-- dump date 20140619_153255 -- class Genbank::CDS -- table cds_note -- id note YP_637179.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. YP_637180.1 binds the polymerase to DNA and acts as a sliding clamp YP_637181.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate YP_637182.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA YP_637183.1 PFAM: protein of unknown function DUF721; KEGG: mpa:MAP0004 hypothetical protein YP_637184.1 negatively supercoils closed circular double-stranded DNA YP_637185.1 KEGG: mle:ML0006 DNA gyrase subunit A; TIGRFAM: DNA gyrase, A subunit Protein splicing (intein) site; PFAM: DNA gyrase/topoisomerase IV, subunit A DNA gyrase C-terminal repeat, beta-propeller; SMART: Hedgehog/intein hint domain-like Hedgehog/intein hint-like YP_637186.1 KEGG: mpa:MAP0007 hypothetical protein YP_637187.1 KEGG: mbo:Mb0008c possible membrane protein YP_637188.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: mbo:Mb0009 probable iron-regulated peptidyl-prolyl CIS-trans isomerase A PpiA (PPIase A) (rotamase A) YP_637189.1 KEGG: mpa:MAP0012c hypothetical protein YP_637190.1 integral membrane protein involved in inhibition of the Z-ring formation YP_637191.1 PFAM: protein of unknown function DUF881; KEGG: mpa:MAP0014 hypothetical protein YP_637192.1 aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity YP_637193.1 PFAM: protein kinase PASTA; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: mbo:Mb0014c transmembrane serine/threonine-protein kinase B PknB (protein kinase B) (StpK B) YP_637194.1 PFAM: protein kinase; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: mle:ML0017 putative serine/threonine protein kinase YP_637195.1 PFAM: penicillin-binding protein, transpeptidase; KEGG: mbo:Mb0016c probable penicillin-binding protein PbpA YP_637196.1 PFAM: cell cycle protein; KEGG: mbo:Mb0017c probable cell division protein RodA YP_637197.1 PFAM: protein phosphatase 2C-like; KEGG: mbo:Mb0018c possible serine/threonine phosphatase ppp YP_637198.1 PFAM: Forkhead-associated; KEGG: mbo:Mb0019c hypothetical protein YP_637199.1 PFAM: Forkhead-associated; KEGG: mtc:MT0023 hypothetical protein YP_637200.1 PFAM: N-6 DNA methylase; KEGG: dar:Daro_1303 N-6 DNA methylase YP_637201.1 KEGG: ade:Adeh_2328 type I restriction-modification system specificity subunit YP_637202.1 KEGG: sme:SMc02292 putative type I restriction enzyme R protein; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction enzyme, res subunit protein of unknown function DUF450; SMART: DEAD/DEAH box helicase-like YP_637203.1 KEGG: cef:CE1462 hypothetical protein YP_637204.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: mca:MCA2276 DNA polymerase bacteriophage-type YP_637208.1 KEGG: cef:CE1182 hypothetical protein YP_637209.1 KEGG: cdi:DIP0077 hypothetical protein YP_637210.1 KEGG: cdi:DIP0079 hypothetical protein YP_637211.1 PFAM: aldo/keto reductase; KEGG: sco:SCO4951 aldoketoreductase YP_637212.1 PFAM: regulatory protein, TetR; KEGG: rpb:RPB_4514 transcriptional regulator, TetR family YP_637213.1 KEGG: tcr:507957.179 mucin-associated surface protein (MASP) PROSITE: ALA_RICH YP_637214.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:bll7862 homoserine O-acetyltransferase YP_637215.1 KEGG: mpa:MAP4336 putative virulence factor YP_637216.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP4304 hypothetical protein YP_637217.1 PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase Male sterility-like; KEGG: mtc:MT0147 dihydroflavonol-4-reductase YP_637218.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP4303c hypothetical protein YP_637219.1 KEGG: mpa:MAP4302c hypothetical protein YP_637220.1 PFAM: protein of unknown function DUF35; KEGG: mpa:MAP4301c hypothetical protein YP_637221.1 KEGG: mbo:Mb2934c hypothetical protein YP_637222.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa33460 putative short chain dehydrogenase YP_637223.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: mpa:MAP1565 molybdate transport system substrate-binding protein YP_637224.1 TIGRFAM: molybdenum-pterin binding domain Excisionase/Xis, DNA-binding; PFAM: regulatory protein, MerR TOBE; KEGG: mpa:MAP1121c hypothetical protein YP_637225.1 KEGG: cgb:cg3016 hypothetical protein YP_637226.1 KEGG: cgb:cg3015 hypothetical protein YP_637227.1 KEGG: cgb:cg3013 hypothetical protein YP_637228.1 PFAM: Forkhead-associated; KEGG: mbo:Mb3893 hypothetical alanine rich protein YP_637229.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mpa:MAP3028 hypothetical protein YP_637230.1 PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mtc:MT3267 hypothetical protein YP_637231.1 KEGG: mpa:MAP2875 hypothetical protein YP_637232.1 KEGG: mpa:MAP0030c hypothetical protein YP_637233.1 PFAM: protein of unknown function DUF55; KEGG: ret:RHE_CH00838 hypothetical protein YP_637234.1 KEGG: nfa:nfa36930 hypothetical protein YP_637235.1 PFAM: transcription factor WhiB; KEGG: mbo:Mb3892c putative transcriptional regulatory protein WhiB-like WhiB6 YP_637236.1 KEGG: mbo:Mb3893 hypothetical alanine rich protein YP_637237.1 KEGG: bja:blr0521 hypothetical protein YP_637238.1 KEGG: mbo:Mb1961c immunogenic protein MPT63 (antigen MPT63/MPB63) (16 KD immunoprotective extracellular protein) YP_637239.1 KEGG: mpa:MAP0171c hypothetical protein YP_637240.1 KEGG: mbo:Mb3896 hypothetical protein YP_637241.1 KEGG: mbo:Mb3897 hypothetical protein YP_637242.1 PFAM: AAA ATPase, central region; SMART: ATPase; KEGG: mle:ML0055 hypothetical protein YP_637243.1 PFAM: protein of unknown function DUF690; KEGG: mbo:Mb3899 possible conserved membrane protein YP_637244.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: mbo:Mb3900 possible conserved membrane protein YP_637245.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase; KEGG: mbo:Mb3901 hypothetical protein YP_637246.1 PFAM: PE-like; KEGG: mbo:Mb3902 PE family-like protein YP_637247.1 PFAM: PPE protein; KEGG: mbo:Mb3903 PPE family protein YP_637248.1 KEGG: mbo:Mb3904 10 kDa culture filtrate antigen LHP (CFP10) YP_637249.1 KEGG: mbo:Mb3905 6 kDa early secretory antigenic target EsaT6 (EsaT-6) YP_637250.1 KEGG: mbo:Mb3906 conserved hypothetical proline and alanine rich protein YP_637251.1 PFAM: protein of unknown function DUF571; KEGG: mbo:Mb3907 probable conserved transmembrane protein YP_637253.1 KEGG: mbo:Mb3910c hypothetical protein YP_637254.1 KEGG: mtc:MT3996 hypothetical protein YP_637255.1 KEGG: mbo:Mb3912c possible conserved membrane protein YP_637256.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: mtu:Rv3883c putative serine protease YP_637257.1 TIGRFAM: Phosphotransferase system, HPr; PFAM: phosphocarrier HPr protein; KEGG: nfa:nfa28530 putative phosphocarrier protein YP_637258.1 TIGRFAM: PTS system, fructose-specific, IIB component PTS system, fructose subfamily, IIA component Phosphotransferase system, fructose IIC component; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 phosphotransferase system, EIIC phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: nfa:nfa28540 putative PTS fructose-specific enzyme IIABC YP_637259.1 PFAM: PfkB; KEGG: nfa:nfa28550 putative fructose-1-phosphate kinase YP_637260.1 PFAM: regulatory protein, DeoR Helix-turn-helix, type 11; KEGG: nfa:nfa28560 putative transcriptional regulator YP_637261.1 TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme PEP-utilising enzyme, mobile region PEP-utilising enzyme-like; KEGG: nfa:nfa28570 putative phosphoenolpyruvate-protein phosphotransferase enzyme I YP_637262.1 PFAM: Pirin-like; KEGG: mpa:MAP3561 hypothetical protein YP_637263.1 KEGG: fra:Francci3_4074 membrane protein-like YP_637264.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa29450 putative transcriptional regulator YP_637265.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb0149 probable transcriptional regulatory protein (possibly TetR-family) YP_637266.1 TIGRFAM: Protein of unknown function Mtu_121; PFAM: O-methyltransferase-like; KEGG: mpa:MAP3564 hypothetical protein YP_637267.1 TIGRFAM: Protein of unknown function Mtu_121; PFAM: O-methyltransferase-like; KEGG: mpa:MAP3563 hypothetical protein YP_637268.1 PFAM: aldehyde dehydrogenase; KEGG: mpa:MAP3566 putative aldehyde dehydrogenase YP_637269.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3567 hypothetical protein YP_637270.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mbo:Mb0154 putative quinone oxidoreductase (NADPH:quinone oxidoreductase) (zeta-crystallin) YP_637271.1 TIGRFAM: haloacid dehalogenase, type II HAD-superfamily hydrolase, subfamily IA, variant 2; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: bja:blr4364 putative haloacid dehalogenase YP_637272.1 PFAM: UbiE/COQ5 methyltransferase Methyltransferase type 11 Methyltransferase type 12; KEGG: sil:SPO2042 methyltransferase, UbiE/COQ5 family YP_637273.1 KEGG: nfa:nfa53640 hypothetical protein YP_637274.1 KEGG: mbo:Mb3546 hypothetical protein YP_637275.1 KEGG: mtc:MT0162 hypothetical protein YP_637276.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP3570c acyl-CoA dehydrogenase YP_637277.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: nfa:nfa35480 putative acyl-CoA dehydrogenase YP_637278.1 PFAM: NAD(P) transhydrogenase, beta subunit; KEGG: sco:SCO7622 NAD(P) transhydrogenase beta subunit YP_637279.1 forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm YP_637280.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa19220 putative short chain dehydrogenase YP_637281.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: sco:SCO2071 Na+/H+ antiporter YP_637282.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_1503 taurine ABC transporter, permease protein YP_637283.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3; KEGG: tfu:Tfu_1504 extracellular solute-binding protein, family 3 YP_637284.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: tfu:Tfu_1505 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component YP_637285.1 KEGG: mtc:MT2026 hypothetical protein YP_637286.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb0163 probable transcriptional regulatory protein (possibly TetR-family) YP_637287.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: nfa:nfa24470 putative acyl-CoA dehydrogenase YP_637288.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mpa:MAP3596c AdhE YP_637289.1 PFAM: thioesterase superfamily; KEGG: mbo:Mb0168 hypothetical protein YP_637290.1 KEGG: mpa:MAP3598 hypothetical protein YP_637291.1 PFAM: regulatory protein GntR, HTH; KEGG: mpa:MAP3599c hypothetical protein YP_637292.1 activates fatty acids by binding to coenzyme A YP_637293.1 PFAM: protein of unknown function DUF140; KEGG: mpa:MAP4082 putative ABC transport system permease protein YP_637294.1 PFAM: protein of unknown function DUF140; KEGG: mbo:Mb0174 conserved hypothetical integral membrane protein YrbE1B YP_637295.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mtc:MT0178 virulence factor YP_637296.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mpa:MAP3605 putative ABC transport system substrate-bindin protein YP_637297.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mbo:Mb0177 MCE-family protein Mce1C YP_637298.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mtc:MT0622 virulence factor mce family protein YP_637299.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mpa:MAP3608 putative ABC transport system substrate-bindin protein YP_637300.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mbo:Mb0180 MCE-family protein Mce1F YP_637301.1 KEGG: mbo:Mb0181 probable conserved MCE associated membrane protein YP_637302.1 PFAM: RDD; KEGG: mbo:Mb0182 probable conserved MCE associated transmembrane protein YP_637303.1 KEGG: mpa:MAP3612 hypothetical protein YP_637304.1 KEGG: mpa:MAP3613 hypothetical protein YP_637305.1 PFAM: protein of unknown function DUF1275; KEGG: mpa:MAP3614 hypothetical protein YP_637306.1 PFAM: aminoglycoside phosphotransferase fructosamine kinase; KEGG: mpa:MAP0551 hypothetical protein YP_637307.1 KEGG: ehi:244.t00012 hypothetical protein PROSITE: ASP_RICH GLU_RICH TYR_RICH YP_637308.1 PFAM: acyltransferase 3; KEGG: mpa:MAP4010c hypothetical protein YP_637309.1 KEGG: mtc:MT0188 hypothetical protein YP_637310.1 KEGG: stm:STM1797 putative transglycosylase-associated protein YP_637311.1 PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: gvi:gll3269 probable L-sorbosone dehydrogenase YP_637312.1 PFAM: Pirin-like; KEGG: fra:Francci3_2960 pirin-like YP_637313.1 PFAM: regulatory protein, MarR; KEGG: pac:PPA2256 putative MarR-family transcriptional regulator YP_637314.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: nfa:nfa16040 putative dehydrogenase YP_637315.1 KEGG: mpa:MAP0813c hypothetical protein YP_637316.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_637317.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP3622 hypothetical protein YP_637318.1 KEGG: sco:SCO0145 putative secreted protein YP_637319.1 KEGG: mpa:MAP3623 hypothetical protein YP_637320.1 KEGG: mpa:MAP3624 hypothetical protein YP_637321.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase O-methyltransferase, family 3 conserved hypothetical protein 95; KEGG: mbo:Mb0193 probable O-methyltransferase YP_637322.1 KEGG: gsu:GSU2322 hypothetical protein YP_637323.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_637324.1 PFAM: protein of unknown function DUF305; KEGG: nfa:nfa38100 hypothetical protein YP_637325.1 PFAM: protein of unknown function DUF156; KEGG: mpa:MAP3632 hypothetical protein YP_637326.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nfa:nfa28900 putative acetyltransferase YP_637327.1 PFAM: major facilitator superfamily MFS_1; KEGG: mtc:MT0201 sugar transporter family protein YP_637328.1 PFAM: ErfK/YbiS/YcfS/YnhG; KEGG: mbo:Mb0198 hypothetical protein YP_637329.1 KEGG: mbo:Mb3191c hypothetical protein YP_637330.1 KEGG: mpa:MAP3219c hypothetical protein YP_637331.1 PFAM: ATPase associated with various cellular activities, AAA_3 ATPase associated with various cellular activities, AAA_5; KEGG: mpa:MAP3218c MoxR3 YP_637332.1 PFAM: protein of unknown function DUF58; KEGG: mtc:MT3252 hypothetical protein YP_637333.1 KEGG: mtc:MT3251 hypothetical protein YP_637334.1 PFAM: peptidase M13, neprilysin peptidase M13; KEGG: mbo:Mb0204c probable zinc metalloprotease YP_637335.1 KEGG: mle:ML2614 hypothetical protein YP_637336.1 KEGG: mbo:Mb0206 possible conserved transmembrane protein YP_637337.1 PFAM: CoA-binding; KEGG: mag:amb2851 protein YccU YP_637338.1 KEGG: mle:ML2616 hypothetical protein YP_637339.1 KEGG: mpa:MAP3637c MmpL11 YP_637340.1 KEGG: mpa:MAP3638 hypothetical protein YP_637341.1 KEGG: mpa:MAP1972c hypothetical protein YP_637342.1 PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: nfa:nfa6640 putative two-component system response regulator YP_637343.1 PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: nfa:nfa6630 putative two-component system sensor kinase YP_637344.1 KEGG: mbo:Mb0407 probable conserved transmembrane protein YP_637345.1 PFAM: conserved hypothetical protein 374; KEGG: mpa:MAP3639c hypothetical protein YP_637346.1 PFAM: protein of unknown function UPF0118; KEGG: mpa:MAP3640 hypothetical protein YP_637347.1 PFAM: protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mpa:MAP2495 hypothetical protein YP_637348.1 KEGG: mtu:Rv0206c conserved large membrane protein YP_637349.1 KEGG: mpa:MAP3642c hypothetical protein YP_637350.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine YP_637351.1 KEGG: mpa:MAP3644 hypothetical protein YP_637352.1 KEGG: mbo:Mb0216 hypothetical protein YP_637353.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP YP_637354.1 activates fatty acids by binding to coenzyme A YP_637355.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP3650 hypothetical protein YP_637356.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: sco:SCO0522 oxidoreductase YP_637357.1 SMART: Helix-turn-helix type 3; KEGG: sco:SCO7706 DNA-binding protein YP_637358.1 PFAM: UbiC transcription regulator-associated; KEGG: mbo:Mb0816c probable transcriptional regulatory protein (probably GntR-family) YP_637359.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP3651c acyl-CoA dehydrogenase YP_637360.1 KEGG: mpa:MAP3652 hypothetical protein YP_637361.1 KEGG: mpa:MAP3653 hypothetical protein YP_637362.1 PFAM: Amidohydrolase 3; KEGG: mpa:MAP3654 hypothetical protein YP_637363.1 PFAM: Ion transport 2; KEGG: dra:DR1911 hypothetical protein YP_637364.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: mpa:MAP1643 socitrate lyase YP_637365.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rso:RSc2321 probable dehydrogenase/reductase oxidoreductase protein YP_637366.1 PFAM: regulatory protein GntR, HTH protein of unknown function UPF0074 UbiC transcription regulator-associated; KEGG: gka:GK2275 transcriptional regulator (GntR family) YP_637367.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rru:Rru_A3017 short-chain dehydrogenase/reductase SDR YP_637368.1 PFAM: aminoglycoside phosphotransferase; KEGG: mlo:mlr6716 hypothetical protein YP_637369.1 KEGG: tel:tlr0311 hypothetical protein YP_637370.1 PFAM: microcompartments protein; KEGG: lin:lin1144 hypothetical protein YP_637371.1 PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: fnu:FN0087 ethanolamine utilization protein eutN YP_637373.1 PFAM: microcompartments protein; KEGG: ana:all3257 hypothetical protein YP_637374.1 PFAM: aldehyde dehydrogenase; KEGG: tel:tlr0227 alcohol dehydrogenase / acetaldehyde dehydrogenase YP_637375.1 PFAM: aminotransferase class-III; KEGG: mlo:mlr6714 ornithine-oxo-acid transaminase YP_637376.1 PFAM: amino acid permease-associated region; KEGG: sma:SAV4543 putative amino acid permease YP_637377.1 PFAM: Alpha/beta hydrolase fold-3; KEGG: mpa:MAP3655c carboxylic ester hydrolases YP_637378.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP3115c FadE22 YP_637379.1 PFAM: Alpha/beta hydrolase fold-3; KEGG: mbo:Mb0226 probable esterase LipC YP_637380.1 PFAM: protein of unknown function UPF0089; KEGG: mpa:MAP3657 hypothetical protein YP_637381.1 KEGG: mpa:MAP1158c LipO YP_637382.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mpa:MAP1160c hypothetical protein YP_637384.1 PFAM: pentapeptide repeat; KEGG: mbo:Mb1575c PPE family protein YP_637387.1 PFAM: protein of unknown function DUF1206; KEGG: nfa:nfa21460 hypothetical protein YP_637388.1 PFAM: N-acetyltransferase; KEGG: mpa:MAP0501 arylamine N-acetyltransferase YP_637389.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: bja:blr0138 hypothetical protein YP_637390.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: nfa:nfa33810 putative acyl-CoA dehydrogenase YP_637391.1 SMART: Helix-turn-helix, AraC type; KEGG: bur:Bcep18194_A4210 transcriptional regulator, AraC family YP_637392.1 PFAM: bifunctional deaminase-reductase-like; KEGG: nfa:nfa6270 hypothetical protein YP_637393.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP3661c hypothetical protein YP_637394.1 PFAM: aldehyde dehydrogenase; KEGG: mtc:MT0233 aldehyde dehydrogenase YP_637395.1 PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: mpa:MAP3663c hypothetical protein YP_637396.1 PFAM: glycosyl transferase, group 1; KEGG: mbo:Mb0230 possible conserved protein YP_637397.1 KEGG: mpa:MAP3665c hypothetical protein YP_637398.1 KEGG: mpa:MAP3666c hypothetical protein YP_637399.1 PFAM: acyltransferase 3; KEGG: mbo:Mb0233 probable integral membrane acyltransferase YP_637400.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll0131 probable acid-CoA ligase YP_637401.1 PFAM: aryldialkylphosphatase; KEGG: mtc:MT0240 parathion hydrolase YP_637402.1 PFAM: protein of unknown function DUF894, DitE major facilitator superfamily MFS_1; KEGG: nfa:nfa35850 putative transporter YP_637403.1 KEGG: mbo:Mb0241c probable conserved transmembrane protein YP_637404.1 KEGG: mbo:Mb0242c small secreted protein YP_637405.1 PFAM: UspA; KEGG: nfa:nfa54660 hypothetical protein YP_637406.1 PFAM: glycoside hydrolase, family 3-like; KEGG: mle:ML2569 putative secreted glycosyl hydrolase YP_637407.1 PFAM: Orn/Lys/Arg decarboxylase, major region aromatic amino acid beta-eliminating lyase/threonine aldolase Orn/Lys/Arg decarboxylase-like; KEGG: cya:CYA_1002 Orn/Lys/Arg decarboxylase YP_637408.1 PFAM: amidohydrolase 2; KEGG: mpa:MAP1600 hypothetical protein YP_637409.1 PFAM: amino acid permease-associated region; KEGG: cac:CAC0852 amino acid permease YP_637410.1 PFAM: glutamine synthetase, catalytic region; KEGG: mpa:MAP1599 GlnA3 YP_637411.1 PFAM: glutamine amidotransferase, class-II; KEGG: blo:BL0195 hypothetical protein with possible glutamine amidotransferase domain YP_637412.1 PFAM: helix-turn-helix protein RpiR sugar isomerase (SIS); KEGG: mlo:mlr3078 hypothetical protein YP_637413.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb0244 possible transcriptional regulatory protein (probably TetR-family) YP_637414.1 PFAM: O-methyltransferase, family 2 Methyltransferase type 12; KEGG: syc:syc1021_d hypothetical protein YP_637416.1 PFAM: MaoC-like dehydratase; KEGG: mbo:Mb0247c hypothetical protein YP_637417.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_637418.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_637419.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP3694c FadE5 YP_637420.1 PFAM: GAF ANTAR; KEGG: sco:SCO7423 hypothetical protein YP_637421.1 PFAM: beta-ketoacyl synthase acyl transferase region NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR phosphopantetheine-binding Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mpa:MAP2230c hypothetical protein YP_637422.1 KEGG: mpa:MAP2231 PapA3_1 YP_637423.1 TIGRFAM: Transport protein; PFAM: MMPL; KEGG: mbo:Mb1215 probable conserved transmembrane transport protein MmpL10 YP_637424.1 activates fatty acids by binding to coenzyme A YP_637425.1 PFAM: PE-PPE-like; KEGG: mpa:MAP2234 hypothetical protein YP_637426.1 KEGG: mpa:MAP2236 hypothetical protein YP_637427.1 PFAM: flavin reductase-like, FMN-binding; KEGG: mbo:Mb0251 putative oxidoreductase YP_637429.1 catalyzes the fumarate and succinate interconversion; fumarate reductase is used under anaerobic conditions with glucose or glycerol as carbon source YP_637430.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_637431.1 KEGG: mbo:Mb0255c putative succinate dehydrogenase [membrane anchor subunit] (succinic dehydrogenase) YP_637432.1 KEGG: mpa:MAP3700c hypothetical protein YP_637433.1 KEGG: nfa:nfa49070 hypothetical protein YP_637434.1 PFAM: heat shock protein Hsp20; KEGG: mpa:MAP3701c Hsp YP_637435.1 TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like nitrite and sulphite reductase 4Fe-4S region BFD-like [2Fe-2S]-binding region; KEGG: mpa:MAP3702 nitrite reductase (NAD(P)H) large subunit YP_637436.1 TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD; KEGG: mbo:Mb0259 probable nitrite reductase [NAD(P)H] small subunit NirD YP_637437.1 KEGG: tfu:Tfu_0895 hypothetical protein YP_637438.1 PFAM: ANTAR; KEGG: mpa:MAP3264c hypothetical protein YP_637439.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: mpa:MAP3705c hypothetical protein YP_637440.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane YP_637441.1 PFAM: major facilitator superfamily MFS_1; KEGG: mbo:Mb0267c probable integral membrane nitrite extrusion protein NarK3 (nitrite facilitator) YP_637442.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mbo:Mb0268c aminoglycoside 2'-N-acetyltransferase AAC (AAC(2')-IC) YP_637443.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP0084c hypothetical protein YP_637444.1 PFAM: Allophanate hydrolase subunit 2; KEGG: mtc:MT0276 urea amidolyase-related protein YP_637445.1 PFAM: Allophanate hydrolase subunit 1; KEGG: mle:ML2549 hypothetical protein YP_637446.1 PFAM: protein of unknown function DUF165; KEGG: nfa:nfa2660 hypothetical protein YP_637447.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: periplasmic binding protein; KEGG: mpa:MAP3710c probable periplasmic iron-transport lipoprotein YP_637448.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa54820 putative short chain dehydrogenase YP_637449.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mbo:Mb2008 probable conserved integral membrane protein YP_637450.1 PFAM: protein of unknown function DUF140; KEGG: mpa:MAP0757 putative ABC transport system permease protein YP_637451.1 PFAM: protein of unknown function DUF140; KEGG: mpa:MAP0758 putative ABC transport system permease protein YP_637452.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mpa:MAP2189 hypothetical protein YP_637453.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mpa:MAP2190 hypothetical protein YP_637454.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mpa:MAP2191 hypothetical protein YP_637455.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mpa:MAP2192 hypothetical protein YP_637456.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mpa:MAP0764 hypothetical protein YP_637457.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mpa:MAP2194 hypothetical protein YP_637458.1 KEGG: mpa:MAP0766c hypothetical protein YP_637459.1 KEGG: mpa:MAP0769 hypothetical protein YP_637460.1 KEGG: mpa:MAP0776c hypothetical protein YP_637461.1 KEGG: mtu:Rv1363c possible membrane protein YP_637462.1 KEGG: mtc:MT1407 hypothetical protein YP_637463.1 PFAM: thioesterase superfamily; KEGG: nfa:nfa33640 hypothetical protein YP_637464.1 catalyzes transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione YP_637465.1 PFAM: transcriptional regulator PadR-like; KEGG: mpa:MAP1431 hypothetical protein YP_637466.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mbo:Mb3394 possible oxidoreductase YP_637467.1 KEGG: mpa:MAP2179 hypothetical protein YP_637468.1 PFAM: luciferase-like; KEGG: nfa:nfa33450 hypothetical protein YP_637469.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa40900 putative short chain dehydrogenase YP_637470.1 initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione YP_637471.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa33460 putative short chain dehydrogenase YP_637472.1 KEGG: nfa:nfa33470 hypothetical protein YP_637473.1 PFAM: Rieske [2Fe-2S] region; KEGG: mpa:MAP1434 hypothetical protein YP_637474.1 KEGG: nfa:nfa33570 hypothetical protein YP_637475.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1435 hypothetical protein YP_637476.1 KEGG: mbo:Mb1413c hypothetical protein YP_637477.1 KEGG: mpa:MAP1437c hypothetical protein YP_637478.1 PFAM: Alpha/beta hydrolase fold-3; KEGG: mpa:MAP1438c LipH YP_637479.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein-like FAD dependent oxidoreductase; KEGG: nfa:nfa4640 hypothetical protein YP_637480.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ttj:TTHA0660 oxidoreductase, short-chain dehydrogenase/reductase family YP_637481.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1439c hypothetical protein YP_637482.1 KEGG: mpa:MAP1440c hypothetical protein YP_637483.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nfa:nfa29860 putative enoyl-CoA hydratase/isomerase family protein YP_637484.1 PFAM: aldehyde dehydrogenase; KEGG: sma:SAV6595 putative aldehyde dehydrogenase YP_637485.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: nar:Saro_1476 alcohol dehydrogenase, zinc-containing YP_637486.1 activates fatty acids by binding to coenzyme A YP_637487.1 KEGG: mpa:MAP1441 hypothetical protein YP_637488.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1442 hypothetical protein YP_637489.1 PFAM: Stress responsive alpha-beta barrel; KEGG: mpa:MAP1443c hypothetical protein YP_637490.1 KEGG: mpa:MAP1444c hypothetical protein YP_637491.1 PFAM: Alpha/beta hydrolase fold-3; KEGG: mpa:MAP1445c hypothetical protein YP_637492.1 PFAM: regulatory proteins, IclR; KEGG: mpa:MAP1446c hypothetical protein YP_637493.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein-like FAD dependent oxidoreductase; KEGG: mpa:MAP1447c hypothetical protein YP_637494.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nfa:nfa40980 putative ring-cleavage dioxygenase YP_637495.1 PFAM: Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP1448c hypothetical protein YP_637496.1 PFAM: ferredoxin oxidoreductase FAD/NAD(P)-binding Oxidoreductase FAD-binding region; KEGG: nfa:nfa50680 putative oxidoreductase YP_637497.1 PFAM: FAD dependent oxidoreductase; KEGG: mpa:MAP1450c hypothetical protein YP_637498.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1449c hypothetical protein YP_637499.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1451 hypothetical protein YP_637500.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP1452c hypothetical protein YP_637501.1 PFAM: regulatory protein, TetR; KEGG: mtc:MT3679 transcriptional regulator, TetR family YP_637502.1 PFAM: General substrate transporter major facilitator superfamily MFS_1; KEGG: nfa:nfa33530 putative transporter YP_637503.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: nfa:nfa8050 putative short chain dehydrogenase YP_637504.1 KEGG: jan:Jann_2195 hypothetical protein YP_637505.1 PFAM: UspA; KEGG: nfa:nfa35690 hypothetical protein YP_637506.1 PFAM: luciferase-like; KEGG: mpa:MAP1430c hypothetical protein YP_637507.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0665c hypothetical protein YP_637508.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0666c hypothetical protein YP_637509.1 PFAM: cytochrome P450; KEGG: mpa:MAP0668 hypothetical protein YP_637510.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mpa:MAP2781 hypothetical protein YP_637511.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP2780 hypothetical protein YP_637512.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP2779 short chain dehydrogenase YP_637513.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP2778c hypothetical protein YP_637514.1 PFAM: protein of unknown function DUF899, thioredoxin-like; KEGG: mpa:MAP1702c hypothetical protein YP_637515.1 PFAM: protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mpa:MAP2495 hypothetical protein YP_637516.1 PFAM: regulatory protein GntR, HTH GntR-like; KEGG: tfu:Tfu_1374 regulatory protein GntR, HTH YP_637517.1 PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV6466 putative transmembrane transport protein YP_637518.1 KEGG: mbo:Mb2500 possible alanine and proline rich membrane protein YP_637519.1 PFAM: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: nfa:nfa32010 hypothetical protein YP_637520.1 KEGG: mpa:MAP0781 FadD16 YP_637523.1 TIGRFAM: Trehalose synthase; PFAM: alpha amylase, catalytic region; KEGG: psp:PSPPH_2425 trehalose synthase YP_637524.1 PFAM: aminotransferase class-III; KEGG: sco:SCO3622 hypothetical protein YP_637525.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: tfu:Tfu_0687 methylmalonate-semialdehyde dehydrogenase YP_637526.1 PFAM: helix-turn-helix, Fis-type purine catabolism PurC-like; KEGG: tfu:Tfu_0685 putative regulatory protein YP_637527.1 PFAM: response regulator receiver ATP-binding region, ATPase-like histidine kinase A-like Stage II sporulation E PAS fold-4 PAS fold; SMART: PAS PAC motif Protein phosphatase 2C-like; KEGG: gvi:glr2749 two-component hybrid sensor and regulator YP_637528.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mpa:MAP2077c hypothetical protein YP_637529.1 PFAM: ribonuclease BN; KEGG: mpa:MAP1682c hypothetical protein YP_637530.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: lxx:Lxx08900 xanthine/uracil permease YP_637531.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport YP_637532.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sru:SRU_0317 putative filamentous hemagglutinin YP_637533.1 TIGRFAM: GGDEF domain; PFAM: GGDEF; KEGG: tbd:Tbd_2814 putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain YP_637534.1 PFAM: TENA/THI-4 protein; KEGG: sto:ST1007 hypothetical transcriptional activator YP_637535.1 KEGG: bce:BC1708 hypothetical protein YP_637536.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mpa:MAP4007c hypothetical protein YP_637537.1 KEGG: mpa:MAP3713c hypothetical protein YP_637538.1 activates fatty acids by binding to coenzyme A YP_637539.1 KEGG: nfa:nfa24380 hypothetical protein YP_637540.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: pfo:Pfl_4137 ADP-ribosylation/crystallin J1 YP_637541.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0865 probable transport protein YP_637542.1 KEGG: mbo:Mb2718c hypothetical protein YP_637543.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP3716c FadE6 YP_637544.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb0281c possible transcriptional regulatory protein (possibly TetR-family) YP_637545.1 KEGG: mpa:MAP3724 hypothetical protein YP_637546.1 TIGRFAM: Protein of unknown function Mtu_121; PFAM: O-methyltransferase-like; KEGG: mbo:Mb0289 hypothetical protein YP_637547.1 PFAM: AAA ATPase, central region; SMART: ATPase; KEGG: mpa:MAP3778 hypothetical protein YP_637548.1 PFAM: protein of unknown function DUF690; KEGG: mbo:Mb0291 possible conserved membrane protein YP_637549.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase; KEGG: mpa:MAP3780 hypothetical protein YP_637550.1 PFAM: PE-like; KEGG: mbo:Mb0293 PE family protein YP_637551.1 PFAM: PPE protein; KEGG: mbo:Mb0294 PPE family protein YP_637552.1 PFAM: transposase, IS111A/IS1328/IS1533 transposase IS116/IS110/IS902; KEGG: mpa:MAP3748c IS1110 transposase YP_637553.1 KEGG: mpa:MAP3783 hypothetical protein YP_637554.1 KEGG: mpa:MAP3784 hypothetical protein YP_637555.1 KEGG: mle:ML2530 possible DNA-binding protein YP_637556.1 PFAM: protein of unknown function DUF571; KEGG: mpa:MAP3786 hypothetical protein YP_637557.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: mpa:MAP3787 hypothetical protein YP_637558.1 KEGG: mbo:Mb0300 probable conserved transmembrane protein YP_637559.1 PFAM: Lactate/malate dehydrogenase; KEGG: pac:PPA0887 L-lactate dehydrogenase YP_637560.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_637561.1 KEGG: mpa:MAP3177 hypothetical protein YP_637562.1 KEGG: mbo:Mb0301c hypothetical protein YP_637563.1 catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate YP_637564.1 KEGG: nfa:nfa24540 putative sulfate adenylyltransferase subunit 1; TIGRFAM: Small GTP-binding protein domain Sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding adenylylsulfate kinase elongation factor Tu, domain 2 YP_637565.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_637566.1 KEGG: mpa:MAP2118 hypothetical protein YP_637567.1 PFAM: sulfatase; KEGG: mbo:Mb0304c probable sulfatase YP_637568.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mpa:MAP2229 hypothetical protein YP_637569.1 KEGG: mpa:MAP3794c hypothetical protein YP_637570.1 PFAM: phosphoesterase, PA-phosphatase related; KEGG: mbo:Mb0316 probable conserved integral membrane protein YP_637571.1 PFAM: phosphoesterase, PA-phosphatase related diacylglycerol kinase, catalytic region; KEGG: fra:Francci3_3059 phosphoesterase, PA-phosphatase related YP_637572.1 KEGG: fra:Francci3_2809 hypothetical protein YP_637573.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: fra:Francci3_2808 hypothetical protein YP_637574.1 KEGG: mbo:Mb0317 possible conserved exported protein YP_637575.1 KEGG: mpa:MAP3797c hypothetical protein YP_637576.1 KEGG: rpa:RPA2585 hypothetical protein YP_637577.1 PFAM: monooxygenase, FAD-binding Rieske [2Fe-2S] region FAD dependent oxidoreductase; KEGG: mpa:MAP1672 hypothetical protein YP_637578.1 KEGG: mbo:Mb0320 conserved hypothetical proline and threonine rich protein YP_637579.1 PFAM: fatty acid desaturase; KEGG: nfa:nfa46030 putative fatty acid desaturase YP_637580.1 PFAM: alpha/beta hydrolase fold; KEGG: fra:Francci3_3776 alpha/beta hydrolase fold YP_637581.1 KEGG: cac:CAC2556 endoglucanase, family 26; S-layer homology domain YP_637582.1 PFAM: GAF Stage II sporulation E; SMART: Protein phosphatase 2C-like; KEGG: cef:CE1201 putative regulatory protein YP_637583.1 PFAM: glycosyl transferase, family 2; KEGG: cef:CE1202 putative cellulose synthase catalytic subunit YP_637584.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cef:CE1204 putative anti-sigma factor antagonist YP_637585.1 KEGG: cef:CE1205 hypothetical protein YP_637586.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP3711c hypothetical protein YP_637588.1 KEGG: mpa:MAP0847 hypothetical protein YP_637590.1 KEGG: mpa:MAP3824 hypothetical protein YP_637591.1 KEGG: mbo:Mb0328 possible conserved exported protein YP_637593.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: glycoside hydrolase, family 16; KEGG: mbo:Mb0323 possible beta-1,3-glucanase precursor YP_637595.1 KEGG: mpa:MAP0778 hypothetical protein YP_637596.1 PFAM: PE-PPE-like; KEGG: mbo:Mb2640 PPE family protein YP_637598.1 KEGG: nfa:nfa41140 hypothetical protein YP_637599.1 PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase dTDP-4-dehydrorhamnose reductase Male sterility-like; KEGG: cef:CE0059 hypothetical protein YP_637600.1 PFAM: short-chain dehydrogenase/reductase SDR Male sterility-like; KEGG: sme:SMb20076 short chain dehydrogenase YP_637601.1 PFAM: secretory lipase; KEGG: mpa:MAP1286c hypothetical protein YP_637602.1 KEGG: sma:SAV5485 hypothetical protein YP_637603.1 PFAM: HNH endonuclease protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mtc:MT2071 hypothetical protein YP_637604.1 PFAM: regulatory protein, LuxR Tetratricopeptide TPR_4; KEGG: sco:SCO5506 regulatory protein YP_637605.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase UbiE/COQ5 methyltransferase Methyltransferase type 11 Methyltransferase type 12; KEGG: nfa:nfa1190 hypothetical protein YP_637607.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis YP_637608.1 KEGG: mpa:MAP3821 hypothetical protein YP_637610.1 PFAM: cytochrome P450; KEGG: mbo:Mb1912c probable cytochrome p450 140 CYP140 YP_637611.1 PFAM: protein of unknown function DUF1503; KEGG: mpa:MAP3826 hypothetical protein YP_637612.1 KEGG: mbo:Mb0340 hypothetical protein YP_637613.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mbo:Mb0341 probable glucose-1-phosphate thymidylyltransferase RmlA (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase) YP_637614.1 PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: dra:DRA0237 oxidoreductase YP_637615.1 PFAM: molybdopterin dehydrogenase, FAD-binding CO dehydrogenase flavoprotein-like; KEGG: dra:DRA0236 oxidoreductase YP_637616.1 PFAM: ferredoxin [2Fe-2S]-binding; KEGG: xcb:XC_1385 oxidoreductase YP_637617.1 PFAM: YibE/F-like; KEGG: mpa:MAP3829c hypothetical protein YP_637618.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor YP_637619.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding protein of unknown function DUF224, cysteine-rich region; KEGG: mpa:MAP3831c hypothetical protein YP_637620.1 PFAM: regulatory protein, LuxR Sigma-70, region 4 type 2; KEGG: mbo:Mb0346c possible transcriptional regulatory protein YP_637621.1 KEGG: mbo:Mb0320 conserved hypothetical proline and threonine rich protein YP_637622.1 KEGG: mbo:Mb0347 hypothetical protein YP_637623.1 KEGG: mbo:Mb0348 isoniazid inductible gene protein IniB YP_637624.1 KEGG: mtc:MT0357 hypothetical protein YP_637625.1 KEGG: mbo:Mb0350 isoniazid inductible gene protein IniC YP_637626.1 KEGG: mbo:Mb2287c conserved hypothetical proline rich protein YP_637627.1 KEGG: cel:C30H6.11 Hypothetical protein C30H6.11 YP_637628.1 PFAM: luciferase-like; KEGG: tfu:Tfu_1926 hypothetical protein YP_637629.1 KEGG: mpa:MAP2070 hypothetical protein YP_637630.1 KEGG: sma:SAV155 hypothetical protein YP_637631.1 KEGG: cpe:CPE2511 ferredoxin [3Fe-4S] YP_637632.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sma:SAV1609 putative ferredoxin reductase YP_637634.1 KEGG: mpa:MAP1604c LppE YP_637635.1 PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mpa:MAP1219c hypothetical protein YP_637636.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_637637.1 KEGG: mbo:Mb0351c probable lipoprotein LpqJ YP_637638.1 KEGG: nfa:nfa28310 hypothetical protein YP_637639.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria YP_637640.1 PFAM: GrpE protein; KEGG: mpa:MAP3841 GrpE YP_637641.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion YP_637642.1 PFAM: regulatory protein, MerR; KEGG: mpa:MAP3843 HspR YP_637643.1 involved in the fifth mannose transfer of phosphatidylinositol mannoside synthesis YP_637644.1 involved in the fifth mannose transfer of phosphatidylinositol mannoside synthesis YP_637645.1 involved in the fifth mannose transfer of phosphatidylinositol mannoside synthesis YP_637646.1 PFAM: Aldose 1-epimerase; KEGG: mpa:MAP3850c hypothetical protein YP_637647.1 PFAM: globin oxidoreductase FAD/NAD(P)-binding Oxidoreductase FAD-binding region; KEGG: mpa:MAP3851c hypothetical protein YP_637648.1 KEGG: cjk:jk0324 hypothetical protein YP_637649.1 PFAM: regulatory protein, TetR; KEGG: sma:SAV4715 putative TetR-family transcriptional regulator YP_637650.1 KEGG: mpa:MAP3807 hypothetical protein YP_637655.1 PFAM: AAA ATPase, central region Clp, N terminal ATPase associated with various cellular activities, AAA_5 ATPase AAA-2; SMART: ATPase; KEGG: mpa:MAP3853 ATP-dependent Clp protease, ATP-binding subunit ClpB YP_637656.1 KEGG: mpa:MAP3855 hypothetical protein YP_637657.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3856 hypothetical protein YP_637658.1 KEGG: mbo:Mb0388c hypothetical protein YP_637659.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mpa:MAP3859 hypothetical protein YP_637660.1 PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO1567 putative transmembrane-transport protein YP_637661.1 PFAM: regulatory protein, TetR; KEGG: sma:SAV6781 putative TetR-family transcriptional regulator YP_637662.1 PFAM: glycoside hydrolase, family 76; KEGG: mpa:MAP3860 hypothetical protein YP_637663.1 PFAM: DSBA oxidoreductase Na+/H+ antiporter NhaA; KEGG: sco:SCO0285 sodium/proton antiporter YP_637664.1 PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: mbo:Mb0384 probable transcriptional regulatory protein (probably LysR-family) YP_637665.1 PFAM: protein of unknown function DUF182; KEGG: mbo:Mb0383c xanthine dehydrogenase accessory factor YP_637666.1 PFAM: molybdopterin dehydrogenase, FAD-binding CO dehydrogenase flavoprotein-like; KEGG: mtc:MT0390 carbon monoxide dehydrogenase, medium subunit, putative YP_637667.1 PFAM: ferredoxin [2Fe-2S]-binding; KEGG: mbo:Mb0381c probable carbon monoxyde dehydrogenase (small chain) YP_637668.1 TIGRFAM: Carbon-monoxide dehydrogenase, large subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mtc:MT0388 carbon monoxide dehydrogenase, large subunit, putative YP_637669.1 PFAM: protein of unknown function DUF182; KEGG: mtc:MT0387 xanthine dehydrogenase accessory factor YP_637670.1 KEGG: mbo:Mb0377c possible oxidoreductase YP_637671.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: mtc:MT0384.1 hypothetical protein YP_637672.1 PFAM: VWA containing CoxE-like; SMART: von Willebrand factor, type A; KEGG: mtc:MT0384 hypothetical protein YP_637673.1 PFAM: alpha/beta hydrolase fold; KEGG: bps:BPSS0938 family S33 non-peptidase homologue YP_637674.1 KEGG: fra:Francci3_0059 conserved hypothetical protein YP_637675.1 PFAM: selenium-binding protein; KEGG: reu:Reut_B5039 56kDa selenium binding YP_637676.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sma:SAV1067 putative dehydrogenase YP_637677.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: xft:PD0091 hypothetical protein YP_637678.1 KEGG: nfa:nfa53840 putative membrane protein YP_637679.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mpa:MAP1613c putative alcohol dehydrogenase YP_637680.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate YP_637681.1 KEGG: mpa:MAP3863c hypothetical protein YP_637682.1 KEGG: mpa:MAP3864 hypothetical protein YP_637683.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mpa:MAP3865c obalt-zinc-cadmium resistance protein YP_637684.1 PFAM: peptidase M50; KEGG: mbo:Mb0366 probable conserved integral membrane protein YP_637685.1 PFAM: regulatory protein GntR, HTH GntR-like; KEGG: sma:SAV6724 putative GntR-family transcriptional regulator YP_637686.1 PFAM: glutamine amidotransferase class-I peptidase C26; KEGG: sco:SCO1615 hypothetical protein YP_637687.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: gka:GKP30 alcohol dehydrogenase YP_637688.1 KEGG: bja:blr2938 cyclohexanone monooxygenase YP_637689.1 PFAM: glutamine synthetase, catalytic region; KEGG: sma:SAV6725 putative glutamine synthetase YP_637690.1 PFAM: amino acid permease-associated region; KEGG: sto:ST0150 hypothetical protein YP_637691.1 KEGG: mpa:MAP3867c hypothetical protein YP_637692.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_637693.1 PFAM: thioesterase superfamily; KEGG: mpa:MAP3870 hypothetical protein YP_637694.1 KEGG: mac:MA2638 hypothetical protein YP_637695.1 PFAM: cytochrome P450; KEGG: fra:Francci3_1599 cytochrome P450 YP_637696.1 PFAM: MMPL; KEGG: mpa:MAP3080 hypothetical protein YP_637697.1 PFAM: regulatory protein, MarR; KEGG: mpa:MAP3077 hypothetical protein YP_637698.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: sma:SAV3010 putative sodium/proton antiporter YP_637699.1 SMART: Zinc finger, UBP-type; KEGG: ade:Adeh_0986 zinc finger, UBP-type YP_637700.1 PFAM: ATP-dependent carboxylate-amine ligase-like, ATP-grasp; KEGG: mtc:MT0401 phosphoribosylglycinamide formyltransferase 2 YP_637702.1 SMART: Rhodanese-like; KEGG: mbo:Mb0396 hypothetical protein YP_637703.1 KEGG: mbo:Mb0397 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes YP_637705.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa21990 putative short chain dehydrogenase YP_637706.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpa:MAP3882 hypothetical protein YP_637708.1 PFAM: beta-lactamase-like; KEGG: mpa:MAP3883c hypothetical protein YP_637709.1 PFAM: luciferase-like; KEGG: mpa:MAP3884 hypothetical protein YP_637710.1 KEGG: cef:CE0130 hypothetical protein YP_637711.1 KEGG: cef:CE0126 hypothetical protein YP_637712.1 KEGG: cef:CE0129 hypothetical protein YP_637713.1 KEGG: ade:Adeh_0244 LigA YP_637714.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate YP_637715.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA YP_637716.1 KEGG: dvu:DVUA0073 asparagine synthase (glutamine-hydrolyzing), putative YP_637717.1 PFAM: protein kinase; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: mbo:Mb0418c serine/threonine-protein kinase PknG (protein kinase G) (StpK G) YP_637718.1 PFAM: extracellular solute-binding protein, family 3; KEGG: mpa:MAP3894c glutamine transport system substrate-binding protein YP_637719.1 KEGG: mbo:Mb0420c possible conserved membrane protein YP_637720.1 PFAM: NUDIX hydrolase; KEGG: mpa:MAP3896 MutT3 YP_637721.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate YP_637722.1 TIGRFAM: Glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: mpa:MAP3898 amino acid oxidase flavoprotein ThiO, putative YP_637723.1 with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate YP_637724.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate YP_637725.1 KEGG: mpa:MAP3901 hypothetical protein YP_637726.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: fra:Francci3_4341 ABC transporter related YP_637727.1 KEGG: nfa:nfa53350 putative ABC transporter membrane protein YP_637728.1 KEGG: lma:LmjF35.0520 proteophosphoglycan ppg4 YP_637729.1 KEGG: bba:Bd2936 hypothetical protein YP_637730.1 PFAM: peptidase M20 protease-associated PA peptidase M28; KEGG: mpa:MAP3906 LpqL_1 YP_637731.1 PFAM: peptidase M20 protease-associated PA peptidase M28; KEGG: mpa:MAP3907 LpqL_2 YP_637732.1 KEGG: spn:SP1772 cell wall surface anchor family protein YP_637733.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: lxx:Lxx08910 xanthine/uracil permease YP_637734.1 PFAM: amino acid permease-associated region Amino acid transporter, transmembrane; KEGG: sco:SCO4612 amino acid transporter YP_637735.1 KEGG: mpa:MAP0118 hypothetical protein YP_637736.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0116 hypothetical protein YP_637737.1 KEGG: nfa:nfa45370 hypothetical protein YP_637738.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpa:MAP2018c hypothetical protein YP_637739.1 KEGG: tfu:Tfu_2084 hypothetical protein YP_637740.1 KEGG: mpa:MAP3911c hypothetical protein YP_637741.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine YP_637742.1 PFAM: major facilitator superfamily MFS_1; KEGG: mpa:MAP2081 hypothetical protein YP_637743.1 PFAM: regulatory protein, LuxR; KEGG: sma:SAV2033 putative LuxR-family transcriptional regulator YP_637744.1 TIGRFAM: exodeoxyribonuclease III exodeoxyribonuclease III (xth); PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mpa:MAP3916c exodeoxyribonuclease III YP_637745.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mtc:MT0443 hypothetical protein YP_637746.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_637747.1 KEGG: mpa:MAP3919 hypothetical protein YP_637748.1 KEGG: mbo:Mb0439 putative tuberculin related peptide YP_637749.1 PFAM: superoxide dismutase, copper/zinc binding; KEGG: mbo:Mb0440 probable periplasmic superoxide dismutase [Cu-Zn] SodC YP_637750.1 ATP-dependent carboxylate-amine ligase YP_637752.1 PFAM: peptidase S16, lon-like; KEGG: mbo:Mb0442 hypothetical protein YP_637753.1 KEGG: mpa:MAP0389 hypothetical protein YP_637754.1 TIGRFAM: Dyp-type peroxidase; KEGG: mpa:MAP0388 hypothetical protein YP_637756.1 KEGG: mpa:MAP0387 hypothetical protein YP_637757.1 TIGRFAM: Protein of unknown function Mtu_121; PFAM: O-methyltransferase-like; KEGG: mpa:MAP4078 hypothetical protein YP_637758.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport YP_637759.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_637760.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport YP_637761.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone YP_637762.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_637763.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_637764.1 PFAM: Arsenical pump membrane protein Citrate transporter; KEGG: nfa:nfa7840 putative transporter YP_637765.1 PFAM: CBS; KEGG: mpa:MAP2804 hypothetical protein YP_637766.1 PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase, dimerisation and phosphoacceptor region; KEGG: nfa:nfa7820 putative two-component system sensor kinase YP_637767.1 PFAM: regulatory protein, LuxR response regulator receiver Sigma-70, region 4 type 2; KEGG: nfa:nfa7810 putative two-component system response regulator YP_637768.1 PFAM: protein of unknown function DUF1707; KEGG: tfu:Tfu_2119 hypothetical protein YP_637769.1 KEGG: mpa:MAP3928c putative cell division protein ftsH homolog; PFAM: AAA ATPase, central region; SMART: ATPase YP_637770.1 KEGG: mpa:MAP3929c CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_637771.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine YP_637772.1 PFAM: molybdopterin binding domain MoeA-like, domain I and II MoeA-like, domain IV; KEGG: mpa:MAP3932c molybdopterin biosynthesis protein MoeA YP_637773.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mbo:Mb0447c short chain dehydrogenase YP_637774.1 PFAM: membrane-flanked domain; KEGG: mbo:Mb1259c probable transmembrane protein YP_637775.1 PFAM: membrane-flanked domain; KEGG: mbo:Mb1258c probable transmembrane protein YP_637776.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: mbo:Mb1257c hypothetical protein YP_637777.1 KEGG: mpa:MAP0481c hypothetical protein YP_637778.1 PFAM: regulatory protein, LuxR; KEGG: bur:Bcep18194_B1407 transcriptional regulator, LuxR family YP_637779.1 PFAM: type III restriction enzyme, res subunit DEAD/DEAH box helicase-like; KEGG: mpa:MAP2985 hypothetical protein YP_637780.1 PFAM: ABC transporter related; KEGG: dra:DRA0188 excinuclease ABC, subunit A YP_637781.1 PFAM: Cupin 2, conserved barrel; KEGG: mpa:MAP3934c hypothetical protein YP_637782.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mbo:Mb0069 short chain dehydrogenase YP_637783.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb0068c possible transcriptional regulatory protein (possibly TetR-family) YP_637784.2 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth YP_637785.1 KEGG: mbo:Mb3585c hypothetical protein YP_637786.1 PFAM: D-aminoacylase-like Amidohydrolase 3; KEGG: mpa:MAP3940c hypothetical protein YP_637787.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpa:MAP3941 GloA YP_637788.1 KEGG: mpa:MAP3942 hypothetical protein YP_637789.1 PFAM: phosphoesterase, PA-phosphatase related; KEGG: nfa:nfa24800 hypothetical protein YP_637790.1 PFAM: aldehyde dehydrogenase; KEGG: nfa:nfa3930 putative aldehyde dehydrogenase YP_637791.1 KEGG: mpa:MAP3943 hypothetical protein YP_637792.1 catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_637793.1 PFAM: cytochrome P450; KEGG: nfa:nfa43600 cytochrome P450 monooxygenase YP_637794.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll2711 putative oxidoreductase YP_637795.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: chy:CHY_1120 ferredoxin YP_637796.1 PFAM: cytochrome P450; KEGG: mpa:MAP0727 hypothetical protein YP_637797.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0770c hypothetical protein YP_637798.1 PFAM: HNH endonuclease protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mtu:Rv3776 hypothetical protein YP_637799.1 PFAM: Integrase, catalytic region; KEGG: cgb:cg2914 transposase YP_637800.1 PFAM: peptidase S9, prolyl oligopeptidase active site region peptidase S9A, prolyl oligopeptidase-like beta-propeller; KEGG: mbo:Mb0466c probable peptidase YP_637801.1 KEGG: nfa:nfa29480 hypothetical protein YP_637802.1 TIGRFAM: Insect alcohol dehydrogenase family; PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa30760 putative short chain dehydrogenase YP_637803.1 PFAM: GAF; KEGG: sco:SCO6105 regulatory protein YP_637804.1 PFAM: aldehyde dehydrogenase; KEGG: mpa:MAP3952 aldehyde dehydrogenase YP_637805.1 PFAM: protein of unknown function DUF779; KEGG: mbo:Mb0468 hypothetical protein YP_637806.1 KEGG: mtc:MT0476 hypothetical protein YP_637807.1 KEGG: mtc:MT0477 hypothetical protein YP_637808.1 E3 component of alpha keto acid dehydrogenase complexes LpdC; forms a homodimer; binds one molecule of FAD monomer; catalyzes NAD+-dependent oxidation of dihydrolipoyl cofactors that are covalently linked to the E2 component YP_637809.1 KEGG: mle:ML2388 possible membrane protein YP_637810.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mpa:MAP3958c hypothetical protein YP_637811.1 PFAM: helix-turn-helix motif protein of unknown function DUF955; KEGG: mpa:MAP3959c hypothetical protein YP_637812.1 PFAM: acyl-ACP thioesterase; KEGG: mpa:MAP3960 hypothetical protein YP_637813.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: mpa:MAP3961 isocitrate lyase YP_637814.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA YP_637815.1 KEGG: mpa:MAP1247 hypothetical protein YP_637816.1 PFAM: protein of unknown function DUF344; KEGG: nfa:nfa52170 hypothetical protein YP_637817.1 PFAM: regulatory protein, TetR; KEGG: mle:ML2457 possible TetR-family transcriptional regulator YP_637818.1 PFAM: protein of unknown function DUF445; KEGG: mpa:MAP3966 hypothetical protein YP_637819.1 PFAM: helix-turn-helix motif; KEGG: mpa:MAP3967 hypothetical protein YP_637820.1 KEGG: mtc:MT0493 conserved hypothetical protein YP_637821.1 KEGG: mle:ML2453 conserved membrane protein YP_637822.1 KEGG: mpa:MAP3970 hypothetical protein YP_637823.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate YP_637824.1 KEGG: mpa:MAP3972c hypothetical protein YP_637825.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mpa:MAP3973c hypothetical protein YP_637826.1 PFAM: Na+/solute symporter; KEGG: hma:pNG7065 probable sodium:solute symporter YP_637827.1 KEGG: nfa:nfa52000 hypothetical protein YP_637828.1 KEGG: nfa:nfa51990 hypothetical protein YP_637829.1 KEGG: mbo:Mb0491c hypothetical protein YP_637830.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_637831.1 PFAM: ErfK/YbiS/YcfS/YnhG; KEGG: mbo:Mb0493 probable conserved lipoprotein LprQ YP_637832.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3977c putative short-chain type oxidoreductase YP_637833.1 PFAM: ROK; KEGG: mpa:MAP3978 hypothetical protein YP_637834.1 PFAM: glycosyl transferase, group 1; KEGG: mbo:Mb0496 mannosyltransferase YP_637835.1 KEGG: mpa:MAP3980 hypothetical protein YP_637836.1 KEGG: mpa:MAP3981 phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase YP_637837.1 PFAM: ATP-binding region, ATPase-like histidine kinase A-like; KEGG: mbo:Mb0500 putative two component sensor histidine kinase SenX3 YP_637838.1 PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mbo:Mb0501 two component sensory transduction protein RegX3 (transcriptional regulatory protein) (probably LuxR-family) YP_637839.1 PFAM: YCII-related; KEGG: mlo:mlr8183 hypothetical protein YP_637840.1 KEGG: mpa:MAP3986c hypothetical protein YP_637841.1 PFAM: Ppx/GppA phosphatase; KEGG: mpa:MAP3987 hypothetical protein YP_637842.1 KEGG: mpa:MAP3988 hypothetical protein YP_637843.1 PFAM: Xylose isomerase-like TIM barrel; KEGG: mpa:MAP3989 hypothetical protein YP_637844.1 KEGG: mbo:Mb0510 hypothetical protein YP_637845.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate YP_637846.1 TIGRFAM: Excisionase/Xis, DNA-binding; KEGG: mpa:MAP3992 hypothetical protein YP_637847.1 PFAM: Protein of unknown function DUF1713; KEGG: cdi:DIP0396 hypothetical protein YP_637848.1 PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase Male sterility-like; KEGG: mpa:MAP3993 UDP-glucose 4-epimerase YP_637849.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mpa:MAP3994 hypothetical protein YP_637850.1 PFAM: MaoC-like dehydratase; KEGG: mpa:MAP3996c hypothetical protein YP_637851.1 TIGRFAM: HAD-superfamily hydrolase subfamily IB, PSPase-like HAD-superfamily subfamily IB, PSPase-like; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: mpa:MAP3997c phosphoserine phosphatase YP_637852.1 PFAM: glutaredoxin 2; KEGG: mpa:MAP4001 hypothetical protein YP_637853.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins YP_637854.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis YP_637855.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase Uroporphyrinogen III synthase HEM4; KEGG: mpa:MAP4004 uroporphyrin-III C-methyltransferase / uroporphyrinogen-III synthase YP_637856.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_637859.1 KEGG: mbo:Mb0526 possible conserved transmembrane protein YP_637860.1 KEGG: mbo:Mb0527 possible transmembrane protein YP_637862.1 KEGG: nfa:nfa43550 hypothetical protein YP_637863.1 PFAM: regulatory protein, TetR; KEGG: sco:SCO6792 TetR-family transcriptional regulator YP_637864.1 KEGG: mpa:MAP2011 hypothetical protein YP_637866.1 KEGG: sma:SAV1469 hypothetical protein YP_637867.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_637868.1 PFAM: Phosphoglycerate mutase; KEGG: mpa:MAP4021 hypothetical protein YP_637869.1 PFAM: Redoxin; KEGG: mbo:Mb0539 possible thioredoxin protein (thiol-disulfide interchange protein) YP_637870.1 PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: mpa:MAP4023 cytochrome c-type biogenesis protein YP_637871.1 PFAM: ResB-like; KEGG: mbo:Mb0541 probable conserved transmembrane protein YP_637872.1 PFAM: cytochrome c assembly protein; KEGG: mpa:MAP4025 CcsB YP_637873.1 KEGG: mpa:MAP4026 hypothetical protein YP_637874.1 KEGG: mbo:Mb0544 possible conserved membrane protein YP_637875.1 PFAM: aminotransferase, class V; KEGG: tfu:Tfu_0028 hypothetical protein YP_637876.1 PFAM: protein of unknown function DUF1486 YP_637877.1 KEGG: nfa:nfa51500 hypothetical protein YP_637878.1 PFAM: Clp, N terminal; KEGG: nfa:nfa51490 putative Clp protease subunit YP_637879.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate YP_637880.1 Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate YP_637881.1 PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase dTDP-4-dehydrorhamnose reductase; KEGG: mbo:Mb0550 probable UDP-glucose 4-epimerase GalE3 (galactowaldenase) (UDP-galactose 4-epimerase) (uridine diphosphate galactose 4-epimerase) (uridine diphospho-galactose 4-epimerase) YP_637882.1 KEGG: mtu:Rv2307c hypothetical protein Rv2307c YP_637883.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: bja:bll2937 hypothetical protein YP_637884.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase FAD dependent oxidoreductase; KEGG: mpa:MAP1561c NADH dehydrogenase YP_637885.1 PFAM: ATP-binding region, ATPase-like histidine kinase A-like; KEGG: sco:SCO3740 histidine kinase YP_637886.1 PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: sco:SCO3741 putative response regulator YP_637887.1 PFAM: glycosyl transferase, family 2; KEGG: mpa:MAP4035 glycosyl transferase YP_637888.1 KEGG: mpa:MAP4036 hypothetical protein YP_637889.1 PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: fra:Francci3_0981 conserved hypothetical protein YP_637890.1 PFAM: oxidoreductase, molybdopterin binding; KEGG: mtc:MT0228 hypothetical protein YP_637891.1 KEGG: mbo:Mb0555c probable conserved integral membrane protein YP_637892.1 PFAM: formate/nitrite transporter; KEGG: tbd:Tbd_1943 putativel formate transporter YP_637893.1 catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide YP_637894.1 TIGRFAM: Oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase molydopterin dinucleotide-binding region; KEGG: mbo:Mb2924c possible formate dehydrogenase H FdhF (formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide) (formate dehydrogenase-H alpha subunit) (FDH-H) YP_637895.1 PFAM: UspA; KEGG: mbo:Mb2656 hypothetical protein YP_637896.1 PFAM: protein of unknown function DUF1330; KEGG: nfa:nfa37430 hypothetical protein YP_637897.1 KEGG: nfa:nfa31500 hypothetical protein YP_637898.1 KEGG: nfa:nfa31490 hypothetical protein YP_637899.1 KEGG: nfa:nfa31480 hypothetical protein YP_637900.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: nfa:nfa3030 hypothetical protein YP_637901.1 KEGG: nfa:nfa35360 hypothetical protein YP_637902.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP4038c O-succinylbenzoic acid--CoA ligase YP_637903.1 KEGG: mpa:MAP4039c hypothetical protein YP_637904.1 PFAM: phosphate transporter; KEGG: cef:CE0474 putative phosphate transport protein PitA YP_637905.1 KEGG: cef:CE0473 hypothetical protein YP_637906.1 KEGG: nfa:nfa52490 hypothetical protein YP_637907.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpa:MAP4042c hypothetical protein YP_637908.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP4043c possible oxidoreductase YP_637909.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa43560 putative transcriptional regulator YP_637910.1 KEGG: nfa:nfa29690 hypothetical protein YP_637911.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA YP_637912.1 TIGRFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mpa:MAP0168c hypothetical protein YP_637913.1 TIGRFAM: HAD-superfamily hydrolase subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: nfa:nfa35950 putative hydrolase YP_637914.1 PFAM: sigma-70 region 2 Sigma-70, region 4 type 2; KEGG: nfa:nfa18820 putative sigma factor YP_637915.1 activates fatty acids by binding to coenzyme A YP_637916.1 KEGG: xcv:XCV0171 hypothetical protein YP_637917.1 PFAM: DGPFAETKE; KEGG: nfa:nfa18810 hypothetical protein YP_637918.1 PFAM: Amidohydrolase 3; KEGG: mpa:MAP4049 hypothetical protein YP_637919.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP2747 hypothetical protein YP_637920.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate YP_637921.1 KEGG: nfa:nfa29670 hypothetical protein YP_637922.1 PFAM: regulatory protein, TetR; KEGG: sco:SCO6792 TetR-family transcriptional regulator YP_637923.1 PFAM: helix-turn-helix, AraC type ThiJ/PfpI; KEGG: mpa:MAP1652c hypothetical protein YP_637924.1 PFAM: ThiJ/PfpI; KEGG: mpa:MAP1651c hypothetical protein YP_637925.1 PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: sco:SCO0775 hypothetical protein YP_637926.1 PFAM: alpha/beta hydrolase fold; KEGG: mbo:Mb0569 possible peroxidase BpoC (non-haem peroxidase) YP_637927.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis YP_637928.1 KEGG: mtu:Rv0556 probable conserved transmembrane protein YP_637929.1 KEGG: nfa:nfa41090 hypothetical protein YP_637930.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: nfa:nfa41080 putative dehydrogenase YP_637931.1 KEGG: nfa:nfa44510 hypothetical protein YP_637932.1 PFAM: peptidase M14, carboxypeptidase A; KEGG: mba:Mbar_A2914 carboxypeptidase A YP_637933.1 KEGG: sma:SAV926 putative transcriptional activator SRCAP homolog YP_637937.1 PFAM: glycosyl transferase, group 1; KEGG: mpa:MAP4054 hypothetical protein YP_637938.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mlr1595 short chain dehydrogenase YP_637939.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone YP_637940.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: amine oxidase; KEGG: nfa:nfa3040 putative oxidoreductase YP_637941.1 PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: eca:ECA0327 hypothetical protein YP_637942.1 KEGG: cgb:cg0333 possible membrane protein YP_637943.1 PFAM: protein of unknown function UPF0126; KEGG: sco:SCO4104 putative integral membrane protein YP_637944.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: reu:Reut_A3205 phospholipase D/Transphosphatidylase YP_637946.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase Lycopene beta and epsilon cyclase FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpa:MAP4057c hypothetical protein YP_637947.1 PFAM: Polyprenyl synthetase; KEGG: mpa:MAP4058 probable heptaprenyl diphosphate synthase component II YP_637948.1 putative metalloprotease YP_637949.1 KEGG: mpa:MAP0283c hypothetical protein YP_637950.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_637951.1 PFAM: protein of unknown function DUF1023; KEGG: mbo:Mb2105 hypothetical protein YP_637952.1 KEGG: mtc:MT2141 hypothetical protein YP_637953.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription YP_637955.1 PFAM: PKD; KEGG: gvi:gll0556 unknown protein YP_637956.1 PFAM: regulatory protein, LuxR; KEGG: sma:SAV2033 putative LuxR-family transcriptional regulator YP_637957.1 PFAM: regulatory protein, MarR; KEGG: nfa:nfa2240 putative transcriptional regulator YP_637958.1 PFAM: protein kinase extracellular solute-binding protein, family 3; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: mpa:MAP1049c PknE YP_637959.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP YP_637960.1 KEGG: nph:NP5282A hypothetical protein YP_637961.1 PFAM: cytochrome P450; KEGG: mbo:Mb0583 possible cytochrome P450 135B1 CYP135B1 YP_637962.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase Methyltransferase type 11 Methyltransferase type 12; KEGG: mpa:MAP3963 cyclopropane-fatty-acyl-phospholipid synthase YP_637963.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; KEGG: mpa:MAP0135 cyclopropane-fatty-acyl-phospholipid synthase YP_637964.1 PFAM: alanine dehydrogenase/PNT-like; KEGG: ppr:PBPRB1416 hypothetical protein YP_637965.1 PFAM: glycosyl transferase, group 1; KEGG: sth:STH1119 glycosyltransferase, group I YP_637967.1 KEGG: mpa:MAP0102 hypothetical protein YP_637968.1 PFAM: protein of unknown function UPF0089; KEGG: mpa:MAP1969c hypothetical protein YP_637969.1 PFAM: protein kinase; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: mpa:MAP1332 serine/threonine protein kinase YP_637970.1 PFAM: alpha/beta hydrolase fold; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mbo:Mb1935c probable lignin peroxidase LipJ YP_637971.1 PFAM: protein of unknown function DUF344; KEGG: cef:CE2558 hypothetical protein YP_637972.1 KEGG: mbo:Mb0595c hypothetical protein YP_637973.1 KEGG: nfa:nfa30280 hypothetical protein YP_637976.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP2581c hypothetical protein YP_637978.1 KEGG: psb:Psyr_2598 conserved hypothetical protein, putative DNA helicase YP_637980.1 KEGG: tfu:Tfu_1125 hypothetical protein YP_637981.1 PFAM: helicase-like DEAD/DEAH box helicase-like; KEGG: tfu:Tfu_1124 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal YP_637984.1 PFAM: protein of unknown function DUF262; KEGG: tfu:Tfu_0065 similar to uncharacterized conserved protein YP_637985.1 PFAM: UvrD/REP helicase; KEGG: tfu:Tfu_0064 putative DNA helicase YP_637986.1 PFAM: SNF2-related helicase-like; SMART: DEAD/DEAH box helicase-like; KEGG: fra:Francci3_2729 helicase-like YP_637987.1 KEGG: fra:Francci3_2728 conserved hypothetical protein YP_637988.1 PFAM: helicase-like; KEGG: fra:Francci3_2676 helicase-like YP_637989.1 KEGG: fra:Francci3_2675 conserved hypothetical protein YP_637990.1 KEGG: bps:BPSL0767 putative phospholipase protein YP_637992.1 KEGG: nfa:nfa2340 putative DNA cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase YP_637993.1 PFAM: DNA mismatch endonuclease vsr; KEGG: nfa:nfa2330 putative DNA mismatch endonuclease YP_637994.1 KEGG: bja:bll0881 hypothetical protein YP_637996.1 KEGG: ade:Adeh_3866 hypothetical protein YP_637997.1 KEGG: sru:SRU_1101 hypothetical protein YP_637998.1 KEGG: mpa:MAP0027 hypothetical protein YP_637999.1 PFAM: PilT protein-like; KEGG: fra:Francci3_3292 PilT protein-like YP_638000.1 KEGG: sma:SAV457 hypothetical protein YP_638001.1 KEGG: mca:MCA0729 hypothetical protein YP_638002.1 McrC protein together with McrB forms the McrBC restriction system; recognizes N4- and C5-methylcytosine (and 5-hydroxy-methylcytosines); appears to act against 5-methylcytosine preceded by a purine residue; MrcC modulates the specificty of McrB and has DNA cleavage activity YP_638003.1 PFAM: ATPase associated with various cellular activities, AAA_5; SMART: ATPase; KEGG: eba:ebA6589 AAA ATPase superfamily protein, fragment YP_638005.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: nfa:nfa17820 putative ribosylglycohydrolase YP_638006.1 PFAM: NUDIX hydrolase; KEGG: hch:HCH_06996 ADP-ribose pyrophosphatase YP_638007.1 PFAM: regulatory protein, TetR; KEGG: sco:SCO4303 transcriptional regulator YP_638008.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pfo:Pfl_1753 short-chain dehydrogenase/reductase SDR YP_638009.1 PFAM: Death-on-curing protein; KEGG: mpa:MAP3144c hypothetical protein YP_638010.1 PFAM: transposase, mutator type; KEGG: mbo:Mb3142 probable transposase YP_638013.1 PFAM: transposase, mutator type; KEGG: sco:SCP1.259 putative transposon transposase YP_638016.1 KEGG: lxx:Lxx24060 phage-related major capsid protein YP_638017.1 PFAM: transposase IS3/IS911; KEGG: mag:amb0914 transposase and inactivated derivative YP_638019.1 PFAM: MscS Mechanosensitive ion channel; KEGG: cdi:DIP1799 putative mechanosensitive ion channel protein YP_638021.1 KEGG: ddi:DDB0219802 hypothetical protein YP_638022.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF; KEGG: mtc:MT1261 heat shock protein HtrA YP_638023.1 KEGG: fra:Francci3_2023 conserved hypothetical protein YP_638024.1 KEGG: nfa:nfa16000 hypothetical protein YP_638025.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: cbu:CBU_0636 hypothetical protein YP_638026.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mbo:Mb0561c short chain dehydrogenase YP_638027.1 PFAM: Uncharacterized protein UPF0065; KEGG: bld:BLi01241 putative tricarboxylic transport membrane protein YP_638029.1 PFAM: regulatory protein, TetR; KEGG: blo:BL0448 possible TetR-type transcriptional regulator YP_638030.1 PFAM: protein of unknown function UPF0089; KEGG: mpa:MAP1969c hypothetical protein YP_638031.1 KEGG: sma:SAV5744 hypothetical protein YP_638032.1 KEGG: mbo:Mb2825c hypothetical arginine and alanine rich protein YP_638033.1 SMART: ATPase; KEGG: pgi:PG0062 TPR domain protein YP_638034.1 KEGG: mpa:MAP2067c hypothetical protein YP_638035.1 KEGG: xac:XAC4299 hypothetical protein YP_638036.1 KEGG: xcb:XC_4251 hypothetical protein YP_638037.1 KEGG: xcv:XCV4401 hypothetical protein YP_638038.1 PFAM: Creatininase; KEGG: dar:Daro_0078 creatininase YP_638039.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: ava:Ava_4238 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_638040.1 KEGG: bja:blr4464 probable ABC transporter ATP-binding/permease protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component ABC transporter related; SMART: ATPase YP_638041.1 PFAM: extracellular solute-binding protein, family 3; KEGG: nfa:nfa18890 putative transporter substrate-binding protein YP_638042.1 PFAM: glutamine synthetase, catalytic region; KEGG: dar:Daro_0077 glutamine synthetase, catalytic region YP_638043.1 PFAM: regulatory proteins, AsnC/Lrp; KEGG: pho:PH0140 158aa long hypothetical protein YP_638044.1 PFAM: gamma-glutamyltranspeptidase; KEGG: gka:GK3338 gamma-glutamyltranspeptidase YP_638045.1 PFAM: alpha/beta hydrolase fold; KEGG: sco:SCO0461 hydrolase YP_638046.1 PFAM: regulatory protein, TetR; KEGG: sco:SCO0155 transcriptional regulatory protein YP_638047.1 PFAM: regulatory protein, TetR; KEGG: sco:SCO0155 transcriptional regulatory protein YP_638048.1 PFAM: luciferase-like; KEGG: nfa:nfa22130 putative monooxygenase YP_638049.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR 3-beta hydroxysteroid dehydrogenase/isomerase dTDP-4-dehydrorhamnose reductase NmrA-like Male sterility-like; KEGG: mbo:Mb3752 putative oxidoreductase YP_638050.1 PFAM: protein of unknown function DUF218; KEGG: nfa:nfa38140 hypothetical protein YP_638051.1 KEGG: mtu:Rv0314c possible conserved membrane protein YP_638052.1 KEGG: mma:MM0547 hypothetical protein YP_638054.1 TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; KEGG: sma:SAV1546 hypothetical protein YP_638055.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 1; KEGG: ypm:YP1500 putative exported solute-binding protein YP_638056.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV1395 putative ABC transporter permease protein YP_638057.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV2144 putative transport system integral membrane protein YP_638058.1 PFAM: ABC transporter related TOBE Transport-associated OB; SMART: ATPase; KEGG: sil:SPO0237 SN-glycerol-3-phosphate ABC transporter, ATP-binding protein YP_638059.1 KEGG: bur:Bcep18194_B0145 esterase/lipase/thioesterase YP_638060.1 PFAM: Acyl-CoA dehydrogenase, type 2-like; KEGG: tfu:Tfu_1496 FMNH2-dependent monooxygenase YP_638061.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: nfa:nfa12000 putative acyl-CoA dehydrogenase YP_638062.1 KEGG: nfa:nfa12010 putative alkanesulfonate monooxygenase YP_638063.1 KEGG: nfa:nfa12020 putative monooxygenase YP_638064.1 PFAM: conserved hypothetical protein 374; KEGG: mtu:Rv0585c probable conserved integral membrane protein YP_638065.1 PFAM: sulfatase; KEGG: mbo:Mb3104 possible hydrolase YP_638066.1 PFAM: cyclase/dehydrase; KEGG: mbo:Mb3103 hypothetical protein YP_638067.1 PFAM: regulatory protein, MerR; KEGG: tfu:Tfu_1667 regulatory protein, MerR YP_638068.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS Xanthine/uracil/vitamin C permease sulphate transporter; KEGG: sco:SCO3276 integral membrane transporter YP_638069.1 KEGG: mpa:MAP4091c exodeoxyribonuclease V alpha chain; TIGRFAM: exodeoxyribonuclease V, alpha subunit; SMART: ATPase YP_638070.1 PFAM: protein of unknown function DUF88; KEGG: mpa:MAP4069c hypothetical protein YP_638071.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mpa:MAP3405 hypothetical protein YP_638072.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: mtc:MT0658 exodeoxyribonuclease V, beta subunit YP_638073.1 TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V, RecC subunit; KEGG: mpa:MAP4094c exodeoxyribonuclease V, gamma subunit YP_638074.1 PFAM: metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD region; KEGG: ava:Ava_1993 metal dependent phosphohydrolase, HD region YP_638075.1 PFAM: protein of unknown function DUF894, DitE major facilitator superfamily MFS_1; KEGG: rsp:RSP_3035 putative transporter, major facilitator superfamily (MFS) YP_638076.1 KEGG: ret:RHE_CH04029 probable transcriptional regulator protein, MarR family YP_638077.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: neu:NE2303 uncharacterized NAD(FAD)-dependent dehydrogenase YP_638078.1 PFAM: Mg2+ transporter protein, CorA-like; KEGG: pac:PPA1716 putative magnesium transport protein YP_638079.1 KEGG: mbo:Mb3316c putative protein UsfY YP_638080.1 PFAM: regulatory protein, LuxR metal-dependent phosphohydrolase, HD subdomain; KEGG: mpa:MAP3352c hypothetical protein YP_638081.1 KEGG: mpa:MAP3353c hypothetical protein YP_638082.1 PFAM: regulatory protein, TetR; KEGG: sma:SAV146 putative TetR-family transcriptional regulator YP_638083.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_638084.1 PFAM: metal-dependent phosphohydrolase, HD subdomain; KEGG: nfa:nfa27960 hypothetical protein YP_638085.1 PFAM: beta-lactamase-like; KEGG: mpa:MAP4104c hypothetical protein YP_638086.1 PFAM: protein of unknown function UPF0074; KEGG: nfa:nfa36860 putative transcriptional regulator YP_638087.1 PFAM: globin oxidoreductase FAD/NAD(P)-binding Oxidoreductase FAD-binding region; KEGG: nfa:nfa36850 putative flavohemoprotein YP_638088.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif YP_638089.1 functions as a heterodimer along with HadB in fatty acid biosynthesis; fatty acid synthase type II; FAS-II YP_638090.1 functions as a heterodimer along with HadA or HadC in fatty acid biosynthesis; fatty acid synthase type II; FAS-II YP_638091.1 functions as a heterodimer along with HadB in fatty acid biosynthesis; fatty acid synthase type II; FAS-II YP_638092.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force YP_638093.1 Modulates Rho-dependent transcription termination YP_638094.1 binds directly to 23S ribosomal RNA YP_638095.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_638097.1 KEGG: tcr:510275.60 mucin-associated surface protein (MASP) Pfam: Mucin PROSITE: GLN_RICH YP_638098.1 KEGG: mpa:MAP4113 50S ribosomal protein L1 YP_638099.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: nfa:nfa44940 hypothetical protein YP_638100.1 PFAM: transposase IS3/IS911; KEGG: mbo:Mb2839c probable transposase YP_638101.1 PFAM: Integrase, catalytic region; KEGG: mbo:Mb2838c probable transposase YP_638102.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: nfa:nfa54240 putative UDP-glucose 6-dehydrogenase YP_638103.1 SMART: Low molecular weight phosphotyrosine protein phosphatase; KEGG: nfa:nfa18680 putative protein-tyrosine phosphatase YP_638105.1 PFAM: polysaccharide biosynthesis protein; KEGG: bja:bll3363 hypothetical protein YP_638106.1 KEGG: hch:HCH_03420 hypothetical protein YP_638107.1 KEGG: cef:CE1243 putative transposase YP_638108.1 PFAM: transposase, mutator type; KEGG: sco:SCP1.259 putative transposon transposase YP_638109.1 PFAM: acyltransferase 3; KEGG: tfu:Tfu_1701 hypothetical protein YP_638110.1 PFAM: O-antigen polymerase YP_638111.1 KEGG: mac:MA2174 galactoside O-acetyltransferase YP_638112.1 KEGG: plt:Plut_1851 hypothetical protein YP_638113.1 TIGRFAM: Methyltransferase FkbM; KEGG: noc:Noc_1518 methyltransferase FkbM YP_638114.1 PFAM: glycosyl transferase, group 1; KEGG: noc:Noc_1524 glycosyl transferase, group 1 YP_638115.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mtc:MT1562 fucose synthetase YP_638116.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: mpa:MAP1231 GDP-mannose 4,6-dehydratase YP_638117.1 KEGG: cgb:cg0414 cell surface polysaccharide biosynthesis / chain length determinant protein YP_638118.1 KEGG: fra:Francci3_3471 hypothetical protein YP_638120.1 PFAM: PE-PPE-like; KEGG: mbo:Mb1465 PE family protein YP_638122.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase Methyltransferase type 11 Methyltransferase type 12; KEGG: mpa:MAP4116c cyclopropane-fatty-acyl-phospholipid synthase YP_638123.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase Methyltransferase type 11 Methyltransferase type 12; KEGG: mtc:MT0672 methoxy mycolic acid synthase 2 YP_638124.1 PFAM: alpha/beta hydrolase fold; KEGG: mtc:MT0674 carboxyl esterase YP_638125.1 PFAM: ABC-1; KEGG: mpa:MAP4119c hypothetical protein YP_638126.1 PFAM: acyltransferase 3; KEGG: fra:Francci3_3258 acyltransferase 3 YP_638127.1 KEGG: mpa:MAP3157 hypothetical protein YP_638128.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP3156c hypothetical protein YP_638129.1 PFAM: protein of unknown function DUF664; KEGG: mpa:MAP4120c hypothetical protein YP_638130.1 KEGG: nfa:nfa38130 hypothetical protein YP_638131.1 PFAM: protein of unknown function UPF0074 regulatory protein, DeoR Helix-turn-helix, type 11; KEGG: sma:SAV6536 putative DeoR-family transcriptional regulator YP_638132.1 KEGG: mpa:MAP3237c hypothetical protein YP_638133.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mpa:MAP3240 hypothetical protein YP_638134.1 PFAM: glycoside hydrolase, family 38 glycosyl hydrolases 38-like; KEGG: mpa:MAP4121 hypothetical protein YP_638135.1 KEGG: mpa:MAP4122 FabD2 YP_638136.1 PFAM: ROK; KEGG: mbo:Mb0669 possible sugar kinase YP_638137.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_638138.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_638139.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: mbo:Mb0674 possible ribonucleotide-transport ATP-binding protein ABC transporter MKL YP_638140.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_638141.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_638142.1 KEGG: mtc:MT2308 hypothetical protein YP_638143.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues YP_638144.1 PFAM: protein of unknown function DUF861, cupin_3; KEGG: sco:SCO6989 hypothetical protein YP_638145.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mbo:Mb0691 probable acyl-CoA dehydrogenase FadE8 YP_638146.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_638147.1 PFAM: PaaX-like PaaX-like-like; KEGG: mpa:MAP4135 hypothetical protein YP_638148.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_638149.1 KEGG: mpa:MAP4137c hypothetical protein YP_638150.1 KEGG: mbo:Mb0699c probable conserved transmembrane protein YP_638151.1 KEGG: nfa:nfa50790 hypothetical protein YP_638152.1 KEGG: mtc:MT1312 hypothetical protein YP_638153.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP4139 hypothetical protein YP_638154.2 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_638155.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_638156.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_638157.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_638158.1 PFAM: cutinase; KEGG: mpa:MAP2020 hypothetical protein YP_638159.1 KEGG: mpa:MAP4145 hypothetical protein YP_638160.1 PFAM: UspA; KEGG: fra:Francci3_2760 UspA YP_638161.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_638162.1 TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mpa:MAP2094c putative ornithine aminotransferase YP_638163.1 PFAM: amidinotransferase; KEGG: mbo:Mb2350c hypothetical protein YP_638164.1 PFAM: regulatory proteins, AsnC/Lrp; KEGG: mpa:MAP2096 hypothetical protein YP_638165.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpa:MAP4147 hypothetical protein YP_638166.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpb:RPB_4261 glyoxalase/bleomycin resistance protein/dioxygenase YP_638167.1 PFAM: sigma-70 region 2 sigma-70 region 4 Sigma-70, region 4 type 2; KEGG: sma:SAV4735 putative RNA polymerase ECF-subfamily sigma factor YP_638168.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP4151c hypothetical protein YP_638169.1 KEGG: mtc:MT0719.1 hypothetical protein YP_638170.1 KEGG: mpa:MAP4152 hypothetical protein YP_638171.1 PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; KEGG: mpa:MAP4153 PqqE YP_638172.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mpa:MAP4154 L-Lactate dehydrogenase (cytochrome) YP_638173.1 PFAM: Creatininase; KEGG: mpa:MAP4155 hypothetical protein YP_638174.1 PFAM: glycosyl transferase, family 2; KEGG: mbo:Mb0715 probable membrane sugar transferase YP_638175.1 PFAM: glucose-methanol-choline oxidoreductase GMC oxidoreductase; KEGG: mpa:MAP4158 hypothetical protein YP_638176.1 PFAM: Asp/Glu racemase; KEGG: bur:Bcep18194_A5279 Asp/Glu racemase YP_638177.1 PFAM: major facilitator superfamily MFS_1; KEGG: nfa:pnf2330 putative transporter YP_638178.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP4159 hypothetical protein YP_638179.1 PFAM: cytochrome P450; KEGG: mpa:MAP2371c hypothetical protein YP_638180.1 PFAM: cytochrome P450; KEGG: mpa:MAP2371c hypothetical protein YP_638181.1 PFAM: Carboxylesterase, type B; KEGG: sma:SAV433 putative carboxylesterase YP_638182.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_638183.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_638184.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_638185.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_638186.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_638187.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_638188.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_638189.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation YP_638190.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_638191.1 one of the stabilizing components for the large ribosomal subunit YP_638192.1 PFAM: ribosomal protein S17; KEGG: mbo:Mb0730 probable 30S ribosomal protein S17 RpsQ YP_638193.1 PFAM: sulfatase; KEGG: mpa:MAP4171 AtsA YP_638194.1 PFAM: protein of unknown function DUF323; KEGG: mpa:MAP4174 hypothetical protein YP_638195.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_638196.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_638197.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_638198.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif YP_638199.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_638200.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_638201.1 binds 5S rRNA along with protein L5 and L25 YP_638202.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_638203.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_638204.1 late assembly protein YP_638205.1 PFAM: transposase, mutator type; KEGG: mbo:Mb3142 probable transposase YP_638206.1 KEGG: mpa:MAP4270 hypothetical protein YP_638208.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: atc:AGR_L_595 hypothetical protein YP_638209.1 PFAM: helix-turn-helix, AraC type; KEGG: ret:RHE_PF00467 probable transcriptional regulator protein, AraC family YP_638210.1 PFAM: HNH endonuclease protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mbo:Mb2126 hypothetical protein YP_638211.1 PFAM: luciferase-like; KEGG: mpa:MAP4187c hypothetical protein YP_638212.1 TIGRFAM: signal peptide peptidase SppA, 67K type signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: mbo:Mb0745 possible protease IV SppA (endopeptidase IV) (signal peptide peptidase) YP_638213.1 TIGRFAM: Protein of unknown function Mtu_121; PFAM: O-methyltransferase-like; KEGG: mpa:MAP4189c hypothetical protein YP_638214.1 TIGRFAM: Protein of unknown function Mtu_121; PFAM: O-methyltransferase-like; KEGG: mpa:MAP4197c hypothetical protein YP_638215.1 TIGRFAM: Protein of unknown function Mtu_121; PFAM: O-methyltransferase-like; KEGG: mpa:MAP4191c hypothetical protein YP_638216.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_638217.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_638218.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn YP_638219.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. tuberculosis this protein regulates polyketide synthases and secreted or membrane proteins YP_638220.1 KEGG: mpa:MAP4202 hypothetical protein YP_638221.1 PFAM: regulatory protein, MarR; KEGG: mpa:MAP4212 hypothetical protein YP_638222.1 PFAM: Integrase, catalytic region; KEGG: cjk:jk1405 transposase for Tn3599 YP_638223.1 PFAM: NmrA-like; KEGG: gga:416672 similar to HSCARG protein YP_638224.1 PFAM: regulatory protein, MarR; KEGG: nfa:nfa12670 putative transcriptional regulator YP_638225.1 PFAM: GAF ATP-binding region, ATPase-like histidine kinase, dimerisation and phosphoacceptor region; KEGG: psp:PSPPH_1907 sensor histidine kinase YP_638226.1 PFAM: regulatory protein, LuxR response regulator receiver; KEGG: tfu:Tfu_2491 regulatory protein, LuxR:response regulator receiver YP_638227.1 PFAM: Haloacid dehalogenase-like hydrolase; KEGG: rpb:RPB_4341 HAD-superfamily hydrolase subfamily IA, variant 3 YP_638228.1 PFAM: regulatory protein, TetR; KEGG: sma:SAV913 putative TetR-family transcriptional regulator YP_638229.1 PFAM: chalcone and stilbene synthases-like Chalcone and stilbene synthases-like 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; KEGG: mpa:MAP1369 chalcone synthase YP_638230.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: sco:SCO7670 hypothetical protein YP_638231.1 PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: sco:SCO7669 oxidoreductase YP_638232.1 TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase NADP oxidoreductase, coenzyme F420-dependent 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mpa:MAP4213c 3-hydroxyisobutyrate dehydrogenase YP_638233.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP4214c acyl-CoA dehydrogenase YP_638234.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: mpa:MAP4215c methylmalonate-semialdehyde dehydrogenase YP_638235.1 KEGG: mpa:MAP4224c dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related YP_638236.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase polysaccharide biosynthesis protein CapD dTDP-4-dehydrorhamnose reductase Male sterility-like; KEGG: mpa:MAP4225c dTDP-glucose-4,6-dehydratase YP_638237.1 KEGG: mpa:MAP4227c hypothetical protein YP_638238.1 KEGG: mpa:MAP4227c hypothetical protein YP_638239.1 PFAM: cyclic nucleotide-binding ATP-binding region, ATPase-like; KEGG: nfa:nfa52860 putative two-component system sensor kinase YP_638240.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase response regulator receiver HI0933-like protein FAD dependent oxidoreductase; KEGG: sco:SCO7298 thioredoxin reductase YP_638241.1 KEGG: cgb:cg2606 hypothetical protein YP_638242.1 PFAM: UspA; KEGG: nfa:nfa35690 hypothetical protein YP_638243.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: sco:SCO0179 putative zinc-containing dehydrogenase YP_638244.1 KEGG: mtc:MT2060 conserved hypothetical protein YP_638245.1 KEGG: mbo:Mb2058 conserved hypothetical protein Acg YP_638246.1 PFAM: regulatory protein, LuxR response regulator receiver Sigma-70, region 4 type 2; KEGG: mbo:Mb3157c two component transcriptional regulatory protein DevR (probably luxR/uhpA-family) YP_638247.1 PFAM: GAF ATP-binding region, ATPase-like histidine kinase, dimerisation and phosphoacceptor region; KEGG: mbo:Mb2052c histidine kinase response regulator YP_638248.1 KEGG: mpa:MAP1746c hypothetical protein YP_638249.1 TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase Heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase E1-E2 ATPase-associated region Hemerythrin HHE cation binding region; KEGG: sco:SCO0164 putative cation-transporting ATPase YP_638250.1 KEGG: pac:PPA1037 hypothetical protein YP_638251.1 PFAM: phosphoribosyltransferase Erythromycin esterase; KEGG: mtc:MT2089 hypothetical protein YP_638252.1 KEGG: pac:PPA1037 hypothetical protein YP_638253.1 KEGG: mpa:MAP3272 hypothetical protein YP_638254.1 KEGG: mbo:Mb0584 hypothetical protein YP_638255.1 TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit ATP-cone Ribonucleotide reductase large subunit, N terminal; KEGG: mtu:Rv0570 ribonucleoside-diphosphate reductase alpha chain YP_638256.1 KEGG: sco:SCO1149 hypothetical protein YP_638257.1 PFAM: UspA; KEGG: mbo:Mb2657c hypothetical protein YP_638258.1 KEGG: nfa:nfa27990 hypothetical protein YP_638260.1 PFAM: dehydrogenase, E1 component; KEGG: bte:BTH_II0928 probable pyruvate dehydrogenase, E1 component, alpha subunit YP_638261.1 PFAM: Transketolase, central region Transketolase-like; KEGG: bte:BTH_II0929 pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase beta subunit YP_638262.1 PFAM: biotin/lipoyl attachment catalytic domain of components of various dehydrogenase complexes E3 binding; KEGG: bte:BTH_II0930 probable pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase YP_638263.1 PFAM: phosphopantetheine-binding; KEGG: dar:Daro_2709 phosphopantetheine-binding YP_638264.1 KEGG: mbo:Mb0082 hypothetical protein YP_638265.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mpa:MAP1571 alcohol dehydrogenase YP_638266.1 PFAM: UspA; KEGG: mbo:Mb2051c hypothetical protein YP_638268.1 PFAM: CBS protein of unknown function DUF21 transporter-associated region; KEGG: tfu:Tfu_1263 CBS YP_638269.1 KEGG: sme:SMc04299 hypothetical protein; TIGRFAM: HAD-superfamily hydrolase subfamily IIB; PFAM: Haloacid dehalogenase-like hydrolase sucrose-6F-phosphate phosphohydrolase Haloacid dehalogenase-like hydrolase, type 3; SMART: ATPase YP_638270.1 TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: cation transporting ATPase-like Haloacid dehalogenase-like hydrolase E1-E2 ATPase-associated region; KEGG: mbo:Mb2020 probable metal cation transporter P-type ATPase A CtpF YP_638271.1 PFAM: UspA; KEGG: mpa:MAP1741c hypothetical protein YP_638272.1 PFAM: CBS MgtE integral membrane region; KEGG: mth:MTH620 Mg2+ transporter YP_638273.1 PFAM: UspA; KEGG: mpa:MAP1741c hypothetical protein YP_638274.1 PFAM: UspA; KEGG: mbo:Mb2657c hypothetical protein YP_638275.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nfa:nfa37770 hypothetical protein YP_638276.1 KEGG: mpa:MAP1746c hypothetical protein YP_638277.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_638278.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_638279.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_638280.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_638281.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_638282.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_638283.1 is a component of the macrolide binding site in the peptidyl transferase center YP_638284.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_638285.1 PFAM: cutinase; KEGG: mpa:MAP1662c serine esterase, cutinase family YP_638286.1 PFAM: cutinase; KEGG: mpa:MAP3428c hypothetical protein YP_638287.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: nfa:nfa8430 hypothetical protein YP_638288.1 PFAM: protein of unknown function DUF1470; KEGG: sma:SAV6809 hypothetical protein YP_638289.1 PFAM: Integrase, catalytic region; KEGG: cjk:jk1405 transposase for Tn3599 YP_638290.1 PFAM: transposase IS116/IS110/IS902; KEGG: sbo:SBO_P096 putative transposase YP_638291.1 TIGRFAM: GGDEF domain; PFAM: GGDEF; KEGG: tbd:Tbd_2814 putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain YP_638292.1 PFAM: protein of unknown function DUF690; KEGG: mtc:MT3556 hypothetical protein YP_638293.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: mpa:MAP4239c robable secreted serine protease YP_638294.1 KEGG: mpa:MAP4240c hypothetical protein YP_638295.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase; KEGG: mtu:Rv3447c probable conserved membrane protein YP_638296.1 KEGG: mbo:Mb3476c hypothetical alanine and valine rich protein YP_638297.1 KEGG: mpa:MAP4243 hypothetical protein YP_638298.1 KEGG: mbo:Mb3474c hypothetical protein YP_638299.2 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_638300.1 forms a direct contact with the tRNA during translation YP_638303.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate YP_638304.1 KEGG: mbo:Mb3470c hypothetical protein YP_638305.1 KEGG: mbo:Mb3469c conserved hypothetical alanine and proline rich protein YP_638306.1 PFAM: luciferase-like; KEGG: mpa:MAP4250c hypothetical protein YP_638307.1 KEGG: mbo:Mb3468 hypothetical protein YP_638308.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source YP_638309.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: rso:RSc0992 probable glutathione S-transferase-related transmembrane protein YP_638310.1 PFAM: regulatory protein, ArsR; KEGG: bur:Bcep18194_B2009 transcriptional regulator, ArsR family YP_638311.1 PFAM: protein of unknown function DUF899, thioredoxin-like; KEGG: bbr:BB1057 hypothetical protein YP_638313.1 PFAM: protein of unknown function UPF0031 YjeF-related protein-like; KEGG: mpa:MAP4256 hypothetical protein YP_638314.1 KEGG: mbo:Mb3462c probable glutamate decarboxylase GADB; TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase YP_638315.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer YP_638316.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP4259 hypothetical protein YP_638317.1 PFAM: protein of unknown function UPF0079; KEGG: mbo:Mb3456c hypothetical protein YP_638318.1 PFAM: peptidase M22, glycoprotease; KEGG: mpa:MAP4261 hypothetical protein YP_638319.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: mpa:MAP4262 ribosomal-protein-alanine N-acetyltransferase YP_638320.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_638321.1 KEGG: bur:Bcep18194_B0390 hypothetical protein YP_638322.1 PFAM: chaperonin Cpn10; KEGG: mpa:MAP4264 10 kD chaperone YP_638323.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth YP_638324.1 PFAM: regulatory protein, MarR; KEGG: nfa:nfa43350 putative transcriptional regulator YP_638326.1 PFAM: Lipocalin-like; KEGG: mlo:mlr5751 outer membrane lipoprotein YP_638327.1 KEGG: rba:RB11231 hypothetical protein YP_638328.1 KEGG: ade:Adeh_0447 hypothetical protein YP_638329.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive YP_638330.1 PFAM: transcription factor WhiB; KEGG: mpa:MAP4273c WhiB3 YP_638331.1 KEGG: mbo:Mb3449c hypothetical protein YP_638332.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this protein is involved in expression of ribosome-associated gene products in stationary phase YP_638333.1 KEGG: mbo:Mb3447c hypothetical alanine and proline rich protein YP_638334.1 KEGG: mle:ML0386 hypothetical protein YP_638335.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate YP_638336.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate YP_638337.1 KEGG: mtc:MT2308 hypothetical protein YP_638338.1 PFAM: glucose-methanol-choline oxidoreductase FAD dependent oxidoreductase; KEGG: mbo:Mb3443c probable cholesterol oxidase precursor ChoD (cholesterol-O2 oxidoreductase) YP_638339.1 PFAM: glycoside hydrolase, family 65-like glycoside hydrolase family 65, central catalytic glycoside hydrolase family 65-like; KEGG: mtc:MT3509 putative trehalose/maltose hydrolase YP_638340.1 TIGRFAM: HAD-superfamily hydrolase subfamily IA, variant 3 Beta-phosphoglucomutase hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: mpa:MAP3491 hypothetical protein YP_638341.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_638342.1 KEGG: mpa:MAP3488c hypothetical protein YP_638343.1 KEGG: mbo:Mb3426c hypothetical protein YP_638344.1 PFAM: regulatory protein, MarR transcriptional regulator TrmB; KEGG: nfa:nfa44020 putative transcriptional regulator YP_638345.1 PFAM: OsmC-like protein; KEGG: cef:CE2908 putative organic hydroperoxide resistance protein YP_638346.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: mpa:MAP3484 inosine-uridine preferring nucleoside hydrolase YP_638347.1 PFAM: regulatory protein, MarR; KEGG: nfa:nfa10440 putative transcriptional regulator YP_638348.1 PFAM: MaoC-like dehydratase; KEGG: mpa:MAP3479c hypothetical protein YP_638349.1 PFAM: UspA; KEGG: aci:ACIAD1277 hypothetical protein YP_638350.1 KEGG: nph:NP0440A homolog 3 to rad50 ATPase YP_638351.1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase. YP_638352.1 PFAM: nitroreductase; KEGG: mpa:MAP3475c hypothetical protein YP_638353.1 KEGG: rsp:RSP_3746 hypothetical protein YP_638354.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mpa:MAP3474 putative rRNA methylase YP_638355.1 PFAM: HNH endonuclease protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mbo:Mb1794c hypothetical protein YP_638356.1 PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: mpa:MAP3473c hypothetical protein YP_638357.1 PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region; KEGG: mpa:MAP3472c hypothetical protein YP_638358.1 PFAM: Roadblock/LC7; KEGG: mpa:MAP3471c hypothetical protein YP_638359.1 PFAM: protein of unknown function DUF742; KEGG: mpa:MAP3470c hypothetical protein YP_638360.1 PFAM: protein of unknown function, ATP binding; KEGG: mpa:MAP3469c hypothetical protein YP_638361.1 PFAM: pentapeptide repeat; KEGG: mbo:Mb3396c hypothetical protein YP_638363.1 KEGG: mpa:MAP1972c hypothetical protein YP_638365.1 PFAM: transglutaminase-like; KEGG: rba:RB3627 hypothetical protein YP_638366.1 PFAM: PGAP1-like; KEGG: ade:Adeh_0964 PGAP1-like YP_638367.1 KEGG: mbo:Mb3464c possible conserved transmembrane protein YP_638368.1 PFAM: helix-turn-helix, AraC type; KEGG: mpa:MAP3230c hypothetical protein YP_638369.1 PFAM: Forkhead-associated ABC transporter related ABC-2 type transporter; SMART: ATPase; KEGG: mbo:Mb1776 probable conserved transmembrane ATP-binding protein ABC transporter YP_638371.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mpa:MAP3464 hypothetical protein YP_638372.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: mpa:MAP3463c methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase YP_638373.1 KEGG: mpa:MAP3462c hypothetical protein YP_638374.1 PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: mbo:Mb3374 possible methyltransferase (methylase) YP_638375.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine YP_638376.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol YP_638377.1 KEGG: mpa:MAP3456c isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type YP_638378.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP3454 hypothetical protein YP_638379.1 KEGG: nfa:nfa9310 putative exonuclease; TIGRFAM: exodeoxyribonuclease III (xth); PFAM: Endonuclease/exonuclease/phosphatase YP_638380.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_638381.1 TIGRFAM: conserved hypothetical protein; PFAM: ribonuclease BN; KEGG: mpa:MAP3452c hypothetical protein YP_638382.1 PFAM: small multidrug resistance protein; KEGG: mpa:MAP3451 molecular chaperone YP_638383.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mpa:MAP2722c hypothetical protein YP_638384.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: mpa:MAP3448 putative D-alanyl-D-alanine carboxypeptidase YP_638385.1 PFAM: Strictosidine synthase SMP-30/Gluconolaconase/LRE-like region; KEGG: pae:PA1293 hypothetical protein YP_638386.1 PFAM: aminotransferase class-III; KEGG: mtc:MT3432 aminotransferase, class III YP_638387.1 PFAM: regulatory proteins, AsnC/Lrp; KEGG: lxx:Lxx11990 transcriptional regulator, AsnC family YP_638388.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation YP_638390.1 PFAM: acyltransferase 3; KEGG: mbo:Mb1286 probable acyltransferase YP_638391.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_638392.1 KEGG: mbo:Mb3360 probable transposase fusion protein YP_638394.1 PFAM: protein of unknown function UPF0118; KEGG: nfa:nfa43460 hypothetical protein YP_638395.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase YP_638396.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_638397.1 KEGG: mbo:Mb3346 probable succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase) YP_638398.1 PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: mle:ML0699 putative succinate dehydrogenase cytochrome B-556 subunit YP_638399.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis YP_638400.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate YP_638401.1 catalyzes the formation of inosine from adenosine YP_638402.1 KEGG: mbo:Mb3339 hypothetical protein YP_638404.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mle:ML2341 possible regulatory protein YP_638405.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase Tetratricopeptide TPR_4; KEGG: neu:NE0090 guanylate cyclase:TPR repeat:SAM domain (sterile alpha motif) YP_638406.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mle:ML2341 possible regulatory protein YP_638407.1 PFAM: NLP/P60; KEGG: nfa:nfa9570 putative hydrolase YP_638408.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate YP_638409.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: mtc:MT3407 phosphomannomutase YP_638410.1 PFAM: regulatory protein, MarR; KEGG: sco:SCO7639 MarR-family regulatory protein YP_638411.1 PFAM: putative ammonia monooxygenase; KEGG: ssn:SSO_0666 putative transport protein YP_638412.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation YP_638413.1 TIGRFAM: Peptidase M20D, amidohydrolase; PFAM: peptidase M20 peptidase dimerisation; KEGG: mbo:Mb3334c probable amidase AmiB1 (aminohydrolase) YP_638414.1 KEGG: mbo:Mb3333c possible N-acyl-L-amino acid amidohydrolase AmiA1 (N-acyl-L-amino acid amidase); TIGRFAM: Peptidase M20D, amidohydrolase; PFAM: peptidase M20 YP_638415.1 KEGG: ade:Adeh_2160 hypothetical protein YP_638416.1 KEGG: mtc:MT3403 hypothetical protein YP_638417.1 catalyzes the reduction of nonspecific electron acceptors such as 2,6-dimethyl-1,4-benzoquinone and 5-hydroxy-1,4-naphthaquinone; does not have lipoamide dehydrogenase activity YP_638418.1 PFAM: FAD dependent oxidoreductase; KEGG: mbo:Mb3330c probable glycerol-3-phosphate dehydrogenase GlpD2 YP_638419.1 PFAM: pseudouridine synthase; KEGG: mpa:MAP3422c hypothetical protein YP_638420.1 KEGG: ddi:DDB0217005 hypothetical protein YP_638421.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa27710 putative short chain dehydrogenase YP_638422.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mbo:Mb1507 enoyl-CoA hydratase YP_638423.1 PFAM: Integrase, catalytic region; KEGG: mpa:MAP1048c hypothetical protein YP_638425.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP3544c hypothetical protein YP_638426.1 PFAM: ferredoxin oxidoreductase FAD/NAD(P)-binding Oxidoreductase FAD-binding region; KEGG: mpa:MAP3545 hypothetical protein YP_638427.1 PFAM: fatty acid desaturase; KEGG: mpa:MAP3546 DesA3_2 YP_638428.1 TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase, gamma subunit; KEGG: mbo:Mb1765c probable nitrate reductase NarX YP_638429.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase, delta subunit; KEGG: mtc:MT1200 nitrate reductase delta chain YP_638430.1 TIGRFAM: nitrate reductase, beta subunit; KEGG: mbo:Mb1194 probable respiratory nitrate reductase (beta chain) NarH YP_638431.1 TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase molydopterin dinucleotide-binding region; KEGG: mpa:MAP2620c nitrate reductase alpha chain YP_638432.1 PFAM: major facilitator superfamily MFS_1; KEGG: mbo:Mb1766c possible nitrate/nitrite transporter Nark2 YP_638433.1 PFAM: Formamidopyrimidine-DNA glycolase zinc finger, Fpg-type; KEGG: mpa:MAP3416 probable endonuclease VIII YP_638434.1 KEGG: mtc:MT3398 sulfatase family protein YP_638435.1 PFAM: helicase-like DEAD/DEAH box helicase-like DEAD/H associated; KEGG: mtc:MT3395 ATP-dependent helicase, putative YP_638436.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa10190 putative short chain dehydrogenase YP_638437.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: glycosyl transferase, family 28; KEGG: mpa:MAP2851c hypothetical protein YP_638438.1 PFAM: aldehyde dehydrogenase; KEGG: mbo:Mb3321 probable piperideine-6-carboxilic acid dehydrogenase Pcd (piperideine-6-carboxylate dehydrogenase) YP_638439.1 PFAM: regulatory proteins, AsnC/Lrp; KEGG: mpa:MAP3411c leucine-responsive regulatory protein YP_638440.1 catalyzes the formation of 2-aminoadipate 6-semiladehyde and glutamate from lysine and 2-oxoglutarate YP_638441.1 PFAM: restriction endonuclease; KEGG: mpa:MAP0385 hypothetical protein YP_638442.1 KEGG: mpa:MAP3409c hypothetical protein YP_638443.1 KEGG: mbo:Mb3316c putative protein UsfY YP_638444.1 PFAM: CsbD-like; KEGG: mpa:MAP2947 hypothetical protein YP_638445.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ava:Ava_2428 short-chain dehydrogenase/reductase SDR YP_638446.1 PFAM: glycosyl transferase, group 1; KEGG: mpa:MAP3246 hypothetical protein YP_638447.1 KEGG: mpa:MAP3244 hypothetical protein YP_638448.1 KEGG: mpa:MAP3407c RsbW YP_638449.1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is a general stress response regulator; expressed in stationary phase and under nitrogen depletion and cold shock YP_638450.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mpa:MAP3405 hypothetical protein YP_638451.1 KEGG: nfa:nfa52450 hypothetical protein YP_638453.1 KEGG: nfa:nfa9850 hypothetical protein YP_638454.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:blr1251 non-heme haloperoxidase YP_638455.1 KEGG: sma:SAV3023 putative GntR-family transcriptional regulator YP_638457.1 PFAM: biotin/lipoyl attachment ATP-dependent carboxylate-amine ligase-like, ATP-grasp Carbamoyl-phosphate synthase L chain, ATP-binding Carbamoyl-phosphate synthetase large chain-like biotin carboxylase-like; KEGG: mpa:MAP3404 biotin carboxylase YP_638458.1 PFAM: Fe-S metabolism associated SufE; KEGG: mbo:Mb3312 hypothetical protein YP_638459.1 PFAM: Rhodanese-like; KEGG: mpa:MAP3402 thiosulfate sulfurtransferase YP_638460.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell YP_638461.1 KEGG: mle:ML0730 hypothetical protein YP_638462.1 PFAM: carboxyl transferase; KEGG: mpa:MAP3399 propionyl-CoA carboxylase beta chain YP_638463.1 PFAM: sugar transferase; KEGG: mpa:MAP0964c hypothetical protein YP_638464.1 PFAM: membrane-flanked domain; KEGG: mpa:MAP3396c hypothetical protein YP_638465.1 PFAM: GtrA-like protein; KEGG: mtc:MT3377 hypothetical protein YP_638466.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway YP_638467.1 KEGG: nfa:nfa10010 putative phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_638468.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP3392c acyl-CoA dehydrogenase YP_638469.1 PFAM: sugar transferase; KEGG: fra:Francci3_1577 undecaprenyl-phosphate galactosephosphotransferase YP_638470.1 PFAM: amine oxidase; KEGG: psp:PSPPH_0963 hypothetical protein YP_638471.1 PFAM: glycosyl transferase, family 2; KEGG: rba:RB289 dolichol-phosphate mannosyltransferase YP_638472.1 TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase-like biotin/lipoate A/B protein ligase; KEGG: mpa:MAP3397c biotin acetyl-CoA carboxylase ligase YP_638473.1 KEGG: ade:Adeh_2317 hypothetical protein YP_638474.1 PFAM: glycosyl transferase, family 2; KEGG: gka:GK3313 glycosyltransferase YP_638475.1 KEGG: rru:Rru_A3720 polysaccharide biosynthesis protein YP_638477.1 KEGG: bur:Bcep18194_B1815 hypothetical protein YP_638478.1 PFAM: glycosyl transferase, group 1; KEGG: bur:Bcep18194_B1800 glycosyl transferase, group 1 YP_638479.1 PFAM: glycosyl transferase, group 1; KEGG: vvy:VVA0389 glycosyltransferase YP_638480.1 KEGG: bur:Bcep18194_B0792 hypothetical protein YP_638481.1 PFAM: polysaccharide deacetylase; KEGG: rba:RB12602 similar to chitooligosaccharide deacetylase YP_638482.1 KEGG: cdi:DIP1754 hypothetical protein YP_638483.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: cyb:CYB_2112 UDP-N-acetylglucosamine 2-epimerase YP_638485.1 KEGG: mpa:MAP3382 hypothetical protein YP_638486.1 TIGRFAM: cell envelope-related function transcriptional attenuator common domain; PFAM: cell envelope-related transcriptional attenuator; KEGG: mbo:Mb3295 conserved hypothetical protein (CpsA-related protein) YP_638487.1 PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase polysaccharide biosynthesis protein CapD dTDP-4-dehydrorhamnose reductase Male sterility-like; KEGG: mbo:Mb3294c possible dTDP-rhamnose modification protein RmlD YP_638488.1 PFAM: glycosyl transferase, family 2; KEGG: mpa:MAP3379c WbbL YP_638489.1 PFAM: transferase hexapeptide repeat Nucleotidyl transferase; KEGG: mpa:MAP3378c mannose-1-phosphate guanyltransferase YP_638490.1 PFAM: NUDIX hydrolase; KEGG: mpa:MAP3377 hypothetical protein YP_638491.1 catalyzes the addition of gamma linked glutamate to 7,8-didemethyl-8-hydroxy-5-deazariboflavin coenzyme F420-0) YP_638492.1 catalyzes the formation of the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) and GMP from actyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO) YP_638493.1 PFAM: transcription factor WhiB; KEGG: mtc:MT3358 WhiB-related protein YP_638494.1 KEGG: mtc:MT3357 hypothetical protein YP_638495.1 KEGG: mpa:MAP3370c hypothetical protein YP_638496.1 converts mannose-6-phosphate to mannose-1-phosphate; the resulting product is then converted to GDP-mannose by ManC which is then used in the synthesis of mannose-containing glycoconjugates that are important for mediating entry into host cells YP_638497.1 KEGG: mpa:MAP3368c hypothetical protein YP_638498.1 TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase, type I; KEGG: mbo:Mb3283c probable mannose-6-phosphate isomerase ManA (phosphomannose isomerase) (phosphomannoisomerase) (PMI) (phosphohexoisomerase) (phosphohexomutase) YP_638499.1 KEGG: mpa:MAP3366 hypothetical protein YP_638500.1 PFAM: amino acid permease-associated region; KEGG: mbo:Mb3281c possible cationic amino acid transport integral membrane protein YP_638501.1 PFAM: fatty acid desaturase; KEGG: mbo:Mb3280c probable transmembrane alkane 1-monooxygenase AlkB (alkane 1-hydroxylase) (lauric acid omega-hydroxylase) (omega-hydroxylase) (fatty acid omega-hydroxylase) (alkane hydroxylase-rubredoxin) YP_638502.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: mbo:Mb3279c probable rubredoxin RubA YP_638503.1 PFAM: regulatory protein, TetR; KEGG: mtc:MT3347 hypothetical protein YP_638504.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_638505.1 KEGG: sco:SCO4103 peptidase; TIGRFAM: Peptidase M20D, amidohydrolase; PFAM: peptidase M20 peptidase dimerisation YP_638506.1 PFAM: secretory lipase; KEGG: mpa:MAP4289 hypothetical protein YP_638507.1 PFAM: GAF; KEGG: sco:SCO7829 hypothetical protein YP_638508.1 PFAM: TPR repeat Tetratricopeptide TPR_4 Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: cvi:CV0900 hypothetical protein YP_638511.1 KEGG: mpa:MAP1822c hypothetical protein YP_638512.1 KEGG: mbo:Mb3934c putative EsaT-6 like protein 12 (hypothetical alanine rich protein) YP_638513.1 PFAM: protein of unknown function DUF909; KEGG: mpa:MAP4000c hypothetical protein YP_638514.2 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP) YP_638515.1 PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mpa:MAP3360c two-component response regulator YP_638516.1 PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: mbo:Mb3273c two component sensory transduction histidine kinase MtrB YP_638517.1 KEGG: mpa:MAP3358c LpqB YP_638518.1 KEGG: sma:SAV6142 hypothetical protein YP_638519.1 KEGG: mtc:MT3340 hypothetical protein YP_638520.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: mtc:MT3339 S30AE family protein YP_638521.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins YP_638522.1 KEGG: mbo:Mb3263 hypothetical alanine arginine proline rich protein YP_638523.1 PFAM: protein of unknown function UPF0089; KEGG: mbo:Mb3262c hypothetical protein YP_638524.1 TIGRFAM: choline/carnitine/betaine transport; PFAM: BCCT transporter; KEGG: ppu:PP3628 choline/carnitine/betaine transporter family protein YP_638525.1 KEGG: mbo:Mb3260c hypothetical protein YP_638526.1 PFAM: ferredoxin oxidoreductase FAD/NAD(P)-binding Oxidoreductase FAD-binding region; KEGG: mpa:MAP3344c hypothetical protein YP_638527.1 PFAM: fatty acid desaturase; KEGG: mpa:MAP3343c linoleoyl-CoA desaturase, putative YP_638528.1 PFAM: aldo/keto reductase; KEGG: mpa:MAP0907 hypothetical protein YP_638529.1 PFAM: GTPase EngC; KEGG: mpa:MAP3335 hypothetical protein YP_638530.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_638531.1 PFAM: protein of unknown function DUF159; KEGG: mpa:MAP3333c hypothetical protein YP_638532.1 PFAM: methyltransferase small; KEGG: nfa:nfa37740 hypothetical protein YP_638533.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3325 short chain dehydrogenase YP_638534.1 PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: nfa:nfa35200 putative transcriptional regulator YP_638535.1 TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: tfu:Tfu_0874 alpha/beta hydrolase YP_638536.1 KEGG: sma:SAV1700 putative 3-oxoadipate CoA-transferase subunit A; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; PFAM: coenzyme A transferase YP_638537.1 KEGG: sma:SAV1701 putative 3-oxoadipate CoA-transferase subunit B; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; PFAM: coenzyme A transferase YP_638538.1 PFAM: regulatory protein, LuxR Tetratricopeptide TPR_4; KEGG: cef:CE2309 putative transcription regulator YP_638539.1 PFAM: ferredoxin oxidoreductase FAD/NAD(P)-binding short-chain dehydrogenase/reductase SDR Oxidoreductase FAD-binding region GntR-like FAD-binding 9, siderophore-interacting; KEGG: cef:CE2307 putative benzoate 1,2-dioxygenase reductase YP_638540.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: cgb:cg2638 benzoate dioxygenase small subunit YP_638541.1 PFAM: ring hydroxylating dioxygenase, alpha subunit Rieske [2Fe-2S] region; KEGG: cef:CE2305 putative benzoate 1,2-dioxygenase reductase YP_638542.1 PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: nfa:nfa35200 putative transcriptional regulator YP_638543.1 PFAM: Mandelate racemase/muconate lactonizing enzyme-like; KEGG: nfa:nfa35210 putative muconate cycloisomerase YP_638544.1 KEGG: nfa:nfa35220 putative catechol 1,2-dioxygenase; TIGRFAM: Catechol 1,2-dioxygenase, actinobacteria; PFAM: intradiol ring-cleavage dioxygenase Catechol dioxygenase-like YP_638545.1 PFAM: Muconolactone delta-isomerase; KEGG: nfa:nfa35230 putative muconolactone delta-isomerase YP_638546.1 TIGRFAM: conserved hypothetical protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: nfa:nfa45850 hypothetical protein YP_638547.1 PFAM: sigma-70 region 2 sigma-70 region 4 Sigma-70, region 4 type 2; KEGG: mtc:MT3320 RNA polymerase sigma-70 factor, ECF subfamily YP_638548.1 KEGG: mbo:Mb3248c possible anti-sigma factor YP_638549.1 PFAM: biotin/lipoyl attachment; KEGG: mle:ML0802 conserved hypothetical protein YP_638550.1 PFAM: ATP-binding region, ATPase-like histidine kinase, dimerisation/phosphoacceptor PAS fold-4; KEGG: mpa:MAP3321c hypothetical protein YP_638551.1 PFAM: transcription factor WhiB; KEGG: mbo:Mb3245 probable transcriptional regulatory protein WhiB-like WhiB1 YP_638552.1 PFAM: diacylglycerol kinase, catalytic region; KEGG: mbo:Mb3244 hypothetical protein YP_638553.1 KEGG: mbo:Mb3243c probable conserved integral membrane protein YP_638554.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpa:MAP3317 putative acetyltransferase YP_638555.1 TIGRFAM: isochorismate synthases; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: mpa:MAP3316 sochorismate synthase YP_638556.1 forms a homodimer in Mycobacterium tuberculosis; belongs to the dPGM superfamily YP_638557.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mpa:MAP3314c chromosome partitioning protein YP_638558.1 PFAM: metal-dependent phosphohydrolase, HD subdomain; KEGG: mpa:MAP1708 hypothetical protein YP_638559.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: sco:SCO7666 zinc-binding oxidoreductase (fragment) YP_638560.1 KEGG: mtc:MT3308 hypothetical protein YP_638561.1 PFAM: helicase-like DEAD/DEAH box helicase-like; KEGG: mpa:MAP3312 RhlE YP_638562.1 KEGG: mbo:Mb3236c hypothetical protein YP_638563.1 KEGG: mpa:MAP3310 hypothetical protein YP_638564.1 KEGG: mtc:MT3304 hypothetical protein YP_638565.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb3233 probable transcriptional regulatory protein (probably TetR-family) YP_638566.1 KEGG: mpa:MAP3307c hypothetical protein YP_638567.1 The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2,6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation YP_638568.1 TIGRFAM: conserved hypothetical protein; KEGG: mpa:MAP3305c hypothetical protein YP_638569.1 PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: mpa:MAP3304 hypothetical protein YP_638570.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP3303 LipV YP_638571.1 PFAM: UvrD/REP helicase; KEGG: mpa:MAP3301c hypothetical protein YP_638572.1 PFAM: UvrD/REP helicase; KEGG: mpa:MAP3300c probable ATP-dependent DNA helicase YP_638573.1 KEGG: mpa:MAP2061 hypothetical protein YP_638574.1 PFAM: TrkA-N Ion transport 2; KEGG: nfa:nfa45360 hypothetical protein YP_638575.1 can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates YP_638576.1 TIGRFAM: Glutaredoxin-like protein GlrX; PFAM: glutaredoxin glutaredoxin 2; KEGG: sco:SCO5187 glutaredoxin-like protein YP_638577.1 PFAM: UvrD/REP helicase HRDC; KEGG: mbo:Mb3222c probable DNA helicase II homolog UvrD2 YP_638578.1 PFAM: HMG-I and HMG-Y, DNA-binding transcription factor WhiB; KEGG: mpa:MAP3296c hypothetical protein YP_638579.1 PFAM: ABC-1; KEGG: mpa:MAP3295 hypothetical protein YP_638580.1 KEGG: mpa:MAP3294 hypothetical protein YP_638581.1 KEGG: mpa:MAP3293 hypothetical protein YP_638582.1 SMART: PDZ/DHR/GLGF; KEGG: mpa:MAP3292c PDZ domain-containing protein YP_638583.1 PFAM: protein of unknown function UPF0182; KEGG: mpa:MAP3291c hypothetical protein YP_638584.1 PFAM: transcriptional regulatory protein-like transcriptional activator domain; KEGG: nfa:nfa33290 putative transcriptional regulator YP_638585.1 PFAM: FAD linked oxidase-like; KEGG: sma:SAV5422 putative FAD-dependent oxygenase YP_638587.1 PFAM: transposase, mutator type; KEGG: mbo:Mb3142 probable transposase YP_638590.1 PFAM: phage integrase; KEGG: mlo:mlr0475 bacteriophage integrase YP_638591.1 KEGG: xoo:XOO0600 hypothetical protein YP_638596.1 KEGG: mpa:MAP4326c hypothetical protein YP_638598.1 KEGG: pac:PPA0849 transfer protein homolog TraA YP_638599.1 KEGG: ddi:DDB0216653 hypothetical protein YP_638600.1 KEGG: rso:RSc3232 putative bacteriophage-related protein YP_638601.1 KEGG: nfa:pnf1400 hypothetical protein YP_638602.1 SMART: Helix-turn-helix, AraC type; KEGG: nfa:nfa31760 putative DNA-binding protein YP_638603.1 PFAM: NLP/P60; KEGG: mpa:MAP1928c hypothetical protein YP_638604.1 KEGG: btk:BT9727_1739 hypothetical protein YP_638605.1 PFAM: protein of unknown function DUF305; KEGG: cgb:cg3280 putative secreted protein YP_638606.1 PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: cef:CE0279 putative sensor kinase YP_638607.1 PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: cdi:DIP0064 putative two-component system response regulator YP_638608.1 PFAM: NLP/P60; KEGG: mbo:Mb1513 hypothetical invasion protein YP_638609.1 PFAM: Penicillinase repressor; KEGG: tfu:Tfu_0567 possible regulator YP_638610.1 KEGG: lxx:Lxx12290 integral membrane protein YP_638612.1 PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: nfa:pnf1240 putative pyridoxal-phosphate dependent enzyme YP_638613.1 PFAM: major facilitator superfamily MFS_1; KEGG: nfa:pnf1250 putative transporter YP_638614.1 PFAM: transcriptional regulatory protein-like; KEGG: cdi:DIP0064 putative two-component system response regulator YP_638615.1 PFAM: NLP/P60; KEGG: mbo:Mb1514 hypothetical invasion protein YP_638616.1 PFAM: ErfK/YbiS/YcfS/YnhG; KEGG: mpa:MAP2322c LppS_2 YP_638617.1 PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc0298 probable B-ketoadipate enol-lactone hydrolase protein YP_638618.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mpa:MAP4283 hypothetical protein YP_638619.1 KEGG: nfa:nfa1610 hypothetical protein YP_638620.1 TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter ATPase, P type cation/copper-transporter Heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase Heavy metal transport/detoxification protein E1-E2 ATPase-associated region; KEGG: sco:SCO1046 putative metal transporter ATPase YP_638621.1 PFAM: YHS YP_638622.1 PFAM: protein of unknown function DUF156; KEGG: nfa:nfa8420 hypothetical protein YP_638624.1 PFAM: Integrase, catalytic region; KEGG: xcv:XCVb0014 IS1477 transposase YP_638625.1 KEGG: nfa:pnf1830 hypothetical protein YP_638626.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: nfa:pnf1870 putative ABC transporter ATP-binding protein YP_638627.1 KEGG: nfa:pnf1880 putative ABC transporter membrane protein YP_638629.1 TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter ATPase, P type cation/copper-transporter Heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase E1-E2 ATPase-associated region; KEGG: nfa:pnf1280 putative cation-transporting ATPase YP_638630.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_638631.1 KEGG: nfa:pnf1300 hypothetical protein YP_638633.1 PFAM: transposase, mutator type; KEGG: mbo:Mb3142 probable transposase YP_638634.1 KEGG: bbr:BB0911 putative serine protease YP_638635.1 PFAM: AAA ATPase, central region; SMART: ATPase; KEGG: bbr:BB0910 putative ATPase YP_638636.1 PFAM: DSBA oxidoreductase; KEGG: nfa:pnf1420 hypothetical protein YP_638637.1 TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase Heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase E1-E2 ATPase-associated region; KEGG: mbo:Mb2015c probable metal cation transporter P-type ATPase G CtpG YP_638638.1 KEGG: nfa:nfa53580 hypothetical protein YP_638639.1 KEGG: mbo:Mb1961c immunogenic protein MPT63 (antigen MPT63/MPB63) (16 KD immunoprotective extracellular protein) YP_638640.1 SMART: Toll-Interleukin receptor; KEGG: bme:BMEI1674 hypothetical protein YP_638641.1 PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: sco:SCO2475 LysR-family transcriptional regulator YP_638642.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll3991 putative oxidoreductase YP_638643.1 PFAM: transposase, mutator type; KEGG: sco:SCP1.259 putative transposon transposase YP_638644.1 PFAM: protein of unknown function DUF732 YP_638645.1 KEGG: mbo:Mb3126c hypothetical protein YP_638646.1 PFAM: DSBA oxidoreductase; KEGG: mtc:MT2344 hypothetical protein YP_638647.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP4312 hypothetical protein YP_638648.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mpa:MAP0072c hypothetical protein YP_638649.1 PFAM: Alcohol dehydrogenase GroES-like; KEGG: nfa:nfa35620 putative dehydrogenase YP_638650.1 PFAM: glycosyl transferase, family 51 penicillin-binding protein, transpeptidase PASTA; KEGG: mbo:Mb3707 probable bifunctional membrane-associated penicillin-binding protein 1A/1B PonA2 (murein polymerase) [includes: penicillin-insensitive transglycosylase (peptidoglycan tgase) + penicillin-sensitive transpeptidase (dd-transpeptidase)] YP_638651.1 PFAM: band 7 protein; KEGG: sma:SAV2212 putative membrane protease subunit, stomatin/prohibitin homolog YP_638652.1 PFAM: cytochrome P450; KEGG: mpa:MAP4068c hypothetical protein YP_638653.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP1477c hypothetical protein YP_638654.1 KEGG: mpa:MAP1745c hypothetical protein YP_638655.1 PFAM: regulatory protein, ArsR; KEGG: mpa:MAP0661c hypothetical protein YP_638656.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mbo:Mb2050c possible conserved membrane protein YP_638657.1 PFAM: regulatory protein, TetR; KEGG: sco:SCO6792 TetR-family transcriptional regulator YP_638658.1 KEGG: mpa:MAP0887c hypothetical protein YP_638659.1 KEGG: mpa:MAP0886c hypothetical protein YP_638660.1 PFAM: DoxX; KEGG: nfa:nfa10820 hypothetical protein YP_638661.1 TIGRFAM: peptide chain release factor 3 Small GTP-binding protein domain; PFAM: protein synthesis factor, GTP-binding; KEGG: nfa:nfa48950 putative peptide chain release factor YP_638664.1 KEGG: nfa:nfa11220 hypothetical protein YP_638665.1 PFAM: regulatory protein, TetR Tetracyclin repressor-like; KEGG: mpa:MAP0098c hypothetical protein YP_638666.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpa:RPA3304 putative 3-oxoacyl-acyl carrier protein reductase YP_638667.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_638668.1 KEGG: mpa:MAP1779c hypothetical protein YP_638669.1 activates fatty acids by binding to coenzyme A YP_638670.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: tfu:Tfu_1512 putative acyl-CoA dehydrogenase YP_638671.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rso:RS05466 probable dehydrogenase oxidoreductase protein YP_638672.1 PFAM: aminoglycoside phosphotransferase; KEGG: ccr:CC1435 hypothetical protein YP_638674.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa7240 putative transcriptional regulator YP_638675.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: sco:SCO3800 putative acyl-CoA dehydrogenase YP_638676.1 PFAM: transposase IS3/IS911; KEGG: fra:Francci3_1726 transposase IS3/IS911 YP_638677.1 PFAM: Integrase, catalytic region; KEGG: fra:Francci3_1727 integrase YP_638678.1 PFAM: Integrase, catalytic region; KEGG: lxx:Lxx22450 transposase, undefined YP_638679.1 PFAM: CoA-binding; KEGG: tfu:Tfu_1473 putative pimeloyl-CoA synthetase YP_638680.1 PFAM: Alpha/beta hydrolase fold-3; KEGG: bur:Bcep18194_A6075 lipolytic enzyme YP_638681.1 PFAM: Acyl-CoA dehydrogenase, type 2-like; KEGG: rsp:RSP_3959 hypothetical protein YP_638682.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rpa:RPA3299 putative long-chain-fatty-acid CoA ligase YP_638683.1 PFAM: Enoyl-CoA hydratase/isomerase 3-hydroxyacyl-CoA dehydrogenase-like 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mpa:MAP0790 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase YP_638684.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_638685.1 PFAM: FAD dependent oxidoreductase; KEGG: bja:bll3180 probable monooxygenase YP_638686.1 PFAM: luciferase-like; KEGG: mpa:MAP4250c hypothetical protein YP_638687.1 PFAM: ferredoxin oxidoreductase FAD/NAD(P)-binding Oxidoreductase FAD-binding region; KEGG: sco:SCO6678 iron-sulfur oxidoreductase beta subunit YP_638688.1 PFAM: cytochrome P450; KEGG: fra:Francci3_1599 cytochrome P450 YP_638689.1 PFAM: protein of unknown function DUF140; KEGG: mpa:MAP2117c hypothetical protein YP_638690.1 PFAM: protein of unknown function DUF140; KEGG: nfa:nfa5360 putative YrbE family protein YP_638691.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mtc:MT2018 virulence factor YP_638692.1 TIGRFAM: Mammalian cell entry; KEGG: mtc:MT2019 virulence factor mce family protein YP_638693.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mtc:MT2020 virulence factor mce family protein YP_638694.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mtc:MT2021 virulence factor mce family protein YP_638695.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mtc:MT2022 virulence factor mce family protein YP_638696.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mtc:MT2023 virulence factor mce family protein YP_638697.1 KEGG: mpa:MAP2110c hypothetical protein YP_638698.1 KEGG: mtc:MT2024.1 hypothetical protein YP_638699.1 KEGG: mtc:MT2025 hypothetical protein YP_638700.1 KEGG: mtc:MT2026 hypothetical protein YP_638701.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sha:SH0590 short chain dehydrogenase YP_638702.1 PFAM: Alpha/beta hydrolase fold-3; KEGG: bbr:BB4484 putative lipase YP_638703.1 PFAM: flavin reductase-like, FMN-binding; KEGG: sme:SMa0793 hypothetical protein with local similarity YP_638704.1 PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; KEGG: fra:Francci3_3186 GTP cyclohydrolase II YP_638705.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa7240 putative transcriptional regulator YP_638706.1 PFAM: MaoC-like dehydratase; KEGG: reu:Reut_B4169 MaoC-like dehydratase YP_638707.1 KEGG: reu:Reut_B4756 hypothetical protein YP_638708.1 KEGG: reu:Reut_B4757 thiolase YP_638709.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa24180 putative short chain dehydrogenase YP_638710.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mpa:MAP2672 hypothetical protein YP_638711.1 PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nfa:nfa35380 putative rifampin monooxygenase YP_638712.1 KEGG: bja:bll0083 hypothetical protein YP_638713.1 PFAM: methylenetetrahydrofolate reductase; KEGG: gsu:GSU0860 methylenetetrahydrofolate reductase family protein YP_638714.1 PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: sme:SMa0279 hypothetical protein YP_638715.1 KEGG: pac:PPA1638 putative ABC transporter YP_638716.1 KEGG: pac:PPA1639 putative ABC transporter YP_638717.1 KEGG: nfa:nfa9420 hypothetical protein YP_638718.1 PFAM: regulatory protein, TetR; KEGG: mlo:mll1924 probable transcription regulator YP_638719.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: bja:blr4790 putative oxidoreductase YP_638721.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mpa:MAP3190 NADPH quinone oxidoreductase, putative YP_638722.1 PFAM: alpha/beta hydrolase fold; KEGG: mtc:MT3260 hydrolase, alpha/beta hydrolase fold family YP_638723.1 PFAM: amine oxidase FAD dependent oxidoreductase; KEGG: mpa:MAP3228 utative flavin-containing monoamine oxidase YP_638724.1 KEGG: nfa:nfa26920 hypothetical protein YP_638725.1 PFAM: FAD dependent oxidoreductase; KEGG: mpa:MAP4062c hypothetical protein YP_638726.1 KEGG: mpa:MAP3225 hypothetical protein YP_638727.1 PFAM: aminoglycoside phosphotransferase; KEGG: mpa:MAP3224 hypothetical protein YP_638728.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb3192c probable transcriptional regulatory protein (probably TetR-family) YP_638729.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: nfa:nfa24620 putative ABC transporter ATP-binding protein YP_638730.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_638731.1 Catalyzes the transfer of electrons from NADH to quinone YP_638732.1 Catalyzes the transfer of electrons from NADH to quinone YP_638733.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_638734.1 PFAM: band 7 protein; KEGG: mpa:MAP3183 hypothetical protein YP_638735.1 KEGG: mpa:MAP3182 hypothetical protein YP_638736.1 KEGG: pac:PPA1975 nitric-oxide reductase subunit B YP_638737.1 Catalyzes the transfer of electrons from NADH to quinone YP_638738.1 Catalyzes the transfer of electrons from NADH to quinone YP_638739.1 Catalyzes the transfer of electrons from NADH to quinone YP_638740.1 Catalyzes the transfer of electrons from NADH to quinone YP_638741.1 Catalyzes the transfer of electrons from NADH to quinone YP_638742.1 KEGG: mpa:MAP3206 NADH dehydrogenase I, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit YP_638743.1 Catalyzes the transfer of electrons from NADH to quinone YP_638744.1 Catalyzes the transfer of electrons from NADH to quinone YP_638745.1 Catalyzes the transfer of electrons from NADH to quinone YP_638746.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_638747.1 Catalyzes the transfer of electrons from NADH to quinone YP_638748.1 SMART: Response regulator receiver; KEGG: mbo:Mb3167 probable response regulator YP_638749.1 KEGG: mpa:MAP3198 hypothetical protein YP_638750.1 PFAM: thiopurine S-methyltransferase Methyltransferase type 11 Methyltransferase type 12; KEGG: fra:Francci3_4194 methyltransferase type 12 YP_638751.1 KEGG: bja:blr2945 hypothetical protein YP_638752.1 PFAM: aminoglycoside phosphotransferase; KEGG: mpa:MAP3197 hypothetical protein YP_638753.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP3196 FadE12_3 YP_638754.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP3195 hypothetical protein YP_638755.1 PFAM: pyruvate carboxyltransferase; KEGG: mpa:MAP3194 hydroxymethylglutaryl-CoA lyase YP_638756.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: nfa:nfa16550 putative CoA-transferase YP_638757.1 KEGG: mpa:MAP3192 hypothetical protein YP_638758.1 PFAM: homogentisate 1,2-dioxygenase; KEGG: mpa:MAP3191 hypothetical protein YP_638759.1 KEGG: cef:CE1478 hypothetical protein YP_638760.1 PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: sma:SAV3796 hypothetical protein YP_638761.1 PFAM: Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP2022 hypothetical protein YP_638762.1 KEGG: mpa:MAP2023c hypothetical protein YP_638763.1 PFAM: putative esterase; KEGG: mbo:Mb1918c secreted antigen 85-B FbpB YP_638764.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: nfa:nfa56130 putative dehydrogenase YP_638765.1 PFAM: bifunctional deaminase-reductase-like; KEGG: sma:SAV471 hypothetical protein YP_638766.1 KEGG: nfa:nfa30670 hypothetical protein YP_638767.1 PFAM: PepSY-associated TM helix; KEGG: nfa:nfa44990 hypothetical protein YP_638768.1 PFAM: protein of unknown function DUF461; KEGG: nfa:nfa30680 hypothetical protein YP_638769.1 PFAM: Dyp-type peroxidase; KEGG: nfa:nfa30690 putative peroxidase YP_638770.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mbo:Mb3164 probable acyl-CoA dehydrogenase FadE23 YP_638771.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP3188 putative acyl-CoA dehydrogenase YP_638772.1 TIGRFAM: Histidinol-phosphate phosphatase, putative, inositol monophosphatase; PFAM: inositol monophosphatase; KEGG: mpa:MAP3187 hypothetical protein YP_638773.1 KEGG: mbo:Mb1413c hypothetical protein YP_638774.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpa:MAP3176 putative NADPH-ferredoxin reductase YP_638775.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1 YP_638776.1 PFAM: MscS Mechanosensitive ion channel; KEGG: mbo:Mb3131c possible conserved transmembrane protein YP_638777.1 KEGG: mpa:MAP3173c hypothetical protein YP_638778.1 KEGG: mbo:Mb3129c putative cell division ATP-binding protein FtsE (septation component-transport ATP-binding protein ABC transporter); TIGRFAM: Cell division ATP-binding protein FtsE Cell division protein FtsE; PFAM: ABC transporter related; SMART: ATPase YP_638779.1 PFAM: protein of unknown function DUF214; KEGG: mtc:MT3185 cell division protein FtsX YP_638780.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_638781.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: mpa:MAP3169c hypothetical protein YP_638782.1 TIGRFAM: GGDEF domain; PFAM: GGDEF EAL; KEGG: fra:Francci3_3617 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) YP_638783.1 KEGG: lxx:Lxx08820 phage-related integrase YP_638784.1 KEGG: mpa:MAP4019 hypothetical protein YP_638785.1 PFAM: PAS fold-3; KEGG: mpa:MAP3269 hypothetical protein YP_638786.1 PFAM: regulatory protein, LuxR; KEGG: mpa:MAP4317c hypothetical protein YP_638788.1 PFAM: regulatory proteins, IclR; KEGG: mpa:MAP2738c hypothetical protein YP_638789.1 PFAM: ring hydroxylating dioxygenase, alpha subunit Rieske [2Fe-2S] region; KEGG: mpa:MAP2734 hypothetical protein YP_638790.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mpa:MAP2735 hypothetical protein YP_638791.1 Converts cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol) into 3-(2,3-dihydroxylphenyl)propionate YP_638792.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sma:SAV1609 putative ferredoxin reductase YP_638793.1 PFAM: Integrase, catalytic region; KEGG: cef:CE1235 hypothetical protein YP_638794.1 PFAM: transposase IS3/IS911; KEGG: cef:CE1234 hypothetical protein YP_638795.1 PFAM: Cupin 2, conserved barrel; KEGG: bha:BH2002 gentisate 1,2-dioxygenase YP_638796.1 PFAM: dihydrodipicolinate synthetase; KEGG: bja:bll7272 putative dihydrodipicolinate synthase YP_638797.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mtc:MT3673 extradiol ring-cleavage dioxygenase YP_638799.1 PFAM: dihydrodipicolinate synthetase; KEGG: ret:RHE_PC00042 probable dihydrodipicolinate synthetase protein YP_638800.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mpa:MAP2735 hypothetical protein YP_638801.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein-like FAD dependent oxidoreductase; KEGG: mka:MK0828 succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_638802.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: afu:AF1461 iron-sulfur cluster binding protein, putative YP_638803.1 PFAM: aldehyde dehydrogenase; KEGG: jan:Jann_3789 aldehyde dehydrogenase (NAD+) YP_638804.1 KEGG: mbo:Mb0944c putative transposase YP_638805.1 PFAM: Integrase, catalytic region; KEGG: mbo:Mb2838c probable transposase YP_638807.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mpa:MAP2735 hypothetical protein YP_638808.1 PFAM: ring hydroxylating dioxygenase, alpha subunit Rieske [2Fe-2S] region; KEGG: mpa:MAP2734 hypothetical protein YP_638809.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gka:GK1683 short chain dehydrogenase YP_638810.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: ppu:PP0552 2,3-butanediol dehydrogenase YP_638811.1 KEGG: reu:Reut_B5778 glycosyl hydrolase, BNR repeat YP_638812.1 PFAM: ring hydroxylating dioxygenase, alpha subunit Rieske [2Fe-2S] region; KEGG: bbr:BB1591 putative oxygenase (large subunit) YP_638813.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: rso:RSc1089 putative salicylate-5-hydroxylase small oxygenase component oxidoreductase protein YP_638814.1 PFAM: Sterol-binding; KEGG: aae:aq_090 hypothetical protein YP_638815.1 PFAM: intradiol ring-cleavage dioxygenase; KEGG: mpa:MAP2730c putative protocatechuate 3,4-dioxygenase alpha subunit YP_638816.1 PFAM: protein of unknown function DUF140; KEGG: mtc:MT2016 conserved hypothetical protein YP_638817.1 KEGG: mpa:MAP0758 putative ABC transport system permease protein YP_638818.1 PFAM: Integrase, catalytic region; KEGG: cjk:jk1405 transposase for Tn3599 YP_638819.1 KEGG: mtc:MT2017 conserved hypothetical protein YP_638820.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mtc:MT2018 virulence factor YP_638821.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mtc:MT2019 virulence factor mce family protein YP_638822.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mtc:MT2020 virulence factor mce family protein YP_638823.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mtc:MT2021 virulence factor mce family protein YP_638824.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mtc:MT2022 virulence factor mce family protein YP_638825.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mtc:MT2023 virulence factor mce family protein YP_638826.1 KEGG: mtc:MT2024 hypothetical protein YP_638827.1 KEGG: mtc:MT2024.1 hypothetical protein YP_638828.1 PFAM: alpha/beta hydrolase fold Epoxide hydrolase-like; KEGG: mpa:MAP1989c hypothetical protein YP_638829.1 PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_A4372 aldehyde dehydrogenase YP_638830.1 TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV5648 putative efflux membrane protein YP_638831.1 PFAM: regulatory protein, MarR; KEGG: fra:Francci3_2015 transcriptional regulator, MarR family YP_638832.1 PFAM: ring hydroxylating dioxygenase, alpha subunit Rieske [2Fe-2S] region; KEGG: mpa:MAP2734 hypothetical protein YP_638833.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mpa:MAP2735 hypothetical protein YP_638834.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: bur:Bcep18194_B1325 zinc-containing alcohol dehydrogenase superfamily YP_638835.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbr:BB1083 hypothetical protein YP_638836.1 KEGG: eli:ELI_14965 putative nonspecific lipid-transfer protein YP_638837.1 PFAM: protein of unknown function DUF35; KEGG: eli:ELI_14970 hypothetical protein YP_638838.1 KEGG: tfu:Tfu_1482 hypothetical protein YP_638839.1 PFAM: ring hydroxylating dioxygenase, alpha subunit Rieske [2Fe-2S] region; KEGG: bbr:BB0728 hydroxylating alpha subunit of a dioxygenase system YP_638840.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: bbr:BB0730 hydroxylating beta subunit of a dioxygenase system YP_638841.1 PFAM: Cupin 2, conserved barrel; KEGG: reu:Reut_A0378 cupin region YP_638842.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: ssn:SSO_3280 putative dehydrogenase YP_638843.1 PFAM: regulatory protein, MarR; KEGG: atc:AGR_C_466 hypothetical protein YP_638844.1 PFAM: transposase, mutator type; KEGG: mbo:Mb3142 probable transposase YP_638845.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP0693 2-hydroxy-6-phenylhexa-2,4-dienoic acid hydrolase YP_638846.1 PFAM: ring hydroxylating dioxygenase, alpha subunit Rieske [2Fe-2S] region; KEGG: bbr:BB0728 hydroxylating alpha subunit of a dioxygenase system YP_638847.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: sbo:SBO_2563 small terminal subunit of phenylpropionate dioxygenase YP_638848.1 PFAM: oxidoreductase-like Oxidoreductase-like homoserine dehydrogenase, NAD-binding; KEGG: bbr:BB4777 probable dehydrogenase YP_638849.1 PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: reu:Reut_B4784 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YP_638850.1 PFAM: class II aldolase/adducin-like; KEGG: mpa:MAP2737 FliH YP_638851.1 Converts cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol) into 3-(2,3-dihydroxylphenyl)propionate YP_638852.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B1431 glyoxalase/bleomycin resistance protein/dioxygenase YP_638853.1 PFAM: transposase, mutator type; KEGG: mbo:Mb3142 probable transposase YP_638854.1 KEGG: bja:bll5282 biphenyl-2,3-diol 1,2-dioxygenase YP_638855.1 PFAM: ring hydroxylating dioxygenase, alpha subunit Rieske [2Fe-2S] region; KEGG: mpa:MAP2734 hypothetical protein YP_638856.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mpa:MAP2735 hypothetical protein YP_638858.1 PFAM: Integrase, catalytic region; KEGG: xcv:XCVb0014 IS1477 transposase YP_638859.1 PFAM: helix-turn-helix, AraC type; KEGG: nfa:nfa22300 putative transcriptional regulator YP_638860.1 PFAM: Ketopantoate reductase ApbA/PanE-like; KEGG: ppu:PP2998 2-dehydropantoate 2-reductase, putative YP_638861.1 PFAM: dihydrodipicolinate synthetase; KEGG: sil:SPO2882 dihydrodipicolinate synthase family protein YP_638862.1 PFAM: regulatory proteins, IclR; KEGG: sco:SCO6669 transcriptional regulator YP_638863.1 TIGRFAM: Protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: mpa:MAP2731c putative protocatechuate 3,4-dioxygenase beta subunit YP_638864.1 TIGRFAM: Protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: mpa:MAP2730c putative protocatechuate 3,4-dioxygenase alpha subunit YP_638865.1 PFAM: fumarate lyase; KEGG: mpa:MAP2729c putative 3-carboxy-cis,cis-muconate cycloisomerase YP_638866.1 TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: alpha/beta hydrolase fold Carboxymuconolactone decarboxylase; KEGG: sco:SCO6697 putative 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase YP_638867.1 KEGG: bpe:BP0221 3-oxoadipate CoA-transferase subunit A; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; PFAM: coenzyme A transferase YP_638868.1 KEGG: bbr:BB0413 3-oxoadipate CoA-transferase subunit B; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; PFAM: coenzyme A transferase YP_638869.1 KEGG: bma:BMAA1365 phenylacetaldehyde dehydrogenase YP_638870.1 KEGG: mtc:MT2026 hypothetical protein YP_638871.1 PFAM: Cupin 2, conserved barrel; KEGG: plu:plu1323 hypothetical protein YP_638872.1 PFAM: protein of unknown function DUF732; KEGG: mtc:MT2025 hypothetical protein YP_638873.1 PFAM: Integrase, catalytic region; KEGG: xcv:XCVb0014 IS1477 transposase YP_638874.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: tma:TM0325 oxidoreductase, short chain dehydrogenase/reductase family YP_638875.1 KEGG: sil:SPO2975 membrane protein, putative YP_638876.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mbo:Mb2285c putative apolipoprotein N-acyltransferase YP_638877.1 PFAM: protein of unknown function DUF348 Transglycosylase-like G5; KEGG: mpa:MAP0974 hypothetical protein YP_638878.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: sma:SAV5335 putative oxidoreductase transmembrane protein YP_638879.1 TIGRFAM: conserved hypothetical protein; KEGG: bce:BC0817 hypothetical membrane spanning protein YP_638880.1 PFAM: beta-lactamase; KEGG: mpa:MAP3161c hypothetical protein YP_638881.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: mpa:MAP1667 hypothetical protein YP_638882.1 PFAM: cytochrome P450; KEGG: mpa:MAP1344 hypothetical protein YP_638883.1 KEGG: ade:Adeh_0244 LigA YP_638884.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: tfu:Tfu_0591 hypothetical protein YP_638885.1 KEGG: mpa:MAP2724c hypothetical protein YP_638886.1 KEGG: mpa:MAP3149c hypothetical protein YP_638887.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mbo:Mb1381 possible acyl-CoA dehydrogenase FadE14 YP_638888.1 converts medium- to long-chain aliphatic fatty acids into acyl adenylate; involved in mycobactin synthesis YP_638889.1 PFAM: phosphopantetheine-binding; KEGG: mbo:Mb1379 probable acyl carrier protein (ACP) YP_638890.1 PFAM: protein of unknown function DUF190; KEGG: mpa:MAP4307 hypothetical protein YP_638891.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling YP_638892.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling YP_638893.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate YP_638894.1 PFAM: General substrate transporter protein of unknown function DUF1228 major facilitator superfamily MFS_1; KEGG: mpa:MAP3145c hypothetical protein YP_638895.1 PFAM: protein of unknown function DUF222; KEGG: mtu:Rv1128c hypothetical protein Rv1128c YP_638896.1 PFAM: Integrase, catalytic region; KEGG: cgb:cg2914 transposase YP_638897.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: sco:SCO0906 hypothetical protein YP_638900.1 PFAM: PE-PPE-like; KEGG: mbo:Mb1216c possible exported protein YP_638901.1 PFAM: helix-turn-helix, AraC type; KEGG: nfa:nfa43930 putative transcriptional regulator YP_638902.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nfa:nfa43940 hypothetical protein YP_638903.1 PFAM: ABC transporter related; KEGG: nfa:nfa43950 putative excision nuclease ABC subunit YP_638905.1 PFAM: Conserved TM helix; KEGG: nfa:nfa48310 hypothetical protein YP_638906.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: sco:SCO0723 hypothetical protein YP_638907.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: nfa:nfa54210 putative acyl-CoA dehydrogenase YP_638908.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: nfa:nfa54220 putative acyl-CoA dehydrogenase YP_638909.1 TIGRFAM: PAS; PFAM: PAS fold-4 YP_638910.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0969 CprA YP_638911.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0968 hypothetical protein YP_638913.1 TIGRFAM: GGDEF domain; PFAM: GGDEF EAL GAF; KEGG: mle:ML1750 hypothetical protein YP_638914.1 PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: mbo:Mb1390c hypothetical protein YP_638915.1 KEGG: mbo:Mb1391c hypothetical protein YP_638916.1 PFAM: MaoC-like dehydratase; KEGG: mpa:MAP3538 hypothetical protein YP_638917.1 PFAM: flavin-containing monooxygenase FMO; KEGG: nfa:nfa24200 putative flavin-containing monooxygenase YP_638918.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0179c hypothetical protein YP_638919.1 PFAM: alpha/beta hydrolase fold; KEGG: nfa:nfa24190 putative hydrolase YP_638920.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP2410 hypothetical protein YP_638921.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP2409 probable acyl-CoA dehydrogenase YP_638922.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_638923.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_638924.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP2405c putative acyl-CoA dehydrogenase YP_638925.1 PFAM: regulatory protein GntR, HTH GntR-like; KEGG: mpa:MAP2404c hypothetical protein YP_638926.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP2402 hypothetical protein YP_638927.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP2401 FadD35 YP_638928.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP2400 hypothetical protein YP_638929.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP2399 EchA16_1 YP_638930.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP2398 hypothetical protein YP_638931.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP2397 EchA10 YP_638932.1 KEGG: mpa:MAP2396c hypothetical protein YP_638933.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP2395c hypothetical protein YP_638934.1 PFAM: Thiolase; KEGG: mpa:MAP2060c hypothetical protein YP_638935.1 PFAM: regulatory protein, TetR Tetracyclin repressor-like; KEGG: mpa:MAP2394 hypothetical protein YP_638936.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_638937.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP2393c hypothetical protein YP_638938.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_638939.1 PFAM: amidohydrolase 2; KEGG: mpa:MAP2389c hypothetical protein YP_638940.1 activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence YP_638941.1 PFAM: amidohydrolase 2; KEGG: mpa:MAP2387c hypothetical protein YP_638942.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP2386c hypothetical protein YP_638943.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP2385c hypothetical protein YP_638944.1 PFAM: Thiolase; KEGG: mpa:MAP2384 hypothetical protein YP_638945.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mpa:MAP2383 hypothetical protein YP_638946.1 PFAM: aldehyde dehydrogenase; KEGG: nfa:nfa46630 putative aldehyde dehydrogenase YP_638947.1 PFAM: cytochrome P450; KEGG: mpa:MAP2382 hypothetical protein YP_638949.1 PFAM: aldehyde dehydrogenase; KEGG: ccr:CC1849 probable coniferyl aldehyde dehydrogenase YP_638950.1 PFAM: cytochrome P450; KEGG: mpa:MAP0730c hypothetical protein YP_638951.1 activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence YP_638952.1 PFAM: isochorismatase hydrolase; KEGG: mpa:MAP2378 hypothetical protein YP_638953.1 PFAM: Rieske [2Fe-2S] region; KEGG: mpa:MAP2377 hypothetical protein YP_638954.1 PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase Male sterility-like; KEGG: mtc:MT0147 dihydroflavonol-4-reductase YP_638955.1 KEGG: mpa:MAP2376c hypothetical protein YP_638956.1 KEGG: mpa:MAP2375c hypothetical protein YP_638957.1 PFAM: protein of unknown function DUF1486; KEGG: mpa:MAP2374c hypothetical protein YP_638958.1 PFAM: luciferase-like; KEGG: mpa:MAP2373c hypothetical protein YP_638959.1 PFAM: carboxyl transferase; KEGG: mpa:MAP2372 AccD4_2 YP_638960.1 KEGG: mbo:Mb1395 probable oxidoreductase YP_638961.1 PFAM: cytochrome P450; KEGG: mpa:MAP2371c hypothetical protein YP_638962.1 KEGG: cgb:cg0757 hypothetical protein YP_638963.1 PFAM: carbon starvation protein CstA; KEGG: mpa:MAP3118 carbon starvation protein A YP_638964.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA YP_638965.1 KEGG: fra:Francci3_4276 GatB/YqeY YP_638966.1 PFAM: oxidoreductase, molybdopterin binding; KEGG: sco:SCO0555 membrane-bound oxidoreductase YP_638967.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3116c 3-hydroxyacyl-CoA dehydrogenase YP_638968.1 PFAM: helix-turn-helix, HxlR type; KEGG: mlo:mlr1855 hypothetical protein YP_638969.1 PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: mbo:Mb1440c putative methyltransferase YP_638970.1 PFAM: aminoglycoside phosphotransferase; KEGG: mpa:MAP0255c hypothetical protein YP_638971.1 PFAM: protein of unknown function DUF81; KEGG: lpl:lp_2688 transport protein YP_638972.1 KEGG: mpa:MAP3110c hypothetical protein YP_638973.1 PFAM: cytochrome P450; KEGG: mpa:MAP3109 probable cytochrome P450 136 CYP136 YP_638974.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP3108c hypothetical protein YP_638975.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3107c short chain dehydrogenase YP_638976.1 KEGG: mpa:MAP2044 hypothetical protein YP_638977.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_638978.1 PFAM: regulatory protein, TetR; KEGG: mtc:MT3141 transcriptional regulator, TetR family YP_638979.1 PFAM: NADPH-dependent FMN reductase; KEGG: mpa:MAP3104c hypothetical protein YP_638980.1 TIGRFAM: Glutaredoxin-like protein NrdH; PFAM: glutaredoxin; KEGG: mle:ML1736 glutaredoxin electron transport component of NrdEF YP_638981.1 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF YP_638982.1 Catalyzes the rate-limiting step in dNTP synthesis YP_638983.1 KEGG: pfo:Pfl_3343 probable transmembrane protein YP_638984.1 KEGG: sma:SAV1186 hypothetical protein YP_638985.1 PFAM: LysR, substrate-binding; KEGG: sma:SAV1185 putative LysR-family trancsriptional regulator YP_638986.1 KEGG: ath:At3g50340 expressed protein YP_638987.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pae:PA5524 probable short-chain dehydrogenase YP_638988.1 PFAM: extracellular solute-binding protein, family 5; KEGG: mlo:mlr0985 probable hemin-binding lipoprotein YP_638989.1 PFAM: regulatory protein, TetR; KEGG: pfo:Pfl_1061 possible transcriptional regulator, TetR family YP_638990.1 TIGRFAM: agmatinase, putative; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: fra:Francci3_0848 agmatinase, putative YP_638991.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase Lycopene beta and epsilon cyclase FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fra:Francci3_0537 geranylgeranyl reductase YP_638992.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb3076c probable transcriptional regulatory protein (probably AsnC-family) YP_638993.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE YP_638994.1 PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mpa:MAP2474c hypothetical protein YP_638997.1 PFAM: General substrate transporter major facilitator superfamily MFS_1; KEGG: cef:CE1595 putative transport protein YP_639000.1 PFAM: putative esterase; KEGG: mbo:Mb0134c secreted antigen 85-C FbpC (85C) (antigen 85 complex C) (AG58C) (mycolyl transferase 85C) (fibronectin-binding protein C) YP_639001.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mbo:Mb3071 probable NADP-dependent alcohol dehydrogenase AdhC YP_639002.1 PFAM: YCII-related; KEGG: sco:SCO6725 hypothetical protein YP_639003.1 KEGG: sma:SAV6700 hypothetical protein YP_639004.1 KEGG: nfa:nfa22200 hypothetical protein YP_639005.1 PFAM: biotin/lipoyl attachment ATP-dependent carboxylate-amine ligase-like, ATP-grasp Allophanate hydrolase subunit 2 Allophanate hydrolase subunit 1 Carbamoyl-phosphate synthase L chain, ATP-binding Carbamoyl-phosphate synthetase large chain-like biotin carboxylase-like; KEGG: sma:SAV6698 putative urea amidolyase YP_639006.1 catalyzes the hydrolysis of allophanate YP_639007.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa22230 putative transcriptional regulator YP_639008.1 KEGG: tfu:Tfu_1630 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase YP_639009.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr0987 probable permease of ABC transporter YP_639010.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr0988 permease protein of dipeptide ABC transporter YP_639011.1 PFAM: isochorismatase hydrolase; KEGG: jan:Jann_1289 isochorismatase hydrolase YP_639012.1 PFAM: extracellular solute-binding protein, family 5; KEGG: mlo:mlr0985 probable hemin-binding lipoprotein YP_639013.1 PFAM: beta-lactamase-like; KEGG: tcx:Tcr_1803 beta-lactamase-like YP_639015.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: aci:ACIAD1296 putative oxidoreductase YP_639016.1 PFAM: periplasmic binding protein; KEGG: mbo:Mb3070 probable FeIII-dicitrate-binding periplasmic lipoprotein FecB YP_639017.1 PFAM: cytochrome c oxidase, subunit I; KEGG: mbo:Mb3069c probable cytochrome C oxidase polypeptide I CtaD (cytochrome AA3 subunit 1) YP_639018.1 KEGG: mbo:Mb3068c probable phosphoserine phosphatase SerB2 (PSP) (O-phosphoserine phosphohydrolase) (PSPase); TIGRFAM: phosphoserine phosphatase SerB HAD-superfamily hydrolase subfamily IB, PSPase-like; PFAM: amino acid-binding ACT Haloacid dehalogenase-like hydrolase Haloacid dehalogenase-like hydrolase, type 3 YP_639019.1 PFAM: regulatory protein GntR, HTH aminotransferase, class I and II; KEGG: nfa:nfa53660 putative transcriptional regulator/aminotransferase YP_639020.1 PFAM: protein of unknown function DUF161; KEGG: sma:SAV6929 putative membrane protein YP_639021.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: mbo:Mb3067c probable conserved ATP-binding protein ABC transporter YP_639022.1 PFAM: NUDIX hydrolase; KEGG: mpa:MAP3088c hypothetical protein YP_639023.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mbo:Mb3065c enoyl-CoA hydratase YP_639024.1 PFAM: UbiE/COQ5 methyltransferase Methyltransferase type 11 Methyltransferase type 12; KEGG: mpa:MAP3086c hypothetical protein YP_639025.1 KEGG: mpa:MAP3085c hypothetical protein YP_639026.1 KEGG: mtc:MT3121 immunogenic protein MPB64/MPT64 precursor YP_639027.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: cdi:DIP2251 putative sodium/alanine symporter YP_639028.1 KEGG: mpa:MAP3083 hypothetical protein YP_639029.1 KEGG: mbo:Mb3060c possible transferase YP_639030.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mbo:Mb2038c hypothetical protein YP_639031.1 KEGG: mbo:Mb1794c hypothetical protein YP_639032.1 PFAM: glycosyl transferase, group 1; KEGG: mpa:MAP3064 hypothetical protein YP_639033.1 PFAM: glycoside hydrolase, family 57; KEGG: mpa:MAP3063 hypothetical protein YP_639034.1 PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: mpa:MAP3062 hypothetical protein YP_639035.1 PFAM: electron transfer flavoprotein beta-subunit; KEGG: mbo:Mb3055c probable electron transfer flavoprotein (beta-subunit) FixA (beta-ETF) (electron transfer flavoprotein small subunit) (ETFSS) YP_639036.1 PFAM: electron transfer flavoprotein beta-subunit electron transfer flavoprotein, alpha subunit; KEGG: mpa:MAP3060c electron transfer flavoprotein, alpha subunit YP_639037.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3012c hypothetical protein YP_639038.1 KEGG: mtc:MT3111 hypothetical protein YP_639039.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mbo:Mb3052c hypothetical protein YP_639040.1 PFAM: aminotransferase, class V aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mpa:MAP3058c cysteine desulfurase YP_639041.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_639042.1 KEGG: mpa:MAP3056 LpqA YP_639043.1 PFAM: Methionine synthase, vitamin-B12 independent; KEGG: mbo:Mb3040c hypothetical protein YP_639044.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cjk:jk0224 acyl-CoA synthetase YP_639045.1 KEGG: eli:ELI_08855 phosphoribosylglycinamide formyltransferase protein YP_639046.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB YP_639047.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine YP_639048.1 PFAM: protein of unknown function DUF350; KEGG: mtc:MT2674.1 hypothetical protein YP_639049.1 KEGG: mtc:MT2674 hypothetical protein YP_639050.1 KEGG: mpa:MAP1034c hypothetical protein YP_639051.1 KEGG: mpa:MAP1035c hypothetical protein YP_639052.1 PFAM: Hemerythrin HHE cation binding region; KEGG: mpa:MAP3257c hypothetical protein YP_639053.1 KEGG: mpa:MAP2602 hypothetical protein YP_639054.1 PFAM: amino acid-binding ACT; KEGG: mtc:MT3093 hypothetical protein YP_639055.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain YP_639056.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_639057.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis YP_639058.1 PFAM: cutinase; KEGG: mpa:MAP1476c hypothetical protein YP_639059.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_639060.1 KEGG: mpa:MAP0056c hypothetical protein YP_639061.1 PFAM: Xylose isomerase-like TIM barrel; KEGG: mpa:MAP0057c hypothetical protein YP_639062.1 KEGG: mpa:MAP0058c hypothetical protein YP_639063.1 PFAM: luciferase-like; KEGG: mpa:MAP0059c hypothetical protein YP_639064.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP3121 putative enoyl-CoA hydratase YP_639065.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP3122 FadE1_2 YP_639066.1 PFAM: aminoglycoside phosphotransferase; KEGG: mpa:MAP3124c hypothetical protein YP_639067.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3125c hypothetical protein YP_639068.1 KEGG: mpa:MAP3041 LppZ YP_639069.1 PFAM: DoxX; KEGG: mbo:Mb3030c hypothetical protein YP_639070.1 KEGG: mbo:Mb3029 low molecular weight protein antigen 6 (CFP-6) YP_639071.1 acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate YP_639072.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit YP_639073.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_639074.1 KEGG: mpa:MAP3034 hypothetical protein YP_639075.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_639076.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis YP_639077.1 KEGG: mac:MA0515 hypothetical protein YP_639078.1 PFAM: amidohydrolase Amidohydrolase 3; KEGG: oih:OB0305 aryldialkylphosphatase related protein YP_639079.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: nwi:Nwi_2139 antibiotic biosynthesis monooxygenase YP_639080.1 PFAM: regulatory protein, MarR; KEGG: sco:SCO7696 MarR-family transcriptional regulator YP_639081.1 PFAM: major facilitator superfamily MFS_1; KEGG: mbo:Mb3018 probable conserved integral membrane protein YP_639082.1 PFAM: secretory lipase; KEGG: cjk:jk1957 putative secreted protein YP_639083.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mbo:Mb3017c possible 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (HhdD isomerase) YP_639084.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_639085.1 PFAM: regulatory proteins, IclR; KEGG: mpa:MAP3027 hypothetical protein YP_639086.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate YP_639087.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D YP_639088.1 PFAM: histone-like DNA-binding protein; KEGG: mpa:MAP3024c HupB YP_639089.1 PFAM: NUDIX hydrolase Phosphoglycerate mutase; KEGG: mpa:MAP3023 MutT1 YP_639090.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate YP_639091.1 KEGG: mpa:MAP3021 hypothetical protein YP_639092.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_639093.1 catalyzes the formation of cysteine and 2-oxobutanoate from cystathionine YP_639094.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_639095.1 KEGG: mbo:Mb3004 possible conserved secreted protein YP_639096.1 PFAM: regulatory proteins, AsnC/Lrp; KEGG: sco:SCO5561 hypothetical protein YP_639097.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP YP_639098.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine YP_639099.1 required for 70S ribosome assembly YP_639100.1 PFAM: Dak phosphatase; KEGG: mbo:Mb2999c conserved hypothetical alanine rich protein YP_639101.1 catalyzes branch migration in Holliday junction intermediates YP_639102.1 KEGG: mpa:MAP3008c hypothetical protein YP_639103.1 PFAM: aldo/keto reductase; KEGG: mbo:Mb2996 probable oxidoreductase YP_639104.1 PFAM: aldo/keto reductase; KEGG: nfa:nfa6720 putative oxidoreductase YP_639105.1 PFAM: Alpha/beta hydrolase fold-3; KEGG: mpa:MAP3006c LipN YP_639106.1 KEGG: mpa:MAP3005c hypothetical protein YP_639107.1 PFAM: Vitamin K epoxide reductase; KEGG: mbo:Mb2992c probable conserved integral membrane protein YP_639108.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate YP_639109.1 PFAM: conserved hypothetical protein 95; KEGG: mpa:MAP3003c hypothetical protein YP_639110.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_639111.1 PFAM: Hemerythrin HHE cation binding region; KEGG: mpa:MAP3153 hypothetical protein YP_639112.1 KEGG: mtc:MT2997 conserved hypothetical protein YP_639113.1 PFAM: protein of unknown function DUF177; KEGG: mpa:MAP2996c hypothetical protein YP_639114.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity YP_639115.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_639116.1 PFAM: OsmC-like protein; KEGG: mpa:MAP2992c hypothetical protein YP_639117.1 catalyzes the hydrolysis of acylphosphate YP_639118.1 TIGRFAM: Chromosome segregation protein SMC; PFAM: SMC protein-like SMCs flexible hinge; KEGG: mpa:MAP2990c chromosome segregation SMC protein YP_639119.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate YP_639120.1 KEGG: mpa:MAP2989c signal recognition particle FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G-domain; SMART: ATPase YP_639121.1 TIGRFAM: ammonium transporter; PFAM: Rh-like protein/ammonium transporter; KEGG: cgb:cg2261 low affinity ammonium uptake protein YP_639122.1 PFAM: nitrogen regulatory protein P-II; KEGG: nfa:nfa41630 putative nitrogen regulatory protein P-II YP_639123.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; also involved in adenylylating and deadelnylyating GlnK YP_639124.1 KEGG: mpa:MAP2983c signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G-domain Signal peptide binding (SRP54) M-domain; SMART: ATPase YP_639125.1 PFAM: amidohydrolase; KEGG: mbo:Mb2939c hypothetical protein YP_639126.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: mpa:MAP2979 D-alanyl-D-alanine carboxypeptidase YP_639127.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: mbo:Mb2935 probable D-alanyl-D-alanine carboxypeptidase DacB2 (penicillin-binding protein) (dd-peptidase) (dd-carboxypeptidase) (PBP) (dd-transpeptidase) (serine-type D-ala-D-ALA carboxypeptidase) YP_639128.1 KEGG: mbo:Mb2934c hypothetical protein YP_639129.1 PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: nfa:nfa7870 hypothetical protein YP_639130.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_639131.1 KEGG: mpa:MAP2976c hypothetical protein YP_639132.1 Essential for efficient processing of 16S rRNA YP_639133.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA YP_639134.1 KEGG: mbo:Mb2929 probable conserved alanine rich lipoprotein LppW YP_639135.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_639136.1 KEGG: mpa:MAP2971c probable signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; PFAM: peptidase S24, S26A and S26B YP_639137.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids YP_639138.1 KEGG: mbo:Mb2925c hypothetical protein YP_639139.1 PFAM: beta-lactamase; KEGG: mpa:MAP1700c hypothetical protein YP_639140.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: pac:PPA1954 predicted sugar phosphatase/hydrolase YP_639141.1 PFAM: dehydrogenase, E1 component Transketolase, central region Transketolase-like; KEGG: nfa:nfa35780 putative transketolase YP_639142.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mpa:MAP2406c hypothetical protein YP_639143.1 PFAM: acyl-CoA thioesterase; KEGG: sco:SCO2773 acyl CoA thioesterase II YP_639144.1 PFAM: AMP-dependent synthetase and ligase; KEGG: fra:Francci3_1593 AMP-dependent synthetase and ligase YP_639145.1 PFAM: ABC transporter related Transport-associated OB; SMART: ATPase; KEGG: pfl:PFL_3040 iron(III) ABC transporter, ATP-binding protein YP_639146.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl_2838 binding-protein-dependent transport systems inner membrane component YP_639147.1 PFAM: extracellular solute-binding protein, family 1; KEGG: mlo:mlr3495 iron-binding periplasmic protein; sfuA protein precursor YP_639148.1 PFAM: protein of unknown function DUF1206; KEGG: nfa:nfa21460 hypothetical protein YP_639150.1 PFAM: protein of unknown function UPF0102; KEGG: mtc:MT2966 predicted endonuclease YP_639151.1 KEGG: mbo:Mb2921c magnesium chelatase family protein; TIGRFAM: Mg chelatase-related protein; PFAM: magnesium chelatase, ChlI subunit ATPase associated with various cellular activities, AAA_5; SMART: ATPase YP_639152.1 TIGRFAM: DNA processing protein DprA, putative; PFAM: SMF protein; KEGG: mtc:MT2964 smf family protein YP_639153.1 PFAM: Siderophore-interacting protein FAD-binding 9, siderophore-interacting; KEGG: mtc:MT2963 siderophore utilization protein YP_639154.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mpa:MAP2959c hypothetical protein YP_639155.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs YP_639157.1 PFAM: peptidase M23B; KEGG: mbo:Mb2915 hypothetical protein YP_639158.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_639159.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_639160.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_639161.1 PFAM: protein of unknown function DUF214; KEGG: gsu:GSU0677 ABC transporter, permease protein, putative YP_639162.1 PFAM: protein of unknown function DUF214; KEGG: hma:rrnAC0665 ABC transporter permease protein YP_639163.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: tma:TM0352 ABC transporter, ATP-binding protein YP_639164.1 PFAM: amino acid permease-associated region; KEGG: lmf:LMOf2365_0046 amino acid permease family protein YP_639165.1 catalyzes the formation of phenylacetaldehyde from 2-phenylethylamine YP_639166.1 PFAM: glycerate kinase; KEGG: gka:GK3465 glycerate kinase YP_639167.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: sth:STH3215 putative glycerate dehydrogenase YP_639168.1 Catalyzes the phosphorylation of UMP to UDP YP_639169.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_639170.1 PFAM: phosphatidate cytidylyltransferase; KEGG: mpa:MAP2944c phosphatidate cytidylyltransferase YP_639171.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance YP_639172.1 KEGG: sma:SAV7017 hypothetical protein YP_639173.1 PFAM: aldehyde dehydrogenase; KEGG: mbo:Mb0791 probable aldehyde dehydrogenase NAD dependant AldA (aldehyde dehydrogenase [NAD+]) YP_639174.1 PFAM: molybdopterin oxidoreductase molydopterin dinucleotide-binding region molybdopterin oxidoreductase Fe4S4 region; KEGG: sil:SPO1845 oxidoreductase, molybdopterin-binding YP_639175.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP3579c hypothetical protein YP_639176.1 PFAM: aminoglycoside phosphotransferase; SMART: Protein of unknown function DUF227; KEGG: mpa:MAP4313 hypothetical protein YP_639177.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mpa:MAP3587 hypothetical protein YP_639178.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP3579c hypothetical protein YP_639179.1 PFAM: cytochrome P450; KEGG: mpa:MAP2261c hypothetical protein YP_639180.1 KEGG: nfa:nfa5330 putative ferredoxin YP_639181.1 KEGG: mtc:MT2028 hypothetical protein YP_639182.1 KEGG: mpa:MAP3580c hypothetical protein YP_639183.1 PFAM: Senescence marker protein-30 (SMP-30)-like SMP-30/Gluconolaconase/LRE-like region; KEGG: mpa:MAP3581c hypothetical protein YP_639184.1 KEGG: mpa:MAP3589 hypothetical protein YP_639185.1 PFAM: cytochrome P450; KEGG: mpa:MAP3590 hypothetical protein YP_639186.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mpa:MAP3591 hypothetical protein YP_639187.1 PFAM: HpcH/HpaI aldolase; KEGG: mpa:MAP3592 probable 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YP_639188.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3593 hypothetical protein YP_639189.1 KEGG: mpa:MAP3594 hypothetical protein YP_639191.1 PFAM: aminoglycoside phosphotransferase; KEGG: mpa:MAP4310c hypothetical protein YP_639192.1 PFAM: Alpha/beta hydrolase fold-3; KEGG: mpa:MAP3595 hypothetical protein YP_639193.1 KEGG: mpa:MAP3582c hypothetical protein YP_639194.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP3585 hypothetical protein YP_639195.1 PFAM: luciferase-like; KEGG: nfa:nfa10300 putative monooxygenase YP_639196.1 PFAM: luciferase-like; KEGG: mpa:MAP3584 hypothetical protein YP_639197.1 PFAM: protein of unknown function DUF427; KEGG: mpa:MAP3586c hypothetical protein YP_639198.1 PFAM: protein of unknown function UPF0089; KEGG: mpa:MAP3657 hypothetical protein YP_639199.1 PFAM: FAD linked oxidase-like; KEGG: mbo:Mb0166 putative oxidoreductase YP_639200.1 KEGG: mpa:MAP0726 hypothetical protein YP_639201.1 KEGG: mtu:Rv2876 possible conserved transmembrane protein YP_639202.1 PFAM: DNA photolyase, FAD-binding DNA photolyase-like; KEGG: mpa:MAP3081 deoxyribodipyrimidine photo-lyase YP_639203.1 PFAM: polysaccharide deacetylase; KEGG: nfa:nfa52360 hypothetical protein YP_639204.1 PFAM: beta-Ig-H3/fasciclin; KEGG: mbo:Mb2898 cell surface lipoprotein MPB83 (lipoprotein P23) YP_639205.1 PFAM: beta-Ig-H3/fasciclin; KEGG: mbo:Mb2898 cell surface lipoprotein MPB83 (lipoprotein P23) YP_639206.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_639207.1 PFAM: peptidase M50; SMART: PDZ/DHR/GLGF; KEGG: mbo:Mb2894c probable conserved transmembrane protein YP_639208.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_639209.1 PFAM: GCN5-related N-acetyltransferase FR47-like; KEGG: mbo:Mb2892c hypothetical protein YP_639210.1 KEGG: mpa:MAP4196 hypothetical protein YP_639211.1 PFAM: penicillin-binding protein, transpeptidase NTF2-like N-terminal transpeptidase; KEGG: mtc:MT2933 penicillin-binding protein, putative YP_639212.1 PFAM: protein of unknown function DUF1707; KEGG: mpa:MAP2935c hypothetical protein YP_639213.1 TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: thioesterase superfamily; KEGG: mpa:MAP2356 hypothetical protein YP_639214.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential YP_639215.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation YP_639217.1 KEGG: mpa:MAP2932c hypothetical protein YP_639218.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpa:MAP1422 hypothetical protein YP_639219.1 KEGG: mpa:MAP1421 asparagine synthetase, glutamine-hydrolyzing; TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; PFAM: glutamine amidotransferase, class-II asparagine synthase YP_639220.1 PFAM: amino acid permease-associated region; KEGG: atc:AGR_C_3885 hypothetical protein YP_639221.1 PFAM: glutamine synthetase, catalytic region; KEGG: mbo:Mb2885c probable glutamine synthetase GlnA4 (glutamine synthase) (GS-II) YP_639222.1 PFAM: glutamine amidotransferase class-I peptidase C26; KEGG: mle:ML1573 possible amidotransferase YP_639223.1 PFAM: aldehyde dehydrogenase; KEGG: mbo:Mb2883c probable aldehyde dehydrogenase AldC YP_639224.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mbo:Mb2882c short chain dehydrogenase YP_639225.1 PFAM: regulatory protein GntR, HTH protein of unknown function UPF0074 GntR-like Helix-turn-helix, type 11; KEGG: sma:SAV6724 putative GntR-family transcriptional regulator YP_639226.1 PFAM: regulatory protein, ArsR PaaX-like; KEGG: sma:SAV2332 putative ArsR-family transcriptional regulator YP_639227.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: sco:SCO3159 putative membrane protein YP_639228.1 KEGG: sco:SCO3159 putative membrane protein YP_639229.1 TIGRFAM: Cobalt ABC transporter CbiQ, permease subunit; PFAM: cobalt transport protein; KEGG: sma:SAV3607 putative integral membrane transport protein YP_639230.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: sma:SAV3608 putative ABC transporter ATP-binding protein YP_639231.1 catalyzes the reduction of mycothione or glutathione to mycothione or glutathione disulfide YP_639232.1 KEGG: mbo:Mb2879 hypothetical protein YP_639233.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate YP_639234.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpa:MAP2920c hypothetical protein YP_639235.1 PFAM: magnesium chelatase, ChlI subunit von Willebrand factor, type A ATPase associated with various cellular activities, AAA_5; SMART: ATPase; KEGG: mpa:MAP2919c magnesium chelatase, putative YP_639236.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide YP_639237.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid YP_639238.1 TIGRFAM: uroporphyrin-III C-methyltransferase siroheme synthase, N-terminal domain; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mpa:MAP2916c uroporphyrin-III C-methyltransferase / precorrin-2 oxidase / ferrochelatase YP_639239.1 PFAM: major facilitator superfamily MFS_1; KEGG: mtc:MT2912 efflux protein YP_639240.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_639241.1 KEGG: mbo:Mb2869 conserved hypothetical alanine rich protein YP_639242.1 KEGG: mpa:MAP2911 hypothetical protein YP_639243.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins YP_639244.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination YP_639245.1 PFAM: protein of unknown function DUF448; KEGG: mpa:MAP2908c hypothetical protein YP_639246.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex YP_639247.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock YP_639248.1 PFAM: phosphoesterase, RecJ-like phosphoesterase, DHHA1; KEGG: mbo:Mb2862c hypothetical protein YP_639249.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mtc:MT2902 DNA-damage-inducible protein F, putative YP_639250.1 PFAM: UbiE/COQ5 methyltransferase Methyltransferase type 11 Methyltransferase type 12; KEGG: hch:HCH_06592 SAM-dependent methyltransferase YP_639251.1 PFAM: regulatory protein, MerR; KEGG: mlo:mll5378 transcriptional regulator YP_639252.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_639253.1 KEGG: mtc:MT2896 hypothetical protein YP_639254.1 KEGG: mtc:MT2895.1 hypothetical protein YP_639255.1 PFAM: peptidase S15 X-Pro dipeptidyl-peptidase-like; KEGG: mbo:Mb2823 possible hydrolase YP_639256.1 KEGG: mbo:Mb2822 probable membrane protein YP_639257.1 PFAM: metallophosphoesterase; KEGG: mpa:MAP2900c hypothetical protein YP_639258.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: mbo:Mb2817c hypothetical protein YP_639259.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs YP_639260.1 PFAM: CBS; KEGG: ccr:CC2626 CBS domain protein YP_639261.1 PFAM: iron dependent repressor FeoA; KEGG: mtc:MT2858 iron repressor protein YP_639262.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities YP_639263.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_639264.1 KEGG: mpa:MAP2891c polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease RNA binding S1 KH, type 1; SMART: KH YP_639265.1 PFAM: peptidase M16-like; KEGG: mpa:MAP2890c putative zinc protease YP_639266.1 KEGG: reu:Reut_A1684 beta-lactamase; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: beta-lactamase YP_639267.1 PFAM: SEC-C motif; KEGG: nfa:nfa46450 hypothetical protein YP_639268.1 TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT-like; KEGG: mle:ML1532 L-alanine dehydrogenase YP_639269.1 PFAM: regulatory proteins, AsnC/Lrp; KEGG: mtc:MT2849 transcriptional regulator, AsnC family YP_639270.1 PFAM: protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mpa:MAP1884c hypothetical protein YP_639271.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_639272.1 PFAM: Tetratricopeptide TPR_2; KEGG: mpa:MAP2877c hypothetical protein YP_639273.1 KEGG: mle:ML1525 hypothetical protein YP_639274.1 KEGG: mtc:MT1812 hypothetical protein YP_639275.1 PFAM: dienelactone hydrolase; KEGG: mpa:MAP2870 hypothetical protein YP_639276.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived YP_639277.1 PFAM: dihydrofolate reductase region; KEGG: mle:ML1518 dihydrofolate reductase YP_639278.1 PFAM: protein of unknown function DUF1006; KEGG: mpa:MAP2866c hypothetical protein YP_639279.1 flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor YP_639280.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_639281.1 PFAM: beta-lactamase-like RNA-metabolising metallo-beta-lactamase; KEGG: mpa:MAP2863c hypothetical protein YP_639283.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_639284.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mpa:MAP2860 hypothetical protein YP_639285.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: mpa:MAP2859c Cell division protein YP_639286.1 catalyzes the conversion of l-glutamate to a-N-acetyl-l-glutamate in arginine biosynthesis YP_639287.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mpa:MAP2857c CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_639288.1 PFAM: CinA-like; KEGG: nfa:nfa38570 putative competence-damage inducible protein YP_639289.1 PFAM: helix-turn-helix motif; KEGG: mpa:MAP2856c hypothetical protein YP_639290.1 PFAM: PspA/IM30; KEGG: mtc:MT2815 cytoplasmic protein, 35 kDa YP_639291.1 KEGG: mbo:Mb2764c possible conserved membrane alanine rich protein YP_639292.1 PFAM: Limonene-1,2-epoxide hydrolase; KEGG: mpa:MAP2852 hypothetical protein YP_639293.1 PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; KEGG: mpa:MAP2851c hypothetical protein YP_639294.1 KEGG: mpa:MAP2850c hypothetical protein YP_639297.1 TIGRFAM: Hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein AIR synthase related protein-like; KEGG: fra:Francci3_1948 hydrogenase expression/formation protein HypE YP_639298.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: fra:Francci3_1947 hydrogenase expression/formation protein HypD YP_639299.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: sma:SAV7376 putative hydrogenase expression/formation protein YP_639300.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase SUA5/yciO/yrdC-like zinc finger, HypF; KEGG: fra:Francci3_1945 (NiFe) hydrogenase maturation protein HypF YP_639301.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: ava:Ava_4603 hydrogenase expression/formation protein (HUPF/HYPC) YP_639302.1 PFAM: peptidase M52, hydrogen uptake protein; KEGG: sma:SAV7372 hydrogenase-1 operon protein HyaD YP_639303.1 KEGG: fra:Francci3_1939 conserved hypothetical protein YP_639304.1 KEGG: sma:SAV7370 hypothetical protein YP_639305.1 KEGG: sma:SAV7369 hypothetical protein YP_639306.1 PFAM: nitrogen-fixing NifU-like Rieske [2Fe-2S] region; KEGG: ana:alr0692 similar to NifU protein YP_639307.1 PFAM: nickel-dependent hydrogenase, large subunit; KEGG: sma:SAV7367 putative cytochrome C3-like hydrogenase (NiFeSe) large chain YP_639308.1 PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: sma:SAV7366 putative cytochrome C3-like hydrogenase (NiFeSe) small chain YP_639309.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: rru:Rru_A1169 hydrogenase accessory protein HypB YP_639310.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis, HypA; KEGG: fra:Francci3_1937 hydrogenase expression/synthesis, HypA YP_639311.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs YP_639312.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities YP_639313.1 PFAM: regulatory protein, MarR; KEGG: nfa:nfa19460 putative transcriptional regulator YP_639314.1 KEGG: nfa:nfa19470 hypothetical protein YP_639316.1 PFAM: protein of unknown function DUF1622; KEGG: cvi:CV4273 hypothetical protein YP_639317.1 TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nfa:nfa38390 putative glutamate transporter permease protein YP_639318.1 TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nfa:nfa38380 putative glutamate transporter YP_639319.1 PFAM: extracellular solute-binding protein, family 3; SMART: Ionotropic glutamate receptor; KEGG: nfa:nfa38370 putative glutamate transporter glutamate-binding protein YP_639320.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: nfa:nfa38360 putative glutamate ABC transporter ATP-binding protein YP_639321.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_639322.1 KEGG: mbo:Mb2751c probable conserved transmembrane protein YP_639323.1 PFAM: protein of unknown function DUF349; KEGG: mpa:MAP2844 hypothetical protein YP_639324.1 KEGG: mpa:MAP2062 hypothetical protein YP_639325.1 KEGG: mbo:Mb2747c conserved hypothetical alanine rich protein YP_639326.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_639327.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate YP_639328.1 PFAM: GTP-binding protein, HSR1-related; KEGG: mbo:Mb2744c probable GTP-binding protein HflX YP_639329.1 PFAM: helicase-like DEAD/DEAH box helicase-like; KEGG: mpa:MAP1481c hypothetical protein YP_639330.1 TIGRFAM: Molybdopterin guanine dinucleotide-containing S/N-oxide reductase; PFAM: molybdopterin oxidoreductase molydopterin dinucleotide-binding region; KEGG: mbo:Mb1477 probable biotin sulfoxide reductase BisC (BDS reductase) (BSO reductase) YP_639331.1 PFAM: LGFP; KEGG: mbo:Mb2740c possible conserved transmembrane alanine and glycine rich protein YP_639332.1 Represses a number of genes involved in the response to DNA damage YP_639333.1 PFAM: Peptidoglycan-binding LysM; KEGG: mpa:MAP2835c hypothetical protein YP_639334.1 TIGRFAM: Ribonucleotide reductase regulator NrdR-like; PFAM: ATP-cone; KEGG: mpa:MAP2834c ATP-cone domain protein YP_639335.1 PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: mbo:Mb2735 hypothetical protein YP_639336.1 PFAM: alpha/beta hydrolase fold; KEGG: mbo:Mb2734 possible hydrolase YP_639337.1 PFAM: protein of unknown function DUF75; KEGG: mbo:Mb2733 conserved hypothetical alanine and leucine rich protein YP_639338.1 KEGG: nfa:nfa37820 hypothetical protein YP_639339.1 KEGG: mpa:MAP2828c hypothetical protein YP_639340.1 PFAM: iron dependent repressor FeoA; KEGG: mbo:Mb2730 iron-dependent repressor and activator IdeR YP_639341.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma factors in this cluster are active during stationary phase YP_639342.1 KEGG: mpa:MAP2825 hypothetical protein YP_639343.1 KEGG: mbo:Mb2727c hypothetical protein YP_639344.1 PFAM: ribonuclease BN; KEGG: mbo:Mb2726 probable conserved transmembrane alanine and leucine rich protein YP_639345.1 KEGG: mtc:MT2779 hypothetical protein YP_639346.1 PFAM: protein of unknown function DUF952; KEGG: nfa:nfa37630 hypothetical protein YP_639347.1 PFAM: Endoribonuclease L-PSP; KEGG: mbo:Mb2723 hypothetical protein YP_639348.1 PFAM: O-methyltransferase, family 2 Methyltransferase type 12; KEGG: syf:Synpcc7942_0499 hypothetical protein YP_639349.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released YP_639350.1 PFAM: ROK; KEGG: mpa:MAP2819 polyphosphate glucokinase YP_639351.1 PFAM: inositol monophosphatase; KEGG: mle:ML1024 putative myo-inositol-1(or 4)-monophosphatase YP_639352.1 KEGG: mpa:MAP2817 hypothetical protein YP_639353.1 KEGG: mbo:Mb2718c hypothetical protein YP_639354.1 KEGG: mbo:Mb2717 probable conserved alanine rich transmembrane protein YP_639355.1 catalyzes the formation of dUMP from dUTP YP_639356.1 KEGG: mpa:MAP2813c hypothetical protein YP_639357.1 KEGG: mle:ML1030 hypothetical protein YP_639358.1 PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: mpa:MAP2811c hypothetical protein YP_639359.1 KEGG: mbo:Mb2712c probable conserved integral membrane alanine and leucine rich protein YP_639360.1 PFAM: TrkA-N TrkA-C; KEGG: mpa:MAP2809 putative potassium transporter YP_639361.1 PFAM: TrkA-N; KEGG: mpa:MAP2808 probable potassium uptake protein YP_639362.1 PFAM: amino acid permease-associated region; KEGG: mpa:MAP2807c hypothetical protein YP_639363.1 PFAM: deoxyribonuclease/rho motif-related TRAM (Uracil-5)-methyltransferase; KEGG: mbo:Mb2708c conserved hypothetical alanine and valine and glycine rich protein YP_639364.1 KEGG: nfa:nfa37270 hypothetical protein YP_639365.1 PFAM: regulatory protein, MarR transcriptional regulator TrmB; KEGG: sma:SAV4542 hypothetical protein YP_639366.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: mbo:Mb2707c probable antibiotic-transport ATP-binding protein ABC transporter YP_639367.1 KEGG: mbo:Mb2706c probable antibiotic-transport integral membrane leucine and valine rich protein ABC transporter YP_639368.1 KEGG: mbo:Mb2705c probable antibiotic-transport integral membrane leucine and alanine and valine rich protein ABC transporter YP_639369.1 KEGG: sma:SAV4540 putative ABC transporter membrane protein YP_639370.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: sco:SCO3633 putative ABC transporter ATP-binding protein YP_639371.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH YP_639372.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_639373.1 KEGG: sma:SAV5826 hypothetical protein YP_639374.1 PFAM: HRDC 3'-5' exonuclease; KEGG: mtc:MT2755 ribonuclease D, putative YP_639375.1 KEGG: mbo:Mb2699 hypothetical protein YP_639376.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III YP_639377.1 catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX YP_639378.1 PFAM: Chlorite dismutase; KEGG: mpa:MAP2797c hypothetical protein YP_639379.1 TIGRFAM: GGDEF domain; PFAM: GGDEF EAL; KEGG: fra:Francci3_3740 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) YP_639380.1 PFAM: Methionine sulfoxide reductase B; KEGG: mpa:MAP2794 peptide methionine sulfoxide reductase YP_639381.1 KEGG: mbo:Mb2692 possible conserved integral membrane protein YP_639382.1 PFAM: alpha/beta hydrolase fold TAP-like protein; KEGG: mpa:MAP2792 hypothetical protein YP_639383.1 PFAM: bifunctional deaminase-reductase-like; KEGG: mpa:MAP2791 5-amino-6-(5-phosphoribosylamino)uracil reductase YP_639384.1 PFAM: AFG1-like ATPase; KEGG: mbo:Mb2689c hypothetical protein YP_639385.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nfa:nfa37300 putative acetyltransferase YP_639386.1 KEGG: mpa:MAP2788 hypothetical protein YP_639387.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase methylguanine DNA methyltransferase, ribonuclease-like; KEGG: fra:Francci3_0147 methylated-DNA--protein-cysteine methyltransferase YP_639388.1 PFAM: sigma-70 region 2 sigma-70 region 4 Sigma-70, region 4 type 2; KEGG: fra:Francci3_0148 sigma-24 YP_639389.1 PFAM: Clp, N terminal; KEGG: mbo:Mb2686 possible ATP-dependent protease ATP-binding subunit ClpX' YP_639390.1 KEGG: cef:CE1478 hypothetical protein YP_639391.1 PFAM: helix-turn-helix, AraC type; KEGG: mpa:MAP3230c hypothetical protein YP_639397.1 PFAM: protein of unknown function DUF322; KEGG: nfa:nfa23390 hypothetical protein YP_639398.1 KEGG: sil:SPOA0410 hypothetical protein YP_639399.1 KEGG: nfa:nfa23220 hypothetical protein YP_639400.1 PFAM: protein of unknown function DUF1469; KEGG: sco:SCO1911 integral membrane protein YP_639401.1 PFAM: GAF ANTAR; KEGG: mpa:MAP3264c hypothetical protein YP_639402.1 KEGG: nfa:nfa12090 hypothetical protein YP_639403.1 KEGG: mpa:MAP2721 hypothetical protein YP_639404.1 PFAM: thioesterase superfamily; KEGG: mpa:MAP2719c hypothetical protein YP_639405.1 TIGRFAM: conserved hypothetical protein; KEGG: nfa:nfa37140 hypothetical protein YP_639406.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_639407.1 PFAM: histidine triad (HIT) protein; KEGG: mpa:MAP2715c hypothetical protein YP_639408.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mbo:Mb2644c probable PI synthase PgsA1 (phosphatidylinositol synthase) (CDP-diacylglycerol--inositol3-phosphatidyltransferase) YP_639409.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA YP_639410.1 PFAM: glycosyl transferase, group 1; KEGG: mbo:Mb2642c alpha-mannosyltransferase PimA YP_639411.1 PFAM: NUDIX hydrolase; KEGG: mpa:MAP2711c hypothetical protein YP_639412.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate YP_639413.1 KEGG: mtc:MT2680 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase YP_639414.1 with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate YP_639415.1 PFAM: protein of unknown function DUF28; KEGG: mpa:MAP1030 hypothetical protein YP_639416.1 PFAM: Polyprenyl synthetase; KEGG: nfa:nfa17390 putative polyprenyl synthase YP_639417.1 PFAM: amino acid permease-associated region; KEGG: pfo:Pfl_1043 amino acid permease-associated region YP_639418.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bcl:ABC3532 3-oxoacyl-[acyl-carrier-protein] reductase YP_639419.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sco:SCO3502 3-oxoacyl-[acyl carrier protein] reductase YP_639420.1 TIGRFAM: agmatinase, putative; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: tfu:Tfu_0058 putative agmatinase YP_639421.1 PFAM: polysaccharide deacetylase; KEGG: sme:SMb21100 putative saccharide deacetylase, slightly similar to NodB protein YP_639422.1 PFAM: Rieske [2Fe-2S] region; KEGG: syf:Synpcc7942_2036 hypothetical protein YP_639423.1 PFAM: ferredoxin oxidoreductase FAD/NAD(P)-binding Oxidoreductase FAD-binding region; KEGG: sco:SCO2222 iron-sulfur oxidoreductase (secreted protein) YP_639424.1 PFAM: purine catabolism PurC-like; KEGG: tfu:Tfu_0691 helix-turn-helix, fis-type YP_639426.1 PFAM: Acetamidase/Formamidase; KEGG: cef:CE2198 putative formamidase YP_639427.1 PFAM: MscS Mechanosensitive ion channel; KEGG: fra:Francci3_0178 MscS mechanosensitive ion channel YP_639429.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity YP_639430.1 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_639431.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_639432.1 PFAM: fatty acid desaturase; KEGG: nfa:nfa12950 putative fatty acid desaturase YP_639433.1 PFAM: ferredoxin oxidoreductase FAD/NAD(P)-binding Oxidoreductase FAD-binding region; KEGG: nfa:nfa46020 putative oxidoreductase YP_639435.1 TIGRFAM: Thioester reductase; PFAM: AMP-dependent synthetase and ligase NAD-dependent epimerase/dehydratase phosphopantetheine-binding Male sterility-like; KEGG: mpa:MAP1040c FadD9 YP_639436.1 KEGG: nfa:nfa34320 hypothetical protein YP_639437.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation YP_639438.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate YP_639439.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex YP_639440.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane YP_639441.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF YP_639442.1 PFAM: extracellular solute-binding protein, family 5; KEGG: mbo:Mb2616c possible conserved lipoprotein YP_639443.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_639444.1 KEGG: mbo:Mb2614c probable GTP pyrophosphokinase RelA (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) (GTP diphosphokinase); TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT TGS metal-dependent phosphohydrolase, HD subdomain RelA/SpoT; SMART: Metal-dependent phosphohydrolase, HD region YP_639445.1 PFAM: ErfK/YbiS/YcfS/YnhG; KEGG: mpa:MAP1670c LppS_1 YP_639446.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: mbo:Mb2613 probable peptidyl-prolyl CIS-trans isomerase B PpiB (cyclophilin) (PPIase) (rotamase) (peptidylprolyl isomerase) YP_639447.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: mpa:MAP1050c peptidyl-prolyl cis-trans isomerase YP_639448.1 PFAM: beta-lactamase-like; KEGG: mpa:MAP1051 hypothetical protein YP_639449.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_639450.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mtc:MT3829 zinc-binding dehydrogenase YP_639451.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: nfa:nfa52580 putative ABC transporter ATP-binding protein YP_639452.1 PFAM: ABC transporter related; KEGG: nfa:nfa52570 putative ABC transporter ATP-binding protein YP_639453.1 PFAM: inner-membrane translocator; KEGG: nfa:nfa52560 putative branched-chain amino acid transporter YP_639454.1 PFAM: inner-membrane translocator; KEGG: nfa:nfa52550 putative branched-chain amino acid transporter YP_639455.1 PFAM: Extracellular ligand-binding receptor; KEGG: nfa:nfa52540 hypothetical protein YP_639456.1 KEGG: mbo:Mb2606c possible conserved membrane protein YP_639457.1 PFAM: thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate enzyme, central region thiamine pyrophosphate enzyme-like TPP binding region; KEGG: rpa:RPA0108 possible benzaldehyde lyase YP_639458.1 PFAM: transcriptional regulator PadR-like; SMART: regulatory proteins, IclR; KEGG: mpa:MAP2775 hypothetical protein YP_639459.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: cjk:jk1955 cold shock proteins YP_639460.1 PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; KEGG: mpa:MAP1054 hypothetical protein YP_639461.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP2362c hypothetical protein YP_639462.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP2363c hypothetical protein YP_639463.1 PFAM: amidohydrolase 2; KEGG: mpa:MAP2357 hypothetical protein YP_639464.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP2356 hypothetical protein YP_639465.1 KEGG: mpa:MAP3583 hypothetical protein YP_639466.1 KEGG: nfa:nfa16030 hypothetical protein YP_639467.1 PFAM: protein of unknown function DUF885; KEGG: cdi:DIP0126 hypothetical protein YP_639468.1 PFAM: protein of unknown function, zinc metallopeptidase putative; KEGG: mpa:MAP1060c hypothetical protein YP_639469.1 PFAM: Carboxylesterase, type B; KEGG: nfa:nfa46420 putative carboxylesterase YP_639470.1 KEGG: mpa:MAP1061c hypothetical protein YP_639471.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis YP_639472.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes YP_639473.1 KEGG: mpa:MAP3849 hypothetical protein YP_639475.1 KEGG: mpa:MAP3848 hypothetical protein YP_639476.1 PFAM: Polyprenyl synthetase; KEGG: mpa:MAP3846 IdsA YP_639477.1 KEGG: mpa:MAP3845 hypothetical protein YP_639478.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase GAF; SMART: ATPase; KEGG: mpa:MAP3844 hypothetical protein YP_639479.1 PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mpa:MAP1065 hypothetical protein YP_639480.1 KEGG: ade:Adeh_3870 hypothetical protein YP_639481.1 PFAM: Thiolase; KEGG: mpa:MAP3337 acetyl-CoA acyltransferase YP_639482.1 PFAM: helix-turn-helix, HxlR type; KEGG: mpa:MAP3336c hypothetical protein YP_639483.1 PFAM: conserved hypothetical protein 341; KEGG: sco:SCO4737 integral membrane protein YP_639484.1 PFAM: transglutaminase-like transglutaminase-like-like; KEGG: mtu:Rv2566 long conserved hypothetical protein YP_639485.1 PFAM: protein of unknown function DUF403 protein of unknown function DUF404 protein of unknown function DUF407; KEGG: mbo:Mb2597 conserved hypothetical alanine and leucine rich protein YP_639486.1 PFAM: transglutaminase-like transglutaminase-like-like; KEGG: mbo:Mb2599c hypothetical protein YP_639487.1 KEGG: mpa:MAP1069 hypothetical protein YP_639488.1 KEGG: mbo:Mb2059c hypothetical protein YP_639489.1 PFAM: magnesium chelatase, ChlI subunit AAA ATPase, central region ATPase associated with various cellular activities, AAA_5; SMART: ATPase; KEGG: mpa:MAP1072 putative ATPase YP_639490.1 PFAM: regulatory protein, ArsR; KEGG: lxx:Lxx13405 transcriptional regulator, ArsR family YP_639491.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: mma:MM0500 hypothetical protein YP_639492.1 PFAM: chalcone and stilbene synthases-like Chalcone and stilbene synthases-like 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; KEGG: mpa:MAP2642 hypothetical protein YP_639493.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: mbo:Mb1171c hypothetical protein YP_639494.1 PFAM: MMPL; KEGG: mbo:Mb1177 probable conserved transmembrane transport protein MmpL13 YP_639496.1 KEGG: sma:SAV693 hypothetical protein YP_639497.1 PFAM: cyclase/dehydrase; KEGG: sco:SCO3688 hypothetical protein YP_639498.1 similar to the gas vesicle synthesis protein GvpA in other bacteria but contains an extended C-terminal tail; function in the Streptomyces group is unknown but they contain several homologs of other gas vesicle synthesis proteins YP_639499.1 PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: sma:SAV1888 putative gas vesicle synthesis protein YP_639500.1 KEGG: sma:SAV2353 putative gas vesicle synthesis protein YP_639501.1 PFAM: Gas vesicle synthesis; KEGG: sco:SCO6499 gas vesicle synthesis protein YP_639502.1 PFAM: gas vesicle protein GVPa; KEGG: sma:SAV2350 putative gas vesicle synthesis protein YP_639503.1 PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: sma:SAV1883 putative gas vesicle synthesis protein YP_639504.1 PFAM: gas vesicle protein GVPa; KEGG: sma:SAV592 putative gas vesicle synthesis protein YP_639505.1 PFAM: Gas vesicle K; KEGG: sco:SCO6508 gas vesicle synthesis protein YP_639506.1 converts medium- to long-chain aliphatic fatty acids into acyl adenylate; involved in mycobactin synthesis YP_639507.1 KEGG: sma:SAV1225 putative transglycosylase associated protein YP_639508.1 KEGG: mbo:Mb2587 hypothetical protein YP_639509.1 PFAM: protein of unknown function UPF0047; KEGG: mpa:MAP1076 hypothetical protein YP_639510.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_639511.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function YP_639512.1 PFAM: aminodeoxychorismate lyase; KEGG: mpa:MAP1079 hypothetical protein YP_639513.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate YP_639514.1 PFAM: peptidase A24A, prepilin type IV; KEGG: mbo:Mb2581c hypothetical protein YP_639515.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: sme:SMb20388 putative NADPH:quinone oxidoreductase protein YP_639516.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_639517.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis YP_639518.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis YP_639519.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_639520.1 KEGG: mpa:MAP1095c hypothetical protein YP_639521.1 PFAM: peptidase M24; KEGG: mbo:Mb2564c putative cytoplasmic peptidase PepQ YP_639522.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_639523.1 Regulates rRNA biosynthesis by transcriptional antitermination YP_639524.1 PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: nfa:nfa36380 putative monooxygenase YP_639525.1 PFAM: beta-lactamase; KEGG: mtc:MT1414 transesterase YP_639526.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity YP_639527.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_639528.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis YP_639529.1 KEGG: mbo:Mb1417 probable export or membrane protein YP_639530.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers YP_639531.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity YP_639532.1 type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase YP_639533.1 KEGG: mpa:MAP1122 MIHF YP_639534.1 Essential for recycling GMP and indirectly, cGMP YP_639535.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits YP_639536.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine YP_639537.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_639538.1 KEGG: mpa:MAP1127c hypothetical protein YP_639539.1 PFAM: regulatory protein, TetR; KEGG: ade:Adeh_2298 putative transcriptional regulator, TetR family YP_639540.1 PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase Male sterility-like; KEGG: ade:Adeh_2299 NAD-dependent epimerase/dehydratase YP_639541.1 PFAM: Alpha/beta hydrolase fold-3; KEGG: mbo:Mb1435c probable lipase LipH YP_639542.1 PFAM: YhhN-like; KEGG: mtc:MT1445 hypothetical protein YP_639543.1 PFAM: Acetamidase/Formamidase; KEGG: cef:CE2517 hypothetical protein YP_639544.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity YP_639545.1 KEGG: sme:SMc00852 hypothetical transmembrane signal peptide protein YP_639546.1 PFAM: LemA; KEGG: tws:TW012 conserved hypothetical membrane protein YP_639547.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth YP_639548.1 PFAM: Fmu (Sun) NusB/RsmB/TIM44; KEGG: mpa:MAP1134 sun protein YP_639549.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate YP_639550.1 KEGG: mpa:MAP1136 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding bifunctional deaminase-reductase-like YP_639551.1 PFAM: major facilitator superfamily MFS_1; KEGG: mbo:Mb1445c aminoglycosides/tetracycline-transport integral membrane protein YP_639552.1 PFAM: protein of unknown function DUF1396; KEGG: mpa:MAP1138c LprG YP_639553.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine YP_639554.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate YP_639555.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not YP_639556.1 KEGG: mpa:MAP1142 hypothetical protein YP_639557.1 PFAM: GCN5-related N-acetyltransferase FR47-like; KEGG: rso:RS03701 probable acetyltransferase protein YP_639558.1 PFAM: gamma-glutamyltranspeptidase; KEGG: mbo:Mb2415 probable gamma-glutamyltranspeptidase precursor GgtB (gamma-glutamyltransferase) (glutamyl transpeptidase) YP_639559.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_639560.1 PFAM: Uncharacterised P-loop ATPase protein UPF0042; KEGG: mpa:MAP1147 hypothetical protein YP_639561.1 TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function UPF0052 and CofD; KEGG: mtc:MT1465 hypothetical protein YP_639562.1 PFAM: protein of unknown function DUF199; KEGG: mpa:MAP1149 hypothetical protein YP_639563.1 PFAM: regulatory protein, TetR; KEGG: pfl:PFL_3261 transcriptional regulator, TetR family YP_639564.1 PFAM: major facilitator superfamily MFS_1; KEGG: oih:OB0290 hypothetical protein YP_639565.1 PFAM: HNH endonuclease protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mbo:Mb2038c hypothetical protein YP_639566.1 KEGG: mtc:MT2071 hypothetical protein YP_639567.1 SMART: extracellular solute-binding protein, family 3; KEGG: mma:MM1939 glutamine-binding protein YP_639568.1 KEGG: mpa:MAP1164 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_639569.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway YP_639570.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_639571.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: mbo:Mb1475 probable protein-export membrane protein SecG YP_639572.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate YP_639573.1 KEGG: mbo:Mb1479c hypothetical protein YP_639574.1 TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: mbo:Mb1480c 6-phosphogluconolactonase YP_639575.1 TIGRFAM: opcA protein; KEGG: mbo:Mb1481c putative OxpP cycle protein OpcA YP_639576.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_639577.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate YP_639578.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase YP_639579.1 converts protoheme IX and farnesyl diphosphate to heme O YP_639580.1 PFAM: Integrase, catalytic region; KEGG: mpa:MAP1048c hypothetical protein YP_639581.1 PFAM: ABC transporter related TOBE Transport-associated OB; SMART: ATPase; KEGG: sil:SPO0237 SN-glycerol-3-phosphate ABC transporter, ATP-binding protein YP_639582.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7265 ABC transporter, permease protein YP_639583.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yps:YPTB1914 ABC sugar (sorbitol/trehalose/maltose) transporter, permease subunit YP_639584.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rru:Rru_A1262 extracellular solute-binding protein, family 1 YP_639585.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rru:Rru_A1264 short-chain dehydrogenase/reductase SDR YP_639586.1 PFAM: carbohydrate kinase, FGGY; KEGG: rru:Rru_A1267 carbohydrate kinase, FGGY YP_639587.1 PFAM: photosystem I assembly BtpA; KEGG: stt:t1524 conserved hypothetical protein YP_639588.1 PFAM: inositol monophosphatase; KEGG: tfu:Tfu_1943 inositol-1(or 4)-monophosphatase YP_639589.1 PFAM: regulatory protein, DeoR Helix-turn-helix, type 11; KEGG: tfu:Tfu_1854 regulatory protein, DeoR YP_639590.1 PFAM: Class I peptide chain release factor; KEGG: sco:SCO4278 hypothetical protein YP_639591.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mpa:MAP1180c quinone oxidoreductase YP_639592.1 KEGG: mbo:Mb1490 hypothetical protein YP_639593.1 PFAM: cytochrome oxidase assembly; KEGG: mpa:MAP1182c putative cytochrome aa3 controlling prrotein YP_639594.1 PFAM: regulatory protein, TetR; KEGG: fra:Francci3_0706 transcriptional regulator, TetR family YP_639596.1 TIGRFAM: ABC transporter, DrrB efflux protein; PFAM: ABC-2 type transporter; KEGG: mbo:Mb1492c probable unidentified antibiotic-transport integral membrane ABC transporter YP_639597.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: mpa:MAP1184c putative ABC-2 type transport system ATP-binding protein YP_639598.1 KEGG: mpa:MAP1185c hypothetical protein YP_639599.1 PFAM: regulatory protein, ArsR Helix-turn-helix, type 11; KEGG: mtc:MT1507 hypothetical protein YP_639600.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD; KEGG: nfa:nfa35600 hypothetical protein YP_639601.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD; KEGG: mpa:MAP1188 hypothetical protein YP_639602.1 KEGG: nfa:nfa35580 putative ABC transporter ATP-binding protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: ATPase YP_639603.1 TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; KEGG: mbo:Mb1499 probable cysteine desulfurase csd YP_639604.1 TIGRFAM: SUF system FeS assembly protein; PFAM: nitrogen-fixing NifU-like-like; KEGG: mpa:MAP1191 putative NifU protein YP_639605.1 PFAM: protein of unknown function DUF59; KEGG: mbo:Mb1501 hypothetical protein YP_639607.1 PFAM: Ankyrin; KEGG: cgb:cg2722 ankyrin-repeat containing protein YP_639608.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mpa:MAP1196 TrxB YP_639609.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_639610.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: mpa:MAP1198 hypothetical protein YP_639611.1 KEGG: mtc:MT1520 hypothetical protein YP_639612.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP1200c hypothetical protein YP_639613.1 Catalyzes the conversion of citrate to isocitrate YP_639614.1 KEGG: mbo:Mb1512 possible membrane protein YP_639615.1 PFAM: NLP/P60; KEGG: mpa:MAP1203 hypothetical protein YP_639616.1 PFAM: NLP/P60; KEGG: mbo:Mb1514 hypothetical invasion protein YP_639617.1 PFAM: ATPase associated with various cellular activities, AAA_3 ATPase associated with various cellular activities, AAA_5; KEGG: mpa:MAP1205 MoxR homolog YP_639618.1 KEGG: mpa:MAP1206 hypothetical protein YP_639619.1 PFAM: von Willebrand factor, type A; KEGG: mpa:MAP1207 hypothetical protein YP_639620.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1209 3-oxoacyl- [acyl-carrier protein] reductase YP_639621.1 Catalyzes a key regulatory step in fatty acid biosynthesis YP_639622.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic YP_639623.1 PFAM: FAD dependent oxidoreductase glycine cleavage T protein (aminomethyl transferase); KEGG: sma:SAV6951 putative sarcosine dehydrogenase YP_639624.1 catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids YP_639625.1 PFAM: Rieske [2Fe-2S] region; KEGG: sma:SAV6949 putative ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase YP_639626.1 PFAM: aldehyde dehydrogenase; KEGG: sma:SAV1622 putative glycine betaine aldehyde dehydrogenase YP_639627.1 PFAM: amino acid permease-associated region; KEGG: sma:SAV6947 putative amino acid permease YP_639628.1 PFAM: glucose-methanol-choline oxidoreductase GMC oxidoreductase; KEGG: sma:SAV6946 putative GMC-family oxidoreductase YP_639629.1 PFAM: cyclic nucleotide-binding CBS protein of unknown function DUF294, nucleotidyltransferase putative; KEGG: tth:TTC0465 cyclic nucleotide binding protein/2 cbs domains YP_639630.1 PFAM: regulatory protein, MarR regulatory proteins, IclR Helix-turn-helix, type 11; KEGG: sma:SAV6954 putative IclR-family transcriptional regulator YP_639631.1 PFAM: protein of unknown function DUF245-like protein of unknown function DUF275-like; KEGG: mpa:MAP1833c hypothetical protein YP_639632.1 KEGG: mbo:Mb3908 conserved hypothetical alanine rich protein YP_639633.1 KEGG: mtc:MT1129 hypothetical protein YP_639634.1 KEGG: mbo:Mb3909c hypothetical alanine and proline rich protein YP_639635.1 PFAM: HNH endonuclease protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mtc:MT2071 hypothetical protein YP_639636.1 KEGG: mpa:MAP1832c hypothetical protein YP_639637.1 KEGG: mpa:MAP1831c hypothetical protein YP_639638.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_639639.1 TIGRFAM: Sec-independent protein translocase TatC; PFAM: Sec-independent periplasmic protein translocase; KEGG: mpa:MAP1829c putative sec-independant protein translocase YP_639640.1 PFAM: helicase-like DEAD/DEAH box helicase-like DSH-like; KEGG: mtc:MT2153 ATP-dependent RNA helicase, DEAD/DEAH box family YP_639641.1 KEGG: mpa:MAP1826c hypothetical protein YP_639642.1 PFAM: 5'-3' exonuclease; SMART: Helix-hairpin-helix motif, class 2; KEGG: mpa:MAP1825 5'-3'-exonuclease, putative YP_639643.1 KEGG: mpa:MAP1747c hypothetical protein YP_639644.1 PFAM: peptidase M24; KEGG: mpa:MAP1823c putative dipeptidase YP_639645.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mpa:MAP1820 hypothetical protein YP_639646.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mtu:Rv2073c putative oxidoreductase YP_639647.1 KEGG: mpa:MAP1817c precorrin-6Y C5,15-methyltransferase / precorrin-8W decarboxylase; TIGRFAM: Precorrin-6y C5,15-methyltransferase, subunit CbiE; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_639648.1 KEGG: mpa:MAP1816c probable precorrin-4 c11-methyltransferase CobM; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_639649.1 CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6 YP_639650.1 PFAM: aminoglycoside phosphotransferase; SMART: Protein of unknown function DUF227; KEGG: mpa:MAP2412c hypothetical protein YP_639651.1 KEGG: mpa:MAP1812 precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase; TIGRFAM: precorrin-3B C17-methyltransferase precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_639652.1 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate YP_639653.1 TIGRFAM: Precorrin-3B synthase; PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like; KEGG: mbo:Mb2090 possible cobalamin biosynthesis protein CobG YP_639654.1 PFAM: cyclic nucleotide-binding; KEGG: sme:SMb21270 putative transcriptional regulator protein YP_639655.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: nfa:nfa32540 putative dioxygenase YP_639656.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nfa:nfa30820 putative transporter permease YP_639657.1 KEGG: nfa:nfa30810 putative ABC transporter ATP-binding protein; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit; PFAM: CBS ABC transporter related; SMART: ATPase YP_639658.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nfa:nfa30800 putative transporter YP_639659.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: nfa:nfa30790 putative transporter YP_639660.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism YP_639661.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mpa:MAP1804c hypothetical protein YP_639662.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mbo:Mb2087c hypothetical protein YP_639663.1 PFAM: dienelactone hydrolase; KEGG: mbo:Mb2080 carboxymethylenebutenolidase YP_639664.1 F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein YP_639665.1 PFAM: Amidohydrolase 3; KEGG: mpa:MAP1801c hypothetical protein YP_639666.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mpa:MAP1800c putative apolipoprotein N-acyltransferase YP_639667.1 PFAM: glycosyl transferase, family 2; KEGG: mbo:Mb2077c polyprenol-monophosphomannose synthase PPM1 YP_639668.1 KEGG: mbo:Mb2076 hypothetical protein YP_639669.1 KEGG: mpa:MAP1797c hypothetical protein YP_639670.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase-like DEAD/DEAH box helicase-like; KEGG: nfa:nfa2960 putative ATP-dependent DNA helicase YP_639671.1 PFAM: alpha/beta hydrolase fold transcriptional regulatory protein-like; KEGG: jan:Jann_1710 transcriptional regulator, CadC YP_639672.1 KEGG: sma:SAV6519 hypothetical protein YP_639673.1 KEGG: rpa:RPA2585 hypothetical protein YP_639674.1 KEGG: mpa:MAP1781 LppI YP_639675.1 PFAM: Carboxylesterase, type B; KEGG: mpa:MAP1780c carboxylesterase YP_639676.1 PFAM: aminoglycoside phosphotransferase; SMART: Protein of unknown function DUF227; KEGG: mpa:MAP1779c hypothetical protein YP_639677.1 PFAM: protein of unknown function UPF0060; KEGG: sco:SCO3297 putative membrane protein YP_639678.1 KEGG: sco:SCO0845 hypothetical protein YP_639679.1 KEGG: mpa:MAP0138c hypothetical protein YP_639680.1 PFAM: RDD; KEGG: nfa:nfa2680 hypothetical protein YP_639681.1 PFAM: DoxX; KEGG: mpa:MAP1775 hypothetical protein YP_639682.1 KEGG: mpa:MAP0381 hypothetical protein YP_639683.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: tfu:Tfu_1604 xylulokinase YP_639684.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP0150c putative acyl-CoA dehydrogenase YP_639685.1 PFAM: regulatory protein GntR, HTH GntR-like; KEGG: mta:Moth_1595 transcriptional regulator, GntR family YP_639686.1 KEGG: pfo:Pfl_0251 xenobiotic compound monooxygenase, DszA family, A subunit YP_639687.1 PFAM: Rhodanese-like; KEGG: nfa:nfa10240 putative thiosulfate sulfurtransferase YP_639688.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV2433 putative ABC transporter permease protein YP_639689.1 KEGG: sma:SAV2432 putative ABC transporter substrate-binding protein YP_639690.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: rpb:RPB_3335 ABC transporter related YP_639691.1 KEGG: nfa:nfa43450 hypothetical protein YP_639692.1 KEGG: nfa:nfa5300 hypothetical protein YP_639693.1 PFAM: carbohydrate kinase, FGGY; KEGG: sma:SAV1126 putative xylulose kinase YP_639694.1 PFAM: luciferase-like; KEGG: mpa:MAP2054c hypothetical protein YP_639695.1 PFAM: dihydrodipicolinate reductase homoserine dehydrogenase, NAD-binding; KEGG: mpa:MAP0870c hypothetical protein YP_639696.1 PFAM: cytochrome P450; KEGG: mpa:MAP2051c hypothetical protein YP_639697.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mpa:MAP0764 hypothetical protein YP_639698.1 PFAM: amidohydrolase 2; KEGG: mpa:MAP0722 hypothetical protein YP_639699.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ssc:397574 17beta-estradiol dehydrogenase YP_639700.1 KEGG: mpa:MAP2655 putative acyl-CoA dehydrogenase YP_639701.1 PFAM: von Willebrand factor, type A; KEGG: mpa:MAP2654c hypothetical protein YP_639702.1 PFAM: ATPase associated with various cellular activities, AAA_5 CbbQ/NirQ/NorQ-like; KEGG: mpa:MAP2653c NirQ YP_639703.1 KEGG: mpa:MAP2652c hypothetical protein YP_639704.1 KEGG: mpa:MAP2651c hypothetical protein YP_639705.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP2650c hypothetical protein YP_639706.1 PFAM: aldehyde dehydrogenase; KEGG: mpa:MAP2648c hypothetical protein YP_639707.1 PFAM: cytochrome P450; KEGG: mpa:MAP2649c hypothetical protein YP_639708.1 PFAM: cytochrome P450; KEGG: mpa:MAP0774c hypothetical protein YP_639709.1 PFAM: protein of unknown function UPF0089; KEGG: mpa:MAP3657 hypothetical protein YP_639710.1 PFAM: Integrase, catalytic region; KEGG: lxx:Lxx22450 transposase, undefined YP_639711.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mpa:MAP1160c hypothetical protein YP_639712.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP2658 hypothetical protein YP_639713.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1489c hypothetical protein YP_639714.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP2052c hypothetical protein YP_639715.1 KEGG: mpa:MAP2053 hypothetical protein YP_639716.1 PFAM: cytochrome P450; KEGG: mpa:MAP2051c hypothetical protein YP_639717.1 PFAM: putative sugar-binding region; KEGG: mlo:mll3409 transcriptional regulator YP_639718.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: psb:Psyr_2567 zinc-containing alcohol dehydrogenase superfamily YP_639719.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 1; KEGG: sme:SMc01628 putative periplasmic binding ABC transporter protein YP_639720.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01627 putative permease ABC transporter protein YP_639721.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7265 ABC transporter, permease protein YP_639722.1 PFAM: ABC transporter related TOBE Transport-associated OB; SMART: ATPase; KEGG: mlo:mlr7004 ABC transporter, ATP-binding protein YP_639723.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: sil:SPO0237 SN-glycerol-3-phosphate ABC transporter, ATP-binding protein YP_639724.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone YP_639725.1 TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family ribose 5-phosphate isomerase; PFAM: Ribose/galactose isomerase; KEGG: sco:SCO0579 putative ribose 5-phosphate isomerase YP_639727.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: ret:RHE_CH00255 probable permease protein YP_639728.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV2588 putative polyamine ABC-transporter integral membrane protein YP_639729.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO5669 putative polyamine ABC-transporter integral memb rane protein YP_639730.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 1; KEGG: sco:SCO5667 putative ABC-transporter polyamine-binding lipoprotein YP_639731.1 KEGG: tfu:Tfu_0280 spermidine/putrescine ABC transporter ATP-binding subunit; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit; PFAM: ABC transporter related Transport-associated OB; SMART: ATPase YP_639732.1 KEGG: mpa:MAP1495 hypothetical protein YP_639733.1 PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV1378 putative membrane transport protein YP_639734.1 PFAM: TspO/MBR-related protein; KEGG: ret:RHE_PE00375 tryptophan rich sensory protein YP_639735.1 KEGG: sma:SAV7227 hypothetical protein YP_639736.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: nfa:nfa18790 putative isocitrate dehydrogenase YP_639737.1 KEGG: reu:Reut_C5899 tartrate dehydrogenase; TIGRFAM: Tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_639738.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter Citrate transporter; KEGG: dps:DP0767 similar to Na/dicarboxylate cotransporter YP_639739.1 KEGG: nfa:nfa49850 hypothetical protein YP_639741.1 KEGG: nfa:nfa1060 hypothetical protein YP_639742.1 PFAM: regulatory protein, MarR; KEGG: nfa:nfa38090 putative transcriptional regulator YP_639743.1 KEGG: mpa:MAP1746c hypothetical protein YP_639744.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: nfa:nfa43420 hypothetical protein YP_639745.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein-like HI0933-like protein FAD dependent oxidoreductase FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nfa:nfa43410 hypothetical protein YP_639746.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: fra:Francci3_0249 ABC transporter related YP_639747.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV1558 putative ABC transporter transmembrane subunit, permease YP_639748.1 KEGG: nfa:nfa43430 hypothetical protein YP_639749.1 TIGRFAM: Uncharacterised peroxidase-related; KEGG: atc:AGR_pTi_134 hypothetical protein YP_639750.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: bja:bll1384 probable oxidoreductase YP_639751.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mpa:MAP0745c putative 4-carboxymuconolactone decarboxylase YP_639753.1 KEGG: sma:SAV7430 putative integral membrane protein YP_639755.1 catalyzes the formation of L-tryptophan from indole and L-serine YP_639757.1 PFAM: transposase IS3/IS911; KEGG: mbo:Mb2839c probable transposase YP_639758.1 PFAM: Integrase, catalytic region; KEGG: mbo:Mb2838c probable transposase YP_639759.1 PFAM: Integrase, catalytic region; KEGG: xcv:XCVb0014 IS1477 transposase YP_639760.1 KEGG: bur:Bcep18194_C6595 hypothetical protein YP_639762.1 KEGG: sma:SAV157 hypothetical protein YP_639763.1 KEGG: sma:SAV158 hypothetical protein YP_639764.1 PFAM: phage integrase; KEGG: mpa:MAP2964c hypothetical protein YP_639765.1 KEGG: nwi:Nwi_2638 hypothetical protein YP_639766.1 PFAM: YaeQ; KEGG: eba:ebA6183 hypothetical protein YP_639768.1 KEGG: rsp:RSP_3020 hypothetical protein YP_639769.1 PFAM: Acyl-CoA dehydrogenase, type 2-like; KEGG: rsp:RSP_3018 putative acyl-CoA dehydrogenase YP_639770.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pai:PAE2688 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, conjectural YP_639771.1 activates fatty acids by binding to coenzyme A YP_639772.1 TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: thioesterase superfamily; KEGG: sco:SCO7470 putative phenylacetic acid degradation protein PaaI YP_639773.1 PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: nfa:nfa12120 putative transcriptional regulator YP_639774.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP1732c hypothetical protein YP_639775.1 KEGG: nfa:nfa27760 putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase YP_639776.1 TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nfa:nfa27760 putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase YP_639777.1 KEGG: nfa:nfa27770 putative 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase YP_639778.1 TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: gka:GK3032 dihydrodipicolinate synthase YP_639779.1 PFAM: fumarylacetoacetate (FAA) hydrolase Dimethylmenaquinone methyltransferase; KEGG: nfa:nfa27790 putative 4-hydroxyphenylacetate isomerase/decarboxylase YP_639780.1 PFAM: flavin reductase-like, FMN-binding; KEGG: nfa:nfa43660 putative phenol hydroxylase small subunit YP_639781.1 TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component; PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: gka:GK3034 4-hydroxyphenylacetate-3-hydroxylase YP_639782.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP1195c FadE15 YP_639783.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sco:SCO5097 short-chain oxidoreductase YP_639784.1 PFAM: regulatory protein, MerR; KEGG: fra:Francci3_1516 transcriptional regulator, MerR family YP_639785.1 PFAM: dienelactone hydrolase; KEGG: sco:SCO0254 hypothetical protein YP_639786.1 SMART: Helix-turn-helix type 3; KEGG: cgb:cg1527 hypothetical protein YP_639787.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: pae:PA3387 beta-ketoacyl reductase YP_639788.1 PFAM: regulatory protein, TetR; KEGG: sco:SCO4008 TetR family regulatory protein YP_639789.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_PE00378 probable dehydrogenase/reductase protein YP_639790.1 PFAM: Helix-turn-helix, type 11; KEGG: bte:BTH_I1262 hypothetical protein YP_639792.1 PFAM: glucose-methanol-choline oxidoreductase GMC oxidoreductase; KEGG: bbr:BB0111 putative dehydrogenase YP_639793.1 KEGG: mpa:MAP3756c hypothetical protein YP_639794.1 PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mpa:MAP1065 hypothetical protein YP_639795.1 KEGG: eli:ELI_12650 metal-dependent phosphohydrolase, HD subdomain YP_639796.1 KEGG: cgb:cg1741 hypothetical protein YP_639797.1 KEGG: sma:SAV5725 putative membrane protein YP_639798.1 PFAM: NIPSNAP; KEGG: nfa:nfa33320 hypothetical protein YP_639799.1 KEGG: nfa:nfa26390 hypothetical protein YP_639800.1 PFAM: regulatory protein, TetR; KEGG: sma:SAV5724 putative TetR-family transcriptional regulator YP_639801.1 PFAM: regulatory protein, MarR; KEGG: tfu:Tfu_0411 regulatory protein, MarR YP_639802.1 PFAM: bifunctional deaminase-reductase-like; KEGG: mlo:mlr2503 hypothetical protein YP_639803.1 PFAM: alpha/beta hydrolase fold; KEGG: ade:Adeh_2251 alpha/beta hydrolase fold-1 YP_639804.1 KEGG: nfa:nfa34320 hypothetical protein YP_639805.1 KEGG: cef:CE2686 hypothetical protein YP_639806.1 PFAM: sigma-70 region 3 sigma-70 region 2 sigma-70 region 4 Sigma-70, region 4 type 2; KEGG: nfa:nfa36050 putative sigma factor YP_639807.1 PFAM: regulatory protein, MarR; KEGG: mpa:MAP1131 hypothetical protein YP_639809.1 KEGG: nfa:nfa30190 hypothetical protein YP_639810.1 KEGG: mpa:MAP0778 hypothetical protein YP_639811.1 KEGG: nfa:nfa29810 hypothetical protein YP_639812.1 KEGG: cgb:cg2758 hypothetical protein YP_639813.1 PFAM: amino acid permease-associated region; KEGG: eli:ELI_04575 amino acid permease YP_639814.1 KEGG: nfa:nfa29810 hypothetical protein YP_639815.1 PFAM: protein of unknown function DUF326; KEGG: tfu:Tfu_1443 hypothetical protein YP_639816.1 PFAM: regulatory protein, TetR; KEGG: gvi:glr3170 TetR family transcriptional regulatory protein YP_639817.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pfo:Pfl_2468 short-chain dehydrogenase/reductase SDR YP_639818.1 PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: mpa:MAP1693c hypothetical protein YP_639819.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mpa:MAP2411 hypothetical protein YP_639820.1 PFAM: Acetamidase/Formamidase; KEGG: rpa:RPA2415 acetamidase/formamidase YP_639821.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpa:RPA2417 putative 3-ketoacyl-CoA reductase YP_639822.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: ret:RHE_CH00255 probable permease protein YP_639823.1 KEGG: mbo:Mb0374c hypothetical protein YP_639824.1 KEGG: mbo:Mb0373c hypothetical protein YP_639825.1 PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: tfu:Tfu_2841 putative rifampin monooxygenase YP_639826.1 PFAM: aldo/keto reductase; KEGG: pfo:Pfl_0252 aldo/keto reductase YP_639827.1 PFAM: RNA-binding S4; KEGG: tfu:Tfu_1642 RNA-binding S4 YP_639828.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP1681c hypothetical protein YP_639829.1 PFAM: Radical SAM; KEGG: sco:SCO7402 lyase YP_639830.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP2401 FadD35 YP_639831.1 PFAM: protein of unknown function DUF808; KEGG: mtc:MT3176.1 hypothetical protein YP_639832.1 KEGG: mpa:MAP3549 hypothetical protein YP_639833.1 KEGG: mpa:MAP3547c hypothetical protein YP_639834.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP3223c hypothetical protein YP_639835.1 KEGG: mbo:Mb1783c hypothetical protein YP_639836.1 PFAM: NLP/P60; KEGG: mbo:Mb1593c possible inv protein YP_639837.1 PFAM: Alcohol dehydrogenase, zinc-binding; KEGG: mpa:MAP3803 hypothetical protein YP_639838.1 PFAM: MOSC; KEGG: xcv:XCV1631 hypothetical protein YP_639839.1 KEGG: mpa:MAP1005 hypothetical protein YP_639841.1 KEGG: sma:SAV1106 hypothetical protein YP_639842.1 KEGG: osa:P0678F11.12 contains EST C73245(E3515) unknown protein YP_639843.1 PFAM: carboxyl transferase; KEGG: pae:PA1400 pyruvate carboxylase subunit A YP_639844.1 KEGG: mbo:Mb1573 hypothetical protein YP_639845.1 PFAM: ferric-uptake regulator; KEGG: mbo:Mb1944c ferric uptake regulation protein FurA (fur) YP_639846.1 KEGG: mpa:MAP1668c catalase-peroxidase; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase YP_639847.1 KEGG: sco:SCO4264 aminoglycoside phosphotransferase YP_639848.1 PFAM: lipolytic enzyme, G-D-S-L; KEGG: mpa:MAP4009 hypothetical protein YP_639849.1 PFAM: acyltransferase 3; KEGG: mtc:MT0538 acyltransferase, putative YP_639850.1 KEGG: mpa:MAP3163 hypothetical protein YP_639851.1 PFAM: response regulator receiver Stage II sporulation E; SMART: Protein phosphatase 2C-like; KEGG: sco:SCO0872 hypothetical protein YP_639852.1 PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like CHASE3; KEGG: mpa:MAP3390c hypothetical protein YP_639853.1 PFAM: response regulator receiver; KEGG: mpa:MAP3389c putative two-component system response regulator YP_639854.1 KEGG: mpa:MAP1806c hypothetical protein YP_639855.1 PFAM: regulatory protein, ArsR Activator of Hsp90 ATPase homologue 1-like; KEGG: nfa:nfa55010 putative transcriptional regulator YP_639856.1 KEGG: mpa:MAP2675c hypothetical protein YP_639857.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: nfa:nfa26840 hypothetical protein YP_639858.1 KEGG: sma:SAV349 hypothetical protein YP_639859.1 PFAM: protein of unknown function DUF328; KEGG: nfa:nfa40740 hypothetical protein YP_639860.1 KEGG: fra:Francci3_2566 conserved hypothetical protein YP_639861.1 PFAM: alpha/beta hydrolase fold; KEGG: rru:Rru_A1838 alpha/beta hydrolase fold YP_639862.1 PFAM: amidohydrolase 2; KEGG: mpa:MAP0677c hypothetical protein YP_639863.1 PFAM: helix-turn-helix, AraC type; KEGG: jan:Jann_1294 transcriptional regulator, AraC family YP_639864.1 KEGG: mtu:Rv2416c hypothetical protein YP_639865.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase Pyridoxal-dependent decarboxylase; KEGG: fra:Francci3_2867 pyridoxal-dependent decarboxylase YP_639866.1 KEGG: mpa:MAP0227c hypothetical protein YP_639867.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis YP_639868.1 PFAM: Amidase; KEGG: dra:DR0235 6-aminohexanoate-cyclic-dimer hydrolase YP_639869.1 PFAM: alpha/beta hydrolase fold; KEGG: mbo:Mb1223 hypothetical protein YP_639870.1 TIGRFAM: Competence-damaged protein; PFAM: molybdopterin binding domain CinA-like; KEGG: mtc:MT1952 competence/damage-inducible protein CinA YP_639871.1 KEGG: nfa:nfa20690 hypothetical protein YP_639873.1 KEGG: vvy:VVA0217 hypothetical protein YP_639874.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3577 FabG3_2 YP_639875.1 PFAM: oxidoreductase-like dihydrodipicolinate reductase; KEGG: mpa:MAP3576 hypothetical protein YP_639876.1 KEGG: nfa:nfa32150 putative histidine kinase YP_639877.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mpa:MAP4309 hypothetical protein YP_639879.1 TIGRFAM: HAD-superfamily hydrolase subfamily IB, PSPase-like HAD-superfamily subfamily IB, PSPase-like; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: mbo:Mb2508c possible transmembrane phospholipid biosynthesis bifunctionnal enzyme PlsC: putative L-3-phosphoserine phosphatase (O-phosphoserine phosphohydrolase) (PSP) (PSPase) + 1-acyl-SN-glycerol-3-phosphate acyltransferase (1-AGP acyltransferase) (1-AGPAT) (LYSOPH YP_639880.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mbo:Mb1927c hypothetical protein YP_639882.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: mbo:Mb2030c probable ferredoxin FdxA YP_639883.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb0202 putative transcriptional regulatory protein YP_639884.1 PFAM: molybdopterin oxidoreductase molydopterin dinucleotide-binding region molybdopterin oxidoreductase Fe4S4 region; KEGG: mbo:Mb0203 possible oxidoreductase YP_639885.1 KEGG: bba:Bd3745 hypothetical protein YP_639886.1 KEGG: mpa:MAP1614c putative cytochrome P450 YP_639887.1 KEGG: mbo:Mb1925 probable membrane protein YP_639888.1 PFAM: helix-turn-helix motif; KEGG: rpa:RPA3869 transcriptional regulator, XRE family YP_639889.1 KEGG: mpa:MAP0778 hypothetical protein YP_639890.1 PFAM: regulatory protein GntR, HTH GntR-like; KEGG: mbo:Mb0601 probable transcriptional regulatory protein (GntR-family) YP_639891.1 PFAM: fatty acid hydroxylase; KEGG: nfa:nfa1620 hypothetical protein YP_639892.1 PFAM: ErfK/YbiS/YcfS/YnhG; KEGG: mle:ML2664 possible secreted protein YP_639893.1 KEGG: sma:SAV4580 putative membrane protein YP_639894.1 PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: sco:SCO0821 putative threonine dehydratase YP_639895.1 KEGG: mpa:MAP0102 hypothetical protein YP_639896.1 PFAM: thioesterase superfamily; KEGG: pae:PA5329 hypothetical protein YP_639897.1 KEGG: fra:Francci3_0848 agmatinase, putative; TIGRFAM: agmatinase, putative; PFAM: Arginase/agmatinase/formiminoglutamase YP_639898.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase Methyltransferase type 11 Methyltransferase type 12; KEGG: mpa:MAP0135 cyclopropane-fatty-acyl-phospholipid synthase YP_639900.1 catalyzes the interconversion of chorismate to prephenate YP_639901.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mbo:Mb1914c short chain dehydrogenase YP_639902.1 PFAM: cyclase/dehydrase; KEGG: mpa:MAP1606c hypothetical protein YP_639903.1 KEGG: mpa:MAP1620 hypothetical protein YP_639904.1 KEGG: nfa:nfa35130 hypothetical protein YP_639905.1 PFAM: cytochrome P450; KEGG: mbo:Mb2289 probable cytochrome P450 124 CYP124 YP_639906.1 PFAM: FAD dependent oxidoreductase; KEGG: rso:RS01754 hypothetical signal peptide protein YP_639907.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa31030 putative transcriptional regulator YP_639908.1 KEGG: mpa:MAP0246c hypothetical protein YP_639909.1 TIGRFAM: HAD-superfamily hydrolase subfamily IA, variant 3 HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: mpa:MAP0382c hypothetical protein YP_639910.1 KEGG: ehi:18.t00040 C2 domain protein, putative Pfam: C2 PROSITE: GLN_RICH PRO_RICH C2_DOMAIN_2 YP_639911.1 PFAM: glycosyl transferase, group 1; KEGG: mpa:MAP2045 hypothetical protein YP_639912.1 PFAM: protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mpa:MAP2495 hypothetical protein YP_639913.1 PFAM: dienelactone hydrolase; KEGG: atc:AGR_C_1114 hypothetical protein YP_639914.1 KEGG: tfu:Tfu_1242 short chain dehydrogenase YP_639915.1 KEGG: mpa:MAP1478 hypothetical protein YP_639916.1 PFAM: protein of unknown function DUF1486 Limonene-1,2-epoxide hydrolase; KEGG: mpa:MAP1602c hypothetical protein YP_639917.1 PFAM: glutamine synthetase, catalytic region; KEGG: mtc:MT1927 glutamine synthetase, putative YP_639918.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mpa:MAP1597 hypothetical protein YP_639919.1 TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mpa:MAP1596 hypothetical protein YP_639920.1 TIGRFAM: bacterioferritin; PFAM: Ferritin and Dps; KEGG: mpa:MAP1595 bacterioferritin YP_639921.1 KEGG: mpa:MAP0781 FadD16 YP_639922.1 PFAM: BFD-like [2Fe-2S]-binding region; KEGG: mtc:MT1924.1 hypothetical protein YP_639923.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP1593 putative enoyl-CoA hydratase/isomerase YP_639924.1 KEGG: mpa:MAP1591 hypothetical protein YP_639925.1 KEGG: sma:SAV7228 hypothetical protein YP_639926.1 PFAM: thioesterase superfamily; KEGG: nfa:nfa33640 hypothetical protein YP_639927.1 PFAM: Amidase; KEGG: bja:bll1044 glutamyl-tRNA(Gln) amidotransferase YP_639928.1 PFAM: isochorismatase hydrolase; KEGG: bja:blr2725 hypothetical protein YP_639929.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: bja:blr2726 hypothetical protein YP_639930.1 PFAM: regulatory protein, TetR; KEGG: lpl:lp_1591 transcription regulator YP_639931.1 KEGG: sco:SCO7214 integral membrane protein YP_639932.1 PFAM: TPR repeat Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: sma:SAV806 hypothetical protein YP_639933.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: tfu:Tfu_1723 hypothetical protein YP_639934.1 PFAM: alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain; KEGG: mpa:MAP1587c hypothetical protein YP_639935.1 KEGG: mpa:MAP1586 hypothetical protein YP_639936.1 PFAM: putative esterase; KEGG: mbo:Mb0134c secreted antigen 85-C FbpC (85C) (antigen 85 complex C) (AG58C) (mycolyl transferase 85C) (fibronectin-binding protein C) YP_639938.1 KEGG: mpa:MAP1584c putative lon class III heat-shock ATP-dependent protease; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon-like AAA ATPase, central region ATPase associated with various cellular activities, AAA_3 ATPase associated with various cellular activities, AAA_5; SMART: ATPase YP_639939.1 KEGG: mpa:MAP1582c hypothetical protein YP_639940.1 KEGG: mpa:MAP1581c hypothetical protein YP_639941.1 PFAM: protein of unknown function DUF72; KEGG: mpa:MAP1580c hypothetical protein YP_639943.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sugar-binding transcriptional regulator, LacI family YP_639944.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sugar-binding transcriptional regulator, LacI family YP_639945.1 PFAM: inner-membrane translocator; KEGG: tte:TTE0764 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_639946.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: bha:BH3730 D-ribose transport system ATP-binding protein YP_639947.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: cme:CMA009C NAD-dependent sorbitol dehydrogenase YP_639948.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sme:SMc02037 putative oxidoreductase protein YP_639949.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: bsu:BG10177 sorbitol dehydrogenase YP_639950.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: ade:Adeh_3971 ribulose-phosphate 3-epimerase YP_639951.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: tfu:Tfu_1604 xylulokinase YP_639952.1 PFAM: sugar isomerase (SIS); KEGG: rba:RB9823 hypothetical protein YP_639953.1 PFAM: putative sugar-binding region; KEGG: sco:SCO1463 putative transcriptional regulator YP_639954.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: bms:BR1629 short chain dehydrogenase YP_639955.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_639956.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: mpa:MAP1573c putative phosphoketolase YP_639957.1 PFAM: Abortive infection protein; KEGG: mbo:Mb1894c probable conserved integral membrane protein YP_639959.1 PFAM: Fibronectin-attachment; KEGG: mbo:Mb1891 alanine and proline rich secreted protein APA YP_639960.1 PFAM: ABC transporter related TOBE; SMART: ATPase; KEGG: mpa:MAP1568 molybdate transport system ATP-binding protein YP_639961.1 TIGRFAM: NifC-like ABC-type porter Molybdate ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mbo:Mb1889 probable molbdenum-transport integral membrane protein ABC transporter ModB YP_639962.1 KEGG: mpa:MAP1564c short chain dehydrogenase YP_639963.1 PFAM: luciferase-like; KEGG: mpa:MAP1563c hypothetical protein YP_639964.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase FAD dependent oxidoreductase; KEGG: mtc:MT1902 NADH dehydrogenase YP_639965.1 KEGG: mtc:MT1901 putative urease accessory protein YP_639966.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein, P47K; KEGG: nfa:nfa25400 putative urease accessory protein YP_639967.1 KEGG: mbo:Mb1882 urease accessory protein UreF YP_639968.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_639969.1 KEGG: mbo:Mb1880 urease beta subunit UreB; TIGRFAM: urease, beta subunit; PFAM: Urease, beta subunit YP_639970.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter YP_639971.1 TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: thioesterase superfamily; KEGG: mpa:MAP1560 hypothetical protein YP_639972.1 KEGG: nfa:nfa25220 hypothetical protein YP_639973.1 PFAM: Penicillinase repressor; KEGG: mtc:MT1894 hypothetical protein YP_639974.1 PFAM: peptidase M48, Ste24p peptidase M56, BlaR1; KEGG: mbo:Mb1876c hypothetical protein YP_639975.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate YP_639976.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate YP_639977.1 PFAM: CBS protein of unknown function DUF21 transporter-associated region; KEGG: mtu:Rv1842c hypothetical protein YP_639978.1 PFAM: CBS protein of unknown function DUF21; KEGG: mbo:Mb1872c hypothetical protein YP_639979.1 KEGG: nfa:nfa25070 hypothetical protein YP_639980.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA YP_639981.1 KEGG: mpa:MAP1548c hypothetical protein YP_639983.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: nfa:nfa34500 putative short chain dehydrogenase YP_639984.1 PFAM: peptidase S15 X-Pro dipeptidyl-peptidase-like; KEGG: mbo:Mb1866c hypothetical protein YP_639985.1 KEGG: mpa:MAP3974c hypothetical protein YP_639986.1 KEGG: mpa:MAP3096 hypothetical protein YP_639987.1 KEGG: sma:SAV294 putative invasion protein YP_639988.1 PFAM: PE-PPE-like; KEGG: mbo:Mb1465 PE family protein YP_639989.1 KEGG: mpa:MAP2018c hypothetical protein YP_639990.1 PFAM: O-methyltransferase-like; KEGG: mlo:mll3178 hypothetical protein YP_639991.1 required for PDIM synthesis; phthiocerol and phthiodiolone dimycocerosate esters are scaffolds used for virulence-enhancing lipids; proposed to catalyze diesterification of phthiocerol and phthiodolone with mycocerosate; functions in polyketide synthesis YP_639992.1 TIGRFAM: daunorubicin resistance protein C; PFAM: ABC-2 type transporter; KEGG: nfa:nfa11080 putative ABC transporter membrane protein YP_639993.1 TIGRFAM: ABC transporter, DrrB efflux protein; PFAM: ABC-2 type transporter; KEGG: nfa:nfa11070 putative ABC transporter membrane protein YP_639994.1 KEGG: mle:ML2352 probable antibiotic resistance efflux protein; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: ATPase YP_639995.1 PFAM: beta-ketoacyl synthase acyl transferase region condensation domain phosphopantetheine-binding; KEGG: mbo:Mb2960 phenolpthiocerol synthesis type-I polyketide synthase PpsE YP_639996.1 PFAM: beta-ketoacyl synthase acyl transferase region short-chain dehydrogenase/reductase SDR; KEGG: mbo:Mb2957 phenolpthiocerol synthesis type-I polyketide synthase PpsB YP_639997.1 PFAM: beta-ketoacyl synthase acyl transferase region phosphopantetheine-binding; KEGG: mbo:Mb2958 phenolpthiocerol synthesis type-I polyketide synthase PpsC YP_639998.1 PFAM: beta-ketoacyl synthase acyl transferase region short-chain dehydrogenase/reductase SDR phosphopantetheine-binding; KEGG: mle:ML2356 polyketide synthase YP_639999.1 activates fatty acids by binding to coenzyme A YP_640001.1 PFAM: Thioesterase; KEGG: mbo:Mb2953 probable thioesterase TesA YP_640003.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine YP_640004.1 SMART: regulatory protein, MerR; KEGG: mpa:MAP1543 hypothetical protein YP_640005.1 PFAM: protein of unknown function DUF151; KEGG: mle:ML2074 hypothetical protein YP_640006.1 PFAM: regulatory protein, MerR; KEGG: mpa:MAP1541 hypothetical protein YP_640007.1 PFAM: Forkhead-associated; KEGG: mpa:MAP1540 hypothetical protein YP_640008.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor YP_640009.1 PFAM: protein of unknown function DUF881; KEGG: mbo:Mb1856 hypothetical protein YP_640010.1 PFAM: protein of unknown function DUF1290; KEGG: mpa:MAP1537 hypothetical protein YP_640011.1 PFAM: protein of unknown function DUF881; KEGG: mtc:MT1871 conserved hypothetical protein YP_640012.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mpa:MAP1535 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_640013.1 SecA2; functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond to SecA2; which is non-essential and seems to play a role in secretion of a subset of proteins YP_640014.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fra:Francci3_1854 GCN5-related N-acetyltransferase YP_640015.1 PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: ret:RHE_CH02034 probable monooxygenase protein YP_640016.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: mpa:MAP1531c hypothetical protein YP_640017.1 PFAM: ABC transporter related ABC transporter-like; SMART: ATPase; KEGG: mbo:Mb1850c probable drugs-transport transmembrane ATP-binding protein ABC transporter YP_640018.1 PFAM: HNH endonuclease protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mbo:Mb2126 hypothetical protein YP_640019.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein-like FAD dependent oxidoreductase; KEGG: mpa:MAP1530 hypothetical protein YP_640020.1 KEGG: mpa:MAP1529 hypothetical protein YP_640021.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP1528 hypothetical protein YP_640022.1 TIGRFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mpa:MAP1527c hypothetical protein YP_640023.1 KEGG: mpa:MAP1526 hypothetical protein YP_640024.1 PFAM: FAD dependent oxidoreductase; KEGG: sco:SCO5671 oxidoreductase YP_640025.1 PFAM: sodium/hydrogen exchanger; KEGG: mbo:Mb3264c probable conserved integral membrane transport protein YP_640026.1 PFAM: TrkA-C; KEGG: mbo:Mb3265c putative TrkA domain protein YP_640027.1 KEGG: mtc:MT1862 sterol desaturase-related protein YP_640028.1 PFAM: Carboxylesterase, type B; KEGG: mpa:MAP2689c putative carboxylesterase YP_640029.1 PFAM: small multidrug resistance protein; KEGG: tfu:Tfu_0987 small multidrug resistance protein, SMR family YP_640030.1 PFAM: small multidrug resistance protein; KEGG: nfa:nfa19760 putative multi-drug efflux transporter YP_640031.1 PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO7520 integral membrane protein YP_640032.1 KEGG: mpa:MAP1500c putative 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77 YP_640034.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa32490 putative short chain dehydrogenase YP_640036.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mpa:MAP1160c hypothetical protein YP_640037.1 KEGG: nfa:nfa30100 hypothetical protein YP_640038.1 PFAM: ferredoxin oxidoreductase FAD/NAD(P)-binding Oxidoreductase FAD-binding region; KEGG: nfa:nfa30090 putative iron-sulfur oxidoreductase YP_640040.1 PFAM: luciferase-like; KEGG: mpa:MAP1499c hypothetical protein YP_640041.1 KEGG: mpa:MAP1498c hypothetical protein YP_640042.1 PFAM: NUDIX hydrolase; KEGG: mpa:MAP0346c hypothetical protein YP_640043.1 KEGG: mpa:MAP0247c hypothetical protein YP_640044.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpa:MAP3265 hypothetical protein YP_640045.1 TIGRFAM: Peptidase C56, PfpI; PFAM: ThiJ/PfpI; KEGG: mpa:MAP0372 PfpI YP_640046.1 PFAM: Alpha/beta hydrolase fold-3; KEGG: reu:Reut_B5462 esterase/lipase/thioesterase YP_640047.1 PFAM: lipolytic enzyme, G-D-S-L; KEGG: mpa:MAP2739 hypothetical protein YP_640048.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase Methyltransferase type 11 Methyltransferase type 12; KEGG: mbo:Mb3424c cyclopropane-fatty-acyl-phospholipid synthase 1 CmaA1 (cyclopropane fatty acid synthase) (CFA synthase) (cyclopropane mycolic acid synthase 1) YP_640049.1 KEGG: mbo:Mb1809 hypothetical protein YP_640051.1 PFAM: nuclear transport factor 2; KEGG: mpa:MAP1773c hypothetical protein YP_640052.1 KEGG: mbo:Mb0321 hypothetical protein YP_640053.1 KEGG: mbo:Mb1924 hypothetical protein YP_640054.1 activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence YP_640055.1 PFAM: alpha/beta hydrolase fold; KEGG: sco:SCO3690 hydrolase YP_640056.1 PFAM: Stage II sporulation E PAS fold; SMART: PAS Protein phosphatase 2C-like; KEGG: sco:SCO3691 regulatory protein YP_640057.1 PFAM: AMP-dependent synthetase and ligase; KEGG: reu:Reut_B3514 AMP-dependent synthetase and ligase YP_640058.1 KEGG: mpa:MAP2947 hypothetical protein YP_640059.1 PFAM: SOUL heme-binding protein; KEGG: rpb:RPB_1935 SOUL heme-binding protein YP_640060.1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is a general stress response regulator; expressed in stationary phase and under nitrogen depletion and cold shock YP_640061.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mpa:MAP3405 hypothetical protein YP_640063.1 PFAM: glutamine cyclotransferase; KEGG: nfa:nfa6420 hypothetical protein YP_640065.1 PFAM: methyltransferase small Methyltransferase type 11 Methyltransferase type 12; KEGG: mpa:MAP1480 hypothetical protein YP_640066.1 KEGG: mpa:MAP3276c hypothetical protein YP_640067.1 KEGG: mbo:Mb1757c hypothetical protein YP_640068.1 PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: cgb:cg3285 putative two component response regulator YP_640069.1 PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: cgb:cg3284 probable two component sensor kinase YP_640070.1 PFAM: protein kinase; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: tfu:Tfu_3065 tyrosine protein kinase:serine/threonine protein kinase YP_640071.1 PFAM: Transglycosylase-like; KEGG: nfa:nfa45220 hypothetical protein YP_640073.1 PFAM: phage major capsid protein, HK97; KEGG: bca:BCE0400 phage major capsid protein, HK97 family YP_640076.1 PFAM: protein of unknown function DUF1483; KEGG: nfa:nfa15240 hypothetical protein YP_640077.1 PFAM: phage Terminase; KEGG: bpm:BURPS1710b_1642 phage terminase, large subunit, putative YP_640078.1 PFAM: HNH endonuclease; KEGG: rso:RSc3232 putative bacteriophage-related protein YP_640081.1 KEGG: chy:CHY_0837 DNA repair protein RadA domain protein YP_640086.1 PFAM: phage integrase; KEGG: mta:Moth_1796 phage integrase YP_640087.1 PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: sco:SCO0184 hypothetical protein YP_640088.1 PFAM: protein of unknown function DUF81; KEGG: mpa:MAP2743c hypothetical protein YP_640089.1 PFAM: protein of unknown function DUF81; KEGG: tfu:Tfu_1694 hypothetical protein YP_640090.1 synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_640091.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP YP_640092.1 TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 pseudouridine synthase; KEGG: mbo:Mb1738 pseudouridylate synthase YP_640093.1 PFAM: chromosome segregation and condensation protein ScpB; KEGG: mbo:Mb1737 putative segregation and condensation protein B YP_640094.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: mpa:MAP1411 putative segregation and condensation protein A YP_640095.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mtu:Rv1708 chromosome partitioning protein YP_640096.1 PFAM: MMPL; KEGG: mpa:MAP2635c hypothetical protein YP_640097.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase HI0933-like protein FAD dependent oxidoreductase; KEGG: sco:SCO4416 monooxygenase YP_640098.1 PFAM: aminotransferase, class I and II; KEGG: mpa:MAP4211 hypothetical protein YP_640099.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: mpa:MAP4210 hypothetical protein YP_640100.1 KEGG: mpa:MAP4209 hypothetical protein YP_640101.1 PFAM: thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate enzyme-like TPP binding region; KEGG: mpa:MAP4208 hypothetical protein YP_640103.1 PFAM: cytochrome P450; KEGG: nfa:nfa56380 cytochrome P450 monooxygenase YP_640104.1 PFAM: O-methyltransferase, family 2 Methyltransferase type 12; KEGG: bja:blr7665 putative methyltransferase YP_640105.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs YP_640106.1 PFAM: NUDIX hydrolase; KEGG: mtc:MT1739 MutT/NUDIX family protein YP_640107.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_640108.1 KEGG: mpa:MAP1405 hypothetical protein YP_640109.1 KEGG: mbo:Mb1723 hypothetical protein YP_640110.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_CH02714 putative glyoxalase/bleomycin resistance-like protein YP_640111.1 PFAM: regulatory protein, TetR; KEGG: fra:Francci3_3148 transcriptional regulator, TetR family YP_640112.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC protein-like; KEGG: mle:ML1360 recombination and DNA repair YP_640113.1 catalyzes the phosphorylation of NAD to NADP YP_640114.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ RNA-binding S4; KEGG: mpa:MAP1401 TlyA YP_640115.1 KEGG: mpa:MAP1400 hypothetical protein YP_640116.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: mpa:MAP1399 hypothetical protein YP_640117.1 KEGG: mpa:MAP1398 hypothetical protein YP_640118.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) YP_640119.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair YP_640120.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: mpa:MAP1393c probable conserved ATP-binding protein ABC transporter YP_640121.1 TIGRFAM: ABC transporter, DrrB efflux protein; PFAM: ABC-2 type transporter; KEGG: mtc:MT1726 antibiotic resistance ABC transporter, efflux protein YP_640122.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb1711c hypothetical protein YP_640123.1 PFAM: protein of unknown function DUF343; KEGG: mpa:MAP1390 hypothetical protein YP_640125.1 activates fatty acids by binding to coenzyme A YP_640126.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: sco:SCO3147 ABC transporter ATP-binding subunit YP_640127.1 PFAM: alpha/beta hydrolase fold; KEGG: tfu:Tfu_0267 conserved hypothetical protein YP_640128.1 catalyzes the formation of arginine from (N-L-arginino)succinate YP_640129.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming YP_640130.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes YP_640131.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation YP_640132.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine YP_640133.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate YP_640134.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate YP_640135.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate YP_640136.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily YP_640137.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_640138.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mtc:MT1685 purine cyclase-related protein YP_640139.1 KEGG: mpa:MAP1356c hypothetical protein YP_640140.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: nfa:nfa9280 putative acyl-CoA dehydrogenase YP_640141.1 PFAM: tRNA/rRNA methyltransferase (SpoU) RNA 2-O ribose methyltransferase, substrate binding; KEGG: mbo:Mb1671 possible 23S rRNA methyltransferase TsnR YP_640142.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_640143.1 PFAM: ribosomal protein L35; KEGG: mpa:MAP1353 50S ribosomal protein L35 YP_640144.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: mbo:Mb1668 probable initiation factor IF-3 InfC YP_640145.1 KEGG: nfa:nfa19120 hypothetical protein YP_640146.1 catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_640147.1 PFAM: putative esterase; KEGG: mpa:MAP1350c hypothetical protein YP_640148.1 KEGG: mbo:Mb1665c hypothetical protein YP_640149.1 KEGG: nfa:nfa18400 hypothetical protein YP_640150.1 PFAM: FAD dependent oxidoreductase FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nfa:nfa47010 putative monooxygenase YP_640151.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate YP_640152.1 PFAM: beta-lactamase-like; KEGG: mpa:MAP1340c hypothetical protein YP_640153.1 PFAM: protein of unknown function DUF427; KEGG: tel:tll2445 hypothetical protein YP_640154.1 PFAM: cytochrome P450; KEGG: mpa:MAP2015 putative cytochrome P-450 YP_640155.1 PFAM: UspA; KEGG: mbo:Mb1662 hypothetical protein YP_640156.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: nfa:nfa27290 DNA polymerase bacteriophage-type YP_640157.1 PFAM: acyl-CoA thioesterase; KEGG: mpa:MAP1729c hypothetical protein YP_640158.1 PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: mpa:MAP0153 hypothetical protein YP_640159.1 KEGG: cpv:cgd5_2180 hypothetical protein YP_640160.1 KEGG: plt:Plut_1030 hypothetical protein YP_640161.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mbo:Mb2674 cadmium inducible protein CadI YP_640162.1 PFAM: regulatory protein, ArsR; KEGG: nfa:nfa24530 putative transcriptional regulator YP_640163.1 PFAM: major facilitator superfamily MFS_1; KEGG: mbo:Mb1660 possible drug efflux membrane protein YP_640164.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_640165.1 PFAM: protein of unknown function DUF402; KEGG: mpa:MAP1330c hypothetical protein YP_640166.1 KEGG: mpa:MAP1327c hypothetical protein YP_640167.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; in Mycobacterium tuberculosis the C-terminal UPF0157 domain appears to be necessary for proper folding of the N-terminal domain YP_640168.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_640169.1 PFAM: regulatory protein, TetR; KEGG: sma:SAV5082 putative TetR-family transcriptional regulator YP_640170.1 PFAM: NmrA-like; KEGG: bld:BLi01955 YesF YP_640171.1 KEGG: sco:SCO7768 hypothetical protein YP_640172.1 KEGG: pac:PPA0540 hypothetical protein YP_640173.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bja:bll2528 RhtB family transporter YP_640174.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair YP_640175.1 PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: nfa:nfa18920 putative transcriptional regulator YP_640176.1 KEGG: nar:Saro_2859 hypothetical protein YP_640177.1 PFAM: protein of unknown function DUF35; KEGG: mpa:MAP1321c hypothetical protein YP_640178.1 KEGG: mbo:Mb1653c lipid-transfer protein YP_640179.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: nfa:nfa18740 putative branched-chain amino acid transporter ATP-binding protein YP_640180.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: nfa:nfa18740 putative branched-chain amino acid transporter ATP-binding protein YP_640181.1 PFAM: inner-membrane translocator; KEGG: nfa:nfa18730 putative branched-chain amino acid transporter component YP_640182.1 PFAM: inner-membrane translocator; KEGG: nfa:nfa18720 putative branched-chain amino acid transporter permease protein YP_640183.1 PFAM: Extracellular ligand-binding receptor; KEGG: nfa:nfa18710 putative transporter YP_640184.1 PFAM: response regulator receiver ANTAR; KEGG: mpa:MAP1319 response regulator NasT YP_640185.1 KEGG: sco:SCO7674 secreted metal-binding protein YP_640187.1 TIGRFAM: agmatinase, putative; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: tfu:Tfu_0058 putative agmatinase YP_640188.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mtc:MT1661 adenylate cyclase, putative YP_640189.1 PFAM: amine oxidase FAD dependent oxidoreductase; KEGG: sco:SCO7388 dehydrogenase YP_640190.1 KEGG: mpa:MAP1954c hypothetical protein YP_640191.1 PFAM: Ferritin and Dps; KEGG: pac:PPA2134 starvation-inducible DNA-binding protein or fine tangled pili major subunit YP_640192.1 KEGG: nfa:nfa54870 hypothetical protein YP_640193.1 PFAM: regulatory protein, LuxR response regulator receiver; KEGG: mpa:MAP3275 NarL_2 YP_640194.1 PFAM: ATP-binding region, ATPase-like; KEGG: mpa:MAP3274 hypothetical protein YP_640195.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: nfa:nfa18910 putative ABC transporter ATP-binding protein YP_640196.1 TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nfa:nfa18900 putative ABC transporter permease YP_640197.1 PFAM: extracellular solute-binding protein, family 3; KEGG: nfa:nfa18890 putative transporter substrate-binding protein YP_640198.1 PFAM: protein of unknown function DUF308, membrane; KEGG: mbo:Mb1650c probable conserved membrane protein YP_640199.1 PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: mpa:MAP1316c cytochrome bd-I oxidase subunit I YP_640200.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: mbo:Mb1648c probable integral membrane cytochrome D ubiquinol oxidase (subunit II) CydB (cytochrome BD-I oxidase subunit II) YP_640201.1 PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase; KEGG: mpa:MAP1314c ABC transporter, ATP-binding protein CydD YP_640202.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: mpa:MAP1313c putative ABC transporter ATP-binding protein YP_640203.1 KEGG: nfa:nfa56440 hypothetical protein YP_640204.1 PFAM: acyl-CoA thioesterase; KEGG: mpa:MAP1311 acyl-CoA thioesterase II YP_640205.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_640206.1 TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fra:Francci3_3012 glutamate synthases, NADH/NADPH, small subunit YP_640207.1 PFAM: glutamine amidotransferase, class-II glutamate synthase, alpha subunit-like ferredoxin-dependent glutamate synthase glutamate synthase; KEGG: fra:Francci3_3013 glutamate synthase (ferredoxin) YP_640208.1 KEGG: mle:ML1276 hypothetical protein YP_640209.1 PFAM: TM2; KEGG: mbo:Mb1641 hypothetical membrane protein YP_640210.1 PFAM: HNH endonuclease protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mtc:MT0350 hypothetical protein YP_640211.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mpa:MAP1308 prolipoprotein diacylglyceryl transferase YP_640212.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_640213.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_640214.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water YP_640215.1 TIGRFAM: Trp region conserved hypothetical membrane protein; KEGG: mbo:Mb1636 possible conserved membrane protein YP_640216.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine YP_640217.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Redoxin; KEGG: mpa:MAP1302c bacterioferritin comigratory protein YP_640218.1 PFAM: Alpha/beta hydrolase fold-3; KEGG: sma:SAV299 putative arylesterase/monoxygenase YP_640219.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers YP_640220.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_640221.1 PFAM: inositol monophosphatase; KEGG: mtc:MT1640 inositol monophosphatase family protein YP_640222.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide and the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)anthranilate; involved in histidine and tryptophan biosynthesis YP_640223.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_640224.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis YP_640225.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_640226.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_640227.1 PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mbo:Mb1624c hypothetical protein YP_640228.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: nfa:nfa31320 putative methionine aminopeptidase YP_640229.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide YP_640230.1 catalyzes the formation of oxaloacetate from L-aspartate YP_640231.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_640232.1 PFAM: NUDIX hydrolase; KEGG: mbo:Mb1619c hypothetical protein YP_640233.1 PFAM: secretory lipase; KEGG: mbo:Mb1618c hypothetical protein YP_640234.1 KEGG: mbo:Mb1617 probable transmembrane protein YP_640235.1 KEGG: mbo:Mb1616 hypothetical protein YP_640236.1 catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine YP_640237.1 PFAM: regulatory protein, TetR Tetracyclin repressor-like; KEGG: nfa:nfa18310 putative transcriptional regulator YP_640238.1 KEGG: mpa:MAP1277 hypothetical protein YP_640239.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium YP_640240.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine YP_640241.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate YP_640242.1 PFAM: acyltransferase 3; KEGG: mbo:Mb1592c hypothetical protein YP_640243.1 KEGG: mbo:Mb1591c maltooligosyltrehalose synthase TreX; TIGRFAM: Glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13-like alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain YP_640244.1 KEGG: mpa:MAP1269c putative maltooligosyl trehalose synthase; TIGRFAM: Malto-oligosyltrehalose synthase; PFAM: alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain YP_640245.1 KEGG: mpa:MAP1268c maltooligosyl trehalose trehalohydrolase; TIGRFAM: Malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase, family 13-like alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain YP_640246.1 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic YP_640247.1 PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mbo:Mb1584 hypothetical protein YP_640249.1 KEGG: atc:AGR_C_2823 hypothetical protein YP_640250.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase YP_640251.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb0149 probable transcriptional regulatory protein (possibly TetR-family) YP_640252.1 PFAM: sigma-70 region 2 Tetratricopeptide TPR_2; KEGG: nfa:nfa13920 putative sigma factor YP_640253.1 PFAM: DGPFAETKE; KEGG: nfa:nfa13930 hypothetical protein YP_640254.1 TIGRFAM: rarD protein; PFAM: protein of unknown function DUF6, transmembrane; KEGG: nfa:nfa17830 putative membrane protein YP_640255.1 KEGG: mpa:MAP1251 putative pseudouridylate synthase; TIGRFAM: Pseudouridine synthase, RluD; PFAM: RNA-binding S4 pseudouridine synthase YP_640256.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_640257.1 PFAM: Asparaginase/glutaminase; KEGG: mpa:MAP1249c L-asparaginase YP_640258.2 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_640259.1 PFAM: RNA-binding S4; KEGG: nfa:nfa1050 hypothetical protein YP_640260.1 PFAM: helix-turn-helix, HxlR type; KEGG: ccr:CC3112 hypothetical protein YP_640261.1 PFAM: Carotenoid oxygenase; KEGG: mtc:MT0938 dioxygenase, putative YP_640262.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_640263.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin) YP_640264.1 KEGG: mbo:Mb2960 phenolpthiocerol synthesis type-I polyketide synthase PpsE YP_640266.1 KEGG: mpa:MAP3436c hypothetical protein YP_640267.1 activates fatty acids by binding to coenzyme A YP_640268.1 KEGG: mpa:MAP1238c putative daunorubicin resistance transport system ATP-binding protein; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: ATPase YP_640269.1 PFAM: ABC-2 type transporter; KEGG: mpa:MAP1237c putative daunorubicin resistance transport system permease protein YP_640270.1 PFAM: ABC-2 type transporter; KEGG: mpa:MAP1236c putative daunorubicin resistance transport system permease protein YP_640273.1 PFAM: glycosyl transferase, family 2; KEGG: ana:all1737 probable glycosyl transferase YP_640274.1 PFAM: glycosyl transferase, family 2; KEGG: ret:RHE_CH03200 probable glycosyltransferase protein YP_640275.1 PFAM: polysaccharide pyruvyl transferase; KEGG: ret:RHE_CH03217 exopolysaccharide polymerization protein YP_640276.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: nfa:nfa54240 putative UDP-glucose 6-dehydrogenase YP_640277.1 TIGRFAM: Transport protein; PFAM: MMPL; KEGG: mbo:Mb3853c probable conserved integral membrane transport protein MmpL8 YP_640278.1 PFAM: glycosyl transferase, family 28; KEGG: mbo:Mb1551 probable glycosyltransferase YP_640279.1 KEGG: mpa:MAP3753 hypothetical protein YP_640280.1 KEGG: mpa:MAP3753 hypothetical protein YP_640281.1 PFAM: condensation domain; KEGG: mbo:Mb3850c possible conserved polyketide synthase associated protein PapA2 YP_640282.1 PFAM: beta-ketoacyl synthase acyl transferase region short-chain dehydrogenase/reductase SDR phosphopantetheine-binding Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mbo:Mb1554c probable polyketide synthase pks5 YP_640283.1 PFAM: beta-lactamase; KEGG: mtc:MT1974 esterase, putative YP_640284.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins YP_640285.1 MDM; functions in conversion of succinate to propionate YP_640286.1 KEGG: mbo:Mb1529 probable methylmalonyl-CoA mutase small subunit MutA (MCM); TIGRFAM: methylmalonyl-CoA mutase, small subunit; PFAM: methylmalonyl-CoA mutase YP_640287.1 KEGG: mpa:MAP1224c hypothetical protein YP_640288.1 KEGG: mbo:Mb1525 hypothetical protein YP_640289.1 PFAM: band 7 protein; KEGG: mpa:MAP1214 hypothetical protein YP_640290.1 PFAM: protein of unknown function DUF107; KEGG: mbo:Mb1523 hypothetical protein YP_640291.1 KEGG: mpa:MAP1212c hypothetical protein YP_640292.1 PFAM: 20S proteasome, A and B subunits; KEGG: mtc:MT2169 proteasome, alpha subunit YP_640293.1 PFAM: 20S proteasome, A and B subunits; KEGG: mpa:MAP1835c proteasome, beta subunit YP_640294.1 PFAM: protein of unknown function DUF245-like protein of unknown function DUF275-like; KEGG: mbo:Mb2136c hypothetical protein YP_640295.1 KEGG: mbo:Mb2139c probable ATPase; PFAM: AAA ATPase, central region; SMART: ATPase YP_640296.1 KEGG: mbo:Mb2397c low molecular weight antigen CFP2 (low molecular weight protein antigen 2) (CFP-2) YP_640297.1 KEGG: mpa:MAP1840 LppK YP_640298.1 PFAM: protein of unknown function DUF503; KEGG: mpa:MAP1841 hypothetical protein YP_640299.1 KEGG: mle:ML1313 putative protein-L-isoaspartate methyltransferase YP_640300.1 KEGG: mpa:MAP1843 putative RecB family exonuclease YP_640301.1 KEGG: mpa:MAP3580c hypothetical protein YP_640302.1 KEGG: nfa:nfa19130 hypothetical protein YP_640303.1 PFAM: regulatory protein, TetR Tetracyclin repressor-like; KEGG: nfa:nfa21420 putative transcriptional regulator YP_640304.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nfa:nfa52620 hypothetical protein YP_640305.1 Enables the enzymatic reduction of mercuric ions to elemental mercury YP_640306.1 KEGG: mbo:Mb2144c probable conserved integral membrane protein YP_640307.1 KEGG: mpa:MAP2147c hypothetical protein YP_640308.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors YP_640309.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis YP_640310.1 TIGRFAM: Sugar transporter; PFAM: General substrate transporter major facilitator superfamily MFS_1; KEGG: syn:sll0771 glucose transport protein YP_640311.1 TIGRFAM: HAD-superfamily hydrolase subfamily IA, variant 3 HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: nfa:nfa31900 putative hydrolase YP_640312.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity YP_640313.1 PFAM: protein of unknown function DUF75; KEGG: mpa:MAP1860 hypothetical protein YP_640314.1 PFAM: protein of unknown function DUF1214 protein of unknown function DUF1254; KEGG: bja:blr2659 hypothetical protein YP_640315.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mbo:Mb2153c short chain dehydrogenase YP_640316.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_640317.1 PFAM: inositol monophosphatase; KEGG: mbo:Mb2155c hypothetical protein YP_640318.1 PFAM: phosphatidylinositol 3- and 4-kinase, catalytic; KEGG: mpa:MAP1878c hypothetical protein YP_640319.1 KEGG: mpa:MAP1879c hypothetical protein YP_640320.1 PFAM: Phosphoglycerate mutase; KEGG: mpa:MAP1880c hypothetical protein YP_640321.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell YP_640322.1 KEGG: mbo:Mb2161c hypothetical protein YP_640323.1 KEGG: mtc:MT2196 lipoprotein, putative YP_640324.1 KEGG: mpa:MAP1882 hypothetical protein YP_640325.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_640326.1 TIGRFAM: YbhB and YbcL; PFAM: PEBP; KEGG: mpa:MAP1885c hypothetical protein YP_640327.1 PFAM: peptidase M20 peptidase dimerisation; KEGG: mpa:MAP1886c hypothetical protein YP_640328.1 PFAM: Recombinase; KEGG: nfa:nfa28840 putative recombinase YP_640329.1 KEGG: fra:Francci3_4273 putative plasmid replication initiator protein YP_640330.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase; KEGG: fra:Francci3_3398 cell divisionFtsK/SpoIIIE YP_640331.1 KEGG: sco:SCO3933 regulatory protein YP_640332.1 PFAM: helix-turn-helix motif; KEGG: sco:SCO5337 hypothetical protein YP_640333.1 PFAM: NUDIX hydrolase; KEGG: fra:Francci3_1135 NUDIX hydrolase YP_640334.1 TIGRFAM: uncharacterized domain HDIG; PFAM: metal-dependent phosphohydrolase, HD subdomain; KEGG: fra:Francci3_1134 metal dependent phosphohydrolase YP_640336.1 PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: ade:Adeh_2929 UBA/ThiF-type NAD/FAD binding protein YP_640337.1 KEGG: ret:RHE_CH01998 hypothetical protein YP_640338.1 PFAM: Patatin; KEGG: reu:Reut_C6025 patatin YP_640341.1 PFAM: Integrase, catalytic region; KEGG: lxx:Lxx04280 transposase, undefined YP_640342.1 PFAM: transposase IS3/IS911; KEGG: lxx:Lxx03690 transposase YP_640343.1 KEGG: mbo:Mb2838c probable transposase YP_640344.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP0913c acyl-CoA dehydrogenase YP_640345.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: nfa:nfa16040 putative dehydrogenase YP_640346.1 KEGG: gka:GK2773 hypothetical protein YP_640347.1 KEGG: ade:Adeh_1214 hypothetical protein YP_640348.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: nfa:nfa21770 putative acyl-CoA dehydrogenase YP_640349.1 activates fatty acids by binding to coenzyme A YP_640350.1 KEGG: eba:ebA2531 hypothetical protein YP_640351.1 PFAM: cytochrome P450; KEGG: mpa:MAP3109 probable cytochrome P450 136 CYP136 YP_640352.1 KEGG: nfa:nfa7130 putative monooxygenase YP_640353.1 PFAM: transposase IS3/IS911; KEGG: cef:CE1234 hypothetical protein YP_640354.1 PFAM: Integrase, catalytic region; KEGG: cef:CE1235 hypothetical protein YP_640355.1 KEGG: bur:Bcep18194_B1145 flavin-containing monooxygenase FMO YP_640356.1 PFAM: Alpha/beta hydrolase fold-3; KEGG: mpa:MAP2197 LipK YP_640357.1 KEGG: nfa:nfa10340 putative monooxygenase YP_640358.1 KEGG: nfa:nfa28620 putative monooxygenase YP_640359.1 KEGG: mpa:MAP2199 hypothetical protein YP_640360.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa28640 putative short chain dehydrogenase YP_640361.1 PFAM: regulatory protein, TetR; KEGG: sma:SAV151 putative TetR-family transcriptional regulator YP_640362.1 KEGG: bur:Bcep18194_B1143 metal-dependent hydrolase YP_640363.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa9340 putative transcriptional regulator YP_640364.1 PFAM: carboxyl transferase; KEGG: nfa:nfa53300 putative acetyl/propionyl-CoA carboxylase beta subunit YP_640365.1 PFAM: biotin/lipoyl attachment ATP-dependent carboxylate-amine ligase-like, ATP-grasp Carbamoyl-phosphate synthase L chain, ATP-binding Carbamoyl-phosphate synthetase large chain-like biotin carboxylase-like; KEGG: nfa:nfa53290 putative acetyl/propionyl-CoA carboxylase alpha subunit YP_640366.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP0910c acyl-CoA dehydrogenase YP_640367.1 TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: rpa:RPA0743 putative acid-CoA ligase YP_640368.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa50360 putative transcriptional regulator YP_640369.1 PFAM: protein of unknown function DUF1446; KEGG: mpa:MAP0914c hypothetical protein YP_640370.1 KEGG: nfa:nfa56200 hypothetical protein YP_640371.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bpa:BPP2728 putative carnitinyl-CoA dehydratase YP_640372.1 PFAM: MaoC-like dehydratase; KEGG: mpa:MAP2339c hypothetical protein YP_640373.1 KEGG: mpa:MAP2340c hypothetical protein YP_640374.1 PFAM: MaoC-like dehydratase; KEGG: ade:Adeh_4037 MaoC-like dehydratase YP_640375.1 PFAM: MaoC-like dehydratase; KEGG: rpb:RPB_4077 hypothetical protein YP_640376.1 PFAM: luciferase-like; KEGG: mbo:Mb1395 probable oxidoreductase YP_640377.1 PFAM: protein of unknown function DUF35; KEGG: bbr:BB4332 hypothetical protein YP_640378.1 KEGG: bpe:BP0636 hypothetical protein YP_640379.1 PFAM: helix-turn-helix, AraC type; KEGG: aci:ACIAD1455 putative transcriptional regulator protein (AraC family) YP_640380.1 PFAM: ferredoxin; KEGG: ccr:CC3524 ferredoxin, 2Fe-2S YP_640381.1 PFAM: cytochrome P450; KEGG: ccr:CC0063 cytochrome P450 family protein YP_640382.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbr:BB1107 ferredoxin reductase YP_640383.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb3277c possible transcriptional regulatory protein (probably TetR-family) YP_640384.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP2669 BpoB YP_640385.1 TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: thioesterase superfamily; KEGG: mag:amb3601 uncharacterized protein, possibly involved in aromatic compounds catabolism YP_640386.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0932c hypothetical protein YP_640387.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_640388.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mbo:Mb1557 probable alcohol dehydrogenase adh YP_640389.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mpa:MAP1243 hypothetical protein YP_640390.1 KEGG: mbo:Mb1679c PE-PGRS family protein YP_640391.1 PFAM: Integral membrane protein TerC; KEGG: nfa:nfa43750 putative transporter YP_640392.1 PFAM: oxidoreductase FAD/NAD(P)-binding FAD-binding molybdopterin oxidoreductase molydopterin dinucleotide-binding region molybdopterin oxidoreductase Fe4S4 region flavodoxin/nitric oxide synthase; KEGG: nfa:nfa51300 hypothetical protein YP_640393.1 KEGG: fra:Francci3_4509 hypothetical protein YP_640394.1 TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like nitrite and sulphite reductase 4Fe-4S region BFD-like [2Fe-2S]-binding region; KEGG: bld:BLi00484 assimilatory nitrite reductase (subunit); RBL01693 YP_640395.1 PFAM: Rieske [2Fe-2S] region; KEGG: bha:BH0614 assimilatory nitrite reductase (subunit) YP_640396.1 KEGG: mbo:Mb3607 possible conserved lipoprotein LppH YP_640397.1 PFAM: UspA; KEGG: hma:rrnAC0561 universal stress protein YP_640398.1 PFAM: protein of unknown function DUF112, transmembrane; KEGG: sco:SCO1140 putative integral membrane protein YP_640399.1 KEGG: sco:SCO1139 integral membrane protein YP_640400.1 PFAM: Uncharacterized protein UPF0065; KEGG: sco:SCO1138 putative tricarboxylic transport membrane protein YP_640401.1 PFAM: ATP-binding region, ATPase-like PAS fold; KEGG: sco:SCO1137 two component system histidine kinase YP_640402.1 PFAM: response regulator receiver; KEGG: sco:SCO1136 putative two component system response regulator YP_640404.1 PFAM: cytochrome P450; KEGG: mpa:MAP4068c hypothetical protein YP_640405.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: tbd:Tbd_1474 phospholipase D/transphosphatidylase YP_640406.1 PFAM: beta-lactamase; KEGG: mbo:Mb0405c possible conserved lipoprotein LpqK YP_640407.1 PFAM: glutamine amidotransferase class-I; KEGG: tel:tll1969 probable amino transferase YP_640408.1 TIGRFAM: conserved hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase Male sterility-like Domain of unknown function DUF1731; KEGG: nfa:nfa30630 hypothetical protein YP_640409.1 PFAM: phosphoribosyltransferase; KEGG: mbo:Mb2167 hypothetical protein YP_640410.1 KEGG: mbo:Mb2168c probable transmembrane protein YP_640411.1 PFAM: DivIVA; KEGG: mpa:MAP1889c Wag31 YP_640412.1 KEGG: mtc:MT2205 hypothetical protein YP_640413.1 PFAM: protein of unknown function DUF552; KEGG: mbo:Mb2171c hypothetical protein YP_640414.1 TIGRFAM: Protein of unknown function UPF0001; PFAM: alanine racemase-like; KEGG: mpa:MAP1892c hypothetical protein YP_640415.1 PFAM: protein of unknown function DUF152; KEGG: mbo:Mb2173c conserved hypothetical protein YfiH YP_640416.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function YP_640417.1 PFAM: cell division protein FtsQ Polypeptide-transport-associated, FtsQ-type; KEGG: mbo:Mb2175c possible cell division protein FtsQ YP_640418.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_640419.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis YP_640420.1 TIGRFAM: Cell division protein FtsW; PFAM: cell cycle protein; KEGG: mbo:Mb2178c ftsW-like protein FtsW YP_640421.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation YP_640422.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_640423.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase-like cytoplasmic peptidoglycan synthetases-like Mur ligase, middle region; KEGG: mbo:Mb2181c UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diamino pimelate-D-alanyl-D-alanyl ligase MurF YP_640424.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate YP_640425.1 PFAM: penicillin-binding protein, transpeptidase Penicillin-binding protein, dimerisation domain; KEGG: mpa:MAP1903c penicillin-binding protein 2 YP_640426.1 KEGG: mtc:MT2222 hypothetical protein YP_640427.1 PFAM: methyltransferase; KEGG: mpa:MAP1905c S-adenosyl-methyltransferase YP_640428.1 MraZ; UPF0040; crystal structure shows similarity to AbrB YP_640429.1 KEGG: mbo:Mb2191c probable conserved transmembrane protein YP_640430.1 KEGG: mpa:MAP1908 hypothetical protein YP_640431.1 KEGG: mpa:MAP1909 LppM YP_640432.1 PFAM: Polyprenyl synthetase; KEGG: mpa:MAP1911 geranylgeranyl pyrophosphate synthase YP_640433.1 KEGG: mpa:MAP1912 hypothetical protein YP_640434.1 KEGG: mpa:MAP1913c hypothetical protein YP_640435.1 PFAM: protein of unknown function RIO1 protein kinase; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: mbo:Mb2198 probable transmembrane serine/threonine-protein kinase L PknL (protein kinase L) (STPK L) YP_640436.1 KEGG: mtu:Rv2178c phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase, class II YP_640437.1 KEGG: mbo:Mb2201c hypothetical protein YP_640438.1 KEGG: mtc:MT2235 hypothetical protein YP_640439.1 KEGG: mle:ML0893 probable conserved integral membrane protein YP_640440.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mpa:MAP1920c putative 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_640441.1 KEGG: mpa:MAP1921c hypothetical protein YP_640442.1 PFAM: Anion-transporting ATPase; KEGG: mle:ML0890 possible membrane transport ATPase YP_640443.1 PFAM: cyclase/dehydrase; KEGG: mpa:MAP1923c hypothetical protein YP_640444.1 KEGG: mpa:MAP1924c hypothetical protein YP_640445.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mtc:MT2242 long-chain-fatty-acid--CoA ligase, putative YP_640446.1 TIGRFAM: agmatinase, putative; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: tfu:Tfu_0058 putative agmatinase YP_640447.1 PFAM: purine catabolism PurC-like; KEGG: sma:SAV792 putative transcriptional regulator YP_640448.1 PFAM: glycosyl transferase, group 1; KEGG: mpa:MAP1926c hypothetical protein YP_640449.1 KEGG: mbo:Mb2212c hypothetical protein YP_640450.1 PFAM: NLP/P60; KEGG: mbo:Mb2213c hypothetical protein YP_640451.1 KEGG: mpa:MAP1929c hypothetical protein YP_640452.1 contains 3'-5'exonuclease domain YP_640453.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_640454.1 PFAM: cytochrome c oxidase, subunit III; KEGG: mpa:MAP1932 cytochrome c oxidase subunit III YP_640455.1 PFAM: cytochrome c, class I; KEGG: mbo:Mb2217 probable ubiquinol-cytochrome c reductase QcrC (cytochrome C subunit) YP_640456.1 PFAM: Rieske [2Fe-2S] region; KEGG: mbo:Mb2218 probable rieske iron-sulfur protein QcrA YP_640457.1 PFAM: cytochrome b/b6-like; KEGG: mbo:Mb2219 probable ubiquinol-cytochrome C reductase QcrB (cytochrome B subunit) YP_640458.1 KEGG: mpa:MAP1937c hypothetical protein YP_640459.1 KEGG: mbo:Mb2221c probable conserved membrane protein MmpS3 YP_640460.1 KEGG: mbo:Mb2222c possible conserved integral membrane protein YP_640461.1 PFAM: cytochrome c oxidase, subunit II; KEGG: mbo:Mb2223c probable transmembrane cytochrome C oxidase (subunit II) CtaC YP_640462.1 KEGG: mpa:MAP1941 asparagine synthetase; TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; PFAM: glutamine amidotransferase, class-II asparagine synthase YP_640463.1 PFAM: PfkB; KEGG: mbo:Mb2225c probable carbohydrate kinase CbhK YP_640464.1 KEGG: mbo:Mb2226 possible conserved membrane protein YP_640465.1 PFAM: HesB/YadR/YfhF; KEGG: mpa:MAP1944c hypothetical protein YP_640466.1 KEGG: mpa:MAP1946 hypothetical protein YP_640467.1 PFAM: cobalbumin biosynthesis enzyme; KEGG: mpa:MAP1947 putative cobinamide kinase/cobinamide phosphate guanylyltransferase YP_640468.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole YP_640469.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole YP_640471.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_640472.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein YP_640473.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides YP_640474.1 PFAM: alpha/beta hydrolase fold short-chain dehydrogenase/reductase SDR; KEGG: mbo:Mb2237c short chain dehydrogenase YP_640475.1 KEGG: nfa:nfa16910 hypothetical protein YP_640476.2 PFAM: biotin/lipoyl attachment catalytic domain of components of various dehydrogenase complexes E3 binding; KEGG: mpa:MAP1956 dihydrolipoamide succinyltransferase YP_640477.1 TIGRFAM: conserved hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase Domain of unknown function DUF1731; KEGG: mpa:MAP1957 hypothetical protein YP_640478.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein YP_640479.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_640480.1 KEGG: mtc:MT2276 hypothetical protein YP_640481.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: amidohydrolase Amidohydrolase 3; KEGG: bur:Bcep18194_B2780 amidohydrolase YP_640482.1 PFAM: RDD; KEGG: mbo:Mb2243c probable membrane protein YP_640483.1 KEGG: mpa:MAP1962 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region glutamine synthetase, beta-Grasp YP_640484.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine YP_640485.1 PFAM: DoxX; KEGG: mbo:Mb3091c probable conserved integral membrane protein YP_640486.1 PFAM: Stage II sporulation E; SMART: Protein phosphatase 2C-like; KEGG: sco:SCO7748 hypothetical protein YP_640487.1 PFAM: cobalamin B12-binding; KEGG: sco:SCO7749 hypothetical protein YP_640488.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sma:SAV1102 putative anti-sigma factor antagonist YP_640489.1 PFAM: luciferase-like; KEGG: mpa:MAP1963c hypothetical protein YP_640490.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme YP_640491.1 KEGG: mpa:MAP1966c glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region glutamine synthetase, beta-Grasp YP_640492.1 PFAM: alpha/beta hydrolase fold TAP-like protein; KEGG: mbo:Mb2247c probable exported protease YP_640493.1 PFAM: alpha/beta hydrolase fold TAP-like protein; KEGG: mbo:Mb2248c probable exported protease YP_640494.1 PFAM: protein of unknown function UPF0089; KEGG: mpa:MAP1969c hypothetical protein YP_640495.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_640496.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: aci:ACIAD1568 putative enoyl-CoA hydratase/isomerase YP_640497.1 PFAM: CHAD adenylate cyclase; KEGG: mtc:MT2285 conserved hypothetical protein YP_640498.1 PFAM: helix-turn-helix, AraC type; KEGG: nfa:nfa43930 putative transcriptional regulator YP_640499.1 KEGG: sco:SCO4436 lyase YP_640500.1 KEGG: sco:SCO3702 DNA-binding protein YP_640501.1 PFAM: Abortive infection protein; KEGG: tfu:Tfu_1444 hypothetical protein YP_640502.1 PFAM: thiopurine S-methyltransferase Methyltransferase type 11 Methyltransferase type 12; KEGG: mpa:MAP1977c hypothetical protein YP_640503.1 PFAM: HI0933-like protein FAD dependent oxidoreductase FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sco:SCO1201 reductase YP_640504.1 PFAM: helix-turn-helix motif Cupin 2, conserved barrel; KEGG: mpa:MAP1978 hypothetical protein YP_640505.1 PFAM: ribonuclease H Phosphoglycerate mutase; KEGG: mbo:Mb2253c hypothetical protein YP_640506.1 PFAM: protein of unknown function DUF164; KEGG: mtu:Rv2229c hypothetical protein YP_640507.1 PFAM: protein of unknown function DUF34; KEGG: mpa:MAP1982c hypothetical protein YP_640508.1 PFAM: aminotransferase, class I and II; KEGG: mpa:MAP1983c histidinol-phosphate aminotransferase YP_640509.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: mbo:Mb2257 hypothetical protein YP_640510.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mbo:Mb2258 phosphotyrosine protein phosphatase PtpA (protein-tyrosine-phosphatase) (PTPase) (LMW phosphatase) YP_640511.1 KEGG: mbo:Mb2259 probable conserved transmembrane protein YP_640512.1 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group YP_640513.1 PFAM: regulatory protein, LuxR; KEGG: nfa:nfa28740 putative two-component system response regulator YP_640514.1 KEGG: nfa:nfa13590 hypothetical protein YP_640515.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase, class-II sugar isomerase (SIS); KEGG: tth:TTC1533 glucosamine-fructose-6-phosphate aminotransferase [isomerizing] YP_640516.1 PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase polysaccharide biosynthesis protein CapD dTDP-4-dehydrorhamnose reductase Male sterility-like; KEGG: mbo:Mb3658c UDP-glucose 4-epimerase GalE1 (galactowaldenase) (UDP-galactose 4-epimerase) (uridine diphosphate galactose 4-epimerase) (uridine diphospho-galactose 4-epimerase) YP_640517.1 PFAM: glycosyl transferase, family 2 polysaccharide deacetylase chitin synthase; KEGG: bcz:BCZK3135 group-specific protein YP_640518.1 PFAM: glycoside hydrolase, family 19; KEGG: sco:SCO0482 secreted chitinase YP_640519.1 KEGG: mlo:mlr5282 hypothetical protein YP_640520.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: tfu:Tfu_0908 hypothetical protein YP_640521.1 PFAM: protein of unknown function DUF1486; KEGG: pgi:PG1451 hypothetical protein YP_640522.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Redoxin; KEGG: mbo:Mb2262c peroxiredoxin AhpE YP_640523.1 KEGG: mpa:MAP1992c hypothetical protein YP_640524.1 KEGG: mbo:Mb2264c hypothetical protein YP_640525.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC YP_640526.1 KEGG: mbo:Mb2266 hypothetical protein YP_640527.1 KEGG: mpa:MAP1996 malonyl CoA-acyl carrier protein transacylase YP_640528.1 carries the fatty acid chain in fatty acid biosynthesis YP_640529.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP YP_640530.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP YP_640531.1 PFAM: carboxyl transferase; KEGG: mpa:MAP2000 propionyl-CoA carboxylase beta chain YP_640532.1 KEGG: mpa:MAP3243 hypothetical protein YP_640533.1 PFAM: UspA; KEGG: mbo:Mb2346c hypothetical protein YP_640534.1 PFAM: amino acid permease-associated region; KEGG: mbo:Mb0535 probable GABA permease GabP (4-amino butyrate transport carrier) (gama-aminobutyrate permease) YP_640535.1 PFAM: FAD dependent oxidoreductase; KEGG: mbo:Mb2273c probable glycerol-3-phosphate dehydrogenase GlpD1 YP_640536.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP2003c hypothetical protein YP_640537.1 PFAM: FAD linked oxidase-like; KEGG: mbo:Mb2275 possible flavoprotein YP_640538.1 involved in the biosynthesis of phosphatidylinositol mannosides (PIMs); the enzyme from Mycobacterium tuberculosis can phosphorylate a variety of amphipathic lipids YP_640539.1 KEGG: mle:ML1781 hypothetical protein YP_640540.1 PFAM: beta-lactamase; KEGG: mbo:Mb2281c hypothetical protein YP_640541.1 PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: mbo:Mb2282c possible transcriptional regulatory protein YP_640542.1 PFAM: regulatory protein, LuxR Tetratricopeptide TPR_4; KEGG: sco:SCO5506 regulatory protein YP_640543.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mpa:MAP2008 NAD/factor-dependent formaldehyde dehydrogenase YP_640544.1 PFAM: beta-lactamase-like; KEGG: mbo:Mb2284 hypothetical protein YP_640545.1 KEGG: mpa:MAP2010 hypothetical protein YP_640546.1 PFAM: helix-turn-helix, AraC type ThiJ/PfpI; KEGG: sma:SAV5190 putative AraC-family transcriptional regulator YP_640547.1 PFAM: ThiJ/PfpI; KEGG: bcl:ABC0530 hypothetical protein YP_640548.1 KEGG: bcl:ABC0530 hypothetical protein YP_640549.1 KEGG: mbo:Mb2287c conserved hypothetical proline rich protein YP_640550.1 KEGG: mpa:MAP2013c hypothetical protein YP_640551.1 PFAM: dihydrodipicolinate reductase; KEGG: mpa:MAP2013c hypothetical protein YP_640552.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pfo:Pfl_1753 short-chain dehydrogenase/reductase SDR YP_640553.1 KEGG: mpa:MAP0572c hypothetical protein YP_640554.1 PFAM: extracellular solute-binding protein, family 5; KEGG: sil:SPO2554 peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein YP_640555.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ttj:TTHA1337 peptide ABC transporter, permease protein YP_640556.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH2313 oligopeptide ABC transporter permease protein YP_640557.1 PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; KEGG: rsp:RSP_3252 ABC peptide transporter, fused ATPase domains YP_640558.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0079 hypothetical protein YP_640559.1 KEGG: mpa:MAP0847 hypothetical protein YP_640561.1 PFAM: CsbD-like; KEGG: jan:Jann_1769 mucin-associated surface protein YP_640562.1 KEGG: tcr:510593.49 kinetoplast DNA-associated protein PROSITE: ALA_RICH ARG_RICH GLU_RICH YP_640563.1 PFAM: protein kinase; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: mpa:MAP2031c hypothetical protein YP_640564.1 TIGRFAM: Transport protein; PFAM: MMPL; KEGG: mbo:Mb0695c probable conserved transmembrane transport protein MmpL5 YP_640565.1 PFAM: RNA binding S1; SMART: Resolvase, RNase H-like fold; KEGG: nfa:nfa41490 putative RNA-binding protein YP_640566.1 KEGG: mbo:Mb1762c probable conserved transmembrane protein YP_640568.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: reu:Reut_C6082 zinc-containing alcohol dehydrogenase superfamily YP_640569.1 TIGRFAM: phosphoenolpyruvate synthase; PFAM: PEP-utilizing enzyme pyruvate phosphate dikinase, PEP/pyruvate-binding PEP-utilising enzyme, mobile region; KEGG: gsu:GSU0803 phosphoenolpyruvate synthase YP_640570.1 TIGRFAM: HAD-superfamily hydrolase subfamily IIB; PFAM: trehalose-phosphatase glycoside hydrolase family 65, central catalytic glycoside hydrolase family 65-like; KEGG: mtc:MT2062 glycosyl hydrolase, putative YP_640571.1 PFAM: protein of unknown function UPF0089; KEGG: mpa:MAP2300c hypothetical protein YP_640572.1 PFAM: protein of unknown function UPF0089; KEGG: mbo:Mb3154c hypothetical protein YP_640573.1 KEGG: mpa:MAP1743c hypothetical protein YP_640574.1 PFAM: UspA; KEGG: mbo:Mb2051c hypothetical protein YP_640575.1 PFAM: PfkB; KEGG: mbo:Mb2054c probable phosphofructokinase PfkB (phosphohexokinase) YP_640576.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; KEGG: nfa:nfa34560 hypothetical protein YP_640577.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: nfa:nfa34550 hypothetical protein YP_640578.1 PFAM: peptidase M52, hydrogen uptake protein; KEGG: fra:Francci3_4495 peptidase M52, hydrogen uptake protein YP_640579.1 PFAM: nickel-dependent hydrogenase, large subunit; KEGG: fra:Francci3_4496 nickel-dependent hydrogenase, large subunit YP_640580.1 PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: fra:Francci3_4497 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_640581.1 PFAM: oxidoreductase FAD/NAD(P)-binding Oxidoreductase FAD-binding region; KEGG: fra:Francci3_4498 oxidoreductase FAD/NAD(P)-binding YP_640582.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: fra:Francci3_4500 4Fe-4S ferredoxin, iron-sulfur binding YP_640583.1 PFAM: Lytic transglycosylase, catalytic protein of unknown function DUF1460; KEGG: mpa:MAP0586c hypothetical protein YP_640584.1 KEGG: gga:415921 Vpr-binding protein YP_640585.1 PFAM: cytochrome P450; KEGG: mtc:MT1827 P450 heme-thiolate protein YP_640586.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb1805c possible transcriptional regulatory protein YP_640587.1 KEGG: nfa:nfa16720 hypothetical protein YP_640589.1 TIGRFAM: conserved hypothetical protein; KEGG: cgb:cg1233 hypothetical protein YP_640590.1 KEGG: mbo:Mb2340c hypothetical protein YP_640591.1 KEGG: mbo:Mb2341c hypothetical protein YP_640592.1 PFAM: peptidase U62, modulator of DNA gyrase; KEGG: mpa:MAP2089c hypothetical protein YP_640593.1 PFAM: cobalt transport protein; KEGG: mbo:Mb2352c conserved hypothetical protein YP_640594.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: mbo:Mb2353c putative transmembrane ATP-binding protein ABC transorter YP_640595.1 PFAM: regulatory protein, MarR; KEGG: mbo:Mb2354 hypothetical protein YP_640596.1 PFAM: major facilitator superfamily MFS_1; KEGG: nfa:nfa4770 putative transporter YP_640597.1 PFAM: protein of unknown function DUF125, transmembrane; KEGG: sma:SAV6188 putative membrane protein YP_640598.1 PFAM: acyl-CoA oxidase-like acyl-CoA dehydrogenase-like; KEGG: mpa:MAP2101 hypothetical protein YP_640599.1 KEGG: mpa:MAP2103c LppP YP_640601.1 PFAM: cytochrome c oxidase, subunit I; KEGG: mbo:Mb3069c probable cytochrome C oxidase polypeptide I CtaD (cytochrome AA3 subunit 1) YP_640602.1 KEGG: ddi:DDB0220643 hypothetical protein YP_640603.1 KEGG: mpa:MAP2129 hypothetical protein YP_640605.1 synthesizes RNA primers at the replication forks YP_640606.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate YP_640607.1 PFAM: protein of unknown function DUF477; KEGG: mbo:Mb2374 possible conserved transmembrane protein YP_640608.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_640609.1 PFAM: regulatory protein, ArsR; KEGG: mpa:MAP2138 hypothetical protein YP_640610.1 PFAM: ferric-uptake regulator; KEGG: mbo:Mb2380 probable ferric uptake regulation protein FurB YP_640611.1 KEGG: mpa:MAP2140c hypothetical protein YP_640612.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate YP_640613.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA YP_640614.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_640615.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome YP_640616.1 KEGG: mbo:Mb2386c hypothetical protein YP_640617.1 PFAM: CBS protein of unknown function DUF21 transporter-associated region; KEGG: mbo:Mb2387c probable conserved transmembrane protein YP_640618.1 PFAM: protein of unknown function UPF0054; KEGG: mpa:MAP2159c hypothetical protein YP_640619.1 PFAM: PhoH-like protein KH, type 1; SMART: KH; KEGG: mbo:Mb2389c probable phoh-like protein phoh1 (phosphate starvation-inducible protein PsiH) YP_640620.1 KEGG: pai:PAE2889 hypothetical protein YP_640621.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase YP_640622.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion YP_640623.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons YP_640624.1 KEGG: mpa:MAP2164 hypothetical protein YP_640626.1 PFAM: MbtH-like protein; KEGG: nfa:nfa5500 putative MbtH family protein YP_640627.1 PFAM: FAD dependent oxidoreductase; KEGG: mbo:Mb2399c lysine-N-oxygenase MbtG (L-lysine 6-monooxygenase) (lysine N6-hydroxylase) YP_640628.1 TIGRFAM: Amino acid adenylation; PFAM: AMP-dependent synthetase and ligase condensation domain phosphopantetheine-binding; KEGG: mtc:MT2447 peptide synthetase YP_640629.1 TIGRFAM: Amino acid adenylation; PFAM: AMP-dependent synthetase and ligase condensation domain phosphopantetheine-binding; KEGG: mtc:MT2448 peptide synthetase YP_640630.1 PFAM: acyl transferase region NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR phosphopantetheine-binding; KEGG: mtc:MT2449 polyketide synthase, putative YP_640631.1 PFAM: beta-ketoacyl synthase; KEGG: mbo:Mb2403c polyketide synthetase MbtC (polyketide synthase) YP_640632.1 PFAM: Thioesterase; KEGG: mbo:Mb2404c phenyloxazoline synthase MbtB (phenyloxazoline synthetase) YP_640633.1 TIGRFAM: Amino acid adenylation; PFAM: AMP-dependent synthetase and ligase condensation domain phosphopantetheine-binding Non-ribosomal peptide synthetase; KEGG: mpa:MAP2177c MbtB YP_640634.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mbo:Mb2405 bifunctional enzyme MbtA: salicyl-AMP ligase (SAL-AMP ligase) + salicyl-S-arcp synthetase YP_640635.1 PFAM: beta-ketoacyl synthase acyl transferase region short-chain dehydrogenase/reductase SDR phosphopantetheine-binding; KEGG: mtu:Rv2931 phenolpthiocerol synthesis polyketide synthase YP_640636.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_640637.1 PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like nitrite and sulphite reductase 4Fe-4S region; KEGG: mbo:Mb2412 probable ferredoxin-dependant nitrite reductase NirA YP_640638.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite YP_640639.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: mbo:Mb2414 hypothetical protein YP_640640.1 PFAM: CBS protein of unknown function DUF21 transporter-associated region; KEGG: nfa:nfa28250 putative membrane protein YP_640641.1 PFAM: CBS protein of unknown function DUF21; KEGG: nfa:nfa28240 hypothetical protein YP_640642.1 KEGG: mbo:Mb2419c probable sulfate-transport ATP-binding protein ABC transporter CysA1; TIGRFAM: Sulphate transport system permease protein 1; PFAM: ABC transporter related TOBE; SMART: ATPase YP_640643.1 TIGRFAM: Sulphate transport system permease protein 2 Sulfate ABC transporter, permease protein CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpa:MAP2211c sulfate transport system permease protein YP_640644.1 TIGRFAM: Sulphate transport system permease protein 2 Sulfate ABC transporter, permease protein CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpa:MAP2212c sulfate transport system permease protein YP_640645.1 TIGRFAM: Thiosulphate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: mpa:MAP2213c sulfate transport system substrate-binding protein YP_640646.1 KEGG: mpa:MAP2214c hypothetical protein YP_640647.1 PFAM: glycoside hydrolase 15-related; KEGG: mpa:MAP2215 hypothetical protein YP_640648.1 PFAM: ANTAR YP_640649.1 KEGG: mbo:Mb3266c probable conserved integral membrane protein YP_640651.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: sma:SAV1206 putative acyl-CoA dehydrogenase YP_640652.1 PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: sma:SAV5974 putative LysR-family transcriptional regulator YP_640653.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: mpa:MAP3695 hypothetical protein YP_640654.1 KEGG: mtc:MT3681 hypothetical protein YP_640655.1 KEGG: mpa:MAP2216c LppR YP_640656.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_640657.1 KEGG: mpa:MAP2218 hypothetical protein YP_640660.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpa:MAP3542 hypothetical protein YP_640661.1 PFAM: luciferase-like; KEGG: sma:SAV1205 putative alkanesulfonate monooxygenase YP_640662.1 KEGG: ava:Ava_0106 luciferase-like YP_640663.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: sco:SCO1559 putative ABC transporter ATP-binding protein YP_640664.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vvy:VV0891 ABC-type metal ion transport system, permease component YP_640665.1 PFAM: transposase, IS111A/IS1328/IS1533 transposase IS116/IS110/IS902; KEGG: mpa:MAP3748c IS1110 transposase YP_640666.1 PFAM: NLPA lipoprotein; KEGG: bte:BTH_II2134 D-methionine-binding lipoprotein MetQ YP_640667.1 KEGG: nfa:nfa12020 putative monooxygenase YP_640668.1 PFAM: CBS; KEGG: mpa:MAP2219c hypothetical protein YP_640669.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions YP_640670.1 PFAM: transglutaminase-like transglutaminase-like-like; KEGG: mbo:Mb2432c hypothetical protein YP_640671.1 PFAM: protein of unknown function DUF403; KEGG: mbo:Mb2433c hypothetical protein YP_640672.1 PFAM: protein of unknown function DUF404 protein of unknown function DUF407; KEGG: mpa:MAP2223c hypothetical protein YP_640673.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_640674.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; KEGG: mtc:MT2486 putative DNA polymerase III, delta subunit YP_640675.1 PFAM: ComEC/Rec2-related protein; KEGG: mtc:MT2487 hypothetical protein YP_640677.1 PFAM: peptidase U35, phage prohead HK97; KEGG: nse:NSE_0554 phage prohead protease, HK97 family YP_640679.1 KEGG: mpa:MAP2765c hypothetical protein YP_640680.1 KEGG: mbo:Mb1610c possible phiRv1 phage protein YP_640681.1 PFAM: Resolvase-like Recombinase; KEGG: mbo:Mb1612c probable phiRv1 integrase YP_640682.1 KEGG: mbo:Mb2437c hypothetical protein YP_640683.1 KEGG: mbo:Mb2438c competence protein ComEA; TIGRFAM: Competence protein ComEA helix-hairpin-helix region; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding, class 1 YP_640684.1 PFAM: Endoribonuclease L-PSP; KEGG: bja:blr4467 hypothetical protein YP_640685.1 PFAM: dihydrodipicolinate reductase; KEGG: mpa:MAP2237 hypothetical protein YP_640686.1 KEGG: mpa:MAP0231c hypothetical protein YP_640687.1 KEGG: mbo:Mb2061 hypothetical protein YP_640688.1 PFAM: regulatory protein, ArsR Helix-turn-helix, type 11; KEGG: mtc:MT2094 transcriptional regulator, ArsR family YP_640689.1 TIGRFAM: degV family protein; PFAM: DegV; KEGG: mbo:Mb2440c hypothetical protein YP_640690.1 KEGG: mbo:Mb2441c hypothetical protein YP_640691.1 PFAM: Phosphoglycerate mutase; KEGG: mtc:MT2492 phosphoglycerate mutase family protein YP_640692.1 PFAM: Iojap-related protein; KEGG: mbo:Mb2443c hypothetical protein YP_640693.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria YP_640694.1 PFAM: regulatory protein GntR, HTH UbiC transcription regulator-associated; KEGG: bld:BLi04350 similar to transcriptional regulator (GntR family); RBL01565 YP_640695.1 PFAM: amino acid permease-associated region; KEGG: sma:SAV6947 putative amino acid permease YP_640696.1 PFAM: carbohydrate kinase, FGGY; KEGG: sco:SCO7004 probable carbohydrate kinase YP_640697.1 PFAM: FAD dependent oxidoreductase BFD-like [2Fe-2S]-binding region; KEGG: sco:SCO7005 glycerol-3-phosphate dehydrogenase YP_640698.1 PFAM: HI0933-like protein FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sco:SCO7006 oxidoreductase YP_640699.1 PFAM: VWA containing CoxE-like; KEGG: mpa:MAP2245c hypothetical protein YP_640700.1 PFAM: ATPase associated with various cellular activities, AAA_5; SMART: ATPase; KEGG: mpa:MAP2246c hypothetical protein YP_640701.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_640702.1 PFAM: PfkB; KEGG: mpa:MAP2251 ribokinase YP_640703.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP2748c hypothetical protein YP_640704.1 PFAM: protein of unknown function UPF0089; KEGG: mbo:Mb3154c hypothetical protein YP_640705.1 PFAM: protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mpa:MAP2495 hypothetical protein YP_640706.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers YP_640707.1 PFAM: isochorismatase hydrolase; KEGG: mpa:MAP2259 EntB YP_640708.1 PFAM: Silent information regulator protein Sir2; KEGG: mpa:MAP2260 hypothetical protein YP_640710.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis YP_640711.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication YP_640712.1 involved in the peptidyltransferase reaction during translation YP_640713.1 PFAM: ribosomal protein L21; KEGG: mpa:MAP2266c 50S ribosomal protein L21 YP_640714.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1; KEGG: mpa:MAP2267c possible ribonuclease YP_640715.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate YP_640716.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa11890 putative transcriptional regulator YP_640717.1 KEGG: nfa:nfa11900 hypothetical protein YP_640718.1 KEGG: nfa:nfa11910 hypothetical protein YP_640719.1 KEGG: mpa:MAP2269c hypothetical protein YP_640720.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases-like Mur ligase, middle region; KEGG: mpa:MAP2270c dihydrofolate synthase / folylpolyglutamate synthase YP_640721.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain YP_640722.1 PFAM: Saccharopine dehydrogenase; KEGG: mpa:MAP2272c hypothetical protein YP_640723.1 PFAM: peptidase S9, prolyl oligopeptidase active site region; KEGG: ade:Adeh_0114 peptidase S9, prolyl oligopeptidase YP_640724.1 PFAM: monooxygenase, FAD-binding; KEGG: nfa:nfa19310 putative monooxygenase YP_640725.1 KEGG: sma:SAV3169 hypothetical protein YP_640726.1 PFAM: Transglycosylase-like; KEGG: nfa:nfa19340 hypothetical protein YP_640727.1 PFAM: Transglycosylase-like; KEGG: nfa:nfa19340 hypothetical protein YP_640728.1 MobA; links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide; involved in molybdenum cofactor biosynthesis YP_640729.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin YP_640730.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase-like; KEGG: mpa:MAP2277c ferredoxin oxidoreductase, alpha subunit YP_640731.1 PFAM: dihydrodipicolinate reductase; KEGG: mpa:MAP2881c hypothetical protein YP_640732.1 PFAM: Rieske [2Fe-2S] region; KEGG: mpa:MAP2882c hypothetical protein YP_640733.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa11800 putative transcriptional regulator YP_640734.1 KEGG: nfa:nfa29180 putative lipoprotein YP_640735.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth YP_640736.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase protein of unknown function DUF1205; KEGG: bja:bll2692 putative glycosyltransferase YP_640737.1 PFAM: Rieske [2Fe-2S] region; KEGG: sco:SCO1763 iron-sulphur protein (secreted protein) YP_640738.1 PFAM: fatty acid desaturase; KEGG: nfa:nfa46030 putative fatty acid desaturase YP_640739.1 binds and unfolds substrates as part of the ClpXP protease YP_640740.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates YP_640741.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates YP_640742.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer YP_640743.1 KEGG: bcl:ABC2055 penicillin-binding protein 1A/1B YP_640744.1 KEGG: bur:Bcep18194_B0792 hypothetical protein YP_640745.1 PFAM: amine oxidase; KEGG: fra:Francci3_2649 amine oxidase YP_640746.1 PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: mle:ML2467 possible undecaprenyl pyrophosphate synthetase YP_640747.1 PFAM: sugar transferase; KEGG: gvi:gll3791 probable glycosyl transferase YP_640748.1 PFAM: GAF; KEGG: rba:RB12326 sensory histidine protein kinase YP_640749.1 PFAM: glycosyl transferase, group 1; KEGG: fra:Francci3_0720 glycosyl transferase, group 1 YP_640753.1 PFAM: glycosyl transferase, group 1; KEGG: rpa:RPA3352 glycosyltransferase YP_640755.1 KEGG: cef:CE0127 hypothetical protein YP_640757.1 PFAM: molybdopterin oxidoreductase molydopterin dinucleotide-binding region molybdopterin oxidoreductase Fe4S4 region; KEGG: rpb:RPB_3416 molybdopterin oxidoreductase YP_640758.1 PFAM: beta-lactamase; KEGG: mpa:MAP2283 LipP YP_640759.1 KEGG: cef:CE2317 hypothetical protein YP_640760.1 PFAM: sodium/hydrogen exchanger; KEGG: sco:SCO5246 putative Na+/H+ antiporter YP_640761.1 PFAM: Formamidopyrimidine-DNA glycolase; KEGG: mpa:MAP2284c formamidopyrimidine-DNA glycosylase YP_640762.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity YP_640763.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: sma:SAV4805 putative oxidoreductase YP_640764.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: sma:SAV4806 putative cytidine/deoxycytidine deaminase YP_640765.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sco:SCO2561 long-chain fatty-acid CoA ligase YP_640766.1 PFAM: DSBA oxidoreductase; KEGG: mbo:Mb2493c hypothetical protein YP_640767.1 PFAM: protein of unknown function DUF732; KEGG: mtc:MT3462 hypothetical protein YP_640768.1 TIGRFAM: Peptidase M1, aminopeptidase N actinomycete-type; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: mpa:MAP2287 putative aminopeptidase YP_640769.1 SMART: HNH nuclease; KEGG: pmn:PMN2A_1358 HNH nuclease YP_640770.1 KEGG: mpa:MAP2288c hypothetical protein YP_640771.1 KEGG: mtc:MT2544 hypothetical protein YP_640772.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mpa:MAP2290c hypothetical protein YP_640773.1 PFAM: globin; KEGG: mtc:MT2546 protozoan/cyanobacterial globin family protein YP_640774.1 PFAM: alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain; KEGG: mtu:Rv2471 alpha-glucosidase YP_640775.1 KEGG: mtc:MT2549 hypothetical protein YP_640776.1 KEGG: mbo:Mb2502c hypothetical protein YP_640777.1 PFAM: NAD-glutamate dehydrogenase; KEGG: mbo:Mb2503c probable NAD-dependent glutamate dehydrogenase GDH (NAD-GDH) (NAD-dependent glutamic dehydrogenase) YP_640778.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence YP_640779.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mtc:MT2553 single-strand DNA binding protein YP_640780.1 PFAM: copper resistance D; KEGG: mpa:MAP2297c putative copper resistance protein D / membrane protein YP_640781.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA YP_640782.1 KEGG: mbo:Mb2508c possible transmembrane phospholipid biosynthesis bifunctionnal enzyme PlsC: putative L-3-phosphoserine phosphatase (O-phosphoserine phosphohydrolase) (PSP) (PSPase) + 1-acyl-SN-glycerol-3-phosphate acyltransferase (1-AGP acyltransferase) (1-AGPAT) (LYSOPH; TIGRFAM: HAD-superfamily hydrolase subfamily IB, PSPase-like HAD-superfamily subfamily IB, PSPase-like; PFAM: phospholipid/glycerol acyltransferase YP_640783.1 PFAM: protein of unknown function UPF0089; KEGG: mpa:MAP2300c hypothetical protein YP_640784.1 PFAM: UspA; KEGG: mpa:MAP1741c hypothetical protein YP_640785.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: tfu:Tfu_2951 hypothetical protein YP_640786.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_640787.1 PFAM: biotin/lipoyl attachment catalytic domain of components of various dehydrogenase complexes E3 binding; KEGG: mtc:MT2570 2-oxoisovalerate dehydrogenase E2 component, dihydrolipoamide acetyltransferase, putative YP_640788.1 PFAM: Transketolase, central region Transketolase-like; KEGG: mpa:MAP2308c pyruvate dehydrogenase E1 component, beta subunit YP_640789.1 PFAM: dehydrogenase, E1 component; KEGG: mbo:Mb2525c probable pyruvate dehydrogenase E1 component (alpha subunit) PdhA (pyruvate decarboxylase) (pyruvate dehydrogenase) (pyruvic dehydrogenase) YP_640790.1 PFAM: HpcH/HpaI aldolase; KEGG: nfa:nfa50410 putative citrate lyase beta subunit YP_640791.1 PFAM: MaoC-like dehydratase; KEGG: nfa:nfa50400 hypothetical protein YP_640792.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: nfa:nfa50390 putative acyl-CoA dehydrogenase YP_640793.1 PFAM: biotin/lipoyl attachment Carbamoyl-phosphate synthase L chain, ATP-binding Carbamoyl-phosphate synthetase large chain-like biotin carboxylase-like; KEGG: nfa:nfa50380 putative acetyl-CoA carboxylase alpha subunit YP_640794.1 PFAM: carboxyl transferase; KEGG: nfa:nfa50370 putative acetyl-CoA carboxylase beta subunit YP_640795.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb2534 probable transcriptional regulatory protein (probably TetR-family) YP_640796.1 KEGG: sco:SCO0231 small hydrophobic hypothetical protein YP_640797.1 KEGG: mpa:MAP0257 hypothetical protein YP_640798.1 PFAM: peptidase S15 peptidase S9, prolyl oligopeptidase active site region dienelactone hydrolase; KEGG: cjk:jk1706 putative acylamino-acid-releasing enzyme YP_640799.1 KEGG: mbo:Mb2535 possible conserved proline rich membrane protein YP_640800.1 PFAM: major facilitator superfamily MFS_1; KEGG: mbo:Mb2536c probable conserved integral membrane leucine and alanine rich protein YP_640801.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP2318 hypothetical protein YP_640802.1 PFAM: protein of unknown function DUF853, NPT hydrolase putative; KEGG: mbo:Mb2538c hypothetical protein YP_640803.1 3'-5' exoribonuclease specific for small oligoribonuclotides YP_640804.1 PFAM: ErfK/YbiS/YcfS/YnhG; KEGG: mpa:MAP2322c LppS_2 YP_640805.1 KEGG: mbo:Mb0593c PE-PGRS family protein YP_640806.1 KEGG: mpa:MAP2328c hypothetical protein YP_640807.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Redoxin; KEGG: mtc:MT2597 bacterioferritin comigratory protein YP_640808.1 PFAM: peptidase M20 peptidase dimerisation; KEGG: mbo:Mb2551c hypothetical protein YP_640809.1 KEGG: psb:Psyr_3126 transporter, putative YP_640810.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids YP_640811.1 PFAM: beta-ketoacyl synthase acyl transferase region MaoC-like dehydratase Domain of unknown function DUF1729; KEGG: mpa:MAP2332c Fas YP_640812.1 KEGG: mbo:Mb2554c hypothetical protein YP_640813.1 PFAM: regulatory protein, MerR; KEGG: nfa:nfa28610 putative transcriptional regulator YP_640814.1 PFAM: major facilitator superfamily MFS_1; KEGG: lxx:Lxx10180 major facilitator superfamily permease YP_640815.1 PFAM: ChaB; KEGG: mpa:MAP2952c hypothetical protein YP_640816.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: mpa:MAP0750c hypothetical protein YP_640817.1 KEGG: mpa:MAP0751c hypothetical protein YP_640818.1 activates fatty acids by binding to coenzyme A YP_640819.1 PFAM: amidohydrolase 2; KEGG: mpa:MAP0779 hypothetical protein YP_640820.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP2188c hypothetical protein YP_640821.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP0777c hypothetical protein YP_640822.1 PFAM: protein of unknown function DUF35; KEGG: mpa:MAP0797 hypothetical protein YP_640823.1 PFAM: Thiolase; KEGG: mpa:MAP0798 hypothetical protein YP_640824.1 KEGG: mpa:MAP0776c hypothetical protein YP_640825.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0775 hypothetical protein YP_640826.1 PFAM: cytochrome P450; KEGG: mpa:MAP0774c hypothetical protein YP_640827.1 KEGG: mpa:MAP0769 hypothetical protein YP_640828.1 KEGG: mpa:MAP0766c hypothetical protein YP_640829.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mpa:MAP0765 hypothetical protein YP_640830.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mpa:MAP0764 hypothetical protein YP_640831.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mpa:MAP2192 hypothetical protein YP_640832.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mpa:MAP0761 hypothetical protein YP_640833.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mpa:MAP0760 hypothetical protein YP_640834.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mpa:MAP2189 hypothetical protein YP_640835.1 PFAM: protein of unknown function DUF140; KEGG: mpa:MAP0758 putative ABC transport system permease protein YP_640836.1 PFAM: protein of unknown function DUF140; KEGG: mpa:MAP0757 putative ABC transport system permease protein YP_640837.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mpa:MAP0756 hypothetical protein YP_640838.1 PFAM: aldehyde dehydrogenase; KEGG: mpa:MAP0755 AldA_2 YP_640839.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0754c hypothetical protein YP_640840.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1489c hypothetical protein YP_640841.1 KEGG: mpa:MAP0753c hypothetical protein YP_640842.1 PFAM: cytochrome P450; KEGG: mpa:MAP0752c hypothetical protein YP_640843.1 KEGG: mpa:MAP2179 hypothetical protein YP_640844.1 KEGG: mbo:Mb1207c hypothetical protein YP_640845.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP0748 hypothetical protein YP_640846.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP0747 hypothetical protein YP_640847.1 PFAM: amidohydrolase 2; KEGG: mpa:MAP0743c hypothetical protein YP_640848.1 PFAM: amidohydrolase 2; KEGG: mpa:MAP0742c hypothetical protein YP_640849.1 PFAM: Rieske [2Fe-2S] region; KEGG: mpa:MAP0741c hypothetical protein YP_640850.1 KEGG: mpa:MAP0740c hypothetical protein YP_640851.1 KEGG: mpa:MAP0739 hypothetical protein YP_640852.1 PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: mpa:MAP0738c hypothetical protein YP_640854.1 PFAM: protein of unknown function DUF35; KEGG: mpa:MAP0733c hypothetical protein YP_640855.1 KEGG: mpa:MAP0732c hypothetical protein YP_640856.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mpa:MAP0731c hypothetical protein YP_640857.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mpa:MAP0731c hypothetical protein YP_640858.1 PFAM: cytochrome P450; KEGG: mpa:MAP0730c hypothetical protein YP_640859.1 KEGG: mpa:MAP0729c hypothetical protein YP_640860.1 PFAM: cytochrome P450; KEGG: mpa:MAP0730c hypothetical protein YP_640861.1 KEGG: sil:SPOA0433 esterase EstC, putative YP_640864.1 PFAM: Rieske [2Fe-2S] region; KEGG: mpa:MAP4315 hypothetical protein YP_640865.1 PFAM: regulatory protein, TetR; KEGG: fra:Francci3_1116 transcriptional regulator, TetR family YP_640866.1 PFAM: protein of unknown function DUF1330; KEGG: mpa:MAP0728 hypothetical protein YP_640867.1 KEGG: tte:TTE1774 Ferredoxin 1 YP_640868.1 PFAM: cytochrome P450; KEGG: mpa:MAP0727 hypothetical protein YP_640869.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mpa:MAP3134c hypothetical protein YP_640870.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: mpa:MAP3135c hypothetical protein YP_640871.1 KEGG: mpa:MAP0719c hypothetical protein YP_640872.1 PFAM: Rieske [2Fe-2S] region; KEGG: mpa:MAP3136c hypothetical protein YP_640873.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3137c hypothetical protein YP_640874.1 PFAM: ferredoxin oxidoreductase FAD/NAD(P)-binding Oxidoreductase FAD-binding region; KEGG: mpa:MAP3138c hypothetical protein YP_640875.1 PFAM: dihydrodipicolinate reductase; KEGG: mpa:MAP2196 hypothetical protein YP_640876.1 PFAM: regulatory protein, MarR; KEGG: mpa:MAP3139c hypothetical protein YP_640877.1 PFAM: amidohydrolase Amidohydrolase 3; KEGG: mpa:MAP3140c hypothetical protein YP_640878.1 KEGG: mpa:MAP0719c hypothetical protein YP_640879.1 PFAM: Rieske [2Fe-2S] region; KEGG: mpa:MAP3141c hypothetical protein YP_640880.1 PFAM: aldehyde dehydrogenase; KEGG: mpa:MAP2338 hypothetical protein YP_640882.1 PFAM: Integrase, catalytic region; KEGG: lxx:Lxx22450 transposase, undefined YP_640883.1 PFAM: cytochrome P450; KEGG: mpa:MAP2051c hypothetical protein YP_640884.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa11460 putative transcriptional regulator YP_640885.1 KEGG: sma:SAV940 AveC YP_640886.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa22020 putative transcriptional regulator YP_640887.1 KEGG: sma:SAV940 AveC YP_640888.1 PFAM: ATPase associated with various cellular activities, AAA_5 CbbQ/NirQ/NorQ-like; KEGG: mpa:MAP2653c NirQ YP_640889.1 PFAM: von Willebrand factor, type A; KEGG: mpa:MAP2654c hypothetical protein YP_640890.1 PFAM: alpha/beta hydrolase fold; KEGG: atc:AGR_pAT_264 hypothetical protein YP_640891.1 PFAM: NAD-dependent epimerase/dehydratase Male sterility-like; KEGG: mpa:MAP0735 hypothetical protein YP_640892.1 KEGG: mpa:MAP0736 hypothetical protein YP_640893.1 PFAM: luciferase-like; KEGG: mpa:MAP0737 hypothetical protein YP_640894.1 PFAM: HNH endonuclease protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mbo:Mb1794c hypothetical protein YP_640895.1 KEGG: bja:bll2250 hypothetical protein YP_640896.1 PFAM: regulatory protein, TetR; KEGG: btk:BT9727_1986 transcriptional regulator, TetR family YP_640897.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: nfa:nfa24990 putative acyl-CoA dehydrogenase YP_640898.1 PFAM: aminoglycoside phosphotransferase; KEGG: mpa:MAP0267c hypothetical protein YP_640899.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mpa:MAP0263c NADPH quinone oxidoreductase, putative YP_640900.1 KEGG: mpa:MAP0726 hypothetical protein YP_640901.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0725 hypothetical protein YP_640902.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: tfu:Tfu_1512 putative acyl-CoA dehydrogenase YP_640903.1 PFAM: Thiolase; KEGG: mpa:MAP0724 FadA6_2 YP_640904.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: fra:Francci3_2429 L-carnitine dehydratase/bile acid-inducible protein F YP_640905.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eba:ebA5300 putative dehydrogenase YP_640906.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP0723 putative acyl-CoA dehydrogenase YP_640907.1 PFAM: amidohydrolase 2; KEGG: mpa:MAP0722 hypothetical protein YP_640908.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mpa:MAP0721c hypothetical protein YP_640909.1 PFAM: Rieske [2Fe-2S] region; KEGG: mpa:MAP0720c hypothetical protein YP_640910.1 KEGG: mpa:MAP0719c hypothetical protein YP_640911.1 PFAM: amidohydrolase Amidohydrolase 3; KEGG: mpa:MAP0718c hypothetical protein YP_640912.1 KEGG: mpa:MAP0717c hypothetical protein YP_640913.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP0716c hypothetical protein YP_640914.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP0715c hypothetical protein YP_640915.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_640916.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP0713 hypothetical protein YP_640917.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0712c hypothetical protein YP_640918.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0711c hypothetical protein YP_640919.1 PFAM: protein of unknown function UPF0089; KEGG: mpa:MAP3657 hypothetical protein YP_640920.1 activates fatty acids by binding to coenzyme A YP_640921.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mpa:MAP1160c hypothetical protein YP_640922.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR 3-beta hydroxysteroid dehydrogenase/isomerase polysaccharide biosynthesis protein CapD dTDP-4-dehydrorhamnose reductase Male sterility-like; KEGG: mpa:MAP1751 hypothetical protein YP_640923.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0709 hypothetical protein YP_640924.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mpa:MAP0708 hypothetical protein YP_640925.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nfa:nfa4820 putative enoyl-CoA hydratase/isomerase family protein YP_640926.1 PFAM: peptidase M24; KEGG: mpa:MAP1466c hypothetical protein YP_640927.1 PFAM: peptidase M24; KEGG: mpa:MAP0706 hypothetical protein YP_640928.1 PFAM: amidohydrolase 2; KEGG: mpa:MAP0705 hypothetical protein YP_640929.1 PFAM: cytochrome P450; KEGG: mpa:MAP0704 hypothetical protein YP_640930.1 KEGG: sma:SAV1610 putative ferredoxin YP_640931.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0703 hypothetical protein YP_640932.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0702 hypothetical protein YP_640933.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP0700 hypothetical protein YP_640934.1 PFAM: N-6 DNA methylase; KEGG: mba:Mbar_A3269 type I restriction-modification system specificity subunit YP_640936.1 KEGG: mbo:Mb2339 hypothetical protein YP_640938.1 KEGG: aci:ACIAD3437 hypothetical protein YP_640939.1 KEGG: mma:MM1667 type I restriction-modification system specificity subunit YP_640940.1 KEGG: mac:MA2122 type I site-specific deoxyribonuclease YP_640941.1 PFAM: type III restriction enzyme, res subunit protein of unknown function DUF450 DEAD/DEAH box helicase-like; KEGG: mba:Mbar_A3274 type I site-specific deoxyribonuclease YP_640942.1 PFAM: NADPH-dependent FMN reductase; KEGG: sma:SAV3813 putative NADPH-dependent FMN reductase YP_640943.1 KEGG: mpa:MAP0699 hypothetical protein YP_640944.1 catalyzes the formation of 5-alpha-androstane-3,17-dione from androsterone; Acts on other 3-alpha-hydroxysteroids and on 9-, 11- and 15-hydroxyprostaglandin. YP_640945.1 PFAM: luciferase-like; KEGG: mpa:MAP0697 hypothetical protein YP_640946.1 initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione YP_640947.1 catalyzes the cleavage of 3-(2,3-dihydroxyphenyl) propionate into 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate; part of the 3-phenylpropionic acid degradation pathway; member of the protocatechuate 4,5-dioxygenase family YP_640948.1 catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate YP_640949.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP0693 2-hydroxy-6-phenylhexa-2,4-dienoic acid hydrolase YP_640950.1 PFAM: regulatory proteins, IclR; KEGG: mpa:MAP0692c hypothetical protein YP_640951.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein-like FAD dependent oxidoreductase; KEGG: mpa:MAP0691c hypothetical protein YP_640953.1 PFAM: cytochrome c oxidase, subunit III; KEGG: mpa:MAP0773 hypothetical protein YP_640954.1 KEGG: mpa:MAP0772 hypothetical protein YP_640955.1 KEGG: mpa:MAP0771 hypothetical protein YP_640956.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0770c hypothetical protein YP_640957.1 KEGG: mpa:MAP0687 hypothetical protein; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: ATPase YP_640958.1 PFAM: Thiolase 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; KEGG: mpa:MAP0686 hypothetical protein YP_640959.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: tfu:Tfu_0275 putative short chain dehydrogenase YP_640960.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ade:Adeh_3760 short-chain dehydrogenase/reductase SDR YP_640961.1 KEGG: mbo:Mb3496 hypothetical protein YP_640964.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: hch:HCH_10016 restriction endonuclease YP_640967.1 PFAM: phage major capsid protein, HK97; KEGG: bca:BCE0400 phage major capsid protein, HK97 family YP_640974.1 PFAM: Excinuclease ABC, C subunit-like YP_640978.1 PFAM: Resolvase-like Recombinase; KEGG: mtc:MT3573 integrase, putative YP_640979.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP0683 hypothetical protein YP_640980.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP0682 hypothetical protein YP_640981.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP0681 hypothetical protein YP_640982.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP0680 hypothetical protein YP_640983.1 PFAM: ferredoxin; KEGG: mpa:MAP0679c FdxB YP_640984.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mpa:MAP0676 hypothetical protein YP_640985.1 PFAM: luciferase-like; KEGG: mpa:MAP0675 hypothetical protein YP_640986.1 TIGRFAM: methylmalonyl-CoA mutase C-terminal domain; PFAM: cobalamin B12-binding; KEGG: mpa:MAP0674 McmA2 YP_640987.1 KEGG: mpa:MAP0673 hypothetical protein; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; PFAM: methylmalonyl-CoA mutase YP_640988.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0672c short chain dehydrogenase YP_640989.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP3659 hypothetical protein YP_640990.1 KEGG: mpa:MAP3660 hypothetical protein YP_640991.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase histidine kinase, HAMP region; KEGG: mpa:MAP2695c hypothetical protein YP_640992.1 PFAM: General substrate transporter major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_C7406 major facilitator superfamily (MFS_1) transporter YP_640993.1 PFAM: General substrate transporter major facilitator superfamily MFS_1; KEGG: bja:bll0889 putative transport protein YP_640994.1 SMART: Protein of unknown function DUF227; KEGG: mpa:MAP4313 hypothetical protein YP_640995.1 PFAM: cytochrome P450; KEGG: mpa:MAP2051c hypothetical protein YP_640996.1 PFAM: regulatory protein, LacI; KEGG: mpa:MAP4300 hypothetical protein YP_640997.1 PFAM: General substrate transporter major facilitator superfamily MFS_1; KEGG: sco:SCO2336 putative integral membrane transport protein YP_640998.1 PFAM: protein of unknown function DUF309; KEGG: nfa:nfa2700 hypothetical protein YP_640999.1 KEGG: dra:DR1925 hypothetical protein YP_641000.1 KEGG: sma:SAV6218 hypothetical protein YP_641001.1 KEGG: mtc:MT1384 lipoprotein, putative YP_641002.1 KEGG: mbo:Mb1377c hypothetical protein YP_641003.1 PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO7346 membrane transport protein YP_641004.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine YP_641005.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs YP_641006.1 PFAM: beta-lactamase-like; KEGG: mpa:MAP2423c hypothetical protein YP_641007.1 converts L-glutamate to D-glutamate, a component of peptidoglycan YP_641008.1 PFAM: Rhomboid-like protein; KEGG: mtc:MT1378 rhomboid family protein YP_641009.1 KEGG: mbo:Mb1371 probable cysteine synthase B CysM (CSase B) (O-acetylserine sulfhydrylase B) (O-acetylserine (thiol)-lyase B); TIGRFAM: cysteine synthases; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit YP_641010.1 PFAM: thiamineS; KEGG: mbo:Mb1370 9.5 kDa culture filtrate antigen CFP10A YP_641011.1 PFAM: Mov34/MPN/PAD-1; KEGG: mbo:Mb1369 hypothetical protein YP_641012.1 PFAM: peptidase S58, DmpA; KEGG: mbo:Mb1368 probable hydrolase YP_641013.1 KEGG: mpa:MAP2428c hypothetical protein YP_641014.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA YP_641015.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate YP_641016.1 SMART: Helicase c2 DEAD/DEAH box helicase-like; KEGG: mpa:MAP2431 DinG YP_641017.1 KEGG: mpa:MAP3908 LpqM YP_641018.1 KEGG: mpa:MAP3123c hypothetical protein YP_641019.1 KEGG: sco:SCO4449 hydrolase YP_641020.1 KEGG: mtu:Rv1328 probable glycogen phosphorylase GlgP; TIGRFAM: Alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35 YP_641021.1 PFAM: alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain; KEGG: mbo:Mb1362c probable glucanase GlgE YP_641022.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain YP_641023.1 PFAM: Thioredoxin domain; KEGG: mpa:MAP2435c putative thioredoxin-like protein YP_641024.1 KEGG: nfa:nfa10760 hypothetical protein YP_641025.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis YP_641026.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpa:MAP2437 hypothetical protein YP_641027.1 KEGG: mbo:Mb1356 hypothetical protein YP_641028.1 PFAM: protein of unknown function DUF91; KEGG: mpa:MAP2439c hypothetical protein YP_641029.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase histidine kinase, HAMP region; KEGG: mpa:MAP2440 adenylate cyclase, putative YP_641030.1 activates fatty acids by binding to coenzyme A YP_641031.1 PFAM: helix-turn-helix, AraC type HhH-GPD Ada, metal-binding AlkA-like; KEGG: mtc:MT1358 regulatory protein Ada, putative YP_641032.1 KEGG: mpa:MAP2445 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase methylguanine DNA methyltransferase, ribonuclease-like YP_641033.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_641034.1 TIGRFAM: ATP; PFAM: cobalamin adenosyltransferase; KEGG: mpa:MAP2448 hypothetical protein YP_641035.1 KEGG: mpa:MAP2449c hypothetical protein YP_641036.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane YP_641037.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_641038.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit YP_641039.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_641040.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex YP_641041.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. YP_641042.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 YP_641043.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 YP_641044.1 KEGG: mpa:MAP2458c hypothetical protein YP_641045.1 PFAM: glycosyl transferase, family 4; KEGG: mpa:MAP2459c undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase YP_641046.1 TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: SUA5/yciO/yrdC-like; KEGG: mbo:Mb1333 hypothetical protein YP_641047.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: mpa:MAP2461c protoporphyrinogen oxidase YP_641048.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 YP_641049.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome YP_641050.1 KEGG: sco:SCO6238 hypothetical protein YP_641051.1 PFAM: regulatory protein, MarR; KEGG: sma:SAV6558 putative MarR-family transcriptional regulator YP_641052.1 activates fatty acids by binding to coenzyme A YP_641053.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa24210 putative transcriptional regulator YP_641054.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_641055.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate YP_641056.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine YP_641057.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine YP_641058.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mpa:MAP2469c diaminopimelate decarboxylase YP_641059.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_641060.1 KEGG: mpa:MAP2605c hypothetical protein YP_641061.1 PFAM: Stage II sporulation E; SMART: Protein phosphatase 2C-like; KEGG: cef:CE1201 putative regulatory protein YP_641064.1 PFAM: Alcohol dehydrogenase, zinc-binding; KEGG: sco:SCO7490 oxidoreductase YP_641065.1 PFAM: oxidoreductase-like Oxidoreductase-like; KEGG: ppu:PP2602 oxidoreductase, putative YP_641066.1 PFAM: glycosyl transferase, group 1; KEGG: nfa:nfa41760 putative glycosyltransferase YP_641067.1 PFAM: protein of unknown function DUF899, thioredoxin-like; KEGG: oih:OB0913 hypothetical protein YP_641068.1 PFAM: luciferase-like; KEGG: mpa:MAP2481c hypothetical protein YP_641069.1 PFAM: ATP-binding region, ATPase-like histidine kinase, dimerisation and phosphoacceptor region; KEGG: sco:SCO4597 two-component system sensor kinase YP_641070.1 PFAM: regulatory protein, LuxR response regulator receiver; KEGG: sma:SAV4878 putative two-component system response regulator YP_641071.1 KEGG: sco:SCO2355 lipoprotein YP_641073.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpa:MAP2482 hypothetical protein YP_641074.1 PFAM: General substrate transporter major facilitator superfamily MFS_1; KEGG: ppu:PP4433 amino acid MFS transporter YP_641075.1 PFAM: protein of unknown function DUF1212; KEGG: mbo:Mb3764 probable conserved transmembrane protein YP_641076.1 PFAM: protein of unknown function UPF0074; KEGG: mpa:MAP2483c hypothetical protein YP_641077.1 PFAM: isochorismatase hydrolase; KEGG: sco:SCO2330 isochorismatase YP_641078.1 PFAM: inositol monophosphatase; KEGG: mpa:MAP2058c CysQ_2 YP_641079.1 in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis YP_641080.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_641081.1 PFAM: HNH endonuclease protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mtu:Rv3776 hypothetical protein YP_641082.1 PFAM: carbonic anhydrase; KEGG: fra:Francci3_0216 carbonic anhydrase YP_641083.1 PFAM: glycosyl transferase, family 39; KEGG: fra:Francci3_2390 glycosyl transferase, family 39 YP_641084.1 PFAM: glycosyl transferase, family 2 GtrA-like protein; KEGG: fra:Francci3_0318 glycosyl transferase, family 2 YP_641085.1 PFAM: glycosyl transferase, family 39; KEGG: nfa:nfa53220 hypothetical protein YP_641086.1 PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: mpa:MAP0260 putative two component sensor kinase YP_641087.1 PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mtc:MT3872 DNA-binding response regulator YP_641089.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mbo:Mb1314c probable oligopeptide-transport integral membrane protein ABC transporter OppB YP_641090.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpa:MAP2489 peptide ABC transporter, permease protein YP_641091.1 KEGG: mbo:Mb1312c probable oligopeptide-transport ATP-binding protein ABC transporter OppD; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; PFAM: ABC transporter related Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase YP_641092.1 PFAM: extracellular solute-binding protein, family 5; KEGG: mbo:Mb1311c probable periplasmic oligopeptide-binding lipoprotein OppA YP_641093.1 PFAM: Acyl-CoA dehydrogenase, type 2-like; KEGG: ava:Ava_0104 putative acyl-CoA dehydrogenase YP_641094.1 KEGG: xla:431817 hypothetical protein LOC431817 Pfam: FHA HC2 Ribosomal_L32p PROSITE: ALA_RICH LYS_RICH PRO_RICH FHA_DOMAIN YP_641095.1 KEGG: mpa:MAP2493c hypothetical protein YP_641096.1 PFAM: metallophosphoesterase; KEGG: mpa:MAP2494c hypothetical protein YP_641097.1 PFAM: Phosphoglycerate mutase; KEGG: mtc:MT1313 phosphohistidine phosphatase SixA, putative YP_641098.1 PFAM: Integrase, catalytic region; KEGG: lxx:Lxx22450 transposase, undefined YP_641099.1 KEGG: mbo:Mb1306 putative lipoprotein LprC YP_641100.1 KEGG: mbo:Mb1305 putative lipoprotein LprB YP_641101.1 PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase; KEGG: mpa:MAP2499 probable ABC transporter protein, ATP-binding component YP_641102.1 PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase; KEGG: mbo:Mb1303c probable drugs-transport transmembrane ATP-binding protein ABC transporter YP_641103.1 PFAM: molybdopterin oxidoreductase molydopterin dinucleotide-binding region molybdopterin oxidoreductase Fe4S4 region; KEGG: nfa:nfa29460 putative oxidoreductase YP_641104.1 KEGG: mpa:MAP2506c hypothetical protein YP_641105.1 KEGG: mpa:MAP3835c hypothetical protein YP_641106.1 PFAM: protein of unknown function DUF124; KEGG: tfu:Tfu_0236 hypothetical protein YP_641107.1 PFAM: AMP-dependent synthetase and ligase; KEGG: reu:Reut_B4042 AMP-dependent synthetase and ligase YP_641108.1 PFAM: Heavy metal transport/detoxification protein; KEGG: bms:BR0220 copper-translocating P-type ATPase YP_641109.1 TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter ATPase, P type cation/copper-transporter Heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase Heavy metal transport/detoxification protein E1-E2 ATPase-associated region; KEGG: nfa:nfa1600 putative cation transporter YP_641110.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mpa:MAP2507c hypothetical protein YP_641111.1 KEGG: mpa:MAP2508 hypothetical protein YP_641113.1 PFAM: helix-turn-helix, AraC type; KEGG: nfa:nfa19040 putative transcriptional regulator YP_641114.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nfa:nfa19030 hypothetical protein YP_641115.1 PFAM: histidine triad (HIT) protein; KEGG: mpa:MAP2510 hypothetical protein YP_641116.1 PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mbo:Mb1292c hypothetical protein YP_641117.1 PFAM: luciferase-like; KEGG: mpa:MAP2513c hypothetical protein YP_641118.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: mbo:Mb1289 hypothetical protein YP_641119.1 TIGRFAM: Drug antiporter protein; PFAM: major facilitator superfamily MFS_1; KEGG: mbo:Mb1288c probable conserved integral membrane transport protein YP_641120.1 PFAM: helix-turn-helix, HxlR type; KEGG: sco:SCO6223 hypothetical protein YP_641121.1 KEGG: nar:Saro_2877 hypothetical protein YP_641122.1 PFAM: FAD linked oxidase-like; KEGG: mpa:MAP2517 putative glycolate oxidase YP_641123.1 PFAM: cytochrome P450; KEGG: mtc:MT1295 P450 heme-thiolate protein YP_641124.1 PFAM: regulatory protein, TetR; KEGG: mtc:MT1294 transcriptional regulator, TetR family YP_641125.1 PFAM: sulfatase; KEGG: mbo:Mb0682 possible arylsulfatase AtsD (aryl-sulfate sulphohydrolase) (arylsulphatase) YP_641126.1 PFAM: Siderophore-interacting protein FAD-binding 9, siderophore-interacting; KEGG: nfa:nfa7590 putative siderophore-interacting protein YP_641127.1 PFAM: acyltransferase 3; KEGG: mbo:Mb1286 probable acyltransferase YP_641128.1 PFAM: helicase-like DbpA, RNA-binding DEAD/DEAH box helicase-like; KEGG: mpa:MAP2521c DeaD YP_641129.1 KEGG: mpa:MAP2522 LprE YP_641130.1 KEGG: mbo:Mb1283c hypothetical protein YP_641131.1 TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mpa:MAP2534c hypothetical protein YP_641132.1 TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: tfu:Tfu_1734 drug resistance transporter Bcr/CflA subfamily YP_641133.1 KEGG: mbo:Mb1281c possible membrane protein YP_641134.1 kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth YP_641135.1 PFAM: protein of unknown function DUF732; KEGG: mpa:MAP3461 hypothetical protein YP_641136.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP2537 hypothetical protein YP_641137.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: mtc:MT1281 lipoprotein, putative YP_641138.1 PFAM: malic enzyme-like malic enzyme, NAD-binding; KEGG: mpa:MAP2540c putative malate oxidoreductase YP_641139.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; KEGG: mbo:Mb1271c possible magnesium and cobalt transport transmembrane protein CorA YP_641140.1 KEGG: nfa:nfa47140 hypothetical protein YP_641141.1 PFAM: ABC transporter related Transport-associated OB; SMART: ATPase; KEGG: mpa:MAP2545c probable ABC-transport protein, ATP-binding component YP_641142.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mbo:Mb1269 probable sugar-transport integral membrane protein ABC transporter SugB YP_641143.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mbo:Mb1268 probable sugar-transport integral membrane protein ABC transporter SugA YP_641144.1 PFAM: extracellular solute-binding protein, family 1; KEGG: mbo:Mb1267 probable sugar-binding lipoprotein LpqY YP_641145.1 KEGG: mpa:MAP2549c hypothetical protein YP_641146.1 KEGG: mtc:MT1271 hypothetical protein YP_641147.1 PFAM: HpcH/HpaI aldolase; KEGG: nfa:nfa47160 putative lyase YP_641148.1 PFAM: CBS MgtE intracellular region; KEGG: mbo:Mb1264c hypothetical protein YP_641149.1 PFAM: protein of unknown function DUF1003; KEGG: nfa:nfa47180 hypothetical protein YP_641150.1 KEGG: mpa:MAP2552 hypothetical protein YP_641151.1 PFAM: protein of unknown function DUF59; KEGG: mpa:MAP2553 putative ATP-binding protein YP_641152.1 mediates the export of protein precursors bearing twin-arginine signal peptides YP_641153.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap PDZ/DHR/GLGF; KEGG: mtc:MT1261 heat shock protein HtrA YP_641154.1 KEGG: mpa:MAP2556c hypothetical protein YP_641155.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. tuberculosis this protein is involved in heat shock, oxidative stress and virulence YP_641156.1 PFAM: O-methyltransferase, family 3 Methyltransferase type 11; KEGG: mpa:MAP2558 hypothetical protein YP_641157.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb1251c probable transcriptional regulatory protein YP_641158.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: sma:SAV4541 putative ABC transporter ATP-binding protein YP_641159.1 KEGG: sco:SCO3634 putative ABC transporter membrane-spanning protein YP_641160.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: mbo:Mb1248c probable conserved integral membrane protein YP_641161.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate YP_641162.1 TIGRFAM: glycogen synthase; PFAM: glycosyl transferase, group 1; KEGG: mpa:MAP2565 hypothetical protein YP_641163.1 KEGG: nfa:nfa47235 hypothetical protein YP_641164.1 KEGG: mpa:MAP2567c DNA-3-methyladenine glycosidase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase YP_641165.1 KEGG: mle:ML1065 hypothetical protein YP_641166.1 PFAM: glycosyl transferase, family 2; KEGG: mpa:MAP2569c hypothetical protein YP_641167.1 KEGG: mpa:MAP2570c dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS YP_641168.1 activates fatty acids by binding to coenzyme A; may be involved in acyclic terpene utilization YP_641169.1 PFAM: conserved hypothetical protein 730; KEGG: mpa:MAP2572c hypothetical protein YP_641170.1 SMART: ATPase; KEGG: mbo:Mb1236c hypothetical protein YP_641171.1 KEGG: bur:Bcep18194_A3941 hypothetical protein YP_641172.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: sco:SCO0636 ABC transporter ATP-binding protein YP_641173.1 catalyzes the formation of succinate and diaminoheptanedioate from succinyldiaminoheptanedioate YP_641174.1 KEGG: mbo:Mb1233c probable transferase YP_641175.1 PFAM: beta-lactamase-like Rhodanese-like; KEGG: sco:SCO0618 hypothetical protein YP_641176.1 PFAM: protein of unknown function DUF81; KEGG: tfu:Tfu_3084 conserved hypothetical membrane permease protein YP_641177.1 KEGG: cgb:cg1481 hypothetical protein YP_641178.1 PFAM: protein of unknown function DUF156; KEGG: mbo:Mb1795A hypothetical protein YP_641179.1 PFAM: protein of unknown function DUF302; KEGG: nfa:pnf2630 hypothetical protein YP_641180.1 KEGG: sma:SAV769 hypothetical protein YP_641181.1 activates fatty acids by binding to coenzyme A YP_641182.1 PFAM: NUDIX hydrolase; KEGG: mpa:MAP2477c hypothetical protein YP_641183.1 PFAM: HNH endonuclease protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mbo:Mb2126 hypothetical protein YP_641184.1 KEGG: rso:RS03879 hypothetical protein YP_641185.1 KEGG: mbo:Mb2277 possible secreted unknown protein YP_641186.1 PFAM: Proline dehydrogenase; KEGG: mpa:MAP2592c hypothetical protein YP_641187.1 TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: mpa:MAP2593c 1-pyrroline-5-carboxylate dehydrogenase YP_641188.1 KEGG: mbo:Mb1218c hypothetical protein YP_641189.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP0224c FadE35 YP_641190.1 catalyzes the formation of N-succinyl-LL-2,6-diaminopimelate from N-succinyl-L-2-amino-6-oxopimelate in lysine biosynthesis YP_641191.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: mpa:MAP2607c FdxC_2 YP_641192.1 PFAM: YceI; KEGG: nfa:nfa23500 hypothetical protein YP_641193.1 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; catalyzes radical-mediated transfer of hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); functions in F420 biosynthesis YP_641194.1 KEGG: mpa:MAP2612c hypothetical protein YP_641195.1 PFAM: LmbE-like protein; KEGG: mbo:Mb1203 N-acetyl-1-D-myo-Inosityl-2-amino-2-deoxy-alpha-D- glucopyranoside deacetylase MshB (GlcNAc-Ins deacetylase) YP_641197.1 KEGG: spn:SP1772 cell wall surface anchor family protein YP_641198.1 PFAM: Integrase, catalytic region; KEGG: lxx:Lxx22540 transposase, ISlxx5 YP_641199.1 KEGG: pfa:PFD0207c hypothetical protein YP_641200.1 PFAM: extracellular solute-binding protein, family 5; KEGG: mpa:MAP2615c LpqW YP_641201.1 TIGRFAM: Small GTP-binding protein domain GTP-binding protein TypA; PFAM: elongation factor G-like protein synthesis factor, GTP-binding elongation factor Tu, domain 2; KEGG: mpa:MAP2616c possible GTP-binding, protein elongation factor YP_641202.1 KEGG: nfa:nfa47600 hypothetical protein YP_641204.1 PFAM: NUDIX hydrolase; KEGG: mbo:Mb1192 probable mutator protein MutT2 (7,8-dihydro-8-oxoguanine-triphosphatase) (8-oxo-dgtpase) YP_641205.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction YP_641206.1 involved in the fifth mannose transfer of phosphatidylinositol mannoside synthesis YP_641207.1 KEGG: lma:LmjF35.0290 hypothetical protein, conserved YP_641208.1 KEGG: mpa:MAP2626 hypothetical protein YP_641209.1 KEGG: mtc:MT1192 hypothetical protein YP_641210.1 PFAM: HhH-GPD; KEGG: mpa:MAP2628c hypothetical protein YP_641211.1 PFAM: ATP-binding region, ATPase-like histidine kinase internal region; KEGG: nfa:nfa17980 putative two-component system sensor kinase YP_641212.1 PFAM: response regulator receiver LytTr DNA-binding region; KEGG: nfa:nfa17970 putative two-component system response regulator YP_641213.1 KEGG: nfa:nfa17960 hypothetical protein YP_641214.1 PFAM: Na+/solute symporter; KEGG: nfa:nfa17950 putative transporter YP_641215.1 PFAM: protein of unknown function DUF485; KEGG: nfa:nfa17940 hypothetical protein YP_641216.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: nfa:nfa17930 putative transporter YP_641217.1 PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV2603 putative multi-drug efflux transporter YP_641218.1 KEGG: mpa:MAP2629c hypothetical protein YP_641219.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mpa:MAP2630c hypothetical protein YP_641220.1 PFAM: protein of unknown function DUF1697; KEGG: mbo:Mb1185c hypothetical protein YP_641221.1 PFAM: O-methyltransferase-like; KEGG: mtc:MT1187 O-methyltransferase, putative YP_641222.1 PFAM: regulatory protein GntR, HTH; KEGG: mpa:MAP2632c hypothetical protein YP_641223.1 Modulates the activities of several enzymes which are inactive in their acetylated form YP_641224.1 PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: mbo:Mb1178 hypothetical protein YP_641225.1 PFAM: MMPL; KEGG: mbo:Mb1177 probable conserved transmembrane transport protein MmpL13 YP_641226.1 PFAM: TQO small subunit DoxD DoxX; KEGG: nfa:nfa43370 hypothetical protein YP_641227.1 KEGG: mtc:MT1178 hypothetical protein YP_641228.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: nfa:nfa55910 putative dioxygenase YP_641229.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP2637c 3-hydroxyacyl-CoA dehydrogenase YP_641230.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mpa:MAP2638c Mcr YP_641231.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_641232.1 PFAM: HicB; KEGG: mpa:MAP2040c hypothetical protein YP_641233.1 PFAM: Abortive infection protein; KEGG: mpa:MAP2640c hypothetical protein YP_641234.1 PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase dTDP-4-dehydrorhamnose reductase NmrA-like; KEGG: mpa:MAP2641c hypothetical protein YP_641235.1 PFAM: regulatory protein, TetR; KEGG: sma:SAV4530 putative TetR-family transcriptional regulator YP_641236.1 PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_B2914 aldo/keto reductase YP_641237.1 KEGG: nfa:nfa16240 hypothetical protein YP_641238.1 PFAM: beta-Ig-H3/fasciclin; KEGG: mbo:Mb2900 major secreted immunogenic protein MPB70 precursor YP_641239.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: nfa:nfa38250 putative acyl-CoA dehydrogenase YP_641240.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP2645c EchA1_1 YP_641241.1 PFAM: Thiolase; KEGG: mpa:MAP2646c FadA6_3 YP_641242.1 PFAM: regulatory protein GntR, HTH GntR-like; KEGG: fra:Francci3_2979 regulatory protein GntR, HTH YP_641243.1 KEGG: mpa:MAP2662c hypothetical protein YP_641244.1 PFAM: DoxX; KEGG: mpa:MAP2663c hypothetical protein YP_641245.1 PFAM: protein of unknown function UPF0089; KEGG: mbo:Mb1156 hypothetical protein YP_641246.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: pac:PPA0330 putative short chain dehydrogenase YP_641247.1 PFAM: alpha/beta hydrolase fold; KEGG: mbo:Mb1155 probable epoxide hydrolase EphC (epoxide hydratase) YP_641248.1 KEGG: mtc:MT2024.1 hypothetical protein YP_641249.1 KEGG: mtc:MT2024 hypothetical protein YP_641250.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: mpa:MAP2668c hypothetical protein YP_641251.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP2669 BpoB YP_641252.1 PFAM: aminoglycoside phosphotransferase aminotransferase class-III; KEGG: ret:RHE_CH00224 probable aminotransferase protein YP_641253.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mpa:MAP2672 hypothetical protein YP_641254.1 KEGG: mbo:Mb1149c hypothetical protein YP_641255.1 PFAM: beta-lactamase; KEGG: bur:Bcep18194_C7182 serine-type D-Ala-D-Ala carboxypeptidase YP_641256.1 PFAM: protein of unknown function DUF1486 Activator of Hsp90 ATPase homologue 1-like; KEGG: psp:PSPPH_1248 protein of unknown function (DUF1486) superfamily YP_641257.1 KEGG: bps:BPSS0778 hypothetical protein YP_641258.1 PFAM: Rhodanese-like regulatory protein, ArsR; KEGG: bur:Bcep18194_B2905 transcriptional regulator, ArsR family YP_641259.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2904 major facilitator superfamily (MFS_1) transporter YP_641260.1 PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: ade:Adeh_3487 methyltransferase type 11 YP_641262.1 KEGG: bca:BCE2962 hypothetical protein YP_641263.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_641264.1 KEGG: mbo:Mb1141c hypothetical protein YP_641266.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_641267.1 KEGG: mpa:MAP2685 hypothetical protein YP_641268.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides YP_641269.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; KEGG: mpa:MAP2687 exodeoxyribonuclease small subunit YP_641270.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR 3-beta hydroxysteroid dehydrogenase/isomerase polysaccharide biosynthesis protein CapD dTDP-4-dehydrorhamnose reductase Male sterility-like; KEGG: mpa:MAP2688 hypothetical protein YP_641272.1 PFAM: MgtC/SapB transporter; KEGG: lxx:Lxx21180 Mg++ transport, ATPase protein YP_641274.1 PFAM: sulfatase; KEGG: mma:MM1892 arylsulfatase YP_641275.1 KEGG: reu:Reut_A2894 putative nonspecific acid phosphatase precursor YP_641276.1 PFAM: protein of unknown function DUF323; KEGG: mlo:mll5466 hypothetical protein YP_641277.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa24180 putative short chain dehydrogenase YP_641278.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bca:BCE2681 short chain dehydrogenase family protein [imported] YP_641279.1 PFAM: protein of unknown function UPF0118; KEGG: mtc:MT1133 membrane protein, putative YP_641280.1 KEGG: mpa:MAP2690c hypothetical protein YP_641281.1 KEGG: mbo:Mb1130 hypothetical protein YP_641282.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese YP_641283.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle YP_641284.1 PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase Male sterility-like; KEGG: nfa:nfa24130 hypothetical protein YP_641285.1 KEGG: mbo:Mb3155 hypothetical protein YP_641286.1 PFAM: GAF ATP-binding region, ATPase-like histidine kinase, dimerisation and phosphoacceptor region; KEGG: mtc:MT2086 GAF family protein YP_641287.1 PFAM: regulatory protein, LuxR response regulator receiver Sigma-70, region 4 type 2; KEGG: mbo:Mb3157c two component transcriptional regulatory protein DevR (probably luxR/uhpA-family) YP_641288.1 PFAM: UspA; KEGG: mbo:Mb2053c hypothetical protein YP_641289.1 KEGG: mtc:MT2091 hypothetical protein YP_641290.1 PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc; KEGG: mbo:Mb1125 probable PhoH-like protein PhoH2 (phosphate starvation-inducible protein PsiH) YP_641291.1 PFAM: fatty acid desaturase, type 2; KEGG: mbo:Mb1124 possible acyl-[acyl-carrier protein] desaturase DesA2 (acyl-[ACP] desaturase) (stearoyl-ACP desaturase) YP_641292.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_641293.1 KEGG: nfa:nfa48160 hypothetical protein YP_641294.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis YP_641295.1 KEGG: mpa:MAP2257 hypothetical protein YP_641296.1 KEGG: mpa:MAP2701c hypothetical protein YP_641297.1 KEGG: mpa:MAP2702c hypothetical protein YP_641298.1 KEGG: mpa:MAP2703c putative undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_641299.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III related proteins; KEGG: mbo:Mb1114c possible hemolysin-like protein YP_641300.1 PFAM: nuclear transport factor 2; KEGG: mpa:MAP2705c hypothetical protein YP_641301.1 PFAM: protein of unknown function DUF255; KEGG: mbo:Mb1113 hypothetical protein YP_641302.1 KEGG: mpa:MAP2707c hypothetical protein YP_641303.1 PFAM: LmbE-like protein; KEGG: mbo:Mb1111 mycothiol conjugate amidase Mca (mycothiol S-conjugate amidase) YP_641304.1 KEGG: mbo:Mb1110c probable conserved membrane protein YP_641305.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus YP_641306.1 KEGG: sco:SCO4440 hypothetical protein YP_641307.1 catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine YP_641308.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: nfa:nfa48280 putative acyl-CoA dehydrogenase YP_641309.1 KEGG: mpa:MAP1071c hypothetical protein YP_641310.1 KEGG: mbo:Mb1106 probable cystathionine beta-synthase CBS (serine sulfhydrase) (beta-thionase) (hemoprotein H-450); TIGRFAM: cystathionine beta-synthase; PFAM: CBS Pyridoxal-5'-phosphate-dependent enzyme, beta subunit YP_641311.1 PFAM: Alpha/beta hydrolase fold-3; KEGG: mpa:MAP1023 LipU YP_641312.1 PFAM: lipolytic enzyme, G-D-S-L; KEGG: mpa:MAP1022c hypothetical protein YP_641313.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_641314.1 KEGG: mbo:Mb1102 hypothetical protein YP_641315.1 PFAM: protein of unknown function DUF1112; KEGG: mpa:MAP1019 hypothetical protein YP_641316.1 catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA YP_641317.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_641318.1 KEGG: mbo:Mb1098c hypothetical protein YP_641323.1 KEGG: mtc:MT2732 hypothetical protein YP_641324.1 KEGG: nfa:pnf11020 hypothetical protein YP_641325.1 KEGG: mbo:Mb1610c possible phiRv1 phage protein YP_641327.1 PFAM: Resolvase-like Recombinase; KEGG: mbo:Mb1612c probable phiRv1 integrase YP_641328.1 SMART: Rhodanese-like; KEGG: mbo:Mb1095 hypothetical protein YP_641329.1 PFAM: cysteine dioxygenase type I; KEGG: mpa:MAP1014 hypothetical protein YP_641330.1 KEGG: mpa:MAP1013c LpqV YP_641331.1 PFAM: Patatin; KEGG: mbo:Mb1092c hypothetical protein YP_641332.1 PFAM: Patatin; KEGG: mtc:MT1092 hypothetical protein YP_641333.1 PFAM: MOSC; KEGG: mbo:Mb1895c hypothetical protein YP_641334.1 PFAM: dihydrodipicolinate reductase; KEGG: mbo:Mb1088 hypothetical protein YP_641335.1 KEGG: mpa:MAP2897c acetyl-CoA acyltransferase YP_641337.1 PFAM: sodium:dicarboxylate symporter; KEGG: nfa:nfa46330 putative sodium:dicarboxylate symporter YP_641338.1 PFAM: ATP-binding region, ATPase-like; KEGG: nfa:nfa46340 putative two-component system sensor kinase YP_641339.1 PFAM: response regulator receiver; KEGG: nfa:nfa46350 putative two-component system response regulator YP_641340.1 KEGG: mbo:Mb1086 hypothetical protein YP_641341.1 PFAM: Peptidoglycan-binding domain 1 N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: mbo:Mb3625 hypothetical protein YP_641342.1 PFAM: Cupin 2, conserved barrel; KEGG: reu:Reut_A1491 cupin:protein of unknown function DUF861 YP_641343.1 PFAM: putative esterase; KEGG: mpa:MAP3531c esterase, putative, antigen 85-C YP_641344.1 KEGG: mpa:MAP3753 hypothetical protein YP_641346.1 PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: bja:bll3347 unknown protein YP_641347.1 PFAM: peptidase M15D, vanX D-ala-D-ala dipeptidase; KEGG: sco:SCO1396 D-alanyl-D-alanine dipeptidase (putative secreted protein) YP_641348.1 KEGG: ade:Adeh_0244 LigA YP_641349.1 PFAM: cation efflux protein; KEGG: nfa:nfa26310 hypothetical protein YP_641350.1 PFAM: regulatory protein, ArsR Helix-turn-helix, type 11; KEGG: nfa:nfa26300 putative transcriptional regulator YP_641351.1 TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: bpa:BPP1888 L-2,4-diaminobutyric acid acetyltransferase YP_641352.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde YP_641353.1 N-acetyldiaminobutyrate dehydratase; catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha,gamma-diaminobutyric acid YP_641354.1 TIGRFAM: Ectoine hydroxylase; PFAM: Phytanoyl-CoA dioxygenase; KEGG: nfa:nfa27190 putative ectoine hydroxylase YP_641356.1 PFAM: superoxide dismutase, copper/zinc binding; KEGG: mpa:MAP4272c hypothetical protein YP_641357.1 KEGG: mtc:MT0870 hypothetical protein YP_641358.1 PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: mtu:Rv0848 cysteine synthase YP_641359.1 PFAM: major facilitator superfamily MFS_1; KEGG: nfa:pnf1250 putative transporter YP_641360.1 SMART: Rhodanese-like; KEGG: ade:Adeh_2652 rhodanese-like protein YP_641361.1 PFAM: Cl- channel, voltage gated; KEGG: mta:Moth_1588 Cl-channel, voltage gated YP_641362.1 PFAM: cytochrome P450; KEGG: mpa:MAP0704 hypothetical protein YP_641363.1 KEGG: sma:SAV1610 putative ferredoxin YP_641364.1 PFAM: regulatory protein, TetR; KEGG: sco:SCO0310 TetR-family transcriptional regulator YP_641367.1 PFAM: alpha/beta hydrolase fold; KEGG: ade:Adeh_3732 alpha/beta hydrolase fold-1 YP_641371.1 PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mpa:MAP4018c hypothetical protein YP_641372.1 PFAM: putative RNA methylase UbiE/COQ5 methyltransferase Methyltransferase type 11 Methyltransferase type 12; KEGG: ade:Adeh_2268 methyltransferase type 11 YP_641373.1 KEGG: sma:SAV1062 hypothetical protein YP_641374.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP2745c hypothetical protein YP_641375.1 Catalyzes the rate-limiting step in dNTP synthesis YP_641376.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb0237 probable transcriptional regulatory protein (probably TetR/AcrR-family) YP_641377.1 PFAM: Carboxylesterase, type B; KEGG: sco:SCO5067 carboxylesterase YP_641378.1 PFAM: beta-lactamase-like; KEGG: sco:SCO5066 beta-lactamase YP_641379.1 SMART: Helix-turn-helix type 3; KEGG: sco:SCO4944 DNA-binding protein YP_641380.1 PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mpa:MAP4018c hypothetical protein YP_641382.1 PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO6809 integral membrane transport protein YP_641383.1 PFAM: regulatory protein, TetR; KEGG: bbr:BB1198 putative TetR-family transcriptional regulator YP_641384.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_1483 major facilitator family transporter YP_641385.1 PFAM: Endoribonuclease L-PSP; KEGG: sco:SCO7483 hypothetical protein YP_641386.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mpa:MAP0986c putative diaminopimelate decarboxylase YP_641387.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions YP_641388.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions YP_641389.1 PFAM: K+ transporting ATPase, KdpC subunit; KEGG: mpa:MAP0997c putative cation transport system component YP_641390.1 PFAM: ATP-binding region, ATPase-like histidine kinase A-like Osmosensitive K+ channel His kinase sensor UspA; KEGG: mtc:MT1057 sensor histidine kinase KdpD YP_641391.1 PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mpa:MAP0995c two-component response regulator YP_641392.1 PFAM: AMP-dependent synthetase and ligase; KEGG: plt:Plut_1288 propionate--CoA ligase YP_641393.1 PFAM: HNH endonuclease protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mpa:MAP1884c hypothetical protein YP_641394.1 KEGG: nfa:nfa45010 hypothetical protein YP_641395.1 KEGG: sco:SCO7819 putative integral membrane protein YP_641396.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: nfa:nfa26340 hypothetical protein YP_641397.1 PFAM: Radical SAM; KEGG: nfa:nfa26360 hypothetical protein YP_641398.1 PFAM: Ppx/GppA phosphatase; KEGG: mpa:MAP0993 hypothetical protein YP_641399.1 PFAM: protein of unknown function DUF501; KEGG: mpa:MAP0992 hypothetical protein YP_641400.1 PFAM: Septum formation initiator; KEGG: mpa:MAP0991 hypothetical protein YP_641401.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_641402.1 KEGG: mbo:Mb1050 putative conserved lipoprotein LpqU YP_641403.1 PFAM: protein of unknown function DUF451; KEGG: ecs:ECs1264 putative lipoprotein YP_641404.1 TIGRFAM: Twin-arginine translocation pathway signal Tat-translocated enzyme; PFAM: Dyp-type peroxidase; KEGG: ecs:ECs1265 putative iron-dependent peroxidase YP_641405.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era YP_641406.1 TIGRFAM: transcription-repair coupling factor; PFAM: helicase-like transcription factor CarD TRCF DEAD/DEAH box helicase-like; KEGG: mpa:MAP0987 Mfd YP_641407.1 KEGG: mbo:Mb2186c conserved hypothetical protein, PE_PGRS YP_641408.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0985 hypothetical protein YP_641409.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis YP_641410.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP YP_641411.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: mpa:MAP0982c putative arsenate reductase YP_641412.1 KEGG: mtc:MT1044 lipoprotein, putative YP_641413.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0980c hypothetical protein YP_641414.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_641415.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_641416.1 PFAM: protein of unknown function DUF1130; KEGG: bbr:BB2477 hypothetical protein YP_641417.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: mca:MCA2813 4Fe-4S binding domain protein YP_641418.1 KEGG: mbo:Mb2660c hypothetical protein YP_641419.1 PFAM: protein of unknown function UPF0089; KEGG: mbo:Mb3766c hypothetical protein YP_641420.1 PFAM: ABC-2 type transporter; KEGG: nfa:nfa720 putative ABC transporter membrane protein YP_641421.1 KEGG: sco:SCO4963 putative ABC transporter ATP-binding protein; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: ATPase YP_641422.1 activates fatty acids by binding to coenzyme A YP_641423.1 catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis YP_641424.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin YP_641425.1 PFAM: protein of unknown function DUF348 Transglycosylase-like G5; KEGG: mtc:MT1038 hypothetical protein YP_641426.1 PFAM: TatD-related deoxyribonuclease; KEGG: mpa:MAP0973 putative deoxyribonuclease YP_641427.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_641428.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer YP_641429.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpa:MAP0947c hypothetical protein YP_641430.1 PFAM: sigma-70 region 2 sigma-70 region 4 Sigma-70, region 4 type 2; KEGG: mpa:MAP0946c putative RNA polymerase ECF-subfamily sigma factor YP_641431.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpa:MAP0947c hypothetical protein YP_641432.1 PFAM: sigma-70 region 2 sigma-70 region 4 Sigma-70, region 4 type 2; KEGG: mpa:MAP0946c putative RNA polymerase ECF-subfamily sigma factor YP_641433.1 catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine YP_641434.1 TIGRFAM: Protein of unknown function UPF0011; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mpa:MAP0944 hypothetical protein YP_641435.1 PFAM: glycosyl transferase, family 39; KEGG: mtc:MT1031 hypothetical protein YP_641436.1 KEGG: mpa:MAP2795 hypothetical protein YP_641437.1 catalyzes the degradation of arginine to citruline and ammonia YP_641438.1 TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: regulatory protein, MerR; KEGG: nfa:nfa49080 putative transcriptional regulator YP_641439.1 KEGG: mbo:Mb1027c hypothetical protein YP_641440.1 KEGG: mpa:MAP0940 hypothetical protein YP_641441.1 KEGG: mpa:MAP0939 hypothetical protein YP_641442.1 PFAM: PE-PPE-like; KEGG: mbo:Mb2640 PPE family protein YP_641443.1 KEGG: mpa:MAP4075c LpqN YP_641444.1 catalyzes the conversion of shikimate to 3-dehydroshikimate YP_641445.1 PFAM: GCN5-related N-acetyltransferase cyclic nucleotide-binding; KEGG: mpa:MAP0938 hypothetical protein YP_641447.1 PFAM: protein of unknown function DUF1214 protein of unknown function DUF1254; KEGG: mlo:mll5470 hypothetical protein YP_641448.1 KEGG: mtc:MT1025 hypothetical protein YP_641449.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpa:MAP0926 ribosomal-protein-alanine acetyltransferase YP_641450.1 PFAM: molybdopterin binding domain MoeA-like, domain I and II MoeA-like, domain IV; KEGG: mbo:Mb1021 probable molybdopterin biosynthesis protein MoeA1 YP_641451.1 PFAM: Nucleotidyl transferase; KEGG: mbo:Mb1020 probable UTP--glucose-1-phosphate uridylyltransferase GalU (UDP-glucose pyrophosphorylase) (UDPGP) (alpha-D-glucosyl-1-phosphate uridylyltransferase) (uridine diphosphoglucose pyrophosphorylase) YP_641452.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: mbo:Mb1019c hypothetical protein YP_641453.1 TIGRFAM: Putative regulatory protein, FmdB; KEGG: mtc:MT1020 hypothetical protein YP_641454.1 KEGG: mbo:Mb1017c hypothetical protein YP_641455.1 forms homopentamer; channel that opens in response to pressure or hypoosmotic shock YP_641456.1 PFAM: Integrase, catalytic region; KEGG: lxx:Lxx22540 transposase, ISlxx5 YP_641459.1 PFAM: molybdopterin binding domain; KEGG: mbo:Mb1010 possible pterin-4-alpha-carbinolamine dehydratase MoaB2 (PHS) (4-alpha-hydroxy-tetrahydropterin dehydratase) (pterin-4-A-carbinolamine dehydratase) (phenylalanine hydroxylase-stimulating protein) (PHS) (pterin carbinolamine dehydratase) (PCD) YP_641460.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap PDZ/DHR/GLGF; KEGG: mpa:MAP0918 putative serine protease YP_641461.1 PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: mpa:MAP0917 putative two-component system sensor kinase YP_641462.1 PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mpa:MAP0916 two-component response regulator YP_641463.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_641465.1 PFAM: protein of unknown function DUF1446; KEGG: mbo:Mb1001c hypothetical protein YP_641466.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP0913c acyl-CoA dehydrogenase YP_641467.1 PFAM: carboxyl transferase; KEGG: mbo:Mb0999c probable acetyl-/propionyl-CoA carboxylase (beta subunit) accd2 YP_641468.1 PFAM: biotin/lipoyl attachment Carbamoyl-phosphate synthase L chain, ATP-binding Carbamoyl-phosphate synthetase large chain-like biotin carboxylase-like; KEGG: mpa:MAP0911c propionyl-CoA carboxylase alpha chain YP_641469.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mtc:MT1000 acyl-CoA dehydrogenase YP_641470.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_641471.1 PFAM: protein of unknown function DUF1707; KEGG: mtc:MT0994 hypothetical protein YP_641472.1 PFAM: PE-PPE-like; KEGG: mbo:Mb2640 PPE family protein YP_641473.1 KEGG: mbo:Mb0157c PE family protein YP_641474.1 SMART: von Willebrand factor, type A; KEGG: mpa:MAP0906 hypothetical protein YP_641475.1 KEGG: mbo:Mb0983 possible magnesium chelatase YP_641476.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS Xanthine/uracil/vitamin C permease sulphate transporter; KEGG: cef:CE0944 putative transport protein YP_641477.1 PFAM: regulatory protein, ArsR; KEGG: cef:CE0945 putative transcription regulator YP_641478.1 PFAM: protein kinase; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: mbo:Mb1775 anchored-membrane serine/threonine-protein kinase PknF (protein kinase F) (StpK F) YP_641479.1 TIGRFAM: GGDEF domain; PFAM: GGDEF; KEGG: rsp:RSP_0413 two component diguanylate cyclase YP_641480.1 involved in de novo purine biosynthesis YP_641481.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate YP_641482.1 KEGG: mpa:MAP0901 hypothetical protein YP_641483.1 KEGG: mpa:MAP0900 hypothetical protein YP_641484.1 PFAM: luciferase-like; KEGG: nfa:nfa54330 putative monooxygenase YP_641485.1 PFAM: luciferase-like; KEGG: mpa:MAP0899c hypothetical protein YP_641486.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_641487.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle YP_641488.1 catalyzes the interconversion of succinyl-CoA and succinate YP_641489.1 PFAM: peptidase M23B; KEGG: mpa:MAP0895c hypothetical protein YP_641490.1 KEGG: mpa:MAP0894c hypothetical protein YP_641491.1 TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: mpa:MAP0893 DNA helicase II YP_641492.1 TIGRFAM: Chorismate mutase, high GC G-positive and archaeal; KEGG: mpa:MAP0892c hypothetical protein YP_641493.1 PFAM: acyltransferase 3; KEGG: mpa:MAP3514 hypothetical protein YP_641494.1 PFAM: aldehyde dehydrogenase; KEGG: nfa:nfa49970 putative aldehyde dehydrogenase YP_641495.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family YP_641496.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0890 putative short-chain type dehydrogenase/reductase YP_641497.1 PFAM: Formamidopyrimidine-DNA glycolase; KEGG: mpa:MAP0889 putative formamidopyrimidine-DNA glycosylase YP_641498.1 PFAM: membrane protein of unknown function; KEGG: mbo:Mb1938 probable conserved membrane protein YP_641499.1 catalyzes the formation of precorrin 6x from precorrin 5 YP_641500.1 TIGRFAM: ribonuclease BN, putative; PFAM: ribonuclease BN; KEGG: lxx:Lxx00730 membrane protein YP_641501.1 PFAM: thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate enzyme, central region thiamine pyrophosphate enzyme-like TPP binding region; KEGG: cef:CE1124 putative pyruvate oxidase YP_641502.1 PFAM: major facilitator superfamily MFS_1; KEGG: cte:CT0198 MFS transporter family protein YP_641503.1 KEGG: nfa:nfa23230 hypothetical protein YP_641504.1 KEGG: mpa:MAP0884c hypothetical protein YP_641505.1 PFAM: helix-turn-helix, AraC type; KEGG: mpa:MAP3230c hypothetical protein YP_641506.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: fra:Francci3_0367 short-chain dehydrogenase/reductase SDR YP_641508.1 PFAM: Forkhead-associated; KEGG: nfa:nfa4130 hypothetical protein YP_641509.1 PFAM: protein kinase Kelch repeat Kelch; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: mbo:Mb3107c probable serine/threonine-protein kinase transcriptional regulatory protein PknK (protein kinase K) (STPK K) YP_641510.1 KEGG: bja:blr2834 hypothetical protein YP_641511.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids YP_641512.1 PFAM: protein of unknown function DUF222; KEGG: mtu:Rv1128c hypothetical protein Rv1128c YP_641513.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity YP_641514.1 KEGG: mbo:Mb3546 hypothetical protein YP_641515.1 PFAM: ABC transporter related Transport-associated OB; SMART: ATPase; KEGG: sco:SCO4240 ABC transporter ATP-binding protein YP_641516.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV6355 putative integral membrane sugar transport protein YP_641517.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO1899 putative integral membrane sugar transport protein YP_641518.1 PFAM: extracellular solute-binding protein, family 1; KEGG: sco:SCO1898 putative substrate binding protein YP_641519.1 PFAM: putative sugar-binding region; KEGG: atc:AGR_C_3494 hypothetical protein YP_641520.1 PFAM: Mannitol dehydrogenase-like Mannitol dehydrogenase rossman-like; KEGG: mpa:MAP0877c hypothetical protein YP_641521.1 PFAM: PfkB; KEGG: mpa:MAP0876c putative fructokinase YP_641522.1 PFAM: Ku; KEGG: mpa:MAP0875c hypothetical protein YP_641523.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR Male sterility-like; KEGG: mpa:MAP0871c 7-alpha-hydroxysteroid dehydrogenase YP_641524.1 PFAM: dihydrodipicolinate reductase; KEGG: mpa:MAP0870c hypothetical protein YP_641527.1 TIGRFAM: NRAMP family Mn2+/Fe2+ transporters; PFAM: natural resistance-associated macrophage protein; KEGG: mbo:Mb0948c divalent cation-transport integral membrane protein MntH (BRAMP) (MRAMP) YP_641528.1 PFAM: protein of unknown function DUF867; KEGG: mpa:MAP0868c hypothetical protein YP_641529.1 PFAM: amino acid permease-associated region; KEGG: pfl:PFL_6168 amino acid permease YP_641530.1 PFAM: Amidohydrolase 3; KEGG: gvi:glr0375 hypothetical protein YP_641531.1 PFAM: protein of unknown function DUF1365; KEGG: mtc:MT0464 hypothetical protein YP_641532.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. bovis this protein has been shown to be involved in expression of antigenic proteins YP_641533.1 KEGG: mtc:MT0460 hypothetical protein YP_641534.1 PFAM: luciferase-like; KEGG: mpa:MAP0867c hypothetical protein YP_641535.1 KEGG: dar:Daro_3193 hypothetical protein YP_641536.1 PFAM: cytochrome c oxidase, subunit III; KEGG: norE; cytochrome c oxidase, subunit III family protein YP_641537.1 KEGG: mpa:MAP0771 hypothetical protein YP_641539.1 PFAM: ANTAR; KEGG: mpa:MAP3540c hypothetical protein YP_641540.1 PFAM: heat shock protein Hsp20; KEGG: nfa:nfa8400 putative heat shock protein YP_641541.1 KEGG: mpa:MAP0846 hypothetical protein YP_641542.1 PFAM: protein of unknown function DUF985; KEGG: fra:Francci3_3686 protein of unknown function DUF985 YP_641543.1 PFAM: protein of unknown function DUF849; KEGG: sco:SCO1696 hypothetical protein YP_641544.1 PFAM: regulatory protein GntR, HTH GntR-like; KEGG: cef:CE2757 putative transcription regulator YP_641545.1 PFAM: protein of unknown function DUF224, cysteine-rich region; KEGG: dra:DR1907 fumarate reductase-related protein YP_641546.1 TIGRFAM: Iron-sulfur cluster binding protein; KEGG: sma:SAV7411 putative iron-sulfur protein YP_641547.1 PFAM: protein of unknown function DUF162; KEGG: dra:DR1909 hypothetical protein YP_641548.1 PFAM: regulatory protein, LacI periplasmic binding protein/LacI transcriptional regulator; KEGG: nfa:nfa32970 putative transcriptional regulator YP_641549.1 PFAM: carbohydrate kinase, FGGY; KEGG: nfa:nfa32950 putative rhamnulokinase YP_641550.1 TIGRFAM: Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: class II aldolase/adducin-like short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa32940 putative oxidoreductase YP_641551.1 TIGRFAM: Rhamnose isomerase related; PFAM: Xylose isomerase-like TIM barrel; KEGG: nfa:nfa32930 putative sugar isomerase YP_641552.1 PFAM: General substrate transporter major facilitator superfamily MFS_1; KEGG: nfa:nfa32920 putative sugar transporter YP_641553.1 PFAM: protein of unknown function DUF718; KEGG: nfa:nfa32910 hypothetical protein YP_641554.1 PFAM: amidohydrolase 2; KEGG: cgb:cg0345 metal-dependent hydrolase of the TIM-barrel fold YP_641555.1 PFAM: aldehyde dehydrogenase; KEGG: mpa:MAP3513 aldehyde dehydrogenase YP_641556.1 PFAM: thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate enzyme, central region thiamine pyrophosphate enzyme-like TPP binding region; KEGG: mpa:MAP3512 hypothetical protein YP_641557.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: sco:SCO1197 putative acyl-CoA dehydrogenase YP_641558.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: sma:SAV3839 putative acyl-CoA dehydrogenase YP_641559.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP0683 hypothetical protein YP_641560.1 PFAM: oxidoreductase-like Oxidoreductase-like; KEGG: gvi:glr4349 probable oxidoreductase YP_641561.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP2353 hypothetical protein YP_641562.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP2352 hypothetical protein YP_641563.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mpa:MAP3511 hypothetical protein YP_641564.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3510 hypothetical protein YP_641565.1 PFAM: FAD dependent oxidoreductase; KEGG: mpa:MAP3509 hypothetical protein YP_641566.1 PFAM: Rieske [2Fe-2S] region; KEGG: mpa:MAP3508 hypothetical protein YP_641567.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3507 hypothetical protein YP_641568.1 PFAM: NHL repeat; KEGG: mpa:MAP3506c hypothetical protein YP_641569.1 PFAM: regulatory protein GntR, HTH UbiC transcription regulator-associated; KEGG: mpa:MAP3505c hypothetical protein YP_641570.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP3504c hypothetical protein YP_641571.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3503c hypothetical protein YP_641572.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sil:SPO1014 AMP-binding enzyme YP_641573.1 KEGG: mpa:MAP1786c hypothetical protein YP_641574.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1787c hypothetical protein YP_641575.1 KEGG: mpa:MAP1789 hypothetical protein YP_641576.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP1788 hypothetical protein YP_641577.1 KEGG: mpa:MAP1790 MorD YP_641578.1 PFAM: ATPase associated with various cellular activities, AAA_5 CbbQ/NirQ/NorQ-like; KEGG: mpa:MAP1791 NorQ YP_641579.1 KEGG: mpa:MAP1789 hypothetical protein YP_641580.1 KEGG: mpa:MAP1794 hypothetical protein YP_641581.1 PFAM: dihydrodipicolinate reductase; KEGG: mpa:MAP0349 hypothetical protein YP_641582.1 PFAM: cytochrome P450; KEGG: mtc:MT1834 P450 heme-thiolate protein YP_641583.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP1788 hypothetical protein YP_641584.1 PFAM: NAD-dependent epimerase/dehydratase Male sterility-like; KEGG: tfu:Tfu_2676 hypothetical protein YP_641585.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B2445 alpha/beta hydrolase YP_641586.1 KEGG: mpa:MAP0845 hypothetical protein YP_641587.1 KEGG: nfa:nfa17300 hypothetical protein YP_641588.1 TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: Haloacid dehalogenase-like hydrolase E1-E2 ATPase-associated region; KEGG: mbo:Mb0932 probable metal cation transporter ATPase P-type CtpE YP_641589.1 PFAM: beta-lactamase; KEGG: mpa:MAP0842 hypothetical protein YP_641590.1 KEGG: mbo:Mb0930 hypothetical protein YP_641591.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_641592.1 PFAM: carboxyl transferase; KEGG: mpa:MAP0839c acetyl-CoA carboxylase carboxyl transferase YP_641594.1 KEGG: nfa:nfa28200 hypothetical protein YP_641597.1 activates fatty acids by binding to coenzyme A YP_641598.1 PFAM: AMP-dependent synthetase and ligase; KEGG: tfu:Tfu_2808 putative acetyl-coenzyme A synthetase YP_641599.1 PFAM: regulatory protein, LuxR GAF; KEGG: nfa:nfa41520 putative transcriptional regulator YP_641600.1 PFAM: Epoxide hydrolase-like; KEGG: mpa:MAP1989c hypothetical protein YP_641601.1 KEGG: mpa:MAP4216 hypothetical protein YP_641602.1 TIGRFAM: GGDEF domain; PFAM: GGDEF; KEGG: gsu:GSU2313 response regulator YP_641603.1 KEGG: mpa:MAP2795 hypothetical protein YP_641604.1 PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase; KEGG: nfa:nfa21480 putative ABC transporter YP_641605.1 PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase; KEGG: sma:SAV2790 putative ABC transporter ATP-binding protein YP_641606.1 PFAM: ABC transporter, transmembrane region ABC transporter related; SMART: ATPase; KEGG: sma:SAV7218 putative ABC-transport protein YP_641607.1 PFAM: Ion transport protein Ion transport 2; KEGG: blo:BL0664 possible voltage-gated potassium channel protein YP_641608.1 PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mbo:Mb0927c two component response transcriptional regulatory protein PrrA YP_641609.1 PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: mbo:Mb0926c two component sensor histidine kinase PrrB YP_641610.1 PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: lxx:Lxx08960 FKBP-type peptidyl-prolyl cis-trans isomerase YP_641611.1 KEGG: mpa:MAP0831c hypothetical protein YP_641612.1 KEGG: mpa:MAP0830c hypothetical protein YP_641614.1 PFAM: regulatory protein, MarR; KEGG: sco:SCO2398 MarR-family transcriptonal regulator YP_641615.1 TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO2498 efflux protein YP_641616.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH YP_641617.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa9400 putative transcriptional regulator YP_641618.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate YP_641619.1 forms citrate from oxaloacetate and acetyl-CoA; functions in TCA cycle YP_641621.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpa:MAP0826c PhnB protein YP_641622.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpa:MAP0825 ferredoxin, ferredoxin-NADP reductase YP_641623.1 KEGG: mbo:Mb0909 hypothetical protein YP_641624.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate YP_641625.1 KEGG: mbo:Mb0907c hypothetical protein YP_641626.1 KEGG: mbo:Mb0906 probable transmembrane protein YP_641627.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mpa:MAP0820 putative RNA methyltransferase YP_641628.1 PFAM: regulatory protein, MarR; KEGG: mpa:MAP0819 hypothetical protein YP_641629.1 KEGG: mle:ML2141 hypothetical protein YP_641630.1 KEGG: mpa:MAP0817c hypothetical protein YP_641631.1 KEGG: mbo:Mb0901 hypothetical protein YP_641632.1 PFAM: major facilitator superfamily MFS_1; KEGG: mtc:MT0899 conserved hypothetical protein YP_641633.1 KEGG: mbo:Mb0899c possible conserved exported protein YP_641634.1 KEGG: mpa:MAP0812 putative glutathione S-transferase YP_641635.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: mpa:MAP0810 probable cold shock protein YP_641636.1 PFAM: protein of unknown function DUF307; KEGG: mtc:MT0892.1 hypothetical protein YP_641637.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z YP_641638.1 PFAM: thiamineS; KEGG: mpa:MAP0806c MoaD2 YP_641639.1 PFAM: Transglycosylase-like; KEGG: mtc:MT0890 hypothetical protein YP_641640.1 PFAM: molybdopterin biosynthesis MoaE; KEGG: mpa:MAP0804 molybdopterin cofactor biosynthesis protein E YP_641641.1 PFAM: molybdopterin binding domain; KEGG: mpa:MAP0803 Mog YP_641642.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis YP_641643.1 KEGG: mbo:Mb0886 hypothetical protein YP_641644.1 KEGG: mpa:MAP0800c hypothetical protein YP_641645.1 PFAM: helicase-like type III restriction enzyme, res subunit DEAD/DEAH box helicase-like; KEGG: mpa:MAP0799c hypothetical protein YP_641646.1 TIGRFAM: Ethanolamine permease; PFAM: amino acid permease-associated region; KEGG: nfa:nfa21860 putative ethanolamine permease YP_641647.1 KEGG: ath:At4g13340 leucine-rich repeat family protein / extensin family protein YP_641648.1 KEGG: sco:SCO4689 hypothetical protein YP_641649.1 PFAM: luciferase-like; KEGG: mpa:MAP0795 hypothetical protein YP_641650.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: sco:SCO4419 hypothetical protein YP_641651.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP2400 hypothetical protein YP_641652.1 PFAM: Enoyl-CoA hydratase/isomerase 3-hydroxyacyl-CoA dehydrogenase-like 6-phosphogluconate dehydrogenase, NAD-binding 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mpa:MAP0790 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase YP_641653.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_641654.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mag:amb3305 NADH:flavin oxidoreductase YP_641655.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: sco:SCO0117 short chain dehydrogenase YP_641656.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa44560 putative transcriptional regulator YP_641657.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase aminotransferase, class I and II; KEGG: mpa:MAP0788c N-succinyldiaminopimelate aminotransferase YP_641658.1 PFAM: cyclase/dehydrase; KEGG: mpa:MAP0787 hypothetical protein YP_641659.1 PFAM: cyclase/dehydrase; KEGG: mpa:MAP1639c hypothetical protein YP_641660.1 PFAM: cyclase/dehydrase; KEGG: mbo:Mb0877 hypothetical protein YP_641661.1 PFAM: cyclase/dehydrase; KEGG: mpa:MAP1639c hypothetical protein YP_641662.1 KEGG: sco:SCO7296 hypothetical protein YP_641663.1 PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase dTDP-4-dehydrorhamnose reductase Male sterility-like; KEGG: mpa:MAP2967c hypothetical protein YP_641664.1 PFAM: protein of unknown function UPF0089; KEGG: mpa:MAP0347c hypothetical protein YP_641665.1 PFAM: FAD dependent oxidoreductase; KEGG: mpa:MAP0202 hypothetical protein YP_641666.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0201 hypothetical protein YP_641667.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa21750 putative transcriptional regulator YP_641668.1 PFAM: globin; KEGG: mpa:MAP1253c GlbN YP_641669.1 KEGG: mtc:MT0848 hypothetical protein YP_641670.1 PFAM: regulatory protein, TetR; KEGG: mtc:MT0847 hypothetical protein YP_641671.1 PFAM: fatty acid desaturase, type 2; KEGG: mbo:Mb0847c probable acyl-[acyl-carrier protein] desaturase desa1 (acyl-[ACP] desaturase) (stearoyl-ACP desaturase) (protein DES) YP_641672.1 TIGRFAM: Dihydrouridine synthase TIM-barrel protein nifR3; PFAM: dihydrouridine synthase, DuS; KEGG: mpa:MAP0657c hypothetical protein YP_641673.1 TIGRFAM: cell envelope-related function transcriptional attenuator common domain; PFAM: cell envelope-related transcriptional attenuator; KEGG: mpa:MAP0656c hypothetical protein YP_641674.1 PFAM: PhoU; KEGG: mbo:Mb0844c probable phosphate-transport system transcriptional regulatory protein PhoY2 YP_641675.1 PFAM: transcriptional regulatory protein-like; KEGG: fra:Francci3_4261 two component transcriptional regulator, winged helix family YP_641676.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation YP_641677.1 TIGRFAM: Phosphate transport system permease protein 2; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nfa:nfa6020 putative phosphate transport system permease protein YP_641678.1 TIGRFAM: Phosphate ABC transporter, permease protein PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nfa:nfa6010 putative phosphate transport system permease protein YP_641679.1 TIGRFAM: Periplasmic phosphate binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: nfa:nfa6000 putative phosphate-binding protein YP_641680.1 PFAM: low molecular weight phosphotyrosine protein phosphatase regulatory protein, MarR regulatory protein, ArsR; KEGG: rsp:RSP_4210 transcriptional regulator, ArsR family YP_641681.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: nfa:pnf2270 putative arsenate reductase YP_641682.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: mbo:Mb2676 probable arsenic-transport integral membrane protein ArsC YP_641683.1 PFAM: regulatory protein, ArsR; KEGG: mbo:Mb2675 possible transcriptional regulatory protein (probably arsR-family) YP_641684.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpa:MAP0650 hypothetical protein YP_641685.1 PFAM: transcriptional regulatory protein-like; KEGG: nfa:nfa5980 putative transcriptional regulator YP_641686.1 KEGG: mle:ML2195 probable exported protein YP_641687.1 PFAM: Thioredoxin domain; KEGG: mpa:MAP0647c ThiX YP_641688.1 KEGG: mpa:MAP0646c hypothetical protein YP_641689.1 PFAM: Rhodanese-like; KEGG: nfa:nfa5940 putative thiosulfate sulfurtransferase YP_641690.1 PFAM: protein of unknown function DUF1416; KEGG: mbo:Mb0837c conserved hypothetical protein SseC2 YP_641691.1 PFAM: protein of unknown function DUF732; KEGG: mpa:MAP3418 hypothetical protein YP_641692.1 KEGG: mtc:MT0835 hypothetical protein YP_641693.1 KEGG: mbo:Mb0836c hypothetical protein YP_641695.1 catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate YP_641696.1 PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: mpa:MAP0641c hypothetical protein YP_641697.1 KEGG: mbo:Mb0833c hypothetical protein YP_641698.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_641699.1 PFAM: Cupin 2, conserved barrel; KEGG: nfa:nfa55210 hypothetical protein YP_641700.1 PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase NmrA-like Male sterility-like; KEGG: lxx:Lxx15650 nucleoside-diphosphate-sugar epimerase YP_641701.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway YP_641702.1 KEGG: mbo:Mb0830 hypothetical protein YP_641703.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mtc:MT0618 virulence factor YP_641704.1 PFAM: Abortive infection protein; KEGG: mbo:Mb0827 hypothetical protein YP_641705.1 KEGG: nfa:nfa5740 hypothetical protein YP_641706.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_641707.1 PFAM: sodium/hydrogen exchanger; KEGG: lxx:Lxx01540 Na+/H+ antiporter YP_641708.1 KEGG: mbo:Mb2640 PPE family protein YP_641709.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mbo:Mb0824 hypothetical protein YP_641710.1 catalyzes the removal of amino acids from the N termini of peptides YP_641711.1 PFAM: sodium:dicarboxylate symporter; KEGG: efa:EF0387 sodium/dicarboxylate symporter family protein YP_641712.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_641713.1 With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway YP_641714.1 KEGG: mbo:Mb0810 hypothetical protein YP_641715.1 PFAM: beta-lactamase-like; KEGG: mtc:MT0810 hypothetical protein YP_641716.1 KEGG: mpa:MAP0620 hypothetical protein YP_641717.1 PFAM: glutathione peroxidase; KEGG: nfa:nfa46650 putative glutathione peroxidase YP_641718.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0617 hypothetical protein YP_641719.1 PFAM: peptidase S9, prolyl oligopeptidase active site region peptidase S9A, prolyl oligopeptidase-like beta-propeller; KEGG: mbo:Mb0804 probable protease II PtrB (oligopeptidase B) YP_641720.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_641721.1 KEGG: mbo:Mb0802c possible conserved transmembrane protein YP_641722.1 PFAM: glycosyl transferase, family 2; KEGG: plt:Plut_0982 glucosaminyltransferase YP_641723.1 KEGG: rpb:RPB_4111 hypothetical protein YP_641724.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: noc:Noc_1509 UDP-sulfoquinovose synthase YP_641725.1 PFAM: cytochrome P450; KEGG: mbo:Mb0801 possible cytochrome P450 126 CYP126 YP_641726.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_641727.1 KEGG: mpa:MAP0610c hypothetical protein YP_641728.1 PFAM: amino acid permease-associated region; KEGG: psp:PSPPH_2512 amino acid transporter YP_641729.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0609 hypothetical protein YP_641730.1 PFAM: putative esterase; KEGG: mpa:MAP0608c hypothetical protein YP_641731.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis YP_641732.1 PFAM: cytochrome P450; KEGG: nfa:nfa5180 cytochrome P450 monooxygenase YP_641733.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0932c hypothetical protein YP_641734.1 KEGG: mbo:Mb0319 hypothetical protein YP_641735.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mpa:MAP0605 hypothetical protein YP_641736.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: mpa:MAP0604 3-hydroxyisobutyrate dehydrogenase family protein YP_641737.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0603 putative 3-oxoacyl- [acyl-carrier protein] reductase YP_641738.1 PFAM: aldehyde dehydrogenase; KEGG: mpa:MAP0602 aldehyde dehydrogenase YP_641739.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0601c hypothetical protein YP_641740.1 PFAM: cytochrome P450; KEGG: mpa:MAP0600c putative cytochrome P450 YP_641741.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0599c short chain dehydrogenase YP_641742.1 PFAM: cytochrome P450; KEGG: mpa:MAP0598c P450 heme-thiolate protein YP_641743.1 KEGG: mpa:MAP0597c hypothetical protein YP_641744.1 KEGG: mpa:MAP0596c hypothetical protein YP_641745.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mpa:MAP0595c alcohol dehydrogenase / formaldehyde dehydrogenase (glutathione) YP_641746.1 PFAM: nuclear transport factor 2; KEGG: mbo:Mb0783c hypothetical protein YP_641747.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1475 hypothetical protein YP_641748.1 PFAM: histidine triad (HIT) protein; KEGG: mpa:MAP0593c hypothetical protein YP_641749.1 PFAM: ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: mpa:MAP0592 sensor histidine kinase YP_641750.1 PFAM: response regulator receiver transcriptional regulatory protein-like; KEGG: mpa:MAP0591 two-component response regulator YP_641751.1 KEGG: mbo:Mb0779c hypothetical protein YP_641755.1 KEGG: mpa:MAP1972c hypothetical protein YP_641756.1 KEGG: bur:Bcep18194_A4033 hypothetical protein YP_641757.1 KEGG: sme:SMb20100 putative dehydrogenase protein YP_641758.1 PFAM: alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain; KEGG: rsp:RSP_0937 alpha amylase, catalytic subdomain YP_641759.1 KEGG: fra:Francci3_3693 hypothetical protein YP_641760.1 PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: ape:APE2216 putative carbon monoxide dehydrogenase YP_641761.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: mtc:MT0384.1 hypothetical protein YP_641762.1 PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: rpb:RPB_3113 molybdopterin dehydrogenase, FAD-binding YP_641763.1 PFAM: ferredoxin [2Fe-2S]-binding; KEGG: bbr:BB0391 probable 2Fe-2S ferredoxin YP_641764.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent 6-phosphogluconate dehydrogenase, NAD-binding Ketopantoate reductase ApbA/PanE-like; KEGG: bte:BTH_I3122 2-hydroxy-3-oxopropionate reductase, putative YP_641765.1 KEGG: nar:Saro_3152 hypothetical protein YP_641766.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: mbo:Mb3515c short chain dehydrogenase YP_641767.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_641768.1 KEGG: mbo:Mb3519 hypothetical protein YP_641769.1 PFAM: glycosyl transferase, family 20; KEGG: mpa:MAP0573c alpha,alpha-trehalose-phosphate synthase YP_641770.1 KEGG: mpa:MAP0571 hypothetical protein YP_641771.1 KEGG: mpa:MAP0570 hypothetical protein YP_641772.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mtc:MT3598 virulence factor mce family protein YP_641773.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mpa:MAP0568 possible Mce-family lipoprotein LprN (Mce-family lipoprotein Mce4E) YP_641774.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mpa:MAP0567 hypothetical protein YP_641775.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mbo:Mb3527c Mce-family protein Mce4C YP_641776.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mbo:Mb3528c Mce-family protein Mce4B YP_641777.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mbo:Mb3529c MCE-family protein MCE4A YP_641778.1 PFAM: protein of unknown function DUF140; KEGG: mpa:MAP0563 putative ABC transport system permease protein YP_641779.1 PFAM: protein of unknown function DUF140; KEGG: mbo:Mb3531c conserved hypothetical integral membrane protein YrbE4A YP_641780.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_641781.1 KEGG: mpa:MAP0560 FdxD YP_641782.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP0559c probable acyl-CoA dehydrogenase FadE26 YP_641783.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mbo:Mb3535 probable acyl-CoA dehydrogenase FadE27 YP_641784.1 activates fatty acids by binding to coenzyme A YP_641786.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: sma:SAV1260 putative dioxygenase YP_641787.1 activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence YP_641788.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_641789.1 KEGG: mbo:Mb3546 hypothetical protein YP_641791.1 PFAM: cytochrome P450; KEGG: mpa:MAP0547 putative cytochrome P450 YP_641792.1 KEGG: mbo:Mb3549 hypothetical protein YP_641793.1 PFAM: luciferase-like; KEGG: mbo:Mb3550c possible coenzyme F420-dependent oxidoreductase YP_641794.1 PFAM: protein of unknown function DUF35; KEGG: mpa:MAP0544c hypothetical protein YP_641795.1 KEGG: mbo:Mb3552 lipid-transfer protein YP_641796.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_641797.1 PFAM: luciferase-like; KEGG: nfa:nfa5200 hypothetical protein YP_641798.1 KEGG: mpa:MAP3519 hypothetical protein YP_641799.1 PFAM: MOSC; KEGG: eba:p2A329 hypothetical protein YP_641800.1 PFAM: Rieske [2Fe-2S] region; KEGG: mbo:Mb3556 possible oxidoreductase YP_641801.1 KEGG: mpa:MAP0538c hypothetical protein YP_641802.1 PFAM: polysaccharide deacetylase; KEGG: sco:SCO5053 secreted protein YP_641803.1 PFAM: glycosyl transferase, family 2 chitin synthase; KEGG: sco:SCO5051 glycosyltransferase YP_641804.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: sco:SCO5050 nucleotide-sugar dehydrogenase YP_641805.1 KEGG: mpa:MAP0537 hypothetical protein YP_641806.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mbo:Mb3560c short chain dehydrogenase YP_641807.1 KEGG: mpa:MAP0535 hypothetical protein YP_641808.1 SMART: regulatory proteins, IclR; KEGG: nfa:nfa24560 hypothetical protein YP_641809.1 activates fatty acids by binding to coenzyme A YP_641810.1 PFAM: aldehyde dehydrogenase; KEGG: gka:GK0199 aldehyde dehydrogenase YP_641811.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mbo:Mb3113 probable zinc-type alcohol dehydrogenase AdhD (aldehyde reductase) YP_641812.1 PFAM: cytochrome P450; KEGG: mpa:MAP2261c hypothetical protein YP_641813.1 PFAM: ATP-binding region, ATPase-like histidine kinase A-like; KEGG: xcv:XCV3610 two-component system sensor protein YP_641814.1 PFAM: regulatory protein, LuxR response regulator receiver; KEGG: sth:STH3096 two-component response regulator YP_641815.1 KEGG: mpa:MAP0597c hypothetical protein YP_641817.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase-like DEAD/DEAH box helicase-like; KEGG: nfa:nfa13680 putative helicase YP_641818.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III related proteins; KEGG: mpa:MAP2704 hypothetical protein YP_641819.1 catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate YP_641820.1 catalyzes the formation of acetyl-CoA from acetalaldehyde YP_641821.1 PFAM: Hydratase/decarboxylase; KEGG: mpa:MAP0531 2-keto-4-pentenoate hydratase YP_641822.2 initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione YP_641823.1 PFAM: MaoC-like dehydratase; KEGG: mpa:MAP0529c UfaA2 YP_641824.1 KEGG: mlo:mlr3986 hypothetical protein YP_641825.1 PFAM: cytoplasmic peptidoglycan synthetases-like Mur ligase, middle region; KEGG: rpa:RPA3534 putative UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate- D-alanyl-D-alanine ligase YP_641826.1 PFAM: Integrase, catalytic region; KEGG: cdi:DIP0764 putative transposase YP_641828.1 KEGG: lmo:lmo1798 hypothetical protein YP_641829.1 KEGG: ehi:298.t00011 hypothetical protein PROSITE: ASP_RICH YP_641830.1 KEGG: tcr:508261.130 mucin-associated surface protein (MASP) PROSITE: PTS_HPR_SER GLY_RICH YP_641831.1 KEGG: mtc:MT3987 PPE family protein YP_641832.1 KEGG: mbo:Mb3570c lipid-transfer protein YP_641833.1 PFAM: MaoC-like dehydratase; KEGG: mpa:MAP0526 hypothetical protein YP_641834.1 PFAM: protein of unknown function DUF35; KEGG: mpa:MAP0525 hypothetical protein YP_641835.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP0524 Acyl-CoA dehydrogenase YP_641836.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mbo:Mb3574c probable acyl-CoA dehydrogenase FadE28 YP_641837.1 PFAM: cytochrome P450; KEGG: mpa:MAP0522 P450 heme-thiolate protein YP_641838.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_641839.1 KEGG: mpa:MAP0520c hypothetical protein YP_641840.1 PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mbo:Mb3577 hypothetical protein YP_641841.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0518 short chain dehydrogenase YP_641842.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0517 short chain dehydrogenase YP_641843.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_641844.1 PFAM: coenzyme A transferase; KEGG: mpa:MAP0515c putative glutaconate CoA-transferase, subunit A YP_641845.1 KEGG: mpa:MAP0514c putative CoA transferase beta subunit YP_641846.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mpa:MAP0513c hypothetical protein YP_641847.1 KEGG: mpa:MAP0512c hypothetical protein YP_641848.1 KEGG: mpa:MAP0511c hypothetical protein YP_641849.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: nfa:nfa20970 putative dehydrogenase YP_641850.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_641851.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0509 hypothetical protein YP_641852.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mtc:MT3664 3-oxoacyl-[acyl-carrier protein] reductase YP_641853.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP0507 acyl-CoA dehydrogenase YP_641854.1 activates fatty acids by binding to coenzyme A YP_641855.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mbo:Mb3592 probable acyl-CoA dehydrogenase FadE31 YP_641856.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP0504c acyl-CoA dehydrogenase YP_641857.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP0503c acyl-CoA dehydrogenase YP_641858.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_641859.1 KEGG: mbo:Mb1413c hypothetical protein YP_641860.1 AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase YP_641861.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa28660 putative short chain dehydrogenase YP_641862.1 PFAM: General substrate transporter major facilitator superfamily MFS_1; KEGG: nfa:nfa28670 putative transporter YP_641863.1 PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: nfa:nfa28680 putative transcriptional regulator YP_641864.1 PFAM: CsbD-like; KEGG: lxx:Lxx02180 hypothetical protein YP_641865.1 KEGG: sil:SPO0356 hypothetical protein YP_641866.1 PFAM: flavin reductase-like, FMN-binding; KEGG: mbo:Mb3598c possible oxidoreductase YP_641867.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpa:MAP0499 biphenyl-2,3-diol 1,2-dioxygenase YP_641868.1 PFAM: alpha/beta hydrolase fold; KEGG: mbo:Mb3600c 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase BphD YP_641869.1 PFAM: Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP0497 hypothetical protein YP_641870.1 PFAM: ferredoxin oxidoreductase FAD/NAD(P)-binding Oxidoreductase FAD-binding region; KEGG: mpa:MAP0496c hypothetical protein YP_641871.1 KEGG: mbo:Mb3603 hypothetical protein YP_641872.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP0492 FadE34 YP_641873.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP0491c hypothetical protein YP_641874.1 TIGRFAM: HAD-superfamily hydrolase subfamily IIB; PFAM: trehalose-phosphatase; KEGG: nfa:nfa4460 putative trehalose-6-phosphate phophatase YP_641875.1 KEGG: sco:SCO3360 hypothetical protein YP_641876.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein, LacI; KEGG: mbo:Mb3606c transcriptional regulatory protein (probably LacI-family) YP_641877.1 PFAM: ABC-3; KEGG: mpa:MAP3774c putative ABC-transporter transmembrane protein YP_641878.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: mpa:MAP3775c putative zinc / manganese transport system ATP-binding protein YP_641879.1 PFAM: periplasmic solute binding protein; KEGG: mpa:MAP3776c putative zinc / manganese transport system substrate-binding protein YP_641880.1 PFAM: Rhodanese-like; KEGG: mpa:MAP2046 thiosulfate sulfurtransferase YP_641881.1 TIGRFAM: Cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: mpa:MAP3792c cob(II)yrinic acid a,c-diamide reductase YP_641882.1 KEGG: nfa:nfa23280 hypothetical protein YP_641883.1 PFAM: periplasmic solute binding protein; KEGG: nfa:nfa23270 putative transporter YP_641884.1 KEGG: nfa:nfa23260 putative ABC transporter YP_641885.1 PFAM: ABC-3; KEGG: nfa:nfa23260 putative ABC transporter YP_641886.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: sco:SCO0476 ABC transport protein, ATP-binding subunit YP_641887.1 PFAM: LamB/YcsF; KEGG: mpa:MAP0486c hypothetical protein YP_641888.1 SMART: regulatory protein, ArsR; KEGG: nfa:nfa38840 putative transcriptional regulator YP_641889.1 PFAM: General substrate transporter major facilitator superfamily MFS_1; KEGG: nfa:nfa38830 putative transporter YP_641890.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif YP_641891.1 required for 70S ribosome assembly YP_641892.1 PFAM: cobalamin synthesis CobW-like; KEGG: mbo:Mb0109 hypothetical protein YP_641893.1 KEGG: mpa:MAP0485c hypothetical protein YP_641894.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: mpa:MAP0480 glycerophosphoryl diester phosphodiesterase YP_641895.1 PFAM: Arsenical pump membrane protein Citrate transporter; KEGG: mtc:MT3684 conserved hypothetical protein YP_641896.1 TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU) RNA 2-O ribose methyltransferase, substrate binding; KEGG: mpa:MAP0479 tRNA/rRNA methyltransferase YP_641897.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_641898.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate YP_641899.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers YP_641900.1 PFAM: transcription factor CarD; KEGG: mpa:MAP0475 CarD family transcriptional regulator YP_641901.1 KEGG: mtc:MT3690 hypothetical protein YP_641902.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_641903.1 non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair YP_641904.1 KEGG: mpa:MAP0471 hypothetical protein YP_641905.1 PFAM: carbonic anhydrase; KEGG: mtc:MT3694 carbonic anhydrase YP_641906.1 PFAM: helix-hairpin-helix motif HhH-GPD; KEGG: mpa:MAP0469c A/G-specific adenine glycosylase YP_641907.1 TIGRFAM: GGDEF domain; PFAM: GGDEF EAL GAF; KEGG: mle:ML1750 hypothetical protein YP_641908.1 PFAM: helix-turn-helix, AraC type ThiJ/PfpI; KEGG: nfa:nfa17020 putative transcriptional regulator YP_641910.1 PFAM: alpha/beta hydrolase fold; KEGG: mbo:Mb3622c putative hydrolase YP_641911.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mpa:MAP0467c hypothetical protein YP_641912.1 KEGG: mtu:Rv3593 probable conserved lipoprotein LpqF YP_641913.1 PFAM: Phosphoglycerate mutase; KEGG: mpa:MAP0464 hypothetical protein YP_641914.1 KEGG: mpa:MAP0463 hypothetical protein YP_641915.1 KEGG: mpa:MAP0462 hypothetical protein YP_641916.1 PFAM: UvrB/UvrC protein AAA ATPase, central region Clp, N terminal ATPase associated with various cellular activities, AAA_5 ATPase AAA-2; SMART: ATPase; KEGG: mpa:MAP0461 probable ATP-dependent Clp protease ATP-binding subunit YP_641917.1 KEGG: mpa:MAP0460 Lsr2 YP_641918.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 YP_641919.1 KEGG: nfa:nfa19290 hypothetical protein YP_641920.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP YP_641921.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5) YP_641922.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_641923.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase-like; KEGG: mbo:Mb3633c conserved hypothetical alanine and leucine rich protein YP_641924.1 KEGG: mpa:MAP0454 hypothetical protein YP_641925.1 KEGG: mbo:Mb3635c probable conserved secreted protein YP_641926.1 KEGG: mpa:MAP0452 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK YP_641927.1 TIGRFAM: dihydroneopterin aldolase; KEGG: mpa:MAP0451 dihydroneopterin aldolase YP_641928.1 KEGG: mpa:MAP0450 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS YP_641929.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer YP_641930.1 KEGG: mpa:MAP0448 cell division protein; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41 AAA ATPase, central region peptidase M41, FtsH extracellular ATPase associated with various cellular activities, AAA_5; SMART: ATPase YP_641931.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP0446c EphA YP_641932.1 PFAM: luciferase-like; KEGG: mpa:MAP0445c hypothetical protein YP_641933.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mpa:MAP0444c hypothetical protein YP_641934.1 PFAM: protein of unknown function DUF541; KEGG: mpa:MAP0440c LpqG YP_641935.1 KEGG: mbo:Mb3648c hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_641936.1 TIGRFAM: tRNA(Ile)-lysidine synthetase-like; PFAM: PP-loop; KEGG: mpa:MAP0438 cell cycle protein MesJ YP_641937.1 KEGG: mpa:MAP0437 hypothetical protein YP_641938.1 TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C; KEGG: mtu:Rv3627c probable penicillin binding protein (D-alanyl-D-alanine carboxypeptidase) YP_641939.1 PFAM: Inorganic pyrophosphatase; KEGG: mpa:MAP0435c inorganic pyrophosphatase YP_641940.1 KEGG: nfa:nfa52440 hypothetical protein YP_641941.1 catalyzes the formation of S-ureidoglycolate and urea from allantoate YP_641942.1 PFAM: metallophosphoesterase; KEGG: sma:SAV3411 hypothetical protein YP_641943.1 PFAM: aldehyde dehydrogenase; KEGG: xcc:XCC3244 ketoglutarate semialdehyde dehydrogenase YP_641945.1 PFAM: Integral membrane protein TerC; KEGG: nfa:nfa38610 putative transporter membrane protein YP_641946.1 TIGRFAM: Amino acid adenylation Non-ribosomal peptide synthetase-like; PFAM: AMP-dependent synthetase and ligase transferase hexapeptide repeat phosphopantetheine-binding; KEGG: nfa:nfa3790 putative non-ribosomal peptide synthetase YP_641947.1 PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: nfa:nfa3780 putative peptidase YP_641948.1 KEGG: mbo:Mb3654 probable conserved integral membrane protein YP_641949.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase dTDP-4-dehydrorhamnose reductase Male sterility-like; KEGG: lxx:Lxx05210 UDP-glucose 4-epimerase YP_641950.1 KEGG: mpa:MAP0429c hypothetical protein YP_641951.1 KEGG: mpa:MAP3836c hypothetical protein YP_641952.1 KEGG: mpa:MAP3835c hypothetical protein YP_641953.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: cps:CPS_1326 4-carboxymuconolactone decarboxylase YP_641954.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA YP_641955.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase histidine kinase, HAMP region; KEGG: mpa:MAP0426c hypothetical protein YP_641956.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity YP_641957.1 KEGG: mpa:MAP0424 hypothetical protein YP_641958.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: mle:ML0198 putative cold shock protein YP_641959.1 PFAM: helicase-like DEAD/DEAH box helicase-like; KEGG: mpa:MAP0422c hypothetical protein YP_641960.1 KEGG: mpa:MAP0421c hypothetical protein YP_641961.1 KEGG: mtc:MT3756.1 hypothetical protein YP_641962.1 KEGG: mpa:MAP0419 hypothetical protein YP_641963.1 PFAM: type II secretion system protein; KEGG: mpa:MAP0418 hypothetical protein YP_641964.1 PFAM: type II secretion system protein; KEGG: mbo:Mb3682c probable conserved transmembrane protein YP_641965.1 PFAM: type II secretion system protein E; KEGG: mbo:Mb3683c pilus assembly protein CpaF YP_641966.1 KEGG: mpa:MAP0415 hypothetical protein YP_641967.1 TIGRFAM: HAD-superfamily hydrolase subfamily IB, PSPase-like HAD-superfamily subfamily IB, PSPase-like; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: mpa:MAP0414c hypothetical protein YP_641968.1 KEGG: mpa:MAP0413 hypothetical protein YP_641969.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_641970.1 KEGG: mbo:Mb3692c putative protease YP_641971.1 PFAM: protein of unknown function DUF1469; KEGG: mpa:MAP0405c hypothetical protein YP_641972.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP0404c putative hydrolase YP_641973.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap Colicin V production protein; KEGG: mpa:MAP0403 putative membrane-associated serine protease YP_641974.1 PFAM: NUDIX hydrolase; KEGG: mpa:MAP0402 hypothetical protein YP_641975.1 PFAM: Redoxin; KEGG: mpa:MAP0401 hypothetical protein YP_641976.1 KEGG: mtc:MT3775 ultraviolet N-glycosylase/AP lyase; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif HhH-GPD; SMART: Iron-sulfur cluster loop YP_641977.1 KEGG: mbo:Mb3699 possible membrane protein YP_641978.1 PFAM: cyclic nucleotide-binding regulatory protein, Crp; KEGG: mpa:MAP0398c hypothetical protein YP_641979.1 PFAM: beta-lactamase-like; KEGG: mpa:MAP0397 hypothetical protein YP_641980.1 PFAM: Endoribonuclease L-PSP; KEGG: mpa:MAP0396 hypothetical protein YP_641981.1 KEGG: mbo:Mb3703c hypothetical protein YP_641982.1 PFAM: Anion-transporting ATPase; KEGG: mpa:MAP0395c probable anion transporter ATPase YP_641983.1 PFAM: Anion-transporting ATPase; KEGG: mpa:MAP0394c probable anion transporter ATPase YP_641984.1 PFAM: transcription factor WhiB; KEGG: nfa:nfa3400 putative transcriptional regulator YP_641985.1 PFAM: glycosyl transferase, family 51 penicillin-binding protein, transpeptidase PASTA; KEGG: mbo:Mb3707 probable bifunctional membrane-associated penicillin-binding protein 1A/1B PonA2 (murein polymerase) [includes: penicillin-insensitive transglycosylase (peptidoglycan tgase) + penicillin-sensitive transpeptidase (dd-transpeptidase)] YP_641986.1 PFAM: metallophosphoesterase; KEGG: mbo:Mb3708 hypothetical protein YP_641987.1 PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: mtc:MT3786 cysteine synthase/cystathionine beta-synthase family protein YP_641988.1 PFAM: phage integrase; KEGG: lxx:Lxx08850 phage-related integrase YP_641989.1 KEGG: mbo:Mb1080c hypothetical protein YP_641990.1 KEGG: fra:Francci3_1199 putative ATP-binding protein YP_641992.1 KEGG: lma:LmjF35.0540 proteophosphoglycan 5 YP_641997.1 PFAM: regulatory protein, TetR; KEGG: nfa:pnf2320 putative transcriptional regulator YP_641998.1 PFAM: thioesterase superfamily; KEGG: nfa:pnf2350 hypothetical protein YP_641999.1 PFAM: regulatory protein, TetR; KEGG: mtc:MT3679 transcriptional regulator, TetR family YP_642000.1 KEGG: mtc:MT3229 hypothetical protein YP_642001.1 PFAM: MMPL; KEGG: mbo:Mb1215 probable conserved transmembrane transport protein MmpL10 YP_642002.1 KEGG: mac:MA2602 hypothetical protein YP_642004.1 PFAM: protein kinase; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: hch:HCH_04242 serine/threonine protein kinase YP_642006.1 PFAM: transposase, mutator type; KEGG: mbo:Mb3142 probable transposase YP_642007.1 PFAM: cytochrome P450; KEGG: nfa:nfa11380 cytochrome P450 monooxygenase YP_642008.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa19680 putative transcriptional regulator YP_642009.1 KEGG: nfa:nfa19680 putative transcriptional regulator YP_642010.1 PFAM: acyl-CoA thioesterase; KEGG: sco:SCO1153 acyl-CoA thioesterase II YP_642011.1 KEGG: nfa:nfa48530 hypothetical protein YP_642012.1 TIGRFAM: Putative methylase; PFAM: putative RNA methylase methyltransferase small; KEGG: mpa:MAP0373 hypothetical protein YP_642013.1 KEGG: mpa:MAP3066c hypothetical protein YP_642015.1 PFAM: luciferase-like; KEGG: mpa:MAP0371 hypothetical protein YP_642016.1 PFAM: GatB/Yqey; KEGG: mpa:MAP0363 hypothetical protein YP_642017.1 KEGG: mbo:Mb3714 probable conserved transmembrane protein YP_642018.1 KEGG: mtc:MT3792 hypothetical protein YP_642019.1 KEGG: mtc:MT3793 hypothetical protein YP_642020.1 PFAM: ATPase associated with various cellular activities, AAA_3 ATPase associated with various cellular activities, AAA_5; KEGG: mpa:MAP0359c MoxR2 YP_642021.1 PFAM: protein of unknown function DUF58; KEGG: mtc:MT3795 hypothetical protein YP_642022.1 KEGG: mpa:MAP0357 hypothetical protein YP_642023.1 PFAM: RDD; KEGG: mbo:Mb3720 possible conserved membrane protein YP_642024.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_642025.1 TIGRFAM: Pyruvate:ferredoxin (flavodoxin) oxidoreductase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding pyruvate ferredoxin/flavodoxin oxidoreductase pyruvate flavodoxin/ferredoxin oxidoreductase-like; KEGG: mca:MCA0769 pyruvate ferredoxin/flavodoxin oxidoreductase family protein YP_642026.2 unknown function YP_642027.1 PFAM: Carotenoid oxygenase; KEGG: mpa:MAP0465 hypothetical protein YP_642028.1 PFAM: regulatory protein GntR, HTH GntR-like; KEGG: nfa:nfa33840 putative transcriptional regulator YP_642029.1 PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: bur:Bcep18194_A5280 permease for cytosine/purines, uracil, thiamine, allantoin transporter YP_642030.1 PFAM: transcriptional regulator PadR-like; KEGG: nfa:nfa12910 putative transcriptional regulator YP_642031.1 PFAM: transcriptional regulator PadR-like; KEGG: mpa:MAP0354c hypothetical protein YP_642032.1 PFAM: aldo/keto reductase; KEGG: mlo:mlr2172 probable oxidoreductase YP_642033.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP YP_642034.1 PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: mtc:MT2030 hypothetical protein YP_642035.1 PFAM: General substrate transporter major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2004 major facilitator superfamily (MFS_1) transporter YP_642036.1 KEGG: mtc:MT3801 hypothetical protein YP_642037.1 PFAM: thiopurine S-methyltransferase Methyltransferase type 11 Methyltransferase type 12; KEGG: mpa:MAP0301 hypothetical protein YP_642038.1 PFAM: aminotransferase, class V aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mbo:Mb3726c hypothetical protein YP_642039.1 KEGG: mpa:MAP0303c hypothetical protein YP_642040.1 KEGG: mbo:Mb3728c hypothetical protein YP_642041.1 PFAM: protein of unknown function DUF323; KEGG: mpa:MAP0305c hypothetical protein YP_642042.1 PFAM: glutamate--cysteine ligase, GCS2; KEGG: mpa:MAP0306c GshA YP_642043.1 KEGG: mpa:MAP0307c hypothetical protein YP_642044.1 PFAM: OsmC-like protein; KEGG: bja:bll0735 organic hydroperoxide resistance protein YP_642045.1 KEGG: nfa:nfa3250 putative ferric uptake regulator YP_642046.1 KEGG: mpa:MAP0308c hypothetical protein YP_642047.1 KEGG: mbo:Mb3734c hypothetical protein YP_642048.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde YP_642049.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation. YP_642050.1 PFAM: nitroreductase; KEGG: mca:MCA2267 nitroreductase family protein, putative YP_642051.1 TIGRFAM: ammonium transporter; PFAM: Rh-like protein/ammonium transporter; KEGG: nfa:nfa21100 putative ammonium transporter YP_642052.1 PFAM: glutamine synthetase, catalytic region; KEGG: nfa:nfa21040 putative glutamine synthetase YP_642053.1 PFAM: glutamine amidotransferase, class-II; KEGG: nfa:nfa21030 putative glutamine amidotransferase YP_642054.1 KEGG: nfa:nfa21020 hypothetical protein YP_642055.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase ferredoxin-dependent glutamate synthase; KEGG: nfa:nfa21010 putative glutamate synthase YP_642056.1 PFAM: FAD dependent oxidoreductase; KEGG: nfa:nfa21050 putative oxidoreductase YP_642057.1 PFAM: helix-turn-helix motif Cupin 2, conserved barrel; KEGG: nfa:nfa21110 putative DNA-binding protein YP_642058.1 KEGG: mpa:MAP0312 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase LeuA allosteric (dimerisation) domain YP_642059.1 PFAM: NADPH-dependent FMN reductase; KEGG: nfa:nfa54320 hypothetical protein YP_642060.1 3'-5' exonuclease of DNA polymerase III YP_642061.1 PFAM: Mur ligase, middle region Domain of unknown function DUF1727; KEGG: mtc:MT3815 mur ligase family protein YP_642062.1 PFAM: CobB/CobQ-like glutamine amidotransferase; KEGG: mbo:Mb3740 possible cobyric acid synthase CobQ2 YP_642063.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_642064.1 PFAM: conserved hypothetical protein 103; KEGG: mpa:MAP0317c hypothetical protein YP_642065.1 PFAM: cell wall hydrolase/autolysin; KEGG: mpa:MAP0318 hypothetical protein YP_642066.1 KEGG: mpa:MAP0319c hypothetical protein YP_642067.1 PFAM: FAD linked oxidase-like; KEGG: mbo:Mb3746 hypothetical protein YP_642068.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase Methyltransferase type 11 Methyltransferase type 12; KEGG: mtc:MT3823 cyclopropane-fatty-acyl-phospholipid synthase YP_642069.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA YP_642070.1 PFAM: aminotransferase, class I and II; KEGG: mpa:MAP0323c hypothetical protein YP_642071.1 KEGG: mpa:MAP0324 hypothetical protein YP_642072.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap PDZ/DHR/GLGF; KEGG: mbo:Mb0130 probable serine protease PepA YP_642073.1 PFAM: regulatory protein, TetR Tetracyclin repressor-like; KEGG: sco:SCO0250 transcriptional regulator YP_642074.1 PFAM: dihydrodipicolinate reductase; KEGG: mpa:MAP0332 hypothetical protein YP_642075.1 KEGG: mpa:MAP0340c hypothetical protein YP_642076.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth YP_642077.1 PFAM: HNH endonuclease protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mtu:Rv3776 hypothetical protein YP_642078.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP2527c hypothetical protein YP_642079.1 KEGG: mpa:MAP2531 hypothetical protein YP_642080.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sma:SAV1367 putative dehydrogenase YP_642081.1 KEGG: sco:SCO7126 hypothetical protein YP_642082.1 PFAM: sigma-70 region 2 sigma-70 region 4 Sigma-70, region 4 type 2; KEGG: mpa:MAP3324c RNA polymerase sigma-70 factor, ECF subfamily YP_642083.1 PFAM: regulatory protein, LuxR; KEGG: sco:SCO7143 transcriptional regulator YP_642084.1 PFAM: nitroreductase; KEGG: ret:RHE_PF00227 probable nitroreductase protein YP_642085.1 PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase NmrA-like; KEGG: sco:SCO7108 hypothetical protein YP_642086.1 PFAM: transposase, IS111A/IS1328/IS1533 transposase IS116/IS110/IS902; KEGG: mpa:MAP3748c IS1110 transposase YP_642087.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: sco:SCO0511 dehydrogenase (secreted protein) YP_642088.1 PFAM: beta-lactamase-like; KEGG: sco:SCO0130 beta-lactamase YP_642089.1 PFAM: cytochrome P450; KEGG: mpa:MAP0336c hypothetical protein YP_642090.1 KEGG: fra:Francci3_1886 luciferase-like YP_642091.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpa:MAP2029c hypothetical protein YP_642092.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP2530 hypothetical protein YP_642093.1 PFAM: nitroreductase; KEGG: mpa:MAP0746 hypothetical protein YP_642094.1 PFAM: luciferase-like; KEGG: mpa:MAP2524c hypothetical protein YP_642095.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B1508 short-chain dehydrogenase/reductase SDR YP_642096.1 PFAM: cytochrome P450; KEGG: mpa:MAP2525c hypothetical protein YP_642097.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP2526c hypothetical protein YP_642098.1 PFAM: glucose-methanol-choline oxidoreductase GMC oxidoreductase; KEGG: sil:SPOA0386 oxidoreductase, GMC family YP_642099.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth YP_642100.1 PFAM: fatty acid desaturase, type 2; KEGG: mpa:MAP0658c acyl-[ACP] desaturase YP_642101.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu YP_642102.1 TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component extracellular solute-binding protein, family 3; KEGG: cpe:CPE2093 probable amino acid ABC transporter YP_642103.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: bld:BLi00418 similar to glutamine ABC transporter (ATP-binding protein); RBL01710 YP_642104.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa9730 putative transcriptional regulator YP_642105.1 PFAM: amine oxidase FAD dependent oxidoreductase; KEGG: fra:Francci3_0821 amine oxidase YP_642106.1 PFAM: Saccharopine dehydrogenase; KEGG: sco:SCO7644 ATP binding protein YP_642107.1 PFAM: cytochrome P450; KEGG: mpa:MAP0344c putative cytochrome p450 YP_642108.1 KEGG: nfa:nfa2650 putative tRNA-guanine transglycosylase; TIGRFAM: tRNA-guanine transglycosylases, various specificities queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_642109.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP0345c haloalkane dehalogenase, putative YP_642110.1 PFAM: Mycobacterium 19 kDa lipoprotein antigen; KEGG: mpa:MAP0261c hypothetical protein YP_642111.1 PFAM: PE-PPE-like; KEGG: mbo:Mb1828 PPE family protein YP_642112.1 KEGG: ssn:SSO_2063 putative propanediol utilization protein: diol dehydratase reactivation YP_642113.1 KEGG: sec:SC2050 propanediol utilization: dehydratase, small subunit YP_642114.1 PFAM: dehydratase, large subunit; KEGG: mlo:mll6722 glycerol dehydratase large subunit YP_642115.1 PFAM: penicillin-binding protein, transpeptidase NTF2-like N-terminal transpeptidase; KEGG: nfa:nfa18430 putative penicillin-binding protein YP_642116.1 KEGG: mle:ML2023 putative secreted protein YP_642117.1 KEGG: nfa:nfa41660 hypothetical protein YP_642119.1 KEGG: mlo:mll1515 hypothetical protein YP_642120.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: mbo:Mb3778c possible cytidine/deoxycytidylate deaminase YP_642121.1 KEGG: mpa:MAP0278 hypothetical protein YP_642122.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate YP_642123.1 PFAM: protein of unknown function DUF1089; KEGG: mbo:Mb3781c hypothetical protein YP_642124.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpa:MAP0275 putative glycine betaine/proline/choline transport system permease protein YP_642125.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mbo:Mb3783c possible osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProW YP_642126.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: mbo:Mb3784c possible osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport ATP-binding protein ABC transporter ProV YP_642127.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: mtc:MT3866 amino acid ABC transporter, amino acid-binding protein, putative YP_642128.1 KEGG: mtc:MT3867 hypothetical protein YP_642129.1 PFAM: aminoglycoside phosphotransferase; KEGG: mbo:Mb3787c possible acyl-CoA dehydrogenase FadE36 YP_642130.1 PFAM: Phosphoglycerate mutase; KEGG: mpa:MAP0269 hypothetical protein YP_642131.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0266c hypothetical protein YP_642132.1 PFAM: beta-lactamase-like; KEGG: mpa:MAP0262 hypothetical protein YP_642133.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: bat:BAS1707 dehydrogenase, putative YP_642134.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: nfa:nfa38060 putative dehydrogenase YP_642135.1 PFAM: helix-turn-helix, HxlR type; KEGG: fra:Francci3_3293 putative transcriptional regulator YP_642136.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_642137.1 KEGG: mpa:MAP1067c hypothetical protein YP_642138.1 TIGRFAM: Protein of unknown function UPF0025; PFAM: metallophosphoesterase; KEGG: mpa:MAP3534c hypothetical protein YP_642139.1 KEGG: bja:blr1157 hypothetical protein YP_642140.1 PFAM: cutinase; KEGG: mbo:Mb3751 probable cutinase precursor CUT5 YP_642141.1 PFAM: UspA; KEGG: mbo:Mb2051c hypothetical protein YP_642142.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase, class I and II; KEGG: mbo:Mb3800 putative aminotransferase YP_642143.1 KEGG: mpa:MAP0251c hypothetical protein YP_642144.1 KEGG: mpa:MAP0250 hypothetical protein YP_642146.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_642147.1 PFAM: regulatory protein, MarR; KEGG: nfa:nfa2240 putative transcriptional regulator YP_642148.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mpa:MAP0245c hypothetical protein YP_642149.1 TIGRFAM: Cysteine desulphurase related; PFAM: aminotransferase, class V; KEGG: mpa:MAP0244 possible aminotransferase YP_642150.1 KEGG: mpa:MAP0242c hypothetical protein YP_642151.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: mpa:MAP0241c putative ABC transporter ATP-binding component YP_642152.1 PFAM: glycosyl transferase, family 2; KEGG: mpa:MAP0240c RfbE YP_642153.1 PFAM: ABC-2 type transporter; KEGG: mpa:MAP0239c putative ABC transporter component YP_642154.1 KEGG: mbo:Mb3842 PE-PGRS family protein YP_642155.1 KEGG: sco:SCO1548 hypothetical protein YP_642156.1 KEGG: sma:SAV6801 hypothetical protein YP_642157.1 TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; KEGG: sco:SCO4835 hypothetical protein YP_642158.1 PFAM: regulatory protein GntR, HTH aminotransferase, class I and II; KEGG: sma:SAV6256 putative GntR-family transcriptional regulator YP_642159.1 PFAM: GtrA-like protein; KEGG: nfa:nfa1980 hypothetical protein YP_642160.1 PFAM: FAD linked oxidase-like; KEGG: mbo:Mb3819 putative oxidoreductase YP_642161.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0234c oxidoreductase, short-chain dehydrogenase/reductase family YP_642162.1 KEGG: mbo:Mb3821 probable conserved transmembrane protein YP_642163.1 PFAM: cell wall arabinan synthesis protein; KEGG: mbo:Mb3822 integral membrane indolylacetylinositol arabinosyltransferase EmbC (arabinosylindolylacetylinositol synthase) YP_642164.1 PFAM: cell wall arabinan synthesis protein; KEGG: mpa:MAP0229c arabinosyl transferase YP_642165.1 PFAM: cell wall arabinan synthesis protein; KEGG: mpa:MAP0228c arabinosyl transferase YP_642166.1 PFAM: HNH endonuclease protein of unknown function DUF222; SMART: HNH nuclease; KEGG: mbo:Mb1794c hypothetical protein YP_642167.1 PFAM: protein kinase; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: mtc:MT1788 serine/threonine protein kinase YP_642168.1 KEGG: mpa:MAP3054c LigA YP_642169.1 PFAM: carboxyl transferase; KEGG: mbo:Mb3829c probable propionyl-CoA carboxylase beta chain 4 AccD4 (PCCase) (propanoyl-CoA:carbon dioxide ligase) YP_642170.1 PFAM: beta-ketoacyl synthase Thioesterase acyl transferase region phosphopantetheine-binding; KEGG: mpa:MAP0220 Pks13 YP_642171.1 activates fatty acids by binding to coenzyme A YP_642172.1 PFAM: cutinase; KEGG: mbo:Mb3832c hypothetical protein YP_642174.1 PFAM: putative esterase; KEGG: mpa:MAP0217 FbpC1 YP_642175.1 PFAM: putative esterase; KEGG: mbo:Mb3834c secreted antigen 85-A FbpA (mycolyl transferase 85A) (fibronectin-binding protein A) (antigen 85 complex A) YP_642176.1 KEGG: mtc:MT3912 hypothetical protein YP_642177.1 catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate YP_642178.1 PFAM: phosphoesterase, PA-phosphatase related; KEGG: mpa:MAP0213 hypothetical protein YP_642179.1 KEGG: mbo:Mb3838c galactofuranosyl transferase YP_642180.1 PFAM: UDP-galactopyranose mutase; KEGG: mpa:MAP0211 UDP-galactopyranose mutase YP_642181.1 KEGG: mbo:Mb3840 exported repetitive protein precursor PirG (cell surface protein) (EXP53) YP_642182.1 PFAM: N-acetylmuramoyl-L-alanine amidase, family 2 LGFP; SMART: Animal peptidoglycan recognition protein PGRP; KEGG: mpa:MAP0209c Csp YP_642183.1 TIGRFAM: Cof protein HAD-superfamily hydrolase subfamily IIB; PFAM: Haloacid dehalogenase-like hydrolase sucrose-6F-phosphate phosphohydrolase Haloacid dehalogenase-like hydrolase, type 3; KEGG: mpa:MAP0208 hypothetical protein YP_642184.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mbo:Mb3845c putative acyltransferase YP_642185.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mbo:Mb3846c putative acyltransferase YP_642186.1 PFAM: Rieske [2Fe-2S] region; KEGG: mbo:Mb3848 hypothetical protein YP_642187.1 KEGG: mpa:MAP0203c hypothetical protein YP_642188.1 KEGG: ppr:PBPRB0876 hypothetical protein YP_642189.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_642190.1 KEGG: mpa:MAP0196c hypothetical protein YP_642191.1 PFAM: protein of unknown function DUF1025; KEGG: mpa:MAP0195c hypothetical protein YP_642192.1 KEGG: nfa:nfa3000 hypothetical protein YP_642193.1 PFAM: Phosphoglycerate mutase; KEGG: mpa:MAP0194 putative phosphoglycerate mutase YP_642194.1 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis YP_642195.1 KEGG: mbo:Mb3869 hypothetical protein YP_642196.1 PFAM: Abortive infection protein; KEGG: nfa:nfa1300 hypothetical protein YP_642198.1 TIGRFAM: cell envelope-related function transcriptional attenuator common domain; PFAM: cell envelope-related transcriptional attenuator; KEGG: mpa:MAP0191c hypothetical protein YP_642199.1 PFAM: Ferritin and Dps; KEGG: mbo:Mb3871 possible bacterioferritin BfrB YP_642200.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: mbo:Mb3872c probable glycerophosphoryl diester phosphodiesterase GlpQ1 (glycerophosphodiester phosphodiesterase) YP_642201.1 KEGG: mpa:MAP0189 hypothetical protein YP_642202.1 PFAM: Rhodanese-like; KEGG: nfa:nfa1230 hypothetical protein YP_642204.1 PFAM: manganese and iron superoxide dismutase; KEGG: mpa:MAP0187c superoxide dismutase YP_642205.1 KEGG: mpa:MAP0186c hypothetical protein YP_642206.1 PFAM: protein of unknown function UPF0016; KEGG: mtc:MT3963 hypothetical protein YP_642207.1 KEGG: mle:ML0069 hypothetical protein YP_642208.1 KEGG: nfa:nfa5150 hypothetical protein YP_642209.1 KEGG: nfa:nfa5140 hypothetical protein YP_642210.1 KEGG: sco:SCO3115 hypothetical protein YP_642211.1 KEGG: mpa:MAP0184c hypothetical protein YP_642212.1 PFAM: copper resistance protein CopC; KEGG: nfa:nfa1100 hypothetical protein YP_642213.1 PFAM: copper resistance D; KEGG: nfa:nfa1090 hypothetical protein YP_642214.1 KEGG: mpa:MAP0182c hypothetical protein YP_642215.1 PFAM: regulatory protein, MerR TipAS antibiotic-recognition; KEGG: sco:SCO3413 transcriptional regulator YP_642216.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity YP_642217.1 PFAM: FAD dependent oxidoreductase; KEGG: mpa:MAP0180 hypothetical protein YP_642218.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb3885 transcriptional regulatory repressor protein (TetR-family) EthR YP_642219.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_642220.1 PFAM: Catalase-related Catalase-like; KEGG: sma:SAV348 putative catalase YP_642221.1 PFAM: PHP-like; SMART: Phosphoesterase PHP-like; KEGG: mpa:MAP0177 Hypothetical DNA polymerase YP_642222.1 KEGG: sco:SCO1891 hypothetical protein YP_642223.1 PFAM: luciferase-like; KEGG: mpa:MAP0175c hypothetical protein YP_642224.1 KEGG: mpa:MAP0174 hypothetical protein YP_642225.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate YP_642226.1 PFAM: glutamine amidotransferase, class-II glutamate synthase, alpha subunit-like ferredoxin-dependent glutamate synthase glutamate synthase; KEGG: mpa:MAP0172 glutamate synthase (NADPH) large chain YP_642227.1 TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: thioesterase superfamily YP_642228.1 TIGRFAM: MIP family channel proteins; PFAM: major intrinsic protein; KEGG: bmb:BruAb1_1976 AqpZ, aquaporin Z YP_642229.1 PFAM: protein of unknown function DUF732; KEGG: mbo:Mb0574c possible conserved secreted protein YP_642230.1 KEGG: mle:ML2380 possible secreted protein YP_642232.1 PFAM: Ferritin and Dps; KEGG: mpa:MAP3560 putative DNA-binding protein YP_642233.1 KEGG: mpa:MAP3559 hypothetical protein YP_642234.1 PFAM: Polyprenyl synthetase; KEGG: mpa:MAP3069 IdsA2_2 YP_642235.1 PFAM: amine oxidase FAD dependent oxidoreductase; KEGG: mpa:MAP3070 hypothetical protein YP_642236.1 PFAM: Squalene/phytoene synthase; KEGG: sco:SCO0187 putative phytoene synthase YP_642237.1 KEGG: mpa:MAP3072 hypothetical protein YP_642238.1 KEGG: mpa:MAP3073 hypothetical protein YP_642239.1 PFAM: UbiE/COQ5 methyltransferase Methyltransferase type 11 Methyltransferase type 12; KEGG: mpa:MAP3074 CrtT YP_642240.1 PFAM: amine oxidase FAD dependent oxidoreductase; KEGG: mpa:MAP3075 hypothetical protein YP_642241.1 PFAM: Rieske [2Fe-2S] region; KEGG: mpa:MAP3076 hypothetical protein YP_642242.1 PFAM: protein of unknown function UPF0089; KEGG: mpa:MAP3657 hypothetical protein YP_642243.1 PFAM: alpha/beta hydrolase fold; KEGG: nfa:nfa15720 putative hydrolase YP_642244.1 PFAM: protein of unknown function DUF427; KEGG: mbo:Mb0145 hypothetical protein YP_642245.1 KEGG: mpa:MAP2887c hypothetical protein YP_642246.1 PFAM: FAD dependent oxidoreductase; KEGG: sma:SAV3959 hypothetical protein YP_642247.1 KEGG: mbo:Mb1942c hypothetical protein YP_642248.1 PFAM: O-methyltransferase-like; KEGG: mlo:mll3178 hypothetical protein YP_642249.1 PFAM: NAD-dependent epimerase/dehydratase 3-beta hydroxysteroid dehydrogenase/isomerase NmrA-like Male sterility-like; KEGG: mtc:MT0147 dihydroflavonol-4-reductase YP_642250.1 KEGG: mpa:MAP3555 hypothetical protein YP_642251.1 PFAM: Methionine sulfoxide reductase B; KEGG: sme:SMa1894 peptide methionine sulfoxide reductase YP_642252.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress YP_642253.1 PFAM: cytochrome P450; KEGG: mbo:Mb0141 probable cytochrome P450 138 CYP138 YP_642254.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb0140c possible transcriptional regulatory protein YP_642255.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa46580 putative transcriptional regulator YP_642256.1 KEGG: mpa:MAP1663 hypothetical protein YP_642257.1 PFAM: CBS; KEGG: sco:SCO0210 hypothetical protein YP_642258.1 PFAM: Integral membrane protein TerC; KEGG: fra:Francci3_1628 integral membrane protein TerC YP_642259.1 KEGG: pca:Pcar_1036 putative transcriptional regulator, AsnC family YP_642260.1 KEGG: mpa:MAP1664c hypothetical protein YP_642261.1 PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: mpa:MAP1665c hypothetical protein YP_642262.1 PFAM: glycosyl transferase, group 1; KEGG: mpa:MAP1666c hypothetical protein YP_642263.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: sma:SAV4192 putative ATP/GTP-binding protein YP_642264.1 KEGG: mbo:Mb1980 hypothetical protein YP_642267.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP0032c FadE25_1 YP_642268.1 PFAM: protein of unknown function DUF427; KEGG: mpa:MAP1006 hypothetical protein YP_642269.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: mpa:MAP3263c hypothetical protein YP_642270.1 KEGG: mpa:MAP1282c hypothetical protein YP_642271.1 KEGG: nfa:nfa29810 hypothetical protein YP_642272.1 KEGG: mpa:MAP1280c hypothetical protein YP_642273.1 PFAM: ANTAR PAS fold-3; KEGG: mpa:MAP3269 hypothetical protein YP_642274.1 PFAM: isochorismatase hydrolase; KEGG: mtc:MT2103 pyrazinamidase / nicotinamidase YP_642275.1 KEGG: mpa:MAP3262c GlgX_2; TIGRFAM: Glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13-like alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain YP_642276.1 KEGG: mpa:MAP3543 hypothetical protein YP_642277.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP2023c hypothetical protein YP_642278.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: mpa:MAP2227 putative acyl-CoA dehydrogenase YP_642279.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP2228 putative acyl-CoA dehydrogenase YP_642280.1 KEGG: mpa:MAP3529 hypothetical protein YP_642281.1 KEGG: mpa:MAP3528 putative maltase precursor; TIGRFAM: Trehalose synthase-like; PFAM: alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain YP_642282.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: nfa:nfa29520 hypothetical protein YP_642283.1 TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: syf:Synpcc7942_2592 orotate phosphoribosyltransferase YP_642284.1 PFAM: ABC transporter related TOBE Transport-associated OB; SMART: ATPase; KEGG: blo:BL0341 similar to ATP binding protein of ABC transporter YP_642285.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: blo:BL0342 possible permease of ABC transporter YP_642286.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: blo:BL0343 possible permease protein of ABC transporter system YP_642287.1 PFAM: extracellular solute-binding protein, family 1; KEGG: blo:BL0344 possible solute binding protein of ABC transporter system YP_642288.1 KEGG: tbr:Tb927.8.4110 flagellum-adhesion glycoprotein YP_642289.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mbo:Mb0126c hypothetical protein YP_642292.1 KEGG: nfa:nfa50580 hypothetical protein YP_642293.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone YP_642294.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa29590 putative transcriptional regulator YP_642295.1 KEGG: nfa:nfa29640 hypothetical protein YP_642296.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_642297.1 TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; KEGG: mpa:MAP3134c hypothetical protein YP_642298.1 TIGRFAM: Mammalian cell entry; PFAM: Mammalian cell entry related; KEGG: mtc:MT0618 virulence factor YP_642299.1 KEGG: mpa:MAP2843c hypothetical protein YP_642301.1 PFAM: Phosphoglycerate mutase; KEGG: mpa:MAP3481 LpqD YP_642302.1 PFAM: MMPL; KEGG: sma:SAV3618 putative transmembrane transport protein YP_642303.1 KEGG: mpa:MAP1671 hypothetical protein YP_642304.1 KEGG: mpa:MAP3155c hypothetical protein YP_642305.1 KEGG: nfa:nfa50570 hypothetical protein YP_642306.1 KEGG: mpa:MAP0117 hypothetical protein YP_642308.1 PFAM: Rhomboid-like protein; KEGG: mtc:MT0119 rhomboid family protein YP_642309.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_642310.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_642311.1 PFAM: helix-turn-helix, AraC type; KEGG: sco:SCO6448 AraC-like transcriptional regulator YP_642312.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_642313.1 KEGG: mpa:MAP1750 hypothetical protein YP_642314.1 PFAM: cytochrome P450; KEGG: mpa:MAP0336c hypothetical protein YP_642316.1 PFAM: ATP-binding region, ATPase-like; KEGG: mpa:MAP0130 hypothetical protein YP_642317.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mpa:MAP4309 hypothetical protein YP_642318.1 PFAM: GAF Stage II sporulation E; SMART: Protein phosphatase 2C-like; KEGG: sco:SCO7748 hypothetical protein YP_642319.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: cobalamin B12-binding; KEGG: sco:SCO7749 hypothetical protein YP_642320.1 KEGG: mag:amb3299 RTX toxins and related Ca2+-binding protein YP_642324.1 PFAM: protein of unknown function DUF58; KEGG: mhu:Mhun_0602 protein of unknown function DUF58 YP_642325.1 PFAM: ATPase associated with various cellular activities, AAA_3 ATPase associated with various cellular activities, AAA_5; KEGG: blo:BL1811 widely conserved MoxR-like protein in magnesium chelatase family YP_642327.1 KEGG: lma:LmjF35.0290 hypothetical protein, conserved YP_642328.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP4291c hypothetical protein YP_642329.1 PFAM: alpha/beta hydrolase fold; KEGG: mbo:Mb0079c probable oxidoreductase YP_642330.1 PFAM: regulatory protein, TetR; KEGG: mpa:MAP1783 hypothetical protein YP_642331.1 KEGG: mbo:Mb0091 hypothetical protein YP_642332.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP2370c hypothetical protein YP_642333.1 PFAM: lipolytic enzyme, G-D-S-L; KEGG: sme:SMa1993 hypothetical protein YP_642334.1 TIGRFAM: Transport protein; PFAM: MMPL; KEGG: mbo:Mb0695c probable conserved transmembrane transport protein MmpL5 YP_642335.1 PFAM: Mycobacterium membrane; KEGG: mbo:Mb0696c possible conserved membrane protein MmpS5 YP_642336.1 KEGG: mpa:MAP1630c hypothetical protein YP_642337.1 PFAM: zinc/iron permease; KEGG: nfa:nfa52720 hypothetical protein YP_642339.1 KEGG: mpa:MAP3243 hypothetical protein YP_642341.1 PFAM: amino acid permease-associated region; KEGG: pfo:Pfl_2793 amino acid permease-associated region YP_642342.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_CH02364 hypothetical protein YP_642343.1 PFAM: beta-lactamase; KEGG: mbo:Mb3804 putative lipase LipE YP_642344.1 PFAM: ANTAR PAS fold-3; KEGG: nfa:nfa43830 putative transcription antitermination regulator YP_642345.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mpa:MAP0380 hypothetical protein YP_642346.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpa:MAP1428c hypothetical protein YP_642347.1 PFAM: protein of unknown function DUF1295; KEGG: aci:ACIAD1631 hypothetical protein YP_642348.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: sma:SAV7140 putative acyl-CoA dehydrogenase YP_642349.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: tfu:Tfu_2310 putative acyl-CoA dehydrogenase YP_642350.1 KEGG: cyb:CYB_0230 GTP cyclohydrolase II domain protein YP_642351.1 PFAM: protein of unknown function DUF1688; KEGG: bja:blr7238 hypothetical protein YP_642352.1 TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: lpp:lpp2196 uracil phosphoribosyltransferase YP_642353.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B2548 FAD dependent oxidoreductase YP_642354.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nph:NP3984A homolog 3 to lyase/dioxygenase YP_642355.1 KEGG: mpa:MAP1910c hypothetical protein YP_642357.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: uvs039; Uvs039 YP_642358.1 proposed role in polysaccahride synthesis YP_642359.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sco:SCO4416 monooxygenase YP_642360.1 PFAM: protein of unknown function UPF0061; KEGG: mpa:MAP3154 hypothetical protein YP_642361.1 KEGG: mpa:MAP1644 hypothetical protein YP_642362.1 PFAM: HpcH/HpaI aldolase; KEGG: mbo:Mb3102c hypothetical protein YP_642364.1 PFAM: peptidase S58, DmpA; KEGG: family S58 unassigned peptidase YP_642365.1 PFAM: regulatory protein, TetR; KEGG: baa:BA_3806 bacterial regulatory proteins, TetR family YP_642366.1 KEGG: mpa:MAP1473c hypothetical protein YP_642367.1 KEGG: mpa:MAP0934 hypothetical protein YP_642368.1 TIGRFAM: GGDEF domain; PFAM: GGDEF; KEGG: nfa:nfa1410 hypothetical protein YP_642369.1 PFAM: acyl-CoA dehydrogenase-like Acyl-CoA dehydrogenase, type 2-like; KEGG: mpa:MAP1656 hypothetical protein YP_642370.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1861c probable oxidoreductase YP_642371.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sco:SCO4674 hypothetical protein YP_642372.1 TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein AIR synthase related protein-like; KEGG: mpa:MAP0366 selenide, water dikinase YP_642373.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis YP_642374.1 TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor, GTP-binding elongation factor Tu, domain 2; KEGG: mpa:MAP0364c selenocysteine-specific elongation factor YP_642375.1 PFAM: transcriptional regulator PadR-like; KEGG: nfa:nfa19230 hypothetical protein YP_642376.1 KEGG: nfa:nfa19240 hypothetical protein YP_642377.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: mpa:MAP0367 formate dehydrogenase alpha subunit YP_642378.1 PFAM: molydopterin dinucleotide-binding region; KEGG: mpa:MAP0368 formate dehydrogenase alpha subunit YP_642379.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: mpa:MAP0369 formate dehydrogenase, iron-sulfur subunit (formate dehydrogenase beta subunit) YP_642380.1 PFAM: Polysulphide reductase, NrfD; KEGG: mpa:MAP0370 hypothetical protein YP_642381.1 PFAM: cutinase; KEGG: mpa:MAP0333 hypothetical protein YP_642382.1 PFAM: cobalamin synthesis protein, P47K cobalamin synthesis CobW-like; KEGG: mpa:MAP1730c hypothetical protein YP_642384.1 KEGG: mbo:Mb2712c probable conserved integral membrane alanine and leucine rich protein YP_642385.1 KEGG: mpa:MAP4090c hypothetical protein YP_642386.1 KEGG: nfa:nfa43770 hypothetical protein YP_642388.1 PFAM: protein of unknown function DUF1348; KEGG: bte:BTH_II0011 protein of unknown function (DUF1348) superfamily YP_642389.1 KEGG: rso:RSc0215 short chain dehydrogenase YP_642390.1 PFAM: O-methyltransferase-like; KEGG: mtc:MT1187 O-methyltransferase, putative YP_642391.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa24140 putative transcriptional regulator YP_642392.1 KEGG: tfu:Tfu_2798 putative DNA-binding protein YP_642393.1 PFAM: FAD dependent oxidoreductase; KEGG: tfu:Tfu_2797 D-amino-acid dehydrogenase YP_642394.1 PFAM: transcription elongation factor GreA/GreB region; KEGG: mbo:Mb1109c probable transcription elongation factor GreA (transcript cleavage factor GreA) YP_642395.1 activates fatty acids by binding to coenzyme A YP_642396.1 PFAM: ANTAR YP_642397.1 PFAM: GAF ANTAR; KEGG: sma:SAV4628 hypothetical protein YP_642398.1 PFAM: ANTAR; KEGG: sma:SAV4629 hypothetical protein YP_642399.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: nfa:nfa21950 putative hydantoinase YP_642400.1 PFAM: Hydantoinase/oxoprolinase Hydantoinaseoxoprolinase-like; KEGG: bur:Bcep18194_B3097 5-oxoprolinase (ATP-hydrolyzing) YP_642401.1 PFAM: regulatory protein, TetR; KEGG: ppu:PP1941 hypothetical protein YP_642402.1 TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cgb:cg3038 permease of the major facilitator superfamily YP_642403.1 PFAM: regulatory protein, MarR; KEGG: mbo:Mb2354 hypothetical protein YP_642404.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR 3-beta hydroxysteroid dehydrogenase/isomerase NmrA-like Male sterility-like; KEGG: nfa:nfa24150 putative dehydrogenase YP_642405.1 PFAM: regulatory protein, MarR; KEGG: sme:SMc01908 putative transcription regulator protein YP_642406.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nfa:nfa20320 hypothetical protein YP_642407.1 PFAM: Cupin 4; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase; KEGG: jan:Jann_0385 cupin 4 YP_642408.1 PFAM: Sucraseferredoxin-like; KEGG: sco:SCO5830 hypothetical protein YP_642409.1 KEGG: mpa:MAP3338 hypothetical protein YP_642410.1 TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: thioesterase superfamily; KEGG: fra:Francci3_0826 phenylacetic acid degradation-related protein YP_642411.1 PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase NmrA-like; KEGG: mlo:mlr1895 hypothetical protein YP_642412.1 PFAM: regulatory protein, TetR; KEGG: mbo:Mb3198c probable transcriptional regulatory protein (probably TetR/AcrR-family) YP_642413.1 PFAM: General substrate transporter major facilitator superfamily MFS_1; KEGG: mbo:Mb3503c probable dicarboxylic acid transport integral membrane protein KgtP (dicarboxylate transporter) YP_642414.1 KEGG: nfa:nfa20770 putative ScnB homolog YP_642415.1 PFAM: Nitrile hydratase alpha chain; KEGG: nfa:nfa20750 putative ScnC homolog YP_642416.1 KEGG: nfa:nfa20740 putative ScnB homolog YP_642418.1 PFAM: helicase-like DEAD/DEAH box helicase-like; KEGG: tfu:Tfu_0878 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal YP_642419.1 PFAM: NUDIX hydrolase; KEGG: bja:blr1297 hypothetical protein YP_642420.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sco:SCO1087 putative aldolase YP_642421.1 PFAM: regulatory protein, ArsR; KEGG: nfa:nfa28340 putative transcriptional regulator YP_642422.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sco:SCO0477 hypothetical protein YP_642423.1 KEGG: nfa:nfa44160 putative helicase YP_642424.1 KEGG: nfa:nfa49850 hypothetical protein YP_642425.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: lil:LB286 glutamate synthase YP_642426.1 KEGG: mbo:Mb3123 hypothetical protein YP_642427.1 TIGRFAM: GGDEF domain; PFAM: GGDEF; KEGG: tbd:Tbd_2814 putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain YP_642428.1 KEGG: lxx:Lxx14210 hypothetical protein YP_642429.1 PFAM: cobalt transport protein; KEGG: lxx:Lxx14220 ABC-type cobalt transport system YP_642430.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: lxx:Lxx14230 ABC transporter, ATP-binding protein YP_642431.1 KEGG: lxx:Lxx14240 ABC transporter, permease protein YP_642432.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: rpb:RPB_1687 acyl-CoA dehydrogenase-like YP_642433.1 PFAM: acyl-CoA dehydrogenase-like; KEGG: sco:SCO1198 acyl-CoA dehydrogenase YP_642434.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mtc:MT1915 hypothetical protein YP_642435.1 PFAM: regulatory protein, LysR LysR, substrate-binding; KEGG: sfl:SF1616 putative LysR-type transcriptional regulator YP_642436.1 PFAM: cobalt transport protein; KEGG: dra:DR2468 putative cobalt transport system permease protein YP_642437.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: tfu:Tfu_2313 ABC-type cobalt transport system ATPase component YP_642438.1 PFAM: BioY protein; KEGG: tfu:Tfu_2314 similar to uncharacterized conserved protein YP_642439.1 PFAM: polysaccharide deacetylase; KEGG: sme:SMb21100 putative saccharide deacetylase, slightly similar to NodB protein YP_642440.1 TIGRFAM: agmatinase, putative; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: tfu:Tfu_0058 putative agmatinase YP_642441.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpb:RPB_2467 3-oxoacyl-(acyl-carrier-protein) reductase YP_642442.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0754c hypothetical protein YP_642443.1 PFAM: amino acid permease-associated region; KEGG: pfo:Pfl_1043 amino acid permease-associated region YP_642444.1 PFAM: purine catabolism PurC-like; KEGG: tfu:Tfu_0057 putative regulatory protein YP_642445.1 PFAM: Hemerythrin HHE cation binding region; KEGG: sco:SCO0212 hypothetical protein YP_642446.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: mpa:MAP2726c FdxA YP_642447.1 PFAM: Helix-turn-helix, type 11; KEGG: mpa:MAP2725c hypothetical protein YP_642448.1 KEGG: mpa:MAP3178c hypothetical protein YP_642449.1 KEGG: mpa:MAP0560 FdxD YP_642450.1 PFAM: Amidase; KEGG: mpa:MAP0581c 6-aminohexanoate-cyclic-dimer hydrolase, putative YP_642451.1 PFAM: sigma-70 region 2 Sigma-70, region 4 type 2; KEGG: nfa:nfa28080 putative sigma factor YP_642452.1 PFAM: DGPFAETKE; KEGG: nfa:nfa28070 hypothetical protein YP_642453.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: sma:SAV3929 putative oxidoreductase YP_642454.1 PFAM: monooxygenase, FAD-binding; KEGG: pfl:PFL_2296 FAD-binding monooxygenase, PheA/TfdB family YP_642455.1 KEGG: cef:CE2505 hypothetical protein YP_642456.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: cef:CE1101 putative ABC transporter ATP-binding protein YP_642457.1 PFAM: cutinase; KEGG: mbo:Mb3482 probable cutinase precursor CUT4 YP_642458.1 PFAM: glycoside hydrolase, family 6; KEGG: mbo:Mb0063 possible cellulase CelA1 (endoglucanase) (endo-1,4-beta-glucanase) (fi-cmcase) (carboxymethyl cellulase) YP_642459.1 PFAM: Pirin-like; KEGG: sco:SCO0468 hypothetical protein YP_642460.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR Male sterility-like; KEGG: sco:SCO0511 dehydrogenase (secreted protein) YP_642461.1 PFAM: MOSC; KEGG: mpa:MAP1678 hypothetical protein YP_642462.1 PFAM: alpha/beta hydrolase fold; KEGG: sco:SCO5986 oxidoreductase YP_642463.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa49270 putative transcriptional regulator YP_642464.1 KEGG: tth:TT_P0070 hypothetical protein YP_642465.1 KEGG: nfa:nfa34440 hypothetical protein YP_642466.1 PFAM: D-aminoacylase-like Amidohydrolase 3; KEGG: mpa:MAP4314 hypothetical protein YP_642467.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: nfa:nfa18780 putative thioredoxin YP_642468.1 PFAM: FAD dependent oxidoreductase FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: noc:Noc_2006 putative oxidoreductase YP_642469.1 PFAM: beta-lactamase-like Rhodanese-like; KEGG: tfu:Tfu_3085 rhodanese-like protein YP_642470.1 PFAM: Rhodanese-like; KEGG: tfu:Tfu_3083 rhodanese-like protein YP_642471.1 PFAM: protein of unknown function DUF81; KEGG: cef:CE0317 hypothetical protein YP_642472.1 PFAM: protein of unknown function DUF156; KEGG: mbo:Mb1795A hypothetical protein YP_642473.1 PFAM: protein of unknown function DUF202 YP_642474.1 PFAM: protein of unknown function DUF202; KEGG: sco:SCO1687 hypothetical protein YP_642476.1 TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter ATPase, P type cation/copper-transporter Heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase E1-E2 ATPase-associated region; KEGG: cgb:cg3281 probable cation-transporting ATPase transmembrane protein YP_642477.1 PFAM: protein of unknown function DUF305; KEGG: fra:Francci3_1610 protein of unknown function DUF305 YP_642478.1 TIGRFAM: 40-residue YVTN beta-propeller repeat; KEGG: ppu:PP5392 hypothetical protein YP_642479.1 PFAM: aldo/keto reductase; KEGG: mlo:mlr2172 probable oxidoreductase YP_642480.1 PFAM: regulatory protein, MarR; KEGG: sme:SMc01908 putative transcription regulator protein YP_642481.1 PFAM: MaoC-like dehydratase; KEGG: nfa:nfa51180 hypothetical protein YP_642482.1 KEGG: nfa:nfa26320 hypothetical protein YP_642483.1 KEGG: mbo:Mb3123 hypothetical protein YP_642484.1 PFAM: regulatory protein GntR, HTH GntR-like; KEGG: sma:SAV6630 putative GntR-family transcriptional regulator YP_642485.1 KEGG: mpa:MAP1778c putative gluconokinase; TIGRFAM: Carbohydrate kinase, thermoresistant glucokinase; PFAM: shikimate kinase YP_642486.1 TIGRFAM: gluconate transporter; PFAM: Gluconate transporter Citrate transporter TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: eca:ECA4158 gluconate permease YP_642487.1 KEGG: bcz:BCZK4645 hypothetical protein YP_642488.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: fra:Francci3_4105 alcohol dehydrogenase, zinc-binding YP_642489.1 activates fatty acids by binding to coenzyme A YP_642490.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: lil:LB286 glutamate synthase YP_642493.1 KEGG: mbo:Mb2929 probable conserved alanine rich lipoprotein LppW YP_642494.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mpa:MAP2949c hypothetical protein YP_642495.1 PFAM: regulatory protein, TetR; KEGG: sma:SAV705 putative TetR-family transcriptional regulator YP_642496.1 PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: sco:SCO2477 3-oxoacyl-(ACP) reductase YP_642497.1 PFAM: alpha/beta hydrolase fold; KEGG: nfa:nfa3710 hypothetical protein YP_642498.1 PFAM: regulatory protein, MerR; KEGG: sco:SCO5025 transcriptional regulator YP_642499.1 KEGG: tfu:Tfu_2134 DNA topoisomerase (ATP-hydrolyzing); PFAM: DNA gyrase, subunit B-like ATP-binding region, ATPase-like; SMART: DNA topoisomerase, type IIA, subunit B or-like YP_642500.1 PFAM: DNA gyrase/topoisomerase IV, subunit A DNA gyrase C-terminal repeat, beta-propeller; KEGG: lxx:Lxx10360 DNA gyrase subunit A YP_642501.1 PFAM: glutamine synthetase, catalytic region; KEGG: tcx:Tcr_1798 glutamate--ammonia ligase YP_642502.1 KEGG: bja:bll7862 homoserine O-acetyltransferase YP_642503.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: ava:Ava_4238 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_642504.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: tfu:Tfu_1265 2-hydroxy-3-oxopropionate reductase YP_642505.1 PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: mpa:MAP4203 hypothetical protein YP_642506.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppu:PP3635 sulfonate ABC transporter, permease protein, putative YP_642507.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PC00168 probable aliphatic sulphonate ABC transporter, permease protein YP_642508.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: mta:Moth_0467 ABC transporter related YP_642509.1 KEGG: bcl:ABC3748 nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein YP_642510.1 PFAM: regulatory protein, TetR; KEGG: nfa:nfa22230 putative transcriptional regulator YP_642511.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: mpa:MAP1667 hypothetical protein YP_642512.1 KEGG: mpa:MAP1928c hypothetical protein YP_642514.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: sco:SCO5759 hypothetical protein YP_642515.1 PFAM: regulatory protein, ArsR Helix-turn-helix, type 11; KEGG: sco:SCO5758 transcriptional regulator YP_642516.1 KEGG: bur:Bcep18194_C7182 serine-type D-Ala-D-Ala carboxypeptidase; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: beta-lactamase YP_642517.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: sco:SCO5077 protein involved in polyketide synthesis YP_642519.1 PFAM: protein of unknown function DUF222; KEGG: mtu:Rv1128c hypothetical protein Rv1128c YP_642520.1 PFAM: transposase, mutator type; KEGG: mbo:Mb3142 probable transposase YP_642521.1 KEGG: mtc:MT0103 hypothetical protein YP_642522.1 KEGG: mpa:MAP0071 replicative DNA helicase; TIGRFAM: Protein splicing (intein) site; PFAM: DnaB-like helicase-like; SMART: Hedgehog/intein hint-like YP_642523.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_642524.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_642525.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA YP_642526.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_642527.1 KEGG: mpa:MAP0065 hypothetical protein YP_642528.1 PFAM: glycosyl transferase, family 51 penicillin-binding protein, transpeptidase; KEGG: mpa:MAP0064 penicillin-binding protein YP_642529.1 KEGG: mpa:MAP0063 hypothetical protein YP_642530.1 PFAM: protein of unknown function DUF1707; KEGG: mtc:MT0054 hypothetical protein YP_642531.1 PFAM: transcriptional regulator PadR-like; KEGG: mpa:MAP0061c hypothetical protein YP_642532.1 PFAM: Myo-inositol-1-phosphate synthase Myo-inositol-1-phosphate synthase, GAPDH-like; KEGG: mpa:MAP0060c 1L-myo-inositol-1-phosphate synthase YP_642533.1 PFAM: alpha/beta hydrolase fold; KEGG: mbo:Mb0046c possible hydrolase YP_642534.1 KEGG: nmu:Nmul_A2198 hypothetical protein YP_642535.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: protein of unknown function DUF839; KEGG: nfa:nfa55300 hypothetical protein YP_642537.1 KEGG: mpa:MAP0054c hypothetical protein YP_642538.1 PFAM: regulatory protein GntR, HTH; KEGG: mbo:Mb0044c probable transcriptional regulatory protein (probably GntR-family) YP_642539.1 TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component extracellular solute-binding protein, family 3; KEGG: mpa:MAP0052c putative glutamine transport system permease proetin / substrate-binding proetin YP_642540.1 PFAM: ABC transporter related; SMART: ATPase; KEGG: mpa:MAP0051c putative glutamine transport system ATP-binding proetin YP_642541.1 PFAM: regulatory protein, MarR; KEGG: mpa:MAP0050c hypothetical protein YP_642542.1 KEGG: nfa:nfa55270 hypothetical protein YP_642543.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP0049c short chain dehydrogenase YP_642544.1 KEGG: mpa:MAP0548c hypothetical protein YP_642545.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase YP_642546.1 KEGG: mpa:MAP0047c hypothetical protein YP_642547.1 KEGG: mtc:MT0044 hypothetical protein YP_642548.1 PFAM: protein of unknown function DUF179; KEGG: mbo:Mb0039 putative transcriptional regulator YP_642549.1 KEGG: mbo:Mb0038c probable conserved integral membrane protein YP_642550.1 KEGG: mpa:MAP0043c hypothetical protein YP_642551.1 PFAM: protein kinase; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: sco:SCO3821 serine/threonine protein kinase YP_642552.1 KEGG: mpa:MAP4331c hypothetical protein YP_642553.1 TIGRFAM: uncharacterized domain HDIG; PFAM: Polynucleotide adenylyltransferase region metal-dependent phosphohydrolase, HD subdomain; KEGG: mbo:Mb3937c poly(A) polymerase PcnA (polynucleotide adenylyltransferase) (NTP polymerase) (RNA adenylating enzyme) (poly(A) polymerase) YP_642554.1 PFAM: NUDIX hydrolase; KEGG: mbo:Mb3938 hypothetical protein YP_642555.1 KEGG: mbo:Mb3939 hypothetical protein YP_642556.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN-like; KEGG: mtc:MT4029 putative virulence factor YP_642557.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription: in Mycobacterium bovis this protein has been shown to be active at high temperatures and during stationary phase YP_642558.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase FAD dependent oxidoreductase; KEGG: mpa:MAP4339 thioredoxin reductase YP_642559.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mbo:Mb3945 thioredoxin TrxC (TRX) (MPT46) YP_642560.1 PFAM: Peptidoglycan-binding domain 1 cell wall hydrolase/autolysin; KEGG: mpa:MAP4341 putative hydrolase YP_642561.1 KEGG: mpa:MAP4342c hypothetical protein YP_642562.1 TIGRFAM: parB-like partition proteins; PFAM: ParB-like nuclease; KEGG: mpa:MAP4343c probable chromosome partitioning protein ParB YP_642563.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mtc:MT4037 Soj family protein YP_642564.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA YP_642565.1 PFAM: single-stranded nucleic acid binding R3H; KEGG: mtc:MT4039 R3H domain-containing protein YP_642566.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria YP_642567.1 PFAM: protein of unknown function DUF37; KEGG: mbo:Mb3953c hypothetical protein YP_642568.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates YP_642569.1 in Escherichia coli transcription of this gene is enhanced by polyamines YP_642580.1 KEGG: lma:LmjF35.0290 hypothetical protein, conserved YP_642581.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: dar:Daro_2777 putative pyruvate ferredoxin/flavodoxin oxidoreductase YP_642583.1 KEGG: nfa:pnf1890 hypothetical protein YP_642584.1 KEGG: cef:CE0414 TnpC protein YP_642585.1 KEGG: mbo:Mb2838c probable transposase YP_642586.1 PFAM: Integrase, catalytic region; KEGG: cdi:DIP0764 putative transposase YP_642587.1 KEGG: mtu:Rv3475 possible transposase for insertion element IS6110 [second part] YP_642588.1 PFAM: transposase IS3/IS911; KEGG: mbo:Mb2839c probable transposase YP_642589.1 PFAM: transposase, mutator type; KEGG: sco:SCP1.259 putative transposon transposase YP_642591.1 PFAM: regulatory proteins, IclR; KEGG: nfa:nfa22460 putative transcriptional regulator YP_642592.1 PFAM: Hydratase/decarboxylase; KEGG: nfa:nfa33180 putative hydratase YP_642593.1 catalyzes the formation of acetyl-CoA from acetalaldehyde YP_642594.1 catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate YP_642595.1 KEGG: mbo:Mb2011c hypothetical protein YP_642596.1 PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP0693 2-hydroxy-6-phenylhexa-2,4-dienoic acid hydrolase YP_642597.1 PFAM: ring hydroxylating dioxygenase, alpha subunit Rieske [2Fe-2S] region; KEGG: bbr:BB0728 hydroxylating alpha subunit of a dioxygenase system YP_642598.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: plu:plu2205 3-phenylpropionate dioxygenase beta subunit (digoxigenin beta subunit) YP_642599.1 PFAM: oxidoreductase-like Oxidoreductase-like homoserine dehydrogenase, NAD-binding; KEGG: bbr:BB4777 probable dehydrogenase YP_642600.1 PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: reu:Reut_B4784 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YP_642601.1 PFAM: class II aldolase/adducin-like; KEGG: mpa:MAP2737 FliH YP_642602.1 PFAM: regulatory protein, MarR; KEGG: atc:AGR_C_466 hypothetical protein YP_642603.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: ssn:SSO_3280 putative dehydrogenase YP_642604.1 PFAM: Cupin Cupin 2, conserved barrel; KEGG: reu:Reut_A0378 cupin region YP_642605.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: bbr:BB0730 hydroxylating beta subunit of a dioxygenase system YP_642606.1 PFAM: ring hydroxylating dioxygenase, alpha subunit Rieske [2Fe-2S] region; KEGG: bbr:BB0728 hydroxylating alpha subunit of a dioxygenase system YP_642608.1 KEGG: tfu:Tfu_1482 hypothetical protein YP_642609.1 PFAM: protein of unknown function DUF35; KEGG: eli:ELI_14970 hypothetical protein YP_642610.1 KEGG: eli:ELI_14965 putative nonspecific lipid-transfer protein YP_642611.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbr:BB1083 hypothetical protein YP_642612.1 PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: bur:Bcep18194_B1325 zinc-containing alcohol dehydrogenase superfamily YP_642613.1 PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: mpa:MAP2735 hypothetical protein YP_642614.1 PFAM: ring hydroxylating dioxygenase, alpha subunit Rieske [2Fe-2S] region; KEGG: mpa:MAP2734 hypothetical protein YP_642615.1 PFAM: transposase, mutator type; KEGG: sco:SCP1.259 putative transposon transposase YP_642616.1 PFAM: regulatory protein, MarR; KEGG: fra:Francci3_2015 transcriptional regulator, MarR family YP_642617.1 PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV5648 putative efflux membrane protein YP_642622.1 KEGG: mpa:MAP2759 hypothetical protein YP_642623.1 KEGG: mbo:Mb3932c hypothetical protein YP_642625.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB-like helicase-like; KEGG: mbo:Mb0059 probable replicative DNA helicase DnaB YP_642626.1 KEGG: spn:SP1772 cell wall surface anchor family protein YP_642629.1 PFAM: protein of unknown function DUF1643; KEGG: jan:Jann_4033 protein of unknown function DUF1643 YP_642630.1 KEGG: nar:Saro_0626 hypothetical protein YP_642631.1 PFAM: transcription factor WhiB; KEGG: nfa:nfa45800 putative transcriptional regulator YP_642633.1 PFAM: transcription factor WhiB YP_642637.1 PFAM: helix-turn-helix motif; KEGG: nfa:pnf11530 putative DNA-binding protein YP_642638.1 KEGG: mpa:MAP0313c DNA polymerase III epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease YP_642640.1 KEGG: nfa:nfa10250 hypothetical protein YP_642641.1 TIGRFAM: Prevent-host-death protein; PFAM: protein of unknown function DUF172; KEGG: mbo:Mb3392 hypothetical protein YP_642642.1 PFAM: Addiction module toxin, Txe/YoeB; KEGG: mbo:Mb3393 hypothetical protein YP_642644.1 KEGG: tfu:Tfu_1979 hypothetical protein YP_642646.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: noc:Noc_2515 phage SPO1 DNA polymerase-related protein YP_642647.1 KEGG: sme:SMc02155 hypothetical protein YP_642648.1 KEGG: ttj:TTHA1016 hypothetical protein YP_642649.1 PFAM: SNF2-related helicase-like type III restriction enzyme, res subunit; SMART: DEAD/DEAH box helicase-like; KEGG: ttj:TTHA1020 hypothetical protein YP_642653.1 KEGG: dre:541415 zgc:101577 YP_642654.1 KEGG: sil:SPOA0411 hypothetical protein YP_642657.1 KEGG: mtc:MT2035 hypothetical protein YP_642658.1 PFAM: PilT protein-like; KEGG: mbo:Mb2004c hypothetical protein YP_642661.1 PFAM: Integrase, catalytic region; KEGG: cdi:DIP0764 putative transposase YP_642662.1 KEGG: nfa:nfa42930 putative phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB HAD-superfamily hydrolase subfamily IB, PSPase-like; PFAM: Haloacid dehalogenase-like hydrolase YP_642664.1 PFAM: PemK-like protein; KEGG: mbo:Mb1977c hypothetical protein YP_642665.1 KEGG: mbo:Mb1978c hypothetical protein YP_642669.1 KEGG: lma:LmjF35.0540 proteophosphoglycan 5 YP_642671.1 KEGG: cyb:CYB_1139 TonB family protein YP_642677.1 PFAM: transposase, mutator type; KEGG: sco:SCP1.259 putative transposon transposase YP_642680.1 PFAM: CopG-like DNA-binding; KEGG: mbo:Mb0306 hypothetical protein YP_642681.1 KEGG: mtu:Rv0299 hypothetical protein YP_642682.1 PFAM: protein kinase; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: mbo:Mb2115 probable transmembrane serine/threonine-protein kinase J PknJ (protein kinase J) (StpK J) YP_642684.1 PFAM: ATP dependent DNA ligase-like ATP dependent DNA ligase; KEGG: nfa:nfa29400 putative ATP-dependent DNA ligase YP_642687.1 KEGG: mbo:Mb3416c hypothetical protein YP_642688.1 TIGRFAM: Prevent-host-death protein; KEGG: mbo:Mb3417c hypothetical protein YP_642689.1 KEGG: hma:rrnAC0538 hypothetical protein YP_642691.1 KEGG: nfa:nfa11830 hypothetical protein YP_642694.1 KEGG: sco:SCP1.143 hypothetical protein YP_642697.1 KEGG: sco:SCP1.146 putative atp/gtp-binding protein YP_642698.1 KEGG: sco:SCO3511 lipoprotein YP_642699.1 KEGG: sco:SCP1.147 putative integral membrane protein YP_642700.1 KEGG: mpa:MAP2475 hypothetical protein YP_642701.1 KEGG: mbo:Mb1757c hypothetical protein YP_642702.1 KEGG: sco:SCO6263 hypothetical protein YP_642703.1 PFAM: cell division FtsK/SpoIIIE; KEGG: bsu:BG12104 similar to transposon protein YP_642705.1 KEGG: Hep_Hag family YP_642706.1 KEGG: sma:SAV192 putative membrane protein YP_642709.1 KEGG: mpa:MAP4325c hypothetical protein YP_642711.1 PFAM: AAA ATPase, central region; SMART: ATPase; KEGG: mpa:MAP3778 hypothetical protein YP_642712.1 PFAM: protein of unknown function DUF690; KEGG: mpa:MAP3779 hypothetical protein YP_642713.1 PFAM: cell division FtsK/SpoIIIE; KEGG: mpa:MAP3780 hypothetical protein YP_642714.1 KEGG: mbo:Mb0293 PE family protein YP_642715.1 PFAM: PPE protein; KEGG: mpa:MAP1813c hypothetical protein YP_642716.1 KEGG: mpa:MAP3783 hypothetical protein YP_642717.1 KEGG: mbo:Mb0296 low molecular weight protein antigen 7 CFP7 (10 kDa antigen) (CFP-7) (protein TB10.4) YP_642718.1 KEGG: mle:ML2527 hypothetical protein YP_642719.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: mpa:MAP3787 hypothetical protein YP_642720.1 PFAM: protein of unknown function DUF571; KEGG: mtc:MT0303 hypothetical protein YP_642721.1 KEGG: mle:ML0798 hypothetical protein YP_642722.1 KEGG: mle:ML2530 possible DNA-binding protein YP_642724.1 TIGRFAM: parB-like partition proteins; SMART: ParB-like nuclease; KEGG: ttj:TTHA1969 chromosome partitioning protein, ParB family YP_642725.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: bmb:BruAb1_2034 ParA, chromosome partitioning protein YP_642728.1 PFAM: Resolvase-like Recombinase; KEGG: sma:SAV5548 putative integrase/recombinase YP_642729.1 PFAM: AAA ATPase, central region; SMART: ATPase; KEGG: bbr:BB0910 putative ATPase YP_642730.1 KEGG: bbr:BB0911 putative serine protease YP_642731.1 KEGG: neu:NE2310 ABC transporter YP_642732.1 PFAM: transposase, mutator type; KEGG: mbo:Mb3461c possible transposase YP_642733.1 PFAM: phage integrase phage integrase-like SAM-like; KEGG: fra:Francci3_3734 phage integrase-like SAM-like YP_642734.1 PFAM: phage integrase; KEGG: ser:SERP2507 transposase B YP_642735.1 KEGG: sar:SAR0725 Tn554 transposase C YP_642736.1 KEGG: mpa:MAP3759c hypothetical protein YP_642738.1 PFAM: Integrase, catalytic region; KEGG: mpa:MAP2156 hypothetical protein YP_642739.1 PFAM: transposase IS3/IS911; KEGG: mpa:MAP2155 IS6110 YP_642740.1 PFAM: transposase, mutator type; KEGG: sco:SCP1.259 putative transposon transposase YP_642741.1 KEGG: neu:NE2310 ABC transporter YP_642742.1 PFAM: transposase IS3/IS911; KEGG: mpa:MAP2155 IS6110 YP_642743.1 PFAM: Integrase, catalytic region; KEGG: mpa:MAP2156 hypothetical protein YP_642744.1 KEGG: mma:MM1666 ATPase involved in DNA repair YP_642745.1 PFAM: Integrase, catalytic region; KEGG: lxx:Lxx04280 transposase, undefined YP_642746.1 PFAM: transposase IS3/IS911; KEGG: lxx:Lxx03690 transposase YP_642747.1 KEGG: sco:SCO3936 plasmid replication initiator protein YP_642748.1 PFAM: cell division FtsK/SpoIIIE; SMART: ATPase; KEGG: fra:Francci3_3398 cell division FtsK/SpoIIIE YP_642749.1 KEGG: sco:SCO3933 regulatory protein YP_642750.1 KEGG: fra:Francci3_1136 transcriptional regulator, XRE family YP_642751.1 PFAM: NUDIX hydrolase; KEGG: fra:Francci3_1135 NUDIX hydrolase YP_642752.1 TIGRFAM: uncharacterized domain HDIG; PFAM: metal-dependent phosphohydrolase, HD subdomain; KEGG: fra:Francci3_1134 metal dependent phosphohydrolase YP_642753.1 PFAM: regulatory protein, TetR; KEGG: sco:SCO1568 TetR-family transcriptional regulator YP_642754.1 KEGG: mpa:MAP3129 hypothetical protein YP_642755.1 PFAM: MMPL; KEGG: mpa:MAP3131 hypothetical protein YP_642756.1 PFAM: Mycobacterium membrane; KEGG: mpa:MAP3130 MmpS2 YP_642757.1 PFAM: transposase IS3/IS911; KEGG: mbo:Mb2839c probable transposase YP_642758.1 KEGG: mtu:Rv3475 possible transposase for insertion element IS6110 [second part] YP_642759.1 PFAM: Integrase, catalytic region; KEGG: cdi:DIP0764 putative transposase YP_642760.1 KEGG: mbo:Mb2838c probable transposase YP_642761.1 KEGG: cef:CE1947 putative transposase YP_642762.1 PFAM: Integrase, catalytic region; KEGG: cef:CE1235 hypothetical protein YP_642763.1 KEGG: mbo:Mb0944c putative transposase YP_642765.1 KEGG: sma:SAV7567 putative transcriptional regulatory protein YP_642769.1 KEGG: mbo:Mb1824 conserved hypothetical pro-rich protease YP_642776.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: dde:Dde_1789 phosphoadenosine phosphosulfate reductase, putative YP_642778.1 KEGG: mbo:Mb1942c hypothetical protein YP_642781.1 PFAM: ATPase associated with various cellular activities, AAA_3 ATPase associated with various cellular activities, AAA_5; KEGG: sco:SCO1306 hypothetical protein YP_642782.1 KEGG: sco:SCO1305 hypothetical protein YP_642783.1 KEGG: ade:Adeh_0323 hypothetical protein YP_642784.1 KEGG: sco:SCO2810 hypothetical protein YP_642785.1 KEGG: mbo:Mb2731c hypothetical protein YP_642789.1 KEGG: efa:EFB0026 hypothetical protein