-- dump date 20240506_071709 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP129884.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP129884.1.REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9bREFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0xREFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinIONREFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236 Genes (coding) :: 4,206REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236 Genes (coding) :: 4,206 CDSs (with protein) :: 4,206REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236 Genes (coding) :: 4,206 CDSs (with protein) :: 4,206 Genes (RNA) :: 60REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236 Genes (coding) :: 4,206 CDSs (with protein) :: 4,206 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236 Genes (coding) :: 4,206 CDSs (with protein) :: 4,206 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236 Genes (coding) :: 4,206 CDSs (with protein) :: 4,206 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 47REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236 Genes (coding) :: 4,206 CDSs (with protein) :: 4,206 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236 Genes (coding) :: 4,206 CDSs (with protein) :: 4,206 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 30REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236 Genes (coding) :: 4,206 CDSs (with protein) :: 4,206 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 30 CDSs (without protein) :: 30REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236 Genes (coding) :: 4,206 CDSs (with protein) :: 4,206 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 30 CDSs (without protein) :: 30 Pseudo Genes (ambiguous residues) :: 0 of 30REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236 Genes (coding) :: 4,206 CDSs (with protein) :: 4,206 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 30 CDSs (without protein) :: 30 Pseudo Genes (ambiguous residues) :: 0 of 30 Pseudo Genes (frameshifted) :: 12 of 30REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236 Genes (coding) :: 4,206 CDSs (with protein) :: 4,206 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 30 CDSs (without protein) :: 30 Pseudo Genes (ambiguous residues) :: 0 of 30 Pseudo Genes (frameshifted) :: 12 of 30 Pseudo Genes (incomplete) :: 26 of 30REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236 Genes (coding) :: 4,206 CDSs (with protein) :: 4,206 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 30 CDSs (without protein) :: 30 Pseudo Genes (ambiguous residues) :: 0 of 30 Pseudo Genes (frameshifted) :: 12 of 30 Pseudo Genes (incomplete) :: 26 of 30 Pseudo Genes (internal stop) :: 4 of 30REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236 Genes (coding) :: 4,206 CDSs (with protein) :: 4,206 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 30 CDSs (without protein) :: 30 Pseudo Genes (ambiguous residues) :: 0 of 30 Pseudo Genes (frameshifted) :: 12 of 30 Pseudo Genes (incomplete) :: 26 of 30 Pseudo Genes (internal stop) :: 4 of 30 Pseudo Genes (multiple problems) :: 10 of 30REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236 Genes (coding) :: 4,206 CDSs (with protein) :: 4,206 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 30 CDSs (without protein) :: 30 Pseudo Genes (ambiguous residues) :: 0 of 30 Pseudo Genes (frameshifted) :: 12 of 30 Pseudo Genes (incomplete) :: 26 of 30 Pseudo Genes (internal stop) :: 4 of 30 Pseudo Genes (multiple problems) :: 10 of 30 CRISPR Arrays :: 2REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236 Genes (coding) :: 4,206 CDSs (with protein) :: 4,206 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 30 CDSs (without protein) :: 30 Pseudo Genes (ambiguous residues) :: 0 of 30 Pseudo Genes (frameshifted) :: 12 of 30 Pseudo Genes (incomplete) :: 26 of 30 Pseudo Genes (internal stop) :: 4 of 30 Pseudo Genes (multiple problems) :: 10 of 30 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP129884.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 589.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/03/2023 13:38:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,296 CDSs (total) :: 4,236 Genes (coding) :: 4,206 CDSs (with protein) :: 4,206 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 4 Pseudo Genes (total) :: 30 CDSs (without protein) :: 30 Pseudo Genes (ambiguous residues) :: 0 of 30 Pseudo Genes (frameshifted) :: 12 of 30 Pseudo Genes (incomplete) :: 26 of 30 Pseudo Genes (internal stop) :: 4 of 30 Pseudo Genes (multiple problems) :: 10 of 30 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## COMPLETENESS: full length.