438) Methylocella silvestris BL2 7090755 YP_002364072.1 CDS Msil_3828 NC_011666.1 4191508 4192071 D PFAM: Invasion associated locus B family protein; KEGG: bid:Bind_2193 invasion associated locus B family protein; invasion associated locus B family protein 4191508..4192071 Methylocella silvestris BL2 7090756 YP_002364073.1 CDS Msil_3829 NC_011666.1 4192144 4192779 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bid:Bind_0304 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(4192144..4192779) Methylocella silvestris BL2 7090757 YP_002364074.1 CDS Msil_3830 NC_011666.1 4192776 4194266 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: bid:Bind_0302 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(4192776..4194266) Methylocella silvestris BL2 7090758 YP_002364075.1 CDS Msil_3831 NC_011666.1 4194470 4195228 D TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: bid:Bind_0301 uridylate kinase; uridylate kinase 4194470..4195228 Methylocella silvestris BL2 7090759 YP_002364076.1 CDS frr NC_011666.1 4195304 4195864 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 4195304..4195864 Methylocella silvestris BL2 7090760 YP_002364077.1 CDS Msil_3833 NC_011666.1 4196066 4196848 D KEGG: bid:Bind_0299 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 4196066..4196848 Methylocella silvestris BL2 7090761 YP_002364078.1 CDS Msil_3834 NC_011666.1 4196880 4197782 D PFAM: phosphatidate cytidylyltransferase; KEGG: bid:Bind_0298 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 4196880..4197782 Methylocella silvestris BL2 7090762 YP_002364079.1 CDS Msil_3835 NC_011666.1 4197935 4199173 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4197935..4199173 Methylocella silvestris BL2 7090763 YP_002364080.1 CDS Msil_3836 NC_011666.1 4199270 4200415 D KEGG: bid:Bind_0296 membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease 4199270..4200415 Methylocella silvestris BL2 7090764 YP_002364081.1 CDS Msil_3837 NC_011666.1 4200762 4203227 D TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: bid:Bind_0295 outer membrane protein assembly complex, YaeT protein; outer membrane protein assembly complex, YaeT protein 4200762..4203227 Methylocella silvestris BL2 7090765 YP_002364082.1 CDS Msil_3838 NC_011666.1 4203506 4204555 D PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD; KEGG: met:M446_0641 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD 4203506..4204555 Methylocella silvestris BL2 7090766 YP_002364083.1 CDS Msil_3839 NC_011666.1 4204712 4205185 D TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: bid:Bind_3489 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 4204712..4205185 Methylocella silvestris BL2 7092327 YP_002364084.1 CDS Msil_3840 NC_011666.1 4205217 4206188 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bid:Bind_3028 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase zinc-binding domain-containing protein 4205217..4206188 Methylocella silvestris BL2 7092328 YP_002364085.1 CDS Msil_3841 NC_011666.1 4206209 4206952 D TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: bid:Bind_3027 DNA repair protein RecO; DNA repair protein RecO 4206209..4206952 Methylocella silvestris BL2 7092620 YP_002364086.1 CDS rpmG NC_011666.1 4206992 4207159 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(4206992..4207159) Methylocella silvestris BL2 7092538 YP_002364087.1 CDS Msil_3843 NC_011666.1 4207266 4208459 R PFAM: major facilitator superfamily MFS_1; KEGG: bid:Bind_3025 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(4207266..4208459) Methylocella silvestris BL2 7092539 YP_002364088.1 CDS Msil_3844 NC_011666.1 4208486 4208977 R PFAM: protein of unknown function DUF983; KEGG: bid:Bind_3024 protein of unknown function DUF983; hypothetical protein complement(4208486..4208977) Methylocella silvestris BL2 7092540 YP_002364089.1 CDS Msil_3845 NC_011666.1 4209077 4209478 R PFAM: protein of unknown function DUF302; KEGG: met:M446_1260 protein of unknown function DUF302; hypothetical protein complement(4209077..4209478) Methylocella silvestris BL2 7092541 YP_002364090.1 CDS Msil_3846 NC_011666.1 4209512 4211875 R KEGG: bid:Bind_3416 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; ribonuclease R complement(4209512..4211875) Methylocella silvestris BL2 7092542 YP_002364091.1 CDS Msil_3847 NC_011666.1 4211872 4214805 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I complement(4211872..4214805) Methylocella silvestris BL2 7092543 YP_002364092.1 CDS pyrB NC_011666.1 4215108 4216058 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 4215108..4216058 Methylocella silvestris BL2 7092544 YP_002364093.1 CDS Msil_3849 NC_011666.1 4216121 4217440 D KEGG: bid:Bind_3419 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; dihydroorotase, multifunctional complex type 4216121..4217440 Methylocella silvestris BL2 7092545 YP_002364094.1 CDS Msil_3850 NC_011666.1 4217473 4217958 D KEGG: mrd:Mrad2831_3333 hypothetical protein; hypothetical protein 4217473..4217958 Methylocella silvestris BL2 7092546 YP_002364095.1 CDS Msil_3851 NC_011666.1 4218003 4218434 R PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: azc:AZC_1920 hypothetical protein; cupin complement(4218003..4218434) Methylocella silvestris BL2 7092547 YP_002364096.1 CDS Msil_3852 NC_011666.1 4218648 4220108 D KEGG: ppg:PputGB1_3291 hypothetical protein; hypothetical protein 4218648..4220108 Methylocella silvestris BL2 7092548 YP_002364097.1 CDS Msil_3853 NC_011666.1 4220248 4221696 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: syp:SYNPCC7002_A1499 GGDEF domain-containing protein; diguanylate cyclase complement(4220248..4221696) Methylocella silvestris BL2 7092549 YP_002364098.1 CDS Msil_3854 NC_011666.1 4222364 4222702 D PFAM: nitrogen regulatory protein P-II; KEGG: hch:HCH_06398 nitrogen regulatory protein PII; nitrogen regulatory protein P-II 4222364..4222702 Methylocella silvestris BL2 7092550 YP_002364099.1 CDS Msil_3855 NC_011666.1 4222746 4224146 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: nha:Nham_0084 ammonium transporter; ammonium transporter 4222746..4224146 Methylocella silvestris BL2 7092551 YP_002364100.1 CDS Msil_3856 NC_011666.1 4224246 4224860 D PFAM: protein of unknown function DUF205; KEGG: rpa:RPA3119 putative glycerol-3-phosphate acyltransferase PlsY; hypothetical protein 4224246..4224860 Methylocella silvestris BL2 7092552 YP_002364101.1 CDS Msil_3857 NC_011666.1 4224857 4226125 D TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: bid:Bind_3421 DNA protecting protein DprA; DNA protecting protein DprA 4224857..4226125 Methylocella silvestris BL2 7092553 YP_002364102.1 CDS Msil_3858 NC_011666.1 4226139 4227497 R TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: bid:Bind_1338 acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase complement(4226139..4227497) Methylocella silvestris BL2 7092554 YP_002364103.1 CDS Msil_3859 NC_011666.1 4227522 4227980 R TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bid:Bind_1339 acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein complement(4227522..4227980) Methylocella silvestris BL2 7092555 YP_002364104.1 CDS Msil_3860 NC_011666.1 4227986 4228432 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(4227986..4228432) Methylocella silvestris BL2 7092556 YP_002364105.1 CDS Msil_3861 NC_011666.1 4228764 4229822 D KEGG: bph:Bphy_1682 transcription factor jumonji JmjC domain protein; transcription factor jumonji JmjC domain-containing protein 4228764..4229822 Methylocella silvestris BL2 7092557 YP_002364106.1 CDS Msil_3862 NC_011666.1 4230100 4230291 D TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: bid:Bind_1341 preprotein translocase, SecE subunit; preprotein translocase subunit SecE 4230100..4230291 Methylocella silvestris BL2 7092558 YP_002364107.1 CDS Msil_3863 NC_011666.1 4230324 4230854 D TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: bid:Bind_1342 NusG antitermination factor; NusG antitermination factor 4230324..4230854 Methylocella silvestris BL2 7092559 YP_002364108.1 CDS rplK NC_011666.1 4231030 4231458 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 4231030..4231458 Methylocella silvestris BL2 7092560 YP_002364109.1 CDS rplA NC_011666.1 4231463 4232158 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 4231463..4232158 Methylocella silvestris BL2 7092561 YP_002364110.1 CDS Msil_3866 NC_011666.1 4232714 4233229 D PFAM: ribosomal protein L10; KEGG: bid:Bind_1345 ribosomal protein L10; 50S ribosomal protein L10 4232714..4233229 Methylocella silvestris BL2 7092562 YP_002364111.1 CDS rplL NC_011666.1 4233283 4233663 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 4233283..4233663 Methylocella silvestris BL2 7092563 YP_002364112.1 CDS rpoB NC_011666.1 4233995 4238125 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 4233995..4238125 Methylocella silvestris BL2 7092564 YP_002364113.1 CDS Msil_3869 NC_011666.1 4238247 4242440 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 4238247..4242440 Methylocella silvestris BL2 7092565 YP_002364114.1 CDS Msil_3870 NC_011666.1 4242655 4243428 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bid:Bind_3056 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 4242655..4243428 Methylocella silvestris BL2 7092566 YP_002364115.1 CDS Msil_3871 NC_011666.1 4243721 4245793 D PFAM: acyltransferase 3; KEGG: xfa:XF0778 O-antigen acetylase; acyltransferase 3 4243721..4245793 Methylocella silvestris BL2 7092567 YP_002364116.1 CDS Msil_3872 NC_011666.1 4245885 4246124 D KEGG: bid:Bind_3056 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 4245885..4246124 Methylocella silvestris BL2 7092568 YP_002364117.1 CDS Msil_3873 NC_011666.1 4246167 4246778 R PFAM: Methyltransferase type 12; KEGG: rru:Rru_A1626 methyltransferase; type 12 methyltransferase complement(4246167..4246778) Methylocella silvestris BL2 7092569 YP_002364118.1 CDS gltD NC_011666.1 4246855 4248273 R glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta complement(4246855..4248273) Methylocella silvestris BL2 7092570 YP_002364119.1 CDS Msil_3875 NC_011666.1 4248429 4253129 R PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bid:Bind_3031 glutamate synthase (ferredoxin); glutamate synthase complement(4248429..4253129) Methylocella silvestris BL2 7092571 YP_002364120.1 CDS Msil_3876 NC_011666.1 4253683 4254735 D PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rpb:RPB_4433 threonine aldolase; threonine aldolase 4253683..4254735 Methylocella silvestris BL2 7092572 YP_002364121.1 CDS Msil_3877 NC_011666.1 4254808 4255287 R PFAM: heat shock protein Hsp20; KEGG: bid:Bind_3020 heat shock protein HSP20; heat shock protein Hsp20 complement(4254808..4255287) Methylocella silvestris BL2 7092573 YP_002364122.1 CDS Msil_3878 NC_011666.1 4255490 4256527 D PFAM: alpha/beta hydrolase fold; KEGG: bid:Bind_3641 lysophospholipase; alpha/beta hydrolase fold protein 4255490..4256527 Methylocella silvestris BL2 7092574 YP_002364123.1 CDS Msil_3879 NC_011666.1 4256608 4257225 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bid:Bind_3056 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(4256608..4257225) Methylocella silvestris BL2 7092575 YP_002364124.1 CDS Msil_3880 NC_011666.1 4257392 4258621 R PFAM: protein of unknown function DUF459; KEGG: bid:Bind_3055 protein of unknown function DUF459; hypothetical protein complement(4257392..4258621) Methylocella silvestris BL2 7092576 YP_002364125.1 CDS Msil_3881 NC_011666.1 4258811 4260334 D PFAM: Aldehyde Dehydrogenase; KEGG: aba:Acid345_1381 aldehyde dehydrogenase (acceptor); aldehyde dehydrogenase 4258811..4260334 Methylocella silvestris BL2 7092577 YP_002364126.1 CDS Msil_3882 NC_011666.1 4260362 4262083 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: met:M446_0616 sulphate transporter; sulfate transporter complement(4260362..4262083) Methylocella silvestris BL2 7092578 YP_002364127.1 CDS Msil_3883 NC_011666.1 4262123 4262407 R PFAM: helix-turn-helix domain protein; KEGG: pde:Pden_2611 putative transcriptional regulator, XRE family; XRE family transcriptional regulator complement(4262123..4262407) Methylocella silvestris BL2 7092579 YP_002364128.1 CDS Msil_3884 NC_011666.1 4262611 4263360 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bpt:Bpet2249 putative oxidoreductase; short-chain dehydrogenase/reductase SDR 4262611..4263360 Methylocella silvestris BL2 7092580 YP_002364129.1 CDS Msil_3886 NC_011666.1 4264440 4264751 R hypothetical protein complement(4264440..4264751) Methylocella silvestris BL2 7092583 YP_002364130.1 CDS Msil_3887 NC_011666.1 4264880 4266097 R KEGG: aor:AO090011000131 hypothetical protein; hypothetical protein complement(4264880..4266097) Methylocella silvestris BL2 7092584 YP_002364131.1 CDS Msil_3888 NC_011666.1 4266609 4267214 D KEGG: xau:Xaut_2116 hypothetical protein; hypothetical protein 4266609..4267214 Methylocella silvestris BL2 7092585 YP_002364132.1 CDS Msil_3889 NC_011666.1 4267186 4267353 D KEGG: gox:GOX0460 hypothetical protein; hypothetical protein 4267186..4267353 Methylocella silvestris BL2 7092586 YP_002364133.1 CDS Msil_3890 NC_011666.1 4267396 4267497 R hypothetical protein complement(4267396..4267497) Methylocella silvestris BL2 7092587 YP_002364134.1 CDS Msil_3891 NC_011666.1 4267505 4268218 R PFAM: heat shock protein DnaJ domain protein; KEGG: noc:Noc_2148 heat shock protein DnaJ-like; heat shock protein DnaJ domain-containing protein complement(4267505..4268218) Methylocella silvestris BL2 7092588 YP_002364135.1 CDS Msil_3892 NC_011666.1 4268408 4270216 D KEGG: tbd:Tbd_0914 hypothetical protein containing twin-arginine translocation pathway signal; hypothetical protein 4268408..4270216 Methylocella silvestris BL2 7092589 YP_002364136.1 CDS Msil_3893 NC_011666.1 4270528 4271748 D PFAM: protein of unknown function DUF214; KEGG: sth:STH855 ABC transporter permease protein; hypothetical protein 4270528..4271748 Methylocella silvestris BL2 7092590 YP_002364137.1 CDS Msil_3894 NC_011666.1 4271752 4272420 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ctc:CTC01821 ABC transporter ATP-binding protein; ABC transporter-like protein 4271752..4272420 Methylocella silvestris BL2 7092591 YP_002364138.1 CDS Msil_3895 NC_011666.1 4272417 4273274 D hypothetical protein 4272417..4273274 Methylocella silvestris BL2 7092592 YP_002364139.1 CDS Msil_3896 NC_011666.1 4273566 4273826 D hypothetical protein 4273566..4273826 Methylocella silvestris BL2 7092593 YP_002364140.1 CDS Msil_3897 NC_011666.1 4273948 4275237 D PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; Glycosyltransferase 28 domain; protein of unknown function DUF1205; KEGG: mrd:Mrad2831_2103 glycosyltransferase 28 domain protein; glycosyl transferase family protein 4273948..4275237 Methylocella silvestris BL2 7092594 YP_002364141.1 CDS Msil_3898 NC_011666.1 4275297 4276544 D PFAM: condensation domain protein; KEGG: bac:BamMC406_6489 condensation domain protein; condensation domain-containing protein 4275297..4276544 Methylocella silvestris BL2 7092595 YP_002364142.1 CDS Msil_3899 NC_011666.1 4276636 4277844 D TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll2691 putative multidrug resistance protein; Bcr/CflA subfamily drug resistance transporter 4276636..4277844 Methylocella silvestris BL2 7092596 YP_002364143.1 CDS Msil_3900 NC_011666.1 4278532 4279311 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bja:blr2694 VirG-like two component response regulator; winged helix family two component transcriptional regulator 4278532..4279311 Methylocella silvestris BL2 7092597 YP_002364144.1 CDS Msil_3901 NC_011666.1 4279455 4279817 D hypothetical protein 4279455..4279817 Methylocella silvestris BL2 7092598 YP_002364145.1 CDS Msil_3902 NC_011666.1 4279798 4279959 D hypothetical protein 4279798..4279959 Methylocella silvestris BL2 7092599 YP_002364146.1 CDS Msil_3903 NC_011666.1 4280149 4281078 D PFAM: Di-haem cytochrome c peroxidase; KEGG: bja:blr2696 cytochrome c peroxidase; cytochrome-c peroxidase 4280149..4281078 Methylocella silvestris BL2 7092600 YP_002364147.1 CDS Msil_3904 NC_011666.1 4281075 4283564 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bja:blr2697 VirA-like protein; two-component VirA-like sensor kinase 4281075..4283564 Methylocella silvestris BL2 7092601 YP_002364148.1 CDS Msil_3905 NC_011666.1 4283694 4284425 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bja:blr2694 VirG-like two component response regulator; winged helix family two component transcriptional regulator complement(4283694..4284425) Methylocella silvestris BL2 7092602 YP_002364149.1 CDS Msil_3906 NC_011666.1 4284848 4286197 D PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; protein of unknown function DUF1205; KEGG: bja:bll2692 putative glycosyltransferase; UDP-glucuronosyl/UDP-glucosyltransferase 4284848..4286197 Methylocella silvestris BL2 7092603 YP_002364150.1 CDS Msil_3907 NC_011666.1 4286318 4286752 R PFAM: protein of unknown function DUF1236; KEGG: rpe:RPE_0234 protein of unknown function DUF1236; hypothetical protein complement(4286318..4286752) Methylocella silvestris BL2 7092604 YP_002364151.1 CDS Msil_3908 NC_011666.1 4287204 4288109 D PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: bbt:BBta_7804 putative heat shock protein-DnaJ-like protein; chaperone DnaJ domain-containing protein 4287204..4288109 Methylocella silvestris BL2 7092605 YP_002364152.1 CDS Msil_3909 NC_011666.1 4288127 4288411 D KEGG: rle:pRL90199 hypothetical protein; hypothetical protein 4288127..4288411 Methylocella silvestris BL2 7092606 YP_002364153.1 CDS Msil_3910 NC_011666.1 4288433 4288831 D PFAM: response regulator receiver; KEGG: rpe:RPE_3629 response regulator receiver protein; response regulator receiver protein 4288433..4288831 Methylocella silvestris BL2 7092607 YP_002364154.1 CDS Msil_3911 NC_011666.1 4288982 4290268 D PFAM: HI0933 family protein; KEGG: rpc:RPC_3087 HI0933-like protein; hypothetical protein 4288982..4290268 Methylocella silvestris BL2 7092608 YP_002364155.1 CDS Msil_3912 NC_011666.1 4290270 4291136 R PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: bid:Bind_3356 prephenate dehydratase; Prephenate dehydratase complement(4290270..4291136) Methylocella silvestris BL2 7092609 YP_002364156.1 CDS Msil_3913 NC_011666.1 4291424 4291972 D PFAM: cytochrome c class I; KEGG: bid:Bind_3357 cytochrome c class I; cytochrome c class I 4291424..4291972 Methylocella silvestris BL2 7092610 YP_002364157.1 CDS Msil_3914 NC_011666.1 4292123 4294015 D PFAM: extracellular solute-binding protein family 5; KEGG: bid:Bind_3358 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 4292123..4294015 Methylocella silvestris BL2 7092611 YP_002364158.1 CDS Msil_3915 NC_011666.1 4294025 4295116 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bid:Bind_3359 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4294025..4295116 Methylocella silvestris BL2 7092612 YP_002364159.1 CDS Msil_3916 NC_011666.1 4295117 4296274 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bid:Bind_3360 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4295117..4296274 Methylocella silvestris BL2 7092613 YP_002364160.1 CDS Msil_3917 NC_011666.1 4296338 4296721 D KEGG: mba:Mbar_A1842 hypothetical protein; hypothetical protein 4296338..4296721 Methylocella silvestris BL2 7092614 YP_002364161.1 CDS Msil_3918 NC_011666.1 4296751 4297386 D hypothetical protein 4296751..4297386 Methylocella silvestris BL2 7092615 YP_002364162.1 CDS Msil_3919 NC_011666.1 4297383 4299014 D PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bid:Bind_3361 ABC transporter related; ABC transporter-like protein 4297383..4299014 Methylocella silvestris BL2 7092616 YP_002364163.1 CDS Msil_3920 NC_011666.1 4299207 4300757 D KEGG: bid:Bind_3013 alpha,alpha-trehalose-phosphate synthase (UDP-forming); TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20; alpha,alpha-trehalose-phosphate synthase 4299207..4300757 Methylocella silvestris BL2 7092617 YP_002364164.1 CDS Msil_3921 NC_011666.1 4301122 4304379 D KEGG: bid:Bind_3014 trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; trehalose synthase 4301122..4304379 Methylocella silvestris BL2 7092618 YP_002364165.1 CDS rpsT NC_011666.1 4304617 4304883 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 4304617..4304883 Methylocella silvestris BL2 7094255 Msil_R0001 tRNA Msil_R0001 NC_011666.1 84230 84303 R tRNA-Cys complement(84230..84303) Methylocella silvestris BL2 7090408 Msil_R0002 tRNA Msil_R0002 NC_011666.1 84568 84643 D tRNA-Asn 84568..84643 Methylocella silvestris BL2 7090409 Msil_R0003 tRNA Msil_R0003 NC_011666.1 148446 148530 D tRNA-Leu 148446..148530 Methylocella silvestris BL2 7090469 Msil_R0004 tRNA Msil_R0004 NC_011666.1 289012 289085 R tRNA-Gln complement(289012..289085) Methylocella silvestris BL2 7090567 Msil_R0006 tRNA Msil_R0006 NC_011666.1 358662 358737 R tRNA-Met complement(358662..358737) Methylocella silvestris BL2 7091539 Msil_R0007 tRNA Msil_R0007 NC_011666.1 397888 397970 D tRNA-Tyr 397888..397970 Methylocella silvestris BL2 7091581 Msil_R0008 tRNA Msil_R0008 NC_011666.1 513445 513534 D tRNA-Ser 513445..513534 Methylocella silvestris BL2 7091194 Msil_R0009 tRNA Msil_R0009 NC_011666.1 543102 543179 D tRNA-Pro 543102..543179 Methylocella silvestris BL2 7091222 Msil_R0010 tRNA Msil_R0010 NC_011666.1 608518 608594 R tRNA-Arg complement(608518..608594) Methylocella silvestris BL2 7091609 Msil_R0011 tRNA Msil_R0011 NC_011666.1 609114 609190 R tRNA-Pro complement(609114..609190) Methylocella silvestris BL2 7091611 Msil_R0012 tRNA Msil_R0012 NC_011666.1 658048 658124 D tRNA-Pro 658048..658124 Methylocella silvestris BL2 7093685 Msil_R0013 tRNA Msil_R0013 NC_011666.1 668040 668115 D tRNA-Ala 668040..668115 Methylocella silvestris BL2 7093696 Msil_R0014 tRNA Msil_R0014 NC_011666.1 689388 689472 R tRNA-Leu complement(689388..689472) Methylocella silvestris BL2 7093715 Msil_R0015 tRNA Msil_R0015 NC_011666.1 744341 744416 D tRNA-Lys 744341..744416 Methylocella silvestris BL2 7092454 Msil_R0016 tRNA Msil_R0016 NC_011666.1 763858 763942 R tRNA-Leu complement(763858..763942) Methylocella silvestris BL2 7091929 Msil_R0017 tRNA Msil_R0017 NC_011666.1 809001 809078 R tRNA-Trp complement(809001..809078) Methylocella silvestris BL2 7091965 Msil_R0018 tRNA Msil_R0018 NC_011666.1 812878 812971 D tRNA-Ser 812878..812971 Methylocella silvestris BL2 7091968 Msil_R0019 tRNA Msil_R0019 NC_011666.1 938277 938352 D tRNA-Phe 938277..938352 Methylocella silvestris BL2 7093284 Msil_R0020 tRNA Msil_R0020 NC_011666.1 974126 974215 R tRNA-Ser complement(974126..974215) Methylocella silvestris BL2 7093321 Msil_R0021 tRNA Msil_R0021 NC_011666.1 993346 993419 R tRNA-Gly complement(993346..993419) Methylocella silvestris BL2 7093341 Msil_R0022 tRNA Msil_R0022 NC_011666.1 1141481 1141556 R tRNA-Lys complement(1141481..1141556) Methylocella silvestris BL2 7091880 Msil_R0023 tRNA Msil_R0023 NC_011666.1 1208535 1208608 D tRNA-Gly 1208535..1208608 Methylocella silvestris BL2 7093883 Msil_R0024 tRNA Msil_R0024 NC_011666.1 1399980 1400055 R tRNA-Thr complement(1399980..1400055) Methylocella silvestris BL2 7091311 Msil_R0025 tRNA Msil_R0025 NC_011666.1 1547887 1547961 D tRNA-Thr 1547887..1547961 Methylocella silvestris BL2 7091771 Msil_R0026 tRNA Msil_R0026 NC_011666.1 1568657 1568733 D tRNA-Met 1568657..1568733 Methylocella silvestris BL2 7091792 Msil_R0027 tRNA Msil_R0027 NC_011666.1 1568891 1568967 D tRNA-Gly 1568891..1568967 Methylocella silvestris BL2 7091793 Msil_R0028 tRNA Msil_R0028 NC_011666.1 1682071 1682146 R tRNA-Thr complement(1682071..1682146) Methylocella silvestris BL2 7092064 Msil_R0031 tRNA Msil_R0031 NC_011666.1 1933910 1933985 R tRNA-Ala complement(1933910..1933985) Methylocella silvestris BL2 7090888 Msil_R0032 tRNA Msil_R0032 NC_011666.1 1934248 1934324 R tRNA-Ile complement(1934248..1934324) Methylocella silvestris BL2 7090889 Msil_R0034 tRNA Msil_R0034 NC_011666.1 2108352 2108427 R tRNA-Glu complement(2108352..2108427) Methylocella silvestris BL2 7094053 Msil_R0035 tRNA Msil_R0035 NC_011666.1 2112420 2112496 D tRNA-Arg 2112420..2112496 Methylocella silvestris BL2 7094059 Msil_R0036 tRNA Msil_R0036 NC_011666.1 2248393 2248467 R tRNA-Gln complement(2248393..2248467) Methylocella silvestris BL2 7091438 Msil_R0037 tRNA Msil_R0037 NC_011666.1 2291597 2291681 R tRNA-Leu complement(2291597..2291681) Methylocella silvestris BL2 7091482 Msil_R0038 tRNA Msil_R0038 NC_011666.1 2382654 2382743 R tRNA-Ser complement(2382654..2382743) Methylocella silvestris BL2 7093425 Msil_R0041 tRNA Msil_R0041 NC_011666.1 2446211 2446286 R tRNA-Ala complement(2446211..2446286) Methylocella silvestris BL2 7091382 Msil_R0042 tRNA Msil_R0042 NC_011666.1 2446549 2446625 R tRNA-Ile complement(2446549..2446625) Methylocella silvestris BL2 7091383 Msil_R0045 tRNA Msil_R0045 NC_011666.1 3068245 3068321 R tRNA-Arg complement(3068245..3068321) Methylocella silvestris BL2 7092957 Msil_R0046 tRNA Msil_R0046 NC_011666.1 3179567 3179641 D tRNA-Val 3179567..3179641 Methylocella silvestris BL2 7092801 Msil_R0047 tRNA Msil_R0047 NC_011666.1 3206550 3206634 D tRNA-Leu 3206550..3206634 Methylocella silvestris BL2 7092829 Msil_R0048 tRNA Msil_R0048 NC_011666.1 3213632 3213707 D tRNA-Val 3213632..3213707 Methylocella silvestris BL2 7092834 Msil_R0049 tRNA Msil_R0049 NC_011666.1 3216176 3216252 D tRNA-Asp 3216176..3216252 Methylocella silvestris BL2 7092837 Msil_R0050 tRNA Msil_R0050 NC_011666.1 3238408 3238482 D tRNA-Val 3238408..3238482 Methylocella silvestris BL2 7092857 Msil_R0051 tRNA Msil_R0051 NC_011666.1 3290225 3290301 D tRNA-Arg 3290225..3290301 Methylocella silvestris BL2 7093477 Msil_R0052 tRNA Msil_R0052 NC_011666.1 3300901 3300975 R tRNA-Gly complement(3300901..3300975) Methylocella silvestris BL2 7093483 Msil_R0053 tRNA Msil_R0053 NC_011666.1 3386056 3386131 D tRNA-Glu 3386056..3386131 Methylocella silvestris BL2 7092751 Msil_R0055 tRNA Msil_R0055 NC_011666.1 3814341 3814417 R tRNA-His complement(3814341..3814417) Methylocella silvestris BL2 7092497 Msil_R0057 tRNA Msil_R0057 NC_011666.1 3927895 3927970 D tRNA-Ala 3927895..3927970 Methylocella silvestris BL2 7092427 Msil_R0058 tRNA Msil_R0058 NC_011666.1 4263942 4264018 D tRNA-Met 4263942..4264018 Methylocella silvestris BL2 7092581 Msil_R0029 rRNA Msil_R0029 NC_011666.1 1930147 1930260 R 5S ribosomal RNA complement(1930147..1930260) Methylocella silvestris BL2 7090886 Msil_R0030 rRNA Msil_R0030 NC_011666.1 1930513 1933383 R 23S ribosomal RNA complement(1930513..1933383) Methylocella silvestris BL2 7090887 Msil_R0033 rRNA Msil_R0033 NC_011666.1 1934569 1936043 R 16S ribosomal RNA complement(1934569..1936043) Methylocella silvestris BL2 7090890 Msil_R0039 rRNA Msil_R0039 NC_011666.1 2442448 2442561 R 5S ribosomal RNA complement(2442448..2442561) Methylocella silvestris BL2 7091380 Msil_R0040 rRNA Msil_R0040 NC_011666.1 2442814 2445684 R 23S ribosomal RNA complement(2442814..2445684) Methylocella silvestris BL2 7091381 Msil_R0043 rRNA Msil_R0043 NC_011666.1 2446870 2448344 R 16S ribosomal RNA complement(2446870..2448344) Methylocella silvestris BL2 7091384