-- dump date 20140619_151056 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 243243000001 SEQ_END SEQ_END NC_008595.1 5475491 5475491 DR NC_008595.1; contig end 5475491..5475491 Mycobacterium avium 104 YP_879304.1 CDS dnaA NC_008595.1 33 1529 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 33..1529 Mycobacterium avium 104 4529107 YP_879305.1 CDS dnaN NC_008595.1 2150 3298 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 2150..3298 Mycobacterium avium 104 4527507 YP_879306.1 CDS recF NC_008595.1 3299 4456 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 3299..4456 Mycobacterium avium 104 4528659 YP_879307.1 CDS MAV_0004 NC_008595.1 4453 4998 D identified by match to protein family HMM PF05258; hypothetical protein 4453..4998 Mycobacterium avium 104 4529300 YP_879308.1 CDS gyrB NC_008595.1 5257 7290 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 5257..7290 Mycobacterium avium 104 4530129 YP_879309.1 CDS gyrA NC_008595.1 7302 9821 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 7302..9821 Mycobacterium avium 104 4527270 YP_879310.1 CDS MAV_0007 NC_008595.1 9924 10787 D hypothetical protein 9924..10787 Mycobacterium avium 104 4529185 YP_879311.1 CDS MAV_0009 NC_008595.1 11157 11735 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(11157..11735) Mycobacterium avium 104 4525587 YP_879312.1 CDS MAV_0011 NC_008595.1 11932 13146 D identified by match to protein family HMM PF00067; cytochrome P450 11932..13146 Mycobacterium avium 104 4525909 YP_879313.1 CDS MAV_0012 NC_008595.1 13148 13582 R hypothetical protein complement(13148..13582) Mycobacterium avium 104 4525601 YP_879314.1 CDS MAV_0013 NC_008595.1 13691 14221 D identified by match to protein family HMM PF00160; peptidyl-prolyl cis-trans isomerase B 13691..14221 Mycobacterium avium 104 4529441 YP_879315.1 CDS MAV_0014 NC_008595.1 14233 14514 R hypothetical protein complement(14233..14514) Mycobacterium avium 104 4530331 YP_879316.1 CDS MAV_0015 NC_008595.1 14814 15095 R integral membrane protein involved in inhibition of the Z-ring formation; septation inhibitor protein complement(14814..15095) Mycobacterium avium 104 4527479 YP_879317.1 CDS MAV_0016 NC_008595.1 15226 15969 D identified by match to protein family HMM PF05949; hypothetical protein 15226..15969 Mycobacterium avium 104 4526922 YP_879318.1 CDS MAV_0018 NC_008595.1 16018 16704 D aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity; para-aminobenzoate synthase component II 16018..16704 Mycobacterium avium 104 4529494 YP_879319.1 CDS MAV_0017 NC_008595.1 16682 18562 R identified by match to protein family HMM PF00069; match to protein family HMM PF03793; serine/threonine protein kinase complement(16682..18562) Mycobacterium avium 104 4527772 YP_879320.1 CDS MAV_0019 NC_008595.1 18559 19824 R identified by match to protein family HMM PF00069; serine/threonine protein kinase complement(18559..19824) Mycobacterium avium 104 4526319 YP_879321.1 CDS MAV_0020 NC_008595.1 19839 21317 R identified by match to protein family HMM PF00905; PbpA protein complement(19839..21317) Mycobacterium avium 104 4526921 YP_879322.1 CDS MAV_0021 NC_008595.1 21314 22723 R identified by match to protein family HMM PF01098; cell cycle protein, FtsW/RodA/SpoVE family protein complement(21314..22723) Mycobacterium avium 104 4525603 YP_879323.1 CDS MAV_0022 NC_008595.1 22720 24219 R identified by match to protein family HMM PF00481; protein phosphatase 2C complement(22720..24219) Mycobacterium avium 104 4526186 YP_879324.1 CDS MAV_0023 NC_008595.1 24284 24682 R identified by match to protein family HMM PF00498; FHA domain-containing protein complement(24284..24682) Mycobacterium avium 104 4527764 YP_879325.1 CDS MAV_0024 NC_008595.1 24876 26513 R identified by match to protein family HMM PF00498; hypothetical protein complement(24876..26513) Mycobacterium avium 104 4529856 YP_879326.1 CDS MAV_0026 NC_008595.1 27020 27457 D hypothetical protein 27020..27457 Mycobacterium avium 104 4525919 YP_879327.1 CDS MAV_0027 NC_008595.1 27478 27849 R hypothetical protein complement(27478..27849) Mycobacterium avium 104 4526294 YP_879328.1 CDS MAV_0028 NC_008595.1 27880 28383 R hypothetical protein complement(27880..28383) Mycobacterium avium 104 4527559 YP_879329.1 CDS MAV_0029 NC_008595.1 28598 28861 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 28598..28861 Mycobacterium avium 104 4526469 YP_879330.1 CDS MAV_0030 NC_008595.1 28858 30414 D converts medium- to long-chain aliphatic fatty acids into acyl adenylate; involved in mycobactin synthesis; long-chain-fatty-acid--[acyl-carrier-protein] ligase 28858..30414 Mycobacterium avium 104 4527673 YP_879331.1 CDS MAV_0031 NC_008595.1 30569 32470 D hypothetical protein 30569..32470 Mycobacterium avium 104 4527580 YP_879332.1 CDS MAV_0032 NC_008595.1 32692 32946 D hypothetical protein 32692..32946 Mycobacterium avium 104 4528687 YP_879333.1 CDS MAV_0033 NC_008595.1 33419 34693 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 33419..34693 Mycobacterium avium 104 4525591 YP_879334.1 CDS MAV_0034 NC_008595.1 34806 36131 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(34806..36131) Mycobacterium avium 104 4527529 YP_879335.1 CDS MAV_0035 NC_008595.1 36248 37522 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(36248..37522) Mycobacterium avium 104 4525851 YP_879336.1 CDS MAV_0036 NC_008595.1 37715 38959 R identified by match to protein family HMM PF01844; match to protein family HMM PF02720; hypothetical protein complement(37715..38959) Mycobacterium avium 104 4528262 YP_879337.1 CDS MAV_0037 NC_008595.1 39014 39343 R hypothetical protein complement(39014..39343) Mycobacterium avium 104 4525745 YP_879338.1 CDS MAV_0038 NC_008595.1 39330 40322 R identified by match to protein family HMM PF02678; match to protein family HMM PF05726; hypothetical protein complement(39330..40322) Mycobacterium avium 104 4527342 YP_879339.1 CDS MAV_0039 NC_008595.1 40327 41709 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(40327..41709) Mycobacterium avium 104 4526957 YP_879340.1 CDS MAV_0040 NC_008595.1 41803 42219 R identified by match to protein family HMM PF02467; transcription factor WhiB family protein complement(41803..42219) Mycobacterium avium 104 4527852 YP_879341.1 CDS MAV_0041 NC_008595.1 42362 43150 D identified by match to protein family HMM PF01381; hypothetical protein 42362..43150 Mycobacterium avium 104 4525534 YP_879342.1 CDS MAV_0042 NC_008595.1 43147 43974 D identified by match to protein family HMM PF00877; NLP/P60 family protein 43147..43974 Mycobacterium avium 104 4528100 YP_879343.1 CDS MAV_0043 NC_008595.1 44023 44385 D hypothetical protein 44023..44385 Mycobacterium avium 104 4526272 YP_879344.1 CDS MAV_0044 NC_008595.1 44501 45952 D hypothetical protein 44501..45952 Mycobacterium avium 104 4530087 YP_879345.1 CDS MAV_0045 NC_008595.1 46003 46320 D hypothetical protein 46003..46320 Mycobacterium avium 104 4530105 YP_879346.1 CDS MAV_0046 NC_008595.1 46395 46628 D hypothetical protein 46395..46628 Mycobacterium avium 104 4526049 YP_879347.1 CDS MAV_0047 NC_008595.1 46662 46805 R hypothetical protein complement(46662..46805) Mycobacterium avium 104 4527127 YP_879348.1 CDS MAV_0048 NC_008595.1 46888 48576 D hypothetical protein 46888..48576 Mycobacterium avium 104 4526149 YP_879349.1 CDS MAV_0049 NC_008595.1 48627 48950 D hypothetical protein 48627..48950 Mycobacterium avium 104 4529810 YP_879350.1 CDS MAV_0050 NC_008595.1 49093 49866 R identified by match to protein family HMM TIGR03083; match to protein family HMM TIGR03084; hypothetical protein complement(49093..49866) Mycobacterium avium 104 4528768 YP_879351.1 CDS MAV_0051 NC_008595.1 49924 51210 R identified by match to protein family HMM PF07690; transporter, major facilitator family protein complement(49924..51210) Mycobacterium avium 104 4526645 YP_879352.1 CDS MAV_0052 NC_008595.1 51341 51946 D identified by match to protein family HMM PF02622; hypothetical protein 51341..51946 Mycobacterium avium 104 4526599 YP_879353.1 CDS MAV_0053 NC_008595.1 51962 52303 R hypothetical protein complement(51962..52303) Mycobacterium avium 104 4528578 YP_879354.1 CDS MAV_0054 NC_008595.1 52359 53459 R proline-rich 28 kDa antigen complement(52359..53459) Mycobacterium avium 104 4530541 YP_879355.1 CDS leuS NC_008595.1 53575 56553 D leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 53575..56553 Mycobacterium avium 104 4526376 YP_879356.1 CDS MAV_0056 NC_008595.1 56560 57231 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase complement(56560..57231) Mycobacterium avium 104 4529117 YP_879357.1 CDS MAV_0057 NC_008595.1 57290 57793 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(57290..57793) Mycobacterium avium 104 4528459 YP_879358.1 CDS MAV_0058 NC_008595.1 57860 58606 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(57860..58606) Mycobacterium avium 104 4530464 YP_879359.1 CDS MAV_0059 NC_008595.1 58603 60399 R identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter permease complement(58603..60399) Mycobacterium avium 104 4528610 YP_879360.1 CDS MAV_0060 NC_008595.1 60462 61202 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(60462..61202) Mycobacterium avium 104 4528970 YP_879361.1 CDS MAV_0061 NC_008595.1 61321 62100 R MmcI protein complement(61321..62100) Mycobacterium avium 104 4528912 YP_879362.1 CDS MAV_0062 NC_008595.1 62117 63031 R identified by match to protein family HMM PF00561; alpha/beta hydrolase complement(62117..63031) Mycobacterium avium 104 4528948 YP_879363.1 CDS MAV_0063 NC_008595.1 63055 64269 R hypothetical protein complement(63055..64269) Mycobacterium avium 104 4527615 YP_879364.1 CDS MAV_0064 NC_008595.1 64266 65069 R identified by match to protein family HMM PF01261; AP endonuclease, family protein 2 complement(64266..65069) Mycobacterium avium 104 4526971 YP_879365.1 CDS MAV_0065 NC_008595.1 65071 66240 R hypothetical protein complement(65071..66240) Mycobacterium avium 104 4526663 YP_879366.1 CDS MAV_0066 NC_008595.1 66237 67364 R identified by match to protein family HMM PF00296; hypothetical protein complement(66237..67364) Mycobacterium avium 104 4530588 YP_879367.1 CDS MAV_0067 NC_008595.1 67496 68602 R identified by match to protein family HMM PF01658; match to protein family HMM PF07994; myo-inositol-1-phosphate synthase complement(67496..68602) Mycobacterium avium 104 4525570 YP_879368.1 CDS MAV_0068 NC_008595.1 68662 69204 R identified by match to protein family HMM PF03551; PadR family transcriptional regulator complement(68662..69204) Mycobacterium avium 104 4526011 YP_879369.1 CDS MAV_0069 NC_008595.1 69351 70235 R identified by match to protein family HMM PF08044; hypothetical protein complement(69351..70235) Mycobacterium avium 104 4528891 YP_879370.1 CDS MAV_0070 NC_008595.1 70351 70794 D hypothetical protein 70351..70794 Mycobacterium avium 104 4529071 YP_879371.1 CDS MAV_0071 NC_008595.1 70791 73424 D identified by match to protein family HMM PF00905; match to protein family HMM PF00912; transglycosylase 70791..73424 Mycobacterium avium 104 4530302 YP_879372.1 CDS MAV_0072 NC_008595.1 73421 75058 D hypothetical protein 73421..75058 Mycobacterium avium 104 4527081 YP_879373.1 CDS MAV_0073 NC_008595.1 75055 75696 D identified by match to protein family HMM PF01965; DJ-1/PfpI family protein 75055..75696 Mycobacterium avium 104 4529242 YP_879374.1 CDS rpsF NC_008595.1 75831 76121 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 75831..76121 Mycobacterium avium 104 4529851 YP_879375.1 CDS rpsR NC_008595.1 76788 77042 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 76788..77042 Mycobacterium avium 104 4526627 YP_879376.1 CDS rplI NC_008595.1 77073 77531 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 77073..77531 Mycobacterium avium 104 4527712 YP_879377.1 CDS MAV_0078 NC_008595.1 77682 78008 R hypothetical protein complement(77682..78008) Mycobacterium avium 104 4525925 YP_879378.1 CDS MAV_0079 NC_008595.1 78063 80450 D identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR01443; replicative DNA helicase 78063..80450 Mycobacterium avium 104 4527745 YP_879379.1 CDS MAV_0080 NC_008595.1 80591 81478 R identified by match to protein family HMM PF01553; acyltransferase domain-containing protein complement(80591..81478) Mycobacterium avium 104 4529906 YP_879380.1 CDS MAV_0081 NC_008595.1 81564 82373 R hypothetical protein complement(81564..82373) Mycobacterium avium 104 4526570 YP_879381.1 CDS MAV_0082 NC_008595.1 82456 83025 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 82456..83025 Mycobacterium avium 104 4529623 YP_879382.1 CDS MAV_0084 NC_008595.1 84930 87863 D identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; transport protein MmpL4 84930..87863 Mycobacterium avium 104 4528750 YP_879383.1 CDS MAV_0085 NC_008595.1 88122 89186 D hypothetical protein 88122..89186 Mycobacterium avium 104 4529981 YP_879384.1 CDS MAV_0086 NC_008595.1 89269 89544 D hypothetical protein 89269..89544 Mycobacterium avium 104 4530753 YP_879385.1 CDS MAV_0087 NC_008595.1 89564 90304 D identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 89564..90304 Mycobacterium avium 104 4527408 YP_879386.1 CDS MAV_0088 NC_008595.1 90333 90968 R hypothetical protein complement(90333..90968) Mycobacterium avium 104 4529852 YP_879387.1 CDS MAV_0089 NC_008595.1 91195 92631 D identified by match to protein family HMM PF01565; FAD binding domain-containing protein 91195..92631 Mycobacterium avium 104 4529292 YP_879388.1 CDS MAV_0090 NC_008595.1 92758 92877 D hypothetical protein 92758..92877 Mycobacterium avium 104 4528280 YP_879389.1 CDS MAV_0092 NC_008595.1 93019 93696 D identified by match to protein family HMM PF00027; match to protein family HMM PF00325; Crp/Fnr family transcriptional regulator protein 93019..93696 Mycobacterium avium 104 4528849 YP_879390.1 CDS MAV_0091 NC_008595.1 93693 94136 R identified by match to protein family HMM PF00903; glyoxalase complement(93693..94136) Mycobacterium avium 104 4530652 YP_879391.1 CDS MAV_0093 NC_008595.1 94157 95089 R identified by match to protein family HMM PF00561; alpha/beta hydrolase complement(94157..95089) Mycobacterium avium 104 4527244 YP_879392.1 CDS MAV_0094 NC_008595.1 95180 96031 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(95180..96031) Mycobacterium avium 104 4526851 YP_879393.1 CDS MAV_0095 NC_008595.1 96201 97118 D identified by match to protein family HMM PF00892; hypothetical protein 96201..97118 Mycobacterium avium 104 4525498 YP_879394.1 CDS MAV_0097 NC_008595.1 97888 98454 D identified by match to protein family HMM PF00583; phosphinothricin N-acetyltransferase 97888..98454 Mycobacterium avium 104 4526893 YP_879395.1 CDS MAV_0098 NC_008595.1 98467 99156 R hypothetical protein complement(98467..99156) Mycobacterium avium 104 4530690 YP_879396.1 CDS MAV_0099 NC_008595.1 99147 99749 R hypothetical protein complement(99147..99749) Mycobacterium avium 104 4529193 YP_879397.1 CDS MAV_0101 NC_008595.1 100937 101794 D identified by match to protein family HMM PF02405; ABC transporter transmembrane protein 100937..101794 Mycobacterium avium 104 4526964 YP_879398.1 CDS MAV_0102 NC_008595.1 101795 103351 D identified by match to protein family HMM PF02470; mce related protein 101795..103351 Mycobacterium avium 104 4529230 YP_879399.1 CDS MAV_0103 NC_008595.1 103354 104427 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 103354..104427 Mycobacterium avium 104 4526078 YP_879400.1 CDS MAV_0104 NC_008595.1 104420 105466 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 104420..105466 Mycobacterium avium 104 4529839 YP_879401.1 CDS MAV_0105 NC_008595.1 105463 106578 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 105463..106578 Mycobacterium avium 104 4527843 YP_879402.1 CDS MAV_0106 NC_008595.1 106581 107813 D identified by match to protein family HMM PF02470; mce related protein 106581..107813 Mycobacterium avium 104 4527059 YP_879403.1 CDS MAV_0107 NC_008595.1 107810 109060 D identified by match to protein family HMM PF02470; mce related protein 107810..109060 Mycobacterium avium 104 4527748 YP_879404.1 CDS MAV_0108 NC_008595.1 109092 109688 D hypothetical protein 109092..109688 Mycobacterium avium 104 4527958 YP_879405.1 CDS MAV_0109 NC_008595.1 109702 110487 D hypothetical protein 109702..110487 Mycobacterium avium 104 4528169 YP_879406.1 CDS MAV_0110 NC_008595.1 110650 111882 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 110650..111882 Mycobacterium avium 104 4528252 YP_879407.1 CDS MAV_0111 NC_008595.1 112090 112314 D hypothetical protein 112090..112314 Mycobacterium avium 104 4528393 YP_879408.1 CDS MAV_0112 NC_008595.1 112326 112670 D hypothetical protein 112326..112670 Mycobacterium avium 104 4528362 YP_879409.1 CDS MAV_0113 NC_008595.1 112726 112893 R hypothetical protein complement(112726..112893) Mycobacterium avium 104 4527514 YP_879410.1 CDS MAV_0114 NC_008595.1 113006 113794 R hypothetical protein complement(113006..113794) Mycobacterium avium 104 4525559 YP_879411.1 CDS MAV_0115 NC_008595.1 113791 114186 R hypothetical protein complement(113791..114186) Mycobacterium avium 104 4527932 YP_879412.1 CDS MAV_0116 NC_008595.1 114285 114845 D hypothetical protein 114285..114845 Mycobacterium avium 104 4527325 YP_879413.1 CDS MAV_0117 NC_008595.1 114858 115163 D identified by match to protein family HMM PF00934; PE family protein 114858..115163 Mycobacterium avium 104 4529299 YP_879414.1 CDS MAV_0118 NC_008595.1 115166 116839 D identified by match to protein family HMM PF00823; PPE family protein 115166..116839 Mycobacterium avium 104 4527134 YP_879415.1 CDS MAV_0119 NC_008595.1 116861 117556 R identified by match to protein family HMM PF05724; thiopurine S-methyltransferase (tpmt) superfamily protein complement(116861..117556) Mycobacterium avium 104 4530392 YP_879416.1 CDS MAV_0120 NC_008595.1 117698 118120 D identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 117698..118120 Mycobacterium avium 104 4526486 YP_879417.1 CDS MAV_0121 NC_008595.1 118377 119885 D identified by match to protein family HMM PF00860; match to protein family HMM PF00916; carbonate dehydratase 118377..119885 Mycobacterium avium 104 4530123 YP_879418.1 CDS MAV_0122 NC_008595.1 119919 120776 R identified by match to protein family HMM PF00296; hypothetical protein complement(119919..120776) Mycobacterium avium 104 4527806 YP_879419.1 CDS MAV_0123 NC_008595.1 120847 121824 D identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase 120847..121824 Mycobacterium avium 104 4525678 YP_879420.1 CDS MAV_0124 NC_008595.1 121922 122347 D hypothetical protein 121922..122347 Mycobacterium avium 104 4528678 YP_879421.1 CDS MAV_0125 NC_008595.1 122354 122461 R hypothetical protein complement(122354..122461) Mycobacterium avium 104 4529155 YP_879422.1 CDS MAV_0126 NC_008595.1 122484 123839 R identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; bifunctional wax ester synthase/acyl-CoA diacylglycerol acyltransferase complement(122484..123839) Mycobacterium avium 104 4525649 YP_879423.1 CDS MAV_0127 NC_008595.1 123960 124226 R PhoY2 protein complement(123960..124226) Mycobacterium avium 104 4527277 YP_879424.1 CDS MAV_0129 NC_008595.1 126283 126858 R hypothetical protein complement(126283..126858) Mycobacterium avium 104 4530150 YP_879425.1 CDS MAV_0130 NC_008595.1 127072 127956 D identified by match to protein family HMM PF02353; cyclopropane-fatty-acyl-phospholipid synthase 1 127072..127956 Mycobacterium avium 104 4530383 YP_879426.1 CDS MAV_0131 NC_008595.1 127981 128124 R hypothetical protein complement(127981..128124) Mycobacterium avium 104 4528623 YP_879427.1 CDS MAV_0132 NC_008595.1 128159 128512 D identified by match to protein family HMM PF00903; glyoxalase 128159..128512 Mycobacterium avium 104 4530446 YP_879428.1 CDS MAV_0133 NC_008595.1 128545 128811 R hypothetical protein complement(128545..128811) Mycobacterium avium 104 4529525 YP_879429.1 CDS MAV_0134 NC_008595.1 128808 129701 R hypothetical protein complement(128808..129701) Mycobacterium avium 104 4526322 YP_879430.1 CDS MAV_0135 NC_008595.1 129710 130324 R identified by match to protein family HMM PF03551; PadR family transcriptional regulator complement(129710..130324) Mycobacterium avium 104 4527692 YP_879431.1 CDS MAV_0136 NC_008595.1 130383 130868 D hypothetical protein 130383..130868 Mycobacterium avium 104 4526862 YP_879432.1 CDS MAV_0137 NC_008595.1 130874 131917 D identified by match to protein family HMM PF00296; oxidoreductase 130874..131917 Mycobacterium avium 104 4525935 YP_879433.1 CDS MAV_0138 NC_008595.1 131951 133168 R identified by match to protein family HMM PF07690; transporter, major facilitator family protein complement(131951..133168) Mycobacterium avium 104 4526170 YP_879434.1 CDS MAV_0139 NC_008595.1 133335 133616 D hypothetical protein 133335..133616 Mycobacterium avium 104 4526502 YP_879435.1 CDS MAV_0140 NC_008595.1 133761 134489 D identified by match to protein family HMM PF00005; nitrate/sulfonate/bicarbonate ABC transporter ATPase 133761..134489 Mycobacterium avium 104 4525553 YP_879436.1 CDS MAV_0141 NC_008595.1 134486 135451 D identified by match to protein family HMM TIGR01728; sulfonate binding protein 134486..135451 Mycobacterium avium 104 4529231 YP_879437.1 CDS MAV_0143 NC_008595.1 135514 136215 D identified by match to protein family HMM PF00528; aliphatic sulfonates ABC transporter permease 135514..136215 Mycobacterium avium 104 4528961 YP_879438.1 CDS MAV_0142 NC_008595.1 136212 137165 R identified by match to protein family HMM PF01266; FAD dependent oxidoreductase complement(136212..137165) Mycobacterium avium 104 4525949 YP_879439.1 CDS MAV_0144 NC_008595.1 137165 138382 R identified by match to protein family HMM PF00583; hypothetical protein complement(137165..138382) Mycobacterium avium 104 4530178 YP_879440.1 CDS MAV_0145 NC_008595.1 138439 139650 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(138439..139650) Mycobacterium avium 104 4525514 YP_879441.1 CDS MAV_0146 NC_008595.1 139647 140294 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(139647..140294) Mycobacterium avium 104 4525980 YP_879442.1 CDS MAV_0147 NC_008595.1 140441 141769 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 140441..141769 Mycobacterium avium 104 4525636 YP_879443.1 CDS MAV_0148 NC_008595.1 141877 142659 D identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 141877..142659 Mycobacterium avium 104 4527412 YP_879444.1 CDS MAV_0149 NC_008595.1 142659 143237 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 142659..143237 Mycobacterium avium 104 4526840 YP_879445.1 CDS MAV_0150 NC_008595.1 143254 143652 D identified by match to protein family HMM PF00903; glyoxalase 143254..143652 Mycobacterium avium 104 4530796 YP_879446.1 CDS MAV_0151 NC_008595.1 143926 144237 D PE family protein 143926..144237 Mycobacterium avium 104 4527802 YP_879447.1 CDS MAV_0153 NC_008595.1 145552 145866 D hypothetical protein 145552..145866 Mycobacterium avium 104 4526252 YP_879448.1 CDS MAV_0154 NC_008595.1 145913 146200 D hypothetical protein 145913..146200 Mycobacterium avium 104 4529791 YP_879449.1 CDS MAV_0155 NC_008595.1 146305 147135 D hypothetical protein 146305..147135 Mycobacterium avium 104 4528408 YP_879450.1 CDS MAV_0156 NC_008595.1 147365 148288 D hypothetical protein 147365..148288 Mycobacterium avium 104 4526135 YP_879451.1 CDS snm NC_008595.1 148384 149814 D identified by match to protein family HMM PF04600; match to protein family HMM TIGR02958; secretion protein Snm4 148384..149814 Mycobacterium avium 104 4528224 YP_879452.1 CDS MAV_0158 NC_008595.1 149799 151457 D identified by match to protein family HMM PF00082; subtilase 149799..151457 Mycobacterium avium 104 4529278 YP_879453.1 CDS MAV_0159 NC_008595.1 151454 153040 D hypothetical protein 151454..153040 Mycobacterium avium 104 4529948 YP_879454.1 CDS MAV_0160 NC_008595.1 153067 154908 D identified by match to protein family HMM PF00004; ATPase AAA 153067..154908 Mycobacterium avium 104 4525698 YP_879455.1 CDS MAV_0161 NC_008595.1 154922 155362 R identified by match to protein family HMM TIGR00026; hypothetical protein complement(154922..155362) Mycobacterium avium 104 4525815 YP_879456.1 CDS MAV_0162 NC_008595.1 155364 156224 R identified by match to protein family HMM PF05368; hypothetical protein complement(155364..156224) Mycobacterium avium 104 4527344 YP_879457.1 CDS sigI NC_008595.1 156337 157194 D member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigI 156337..157194 Mycobacterium avium 104 4527169 YP_879458.1 CDS MAV_0163 NC_008595.1 157191 158342 R hypothetical protein complement(157191..158342) Mycobacterium avium 104 4528652 YP_879459.1 CDS MAV_0165 NC_008595.1 158806 158961 R hypothetical protein complement(158806..158961) Mycobacterium avium 104 4526793 YP_879460.1 CDS MAV_0166 NC_008595.1 158956 163545 D identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898; ferredoxin-dependent glutamate synthase 1 158956..163545 Mycobacterium avium 104 4530098 YP_879461.1 CDS gltD NC_008595.1 163538 165013 D glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 163538..165013 Mycobacterium avium 104 4530289 YP_879462.1 CDS MAV_0168 NC_008595.1 165167 165307 D hypothetical protein 165167..165307 Mycobacterium avium 104 4530558 YP_879463.1 CDS MAV_0169 NC_008595.1 165375 166226 R identified by match to protein family HMM PF00296; hypothetical protein complement(165375..166226) Mycobacterium avium 104 4527453 YP_879464.1 CDS MAV_0170 NC_008595.1 166278 166718 D hypothetical protein 166278..166718 Mycobacterium avium 104 4527478 YP_879465.1 CDS MAV_0171 NC_008595.1 166797 167801 D identified by match to protein family HMM PF02811; hypothetical protein 166797..167801 Mycobacterium avium 104 4529345 YP_879466.1 CDS MAV_0172 NC_008595.1 167808 169010 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(167808..169010) Mycobacterium avium 104 4528317 YP_879467.1 CDS MAV_0173 NC_008595.1 169040 169681 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(169040..169681) Mycobacterium avium 104 4527812 YP_879468.1 CDS MAV_0175 NC_008595.1 169807 171228 D monooxygenase, flavin-binding family protein 169807..171228 Mycobacterium avium 104 4525887 YP_879469.1 CDS MAV_0174 NC_008595.1 171225 171710 R regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA complement(171225..171710) Mycobacterium avium 104 4527327 YP_879470.1 CDS MAV_0176 NC_008595.1 171719 172129 R hypothetical protein complement(171719..172129) Mycobacterium avium 104 4525800 YP_879471.1 CDS MAV_0177 NC_008595.1 172226 172732 R identified by match to protein family HMM PF04234; copper resistance protein CopC complement(172226..172732) Mycobacterium avium 104 4527035 YP_879472.1 CDS MAV_0178 NC_008595.1 172729 173361 R identified by match to protein family HMM PF07987; nuclear export factor GLE1 family protein complement(172729..173361) Mycobacterium avium 104 4529818 YP_879473.1 CDS MAV_0179 NC_008595.1 173367 174023 R hypothetical protein complement(173367..174023) Mycobacterium avium 104 4527146 YP_879474.1 CDS MAV_0180 NC_008595.1 174170 174568 R hypothetical protein complement(174170..174568) Mycobacterium avium 104 4528310 YP_879475.1 CDS MAV_0181 NC_008595.1 174992 175456 R hypothetical protein complement(174992..175456) Mycobacterium avium 104 4527847 YP_879476.1 CDS MAV_0182 NC_008595.1 175683 176306 R identified by match to protein family HMM PF00081; match to protein family HMM PF02777; [Mn]-superoxide dismutase complement(175683..176306) Mycobacterium avium 104 4527443 YP_879477.1 CDS MAV_0183 NC_008595.1 176467 176622 R hypothetical protein complement(176467..176622) Mycobacterium avium 104 4530729 YP_879478.1 CDS MAV_0184 NC_008595.1 177234 178055 D hypothetical protein 177234..178055 Mycobacterium avium 104 4526357 YP_879479.1 CDS MAV_0186 NC_008595.1 178060 178878 D identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase 178060..178878 Mycobacterium avium 104 4529941 YP_879480.1 CDS MAV_0185 NC_008595.1 178875 179828 R identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; transcriptional regulator complement(178875..179828) Mycobacterium avium 104 4527182 YP_879481.1 CDS MAV_0187 NC_008595.1 180134 180928 R hypothetical protein complement(180134..180928) Mycobacterium avium 104 4530634 YP_879482.1 CDS MAV_0188 NC_008595.1 181019 181966 D catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase 181019..181966 Mycobacterium avium 104 4527988 YP_879483.1 CDS MAV_0189 NC_008595.1 181963 182658 D identified by match to protein family HMM PF00300; phosphoglycerate mutase 181963..182658 Mycobacterium avium 104 4525968 YP_879484.1 CDS MAV_0190 NC_008595.1 182668 182826 R hypothetical protein complement(182668..182826) Mycobacterium avium 104 4530581 YP_879485.1 CDS MAV_0191 NC_008595.1 182914 183258 R identified by match to protein family HMM PF06262; hypothetical protein complement(182914..183258) Mycobacterium avium 104 4525500 YP_879486.1 CDS MAV_0192 NC_008595.1 183270 184616 R hypothetical protein complement(183270..184616) Mycobacterium avium 104 4528663 YP_879487.1 CDS serS NC_008595.1 184726 186003 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 184726..186003 Mycobacterium avium 104 4526977 YP_879488.1 CDS MAV_0193 NC_008595.1 186000 186749 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(186000..186749) Mycobacterium avium 104 4527381 YP_879489.1 CDS MAV_0196 NC_008595.1 186819 187400 D hypothetical protein 186819..187400 Mycobacterium avium 104 4529565 YP_879490.1 CDS MAV_0195 NC_008595.1 187397 187882 R hypothetical protein complement(187397..187882) Mycobacterium avium 104 4527170 YP_879491.1 CDS MAV_0197 NC_008595.1 187952 188590 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 187952..188590 Mycobacterium avium 104 4527784 YP_879492.1 CDS MAV_0198 NC_008595.1 188639 190213 D identified by match to protein family HMM PF01266; FAD dependent oxidoreductase, putative 188639..190213 Mycobacterium avium 104 4529751 YP_879493.1 CDS MAV_0199 NC_008595.1 190215 190550 R hypothetical protein complement(190215..190550) Mycobacterium avium 104 4530554 YP_879494.1 CDS MAV_0200 NC_008595.1 190547 192085 R identified by match to protein family HMM PF00355; Rieske 2Fe-2S family protein complement(190547..192085) Mycobacterium avium 104 4529017 YP_879495.1 CDS MAV_0201 NC_008595.1 192146 192289 R hypothetical protein complement(192146..192289) Mycobacterium avium 104 4529136 YP_879496.1 CDS MAV_0202 NC_008595.1 192316 193083 D identified by match to protein family HMM PF01553; acyltransferase 192316..193083 Mycobacterium avium 104 4530706 YP_879497.1 CDS MAV_0203 NC_008595.1 193090 193869 D identified by match to protein family HMM PF01553; acyltransferase 193090..193869 Mycobacterium avium 104 4530065 YP_879498.1 CDS MAV_0204 NC_008595.1 193883 194668 D identified by match to protein family HMM PF01553; acyltransferase 193883..194668 Mycobacterium avium 104 4527163 YP_879499.1 CDS MAV_0205 NC_008595.1 194697 195512 D identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; hypothetical protein 194697..195512 Mycobacterium avium 104 4527753 YP_879500.1 CDS MAV_0206 NC_008595.1 195539 197167 R identified by match to protein family HMM PF01510; N-acetylmuramoyl-L-alanine amidase complement(195539..197167) Mycobacterium avium 104 4527936 YP_879501.1 CDS MAV_0207 NC_008595.1 197302 198348 R Erp protein complement(197302..198348) Mycobacterium avium 104 4526683 YP_879502.1 CDS glf NC_008595.1 198603 199811 D identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031; UDP-galactopyranose mutase 198603..199811 Mycobacterium avium 104 4527092 YP_879503.1 CDS MAV_0209 NC_008595.1 199871 201748 D bifunctional udp-galactofuranosyl transferase glft 199871..201748 Mycobacterium avium 104 4530676 YP_879504.1 CDS MAV_0210 NC_008595.1 201828 202280 D identified by match to protein family HMM PF01569; PAP2 superfamily protein 201828..202280 Mycobacterium avium 104 4527164 YP_879505.1 CDS MAV_0211 NC_008595.1 202277 203194 D catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate; phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase 202277..203194 Mycobacterium avium 104 4530196 YP_879506.1 CDS MAV_0212 NC_008595.1 203181 205163 D hypothetical protein 203181..205163 Mycobacterium avium 104 4525707 YP_879507.1 CDS MAV_0213 NC_008595.1 205160 205318 D hypothetical protein 205160..205318 Mycobacterium avium 104 4529414 YP_879508.1 CDS MAV_0214 NC_008595.1 205514 206557 D identified by match to protein family HMM PF00756; antigen 85-A 205514..206557 Mycobacterium avium 104 4526156 YP_879509.1 CDS MAV_0215 NC_008595.1 206704 207621 D identified by match to protein family HMM PF00756; antigen 85-C 206704..207621 Mycobacterium avium 104 4528501 YP_879510.1 CDS MAV_0216 NC_008595.1 207786 208796 D identified by match to protein family HMM PF01083; cutinase 207786..208796 Mycobacterium avium 104 4528305 YP_879511.1 CDS MAV_0217 NC_008595.1 209078 210976 D activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 209078..210976 Mycobacterium avium 104 4529267 YP_879512.1 CDS MAV_0218 NC_008595.1 210988 216363 D identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801; polyketide synthase 210988..216363 Mycobacterium avium 104 4530734 YP_879513.1 CDS MAV_0220 NC_008595.1 216363 217937 D identified by match to protein family HMM PF01039; propionyl-CoA carboxylase beta chain 216363..217937 Mycobacterium avium 104 4526220 YP_879514.1 CDS MAV_0219 NC_008595.1 217934 218773 R identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein complement(217934..218773) Mycobacterium avium 104 4530740 YP_879515.1 CDS MAV_0221 NC_008595.1 218828 219634 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(218828..219634) Mycobacterium avium 104 4528918 YP_879516.1 CDS MAV_0222 NC_008595.1 219658 221427 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(219658..221427) Mycobacterium avium 104 4528530 YP_879517.1 CDS MAV_0223 NC_008595.1 221438 221953 R hypothetical protein complement(221438..221953) Mycobacterium avium 104 4526637 YP_879518.1 CDS MAV_0225 NC_008595.1 225293 228574 R arabinosyltransferase C complement(225293..228574) Mycobacterium avium 104 4529545 YP_879519.1 CDS MAV_0226 NC_008595.1 228797 229951 D identified by match to protein family HMM PF00486; match to protein family HMM PF00498; match to protein family HMM PF03704; EmbR protein 228797..229951 Mycobacterium avium 104 4529475 YP_879520.1 CDS MAV_0227 NC_008595.1 229955 230578 R identified by match to protein family HMM TIGR03083; hypothetical protein complement(229955..230578) Mycobacterium avium 104 4527527 YP_879521.1 CDS MAV_0228 NC_008595.1 230761 230973 D hypothetical protein 230761..230973 Mycobacterium avium 104 4530549 YP_879522.1 CDS MAV_0229 NC_008595.1 231032 234190 R identified by match to protein family HMM PF04602; arabinosyltransferase A complement(231032..234190) Mycobacterium avium 104 4529552 YP_879523.1 CDS MAV_0230 NC_008595.1 234314 236362 R hypothetical protein complement(234314..236362) Mycobacterium avium 104 4529502 YP_879524.1 CDS MAV_0231 NC_008595.1 236365 237129 R identified by match to protein family HMM PF00106; short chain dehydrogenase complement(236365..237129) Mycobacterium avium 104 4529129 YP_879525.1 CDS MAV_0232 NC_008595.1 237130 238530 R identified by match to protein family HMM PF01565; oxidoreductase, FAD-binding complement(237130..238530) Mycobacterium avium 104 4527319 YP_879526.1 CDS MAV_0233 NC_008595.1 238563 238967 R identified by match to protein family HMM PF04138; membrane protein complement(238563..238967) Mycobacterium avium 104 4530027 YP_879527.1 CDS MAV_0234 NC_008595.1 238978 239454 R Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; nucleoside diphosphate kinase regulator complement(238978..239454) Mycobacterium avium 104 4530368 YP_879528.1 CDS MAV_0235 NC_008595.1 239896 240783 R identified by match to protein family HMM PF02668; taurine catabolism dioxygenase TauD/TfdA complement(239896..240783) Mycobacterium avium 104 4530179 YP_879529.1 CDS MAV_0236 NC_008595.1 240808 241638 R identified by match to protein family HMM PF01061; O-antigen ABC transporter permease complement(240808..241638) Mycobacterium avium 104 4530376 YP_879530.1 CDS MAV_0237 NC_008595.1 241635 242549 R identified by match to protein family HMM PF00535; glycosyl transferase complement(241635..242549) Mycobacterium avium 104 4526876 YP_879531.1 CDS MAV_0238 NC_008595.1 242546 243307 R identified by match to protein family HMM PF00005; O-antigen export system ATP-binding protein RfbB complement(242546..243307) Mycobacterium avium 104 4525987 YP_879532.1 CDS MAV_0239 NC_008595.1 243368 243877 R hypothetical protein complement(243368..243877) Mycobacterium avium 104 4528514 YP_879533.1 CDS MAV_0241 NC_008595.1 245990 247186 D identified by match to protein family HMM PF00266; match to protein family HMM TIGR01976; cysteine desulfurase 245990..247186 Mycobacterium avium 104 4529915 YP_879534.1 CDS MAV_0242 NC_008595.1 247191 248171 R identified by match to protein family HMM PF00107; match to protein family HMM TIGR02824; quinone oxidoreductase complement(247191..248171) Mycobacterium avium 104 4529167 YP_879535.1 CDS MAV_0244 NC_008595.1 248295 249413 R hypothetical protein complement(248295..249413) Mycobacterium avium 104 4526797 YP_879536.1 CDS MAV_0245 NC_008595.1 249454 249645 R hypothetical protein complement(249454..249645) Mycobacterium avium 104 4528703 YP_879537.1 CDS MAV_0246 NC_008595.1 249674 250918 R identified by match to protein family HMM PF00144; beta-lactamase complement(249674..250918) Mycobacterium avium 104 4527766 YP_879538.1 CDS MAV_0247 NC_008595.1 250938 251762 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(250938..251762) Mycobacterium avium 104 4528769 YP_879539.1 CDS MAV_0248 NC_008595.1 251777 252373 D identified by match to protein family HMM TIGR03083; match to protein family HMM TIGR03086; hypothetical protein 251777..252373 Mycobacterium avium 104 4529391 YP_879540.1 CDS MAV_0249 NC_008595.1 252454 252915 R hypothetical protein complement(252454..252915) Mycobacterium avium 104 4529151 YP_879541.1 CDS hisC NC_008595.1 252926 253993 R identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141; aminotransferase complement(252926..253993) Mycobacterium avium 104 4525854 YP_879542.1 CDS MAV_0253 NC_008595.1 254394 255593 R identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase complement(254394..255593) Mycobacterium avium 104 4527552 YP_879543.1 CDS MAV_0254 NC_008595.1 255751 256011 D identified by match to protein family HMM TIGR01764; DNA-binding protein 255751..256011 Mycobacterium avium 104 4527910 YP_879544.1 CDS MAV_0255 NC_008595.1 256081 256689 R hypothetical protein complement(256081..256689) Mycobacterium avium 104 4530662 YP_879545.1 CDS MAV_0256 NC_008595.1 256769 256915 R hypothetical protein complement(256769..256915) Mycobacterium avium 104 4526157 YP_879546.1 CDS MAV_0257 NC_008595.1 256997 257146 R hypothetical protein complement(256997..257146) Mycobacterium avium 104 4530442 YP_879547.1 CDS MAV_0258 NC_008595.1 257171 257470 R hypothetical protein complement(257171..257470) Mycobacterium avium 104 4527743 YP_879548.1 CDS MAV_0259 NC_008595.1 257485 258138 R hypothetical protein complement(257485..258138) Mycobacterium avium 104 4530288 YP_879549.1 CDS MAV_0260 NC_008595.1 258151 258717 R hypothetical protein complement(258151..258717) Mycobacterium avium 104 4526333 YP_879550.1 CDS MAV_0261 NC_008595.1 258789 259973 R hypothetical protein complement(258789..259973) Mycobacterium avium 104 4528923 YP_879551.1 CDS MAV_0262 NC_008595.1 260039 260374 R chromosome partitioning protein complement(260039..260374) Mycobacterium avium 104 4526887 YP_879552.1 CDS MAV_0263 NC_008595.1 260406 261287 R hypothetical protein complement(260406..261287) Mycobacterium avium 104 4529102 YP_879553.1 CDS MAV_0264 NC_008595.1 261316 263352 R identified by match to protein family HMM PF01580; ftsk/SpoIIIE family protein, putative complement(261316..263352) Mycobacterium avium 104 4528132 YP_879554.1 CDS MAV_0265 NC_008595.1 263356 264168 R hypothetical protein complement(263356..264168) Mycobacterium avium 104 4527517 YP_879555.1 CDS MAV_0266 NC_008595.1 264511 264810 D identified by match to protein family HMM TIGR01764; DNA binding domain-containing protein 264511..264810 Mycobacterium avium 104 4528669 YP_879556.1 CDS MAV_0267 NC_008595.1 264807 265031 D hypothetical protein 264807..265031 Mycobacterium avium 104 4526080 YP_879557.1 CDS MAV_0268 NC_008595.1 265325 268261 D hypothetical protein 265325..268261 Mycobacterium avium 104 4527133 YP_879558.1 CDS MAV_0269 NC_008595.1 268746 269240 D hypothetical protein 268746..269240 Mycobacterium avium 104 4528615 YP_879559.1 CDS MAV_0270 NC_008595.1 269297 269698 D identified by match to protein family HMM PF00583; acetyltransferase, gnat family protein 269297..269698 Mycobacterium avium 104 4527332 YP_879560.1 CDS MAV_0271 NC_008595.1 269790 270074 D identified by match to protein family HMM PF01381; DNA-binding protein 269790..270074 Mycobacterium avium 104 4528336 YP_879561.1 CDS MAV_0272 NC_008595.1 270077 270274 R hypothetical protein complement(270077..270274) Mycobacterium avium 104 4528924 YP_879562.1 CDS MAV_0273 NC_008595.1 270362 270778 R hypothetical protein complement(270362..270778) Mycobacterium avium 104 4525855 YP_879563.1 CDS MAV_0274 NC_008595.1 270792 273383 R hypothetical protein complement(270792..273383) Mycobacterium avium 104 4529488 YP_879564.1 CDS MAV_0275 NC_008595.1 273383 275371 R identified by match to protein family HMM PF01555; adenine specific DNA methylase Mod complement(273383..275371) Mycobacterium avium 104 4529378 YP_879565.1 CDS MAV_0276 NC_008595.1 275691 276152 D hypothetical protein 275691..276152 Mycobacterium avium 104 4528196 YP_879566.1 CDS MAV_0277 NC_008595.1 276155 276499 D hypothetical protein 276155..276499 Mycobacterium avium 104 4526994 YP_879567.1 CDS MAV_0278 NC_008595.1 276509 277969 R hypothetical protein complement(276509..277969) Mycobacterium avium 104 4529229 YP_879568.1 CDS MAV_0279 NC_008595.1 278017 278811 R identified by match to protein family HMM PF00089; trypsin domain-containing protein complement(278017..278811) Mycobacterium avium 104 4528445 YP_879569.1 CDS MAV_0280 NC_008595.1 278816 278962 D hypothetical protein 278816..278962 Mycobacterium avium 104 4529877 YP_879570.1 CDS MAV_0281 NC_008595.1 278976 279179 R hypothetical protein complement(278976..279179) Mycobacterium avium 104 4528327 YP_879571.1 CDS MAV_0282 NC_008595.1 280305 280772 D identified by match to protein family HMM TIGR01764; DNA binding domain-containing protein 280305..280772 Mycobacterium avium 104 4526822 YP_879572.1 CDS MAV_0283 NC_008595.1 281053 281202 D hypothetical protein 281053..281202 Mycobacterium avium 104 4530603 YP_879573.1 CDS MAV_0284 NC_008595.1 281199 283997 D hypothetical protein 281199..283997 Mycobacterium avium 104 4528715 YP_879574.1 CDS MAV_0285 NC_008595.1 284492 285316 R hypothetical protein complement(284492..285316) Mycobacterium avium 104 4526121 YP_879575.1 CDS MAV_0286 NC_008595.1 285508 285789 D carnitine racemase, putative 285508..285789 Mycobacterium avium 104 4526316 YP_879576.1 CDS MAV_0287 NC_008595.1 285974 286585 D gp6 protein 285974..286585 Mycobacterium avium 104 4530693 YP_879577.1 CDS MAV_0288 NC_008595.1 286609 286875 D identified by match to protein family HMM PF00462; glutaredoxin 286609..286875 Mycobacterium avium 104 4527536 YP_879578.1 CDS MAV_0289 NC_008595.1 286872 287255 D hypothetical protein 286872..287255 Mycobacterium avium 104 4528880 YP_879579.1 CDS MAV_0290 NC_008595.1 287283 289778 D hypothetical protein 287283..289778 Mycobacterium avium 104 4525903 YP_879580.1 CDS MAV_0291 NC_008595.1 289849 289971 R hypothetical protein complement(289849..289971) Mycobacterium avium 104 4530793 YP_879581.1 CDS MAV_0292 NC_008595.1 290359 291492 D identified by match to protein family HMM PF00589; integrase 290359..291492 Mycobacterium avium 104 4525911 YP_879582.1 CDS MAV_0293 NC_008595.1 291493 291816 R hypothetical protein complement(291493..291816) Mycobacterium avium 104 4526782 YP_879583.1 CDS MAV_0294 NC_008595.1 291813 291992 R hypothetical protein complement(291813..291992) Mycobacterium avium 104 4528464 YP_879584.1 CDS MAV_0295 NC_008595.1 292102 293013 D hypothetical protein 292102..293013 Mycobacterium avium 104 4529606 YP_879585.1 CDS MAV_0296 NC_008595.1 293069 293629 D hypothetical protein 293069..293629 Mycobacterium avium 104 4528524 YP_879586.1 CDS MAV_0297 NC_008595.1 293626 293958 D hypothetical protein 293626..293958 Mycobacterium avium 104 4529206 YP_879587.1 CDS MAV_0298 NC_008595.1 293984 294226 D hypothetical protein 293984..294226 Mycobacterium avium 104 4526419 YP_879588.1 CDS MAV_0299 NC_008595.1 294476 294892 D hypothetical protein 294476..294892 Mycobacterium avium 104 4526938 YP_879589.1 CDS MAV_0300 NC_008595.1 294941 296005 R identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein, putative complement(294941..296005) Mycobacterium avium 104 4530774 YP_879590.1 CDS MAV_0301 NC_008595.1 296096 297040 D identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein 296096..297040 Mycobacterium avium 104 4525958 YP_879591.1 CDS MAV_0302 NC_008595.1 297208 297435 D hypothetical protein 297208..297435 Mycobacterium avium 104 4526125 YP_879592.1 CDS MAV_0303 NC_008595.1 297457 297612 D hypothetical protein 297457..297612 Mycobacterium avium 104 4529177 YP_879593.1 CDS MAV_0304 NC_008595.1 297688 298428 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 297688..298428 Mycobacterium avium 104 4527914 YP_879594.1 CDS MAV_0305 NC_008595.1 298475 299965 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 298475..299965 Mycobacterium avium 104 4527371 YP_879595.1 CDS MAV_0306 NC_008595.1 299967 300452 R identified by match to protein family HMM PF05481; lipoprotein LpqH complement(299967..300452) Mycobacterium avium 104 4528294 YP_879596.1 CDS MAV_0307 NC_008595.1 300594 302468 D identified by match to protein family HMM PF00753; metallo-beta-lactamase 300594..302468 Mycobacterium avium 104 4526453 YP_879597.1 CDS MAV_0308 NC_008595.1 302478 303446 R identified by match to protein family HMM PF00107; alcohol dehydrogenase, zinc-binding complement(302478..303446) Mycobacterium avium 104 4528792 YP_879598.1 CDS MAV_0309 NC_008595.1 303446 304060 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(303446..304060) Mycobacterium avium 104 4528153 YP_879599.1 CDS MAV_0311 NC_008595.1 305354 306118 R identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase SDR complement(305354..306118) Mycobacterium avium 104 4526202 YP_879600.1 CDS MAV_0312 NC_008595.1 306120 307178 R identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein complement(306120..307178) Mycobacterium avium 104 4528096 YP_879601.1 CDS MAV_0313 NC_008595.1 307234 307917 R identified by match to protein family HMM PF05724; thiopurine S-methyltransferase (tpmt) superfamily protein complement(307234..307917) Mycobacterium avium 104 4529602 YP_879602.1 CDS MAV_0314 NC_008595.1 307994 308602 D identified by match to protein family HMM PF00300; phosphoglycerate mutase, putative 307994..308602 Mycobacterium avium 104 4529381 YP_879603.1 CDS MAV_0316 NC_008595.1 308637 309689 D identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein 308637..309689 Mycobacterium avium 104 4527210 YP_879604.1 CDS MAV_0315 NC_008595.1 309686 310036 R hypothetical protein complement(309686..310036) Mycobacterium avium 104 4525863 YP_879605.1 CDS MAV_0317 NC_008595.1 310174 311082 D identified by match to protein family HMM PF04069; quaternary amine ABC transporter substrate-binding protein 310174..311082 Mycobacterium avium 104 4528400 YP_879606.1 CDS MAV_0318 NC_008595.1 311084 312178 D identified by match to protein family HMM PF00005; amino acid ABC transporter ATP-binding protein 311084..312178 Mycobacterium avium 104 4528371 YP_879607.1 CDS MAV_0319 NC_008595.1 312178 312864 D identified by match to protein family HMM PF00528; ABC transporter permease 312178..312864 Mycobacterium avium 104 4527973 YP_879608.1 CDS MAV_0320 NC_008595.1 312861 313577 D identified by match to protein family HMM PF00528; ABC transporter permease 312861..313577 Mycobacterium avium 104 4525700 YP_879609.1 CDS MAV_0322 NC_008595.1 313677 314177 D identified by match to protein family HMM PF06475; hypothetical protein 313677..314177 Mycobacterium avium 104 4526000 YP_879610.1 CDS MAV_0321 NC_008595.1 314140 315084 R catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase complement(314140..315084) Mycobacterium avium 104 4527768 YP_879611.1 CDS MAV_0323 NC_008595.1 315227 315748 D hypothetical protein 315227..315748 Mycobacterium avium 104 4528390 YP_879612.1 CDS MAV_0324 NC_008595.1 315745 316203 D identified by match to protein family HMM PF00383; cytidine and deoxycytidylate deaminase 315745..316203 Mycobacterium avium 104 4527879 YP_879613.1 CDS MAV_0326 NC_008595.1 316495 317412 D identified by match to protein family HMM PF01341; endoglucanase A 316495..317412 Mycobacterium avium 104 4528380 YP_879614.1 CDS MAV_0327 NC_008595.1 317505 317978 D identified by match to protein family HMM PF00188; hypothetical protein 317505..317978 Mycobacterium avium 104 4526550 YP_879615.1 CDS MAV_0328 NC_008595.1 318572 318904 D hypothetical protein 318572..318904 Mycobacterium avium 104 4529436 YP_879616.1 CDS MAV_0329 NC_008595.1 318957 320231 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 318957..320231 Mycobacterium avium 104 4527389 YP_879617.1 CDS MAV_0330 NC_008595.1 322189 322707 R hypothetical protein complement(322189..322707) Mycobacterium avium 104 4528518 YP_879618.1 CDS MAV_0331 NC_008595.1 322745 324382 R hypothetical protein complement(322745..324382) Mycobacterium avium 104 4529967 YP_879619.1 CDS MAV_0332 NC_008595.1 324946 326079 R hypothetical protein complement(324946..326079) Mycobacterium avium 104 4529651 YP_879620.1 CDS MAV_0333 NC_008595.1 326265 326402 D hypothetical protein 326265..326402 Mycobacterium avium 104 4525838 YP_879621.1 CDS MAV_0334 NC_008595.1 326533 326793 D hypothetical protein 326533..326793 Mycobacterium avium 104 4528848 YP_879622.1 CDS MAV_0335 NC_008595.1 326801 328066 D hypothetical protein 326801..328066 Mycobacterium avium 104 4528791 YP_879623.1 CDS MAV_0336 NC_008595.1 328078 329316 D identified by match to protein family HMM PF00753; metallo-beta-lactamase 328078..329316 Mycobacterium avium 104 4529263 YP_879624.1 CDS MAV_0337 NC_008595.1 329313 329795 D hypothetical protein 329313..329795 Mycobacterium avium 104 4527644 YP_879625.1 CDS MAV_0338 NC_008595.1 329809 330783 D identified by match to protein family HMM PF00296; hypothetical protein 329809..330783 Mycobacterium avium 104 4529104 YP_879626.1 CDS MAV_0339 NC_008595.1 330795 331451 R identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator complement(330795..331451) Mycobacterium avium 104 4528049 YP_879627.1 CDS MAV_0340 NC_008595.1 331513 332868 D nitrilotriacetate monooxygenase component A 331513..332868 Mycobacterium avium 104 4526104 YP_879628.1 CDS MAV_0341 NC_008595.1 332861 334045 D identified by match to protein family HMM PF02515; caib/baif family protein 332861..334045 Mycobacterium avium 104 4525848 YP_879629.1 CDS MAV_0343 NC_008595.1 334063 334989 D identified by match to protein family HMM PF03328; malyl-CoA lyase 334063..334989 Mycobacterium avium 104 4526378 YP_879630.1 CDS pyc NC_008595.1 334986 338369 R biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase complement(334986..338369) Mycobacterium avium 104 4529987 YP_879631.1 CDS MAV_0344 NC_008595.1 338375 339502 R catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; citrate synthase complement(338375..339502) Mycobacterium avium 104 4528955 YP_879632.1 CDS prpB NC_008595.1 339514 340416 R identified by match to protein family HMM TIGR02317; methylisocitrate lyase complement(339514..340416) Mycobacterium avium 104 4525589 YP_879633.1 CDS MAV_0346 NC_008595.1 340416 341921 R identified by match to protein family HMM PF03972; 2-methylcitrate dehydratase 2 complement(340416..341921) Mycobacterium avium 104 4529632 YP_879634.1 CDS MAV_0348 NC_008595.1 342041 343465 D identified by match to protein family HMM PF01381; match to protein family HMM PF06114; XRE family transcriptional regulator 342041..343465 Mycobacterium avium 104 4528708 YP_879635.1 CDS MAV_0347 NC_008595.1 343455 344333 R identified by match to protein family HMM PF00294; kinase, PfkB family protein complement(343455..344333) Mycobacterium avium 104 4527102 YP_879636.1 CDS MAV_0349 NC_008595.1 344443 345432 D identified by similarity to GB:BAB40320.1; match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase 344443..345432 Mycobacterium avium 104 4528121 YP_879637.1 CDS MAV_0350 NC_008595.1 345439 346035 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(345439..346035) Mycobacterium avium 104 4529160 YP_879638.1 CDS MAV_0351 NC_008595.1 346032 346805 R identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase SDR complement(346032..346805) Mycobacterium avium 104 4526974 YP_879639.1 CDS MAV_0352 NC_008595.1 346802 347011 R lactoylglutathione lyase, putative complement(346802..347011) Mycobacterium avium 104 4525970 YP_879640.1 CDS MAV_0353 NC_008595.1 347008 348087 R hypothetical protein complement(347008..348087) Mycobacterium avium 104 4526492 YP_879641.1 CDS MAV_0354 NC_008595.1 348205 349062 D identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 348205..349062 Mycobacterium avium 104 4527551 YP_879642.1 CDS MAV_0355 NC_008595.1 349101 350456 D identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; bifunctional wax ester synthase/acyl-coadiacylglycerol acyltransferase 349101..350456 Mycobacterium avium 104 4530247 YP_879643.1 CDS MAV_0356 NC_008595.1 350463 350948 D identified by match to protein family HMM PF00293; nudix hydrolase 350463..350948 Mycobacterium avium 104 4527337 YP_879644.1 CDS MAV_0357 NC_008595.1 350950 351855 D identified by match to protein family HMM PF00561; haloalkane dehalogenase 350950..351855 Mycobacterium avium 104 4528123 YP_879645.1 CDS MAV_0358 NC_008595.1 351892 353127 D identified by match to protein family HMM PF00067; cytochrome P450 351892..353127 Mycobacterium avium 104 4527666 YP_879646.1 CDS MAV_0359 NC_008595.1 353273 353635 R hypothetical protein complement(353273..353635) Mycobacterium avium 104 4527083 YP_879647.1 CDS MAV_0361 NC_008595.1 353728 354075 D hypothetical protein 353728..354075 Mycobacterium avium 104 4530151 YP_879648.1 CDS ligC NC_008595.1 354042 355136 R catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth; ATP-dependent DNA ligase complement(354042..355136) Mycobacterium avium 104 4525884 YP_879649.1 CDS ligD NC_008595.1 355178 356206 D identified by match to protein family HMM TIGR02778; DNA polymerase LigD polymerase subunit 355178..356206 Mycobacterium avium 104 4526254 YP_879650.1 CDS MAV_0363 NC_008595.1 356245 356403 D hypothetical protein 356245..356403 Mycobacterium avium 104 4525739 YP_879651.1 CDS MAV_0365 NC_008595.1 356608 358620 D hypothetical protein 356608..358620 Mycobacterium avium 104 4526565 YP_879652.1 CDS MAV_0364 NC_008595.1 358561 359616 R hypothetical protein complement(358561..359616) Mycobacterium avium 104 4529902 YP_879653.1 CDS MAV_0366 NC_008595.1 359623 360825 D identified by match to protein family HMM PF00067; cytochrome P450 superfamily protein 359623..360825 Mycobacterium avium 104 4528053 YP_879654.1 CDS MAV_0367 NC_008595.1 360830 361405 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(360830..361405) Mycobacterium avium 104 4526651 YP_879655.1 CDS MAV_0369 NC_008595.1 362407 363102 R identified by match to protein family HMM PF01083; serine esterase cutinase complement(362407..363102) Mycobacterium avium 104 4527780 YP_879656.1 CDS MAV_0370 NC_008595.1 363163 363315 D hypothetical protein 363163..363315 Mycobacterium avium 104 4525905 YP_879657.1 CDS dapB NC_008595.1 363331 364398 R identified by match to protein family HMM PF01113; dihydrodipicolinate reductase complement(363331..364398) Mycobacterium avium 104 4530210 YP_879658.1 CDS MAV_0372 NC_008595.1 364437 365573 R hypothetical protein complement(364437..365573) Mycobacterium avium 104 4529125 YP_879659.1 CDS MAV_0373 NC_008595.1 365570 366904 R hypothetical protein complement(365570..366904) Mycobacterium avium 104 4526803 YP_879660.1 CDS MAV_0374 NC_008595.1 366949 367281 D hypothetical protein 366949..367281 Mycobacterium avium 104 4529007 YP_879661.1 CDS MAV_0375 NC_008595.1 367284 368666 R hypothetical protein complement(367284..368666) Mycobacterium avium 104 4528582 YP_879662.1 CDS MAV_0376 NC_008595.1 368663 370351 R hypothetical protein complement(368663..370351) Mycobacterium avium 104 4527535 YP_879663.1 CDS MAV_0377 NC_008595.1 370449 370907 R hypothetical protein complement(370449..370907) Mycobacterium avium 104 4528902 YP_879664.1 CDS MAV_0379 NC_008595.1 371084 371461 D hypothetical protein 371084..371461 Mycobacterium avium 104 4526694 YP_879665.1 CDS MAV_0378 NC_008595.1 371458 372291 R hypothetical protein complement(371458..372291) Mycobacterium avium 104 4525664 YP_879666.1 CDS MAV_0381 NC_008595.1 372870 374156 D aspartate transaminase 372870..374156 Mycobacterium avium 104 4526060 YP_879667.1 CDS MAV_0382 NC_008595.1 374305 376131 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma/tau 374305..376131 Mycobacterium avium 104 4527841 YP_879668.1 CDS MAV_0383 NC_008595.1 376143 377453 R identified by match to protein family HMM PF02353; cyclopropane-fatty-acyl-phospholipid synthase complement(376143..377453) Mycobacterium avium 104 4530520 YP_879669.1 CDS MAV_0384 NC_008595.1 377450 378874 R identified by match to protein family HMM PF01565; FAD/FMN-containing dehydrogenase complement(377450..378874) Mycobacterium avium 104 4527907 YP_879670.1 CDS MAV_0386 NC_008595.1 378923 379360 D KanY protein 378923..379360 Mycobacterium avium 104 4526976 YP_879671.1 CDS MAV_0385 NC_008595.1 379357 380094 R identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase complement(379357..380094) Mycobacterium avium 104 4527637 YP_879672.1 CDS MAV_0387 NC_008595.1 380253 380579 D identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103; hypothetical protein 380253..380579 Mycobacterium avium 104 4526759 YP_879673.1 CDS recR NC_008595.1 380605 381216 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 380605..381216 Mycobacterium avium 104 4528908 YP_879674.1 CDS MAV_0389 NC_008595.1 381231 381938 R identified by match to protein family HMM PF07685; CobB/CobQ-like glutamine amidotransferase complement(381231..381938) Mycobacterium avium 104 4530667 YP_879675.1 CDS MAV_0390 NC_008595.1 381931 383181 R mur ligase complement(381931..383181) Mycobacterium avium 104 4530476 YP_879676.1 CDS MAV_0391 NC_008595.1 383431 384420 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 383431..384420 Mycobacterium avium 104 4528910 YP_879677.1 CDS leuA NC_008595.1 384421 386220 R identified by match to protein family HMM PF00682; match to protein family HMM TIGR00970; 2-isopropylmalate synthase complement(384421..386220) Mycobacterium avium 104 4529256 YP_879678.1 CDS MAV_0393 NC_008595.1 386513 387778 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 386513..387778 Mycobacterium avium 104 4527198 YP_879679.1 CDS asd NC_008595.1 387779 388813 D catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 387779..388813 Mycobacterium avium 104 4526764 YP_879680.1 CDS MAV_0395 NC_008595.1 388821 389969 D hypothetical protein 388821..389969 Mycobacterium avium 104 4527952 YP_879681.1 CDS MAV_0396 NC_008595.1 390145 390579 D hypothetical protein 390145..390579 Mycobacterium avium 104 4530721 YP_879682.1 CDS MAV_0397 NC_008595.1 390722 391240 D hypothetical protein 390722..391240 Mycobacterium avium 104 4529807 YP_879683.1 CDS MAV_0398 NC_008595.1 391308 391970 D hypothetical protein 391308..391970 Mycobacterium avium 104 4529331 YP_879684.1 CDS MAV_0399 NC_008595.1 392176 393486 D identified by match to protein family HMM PF04107; glutamate--cysteine ligase 392176..393486 Mycobacterium avium 104 4529021 YP_879685.1 CDS MAV_0400 NC_008595.1 393483 394784 D identified by match to protein family HMM PF03781; hypothetical protein 393483..394784 Mycobacterium avium 104 4529451 YP_879686.1 CDS MAV_0401 NC_008595.1 394784 395482 D hypothetical protein 394784..395482 Mycobacterium avium 104 4526432 YP_879687.1 CDS MAV_0402 NC_008595.1 395479 396447 D hypothetical protein 395479..396447 Mycobacterium avium 104 4525929 YP_879688.1 CDS MAV_0403 NC_008595.1 396444 397589 D identified by match to protein family HMM PF00266; pyridoxal-phosphate-dependent transferase 396444..397589 Mycobacterium avium 104 4530075 YP_879689.1 CDS MAV_0404 NC_008595.1 397593 398273 R identified by match to protein family HMM PF05724; thiopurine S-methyltransferase (tpmt) superfamily protein complement(397593..398273) Mycobacterium avium 104 4527189 YP_879690.1 CDS MAV_0405 NC_008595.1 398284 399756 R CBS domain-containing protein complement(398284..399756) Mycobacterium avium 104 4530414 YP_879691.1 CDS glpK NC_008595.1 399863 401389 D Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 399863..401389 Mycobacterium avium 104 4525663 YP_879692.1 CDS MAV_0407 NC_008595.1 401422 402192 R identified by match to protein family HMM PF03551; PadR family transcriptional regulator complement(401422..402192) Mycobacterium avium 104 4528636 YP_879693.1 CDS MAV_0409 NC_008595.1 402344 402733 D hypothetical protein 402344..402733 Mycobacterium avium 104 4528394 YP_879694.1 CDS MAV_0408 NC_008595.1 402730 403602 R identified by match to protein family HMM PF06271; integral membrane protein complement(402730..403602) Mycobacterium avium 104 4530066 YP_879695.1 CDS MAV_0410 NC_008595.1 403683 404675 D integral membrane protein 403683..404675 Mycobacterium avium 104 4527383 YP_879696.1 CDS MAV_0411 NC_008595.1 404687 406009 R identified by match to protein family HMM PF01882; lipoprotein complement(404687..406009) Mycobacterium avium 104 4530170 YP_879697.1 CDS MAV_0412 NC_008595.1 406006 406989 R identified by match to protein family HMM PF07726; match to protein family HMM PF07728; ATPase complement(406006..406989) Mycobacterium avium 104 4527588 YP_879698.1 CDS MAV_0413 NC_008595.1 406986 408119 R hypothetical protein complement(406986..408119) Mycobacterium avium 104 4525715 YP_879699.1 CDS MAV_0414 NC_008595.1 408119 408772 R hypothetical protein complement(408119..408772) Mycobacterium avium 104 4528632 YP_879700.1 CDS MAV_0415 NC_008595.1 408797 410053 R hypothetical protein complement(408797..410053) Mycobacterium avium 104 4527807 YP_879701.1 CDS MAV_0416 NC_008595.1 410052 410516 D identified by match to protein family HMM PF02637; GatB/Yqey domain-containing protein 410052..410516 Mycobacterium avium 104 4526788 YP_879702.1 CDS MAV_0417 NC_008595.1 410526 412238 R identified by match to protein family HMM PF00009; match to protein family HMM PF03144; elongation factor Tu GTP binding domain-containing protein complement(410526..412238) Mycobacterium avium 104 4528143 YP_879703.1 CDS selA NC_008595.1 412226 413506 R catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase complement(412226..413506) Mycobacterium avium 104 4527653 YP_879704.1 CDS selD NC_008595.1 413668 414660 D identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00476; selenide, water dikinase 413668..414660 Mycobacterium avium 104 4529176 YP_879705.1 CDS MAV_0421 NC_008595.1 414733 415314 D identified by match to protein family HMM PF04879; molybdopterin oxidoreductase Fe4S4 region 414733..415314 Mycobacterium avium 104 4526852 YP_879706.1 CDS MAV_0422 NC_008595.1 415384 418047 D identified by match to protein family HMM PF01568; formate dehydrogenase, alpha subunit 415384..418047 Mycobacterium avium 104 4526752 YP_879707.1 CDS MAV_0423 NC_008595.1 418029 419021 D identified by match to protein family HMM PF00037; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 418029..419021 Mycobacterium avium 104 4527828 YP_879708.1 CDS MAV_0424 NC_008595.1 419018 420103 D identified by match to protein family HMM PF03916; polysulphide reductase 419018..420103 Mycobacterium avium 104 4530272 YP_879709.1 CDS MAV_0425 NC_008595.1 420128 421138 D identified by match to protein family HMM PF00296; dehydrogenase 420128..421138 Mycobacterium avium 104 4529026 YP_879710.1 CDS MAV_0426 NC_008595.1 421176 421718 D identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382; intracellular protease, PfpI family protein 421176..421718 Mycobacterium avium 104 4528957 YP_879711.1 CDS MAV_0427 NC_008595.1 421829 422518 D identified by match to protein family HMM PF01170; match to protein family HMM PF05175; match to protein family HMM TIGR00537; methylase, putative 421829..422518 Mycobacterium avium 104 4526318 YP_879712.1 CDS MAV_0428 NC_008595.1 422532 422672 R hypothetical protein complement(422532..422672) Mycobacterium avium 104 4530552 YP_879713.1 CDS MAV_0429 NC_008595.1 422696 423727 R hypothetical protein complement(422696..423727) Mycobacterium avium 104 4530565 YP_879714.1 CDS MAV_0430 NC_008595.1 423770 425980 R identified by match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF07228; match to protein family HMM TIGR00229; stage II sporulation protein E (SpoIIE) complement(423770..425980) Mycobacterium avium 104 4527781 YP_879715.1 CDS MAV_0431 NC_008595.1 425977 426549 R identified by match to protein family HMM PF07228; stage II sporulation protein E (SpoIIE), putative complement(425977..426549) Mycobacterium avium 104 4530073 YP_879716.1 CDS MAV_0432 NC_008595.1 426596 427006 R identified by match to protein family HMM PF02518; serine/threonine protein kinase complement(426596..427006) Mycobacterium avium 104 4528234 YP_879717.1 CDS MAV_0433 NC_008595.1 426996 427385 R identified by match to protein family HMM PF01740; antagonist protein RsbS complement(426996..427385) Mycobacterium avium 104 4527804 YP_879718.1 CDS MAV_0434 NC_008595.1 427408 428310 R identified by match to protein family HMM PF01740; anti-anti-sigma factor complement(427408..428310) Mycobacterium avium 104 4525531 YP_879719.1 CDS MAV_0435 NC_008595.1 428508 428849 D identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; anti-anti-sigma factor 428508..428849 Mycobacterium avium 104 4525765 YP_879720.1 CDS MAV_0436 NC_008595.1 428894 429403 D hypothetical protein 428894..429403 Mycobacterium avium 104 4527980 YP_879721.1 CDS MAV_0437 NC_008595.1 429414 430046 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; hydrolase complement(429414..430046) Mycobacterium avium 104 4528365 YP_879722.1 CDS MAV_0438 NC_008595.1 430269 430580 D hypothetical protein 430269..430580 Mycobacterium avium 104 4527205 YP_879723.1 CDS MAV_0440 NC_008595.1 431106 431699 D identified by match to protein family HMM PF04471; restriction endonuclease 431106..431699 Mycobacterium avium 104 4525510 YP_879724.1 CDS MAV_0441 NC_008595.1 431749 432438 R identified by match to protein family HMM PF01590; match to protein family HMM PF03861; ANTAR domain-containing protein complement(431749..432438) Mycobacterium avium 104 4530623 YP_879725.1 CDS MAV_0442 NC_008595.1 432641 433252 D identified by match to protein family HMM TIGR03083; match to protein family HMM TIGR03086; hypothetical protein 432641..433252 Mycobacterium avium 104 4530594 YP_879726.1 CDS MAV_0444 NC_008595.1 433405 434508 R identified by match to protein family HMM PF00291; cysteine synthase/cystathionine beta-synthase complement(433405..434508) Mycobacterium avium 104 4527082 YP_879727.1 CDS MAV_0445 NC_008595.1 434505 435518 R identified by match to protein family HMM PF00149; secreted protein complement(434505..435518) Mycobacterium avium 104 4525563 YP_879728.1 CDS MAV_0446 NC_008595.1 435576 437936 R identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM PF03793; transglycosylase complement(435576..437936) Mycobacterium avium 104 4528456 YP_879729.1 CDS MAV_0447 NC_008595.1 438507 438719 D identified by match to protein family HMM PF02467; transcription factor WhiB 438507..438719 Mycobacterium avium 104 4527194 YP_879730.1 CDS MAV_0448 NC_008595.1 438782 439897 R identified by match to protein family HMM PF02374; anion-transporting ATPase complement(438782..439897) Mycobacterium avium 104 4525971 YP_879731.1 CDS MAV_0449 NC_008595.1 439921 440892 R identified by match to protein family HMM PF02374; anion-transporting ATPase complement(439921..440892) Mycobacterium avium 104 4530407 YP_879732.1 CDS MAV_0450 NC_008595.1 441011 441172 D hypothetical protein 441011..441172 Mycobacterium avium 104 4527282 YP_879733.1 CDS MAV_0451 NC_008595.1 441173 441649 D identified by match to protein family HMM PF01042; translation initiation inhibitor 441173..441649 Mycobacterium avium 104 4526536 YP_879734.1 CDS MAV_0452 NC_008595.1 441646 442449 D identified by match to protein family HMM PF00753; metallo-beta-lactamase 441646..442449 Mycobacterium avium 104 4527905 YP_879735.1 CDS MAV_0453 NC_008595.1 442682 443356 R identified by match to protein family HMM PF00027; match to protein family HMM PF00325; Crp/Fnr family transcriptional regulator protein complement(442682..443356) Mycobacterium avium 104 4528931 YP_879736.1 CDS MAV_0454 NC_008595.1 443461 443841 R hypothetical protein complement(443461..443841) Mycobacterium avium 104 4527949 YP_879737.1 CDS nth NC_008595.1 444012 444710 D identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III 444012..444710 Mycobacterium avium 104 4529130 YP_879738.1 CDS MAV_0456 NC_008595.1 444735 445403 D hypothetical protein 444735..445403 Mycobacterium avium 104 4530564 YP_879739.1 CDS MAV_0457 NC_008595.1 445433 446251 D identified by match to protein family HMM PF00293; hydrolase, nudix family protein 445433..446251 Mycobacterium avium 104 4527172 YP_879740.1 CDS MAV_0459 NC_008595.1 446248 447456 D identified by match to protein family HMM PF00089; match to protein family HMM PF02674; serine protease 446248..447456 Mycobacterium avium 104 4526266 YP_879741.1 CDS MAV_0458 NC_008595.1 447449 448414 R identified by match to protein family HMM PF00561; alpha/beta hydrolase complement(447449..448414) Mycobacterium avium 104 4525945 YP_879742.1 CDS MAV_0460 NC_008595.1 448415 448954 R identified by match to protein family HMM PF07332; hypothetical protein complement(448415..448954) Mycobacterium avium 104 4527153 YP_879743.1 CDS MAV_0461 NC_008595.1 449175 449846 D hypothetical protein 449175..449846 Mycobacterium avium 104 4529456 YP_879744.1 CDS acsA NC_008595.1 449938 451890 R Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase complement(449938..451890) Mycobacterium avium 104 4530191 YP_879745.1 CDS MAV_0463 NC_008595.1 452005 452547 D hypothetical protein 452005..452547 Mycobacterium avium 104 4529694 YP_879746.1 CDS MAV_0464 NC_008595.1 452654 454258 D identified by match to protein family HMM PF00496; extracellular solute-binding protein, family protein 5 452654..454258 Mycobacterium avium 104 4527803 YP_879747.1 CDS dppB NC_008595.1 454260 455186 D identified by match to protein family HMM PF00528; ABC transporter permease 454260..455186 Mycobacterium avium 104 4526528 YP_879748.1 CDS dppC NC_008595.1 455179 456054 D identified by match to protein family HMM PF00528; ABC transporter permease 455179..456054 Mycobacterium avium 104 4528975 YP_879749.1 CDS dppD NC_008595.1 456042 457697 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 456042..457697 Mycobacterium avium 104 4527114 YP_879750.1 CDS MAV_0468 NC_008595.1 457714 458445 D hypothetical protein 457714..458445 Mycobacterium avium 104 4529994 YP_879751.1 CDS MAV_0469 NC_008595.1 458911 459768 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; HAD-superfamily protein subfamily protein IB hydrolase complement(458911..459768) Mycobacterium avium 104 4527987 YP_879752.1 CDS MAV_0470 NC_008595.1 460281 461333 D hypothetical protein 460281..461333 Mycobacterium avium 104 4528404 YP_879753.1 CDS MAV_0471 NC_008595.1 461330 462418 D identified by match to protein family HMM PF00437; Type II/IV secretion system protein 461330..462418 Mycobacterium avium 104 4528352 YP_879754.1 CDS MAV_0472 NC_008595.1 462391 462666 D hypothetical protein 462391..462666 Mycobacterium avium 104 4528177 YP_879755.1 CDS MAV_0473 NC_008595.1 462660 463934 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 462660..463934 Mycobacterium avium 104 4528137 YP_879756.1 CDS MAV_0474 NC_008595.1 464148 464795 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(464148..464795) Mycobacterium avium 104 4529611 YP_879757.1 CDS MAV_0475 NC_008595.1 464814 465872 R identified by match to protein family HMM PF04909; amidohydrolase complement(464814..465872) Mycobacterium avium 104 4529484 YP_879758.1 CDS MAV_0476 NC_008595.1 465869 466309 R identified by match to protein family HMM PF01796; hypothetical protein complement(465869..466309) Mycobacterium avium 104 4527894 YP_879759.1 CDS MAV_0477 NC_008595.1 466359 467552 R lipid-transfer protein complement(466359..467552) Mycobacterium avium 104 4526751 YP_879760.1 CDS MAV_0478 NC_008595.1 467549 469909 R identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F complement(467549..469909) Mycobacterium avium 104 4527541 YP_879761.1 CDS MAV_0479 NC_008595.1 470026 470883 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; carveol dehydrogenase 470026..470883 Mycobacterium avium 104 4528638 YP_879762.1 CDS MAV_0480 NC_008595.1 470979 471905 D hypothetical protein 470979..471905 Mycobacterium avium 104 4528173 YP_879763.1 CDS MAV_0481 NC_008595.1 471929 472915 R identified by match to protein family HMM PF04909; amidohydrolase complement(471929..472915) Mycobacterium avium 104 4528586 YP_879764.1 CDS MAV_0482 NC_008595.1 472964 473845 R identified by match to protein family HMM PF00248; oxidoreductase YdbC complement(472964..473845) Mycobacterium avium 104 4528335 YP_879765.1 CDS MAV_0483 NC_008595.1 473857 474210 R identified by match to protein family HMM PF03992; monooxygenase complement(473857..474210) Mycobacterium avium 104 4527671 YP_879766.1 CDS MAV_0484 NC_008595.1 474234 475121 R cyclase complement(474234..475121) Mycobacterium avium 104 4528284 YP_879767.1 CDS MAV_0485 NC_008595.1 475203 475637 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 475203..475637 Mycobacterium avium 104 4526830 YP_879768.1 CDS MAV_0486 NC_008595.1 475656 476009 R hypothetical protein complement(475656..476009) Mycobacterium avium 104 4527358 YP_879769.1 CDS MAV_0487 NC_008595.1 476026 476748 R identified by match to protein family HMM PF01738; dienelactone hydrolase complement(476026..476748) Mycobacterium avium 104 4525656 YP_879770.1 CDS MAV_0488 NC_008595.1 476745 477392 R identified by match to protein family HMM PF00440; transcriptional regulator complement(476745..477392) Mycobacterium avium 104 4530295 YP_879771.1 CDS MAV_0489 NC_008595.1 477488 477916 D identified by match to protein family HMM PF03928; GlcG protein 477488..477916 Mycobacterium avium 104 4526241 YP_879772.1 CDS MAV_0490 NC_008595.1 477949 478800 D identified by match to protein family HMM PF03328; HpcH/HpaI aldolase 477949..478800 Mycobacterium avium 104 4528387 YP_879773.1 CDS MAV_0491 NC_008595.1 478831 479370 D hypothetical protein 478831..479370 Mycobacterium avium 104 4528972 YP_879774.1 CDS MAV_0492 NC_008595.1 479394 480899 D identified by match to protein family HMM PF00135; para-nitrobenzyl esterase 479394..480899 Mycobacterium avium 104 4529781 YP_879775.1 CDS MAV_0493 NC_008595.1 480951 481364 D identified by match to protein family HMM PF07366; hypothetical protein 480951..481364 Mycobacterium avium 104 4526477 YP_879776.1 CDS MAV_0494 NC_008595.1 481425 481814 R hypothetical protein complement(481425..481814) Mycobacterium avium 104 4525879 YP_879777.1 CDS MAV_0496 NC_008595.1 481845 483059 D identified by match to protein family HMM PF01548; match to protein family HMM PF02371; transposase IS116/IS110/IS902 481845..483059 Mycobacterium avium 104 4529958 YP_879778.1 CDS MAV_0497 NC_008595.1 483932 484207 R transposase complement(483932..484207) Mycobacterium avium 104 4527158 YP_879779.1 CDS MAV_0498 NC_008595.1 484191 484646 D ISAfe2, transposase 484191..484646 Mycobacterium avium 104 4529840 YP_879780.1 CDS MAV_0499 NC_008595.1 484989 485357 D hypothetical protein 484989..485357 Mycobacterium avium 104 4529269 YP_879781.1 CDS MAV_0500 NC_008595.1 485366 486772 D hypothetical protein 485366..486772 Mycobacterium avium 104 4528288 YP_879782.1 CDS MAV_0501 NC_008595.1 486787 487305 D hypothetical protein 486787..487305 Mycobacterium avium 104 4528451 YP_879783.1 CDS MAV_0502 NC_008595.1 487350 487658 D hypothetical protein 487350..487658 Mycobacterium avium 104 4526228 YP_879784.1 CDS MAV_0503 NC_008595.1 487796 488134 R transposase complement(487796..488134) Mycobacterium avium 104 4530326 YP_879785.1 CDS MAV_0504 NC_008595.1 488194 490182 R identified by match to protein family HMM PF00589; transposase complement(488194..490182) Mycobacterium avium 104 4529750 YP_879786.1 CDS MAV_0505 NC_008595.1 490409 491614 R identified by match to protein family HMM PF00589; match to protein family HMM PF02899; transposase complement(490409..491614) Mycobacterium avium 104 4526227 YP_879787.1 CDS MAV_0506 NC_008595.1 491628 492851 R identified by match to protein family HMM PF06114; DNA-binding protein complement(491628..492851) Mycobacterium avium 104 4530495 YP_879788.1 CDS MAV_0507 NC_008595.1 492919 493602 R hypothetical protein complement(492919..493602) Mycobacterium avium 104 4526166 YP_879789.1 CDS MAV_0508 NC_008595.1 493805 493978 D TrbB protein 493805..493978 Mycobacterium avium 104 4529350 YP_879790.1 CDS MAV_0509 NC_008595.1 493975 494778 D identified by match to protein family HMM PF00482; type II secretion system protein F 493975..494778 Mycobacterium avium 104 4528888 YP_879791.1 CDS MAV_0510 NC_008595.1 494801 495388 D identified by match to protein family HMM PF00482; type II secretion system protein F 494801..495388 Mycobacterium avium 104 4527740 YP_879792.1 CDS MAV_0511 NC_008595.1 495407 495607 D hypothetical protein 495407..495607 Mycobacterium avium 104 4527473 YP_879793.1 CDS MAV_0512 NC_008595.1 495664 495933 D hypothetical protein 495664..495933 Mycobacterium avium 104 4527257 YP_879794.1 CDS MAV_0514 NC_008595.1 495965 496258 D hypothetical protein 495965..496258 Mycobacterium avium 104 4529753 YP_879795.1 CDS MAV_0513 NC_008595.1 496255 497241 R hypothetical protein complement(496255..497241) Mycobacterium avium 104 4528979 YP_879796.1 CDS MAV_0515 NC_008595.1 497375 499705 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent rna helicase, dead/deah box family protein complement(497375..499705) Mycobacterium avium 104 4525904 YP_879797.1 CDS MAV_0516 NC_008595.1 499954 500157 D identified by match to protein family HMM PF00313; hypothetical protein 499954..500157 Mycobacterium avium 104 4530284 YP_879798.1 CDS MAV_0517 NC_008595.1 500346 500936 D hypothetical protein 500346..500936 Mycobacterium avium 104 4527655 YP_879799.1 CDS topA NC_008595.1 501141 503939 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 501141..503939 Mycobacterium avium 104 4528010 YP_879800.1 CDS MAV_0518 NC_008595.1 503936 505540 R identified by match to protein family HMM PF00211; match to protein family HMM PF00672; adenylate cyclase, family protein 3 complement(503936..505540) Mycobacterium avium 104 4527231 YP_879801.1 CDS MAV_0520 NC_008595.1 505735 506901 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 505735..506901 Mycobacterium avium 104 4525915 YP_879802.1 CDS MAV_0522 NC_008595.1 507099 508841 R hypothetical protein complement(507099..508841) Mycobacterium avium 104 4529796 YP_879803.1 CDS MAV_0524 NC_008595.1 508882 509823 D identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; nucleoside-diphosphate-sugar epimerase 508882..509823 Mycobacterium avium 104 4528088 YP_879804.1 CDS MAV_0523 NC_008595.1 509820 510161 R hypothetical protein complement(509820..510161) Mycobacterium avium 104 4526015 YP_879805.1 CDS MAV_0525 NC_008595.1 510158 510823 R identified by match to protein family HMM PF00535; glycosyl transferase complement(510158..510823) Mycobacterium avium 104 4529183 YP_879806.1 CDS MAV_0526 NC_008595.1 510895 512145 R hypothetical protein complement(510895..512145) Mycobacterium avium 104 4530761 YP_879807.1 CDS MAV_0528 NC_008595.1 512273 513361 D identified by match to protein family HMM PF04332; hypothetical protein 512273..513361 Mycobacterium avium 104 4530724 YP_879808.1 CDS ppa NC_008595.1 513342 513830 R identified by match to protein family HMM PF00719; inorganic pyrophosphatase complement(513342..513830) Mycobacterium avium 104 4527129 YP_879809.1 CDS dacB NC_008595.1 513985 515337 D identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 513985..515337 Mycobacterium avium 104 4530403 YP_879810.1 CDS MAV_0530 NC_008595.1 515334 516407 D hypothetical protein 515334..516407 Mycobacterium avium 104 4527496 YP_879811.1 CDS tilS NC_008595.1 516386 517348 D identified by match to protein family HMM PF01171; match to protein family HMM TIGR02432; tRNA(Ile)-lysidine synthetase 516386..517348 Mycobacterium avium 104 4525731 YP_879812.1 CDS hpt NC_008595.1 517399 518010 D identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase 517399..518010 Mycobacterium avium 104 4525578 YP_879813.1 CDS MAV_0533 NC_008595.1 518018 518767 R identified by match to protein family HMM PF04402; LpqG protein complement(518018..518767) Mycobacterium avium 104 4526363 YP_879814.1 CDS MAV_0534 NC_008595.1 519084 519383 D identified by match to protein family HMM PF00934; PE family protein 519084..519383 Mycobacterium avium 104 4525662 YP_879815.1 CDS MAV_0535 NC_008595.1 519393 520658 D identified by match to protein family HMM PF00823; PPE family protein 519393..520658 Mycobacterium avium 104 4528444 YP_879816.1 CDS MAV_0536 NC_008595.1 520668 522248 R identified by match to protein family HMM PF01844; match to protein family HMM PF02720; hypothetical protein complement(520668..522248) Mycobacterium avium 104 4527192 YP_879817.1 CDS MAV_0537 NC_008595.1 522278 523291 R identified by match to protein family HMM PF00107; zinc-binding dehydrogenase complement(522278..523291) Mycobacterium avium 104 4526652 YP_879818.1 CDS MAV_0538 NC_008595.1 523291 524478 R identified by match to protein family HMM PF00296; limonene 1,2-monooxygenase complement(523291..524478) Mycobacterium avium 104 4528050 YP_879819.1 CDS MAV_0539 NC_008595.1 524475 525404 R identified by match to protein family HMM PF00561; alpha/beta hydrolase complement(524475..525404) Mycobacterium avium 104 4530175 YP_879820.1 CDS MAV_0540 NC_008595.1 525544 525957 D identified by match to protein family HMM PF00903; dioxygenase 525544..525957 Mycobacterium avium 104 4530158 YP_879821.1 CDS MAV_0541 NC_008595.1 526099 526218 D hypothetical protein 526099..526218 Mycobacterium avium 104 4527569 YP_879822.1 CDS hflB NC_008595.1 526345 528744 D identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; ATP-dependent metallopeptidase HflB 526345..528744 Mycobacterium avium 104 4530130 YP_879823.1 CDS folE NC_008595.1 528761 529375 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 528761..529375 Mycobacterium avium 104 4529577 YP_879824.1 CDS folP NC_008595.1 529404 530198 D identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 529404..530198 Mycobacterium avium 104 4530748 YP_879825.1 CDS folB NC_008595.1 530191 530592 D identified by match to protein family HMM PF02152; match to protein family HMM TIGR00525; match to protein family HMM TIGR00526; dihydroneopterin aldolase 530191..530592 Mycobacterium avium 104 4528054 YP_879826.1 CDS folK NC_008595.1 530589 531137 D identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 530589..531137 Mycobacterium avium 104 4530518 YP_879827.1 CDS MAV_0548 NC_008595.1 531137 531613 D hypothetical protein 531137..531613 Mycobacterium avium 104 4526812 YP_879828.1 CDS MAV_0547 NC_008595.1 531610 531816 R hypothetical protein complement(531610..531816) Mycobacterium avium 104 4529313 YP_879829.1 CDS MAV_0549 NC_008595.1 531824 533089 D hypothetical protein 531824..533089 Mycobacterium avium 104 4528391 YP_879830.1 CDS MAV_0550 NC_008595.1 533205 534116 D chalcone/stilbene synthase 533205..534116 Mycobacterium avium 104 4528885 YP_879831.1 CDS panC NC_008595.1 534113 535039 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 534113..535039 Mycobacterium avium 104 4528629 YP_879832.1 CDS panD NC_008595.1 535039 535470 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 535039..535470 Mycobacterium avium 104 4530264 YP_879833.1 CDS MAV_0553 NC_008595.1 535473 536288 D type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 535473..536288 Mycobacterium avium 104 4529546 YP_879834.1 CDS lysS NC_008595.1 536335 537834 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 536335..537834 Mycobacterium avium 104 4526765 YP_879835.1 CDS MAV_0555 NC_008595.1 537990 538316 D Lsr2 protein 537990..538316 Mycobacterium avium 104 4529739 YP_879836.1 CDS MAV_0556 NC_008595.1 538716 541184 D identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; negative regulator of genetic competence ClpC/mecB 538716..541184 Mycobacterium avium 104 4527107 YP_879837.1 CDS MAV_0557 NC_008595.1 541373 541588 D hypothetical protein 541373..541588 Mycobacterium avium 104 4529311 YP_879838.1 CDS MAV_0558 NC_008595.1 541604 542380 D hypothetical protein 541604..542380 Mycobacterium avium 104 4528723 YP_879839.1 CDS MAV_0559 NC_008595.1 542428 542925 D identified by match to protein family HMM PF00300; phosphoglycerate mutase, putative 542428..542925 Mycobacterium avium 104 4526490 YP_879840.1 CDS MAV_0560 NC_008595.1 543119 544558 D identified by match to protein family HMM PF03055; carotenoid oxygenase 543119..544558 Mycobacterium avium 104 4527561 YP_879841.1 CDS MAV_0561 NC_008595.1 544571 545884 R LpqF protein complement(544571..545884) Mycobacterium avium 104 4526310 YP_879842.1 CDS MAV_0562 NC_008595.1 545913 546221 R identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase domain-containing protein complement(545913..546221) Mycobacterium avium 104 4528714 YP_879843.1 CDS MAV_0564 NC_008595.1 546307 547050 D identified by match to protein family HMM PF00561; hydrolase, alpha/beta hydrolase family protein 546307..547050 Mycobacterium avium 104 4526563 YP_879844.1 CDS MAV_0563 NC_008595.1 547033 547944 R identified by match to protein family HMM PF00633; match to protein family HMM PF00730; A/G-specific adenine glycosylase complement(547033..547944) Mycobacterium avium 104 4529904 YP_879845.1 CDS MAV_0565 NC_008595.1 547943 548560 D identified by match to protein family HMM PF00484; carbonic anhydrase 547943..548560 Mycobacterium avium 104 4528220 YP_879846.1 CDS MAV_0566 NC_008595.1 548672 549505 D hypothetical protein 548672..549505 Mycobacterium avium 104 4527697 YP_879847.1 CDS MAV_0567 NC_008595.1 549533 550606 R non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair; DNA integrity scanning protein DisA complement(549533..550606) Mycobacterium avium 104 4530038 YP_879848.1 CDS radA NC_008595.1 550603 551982 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(550603..551982) Mycobacterium avium 104 4526787 YP_879849.1 CDS MAV_0569 NC_008595.1 552077 552643 R LpqE protein complement(552077..552643) Mycobacterium avium 104 4529779 YP_879850.1 CDS MAV_0570 NC_008595.1 552922 553410 D identified by match to protein family HMM PF02559; CarD family transcriptional regulator 552922..553410 Mycobacterium avium 104 4528819 YP_879851.1 CDS ispD NC_008595.1 553445 554134 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 553445..554134 Mycobacterium avium 104 4529428 YP_879852.1 CDS ispF NC_008595.1 554131 554610 D catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 554131..554610 Mycobacterium avium 104 4530535 YP_879853.1 CDS cysS NC_008595.1 554659 556065 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 554659..556065 Mycobacterium avium 104 4526192 YP_879854.1 CDS MAV_0574 NC_008595.1 556066 556995 D identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; RNA methyltransferase, TrmH family protein, group 3 556066..556995 Mycobacterium avium 104 4525604 YP_879855.1 CDS MAV_0576 NC_008595.1 556992 557936 D identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase 556992..557936 Mycobacterium avium 104 4526359 YP_879856.1 CDS MAV_0575 NC_008595.1 557840 559273 R hypothetical protein complement(557840..559273) Mycobacterium avium 104 4528539 YP_879857.1 CDS MAV_0578 NC_008595.1 559452 562085 D identified by match to protein family HMM PF00196; match to protein family HMM PF07721; LuxR family transcriptional regulator 559452..562085 Mycobacterium avium 104 4529344 YP_879858.1 CDS MAV_0577 NC_008595.1 562082 563323 R identified by match to protein family HMM PF02040; match to protein family HMM PF03600; arsenical pump membrane protein complement(562082..563323) Mycobacterium avium 104 4526588 YP_879859.1 CDS MAV_0579 NC_008595.1 563334 564251 R hypothetical protein complement(563334..564251) Mycobacterium avium 104 4528740 YP_879860.1 CDS MAV_0580 NC_008595.1 564251 565009 R identified by match to protein family HMM PF03746; LamB/YcsF family protein complement(564251..565009) Mycobacterium avium 104 4527046 YP_879861.1 CDS MAV_0581 NC_008595.1 565019 565879 R identified by match to protein family HMM PF00950; match to protein family HMM PF02653; Mn2+/Zn2+ ABC transporter permease complement(565019..565879) Mycobacterium avium 104 4530675 YP_879862.1 CDS MAV_0582 NC_008595.1 565879 566700 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(565879..566700) Mycobacterium avium 104 4529955 YP_879863.1 CDS MAV_0583 NC_008595.1 566697 567632 R identified by match to protein family HMM PF01297; periplasmic solute binding protein family protein complement(566697..567632) Mycobacterium avium 104 4529198 YP_879864.1 CDS MAV_0585 NC_008595.1 567755 568834 D identified by match to protein family HMM PF00532; LacI family transcriptional regulator 567755..568834 Mycobacterium avium 104 4526673 YP_879865.1 CDS MAV_0584 NC_008595.1 568831 569424 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(568831..569424) Mycobacterium avium 104 4529977 YP_879866.1 CDS MAV_0587 NC_008595.1 569792 571915 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 569792..571915 Mycobacterium avium 104 4525515 YP_879867.1 CDS MAV_0586 NC_008595.1 571912 572484 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(571912..572484) Mycobacterium avium 104 4525959 YP_879868.1 CDS MAV_0588 NC_008595.1 572569 573450 D identified by match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993; oxidoreductase 572569..573450 Mycobacterium avium 104 4525842 YP_879869.1 CDS MAV_0589 NC_008595.1 573452 573985 R hypothetical protein complement(573452..573985) Mycobacterium avium 104 4530147 YP_879870.1 CDS MAV_0590 NC_008595.1 574032 575126 R identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; oxidoreductase, electron transfer component complement(574032..575126) Mycobacterium avium 104 4526660 YP_879871.1 CDS MAV_0591 NC_008595.1 575339 576523 D identified by match to protein family HMM PF08028; pigment production hydroxylase 575339..576523 Mycobacterium avium 104 4526855 YP_879872.1 CDS MAV_0592 NC_008595.1 576520 577401 D identified by match to protein family HMM PF00561; 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase 576520..577401 Mycobacterium avium 104 4530308 YP_879873.1 CDS MAV_0593 NC_008595.1 577401 578312 D identified by match to protein family HMM PF00903; extradiol ring-cleavage dioxygenase 577401..578312 Mycobacterium avium 104 4529640 YP_879874.1 CDS MAV_0594 NC_008595.1 578315 578878 D identified by match to protein family HMM PF01613; flavin reductase 578315..578878 Mycobacterium avium 104 4528884 YP_879875.1 CDS MAV_0595 NC_008595.1 578904 579734 D identified by match to protein family HMM PF00797; arylamine N-acetyltransferase 578904..579734 Mycobacterium avium 104 4528743 YP_879876.1 CDS MAV_0596 NC_008595.1 579748 580914 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(579748..580914) Mycobacterium avium 104 4529247 YP_879877.1 CDS MAV_0597 NC_008595.1 580911 581870 R identified by match to protein family HMM PF00441; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(580911..581870) Mycobacterium avium 104 4527096 YP_879878.1 CDS MAV_0598 NC_008595.1 581867 582811 R identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(581867..582811) Mycobacterium avium 104 4527986 YP_879879.1 CDS MAV_0599 NC_008595.1 582808 583953 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; acyl-CoA dehydrogenase complement(582808..583953) Mycobacterium avium 104 4529785 YP_879880.1 CDS fadD NC_008595.1 583953 585482 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(583953..585482) Mycobacterium avium 104 4526629 YP_879881.1 CDS MAV_0601 NC_008595.1 585542 586690 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 585542..586690 Mycobacterium avium 104 4527301 YP_879882.1 CDS MAV_0602 NC_008595.1 586687 587475 D identified by match to protein family HMM PF00106; short chain dehydrogenase 586687..587475 Mycobacterium avium 104 4526379 YP_879883.1 CDS MAV_0603 NC_008595.1 587556 588155 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 587556..588155 Mycobacterium avium 104 4530500 YP_879884.1 CDS MAV_0604 NC_008595.1 588171 589331 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 588171..589331 Mycobacterium avium 104 4528006 YP_879885.1 CDS MAV_0605 NC_008595.1 589424 590164 R hypothetical protein complement(589424..590164) Mycobacterium avium 104 4528187 YP_879886.1 CDS MAV_0606 NC_008595.1 590161 590769 R hypothetical protein complement(590161..590769) Mycobacterium avium 104 4526270 YP_879887.1 CDS MAV_0607 NC_008595.1 590889 591965 R identified by similarity to GB:AAF98273.1; match to protein family HMM PF03060; oxidoreductase, 2-nitropropane dioxygenase complement(590889..591965) Mycobacterium avium 104 4526008 YP_879888.1 CDS MAV_0608 NC_008595.1 592012 592755 R coenzyme A transferase, subunit B complement(592012..592755) Mycobacterium avium 104 4529637 YP_879889.1 CDS MAV_0609 NC_008595.1 592752 593633 R identified by match to protein family HMM PF01144; coenzyme A transferase, subunit A complement(592752..593633) Mycobacterium avium 104 4530800 YP_879890.1 CDS MAV_0610 NC_008595.1 593633 594388 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(593633..594388) Mycobacterium avium 104 4526072 YP_879891.1 CDS MAV_0611 NC_008595.1 594511 595245 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase 594511..595245 Mycobacterium avium 104 4526920 YP_879892.1 CDS MAV_0612 NC_008595.1 595260 596165 D identified by match to protein family HMM PF00106; short chain dehydrogenase 595260..596165 Mycobacterium avium 104 4530799 YP_879893.1 CDS MAV_0613 NC_008595.1 596303 596731 R identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; AclJ protein complement(596303..596731) Mycobacterium avium 104 4529596 YP_879894.1 CDS MAV_0614 NC_008595.1 596754 597155 R hypothetical protein complement(596754..597155) Mycobacterium avium 104 4526997 YP_879895.1 CDS MAV_0615 NC_008595.1 597174 598334 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(597174..598334) Mycobacterium avium 104 4529114 YP_879896.1 CDS MAV_0616 NC_008595.1 598494 599744 D identified by match to protein family HMM PF00067; cytochrome P450 124 598494..599744 Mycobacterium avium 104 4526813 YP_879897.1 CDS MAV_0617 NC_008595.1 599746 600834 D identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase 599746..600834 Mycobacterium avium 104 4526120 YP_879898.1 CDS MAV_0618 NC_008595.1 600825 601988 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; acyl-CoA dehydrogenase 600825..601988 Mycobacterium avium 104 4528804 YP_879899.1 CDS MAV_0619 NC_008595.1 601985 602938 D identified by match to protein family HMM PF01796; hypothetical protein 601985..602938 Mycobacterium avium 104 4529656 YP_879900.1 CDS MAV_0620 NC_008595.1 602935 603336 D hypothetical protein 602935..603336 Mycobacterium avium 104 4528465 YP_879901.1 CDS MAV_0621 NC_008595.1 603336 604505 D lipid-transfer protein 603336..604505 Mycobacterium avium 104 4526098 YP_879902.1 CDS MAV_0622 NC_008595.1 604792 605460 D hypothetical protein 604792..605460 Mycobacterium avium 104 4530000 YP_879903.1 CDS MAV_0623 NC_008595.1 605543 606403 R identified by match to protein family HMM PF01575; MaoC like domain-containing protein complement(605543..606403) Mycobacterium avium 104 4528212 YP_879904.2 CDS MAV_0624 NC_008595.1 606405 608087 R initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; 3-ketosteroid-delta-1-dehydrogenase complement(606405..608087) Mycobacterium avium 104 4527887 YP_879905.1 CDS MAV_0625 NC_008595.1 608161 608946 D identified by match to protein family HMM PF01689; 2-keto-4-pentenoate hydratase 608161..608946 Mycobacterium avium 104 4526284 YP_879906.2 CDS MAV_0626 NC_008595.1 608998 609912 D catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase 608998..609912 Mycobacterium avium 104 4528328 YP_879907.1 CDS MAV_0627 NC_008595.1 609909 610967 D catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase 609909..610967 Mycobacterium avium 104 4529645 YP_879908.1 CDS MAV_0628 NC_008595.1 611020 611325 D hypothetical protein 611020..611325 Mycobacterium avium 104 4530660 YP_879909.1 CDS MAV_0629 NC_008595.1 611415 612542 D hypothetical protein 611415..612542 Mycobacterium avium 104 4528785 YP_879910.1 CDS MAV_0630 NC_008595.1 612554 613327 D identified by match to protein family HMM PF00106; short chain dehydrogenase 612554..613327 Mycobacterium avium 104 4527859 YP_879911.1 CDS MAV_0631 NC_008595.1 613324 614469 D hypothetical protein 613324..614469 Mycobacterium avium 104 4529995 YP_879912.1 CDS MAV_0632 NC_008595.1 614482 614919 R hypothetical protein complement(614482..614919) Mycobacterium avium 104 4529618 YP_879913.1 CDS MAV_0633 NC_008595.1 614925 616082 R identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein complement(614925..616082) Mycobacterium avium 104 4529081 YP_879914.1 CDS MAV_0634 NC_008595.1 616209 616733 D carnitine operon protein CaiE 616209..616733 Mycobacterium avium 104 4527881 YP_879915.1 CDS MAV_0635 NC_008595.1 616744 617151 R hypothetical protein complement(616744..617151) Mycobacterium avium 104 4525670 YP_879916.1 CDS MAV_0636 NC_008595.1 617154 618347 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(617154..618347) Mycobacterium avium 104 4526349 YP_879917.1 CDS MAV_0637 NC_008595.1 618347 619411 R lipid-transfer protein complement(618347..619411) Mycobacterium avium 104 4526586 YP_879918.1 CDS MAV_0638 NC_008595.1 619428 620396 R identified by match to protein family HMM PF01796; hypothetical protein complement(619428..620396) Mycobacterium avium 104 4528307 YP_879919.1 CDS MAV_0639 NC_008595.1 620490 621521 D identified by match to protein family HMM PF00296; FMN-dependent monooxygenase 620490..621521 Mycobacterium avium 104 4529106 YP_879920.1 CDS MAV_0640 NC_008595.1 621620 622300 R hypothetical protein complement(621620..622300) Mycobacterium avium 104 4526033 YP_879921.1 CDS MAV_0641 NC_008595.1 622385 623605 D identified by match to protein family HMM PF00067; P450 heme-thiolate protein 622385..623605 Mycobacterium avium 104 4528129 YP_879922.1 CDS MAV_0642 NC_008595.1 623732 624604 R hypothetical protein complement(623732..624604) Mycobacterium avium 104 4529959 YP_879923.1 CDS MAV_0643 NC_008595.1 624808 625620 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(624808..625620) Mycobacterium avium 104 4530239 YP_879924.1 CDS MAV_0644 NC_008595.1 625685 627325 D activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence; acyl-CoA synthetase 625685..627325 Mycobacterium avium 104 4526350 YP_879925.1 CDS MAV_0645 NC_008595.1 627335 628102 D identified by match to protein family HMM PF01636; match to protein family HMM PF03881; phosphotransferase enzyme family protein, putative 627335..628102 Mycobacterium avium 104 4528700 YP_879926.1 CDS MAV_0646 NC_008595.1 628125 628952 D identified by match to protein family HMM PF04909; amidohydrolase 628125..628952 Mycobacterium avium 104 4526688 YP_879927.1 CDS MAV_0648 NC_008595.1 628949 630499 D thiamine-pyrophosphate requiring enzyme; hypothetical protein 628949..630499 Mycobacterium avium 104 4529593 YP_879928.1 CDS MAV_0647 NC_008595.1 630485 631198 R hypothetical protein complement(630485..631198) Mycobacterium avium 104 4527690 YP_879929.1 CDS MAV_0649 NC_008595.1 631326 631607 R hypothetical protein complement(631326..631607) Mycobacterium avium 104 4529387 YP_879930.1 CDS MAV_0650 NC_008595.1 631589 633100 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(631589..633100) Mycobacterium avium 104 4529335 YP_879931.1 CDS MAV_0651 NC_008595.1 633106 634203 R identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(633106..634203) Mycobacterium avium 104 4527665 YP_879932.1 CDS MAV_0652 NC_008595.1 634233 635411 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(634233..635411) Mycobacterium avium 104 4530322 YP_879933.1 CDS MAV_0653 NC_008595.1 635625 635816 D hypothetical protein 635625..635816 Mycobacterium avium 104 4527738 YP_879934.1 CDS fabG NC_008595.1 635898 636767 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 635898..636767 Mycobacterium avium 104 4527289 YP_879935.1 CDS MAV_0655 NC_008595.1 637004 637768 D identified by match to protein family HMM PF02405; hypothetical protein 637004..637768 Mycobacterium avium 104 4526735 YP_879936.1 CDS MAV_0656 NC_008595.1 637788 638630 D identified by match to protein family HMM PF02405; ABC transporter transmembrane protein 637788..638630 Mycobacterium avium 104 4526053 YP_879937.1 CDS MAV_0657 NC_008595.1 638700 639854 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 638700..639854 Mycobacterium avium 104 4529408 YP_879938.1 CDS MAV_0658 NC_008595.1 639854 640906 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 639854..640906 Mycobacterium avium 104 4529690 YP_879939.1 CDS MAV_0659 NC_008595.1 640896 641960 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 640896..641960 Mycobacterium avium 104 4526480 YP_879940.1 CDS MAV_0660 NC_008595.1 641957 643384 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 641957..643384 Mycobacterium avium 104 4525626 YP_879941.1 CDS MAV_0661 NC_008595.1 643390 644535 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 643390..644535 Mycobacterium avium 104 4529142 YP_879942.1 CDS MAV_0663 NC_008595.1 646286 647017 D hypothetical protein 646286..647017 Mycobacterium avium 104 4527703 YP_879943.1 CDS MAV_0664 NC_008595.1 647017 647508 D hypothetical protein 647017..647508 Mycobacterium avium 104 4530671 YP_879944.1 CDS MAV_0665 NC_008595.1 647521 648099 R hypothetical protein complement(647521..648099) Mycobacterium avium 104 4527079 YP_879945.1 CDS otsA NC_008595.1 648192 649670 R identified by match to protein family HMM PF00534; match to protein family HMM PF00982; UDP-forming alpha,alpha-trehalose-phosphate synthase complement(648192..649670) Mycobacterium avium 104 4527455 YP_879946.1 CDS MAV_0667 NC_008595.1 649671 649835 R hypothetical protein complement(649671..649835) Mycobacterium avium 104 4530079 YP_879947.1 CDS pstB NC_008595.1 649968 650672 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 649968..650672 Mycobacterium avium 104 4528070 YP_879948.1 CDS MAV_0669 NC_008595.1 650669 651451 D identified by match to protein family HMM PF03649; match to protein family HMM TIGR00245; hypothetical protein 650669..651451 Mycobacterium avium 104 4528883 YP_879949.1 CDS MAV_0670 NC_008595.1 651534 652469 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 651534..652469 Mycobacterium avium 104 4528566 YP_879950.1 CDS MAV_0671 NC_008595.1 652560 653405 D identified by match to protein family HMM PF00106; short chain dehydrogenase 652560..653405 Mycobacterium avium 104 4529297 YP_879951.1 CDS MAV_0672 NC_008595.1 653420 654211 D identified by match to protein family HMM PF00106; oxidoreductase 653420..654211 Mycobacterium avium 104 4528042 YP_879952.1 CDS MAV_0673 NC_008595.1 654216 655781 R identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; cell envelope-related function transcriptional attenuator complement(654216..655781) Mycobacterium avium 104 4526526 YP_879953.1 CDS MAV_0674 NC_008595.1 656090 656332 R hypothetical protein complement(656090..656332) Mycobacterium avium 104 4527899 YP_879954.1 CDS MAV_0675 NC_008595.1 656510 656686 D hypothetical protein 656510..656686 Mycobacterium avium 104 4528025 YP_879955.1 CDS MAV_0676 NC_008595.1 656711 658189 R identified by match to protein family HMM PF01425; 6-aminohexanoate-cyclic-dimer hydrolase complement(656711..658189) Mycobacterium avium 104 4525768 YP_879956.1 CDS MAV_0677 NC_008595.1 658269 659138 D identified by match to protein family HMM PF00561; alpha/beta hydrolase 658269..659138 Mycobacterium avium 104 4529434 YP_879957.1 CDS MAV_0678 NC_008595.1 659221 659889 D hypothetical protein 659221..659889 Mycobacterium avium 104 4527209 YP_879958.1 CDS MAV_0679 NC_008595.1 660045 660491 D identified by match to protein family HMM PF05481; lipoprotein LpqH 660045..660491 Mycobacterium avium 104 4528844 YP_879959.1 CDS MAV_0680 NC_008595.1 660541 661500 D hypothetical protein 660541..661500 Mycobacterium avium 104 4525640 YP_879960.1 CDS MAV_0681 NC_008595.1 661507 662448 R identified by match to protein family HMM PF01464; transglycosylase complement(661507..662448) Mycobacterium avium 104 4528337 YP_879961.1 CDS MAV_0682 NC_008595.1 662589 663338 D identified by match to protein family HMM PF05305; hypothetical protein 662589..663338 Mycobacterium avium 104 4530192 YP_879962.1 CDS MAV_0683 NC_008595.1 663446 665344 D hypothetical protein 663446..665344 Mycobacterium avium 104 4526371 YP_879963.1 CDS MAV_0684 NC_008595.1 665979 666155 D hypothetical protein 665979..666155 Mycobacterium avium 104 4525513 YP_879964.1 CDS MAV_0685 NC_008595.1 666235 666525 D hypothetical protein 666235..666525 Mycobacterium avium 104 4525590 YP_879965.1 CDS MAV_0686 NC_008595.1 666932 667069 D hypothetical protein 666932..667069 Mycobacterium avium 104 4527946 YP_879966.1 CDS MAV_0687 NC_008595.1 667197 667901 R hypothetical protein complement(667197..667901) Mycobacterium avium 104 4528108 YP_879967.1 CDS MAV_0688 NC_008595.1 668425 668691 D hypothetical protein 668425..668691 Mycobacterium avium 104 4526818 YP_879968.1 CDS MAV_0689 NC_008595.1 668925 669836 D hypothetical protein 668925..669836 Mycobacterium avium 104 4529801 YP_879969.1 CDS MAV_0690 NC_008595.1 670093 670209 R hypothetical protein complement(670093..670209) Mycobacterium avium 104 4529031 YP_879970.1 CDS MAV_0691 NC_008595.1 670441 670653 D hypothetical protein 670441..670653 Mycobacterium avium 104 4526045 YP_879971.1 CDS MAV_0692 NC_008595.1 670654 671424 D hypothetical protein 670654..671424 Mycobacterium avium 104 4525737 YP_879972.1 CDS MAV_0693 NC_008595.1 671667 671786 D hypothetical protein 671667..671786 Mycobacterium avium 104 4528662 YP_879973.1 CDS MAV_0696 NC_008595.1 673526 673723 R identified by match to protein family HMM PF05930; hypothetical protein complement(673526..673723) Mycobacterium avium 104 4526055 YP_879974.1 CDS MAV_0697 NC_008595.1 674161 674538 D hypothetical protein 674161..674538 Mycobacterium avium 104 4528748 YP_879975.1 CDS MAV_0698 NC_008595.1 674613 675725 D identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase 674613..675725 Mycobacterium avium 104 4526617 YP_879976.1 CDS MAV_0700 NC_008595.1 675903 676619 R hypothetical protein complement(675903..676619) Mycobacterium avium 104 4527288 YP_879977.1 CDS phoP NC_008595.1 676779 677498 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator PhoP 676779..677498 Mycobacterium avium 104 4529059 YP_879978.1 CDS MAV_0703 NC_008595.1 677539 678975 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 677539..678975 Mycobacterium avium 104 4528843 YP_879979.1 CDS MAV_0702 NC_008595.1 678963 679367 R identified by match to protein family HMM PF01230; HIT domain-containing protein complement(678963..679367) Mycobacterium avium 104 4525924 YP_879980.1 CDS MAV_0704 NC_008595.1 679402 679824 R identified by match to protein family HMM PF02136; steroid delta-isomerase complement(679402..679824) Mycobacterium avium 104 4525874 YP_879981.1 CDS MAV_0705 NC_008595.1 679894 681021 R identified by match to protein family HMM PF00107; alcohol dehydrogenase B complement(679894..681021) Mycobacterium avium 104 4530798 YP_879982.1 CDS MAV_0706 NC_008595.1 681234 681782 R hypothetical protein complement(681234..681782) Mycobacterium avium 104 4529691 YP_879983.1 CDS MAV_0707 NC_008595.1 681786 681995 R hypothetical protein complement(681786..681995) Mycobacterium avium 104 4530090 YP_879984.1 CDS MAV_0708 NC_008595.1 682008 683363 R identified by match to protein family HMM PF00067; cytochrome P450 51 complement(682008..683363) Mycobacterium avium 104 4526373 YP_879985.1 CDS MAV_0709 NC_008595.1 683360 684187 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase complement(683360..684187) Mycobacterium avium 104 4526868 YP_879986.1 CDS MAV_0711 NC_008595.1 685410 686057 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(685410..686057) Mycobacterium avium 104 4525951 YP_879987.1 CDS MAV_0712 NC_008595.1 686067 686267 R hypothetical protein complement(686067..686267) Mycobacterium avium 104 4526361 YP_879988.1 CDS MAV_0713 NC_008595.1 686271 687740 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase (NAD) family protein 686271..687740 Mycobacterium avium 104 4528836 YP_879989.1 CDS MAV_0714 NC_008595.1 687771 688520 D identified by match to protein family HMM PF00106; short chain dehydrogenase 687771..688520 Mycobacterium avium 104 4525778 YP_879990.1 CDS MAV_0715 NC_008595.1 688517 689395 D identified by match to protein family HMM PF03446; oxidoreductase 688517..689395 Mycobacterium avium 104 4529089 YP_879991.1 CDS pcaC NC_008595.1 689392 689832 D identified by match to protein family HMM PF02627; hypothetical protein 689392..689832 Mycobacterium avium 104 4526656 YP_879992.1 CDS purD NC_008595.1 689855 691123 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 689855..691123 Mycobacterium avium 104 4528425 YP_879993.1 CDS ggt NC_008595.1 691120 692703 R identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066; gamma-glutamyltransferase complement(691120..692703) Mycobacterium avium 104 4526369 YP_879994.1 CDS MAV_0719 NC_008595.1 692779 693699 R identified by match to protein family HMM PF00756; match to protein family HMM TIGR01409; esterase complement(692779..693699) Mycobacterium avium 104 4527011 YP_879995.1 CDS MAV_0721 NC_008595.1 693821 694390 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 693821..694390 Mycobacterium avium 104 4525975 YP_879996.1 CDS MAV_0720 NC_008595.1 694344 695135 R hypothetical protein complement(694344..695135) Mycobacterium avium 104 4525722 YP_879997.1 CDS purB NC_008595.1 695239 696657 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 695239..696657 Mycobacterium avium 104 4526792 YP_879998.1 CDS MAV_0723 NC_008595.1 696654 697901 D identified by match to protein family HMM PF00067; P450 monooxygenase 696654..697901 Mycobacterium avium 104 4529966 YP_879999.1 CDS MAV_0724 NC_008595.1 697940 698560 R hypothetical protein complement(697940..698560) Mycobacterium avium 104 4526144 YP_880000.1 CDS purC NC_008595.1 698613 699503 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 698613..699503 Mycobacterium avium 104 4526239 YP_880001.1 CDS MAV_0727 NC_008595.1 699500 701662 D identified by match to protein family HMM PF00326; match to protein family HMM PF02897; protease 2 699500..701662 Mycobacterium avium 104 4530413 YP_880002.1 CDS MAV_0726 NC_008595.1 701591 702067 R hypothetical protein complement(701591..702067) Mycobacterium avium 104 4528971 YP_880003.1 CDS MAV_0728 NC_008595.1 702134 702697 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 702134..702697 Mycobacterium avium 104 4526031 YP_880004.1 CDS MAV_0729 NC_008595.1 702703 704316 R identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; EmrB efflux protein complement(702703..704316) Mycobacterium avium 104 4527951 YP_880005.1 CDS MAV_0730 NC_008595.1 704436 706118 R identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; EmrB efflux protein complement(704436..706118) Mycobacterium avium 104 4529776 YP_880006.1 CDS MAV_0731 NC_008595.1 706192 706884 D hypothetical protein 706192..706884 Mycobacterium avium 104 4529521 YP_880007.1 CDS MAV_0732 NC_008595.1 706933 708600 D proposed role in polysaccahride synthesis; FAD-binding dehydrogenase 706933..708600 Mycobacterium avium 104 4527042 YP_880008.1 CDS MAV_0733 NC_008595.1 708612 709250 R identified by match to protein family HMM PF00753; metallo-beta-lactamase, putative complement(708612..709250) Mycobacterium avium 104 4529087 YP_880009.1 CDS MAV_0734 NC_008595.1 709269 709961 D hypothetical protein 709269..709961 Mycobacterium avium 104 4526285 YP_880010.1 CDS purS NC_008595.1 710024 710263 D With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; phosphoribosylformylglycinamidine synthase subunit PurS 710024..710263 Mycobacterium avium 104 4527890 YP_880011.1 CDS purQ NC_008595.1 710260 710934 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 710260..710934 Mycobacterium avium 104 4527912 YP_880012.1 CDS MAV_0737 NC_008595.1 710946 711452 R hypothetical protein complement(710946..711452) Mycobacterium avium 104 4529663 YP_880013.1 CDS MAV_0738 NC_008595.1 711492 712313 R identified by match to protein family HMM PF00392; match to protein family HMM PF07702; mercuric reductase/transcriptional regulator, fusion complement(711492..712313) Mycobacterium avium 104 4526075 YP_880014.1 CDS MAV_0739 NC_008595.1 712435 712902 R identified by match to protein family HMM PF07883; cupin domain-containing protein complement(712435..712902) Mycobacterium avium 104 4530001 YP_880015.1 CDS MAV_0740 NC_008595.1 712909 713706 R identified by match to protein family HMM PF04454; 29 kDa antigen Cfp29 complement(712909..713706) Mycobacterium avium 104 4529187 YP_880016.1 CDS MAV_0741 NC_008595.1 713703 714713 R identified by match to protein family HMM PF04261; match to protein family HMM TIGR01413; Dyp-type peroxidase complement(713703..714713) Mycobacterium avium 104 4528388 YP_880017.1 CDS MAV_0742 NC_008595.1 714757 716064 D catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 714757..716064 Mycobacterium avium 104 4527705 YP_880018.1 CDS MAV_0743 NC_008595.1 716084 716431 D identified by match to protein family HMM PF00903; glyoxalase 716084..716431 Mycobacterium avium 104 4526426 YP_880019.1 CDS purL NC_008595.1 716782 719079 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 716782..719079 Mycobacterium avium 104 4527834 YP_880020.1 CDS MAV_0745 NC_008595.1 719099 719749 D identified by match to protein family HMM PF02517; caax amino protease 719099..719749 Mycobacterium avium 104 4529636 YP_880021.1 CDS MAV_0746 NC_008595.1 719762 720151 D hypothetical protein 719762..720151 Mycobacterium avium 104 4529647 YP_880022.1 CDS purF NC_008595.1 720289 721815 D Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 720289..721815 Mycobacterium avium 104 4526726 YP_880023.1 CDS purM NC_008595.1 721876 722970 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 721876..722970 Mycobacterium avium 104 4528611 YP_880024.1 CDS MAV_0749 NC_008595.1 723050 723235 R hypothetical protein complement(723050..723235) Mycobacterium avium 104 4530269 YP_880025.1 CDS MAV_0750 NC_008595.1 723382 724476 R identified by match to protein family HMM PF01571; glycine cleavage T-protein (aminomethyl transferase) complement(723382..724476) Mycobacterium avium 104 4526874 YP_880026.1 CDS MAV_0751 NC_008595.1 724587 725456 D catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase 724587..725456 Mycobacterium avium 104 4525993 YP_880027.1 CDS MAV_0752 NC_008595.1 725568 726605 R identified by match to protein family HMM PF00665; transposase complement(725568..726605) Mycobacterium avium 104 4530212 YP_880028.1 CDS MAV_0753 NC_008595.1 726825 727433 R hypothetical protein complement(726825..727433) Mycobacterium avium 104 4527273 YP_880029.1 CDS MAV_0754 NC_008595.1 727478 727576 R hypothetical protein complement(727478..727576) Mycobacterium avium 104 4530102 YP_880030.1 CDS MAV_0755 NC_008595.1 727756 728034 R identified by match to protein family HMM PF07210; SseC protein complement(727756..728034) Mycobacterium avium 104 4526273 YP_880031.1 CDS MAV_0756 NC_008595.1 728060 728893 R identified by match to protein family HMM PF00581; thiosulfate sulfurtransferase complement(728060..728893) Mycobacterium avium 104 4529044 YP_880032.1 CDS MAV_0757 NC_008595.1 728930 729400 R integral membrane protein complement(728930..729400) Mycobacterium avium 104 4527147 YP_880033.1 CDS MAV_0758 NC_008595.1 729623 730042 R identified by match to protein family HMM PF00085; thioredoxin complement(729623..730042) Mycobacterium avium 104 4525628 YP_880034.1 CDS MAV_0759 NC_008595.1 730039 730851 R hypothetical protein complement(730039..730851) Mycobacterium avium 104 4528370 YP_880035.1 CDS MAV_0760 NC_008595.1 731020 731802 D identified by match to protein family HMM PF00486; transcriptional regulator 731020..731802 Mycobacterium avium 104 4526232 YP_880036.1 CDS MAV_0761 NC_008595.1 731799 732749 D identified by match to protein family HMM PF00583; acetyltransferase, GNAT family protein 731799..732749 Mycobacterium avium 104 4528698 YP_880037.1 CDS MAV_0762 NC_008595.1 732786 732899 R hypothetical protein complement(732786..732899) Mycobacterium avium 104 4525713 YP_880038.1 CDS MAV_0763 NC_008595.1 733973 734086 R hypothetical protein complement(733973..734086) Mycobacterium avium 104 4529045 YP_880039.1 CDS pstA NC_008595.1 735129 736043 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease 735129..736043 Mycobacterium avium 104 4529601 YP_880040.1 CDS pstB NC_008595.1 736056 736832 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 736056..736832 Mycobacterium avium 104 4526325 YP_880041.1 CDS phoU NC_008595.1 737019 737687 R identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate transport system regulatory protein PhoU complement(737019..737687) Mycobacterium avium 104 4527499 YP_880042.1 CDS MAV_0769 NC_008595.1 737746 739734 R identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; LytR/CpsA/Psr family protein complement(737746..739734) Mycobacterium avium 104 4527560 YP_880043.1 CDS MAV_0770 NC_008595.1 739792 740055 D hypothetical protein 739792..740055 Mycobacterium avium 104 4528216 YP_880044.1 CDS MAV_0771 NC_008595.1 740057 741190 R identified by match to protein family HMM PF01207; match to protein family HMM TIGR00737; dihydrouridine synthase complement(740057..741190) Mycobacterium avium 104 4527373 YP_880045.1 CDS MAV_0772 NC_008595.1 741197 742219 R identified by match to protein family HMM PF03405; fatty acid desaturase complement(741197..742219) Mycobacterium avium 104 4528057 YP_880046.1 CDS MAV_0773 NC_008595.1 742404 742982 R hypothetical protein complement(742404..742982) Mycobacterium avium 104 4529559 YP_880047.1 CDS MAV_0774 NC_008595.1 743087 744160 D hypothetical protein 743087..744160 Mycobacterium avium 104 4528287 YP_880048.1 CDS MAV_0775 NC_008595.1 744177 744380 R zinc transporter complement(744177..744380) Mycobacterium avium 104 4528851 YP_880049.1 CDS MAV_0776 NC_008595.1 744436 744768 R identified by match to protein family HMM PF01022; ArsR family transcriptional regulator complement(744436..744768) Mycobacterium avium 104 4528148 YP_880050.1 CDS MAV_0777 NC_008595.1 744881 745381 R identified by match to protein family HMM PF00383; cytidine/deoxycytidylate deaminase complement(744881..745381) Mycobacterium avium 104 4526063 YP_880051.1 CDS MAV_0778 NC_008595.1 745460 746356 D identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein 745460..746356 Mycobacterium avium 104 4528175 YP_880052.1 CDS MAV_0779 NC_008595.1 746939 747421 D identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase 746939..747421 Mycobacterium avium 104 4526514 YP_880053.1 CDS MAV_0780 NC_008595.1 747462 747791 D hypothetical protein 747462..747791 Mycobacterium avium 104 4529578 YP_880054.1 CDS MAV_0781 NC_008595.1 747788 748441 D hypothetical protein 747788..748441 Mycobacterium avium 104 4529911 YP_880055.1 CDS MAV_0782 NC_008595.1 748452 748553 R hypothetical protein complement(748452..748553) Mycobacterium avium 104 4526523 YP_880056.1 CDS MAV_0783 NC_008595.1 748550 749020 R hypothetical protein complement(748550..749020) Mycobacterium avium 104 4527592 YP_880057.1 CDS MAV_0784 NC_008595.1 749056 749328 R hypothetical protein complement(749056..749328) Mycobacterium avium 104 4530177 YP_880058.1 CDS MAV_0785 NC_008595.1 749399 749569 R hypothetical protein complement(749399..749569) Mycobacterium avium 104 4525620 YP_880059.1 CDS MAV_0786 NC_008595.1 749633 750574 R gp53 protein complement(749633..750574) Mycobacterium avium 104 4527177 YP_880060.1 CDS MAV_0787 NC_008595.1 750571 751947 R identified by match to protein family HMM PF01183; gp50 protein complement(750571..751947) Mycobacterium avium 104 4527693 YP_880061.1 CDS MAV_0788 NC_008595.1 751944 752360 R hypothetical protein complement(751944..752360) Mycobacterium avium 104 4527434 YP_880062.1 CDS MAV_0789 NC_008595.1 752341 753216 R hypothetical protein complement(752341..753216) Mycobacterium avium 104 4526249 YP_880063.1 CDS MAV_0790 NC_008595.1 753228 754160 R identified by match to protein family HMM PF00823; PPE family protein complement(753228..754160) Mycobacterium avium 104 4526446 YP_880064.1 CDS MAV_0791 NC_008595.1 754309 756006 R hypothetical protein complement(754309..756006) Mycobacterium avium 104 4528297 YP_880065.1 CDS MAV_0792 NC_008595.1 756008 756397 R gp34 protein complement(756008..756397) Mycobacterium avium 104 4528872 YP_880066.1 CDS MAV_0793 NC_008595.1 756408 756839 R gp27 protein complement(756408..756839) Mycobacterium avium 104 4526471 YP_880067.1 CDS MAV_0794 NC_008595.1 756886 758385 R gp28 protein complement(756886..758385) Mycobacterium avium 104 4527199 YP_880068.1 CDS MAV_0795 NC_008595.1 758533 758844 R hypothetical protein complement(758533..758844) Mycobacterium avium 104 4526136 YP_880069.1 CDS MAV_0796 NC_008595.1 758848 760443 R hypothetical protein complement(758848..760443) Mycobacterium avium 104 4528550 YP_880070.1 CDS MAV_0797 NC_008595.1 760440 761345 R gp37 protein complement(760440..761345) Mycobacterium avium 104 4526898 YP_880071.1 CDS MAV_0798 NC_008595.1 761342 763078 R gp36 protein complement(761342..763078) Mycobacterium avium 104 4528580 YP_880072.1 CDS MAV_0799 NC_008595.1 763075 764559 R gp23 protein complement(763075..764559) Mycobacterium avium 104 4528339 YP_880073.1 CDS MAV_0800 NC_008595.1 764576 769555 R identified by match to protein family HMM TIGR01760; phage tail tape measure protein, family protein, core region complement(764576..769555) Mycobacterium avium 104 4530076 YP_880074.1 CDS MAV_0801 NC_008595.1 769607 770008 R hypothetical protein complement(769607..770008) Mycobacterium avium 104 4527392 YP_880075.1 CDS MAV_0802 NC_008595.1 770061 770546 R gp32 protein complement(770061..770546) Mycobacterium avium 104 4527896 YP_880076.1 CDS MAV_0803 NC_008595.1 770634 771680 R gp31 protein complement(770634..771680) Mycobacterium avium 104 4529077 YP_880077.1 CDS MAV_0804 NC_008595.1 771753 772175 R hypothetical protein complement(771753..772175) Mycobacterium avium 104 4527815 YP_880078.1 CDS MAV_0805 NC_008595.1 772172 772693 R hypothetical protein complement(772172..772693) Mycobacterium avium 104 4527482 YP_880079.1 CDS MAV_0806 NC_008595.1 772788 773225 R hypothetical protein complement(772788..773225) Mycobacterium avium 104 4528974 YP_880080.1 CDS MAV_0807 NC_008595.1 773218 773700 R hypothetical protein complement(773218..773700) Mycobacterium avium 104 4530328 YP_880081.1 CDS MAV_0808 NC_008595.1 773702 774034 R hypothetical protein complement(773702..774034) Mycobacterium avium 104 4525817 YP_880082.1 CDS MAV_0809 NC_008595.1 774034 775071 R hypothetical protein complement(774034..775071) Mycobacterium avium 104 4529808 YP_880083.1 CDS MAV_0810 NC_008595.1 775180 775578 R hypothetical protein complement(775180..775578) Mycobacterium avium 104 4529371 YP_880084.1 CDS MAV_0811 NC_008595.1 775580 776845 R hypothetical protein complement(775580..776845) Mycobacterium avium 104 4526865 YP_880085.1 CDS MAV_0812 NC_008595.1 776851 778272 R hypothetical protein complement(776851..778272) Mycobacterium avium 104 4525782 YP_880086.1 CDS MAV_0813 NC_008595.1 778410 779867 R identified by match to protein family HMM PF03354; phage terminase, large subunit, putative complement(778410..779867) Mycobacterium avium 104 4529034 YP_880087.1 CDS MAV_0814 NC_008595.1 779911 780270 R hypothetical protein complement(779911..780270) Mycobacterium avium 104 4527433 YP_880088.1 CDS MAV_0815 NC_008595.1 780481 780702 R hypothetical protein complement(780481..780702) Mycobacterium avium 104 4528597 YP_880089.1 CDS MAV_0816 NC_008595.1 780831 781064 R hypothetical protein complement(780831..781064) Mycobacterium avium 104 4528378 YP_880090.1 CDS MAV_0817 NC_008595.1 781061 781471 R hypothetical protein complement(781061..781471) Mycobacterium avium 104 4526649 YP_880091.1 CDS MAV_0818 NC_008595.1 781461 781871 R hypothetical protein complement(781461..781871) Mycobacterium avium 104 4530730 YP_880092.1 CDS MAV_0819 NC_008595.1 782071 782667 R gp75 protein complement(782071..782667) Mycobacterium avium 104 4525749 YP_880093.1 CDS MAV_0820 NC_008595.1 782667 783032 R hypothetical protein complement(782667..783032) Mycobacterium avium 104 4528713 YP_880094.1 CDS MAV_0821 NC_008595.1 783111 783476 R hypothetical protein complement(783111..783476) Mycobacterium avium 104 4529594 YP_880095.1 CDS MAV_0822 NC_008595.1 783608 783976 R gp79 protein complement(783608..783976) Mycobacterium avium 104 4526623 YP_880096.1 CDS MAV_0823 NC_008595.1 783973 784884 R gp78 protein complement(783973..784884) Mycobacterium avium 104 4528186 YP_880097.1 CDS MAV_0824 NC_008595.1 784884 785099 R hypothetical protein complement(784884..785099) Mycobacterium avium 104 4527557 YP_880098.1 CDS MAV_0825 NC_008595.1 785156 785281 R hypothetical protein complement(785156..785281) Mycobacterium avium 104 4530619 YP_880099.1 CDS MAV_0826 NC_008595.1 785453 785734 R hypothetical protein complement(785453..785734) Mycobacterium avium 104 4529288 YP_880100.1 CDS MAV_0827 NC_008595.1 785833 786243 R hypothetical protein complement(785833..786243) Mycobacterium avium 104 4530568 YP_880101.1 CDS MAV_0828 NC_008595.1 786286 787950 R similar to Rickettsia 17 kDa surface antigen family protein; 17 kDa surface antigen family protein complement(786286..787950) Mycobacterium avium 104 4526844 YP_880102.1 CDS recT NC_008595.1 788198 789310 R identified by match to protein family HMM PF03837; match to protein family HMM TIGR00616; recombination and repair protein RecT complement(788198..789310) Mycobacterium avium 104 4525630 YP_880103.1 CDS MAV_0830 NC_008595.1 789326 790180 R gp60 protein complement(789326..790180) Mycobacterium avium 104 4528331 YP_880104.1 CDS MAV_0831 NC_008595.1 790173 790301 R hypothetical protein complement(790173..790301) Mycobacterium avium 104 4529598 YP_880105.1 CDS MAV_0832 NC_008595.1 790298 790558 R hypothetical protein complement(790298..790558) Mycobacterium avium 104 4527006 YP_880106.1 CDS MAV_0833 NC_008595.1 790604 790762 D hypothetical protein 790604..790762 Mycobacterium avium 104 4526386 YP_880107.1 CDS MAV_0834 NC_008595.1 790940 791188 R hypothetical protein complement(790940..791188) Mycobacterium avium 104 4530334 YP_880108.1 CDS MAV_0835 NC_008595.1 791318 791605 R hypothetical protein complement(791318..791605) Mycobacterium avium 104 4530282 YP_880109.1 CDS MAV_0836 NC_008595.1 791602 791754 R hypothetical protein complement(791602..791754) Mycobacterium avium 104 4528900 YP_880110.1 CDS MAV_0837 NC_008595.1 791751 792539 R identified by match to protein family HMM PF02498; gp54 protein complement(791751..792539) Mycobacterium avium 104 4529357 YP_880111.1 CDS MAV_0838 NC_008595.1 792536 792646 R hypothetical protein complement(792536..792646) Mycobacterium avium 104 4525820 YP_880112.1 CDS MAV_0839 NC_008595.1 792643 793434 R identified by match to protein family HMM PF02498; gp54 protein complement(792643..793434) Mycobacterium avium 104 4526796 YP_880113.1 CDS MAV_0840 NC_008595.1 793512 793724 D hypothetical protein 793512..793724 Mycobacterium avium 104 4529005 YP_880114.1 CDS MAV_0841 NC_008595.1 793769 794035 R identified by match to protein family HMM PF00376; match to protein family HMM TIGR01764; excisionase DNA binding protein complement(793769..794035) Mycobacterium avium 104 4529119 YP_880115.1 CDS MAV_0846 NC_008595.1 794921 795760 R identified by match to protein family HMM PF00106; carveol dehydrogenase complement(794921..795760) Mycobacterium avium 104 4529862 YP_880116.1 CDS MAV_0847 NC_008595.1 795891 796445 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(795891..796445) Mycobacterium avium 104 4527542 YP_880117.1 CDS MAV_0848 NC_008595.1 796608 796826 D hypothetical protein 796608..796826 Mycobacterium avium 104 4526915 YP_880118.1 CDS MAV_0849 NC_008595.1 796831 798111 D identified by match to protein family HMM PF00067; cytochrome p450 796831..798111 Mycobacterium avium 104 4528887 YP_880119.1 CDS MAV_0850 NC_008595.1 798264 798497 D hypothetical protein 798264..798497 Mycobacterium avium 104 4526345 YP_880120.1 CDS MAV_0851 NC_008595.1 798519 798656 R hypothetical protein complement(798519..798656) Mycobacterium avium 104 4526567 YP_880121.1 CDS MAV_0852 NC_008595.1 798980 799183 D identified by match to protein family HMM PF00313; hypothetical protein 798980..799183 Mycobacterium avium 104 4530300 YP_880122.1 CDS ddpX NC_008595.1 799324 800022 D identified by match to protein family HMM PF01427; D-alanyl-D-alanine dipeptidase 799324..800022 Mycobacterium avium 104 4526562 YP_880123.1 CDS MAV_0854 NC_008595.1 800111 800923 D identified by match to protein family HMM PF01209; match to protein family HMM PF05175; methyltransferase-UbiE family protein 800111..800923 Mycobacterium avium 104 4528130 YP_880124.1 CDS MAV_0855 NC_008595.1 800928 801752 R identified by match to protein family HMM PF00106; short chain dehydrogenase complement(800928..801752) Mycobacterium avium 104 4529926 YP_880125.1 CDS MAV_0856 NC_008595.1 801844 803421 D identified by match to protein family HMM PF01642; match to protein family HMM TIGR00641; methylmalonyl-CoA mutase, N-terminus of large subunit 801844..803421 Mycobacterium avium 104 4526624 YP_880126.1 CDS MAV_0857 NC_008595.1 803421 803861 D identified by match to protein family HMM PF02310; match to protein family HMM TIGR00640; methylmalonyl-CoA mutase 803421..803861 Mycobacterium avium 104 4527897 YP_880127.1 CDS MAV_0859 NC_008595.1 804798 805838 D identified by match to protein family HMM PF02515; caib/baif family protein 804798..805838 Mycobacterium avium 104 4530736 YP_880128.1 CDS MAV_0860 NC_008595.1 805948 807213 R identified by match to protein family HMM PF04909; amidohydrolase complement(805948..807213) Mycobacterium avium 104 4528982 YP_880129.1 CDS MAV_0861 NC_008595.1 807217 807531 R hypothetical protein complement(807217..807531) Mycobacterium avium 104 4530387 YP_880130.1 CDS MAV_0862 NC_008595.1 807549 807887 R identified by match to protein family HMM PF00111; FdxB protein complement(807549..807887) Mycobacterium avium 104 4530566 YP_880131.1 CDS MAV_0863 NC_008595.1 808012 809415 D identified by match to protein family HMM PF00501; AMP-binding enzyme 808012..809415 Mycobacterium avium 104 4530497 YP_880132.1 CDS MAV_0864 NC_008595.1 809393 810298 D identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain-containing protein 809393..810298 Mycobacterium avium 104 4530453 YP_880133.1 CDS MAV_0865 NC_008595.1 810285 811367 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; acyl-CoA dehydrogenase middle domain-containing protein 810285..811367 Mycobacterium avium 104 4529282 YP_880134.1 CDS MAV_0866 NC_008595.1 811370 811534 D hypothetical protein 811370..811534 Mycobacterium avium 104 4529562 YP_880135.1 CDS MAV_0867 NC_008595.1 811546 812310 D identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 811546..812310 Mycobacterium avium 104 4526678 YP_880136.1 CDS MAV_0868 NC_008595.1 812316 813167 R identified by match to protein family HMM PF00561; match to protein family HMM TIGR01250; proline imino-peptidase complement(812316..813167) Mycobacterium avium 104 4530103 YP_880137.1 CDS MAV_0869 NC_008595.1 813293 813811 D identified by match to protein family HMM PF05870; phenolic acid decarboxylase 813293..813811 Mycobacterium avium 104 4530338 YP_880138.1 CDS MAV_0871 NC_008595.1 815079 815966 D identified by match to protein family HMM PF03308; match to protein family HMM TIGR00750; LAO/AO transport system ATPase 815079..815966 Mycobacterium avium 104 4527856 YP_880139.1 CDS MAV_0873 NC_008595.1 816100 816993 D identified by match to protein family HMM PF00676; dehydrogenase E1 component superfamily protein 816100..816993 Mycobacterium avium 104 4529038 YP_880140.1 CDS MAV_0872 NC_008595.1 816986 817537 R identified by match to protein family HMM PF00072; match to protein family HMM PF00196; LuxR family transcriptional regulator complement(816986..817537) Mycobacterium avium 104 4530704 YP_880141.1 CDS MAV_0874 NC_008595.1 817755 818975 D identified by match to protein family HMM PF02518; hypothetical protein 817755..818975 Mycobacterium avium 104 4526545 YP_880142.1 CDS MAV_0875 NC_008595.1 819232 820848 R identified by match to protein family HMM PF00890; match to protein family HMM PF01266; FAD binding domain-containing protein complement(819232..820848) Mycobacterium avium 104 4528386 YP_880143.1 CDS MAV_0876 NC_008595.1 820863 821540 R identified by match to protein family HMM PF01614; transcriptional regulator complement(820863..821540) Mycobacterium avium 104 4528736 YP_880144.1 CDS MAV_0877 NC_008595.1 821666 822529 D identified by match to protein family HMM PF00561; 2-hydroxy-6-ketonona-2,4-dienedoic acid hydrolase 821666..822529 Mycobacterium avium 104 4525888 YP_880145.1 CDS mhpA NC_008595.1 822529 824271 D catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate; 3-(3-hydroxyphenyl)propionate hydroxylase 822529..824271 Mycobacterium avium 104 4530673 YP_880146.1 CDS MAV_0880 NC_008595.1 825132 826859 D initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; 3-ketosteroid-delta-1-dehydrogenase 825132..826859 Mycobacterium avium 104 4527002 YP_880147.1 CDS MAV_0881 NC_008595.1 826863 828173 D identified by match to protein family HMM PF00296; hypothetical protein 826863..828173 Mycobacterium avium 104 4527437 YP_880148.1 CDS MAV_0882 NC_008595.1 828199 829026 D catalyzes the formation of 5-alpha-androstane-3,17-dione from androsterone; Acts on other 3-alpha-hydroxysteroids and on 9-, 11- and 15-hydroxyprostaglandin.; 3-alpha-hydroxysteroid dehydrogenase 828199..829026 Mycobacterium avium 104 4527313 YP_880149.1 CDS MAV_0883 NC_008595.1 829014 830003 D identified by match to protein family HMM PF04199; cyclase 829014..830003 Mycobacterium avium 104 4528917 YP_880150.1 CDS MAV_0884 NC_008595.1 830016 830837 D identified by match to protein family HMM PF00561; alpha/beta hydrolase 830016..830837 Mycobacterium avium 104 4527691 YP_880151.1 CDS MAV_0886 NC_008595.1 832658 833464 D identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase SDR 832658..833464 Mycobacterium avium 104 4527817 YP_880152.1 CDS MAV_0887 NC_008595.1 833527 834204 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 833527..834204 Mycobacterium avium 104 4527893 YP_880153.1 CDS MAV_0888 NC_008595.1 834223 834411 D hypothetical protein 834223..834411 Mycobacterium avium 104 4527300 YP_880154.1 CDS MAV_0890 NC_008595.1 835828 836889 D identified by match to protein family HMM PF04909; amidohydrolase 835828..836889 Mycobacterium avium 104 4528309 YP_880155.1 CDS MAV_0891 NC_008595.1 836889 838142 D identified by match to protein family HMM PF00557; peptidase, M24 family protein 836889..838142 Mycobacterium avium 104 4529470 YP_880156.1 CDS MAV_0892 NC_008595.1 838132 839259 D identified by match to protein family HMM PF00557; peptidase, M24 family protein 838132..839259 Mycobacterium avium 104 4526180 YP_880157.1 CDS MAV_0893 NC_008595.1 839292 841709 D identified by match to protein family HMM PF02515; caib/baif family protein 839292..841709 Mycobacterium avium 104 4528793 YP_880158.1 CDS MAV_0894 NC_008595.1 841716 842525 D identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 841716..842525 Mycobacterium avium 104 4529092 YP_880159.1 CDS MAV_0895 NC_008595.1 842572 843414 R identified by match to protein family HMM PF00106; short chain dehydrogenase complement(842572..843414) Mycobacterium avium 104 4527230 YP_880160.1 CDS MAV_0896 NC_008595.1 843426 844274 R identified by match to protein family HMM PF00106; carveol dehydrogenase complement(843426..844274) Mycobacterium avium 104 4527339 YP_880161.1 CDS MAV_0898 NC_008595.1 845408 846583 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 845408..846583 Mycobacterium avium 104 4525614 YP_880162.1 CDS MAV_0899 NC_008595.1 846592 846861 R hypothetical protein complement(846592..846861) Mycobacterium avium 104 4527390 YP_880163.1 CDS MAV_0900 NC_008595.1 846937 847755 R identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(846937..847755) Mycobacterium avium 104 4529148 YP_880164.1 CDS MAV_0901 NC_008595.1 847759 848856 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase complement(847759..848856) Mycobacterium avium 104 4528008 YP_880165.1 CDS MAV_0902 NC_008595.1 848877 849323 R hypothetical protein complement(848877..849323) Mycobacterium avium 104 4525584 YP_880166.1 CDS MAV_0903 NC_008595.1 849304 850533 R identified by match to protein family HMM PF01979; match to protein family HMM PF07969; Xaa-Pro dipeptidase complement(849304..850533) Mycobacterium avium 104 4528183 YP_880167.1 CDS MAV_0904 NC_008595.1 850536 850865 R hypothetical protein complement(850536..850865) Mycobacterium avium 104 4527074 YP_880168.1 CDS MAV_0905 NC_008595.1 850843 852126 R identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein complement(850843..852126) Mycobacterium avium 104 4529707 YP_880169.1 CDS pcaC NC_008595.1 852145 852678 R identified by match to protein family HMM PF02627; hypothetical protein complement(852145..852678) Mycobacterium avium 104 4527488 YP_880170.1 CDS MAV_0907 NC_008595.1 852999 854297 D identified by match to protein family HMM PF04909; amidohydrolase 852999..854297 Mycobacterium avium 104 4525728 YP_880171.1 CDS MAV_0909 NC_008595.1 855668 856822 D identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; acetyl-CoA acetyltransferase 855668..856822 Mycobacterium avium 104 4528994 YP_880172.1 CDS MAV_0910 NC_008595.1 856928 857542 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 856928..857542 Mycobacterium avium 104 4529667 YP_880173.1 CDS MAV_0911 NC_008595.1 857539 858066 D hypothetical protein 857539..858066 Mycobacterium avium 104 4526387 YP_880174.1 CDS MAV_0912 NC_008595.1 858205 859479 D cytochrome p450 858205..859479 Mycobacterium avium 104 4527606 YP_880175.1 CDS MAV_0913 NC_008595.1 859518 859664 D hypothetical protein 859518..859664 Mycobacterium avium 104 4526330 YP_880176.1 CDS MAV_0914 NC_008595.1 859685 859978 D identified by match to protein family HMM PF07045; hypothetical protein 859685..859978 Mycobacterium avium 104 4525723 YP_880177.1 CDS MAV_0915 NC_008595.1 859986 860186 R hypothetical protein complement(859986..860186) Mycobacterium avium 104 4528837 YP_880178.1 CDS MAV_0916 NC_008595.1 860197 861402 R identified by match to protein family HMM PF00067; cytochrome P450 monooxygenase complement(860197..861402) Mycobacterium avium 104 4529764 YP_880179.1 CDS MAV_0917 NC_008595.1 861579 862394 R identified by match to protein family HMM PF03446; match to protein family HMM PF03807; 6-phosphogluconate dehydrogenase complement(861579..862394) Mycobacterium avium 104 4527293 YP_880180.1 CDS MAV_0918 NC_008595.1 862394 863428 R hypothetical protein complement(862394..863428) Mycobacterium avium 104 4526084 YP_880181.1 CDS MAV_0919 NC_008595.1 863425 865077 R identified by match to protein family HMM PF01796; hypothetical protein complement(863425..865077) Mycobacterium avium 104 4528118 YP_880182.1 CDS MAV_0920 NC_008595.1 865188 865364 R hypothetical protein complement(865188..865364) Mycobacterium avium 104 4530185 YP_880183.1 CDS MAV_0921 NC_008595.1 865619 866611 D identified by match to protein family HMM PF01370; match to protein family HMM PF05368; match to protein family HMM PF07993; hypothetical protein 865619..866611 Mycobacterium avium 104 4528859 YP_880184.1 CDS MAV_0922 NC_008595.1 866623 867366 D hypothetical protein 866623..867366 Mycobacterium avium 104 4526522 YP_880185.1 CDS MAV_0923 NC_008595.1 867379 868335 D identified by match to protein family HMM PF00296; hypothetical protein 867379..868335 Mycobacterium avium 104 4528983 YP_880186.1 CDS MAV_0924 NC_008595.1 868339 868635 R hypothetical protein complement(868339..868635) Mycobacterium avium 104 4528751 YP_880187.1 CDS MAV_0925 NC_008595.1 868632 869942 R identified by match to protein family HMM PF01512; respiratory-chain NADH dehydrogenase 51 kd subunit family protein complement(868632..869942) Mycobacterium avium 104 4529887 YP_880188.1 CDS MAV_0926 NC_008595.1 869991 870452 D hypothetical protein 869991..870452 Mycobacterium avium 104 4526986 YP_880189.1 CDS MAV_0927 NC_008595.1 870458 871324 R hypothetical protein complement(870458..871324) Mycobacterium avium 104 4526405 YP_880190.1 CDS MAV_0928 NC_008595.1 871340 871753 R identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein complement(871340..871753) Mycobacterium avium 104 4530234 YP_880191.1 CDS MAV_0929 NC_008595.1 871755 872897 R identified by match to protein family HMM PF04909; amidohydrolase complement(871755..872897) Mycobacterium avium 104 4525708 YP_880192.1 CDS MAV_0930 NC_008595.1 872934 874025 R identified by match to protein family HMM PF04909; amidohydrolase complement(872934..874025) Mycobacterium avium 104 4526831 YP_880193.1 CDS MAV_0931 NC_008595.1 874261 875154 R identified by match to protein family HMM PF03446; 3-hydroxyisobutyrate dehydrogenase complement(874261..875154) Mycobacterium avium 104 4525597 YP_880194.1 CDS MAV_0933 NC_008595.1 875778 876398 D identified by match to protein family HMM PF00881; nitroreductase 875778..876398 Mycobacterium avium 104 4530490 YP_880195.1 CDS MAV_0934 NC_008595.1 876520 877518 D identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase 876520..877518 Mycobacterium avium 104 4529771 YP_880196.1 CDS MAV_0935 NC_008595.1 877502 878677 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 877502..878677 Mycobacterium avium 104 4526635 YP_880197.1 CDS MAV_0936 NC_008595.1 878683 880047 R identified by match to protein family HMM PF00756; esterase complement(878683..880047) Mycobacterium avium 104 4528494 YP_880198.1 CDS MAV_0937 NC_008595.1 880265 880828 R hypothetical protein complement(880265..880828) Mycobacterium avium 104 4525900 YP_880199.1 CDS MAV_0938 NC_008595.1 880825 881715 R hypothetical protein complement(880825..881715) Mycobacterium avium 104 4528842 YP_880200.1 CDS MAV_0939 NC_008595.1 881771 882187 R hypothetical protein complement(881771..882187) Mycobacterium avium 104 4527744 YP_880201.1 CDS MAV_0940 NC_008595.1 882311 883675 R identified by match to protein family HMM PF00067; cytochrome P450 superfamily protein complement(882311..883675) Mycobacterium avium 104 4528185 YP_880202.1 CDS MAV_0941 NC_008595.1 883714 883914 R hypothetical protein complement(883714..883914) Mycobacterium avium 104 4527304 YP_880203.1 CDS MAV_0942 NC_008595.1 883973 884674 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; 3-oxoacyl-(acyl-carrier-protein) reductase, putative complement(883973..884674) Mycobacterium avium 104 4529922 YP_880204.1 CDS MAV_0943 NC_008595.1 884762 884875 D hypothetical protein 884762..884875 Mycobacterium avium 104 4527756 YP_880205.1 CDS MAV_0944 NC_008595.1 884926 886497 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase (NAD) family protein 884926..886497 Mycobacterium avium 104 4526662 YP_880206.1 CDS MAV_0945 NC_008595.1 886494 887699 D identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F 886494..887699 Mycobacterium avium 104 4526311 YP_880207.1 CDS MAV_0946 NC_008595.1 888081 888899 D identified by match to protein family HMM PF02405; TrnB1 protein 888081..888899 Mycobacterium avium 104 4528157 YP_880208.1 CDS MAV_0947 NC_008595.1 888910 889755 D identified by match to protein family HMM PF02405; TrnB2 protein 888910..889755 Mycobacterium avium 104 4527118 YP_880209.1 CDS MAV_0948 NC_008595.1 889775 891037 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 889775..891037 Mycobacterium avium 104 4526158 YP_880210.1 CDS MAV_0949 NC_008595.1 891034 892056 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 891034..892056 Mycobacterium avium 104 4528667 YP_880211.1 CDS MAV_0950 NC_008595.1 892056 893174 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 892056..893174 Mycobacterium avium 104 4527938 YP_880212.1 CDS MAV_0951 NC_008595.1 893171 894598 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 893171..894598 Mycobacterium avium 104 4529223 YP_880213.1 CDS MAV_0953 NC_008595.1 895904 897631 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; mce-family protein mce1f 895904..897631 Mycobacterium avium 104 4527335 YP_880214.1 CDS MAV_0954 NC_008595.1 897704 898225 R hypothetical protein complement(897704..898225) Mycobacterium avium 104 4530011 YP_880215.1 CDS MAV_0955 NC_008595.1 898359 898964 R hypothetical protein complement(898359..898964) Mycobacterium avium 104 4526292 YP_880216.1 CDS MAV_0956 NC_008595.1 898961 899704 R hypothetical protein complement(898961..899704) Mycobacterium avium 104 4530781 YP_880217.1 CDS MAV_0957 NC_008595.1 900064 900189 R hypothetical protein complement(900064..900189) Mycobacterium avium 104 4527750 YP_880218.1 CDS MAV_0958 NC_008595.1 900176 900307 D hypothetical protein 900176..900307 Mycobacterium avium 104 4526775 YP_880219.1 CDS MAV_0959 NC_008595.1 900313 900915 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(900313..900915) Mycobacterium avium 104 4530696 YP_880220.1 CDS MAV_0960 NC_008595.1 901015 901779 D hypothetical protein 901015..901779 Mycobacterium avium 104 4528941 YP_880221.1 CDS MAV_0961 NC_008595.1 901785 902582 D hypothetical protein 901785..902582 Mycobacterium avium 104 4530221 YP_880222.1 CDS MAV_0962 NC_008595.1 902579 903157 D identified by match to protein family HMM PF00510; cytochrome C oxidase, subunit III 902579..903157 Mycobacterium avium 104 4528821 YP_880223.1 CDS MAV_0963 NC_008595.1 903161 903439 D hypothetical protein 903161..903439 Mycobacterium avium 104 4527652 YP_880224.1 CDS MAV_0964 NC_008595.1 903441 904736 R identified by match to protein family HMM PF00067; cytochrome p450 complement(903441..904736) Mycobacterium avium 104 4530303 YP_880225.1 CDS MAV_0966 NC_008595.1 904930 905667 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 904930..905667 Mycobacterium avium 104 4527903 YP_880226.1 CDS MAV_0965 NC_008595.1 905583 906026 R hypothetical protein complement(905583..906026) Mycobacterium avium 104 4527405 YP_880227.1 CDS MAV_0967 NC_008595.1 906023 906778 R identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase complement(906023..906778) Mycobacterium avium 104 4528433 YP_880228.1 CDS MAV_0969 NC_008595.1 906887 907306 D hypothetical protein 906887..907306 Mycobacterium avium 104 4528395 YP_880229.1 CDS MAV_0968 NC_008595.1 907284 907403 R hypothetical protein complement(907284..907403) Mycobacterium avium 104 4527686 YP_880230.1 CDS MAV_0970 NC_008595.1 907395 908585 D identified by match to protein family HMM PF04909; amidohydrolase 907395..908585 Mycobacterium avium 104 4527715 YP_880231.1 CDS MAV_0971 NC_008595.1 908602 910077 D activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 908602..910077 Mycobacterium avium 104 4528122 YP_880232.1 CDS MAV_0972 NC_008595.1 910074 910700 D acyl-CoA dehydrogenase 910074..910700 Mycobacterium avium 104 4530547 YP_880233.1 CDS MAV_0974 NC_008595.1 910711 910896 D identified by match to protein family HMM PF04324; hypothetical protein 910711..910896 Mycobacterium avium 104 4527660 YP_880234.1 CDS MAV_0973 NC_008595.1 910893 912578 R identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; indole-3-pyruvate decarboxylase complement(910893..912578) Mycobacterium avium 104 4529569 YP_880235.1 CDS MAV_0975 NC_008595.1 912644 913087 D similar to streptomyces cyclase/dehydrase; identified by match to protein family HMM PF03364; cyclase/dehydrase 912644..913087 Mycobacterium avium 104 4529991 YP_880236.1 CDS MAV_0976 NC_008595.1 913093 914172 D identified by match to protein family HMM PF02515; alpha-methylacyl-CoA racemase 913093..914172 Mycobacterium avium 104 4525696 YP_880237.1 CDS MAV_0977 NC_008595.1 914230 914694 D similar to streptomyces cyclase/dehydrase; identified by match to protein family HMM PF03364; cyclase/dehydrase 914230..914694 Mycobacterium avium 104 4528573 YP_880238.1 CDS MAV_0978 NC_008595.1 914701 915156 D hypothetical protein 914701..915156 Mycobacterium avium 104 4530146 YP_880239.1 CDS MAV_0979 NC_008595.1 915158 916339 R identified by match to protein family HMM PF00155; aminotransferase complement(915158..916339) Mycobacterium avium 104 4526596 YP_880240.1 CDS MAV_0980 NC_008595.1 916773 917984 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 916773..917984 Mycobacterium avium 104 4526836 YP_880241.1 CDS MAV_0981 NC_008595.1 917989 920136 D identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; acyl-CoA dehydrogenase 917989..920136 Mycobacterium avium 104 4530249 YP_880242.1 CDS MAV_0982 NC_008595.1 920214 920816 R identified by match to protein family HMM PF05724; methyltransferase type 12 complement(920214..920816) Mycobacterium avium 104 4528670 YP_880243.1 CDS MAV_0983 NC_008595.1 920866 921726 R hypothetical protein complement(920866..921726) Mycobacterium avium 104 4527929 YP_880244.1 CDS MAV_0984 NC_008595.1 921758 922966 R hypothetical protein complement(921758..922966) Mycobacterium avium 104 4529118 YP_880245.1 CDS MAV_0985 NC_008595.1 923118 923594 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 923118..923594 Mycobacterium avium 104 4527084 YP_880246.1 CDS MAV_0986 NC_008595.1 923591 924628 D identified by match to protein family HMM PF00296; hypothetical protein 923591..924628 Mycobacterium avium 104 4529661 YP_880247.1 CDS MAV_0987 NC_008595.1 924653 924946 R identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase domain-containing protein complement(924653..924946) Mycobacterium avium 104 4530125 YP_880248.1 CDS MAV_0988 NC_008595.1 925098 925511 D identified by match to protein family HMM PF01796; hypothetical protein 925098..925511 Mycobacterium avium 104 4530391 YP_880249.1 CDS MAV_0989 NC_008595.1 925523 926668 D identified by match to protein family HMM PF02803; thiolase 925523..926668 Mycobacterium avium 104 4529390 YP_880250.1 CDS MAV_0990 NC_008595.1 926756 928405 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; DNA or RNA helicase of superfamily protein II complement(926756..928405) Mycobacterium avium 104 4526867 YP_880251.1 CDS MAV_0991 NC_008595.1 928446 930704 R hypothetical protein complement(928446..930704) Mycobacterium avium 104 4525743 YP_880252.1 CDS MAV_0992 NC_008595.1 930834 931034 D hypothetical protein 930834..931034 Mycobacterium avium 104 4528929 YP_880253.1 CDS moaC NC_008595.1 931145 931573 D identified by match to protein family HMM PF01967; match to protein family HMM TIGR00581; molybdenum cofactor biosynthesis protein C 931145..931573 Mycobacterium avium 104 4528198 YP_880254.1 CDS MAV_0994 NC_008595.1 931570 932052 D identified by match to protein family HMM PF00994; match to protein family HMM TIGR00177; molybdenum cofactor synthesis domain-containing protein 931570..932052 Mycobacterium avium 104 4527877 YP_880255.1 CDS moaE NC_008595.1 932049 932474 D identified by match to protein family HMM PF02391; molybdopterin converting factor, subunit 2 932049..932474 Mycobacterium avium 104 4525864 YP_880256.1 CDS MAV_0996 NC_008595.1 932553 933257 R identified by match to protein family HMM PF06737; resuscitation-promoting factor RpfA complement(932553..933257) Mycobacterium avium 104 4529453 YP_880257.1 CDS MAV_0997 NC_008595.1 933760 934038 R identified by match to protein family HMM PF02597; ThiS family protein complement(933760..934038) Mycobacterium avium 104 4529935 YP_880258.1 CDS MAV_0999 NC_008595.1 935133 935540 R identified by match to protein family HMM PF03733; hypothetical protein complement(935133..935540) Mycobacterium avium 104 4528733 YP_880259.1 CDS MAV_1000 NC_008595.1 935704 936111 D identified by match to protein family HMM PF00313; cold shock DNA-binding domain-containing protein 935704..936111 Mycobacterium avium 104 4530189 YP_880260.1 CDS MAV_1001 NC_008595.1 936210 938138 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 936210..938138 Mycobacterium avium 104 4527320 YP_880261.1 CDS MAV_1003 NC_008595.1 938186 939190 D glutathione S-transferase 938186..939190 Mycobacterium avium 104 4526695 YP_880262.1 CDS MAV_1002 NC_008595.1 939187 940068 R hypothetical protein complement(939187..940068) Mycobacterium avium 104 4530682 YP_880263.1 CDS MAV_1004 NC_008595.1 940261 940761 R hypothetical protein complement(940261..940761) Mycobacterium avium 104 4528677 YP_880264.1 CDS MAV_1005 NC_008595.1 940758 942461 R hypothetical protein complement(940758..942461) Mycobacterium avium 104 4528422 YP_880265.1 CDS MAV_1007 NC_008595.1 942511 943404 D hypothetical protein 942511..943404 Mycobacterium avium 104 4528694 YP_880266.1 CDS MAV_1006 NC_008595.1 943401 943865 R hypothetical protein complement(943401..943865) Mycobacterium avium 104 4526598 YP_880267.1 CDS MAV_1008 NC_008595.1 943889 944164 R hypothetical protein complement(943889..944164) Mycobacterium avium 104 4526160 YP_880268.1 CDS MAV_1009 NC_008595.1 944368 945666 D identified by match to protein family HMM PF00588; match to protein family HMM PF01047; SpoU rRNA methylase 944368..945666 Mycobacterium avium 104 4530036 YP_880269.1 CDS MAV_1011 NC_008595.1 945650 945949 D hypothetical protein 945650..945949 Mycobacterium avium 104 4527017 YP_880270.1 CDS MAV_1010 NC_008595.1 945946 946725 R hypothetical protein complement(945946..946725) Mycobacterium avium 104 4528308 YP_880271.1 CDS MAV_1012 NC_008595.1 946848 947972 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase complement(946848..947972) Mycobacterium avium 104 4529726 YP_880272.1 CDS MAV_1013 NC_008595.1 948228 949238 D hypothetical protein 948228..949238 Mycobacterium avium 104 4529048 YP_880273.1 CDS MAV_1015 NC_008595.1 949316 950956 D identified by match to protein family HMM PF00037; match to protein family HMM PF07992; ferredoxin/ferredoxin--NADP reductase 949316..950956 Mycobacterium avium 104 4530586 YP_880274.1 CDS MAV_1014 NC_008595.1 950953 951429 R identified by match to protein family HMM PF00903; glyoxalase complement(950953..951429) Mycobacterium avium 104 4525741 YP_880275.1 CDS MAV_1016 NC_008595.1 951557 952678 R forms citrate from oxaloacetate and acetyl-CoA; functions in TCA cycle; citrate synthase 2 complement(951557..952678) Mycobacterium avium 104 4529447 YP_880276.1 CDS pdxH NC_008595.1 952789 953412 D catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 952789..953412 Mycobacterium avium 104 4525543 YP_880277.1 CDS MAV_1019 NC_008595.1 954852 956402 R phytoene dehydrogenase complement(954852..956402) Mycobacterium avium 104 4525677 YP_880278.1 CDS MAV_1020 NC_008595.1 956429 956692 R hypothetical protein complement(956429..956692) Mycobacterium avium 104 4526981 YP_880279.1 CDS MAV_1021 NC_008595.1 956792 958129 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(956792..958129) Mycobacterium avium 104 4527636 YP_880280.1 CDS MAV_1022 NC_008595.1 958145 958846 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; PrrA family transcriptional regulator complement(958145..958846) Mycobacterium avium 104 4527296 YP_880281.1 CDS MAV_1023 NC_008595.1 958852 960126 R identified by match to protein family HMM PF07690; MFS transporter complement(958852..960126) Mycobacterium avium 104 4530655 YP_880282.1 CDS MAV_1024 NC_008595.1 960284 961474 D identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family protein 960284..961474 Mycobacterium avium 104 4527058 YP_880283.1 CDS MAV_1025 NC_008595.1 961471 963591 D hypothetical protein 961471..963591 Mycobacterium avium 104 4528504 YP_880284.1 CDS MAV_1028 NC_008595.1 965590 966321 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 965590..966321 Mycobacterium avium 104 4529291 YP_880285.1 CDS MAV_1029 NC_008595.1 966327 967436 D metallo-beta-lactamase 966327..967436 Mycobacterium avium 104 4527528 YP_880286.1 CDS MAV_1030 NC_008595.1 967466 969052 D identified by match to protein family HMM PF00144; penicillin-binding protein 4 967466..969052 Mycobacterium avium 104 4528011 YP_880287.1 CDS MAV_1031 NC_008595.1 969049 971421 D identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; cation-transporting ATPase Exp7 969049..971421 Mycobacterium avium 104 4528377 YP_880288.1 CDS MAV_1032 NC_008595.1 971484 971672 D hypothetical protein 971484..971672 Mycobacterium avium 104 4529449 YP_880289.1 CDS MAV_1033 NC_008595.1 971676 972137 D hypothetical protein 971676..972137 Mycobacterium avium 104 4526731 YP_880290.1 CDS MAV_1034 NC_008595.1 972251 972640 D hypothetical protein 972251..972640 Mycobacterium avium 104 4530711 YP_880291.1 CDS MAV_1035 NC_008595.1 973637 975220 D hypothetical protein 973637..975220 Mycobacterium avium 104 4529708 YP_880292.1 CDS MAV_1036 NC_008595.1 975267 975653 D hypothetical protein 975267..975653 Mycobacterium avium 104 4526871 YP_880293.1 CDS MAV_1037 NC_008595.1 975688 975867 R hypothetical protein complement(975688..975867) Mycobacterium avium 104 4526723 YP_880294.1 CDS MAV_1038 NC_008595.1 976139 976243 R hypothetical protein complement(976139..976243) Mycobacterium avium 104 4526218 YP_880295.1 CDS MAV_1039 NC_008595.1 976490 976777 D hypothetical protein 976490..976777 Mycobacterium avium 104 4529900 YP_880296.1 CDS MAV_1040 NC_008595.1 977169 977321 D hypothetical protein 977169..977321 Mycobacterium avium 104 4526431 YP_880297.1 CDS MAV_1042 NC_008595.1 977654 978472 R hypothetical protein complement(977654..978472) Mycobacterium avium 104 4529023 YP_880298.1 CDS MAV_1043 NC_008595.1 978486 979565 R identified by match to protein family HMM PF05908; hypothetical protein complement(978486..979565) Mycobacterium avium 104 4529985 YP_880299.1 CDS MAV_1044 NC_008595.1 979566 980792 R identified by match to protein family HMM PF01566; match to protein family HMM TIGR01197; manganese transport protein MntH complement(979566..980792) Mycobacterium avium 104 4530562 YP_880300.1 CDS dapB NC_008595.1 980889 981965 R identified by match to protein family HMM PF01113; dihydrodipicolinate reductase N-terminus domain-containing protein complement(980889..981965) Mycobacterium avium 104 4527275 YP_880301.1 CDS MAV_1046 NC_008595.1 981990 982781 R identified by match to protein family HMM PF00106; short chain dehydrogenase complement(981990..982781) Mycobacterium avium 104 4529711 YP_880302.1 CDS pstS NC_008595.1 983274 984383 D identified by match to protein family HMM PF01547; match to protein family HMM TIGR00975; phosphate ABC transporter phosphate-binding protein PstS 983274..984383 Mycobacterium avium 104 4530526 YP_880303.1 CDS pstC NC_008595.1 984390 985376 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter permease 984390..985376 Mycobacterium avium 104 4526730 YP_880304.1 CDS pstA NC_008595.1 985373 986281 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease 985373..986281 Mycobacterium avium 104 4525914 YP_880305.1 CDS MAV_1050 NC_008595.1 986287 987195 R identified by match to protein family HMM PF02735; match to protein family HMM TIGR02772; Ku protein complement(986287..987195) Mycobacterium avium 104 4528854 YP_880306.1 CDS MAV_1051 NC_008595.1 987233 988141 R identified by match to protein family HMM PF00294; kinase, PfkB family protein complement(987233..988141) Mycobacterium avium 104 4530735 YP_880307.1 CDS MAV_1052 NC_008595.1 988138 989550 R identified by match to protein family HMM PF01232; match to protein family HMM PF08125; mannitol 2-dehydrogenase complement(988138..989550) Mycobacterium avium 104 4529635 YP_880308.1 CDS MAV_1053 NC_008595.1 989678 990538 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; hypothetical protein complement(989678..990538) Mycobacterium avium 104 4526017 YP_880309.1 CDS MAV_1054 NC_008595.1 990535 991935 R identified by match to protein family HMM PF01232; match to protein family HMM PF08125; D-mannonate oxidoreductase complement(990535..991935) Mycobacterium avium 104 4528098 YP_880310.1 CDS MAV_1055 NC_008595.1 992070 992237 R hypothetical protein complement(992070..992237) Mycobacterium avium 104 4527090 YP_880311.1 CDS MAV_1056 NC_008595.1 992307 994607 D catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity; ATP-dependent DNA ligase 992307..994607 Mycobacterium avium 104 4527070 YP_880312.1 CDS MAV_1057 NC_008595.1 994604 996541 D identified by match to protein family HMM PF00753; match to protein family HMM PF01557; fumarylacetoacetate hydrolase, putative 994604..996541 Mycobacterium avium 104 4530607 YP_880313.1 CDS MAV_1058 NC_008595.1 996559 997473 R identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein complement(996559..997473) Mycobacterium avium 104 4525519 YP_880314.1 CDS MAV_1059 NC_008595.1 997488 998540 R identified by match to protein family HMM PF01548; match to protein family HMM PF02371; transposase complement(997488..998540) Mycobacterium avium 104 4528089 YP_880315.1 CDS MAV_1060 NC_008595.1 998830 999627 D identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 998830..999627 Mycobacterium avium 104 4529875 YP_880316.1 CDS MAV_1061 NC_008595.1 999662 1000528 R hypothetical protein complement(999662..1000528) Mycobacterium avium 104 4526499 YP_880317.1 CDS MAV_1062 NC_008595.1 1000630 1001328 R identified by match to protein family HMM PF01740; stas domain-containing protein complement(1000630..1001328) Mycobacterium avium 104 4528727 YP_880318.1 CDS MAV_1064 NC_008595.1 1002978 1003928 R hypothetical protein complement(1002978..1003928) Mycobacterium avium 104 4528764 YP_880319.1 CDS cobF NC_008595.1 1004044 1004787 D catalyzes the formation of precorrin 6x from precorrin 5; precorrin 6A synthase 1004044..1004787 Mycobacterium avium 104 4526689 YP_880320.1 CDS MAV_1066 NC_008595.1 1004792 1005655 D identified by match to protein family HMM PF01149; match to protein family HMM PF06831; formamidopyrimidine-DNA glycosylase 1004792..1005655 Mycobacterium avium 104 4529295 YP_880321.1 CDS MAV_1067 NC_008595.1 1005686 1006447 D identified by match to protein family HMM PF00106; short chain dehydrogenase 1005686..1006447 Mycobacterium avium 104 4528838 YP_880322.1 CDS pgi NC_008595.1 1006449 1008113 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(1006449..1008113) Mycobacterium avium 104 4529585 YP_880323.1 CDS MAV_1069 NC_008595.1 1008225 1008497 R identified by match to protein family HMM PF01817; match to protein family HMM TIGR01808; hypothetical protein complement(1008225..1008497) Mycobacterium avium 104 4528531 YP_880324.1 CDS MAV_1070 NC_008595.1 1008771 1008911 D hypothetical protein 1008771..1008911 Mycobacterium avium 104 4528361 YP_880325.1 CDS pcrA NC_008595.1 1008924 1011248 D identified by match to protein family HMM PF00580; match to protein family HMM TIGR01073; ATP-dependent DNA helicase PcrA 1008924..1011248 Mycobacterium avium 104 4528056 YP_880326.1 CDS MAV_1072 NC_008595.1 1011322 1011912 R hypothetical protein complement(1011322..1011912) Mycobacterium avium 104 4527965 YP_880327.1 CDS MAV_1073 NC_008595.1 1011914 1012966 R identified by match to protein family HMM PF01551; M23 peptidase domain-containing protein complement(1011914..1012966) Mycobacterium avium 104 4526546 YP_880328.1 CDS sucC NC_008595.1 1013290 1014453 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1013290..1014453 Mycobacterium avium 104 4527616 YP_880329.1 CDS MAV_1075 NC_008595.1 1014466 1015368 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1014466..1015368 Mycobacterium avium 104 4530201 YP_880330.1 CDS MAV_1076 NC_008595.1 1015429 1016955 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1015429..1016955 Mycobacterium avium 104 4525996 YP_880331.1 CDS MAV_1077 NC_008595.1 1017007 1017840 R identified by match to protein family HMM PF00296; hypothetical protein complement(1017007..1017840) Mycobacterium avium 104 4527546 YP_880332.1 CDS MAV_1078 NC_008595.1 1018099 1019007 D 34 kDa antigenic protein 1018099..1019007 Mycobacterium avium 104 4528372 YP_880333.1 CDS MAV_1079 NC_008595.1 1019054 1020445 D hypothetical protein 1019054..1020445 Mycobacterium avium 104 4527487 YP_880334.1 CDS purN NC_008595.1 1020670 1021299 D glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 1020670..1021299 Mycobacterium avium 104 4525651 YP_880335.1 CDS purH NC_008595.1 1021296 1022897 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1021296..1022897 Mycobacterium avium 104 4525583 YP_880336.1 CDS MAV_1082 NC_008595.1 1023081 1023659 D hypothetical protein 1023081..1023659 Mycobacterium avium 104 4527523 YP_880337.1 CDS MAV_1084 NC_008595.1 1025217 1027133 D von Willebrand factor type A 1025217..1027133 Mycobacterium avium 104 4528072 YP_880338.1 CDS MAV_1085 NC_008595.1 1027182 1028030 D identified by match to protein family HMM PF00248; morphine 6-dehydrogenase 1027182..1028030 Mycobacterium avium 104 4528772 YP_880339.1 CDS MAV_1086 NC_008595.1 1028091 1028696 R identified by match to protein family HMM PF08044; hypothetical protein complement(1028091..1028696) Mycobacterium avium 104 4527794 YP_880340.1 CDS MAV_1087 NC_008595.1 1028827 1029618 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(1028827..1029618) Mycobacterium avium 104 4525769 YP_880341.1 CDS MAV_1088 NC_008595.1 1029623 1030789 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase fadE12 complement(1029623..1030789) Mycobacterium avium 104 4528962 YP_880342.1 CDS MAV_1089 NC_008595.1 1030786 1032777 R identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02785; match to protein family HMM PF02786; carbamoyl-phosphate synthase L subunit complement(1030786..1032777) Mycobacterium avium 104 4526243 YP_880343.1 CDS MAV_1090 NC_008595.1 1032783 1034378 R identified by match to protein family HMM PF01039; acetyl-CoA carboxylase carboxyltransferase complement(1032783..1034378) Mycobacterium avium 104 4528754 YP_880344.1 CDS MAV_1091 NC_008595.1 1034375 1035523 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(1034375..1035523) Mycobacterium avium 104 4529527 YP_880345.1 CDS MAV_1092 NC_008595.1 1035520 1037241 R identified by match to protein family HMM PF07287; hypothetical protein complement(1035520..1037241) Mycobacterium avium 104 4527969 YP_880346.1 CDS rpmF NC_008595.1 1037472 1037645 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1037472..1037645 Mycobacterium avium 104 4525794 YP_880347.1 CDS MAV_1094 NC_008595.1 1037761 1038447 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; two component response transcriptional regulator MprA 1037761..1038447 Mycobacterium avium 104 4526296 YP_880348.1 CDS MAV_1095 NC_008595.1 1038545 1040032 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1038545..1040032 Mycobacterium avium 104 4530118 YP_880349.1 CDS MAV_1096 NC_008595.1 1040115 1041581 D identified by match to protein family HMM PF00089; match to protein family HMM PF00595; protease 1040115..1041581 Mycobacterium avium 104 4528626 YP_880350.1 CDS MAV_1097 NC_008595.1 1041641 1042138 D identified by match to protein family HMM PF00994; match to protein family HMM TIGR00177; molybdenum cofactor synthesis protein 1041641..1042138 Mycobacterium avium 104 4528364 YP_880351.1 CDS mscL NC_008595.1 1042163 1042618 R forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel complement(1042163..1042618) Mycobacterium avium 104 4530574 YP_880352.1 CDS MAV_1099 NC_008595.1 1042686 1043366 R hypothetical protein complement(1042686..1043366) Mycobacterium avium 104 4527465 YP_880353.1 CDS MAV_1100 NC_008595.1 1043431 1043757 R identified by match to protein family HMM TIGR02605; regulatory protein, FmdB family protein complement(1043431..1043757) Mycobacterium avium 104 4527584 YP_880354.1 CDS MAV_1101 NC_008595.1 1043864 1044454 R identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; 5,10-methenyltetrahydrofolate synthetase complement(1043864..1044454) Mycobacterium avium 104 4526559 YP_880355.1 CDS MAV_1102 NC_008595.1 1044546 1045439 D identified by match to protein family HMM PF00483; GalU protein 1044546..1045439 Mycobacterium avium 104 4529913 YP_880356.1 CDS MAV_1103 NC_008595.1 1045567 1046853 D identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis protein moeA 1045567..1046853 Mycobacterium avium 104 4529571 YP_880357.1 CDS MAV_1104 NC_008595.1 1046874 1047527 D identified by match to protein family HMM PF00583; acetyltransferase, GNAT family protein 1046874..1047527 Mycobacterium avium 104 4525627 YP_880358.1 CDS MAV_1105 NC_008595.1 1047772 1048779 D hypothetical protein 1047772..1048779 Mycobacterium avium 104 4527180 YP_880359.1 CDS MAV_1107 NC_008595.1 1049237 1049353 D hypothetical protein 1049237..1049353 Mycobacterium avium 104 4530314 YP_880360.1 CDS MAV_1108 NC_008595.1 1049395 1050441 D hypothetical protein 1049395..1050441 Mycobacterium avium 104 4527823 YP_880361.1 CDS MAV_1109 NC_008595.1 1050448 1051101 D hypothetical protein 1050448..1051101 Mycobacterium avium 104 4527570 YP_880362.1 CDS MAV_1110 NC_008595.1 1051258 1051650 R hypothetical protein complement(1051258..1051650) Mycobacterium avium 104 4527681 YP_880363.1 CDS MAV_1111 NC_008595.1 1051709 1051825 D hypothetical protein 1051709..1051825 Mycobacterium avium 104 4526901 YP_880364.1 CDS MAV_1112 NC_008595.1 1052166 1052309 D hypothetical protein 1052166..1052309 Mycobacterium avium 104 4526664 YP_880365.1 CDS MAV_1113 NC_008595.1 1052416 1053069 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1052416..1053069 Mycobacterium avium 104 4529323 YP_880366.1 CDS MAV_1114 NC_008595.1 1053066 1053560 D hypothetical protein 1053066..1053560 Mycobacterium avium 104 4527511 YP_880367.1 CDS MAV_1115 NC_008595.1 1053569 1054174 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1053569..1054174) Mycobacterium avium 104 4528457 YP_880368.1 CDS MAV_1116 NC_008595.1 1054267 1055436 D identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein 1054267..1055436 Mycobacterium avium 104 4527120 YP_880369.1 CDS MAV_1117 NC_008595.1 1055506 1056639 D identified by match to protein family HMM PF05343; M42 glutamyl aminopeptidase 1055506..1056639 Mycobacterium avium 104 4526146 YP_880370.1 CDS MAV_1118 NC_008595.1 1056776 1057792 D identified by match to protein family HMM PF00288; D-glycero-D-manno-heptose 7-phosphate kinase 1056776..1057792 Mycobacterium avium 104 4526339 YP_880371.1 CDS gmhA NC_008595.1 1057780 1058397 D identified by match to protein family HMM TIGR00441; phosphoheptose isomerase 1057780..1058397 Mycobacterium avium 104 4526995 YP_880372.1 CDS MAV_1120 NC_008595.1 1058406 1058972 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01656; match to protein family HMM TIGR01662; hypothetical protein 1058406..1058972 Mycobacterium avium 104 4527868 YP_880373.1 CDS MAV_1121 NC_008595.1 1059139 1060131 D identified by match to protein family HMM PF00027; match to protein family HMM PF00583; cyclic nucleotide-binding protein 1059139..1060131 Mycobacterium avium 104 4530265 YP_880374.1 CDS MAV_1122 NC_008595.1 1060337 1060999 D hypothetical protein 1060337..1060999 Mycobacterium avium 104 4529389 YP_880375.1 CDS MAV_1123 NC_008595.1 1061027 1061680 D hypothetical protein 1061027..1061680 Mycobacterium avium 104 4527704 YP_880376.1 CDS MAV_1124 NC_008595.1 1061681 1062277 R alkylated DNA repair protein complement(1061681..1062277) Mycobacterium avium 104 4526286 YP_880377.1 CDS arcA NC_008595.1 1062374 1063582 D catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 1062374..1063582 Mycobacterium avium 104 4529573 YP_880378.1 CDS MAV_1126 NC_008595.1 1063664 1065223 R identified by match to protein family HMM PF02366; dolichyl-phosphate-mannose-protein mannosyltransferase complement(1063664..1065223) Mycobacterium avium 104 4530773 YP_880379.1 CDS MAV_1128 NC_008595.1 1065276 1066112 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; hypothetical protein 1065276..1066112 Mycobacterium avium 104 4530135 YP_880380.1 CDS pabB NC_008595.1 1066109 1067359 R catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; aminodeoxychorismate synthase component I complement(1066109..1067359) Mycobacterium avium 104 4528797 YP_880381.1 CDS MAV_1129 NC_008595.1 1067398 1068324 R identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02957; sigma factor complement(1067398..1068324) Mycobacterium avium 104 4529094 YP_880382.1 CDS MAV_1130 NC_008595.1 1068321 1069493 R identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992; dehydrogenase complement(1068321..1069493) Mycobacterium avium 104 4526691 YP_880383.1 CDS MAV_1131 NC_008595.1 1069832 1071520 D hypothetical protein 1069832..1071520 Mycobacterium avium 104 4529631 YP_880384.1 CDS MAV_1132 NC_008595.1 1071648 1073501 D identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254; cyclic diguanylate phosphodiesterase domain-containing protein 1071648..1073501 Mycobacterium avium 104 4527485 YP_880385.1 CDS MAV_1133 NC_008595.1 1073515 1074309 R identified by match to protein family HMM TIGR01444; methyltransferase FkbM complement(1073515..1074309) Mycobacterium avium 104 4528756 YP_880386.1 CDS MAV_1134 NC_008595.1 1074519 1076279 D hypothetical protein 1074519..1076279 Mycobacterium avium 104 4525898 YP_880387.1 CDS MAV_1135 NC_008595.1 1076462 1077925 D identified by match to protein family HMM PF02706; chain length determinant protein 1076462..1077925 Mycobacterium avium 104 4528741 YP_880388.1 CDS MAV_1136 NC_008595.1 1077922 1079412 D identified by match to protein family HMM PF04932; O-antigen polymerase 1077922..1079412 Mycobacterium avium 104 4526601 YP_880389.1 CDS MAV_1137 NC_008595.1 1079428 1080441 D identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family protein 1079428..1080441 Mycobacterium avium 104 4530405 YP_880390.1 CDS MAV_1139 NC_008595.1 1081377 1082177 D hypothetical protein 1081377..1082177 Mycobacterium avium 104 4528897 YP_880391.1 CDS MAV_1140 NC_008595.1 1082499 1083176 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1082499..1083176 Mycobacterium avium 104 4530274 YP_880392.1 CDS MAV_1141 NC_008595.1 1083233 1083928 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1083233..1083928 Mycobacterium avium 104 4525721 YP_880393.1 CDS MAV_1144 NC_008595.1 1086062 1087078 D identified by match to protein family HMM PF01522; polysaccharide deacetylase 1086062..1087078 Mycobacterium avium 104 4529685 YP_880394.1 CDS MAV_1143 NC_008595.1 1087075 1087437 R identified by match to protein family HMM PF00989; two-component sensor histidine kinase protein, putative complement(1087075..1087437) Mycobacterium avium 104 4528003 YP_880395.1 CDS metG NC_008595.1 1087532 1089091 R methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase complement(1087532..1089091) Mycobacterium avium 104 4527945 YP_880396.1 CDS MAV_1146 NC_008595.1 1089111 1089965 D identified by match to protein family HMM PF01026; match to protein family HMM PF04909; match to protein family HMM TIGR00010; hydrolase, TatD family protein 1089111..1089965 Mycobacterium avium 104 4530402 YP_880397.1 CDS MAV_1147 NC_008595.1 1090233 1091255 D identified by match to protein family HMM PF03990; match to protein family HMM PF06737; match to protein family HMM PF07501; resuscitation-promoting factor RpfB 1090233..1091255 Mycobacterium avium 104 4528113 YP_880398.1 CDS ksgA NC_008595.1 1091219 1092175 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1091219..1092175 Mycobacterium avium 104 4528356 YP_880399.1 CDS ispE NC_008595.1 1092247 1093197 D catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1092247..1093197 Mycobacterium avium 104 4530321 YP_880400.1 CDS MAV_1150 NC_008595.1 1093557 1095191 D activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1093557..1095191 Mycobacterium avium 104 4527947 YP_880401.1 CDS pth NC_008595.1 1095266 1095841 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(1095266..1095841) Mycobacterium avium 104 4529232 YP_880402.1 CDS MAV_1152 NC_008595.1 1095854 1096513 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 complement(1095854..1096513) Mycobacterium avium 104 4526491 YP_880403.1 CDS MAV_1153 NC_008595.1 1096650 1097519 R identified by match to protein family HMM PF00106; match to protein family HMM PF07993; retinol dehydrogenase complement(1096650..1097519) Mycobacterium avium 104 4528540 YP_880404.1 CDS MAV_1154 NC_008595.1 1097562 1098221 R LpqT protein complement(1097562..1098221) Mycobacterium avium 104 4526189 YP_880405.1 CDS arsC NC_008595.1 1098218 1098565 R identified by match to protein family HMM PF03960; match to protein family HMM TIGR00014; arsenate reductase complement(1098218..1098565) Mycobacterium avium 104 4529050 YP_880406.1 CDS MAV_1156 NC_008595.1 1098566 1099546 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(1098566..1099546) Mycobacterium avium 104 4530604 YP_880407.1 CDS glmU NC_008595.1 1099659 1101131 R forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(1099659..1101131) Mycobacterium avium 104 4528326 YP_880408.1 CDS MAV_1159 NC_008595.1 1101423 1102082 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1101423..1102082 Mycobacterium avium 104 4528316 YP_880409.1 CDS lysA NC_008595.1 1102159 1103493 R identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048; diaminopimelate decarboxylase complement(1102159..1103493) Mycobacterium avium 104 4526632 YP_880410.1 CDS MAV_1162 NC_008595.1 1107329 1108333 D functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 1107329..1108333 Mycobacterium avium 104 4527141 YP_880411.1 CDS MAV_1163 NC_008595.1 1108638 1109366 D LpqU protein 1108638..1109366 Mycobacterium avium 104 4530466 YP_880412.1 CDS eno NC_008595.1 1109424 1110713 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 1109424..1110713 Mycobacterium avium 104 4529347 YP_880413.1 CDS MAV_1165 NC_008595.1 1110715 1111392 D identified by match to protein family HMM PF04977; septum formation initiator subfamily protein, putative 1110715..1111392 Mycobacterium avium 104 4528790 YP_880414.1 CDS MAV_1166 NC_008595.1 1111445 1111873 D identified by match to protein family HMM PF04417; hypothetical protein 1111445..1111873 Mycobacterium avium 104 4527923 YP_880415.1 CDS MAV_1167 NC_008595.1 1111870 1112817 D identified by match to protein family HMM PF02541; exopolyphosphatase 1111870..1112817 Mycobacterium avium 104 4530400 YP_880416.1 CDS MAV_1168 NC_008595.1 1113029 1113355 D hypothetical protein 1113029..1113355 Mycobacterium avium 104 4529800 YP_880417.1 CDS MAV_1169 NC_008595.1 1113443 1114123 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; KDP operon transcriptional regulator KdpE complement(1113443..1114123) Mycobacterium avium 104 4530432 YP_880418.1 CDS MAV_1170 NC_008595.1 1114173 1116737 R identified by match to protein family HMM PF00512; match to protein family HMM PF00582; match to protein family HMM PF02518; match to protein family HMM PF02702; sensor protein KdpD complement(1114173..1116737) Mycobacterium avium 104 4530517 YP_880419.1 CDS kdpC NC_008595.1 1116762 1117637 R identified by match to protein family HMM PF02669; K+-transporting ATPase, C subunit complement(1116762..1117637) Mycobacterium avium 104 4525717 YP_880420.1 CDS kdpB NC_008595.1 1117639 1119789 R One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B complement(1117639..1119789) Mycobacterium avium 104 4529653 YP_880421.1 CDS kdpA NC_008595.1 1119789 1121459 R catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A complement(1119789..1121459) Mycobacterium avium 104 4527193 YP_880422.1 CDS MAV_1174 NC_008595.1 1121546 1121629 R potassium-transporting ATPase, F subunit, putative complement(1121546..1121629) Mycobacterium avium 104 4526539 YP_880423.1 CDS MAV_1175 NC_008595.1 1121820 1123358 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; two component sensor histidine kinase trcs complement(1121820..1123358) Mycobacterium avium 104 4526299 YP_880424.1 CDS MAV_1176 NC_008595.1 1123355 1124119 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; TrcR family transcriptional regulator complement(1123355..1124119) Mycobacterium avium 104 4526881 YP_880425.1 CDS MAV_1177 NC_008595.1 1124339 1124623 R identified by match to protein family HMM PF06359; hypothetical protein complement(1124339..1124623) Mycobacterium avium 104 4527608 YP_880426.1 CDS MAV_1178 NC_008595.1 1124666 1124962 R identified by match to protein family HMM PF06013; hypothetical protein complement(1124666..1124962) Mycobacterium avium 104 4526392 YP_880427.1 CDS MAV_1181 NC_008595.1 1127854 1129065 D hypothetical protein 1127854..1129065 Mycobacterium avium 104 4530276 YP_880428.1 CDS MAV_1182 NC_008595.1 1129130 1129927 D hypothetical protein 1129130..1129927 Mycobacterium avium 104 4525818 YP_880429.1 CDS MAV_1183 NC_008595.1 1129937 1130095 D hypothetical protein 1129937..1130095 Mycobacterium avium 104 4528753 YP_880430.1 CDS MAV_1184 NC_008595.1 1130104 1130874 D identified by match to protein family HMM PF04248; hypothetical protein 1130104..1130874 Mycobacterium avium 104 4526736 YP_880431.1 CDS MAV_1185 NC_008595.1 1131175 1132362 D identified by match to protein family HMM TIGR02276; hypothetical protein 1131175..1132362 Mycobacterium avium 104 4526587 YP_880432.1 CDS MAV_1186 NC_008595.1 1132524 1134155 D activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1132524..1134155 Mycobacterium avium 104 4529348 YP_880433.1 CDS MAV_1187 NC_008595.1 1134169 1134642 D hypothetical protein 1134169..1134642 Mycobacterium avium 104 4525822 YP_880434.1 CDS MAV_1188 NC_008595.1 1134671 1135558 D identified by match to protein family HMM PF00310; glutamine amidotransferase, class-II 1134671..1135558 Mycobacterium avium 104 4527865 YP_880435.1 CDS MAV_1189 NC_008595.1 1135583 1136452 D identified by match to protein family HMM PF01734; phospholipase, patatin family protein 1135583..1136452 Mycobacterium avium 104 4526580 YP_880436.1 CDS MAV_1190 NC_008595.1 1136478 1137515 R identified by match to protein family HMM PF01734; patatin complement(1136478..1137515) Mycobacterium avium 104 4530665 YP_880437.1 CDS MAV_1191 NC_008595.1 1137684 1138091 R LpqV protein complement(1137684..1138091) Mycobacterium avium 104 4527068 YP_880438.1 CDS MAV_1192 NC_008595.1 1138255 1138848 D identified by match to protein family HMM PF05995; cysteine dioxygenase type I superfamily protein 1138255..1138848 Mycobacterium avium 104 4525772 YP_880439.1 CDS MAV_1194 NC_008595.1 1138848 1139285 D hypothetical protein 1138848..1139285 Mycobacterium avium 104 4527215 YP_880440.1 CDS MAV_1193 NC_008595.1 1139282 1141066 R hypothetical protein complement(1139282..1141066) Mycobacterium avium 104 4526756 YP_880441.1 CDS MAV_1195 NC_008595.1 1141076 1141867 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(1141076..1141867) Mycobacterium avium 104 4529755 YP_880442.1 CDS MAV_1196 NC_008595.1 1141881 1142918 R catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase complement(1141881..1142918) Mycobacterium avium 104 4526439 YP_880443.1 CDS MAV_1197 NC_008595.1 1143217 1143984 D identified by match to protein family HMM PF06539; permease of the major facilitator superfamily protein 1143217..1143984 Mycobacterium avium 104 4530681 YP_880444.1 CDS MAV_1198 NC_008595.1 1144188 1145405 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(1144188..1145405) Mycobacterium avium 104 4530616 YP_880445.1 CDS MAV_1199 NC_008595.1 1145496 1146470 R identified by match to protein family HMM PF00657; hypothetical protein complement(1145496..1146470) Mycobacterium avium 104 4529866 YP_880446.1 CDS MAV_1200 NC_008595.1 1146702 1147766 D identified by match to protein family HMM PF07859; alpha/beta hydrolase 1146702..1147766 Mycobacterium avium 104 4529134 YP_880447.1 CDS MAV_1201 NC_008595.1 1147809 1149215 D identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137; cystathionine beta-synthase 1147809..1149215 Mycobacterium avium 104 4528812 YP_880448.1 CDS MAV_1202 NC_008595.1 1149306 1150025 D identified by match to protein family HMM PF06271; Pra protein 1149306..1150025 Mycobacterium avium 104 4530337 YP_880449.1 CDS MAV_1203 NC_008595.1 1150063 1151229 D catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; cystathionine gamma-synthase 1150063..1151229 Mycobacterium avium 104 4527543 YP_880450.1 CDS greA NC_008595.1 1151248 1151727 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(1151248..1151727) Mycobacterium avium 104 4530615 YP_880451.1 CDS MAV_1205 NC_008595.1 1151963 1152388 R hypothetical protein complement(1151963..1152388) Mycobacterium avium 104 4528357 YP_880452.1 CDS MAV_1206 NC_008595.1 1152499 1153371 D identified by match to protein family HMM PF02585; mycothiol conjugate amidase Mca 1152499..1153371 Mycobacterium avium 104 4528709 YP_880453.1 CDS MAV_1207 NC_008595.1 1153368 1153688 D hypothetical protein 1153368..1153688 Mycobacterium avium 104 4526892 YP_880454.1 CDS MAV_1208 NC_008595.1 1153675 1155690 D identified by match to protein family HMM PF03190; hypothetical protein 1153675..1155690 Mycobacterium avium 104 4529008 YP_880455.1 CDS MAV_1209 NC_008595.1 1155712 1156095 D identified by match to protein family HMM PF02136; steroid delta-isomerase 1155712..1156095 Mycobacterium avium 104 4530524 YP_880456.1 CDS MAV_1210 NC_008595.1 1156105 1156878 R identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065; channel protein, hemolysin III family protein complement(1156105..1156878) Mycobacterium avium 104 4528401 YP_880457.1 CDS MAV_1211 NC_008595.1 1157051 1157845 D identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; short chain Z-isoprenyl diphosphate synthetase 1157051..1157845 Mycobacterium avium 104 4526591 YP_880458.1 CDS MAV_1212 NC_008595.1 1157900 1159270 D hypothetical protein 1157900..1159270 Mycobacterium avium 104 4530243 YP_880459.1 CDS MAV_1213 NC_008595.1 1159517 1159942 D hypothetical protein 1159517..1159942 Mycobacterium avium 104 4529353 YP_880460.1 CDS coaA NC_008595.1 1159962 1160870 R catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase complement(1159962..1160870) Mycobacterium avium 104 4529999 YP_880461.1 CDS glyA NC_008595.1 1160977 1162308 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1160977..1162308 Mycobacterium avium 104 4530323 YP_880462.1 CDS MAV_1216 NC_008595.1 1162396 1163223 D identified by match to protein family HMM PF03405; Fatty acid desaturase 1162396..1163223 Mycobacterium avium 104 4530350 YP_880463.1 CDS MAV_1217 NC_008595.1 1163443 1164744 D identified by match to protein family HMM PF02562; PhoH2 protein 1163443..1164744 Mycobacterium avium 104 4530780 YP_880464.1 CDS MAV_1218 NC_008595.1 1164872 1165747 D identified by match to protein family HMM PF01522; carbohydrate degrading enzyme 1164872..1165747 Mycobacterium avium 104 4529550 YP_880465.1 CDS MAV_1220 NC_008595.1 1165812 1167245 D identified by match to protein family HMM PF00211; match to protein family HMM PF00672; adenylate cyclase, family protein 3 1165812..1167245 Mycobacterium avium 104 4528676 YP_880466.1 CDS MAV_1219 NC_008595.1 1167242 1168261 R hypothetical protein complement(1167242..1168261) Mycobacterium avium 104 4529806 YP_880467.1 CDS fumC NC_008595.1 1168310 1169722 R class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase complement(1168310..1169722) Mycobacterium avium 104 4526669 YP_880468.1 CDS glpX NC_008595.1 1169753 1170832 R type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II complement(1169753..1170832) Mycobacterium avium 104 4525706 YP_880469.1 CDS MAV_1223 NC_008595.1 1170888 1171574 D hypothetical protein 1170888..1171574 Mycobacterium avium 104 4529769 YP_880470.1 CDS MAV_1224 NC_008595.1 1171588 1172391 D dienelactone hydrolase 1171588..1172391 Mycobacterium avium 104 4526308 YP_880471.1 CDS MAV_1226 NC_008595.1 1172473 1174017 D identified by match to protein family HMM PF00135; carboxylesterase 1172473..1174017 Mycobacterium avium 104 4530188 YP_880472.1 CDS MAV_1225 NC_008595.1 1174014 1175114 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; 3-beta hydroxysteroid dehydrogenase/isomerase complement(1174014..1175114) Mycobacterium avium 104 4526256 YP_880473.1 CDS xseB NC_008595.1 1175176 1175424 R catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit complement(1175176..1175424) Mycobacterium avium 104 4527039 YP_880474.1 CDS xseA NC_008595.1 1175414 1176553 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(1175414..1176553) Mycobacterium avium 104 4527664 YP_880475.1 CDS MAV_1229 NC_008595.1 1176658 1177254 R hypothetical protein complement(1176658..1177254) Mycobacterium avium 104 4527166 YP_880476.1 CDS ispH NC_008595.1 1177452 1178342 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1177452..1178342 Mycobacterium avium 104 4530804 YP_880477.1 CDS MAV_1231 NC_008595.1 1178359 1179465 R hypothetical protein complement(1178359..1179465) Mycobacterium avium 104 4530621 YP_880478.1 CDS ychF NC_008595.1 1179704 1180756 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 1179704..1180756 Mycobacterium avium 104 4526408 YP_880479.1 CDS MAV_1233 NC_008595.1 1180947 1181222 D transposase 1180947..1181222 Mycobacterium avium 104 4529324 YP_880480.1 CDS MAV_1235 NC_008595.1 1182242 1183516 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 1182242..1183516 Mycobacterium avium 104 4528759 YP_880481.1 CDS MAV_1236 NC_008595.1 1183823 1184032 D identified by match to protein family HMM PF01844; HNH endonuclease, putative 1183823..1184032 Mycobacterium avium 104 4527030 YP_880482.1 CDS MAV_1237 NC_008595.1 1184295 1185599 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(1184295..1185599) Mycobacterium avium 104 4527290 YP_880483.1 CDS MAV_1238 NC_008595.1 1185708 1186970 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(1185708..1186970) Mycobacterium avium 104 4525787 YP_880484.1 CDS MAV_1239 NC_008595.1 1187107 1187313 D identified by similarity to RF:ZP_00993826.1; hypothetical protein 1187107..1187313 Mycobacterium avium 104 4527312 YP_880485.1 CDS MAV_1240 NC_008595.1 1187300 1187671 D identified by match to protein family HMM PF01850; PilT domain-containing protein 1187300..1187671 Mycobacterium avium 104 4526461 YP_880486.1 CDS MAV_1241 NC_008595.1 1187804 1188211 D identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 1187804..1188211 Mycobacterium avium 104 4526422 YP_880487.1 CDS MAV_1242 NC_008595.1 1188277 1189014 R identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase SDR complement(1188277..1189014) Mycobacterium avium 104 4530538 YP_880488.1 CDS MAV_1243 NC_008595.1 1189110 1189715 D identified by match to protein family HMM PF00440; transcriptional regulator 1189110..1189715 Mycobacterium avium 104 4529535 YP_880489.1 CDS MAV_1244 NC_008595.1 1189817 1190215 D identified by match to protein family HMM PF00903; glyoxalase 1189817..1190215 Mycobacterium avium 104 4527763 YP_880490.1 CDS MAV_1245 NC_008595.1 1190284 1190667 D secreted protein antigen 1190284..1190667 Mycobacterium avium 104 4526895 YP_880491.1 CDS MAV_1246 NC_008595.1 1190737 1191069 D hypothetical protein 1190737..1191069 Mycobacterium avium 104 4526551 YP_880492.1 CDS MAV_1247 NC_008595.1 1191364 1191774 D hypothetical protein 1191364..1191774 Mycobacterium avium 104 4528538 YP_880493.1 CDS MAV_1248 NC_008595.1 1192185 1192508 D identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase 1192185..1192508 Mycobacterium avium 104 4528881 YP_880494.1 CDS MAV_1249 NC_008595.1 1192513 1193196 R hypothetical protein complement(1192513..1193196) Mycobacterium avium 104 4525660 YP_880495.1 CDS MAV_1251 NC_008595.1 1193323 1193511 D hypothetical protein 1193323..1193511 Mycobacterium avium 104 4527979 YP_880496.1 CDS MAV_1250 NC_008595.1 1193469 1194287 R identified by match to protein family HMM PF00211; adenylate and guanylate cyclase catalytic domain-containing protein complement(1193469..1194287) Mycobacterium avium 104 4526896 YP_880497.1 CDS zwf NC_008595.1 1194419 1195828 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 1194419..1195828 Mycobacterium avium 104 4526139 YP_880498.1 CDS gnd NC_008595.1 1195845 1196867 D similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 1195845..1196867 Mycobacterium avium 104 4529964 YP_880499.1 CDS MAV_1254 NC_008595.1 1196881 1197714 R identified by match to protein family HMM PF00561; alpha/beta hydrolase complement(1196881..1197714) Mycobacterium avium 104 4526999 YP_880500.1 CDS MAV_1255 NC_008595.1 1197866 1198339 D identified by match to protein family HMM PF06983; 3-demethylubiquinone-9 3-methyltransferase 1197866..1198339 Mycobacterium avium 104 4530491 YP_880501.1 CDS MAV_1256 NC_008595.1 1198445 1199359 D identified by match to protein family HMM PF00561; alpha/beta hydrolase 1198445..1199359 Mycobacterium avium 104 4529865 YP_880502.1 CDS MAV_1257 NC_008595.1 1199375 1200601 D identified by match to protein family HMM PF03007; hypothetical protein 1199375..1200601 Mycobacterium avium 104 4528413 YP_880503.1 CDS MAV_1258 NC_008595.1 1200602 1201207 R hypothetical protein complement(1200602..1201207) Mycobacterium avium 104 4530043 YP_880504.1 CDS MAV_1259 NC_008595.1 1201204 1202769 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase complement(1201204..1202769) Mycobacterium avium 104 4526280 YP_880505.1 CDS MAV_1260 NC_008595.1 1202986 1203495 D identified by match to protein family HMM PF07681; DoxX subfamily protein, putative 1202986..1203495 Mycobacterium avium 104 4528564 YP_880506.1 CDS MAV_1261 NC_008595.1 1203664 1205412 D hypothetical protein 1203664..1205412 Mycobacterium avium 104 4529396 YP_880507.1 CDS metE NC_008595.1 1205460 1207730 R catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase complement(1205460..1207730) Mycobacterium avium 104 4525831 YP_880508.1 CDS MAV_1263 NC_008595.1 1208176 1208805 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; NAD dependent epimerase/dehydratase complement(1208176..1208805) Mycobacterium avium 104 4529749 YP_880509.1 CDS MAV_1264 NC_008595.1 1208843 1209685 R identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase complement(1208843..1209685) Mycobacterium avium 104 4529028 YP_880510.1 CDS MAV_1265 NC_008595.1 1209788 1211077 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1209788..1211077) Mycobacterium avium 104 4530601 YP_880511.1 CDS MAV_1266 NC_008595.1 1211216 1211863 R identified by match to protein family HMM PF00881; nitroreductase complement(1211216..1211863) Mycobacterium avium 104 4525774 YP_880512.1 CDS MAV_1267 NC_008595.1 1211863 1212963 R identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain-containing protein complement(1211863..1212963) Mycobacterium avium 104 4530614 YP_880513.1 CDS MAV_1268 NC_008595.1 1212960 1214129 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase domain-containing protein complement(1212960..1214129) Mycobacterium avium 104 4527891 YP_880514.1 CDS MAV_1269 NC_008595.1 1214341 1216056 D identified by match to protein family HMM PF00092; von Willebrand factor type A 1214341..1216056 Mycobacterium avium 104 4528396 YP_880515.1 CDS MAV_1270 NC_008595.1 1216070 1216912 D identified by match to protein family HMM PF07728; denitrification regulatory protein nirQ 1216070..1216912 Mycobacterium avium 104 4529624 YP_880516.1 CDS MAV_1271 NC_008595.1 1216995 1218113 D hypothetical protein 1216995..1218113 Mycobacterium avium 104 4529819 YP_880517.1 CDS MAV_1272 NC_008595.1 1218118 1219263 D hypothetical protein 1218118..1219263 Mycobacterium avium 104 4527835 YP_880518.1 CDS MAV_1273 NC_008595.1 1219256 1220281 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; NAD dependent epimerase/dehydratase 1219256..1220281 Mycobacterium avium 104 4530713 YP_880519.1 CDS MAV_1274 NC_008595.1 1220284 1221498 D identified by match to protein family HMM PF00067; cytochrome P450 superfamily protein 1220284..1221498 Mycobacterium avium 104 4527305 YP_880520.1 CDS MAV_1275 NC_008595.1 1221625 1223073 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase 1221625..1223073 Mycobacterium avium 104 4526095 YP_880521.1 CDS MAV_1276 NC_008595.1 1223530 1224678 D identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; acetyl-CoA acetyltransferase 1223530..1224678 Mycobacterium avium 104 4526572 YP_880522.1 CDS MAV_1277 NC_008595.1 1224675 1225466 D identified by match to protein family HMM PF00378; carnitinyl-CoA dehydratase 1224675..1225466 Mycobacterium avium 104 4526014 YP_880523.1 CDS MAV_1278 NC_008595.1 1225476 1226489 R identified by match to protein family HMM PF01494; oxidoreductase complement(1225476..1226489) Mycobacterium avium 104 4528579 YP_880524.1 CDS MAV_1279 NC_008595.1 1226539 1227039 R identified by match to protein family HMM PF04140; isoprenylcysteine carboxyl methyltransferase (icmt) family protein complement(1226539..1227039) Mycobacterium avium 104 4525859 YP_880525.1 CDS MAV_1280 NC_008595.1 1227060 1228109 R identified by match to protein family HMM PF00195; match to protein family HMM PF02797; transferase complement(1227060..1228109) Mycobacterium avium 104 4527538 YP_880526.1 CDS MAV_1281 NC_008595.1 1228395 1229543 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF05368; hypothetical protein 1228395..1229543 Mycobacterium avium 104 4528886 YP_880527.1 CDS MAV_1282 NC_008595.1 1229540 1230262 D identified by match to protein family HMM PF02517; caax amino protease 1229540..1230262 Mycobacterium avium 104 4526174 YP_880528.1 CDS MAV_1283 NC_008595.1 1230296 1231108 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(1230296..1231108) Mycobacterium avium 104 4530546 YP_880529.1 CDS MAV_1284 NC_008595.1 1231228 1232310 D identified by match to protein family HMM PF02515; Mcr protein 1231228..1232310 Mycobacterium avium 104 4530225 YP_880530.1 CDS MAV_1285 NC_008595.1 1232373 1233137 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; 3-hydroxyacyl-CoA dehydrogenase 1232373..1233137 Mycobacterium avium 104 4529318 YP_880531.1 CDS MAV_1286 NC_008595.1 1233273 1233395 R hypothetical protein complement(1233273..1233395) Mycobacterium avium 104 4526110 YP_880532.1 CDS MAV_1287 NC_008595.1 1233708 1236134 D mmpL protein 1233708..1236134 Mycobacterium avium 104 4530438 YP_880533.1 CDS MAV_1288 NC_008595.1 1236131 1236766 D hypothetical protein 1236131..1236766 Mycobacterium avium 104 4526086 YP_880534.1 CDS MAV_1289 NC_008595.1 1236774 1237475 R Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase complement(1236774..1237475) Mycobacterium avium 104 4528174 YP_880535.1 CDS MAV_1290 NC_008595.1 1237525 1237890 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 1237525..1237890 Mycobacterium avium 104 4529760 YP_880536.1 CDS MAV_1291 NC_008595.1 1237942 1238502 R identified by match to protein family HMM PF08002; hypothetical protein complement(1237942..1238502) Mycobacterium avium 104 4529579 YP_880537.1 CDS MAV_1292 NC_008595.1 1238541 1238984 D identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 1238541..1238984 Mycobacterium avium 104 4525622 YP_880538.1 CDS MAV_1293 NC_008595.1 1239043 1239267 D hypothetical protein 1239043..1239267 Mycobacterium avium 104 4529181 YP_880539.1 CDS MAV_1294 NC_008595.1 1239429 1240004 D identified by match to protein family HMM PF00730; base excision DNA repair protein, HhH-GPD family protein 1239429..1240004 Mycobacterium avium 104 4529511 YP_880540.1 CDS MAV_1295 NC_008595.1 1240033 1240179 D hypothetical protein 1240033..1240179 Mycobacterium avium 104 4528648 YP_880541.1 CDS MAV_1296 NC_008595.1 1240243 1241322 R hypothetical protein complement(1240243..1241322) Mycobacterium avium 104 4528959 YP_880542.1 CDS MAV_1297 NC_008595.1 1241370 1241960 R hypothetical protein complement(1241370..1241960) Mycobacterium avium 104 4530333 YP_880543.1 CDS pimE NC_008595.1 1242335 1243519 D involved in the fifth mannose transfer of phosphatidylinositol mannoside synthesis; mannosyltransferase 1242335..1243519 Mycobacterium avium 104 4530723 YP_880544.1 CDS phhB NC_008595.1 1243582 1243866 R 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase complement(1243582..1243866) Mycobacterium avium 104 4529853 YP_880545.1 CDS MAV_1300 NC_008595.1 1243997 1244770 R hypothetical protein complement(1243997..1244770) Mycobacterium avium 104 4526133 YP_880546.1 CDS MAV_1301 NC_008595.1 1244910 1245332 D identified by match to protein family HMM PF00293; hydrolase, NUDIX family protein 1244910..1245332 Mycobacterium avium 104 4525661 YP_880547.1 CDS MAV_1302 NC_008595.1 1245544 1245768 R hypothetical protein complement(1245544..1245768) Mycobacterium avium 104 4530401 YP_880548.1 CDS MAV_1303 NC_008595.1 1245751 1249443 D identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01580; nitrate reductase, alpha subunit 1245751..1249443 Mycobacterium avium 104 4528719 YP_880549.1 CDS narH NC_008595.1 1249445 1251061 D identified by match to protein family HMM TIGR01660; nitrate reductase, beta subunit 1249445..1251061 Mycobacterium avium 104 4529919 YP_880550.1 CDS narJ NC_008595.1 1251058 1251741 D identified by match to protein family HMM PF02613; match to protein family HMM TIGR00684; nitrate reductase molybdenum cofactor assembly chaperone 1251058..1251741 Mycobacterium avium 104 4527432 YP_880551.1 CDS narI NC_008595.1 1251734 1252465 D identified by match to protein family HMM PF02665; match to protein family HMM TIGR00351; respiratory nitrate reductase, gamma subunit 1251734..1252465 Mycobacterium avium 104 4527677 YP_880552.1 CDS typA NC_008595.1 1252636 1254525 D identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA/BipA 1252636..1254525 Mycobacterium avium 104 4527113 YP_880553.1 CDS MAV_1308 NC_008595.1 1254533 1256476 D identified by match to protein family HMM PF00496; extracellular solute-binding protein, family protein 5 1254533..1256476 Mycobacterium avium 104 4526451 YP_880554.1 CDS MAV_1309 NC_008595.1 1256477 1257169 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1256477..1257169) Mycobacterium avium 104 4529588 YP_880555.1 CDS MAV_1310 NC_008595.1 1257168 1258070 D identified by match to protein family HMM PF02585; N-Acetyl-1-D-myo-Inosityl-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase MshB 1257168..1258070 Mycobacterium avium 104 4530385 YP_880556.1 CDS MAV_1311 NC_008595.1 1258163 1258624 D hypothetical protein 1258163..1258624 Mycobacterium avium 104 4527549 YP_880557.1 CDS fbiC NC_008595.1 1258777 1261380 D 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; catalyzes radical-mediated transfer of hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); functions in F420 biosynthesis; FO synthase 1258777..1261380 Mycobacterium avium 104 4527530 YP_880558.1 CDS MAV_1313 NC_008595.1 1261420 1262193 D hypothetical protein 1261420..1262193 Mycobacterium avium 104 4529474 YP_880559.1 CDS MAV_1314 NC_008595.1 1262218 1262550 R hypothetical protein complement(1262218..1262550) Mycobacterium avium 104 4529252 YP_880560.1 CDS MAV_1315 NC_008595.1 1262652 1262777 D hypothetical protein 1262652..1262777 Mycobacterium avium 104 4526904 YP_880561.1 CDS MAV_1316 NC_008595.1 1262943 1263269 D identified by match to protein family HMM PF00037; ferredoxin 1262943..1263269 Mycobacterium avium 104 4527928 YP_880562.1 CDS MAV_1317 NC_008595.1 1263278 1264396 D catalyzes the formation of N-succinyl-LL-2,6-diaminopimelate from N-succinyl-L-2-amino-6-oxopimelate in lysine biosynthesis; N-succinyldiaminopimelate aminotransferase 1263278..1264396 Mycobacterium avium 104 4530802 YP_880563.1 CDS MAV_1318 NC_008595.1 1264478 1266862 D identified by match to protein family HMM PF01336; OB-fold nucleic acid binding domain-containing protein 1264478..1266862 Mycobacterium avium 104 4525565 YP_880564.1 CDS MAV_1319 NC_008595.1 1266978 1267211 R hypothetical protein complement(1266978..1267211) Mycobacterium avium 104 4526993 YP_880565.1 CDS MAV_1321 NC_008595.1 1267227 1273496 D identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; mycocerosic acid synthase 1267227..1273496 Mycobacterium avium 104 4526019 YP_880566.1 CDS MAV_1320 NC_008595.1 1273493 1273738 R hypothetical protein complement(1273493..1273738) Mycobacterium avium 104 4525588 YP_880567.1 CDS MAV_1323 NC_008595.1 1273905 1274108 D hypothetical protein 1273905..1274108 Mycobacterium avium 104 4526529 YP_880568.1 CDS MAV_1322 NC_008595.1 1274105 1275196 R identified by match to protein family HMM PF00823; PPE family protein complement(1274105..1275196) Mycobacterium avium 104 4528341 YP_880569.1 CDS MAV_1324 NC_008595.1 1275232 1276419 R identified by match to protein family HMM PF00823; PPE family protein complement(1275232..1276419) Mycobacterium avium 104 4525819 YP_880570.1 CDS cysC NC_008595.1 1277231 1277923 D identified by match to protein family HMM PF01583; match to protein family HMM TIGR00455; adenylylsulfate kinase 1277231..1277923 Mycobacterium avium 104 4527452 YP_880571.1 CDS sat NC_008595.1 1277920 1279179 D ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms; sulfate adenylyltransferase 1277920..1279179 Mycobacterium avium 104 4526048 YP_880572.1 CDS MAV_1327 NC_008595.1 1279176 1279508 D hypothetical protein 1279176..1279508 Mycobacterium avium 104 4526778 YP_880573.1 CDS MAV_1328 NC_008595.1 1279519 1281258 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(1279519..1281258) Mycobacterium avium 104 4530099 YP_880574.1 CDS MAV_1329 NC_008595.1 1281367 1283034 R identified by match to protein family HMM PF00823; PPE family protein complement(1281367..1283034) Mycobacterium avium 104 4529701 YP_880575.1 CDS MAV_1330 NC_008595.1 1283388 1284980 R hypothetical protein complement(1283388..1284980) Mycobacterium avium 104 4526944 YP_880576.1 CDS pruA NC_008595.1 1285038 1286705 D identified by match to protein family HMM PF00171; match to protein family HMM TIGR01236; 1-pyrroline-5-carboxylate dehydrogenase 1285038..1286705 Mycobacterium avium 104 4529638 YP_880577.1 CDS MAV_1332 NC_008595.1 1286705 1287667 D identified by match to protein family HMM PF01619; proline dehydrogenase 1286705..1287667 Mycobacterium avium 104 4526888 YP_880578.1 CDS MAV_1333 NC_008595.1 1287760 1288362 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1287760..1288362) Mycobacterium avium 104 4529157 YP_880579.1 CDS MAV_1334 NC_008595.1 1288383 1289552 R lipid-transfer protein complement(1288383..1289552) Mycobacterium avium 104 4525878 YP_880580.1 CDS MAV_1335 NC_008595.1 1289549 1290010 R hypothetical protein complement(1289549..1290010) Mycobacterium avium 104 4527354 YP_880581.1 CDS MAV_1336 NC_008595.1 1290007 1291128 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain-containing protein complement(1290007..1291128) Mycobacterium avium 104 4529652 YP_880582.1 CDS MAV_1338 NC_008595.1 1292105 1293289 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; acyl-CoA dehydrogenase complement(1292105..1293289) Mycobacterium avium 104 4528165 YP_880583.1 CDS MAV_1339 NC_008595.1 1293294 1294490 R identified by match to protein family HMM PF00067; cytochrome P450 superfamily protein complement(1293294..1294490) Mycobacterium avium 104 4527978 YP_880584.1 CDS MAV_1340 NC_008595.1 1294685 1296145 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase 1294685..1296145 Mycobacterium avium 104 4529360 YP_880585.1 CDS MAV_1341 NC_008595.1 1296142 1298433 D identified by match to protein family HMM PF02515; caib/baif family protein 1296142..1298433 Mycobacterium avium 104 4527526 YP_880586.1 CDS MAV_1342 NC_008595.1 1298494 1299402 D identified by match to protein family HMM PF00561; hydrolase, alpha/beta hydrolase family protein 1298494..1299402 Mycobacterium avium 104 4526155 YP_880587.1 CDS MAV_1343 NC_008595.1 1299432 1300853 D activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 1299432..1300853 Mycobacterium avium 104 4526532 YP_880588.1 CDS MAV_1344 NC_008595.1 1300972 1302306 D identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family protein transporter 1300972..1302306 Mycobacterium avium 104 4527460 YP_880589.1 CDS MAV_1345 NC_008595.1 1302308 1303261 R tetrahydropicolinate succinylase complement(1302308..1303261) Mycobacterium avium 104 4526603 YP_880590.1 CDS MAV_1346 NC_008595.1 1303581 1304417 D identified by match to protein family HMM PF00934; PE family protein 1303581..1304417 Mycobacterium avium 104 4528534 YP_880591.1 CDS MAV_1347 NC_008595.1 1304443 1305594 D identified by match to protein family HMM PF00823; PPE family protein 1304443..1305594 Mycobacterium avium 104 4527050 YP_880592.1 CDS dapE NC_008595.1 1305644 1306708 D catalyzes the formation of succinate and diaminoheptanedioate from succinyldiaminoheptanedioate; succinyl-diaminopimelate desuccinylase 1305644..1306708 Mycobacterium avium 104 4530227 YP_880593.1 CDS MAV_1348 NC_008595.1 1306693 1308831 R identified by match to protein family HMM PF07721; TPR repeat-containing protein complement(1306693..1308831) Mycobacterium avium 104 4526931 YP_880594.1 CDS MAV_1350 NC_008595.1 1308920 1309483 D identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730; hypothetical protein 1308920..1309483 Mycobacterium avium 104 4525881 YP_880595.1 CDS MAV_1351 NC_008595.1 1309626 1311404 D activates fatty acids by binding to coenzyme A; may be involved in acyclic terpene utilization; long-chain-acyl-CoA synthetase 1309626..1311404 Mycobacterium avium 104 4530291 YP_880596.1 CDS folP NC_008595.1 1311460 1312335 D identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 1311460..1312335 Mycobacterium avium 104 4525873 YP_880597.1 CDS MAV_1353 NC_008595.1 1312332 1313321 D identified by match to protein family HMM PF00535; glucosyl-3-phosphoglycerate synthase 1312332..1313321 Mycobacterium avium 104 4530250 YP_880598.1 CDS MAV_1354 NC_008595.1 1313373 1313723 D hypothetical protein 1313373..1313723 Mycobacterium avium 104 4529285 YP_880599.1 CDS MAV_1355 NC_008595.1 1313726 1314307 D identified by match to protein family HMM PF03352; match to protein family HMM TIGR00624; DNA-3-methyladenine glycosylase I 1313726..1314307 Mycobacterium avium 104 4530218 YP_880600.1 CDS MAV_1356 NC_008595.1 1314474 1314647 D hypothetical protein 1314474..1314647 Mycobacterium avium 104 4526081 YP_880601.1 CDS MAV_1357 NC_008595.1 1314677 1315957 R identified by match to protein family HMM PF00534; match to protein family HMM TIGR02149; glycogen synthase complement(1314677..1315957) Mycobacterium avium 104 4529362 YP_880602.1 CDS glgC NC_008595.1 1316039 1317235 D catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 1316039..1317235 Mycobacterium avium 104 4527078 YP_880603.1 CDS MAV_1359 NC_008595.1 1317315 1319009 R identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976; hydrolase CocE/NonD family protein complement(1317315..1319009) Mycobacterium avium 104 4530051 YP_880604.1 CDS MAV_1360 NC_008595.1 1319039 1319713 R identified by match to protein family HMM PF04140; isoprenylcysteine carboxyl methyltransferase (icmt) family protein complement(1319039..1319713) Mycobacterium avium 104 4529040 YP_880605.1 CDS MAV_1361 NC_008595.1 1319723 1321366 R ABC transporter transmembrane protein complement(1319723..1321366) Mycobacterium avium 104 4527775 YP_880606.1 CDS MAV_1362 NC_008595.1 1321363 1322307 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1321363..1322307) Mycobacterium avium 104 4527372 YP_880607.1 CDS MAV_1363 NC_008595.1 1322297 1322944 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1322297..1322944) Mycobacterium avium 104 4528474 YP_880608.1 CDS MAV_1364 NC_008595.1 1323101 1323769 R identified by match to protein family HMM PF01596; match to protein family HMM PF05175; O-methyltransferase, family protein 3 complement(1323101..1323769) Mycobacterium avium 104 4527091 YP_880609.1 CDS MAV_1365 NC_008595.1 1323971 1325245 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase sigma-70 factor 1323971..1325245 Mycobacterium avium 104 4526076 YP_880610.1 CDS MAV_1366 NC_008595.1 1325386 1326900 D identified by match to protein family HMM PF00089; match to protein family HMM PF00595; trypsin 1325386..1326900 Mycobacterium avium 104 4527067 YP_880611.1 CDS MAV_1367 NC_008595.1 1326900 1327295 D mediates the export of protein precursors bearing twin-arginine signal peptides; sec-independent translocase 1326900..1327295 Mycobacterium avium 104 4527100 YP_880612.1 CDS MAV_1368 NC_008595.1 1327300 1328457 R identified by match to protein family HMM PF01883; Mrp protein complement(1327300..1328457) Mycobacterium avium 104 4526118 YP_880613.1 CDS MAV_1369 NC_008595.1 1328515 1329756 R hypothetical protein complement(1328515..1329756) Mycobacterium avium 104 4530433 YP_880614.1 CDS MAV_1370 NC_008595.1 1329959 1330501 R identified by match to protein family HMM PF06210; integral membrane protein complement(1329959..1330501) Mycobacterium avium 104 4526955 YP_880615.1 CDS MAV_1371 NC_008595.1 1330498 1331787 R identified by match to protein family HMM PF00571; match to protein family HMM PF03448; Mg/Co/Ni transporter MgtE complement(1330498..1331787) Mycobacterium avium 104 4529687 YP_880616.1 CDS MAV_1372 NC_008595.1 1331850 1332443 R hypothetical protein complement(1331850..1332443) Mycobacterium avium 104 4528020 YP_880617.1 CDS MAV_1373 NC_008595.1 1332669 1333124 D hypothetical protein 1332669..1333124 Mycobacterium avium 104 4525699 YP_880618.1 CDS MAV_1374 NC_008595.1 1333149 1334561 D identified by match to protein family HMM PF01547; extracellular solute-binding protein 1333149..1334561 Mycobacterium avium 104 4527475 YP_880619.1 CDS sugA NC_008595.1 1334615 1335493 D identified by match to protein family HMM PF00528; ABC transporter permease 1334615..1335493 Mycobacterium avium 104 4525760 YP_880620.1 CDS sugB NC_008595.1 1335528 1336322 D identified by match to protein family HMM PF00528; ABC transporter permease 1335528..1336322 Mycobacterium avium 104 4529880 YP_880621.1 CDS sugC NC_008595.1 1336327 1337505 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1336327..1337505 Mycobacterium avium 104 4527739 YP_880622.1 CDS MAV_1378 NC_008595.1 1337502 1338095 D hypothetical protein 1337502..1338095 Mycobacterium avium 104 4526083 YP_880623.1 CDS corA NC_008595.1 1338199 1339299 R identified by match to protein family HMM PF01544; match to protein family HMM TIGR00383; magnesium and cobalt transport protein CorA complement(1338199..1339299) Mycobacterium avium 104 4526269 YP_880624.1 CDS MAV_1380 NC_008595.1 1339489 1340478 D catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 1339489..1340478 Mycobacterium avium 104 4526786 YP_880625.1 CDS MAV_1381 NC_008595.1 1340531 1341733 D identified by match to protein family HMM PF00390; match to protein family HMM PF03949; NAD-dependent malic enzyme 1340531..1341733 Mycobacterium avium 104 4529759 YP_880626.1 CDS MAV_1383 NC_008595.1 1341730 1342599 D identified by match to protein family HMM PF04069; LpqZ protein 1341730..1342599 Mycobacterium avium 104 4529528 YP_880627.1 CDS MAV_1382 NC_008595.1 1342596 1343447 R identified by match to protein family HMM PF00106; short chain alcohol dehydrogenase complement(1342596..1343447) Mycobacterium avium 104 4525812 YP_880628.1 CDS MAV_1384 NC_008595.1 1343523 1344347 R identified by match to protein family HMM PF00106; short chain alcohol dehydrogenase complement(1343523..1344347) Mycobacterium avium 104 4525991 YP_880629.1 CDS MAV_1386 NC_008595.1 1348429 1349202 R hypothetical protein complement(1348429..1349202) Mycobacterium avium 104 4530260 YP_880630.1 CDS MAV_1387 NC_008595.1 1349579 1351459 D identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; drug transporter 1349579..1351459 Mycobacterium avium 104 4528697 YP_880631.1 CDS MAV_1388 NC_008595.1 1351464 1354877 R ATPase complement(1351464..1354877) Mycobacterium avium 104 4529220 YP_880632.1 CDS MAV_1389 NC_008595.1 1354929 1356113 R identified by match to protein family HMM PF00067; NikQ protein complement(1354929..1356113) Mycobacterium avium 104 4527140 YP_880633.1 CDS MAV_1390 NC_008595.1 1356146 1356700 R hypothetical protein complement(1356146..1356700) Mycobacterium avium 104 4526604 YP_880634.1 CDS MAV_1391 NC_008595.1 1356734 1357504 R identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase SDR complement(1356734..1357504) Mycobacterium avium 104 4529881 YP_880635.1 CDS pcaC NC_008595.1 1357553 1358164 R identified by match to protein family HMM PF02627; hypothetical protein complement(1357553..1358164) Mycobacterium avium 104 4528788 YP_880636.1 CDS MAV_1393 NC_008595.1 1358202 1359038 R identified by match to protein family HMM PF00106; carveol dehydrogenase complement(1358202..1359038) Mycobacterium avium 104 4528612 YP_880637.1 CDS MAV_1394 NC_008595.1 1359313 1359798 D hypothetical protein 1359313..1359798 Mycobacterium avium 104 4529147 YP_880638.1 CDS MAV_1395 NC_008595.1 1359912 1360646 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase 1359912..1360646 Mycobacterium avium 104 4530399 YP_880639.1 CDS MAV_1396 NC_008595.1 1360697 1360918 D hypothetical protein 1360697..1360918 Mycobacterium avium 104 4525544 YP_880640.1 CDS MAV_1397 NC_008595.1 1360915 1362279 D identified by match to protein family HMM PF00067; cytochrome P450 superfamily protein 1360915..1362279 Mycobacterium avium 104 4530030 YP_880641.1 CDS MAV_1399 NC_008595.1 1363433 1364476 D identified by match to protein family HMM PF03447; homoserine dehydrogenase 1363433..1364476 Mycobacterium avium 104 4528890 YP_880642.1 CDS MAV_1400 NC_008595.1 1364550 1365137 R LprE protein complement(1364550..1365137) Mycobacterium avium 104 4528605 YP_880643.1 CDS MAV_1401 NC_008595.1 1365258 1366958 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; ATP-dependent rna helicase, dead/deah box family protein 1365258..1366958 Mycobacterium avium 104 4526400 YP_880644.1 CDS MAV_1402 NC_008595.1 1366955 1368094 D identified by match to protein family HMM PF01757; acyltransferase, putative 1366955..1368094 Mycobacterium avium 104 4528855 YP_880645.1 CDS MAV_1403 NC_008595.1 1368283 1368876 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1368283..1368876) Mycobacterium avium 104 4525567 YP_880646.1 CDS MAV_1404 NC_008595.1 1368876 1370105 R identified by match to protein family HMM PF00067; cytochrome P450 130 complement(1368876..1370105) Mycobacterium avium 104 4530638 YP_880647.1 CDS MAV_1405 NC_008595.1 1370245 1371612 R identified by match to protein family HMM PF01565; match to protein family HMM PF02913; oxidoreductase, FAD-binding complement(1370245..1371612) Mycobacterium avium 104 4530629 YP_880648.1 CDS MAV_1406 NC_008595.1 1371633 1372850 R identified by match to protein family HMM PF07690; transporter, major facilitator family protein complement(1371633..1372850) Mycobacterium avium 104 4528076 YP_880649.1 CDS MAV_1407 NC_008595.1 1372952 1373779 D identified by match to protein family HMM PF03167; uracil-DNA glycosylase 1372952..1373779 Mycobacterium avium 104 4527060 YP_880650.1 CDS MAV_1408 NC_008595.1 1373786 1374913 D identified by match to protein family HMM PF01494; hypothetical protein 1373786..1374913 Mycobacterium avium 104 4529979 YP_880651.1 CDS MAV_1409 NC_008595.1 1374970 1376001 D identified by match to protein family HMM PF00296; alkanal monooxygenase alpha chain 1374970..1376001 Mycobacterium avium 104 4527974 YP_880652.1 CDS MAV_1410 NC_008595.1 1376015 1379929 R identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254; cyclic diguanylate phosphodiesterase domain-containing protein complement(1376015..1379929) Mycobacterium avium 104 4527202 YP_880653.1 CDS MAV_1412 NC_008595.1 1379954 1380073 D hypothetical protein 1379954..1380073 Mycobacterium avium 104 4526602 YP_880654.1 CDS MAV_1411 NC_008595.1 1380061 1380504 R identified by match to protein family HMM PF01230; HIT family protein complement(1380061..1380504) Mycobacterium avium 104 4526370 YP_880655.1 CDS MAV_1414 NC_008595.1 1380578 1381963 D catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 1380578..1381963 Mycobacterium avium 104 4530045 YP_880656.1 CDS MAV_1413 NC_008595.1 1381960 1382457 R T/U mismatch-specific DNA glycosylase complement(1381960..1382457) Mycobacterium avium 104 4526427 YP_880657.1 CDS MAV_1415 NC_008595.1 1382456 1383613 D identified by match to protein family HMM PF00211; chain A, Myco adenylyl cyclase, holoenzyme, inhibited state 1382456..1383613 Mycobacterium avium 104 4530727 YP_880658.1 CDS MAV_1416 NC_008595.1 1383903 1384478 D hypothetical protein 1383903..1384478 Mycobacterium avium 104 4526647 YP_880659.1 CDS MAV_1417 NC_008595.1 1384525 1386339 R identified by match to protein family HMM PF00069; serine/threonine protein kinase complement(1384525..1386339) Mycobacterium avium 104 4526729 YP_880660.1 CDS MAV_1418 NC_008595.1 1386437 1387582 R identified by match to protein family HMM PF00486; match to protein family HMM PF00498; match to protein family HMM PF03704; transcriptional regulator complement(1386437..1387582) Mycobacterium avium 104 4529989 YP_880661.1 CDS MAV_1419 NC_008595.1 1387692 1388024 R identified by match to protein family HMM PF05305; hypothetical protein complement(1387692..1388024) Mycobacterium avium 104 4527809 YP_880662.1 CDS MAV_1420 NC_008595.1 1388171 1390087 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter complement(1388171..1390087) Mycobacterium avium 104 4527073 YP_880663.1 CDS MAV_1421 NC_008595.1 1390084 1391841 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(1390084..1391841) Mycobacterium avium 104 4526456 YP_880664.1 CDS MAV_1422 NC_008595.1 1391902 1392036 R hypothetical protein complement(1391902..1392036) Mycobacterium avium 104 4530222 YP_880665.1 CDS MAV_1423 NC_008595.1 1392065 1392580 D LprB protein 1392065..1392580 Mycobacterium avium 104 4530806 YP_880666.1 CDS MAV_1424 NC_008595.1 1392577 1393146 D LprC protein 1392577..1393146 Mycobacterium avium 104 4528809 YP_880667.1 CDS MAV_1425 NC_008595.1 1393173 1393676 R identified by match to protein family HMM PF00300; phosphoglycerate mutase complement(1393173..1393676) Mycobacterium avium 104 4528472 YP_880668.1 CDS MAV_1426 NC_008595.1 1393708 1395126 R identified by match to protein family HMM PF02720; hypothetical protein complement(1393708..1395126) Mycobacterium avium 104 4530417 YP_880669.1 CDS MAV_1427 NC_008595.1 1395385 1396536 D identified by match to protein family HMM PF00149; DNA repair exonuclease 1395385..1396536 Mycobacterium avium 104 4529742 YP_880670.1 CDS MAV_1428 NC_008595.1 1396533 1399163 D hypothetical protein 1396533..1399163 Mycobacterium avium 104 4530012 YP_880671.1 CDS MAV_1430 NC_008595.1 1399227 1400471 D identified by match to protein family HMM PF00561; alpha/beta hydrolase 1399227..1400471 Mycobacterium avium 104 4525940 YP_880672.1 CDS MAV_1429 NC_008595.1 1400458 1402134 R identified by match to protein family HMM PF00496; extracellular solute-binding protein, family protein 5 complement(1400458..1402134) Mycobacterium avium 104 4526954 YP_880673.1 CDS oppD NC_008595.1 1402145 1403980 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein complement(1402145..1403980) Mycobacterium avium 104 4529861 YP_880674.1 CDS oppC NC_008595.1 1403977 1404903 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1403977..1404903) Mycobacterium avium 104 4525786 YP_880675.1 CDS oppB NC_008595.1 1404900 1405874 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1404900..1405874) Mycobacterium avium 104 4525709 YP_880676.1 CDS MAV_1434 NC_008595.1 1406023 1406514 D identified by match to protein family HMM PF00484; carbonic anhydrase 1406023..1406514 Mycobacterium avium 104 4530071 YP_880677.1 CDS MAV_1435 NC_008595.1 1406646 1407035 R identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; hypothetical protein complement(1406646..1407035) Mycobacterium avium 104 4529942 YP_880678.1 CDS cysD NC_008595.1 1407255 1408199 D with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 1407255..1408199 Mycobacterium avium 104 4527224 YP_880679.1 CDS cysNC NC_008595.1 1408199 1410049 D in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein 1408199..1410049 Mycobacterium avium 104 4529010 YP_880680.1 CDS MAV_1439 NC_008595.1 1410114 1410593 D identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; StaS protein 1410114..1410593 Mycobacterium avium 104 4529137 YP_880681.1 CDS MAV_1438 NC_008595.1 1410590 1410985 R glyoxalase/bleomycin resistance protein/dioxygenase complement(1410590..1410985) Mycobacterium avium 104 4528517 YP_880682.1 CDS MAV_1440 NC_008595.1 1411037 1411450 R identified by match to protein family HMM PF00903; glyoxalase/bleomycin resistance protein/dioxygenase complement(1411037..1411450) Mycobacterium avium 104 4528411 YP_880683.1 CDS MAV_1441 NC_008595.1 1411517 1412395 D identified by match to protein family HMM PF00296; hypothetical protein 1411517..1412395 Mycobacterium avium 104 4526148 YP_880684.1 CDS MAV_1442 NC_008595.1 1412457 1413329 D hypothetical protein 1412457..1413329 Mycobacterium avium 104 4529175 YP_880685.1 CDS MAV_1443 NC_008595.1 1413354 1415099 R identified by match to protein family HMM PF02254; match to protein family HMM PF07885; TrkA domain-containing protein complement(1413354..1415099) Mycobacterium avium 104 4528446 YP_880686.1 CDS MAV_1444 NC_008595.1 1415193 1415564 R identified by match to protein family HMM PF02136; steroid delta-isomerase complement(1415193..1415564) Mycobacterium avium 104 4527336 YP_880687.1 CDS MAV_1446 NC_008595.1 1415588 1416193 D identified by match to protein family HMM PF00293; nudix hydrolase 1415588..1416193 Mycobacterium avium 104 4526493 YP_880688.1 CDS MAV_1445 NC_008595.1 1416181 1416468 R hypothetical protein complement(1416181..1416468) Mycobacterium avium 104 4526355 YP_880689.1 CDS MAV_1447 NC_008595.1 1416666 1417367 R hypothetical protein complement(1416666..1417367) Mycobacterium avium 104 4526483 YP_880690.1 CDS MAV_1448 NC_008595.1 1417477 1417983 D identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 1417477..1417983 Mycobacterium avium 104 4529120 YP_880691.1 CDS MAV_1449 NC_008595.1 1418104 1418547 R hypothetical protein complement(1418104..1418547) Mycobacterium avium 104 4530752 YP_880692.1 CDS MAV_1450 NC_008595.1 1418532 1419593 R hypothetical protein complement(1418532..1419593) Mycobacterium avium 104 4529500 YP_880693.1 CDS MAV_1451 NC_008595.1 1419593 1419886 R identified by similarity to RF:NP_855753.1; hypothetical protein complement(1419593..1419886) Mycobacterium avium 104 4529001 YP_880694.1 CDS MAV_1452 NC_008595.1 1420070 1421179 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(1420070..1421179) Mycobacterium avium 104 4528996 YP_880695.1 CDS MAV_1453 NC_008595.1 1421254 1421676 R transposase complement(1421254..1421676) Mycobacterium avium 104 4530063 YP_880696.1 CDS MAV_1454 NC_008595.1 1421722 1422561 R identified by match to protein family HMM PF00665; transposase complement(1421722..1422561) Mycobacterium avium 104 4526437 YP_880697.1 CDS MAV_1455 NC_008595.1 1422639 1422983 R identified by match to protein family HMM PF01527; ISAfe7, transposase OrfA complement(1422639..1422983) Mycobacterium avium 104 4527915 YP_880698.1 CDS MAV_1456 NC_008595.1 1423006 1423197 R hypothetical protein complement(1423006..1423197) Mycobacterium avium 104 4530224 YP_880699.1 CDS MAV_1457 NC_008595.1 1423250 1424491 R hypothetical protein complement(1423250..1424491) Mycobacterium avium 104 4528018 YP_880700.1 CDS MAV_1458 NC_008595.1 1424505 1425779 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 1424505..1425779 Mycobacterium avium 104 4526024 YP_880701.1 CDS MAV_1459 NC_008595.1 1426421 1426618 D XRE family transcriptional regulator 1426421..1426618 Mycobacterium avium 104 4530672 YP_880702.1 CDS MAV_1460 NC_008595.1 1427273 1428580 R identified by match to protein family HMM PF00004; cell division cycle protein 48 complement(1427273..1428580) Mycobacterium avium 104 4528896 YP_880703.1 CDS MAV_1461 NC_008595.1 1428718 1428936 R hypothetical protein complement(1428718..1428936) Mycobacterium avium 104 4525795 YP_880704.1 CDS MAV_1462 NC_008595.1 1429129 1429311 R hypothetical protein complement(1429129..1429311) Mycobacterium avium 104 4528787 YP_880705.1 CDS MAV_1464 NC_008595.1 1429553 1430440 D identified by match to protein family HMM PF00155; aminotransferase, classes I and II family protein 1429553..1430440 Mycobacterium avium 104 4530633 YP_880706.1 CDS MAV_1463 NC_008595.1 1430394 1431698 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(1430394..1431698) Mycobacterium avium 104 4529741 YP_880707.1 CDS MAV_1465 NC_008595.1 1431775 1432194 D aminotransferase, classes I and II family protein 1431775..1432194 Mycobacterium avium 104 4529281 YP_880708.1 CDS MAV_1466 NC_008595.1 1432291 1432917 R hypothetical protein complement(1432291..1432917) Mycobacterium avium 104 4527085 YP_880709.1 CDS MAV_1467 NC_008595.1 1432924 1434597 R identified by match to protein family HMM PF06259; hypothetical protein complement(1432924..1434597) Mycobacterium avium 104 4529100 YP_880710.1 CDS MAV_1468 NC_008595.1 1434891 1436165 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(1434891..1436165) Mycobacterium avium 104 4527917 YP_880711.1 CDS MAV_1469 NC_008595.1 1436159 1436440 R hypothetical protein complement(1436159..1436440) Mycobacterium avium 104 4526449 YP_880712.1 CDS MAV_1471 NC_008595.1 1436539 1436796 D transposase 1436539..1436796 Mycobacterium avium 104 4528660 YP_880713.1 CDS MAV_1470 NC_008595.1 1436786 1438138 R ISChy9, transposase OrfB complement(1436786..1438138) Mycobacterium avium 104 4529173 YP_880714.1 CDS MAV_1472 NC_008595.1 1438215 1438565 D identified by match to protein family HMM PF01797; ISSoc3, OrfA transposase 1438215..1438565 Mycobacterium avium 104 4526913 YP_880715.1 CDS MAV_1473 NC_008595.1 1438578 1439495 R identified by match to protein family HMM PF00665; transposase complement(1438578..1439495) Mycobacterium avium 104 4530613 YP_880716.1 CDS MAV_1474 NC_008595.1 1439495 1439770 R transposase complement(1439495..1439770) Mycobacterium avium 104 4525788 YP_880717.1 CDS MAV_1476 NC_008595.1 1440784 1440978 R transposase complement(1440784..1440978) Mycobacterium avium 104 4529409 YP_880718.1 CDS MAV_1477 NC_008595.1 1440992 1441171 D hypothetical protein 1440992..1441171 Mycobacterium avium 104 4528507 YP_880719.1 CDS MAV_1478 NC_008595.1 1441979 1442449 R hypothetical protein complement(1441979..1442449) Mycobacterium avium 104 4527797 YP_880720.1 CDS MAV_1479 NC_008595.1 1442413 1443501 R hypothetical protein complement(1442413..1443501) Mycobacterium avium 104 4528202 YP_880721.1 CDS MAV_1480 NC_008595.1 1443501 1443794 R identified by similarity to RF:NP_855753.1; hypothetical protein complement(1443501..1443794) Mycobacterium avium 104 4530074 YP_880722.1 CDS MAV_1481 NC_008595.1 1444205 1445401 R identified by match to protein family HMM PF01609; TnpC protein complement(1444205..1445401) Mycobacterium avium 104 4526801 YP_880723.1 CDS MAV_1482 NC_008595.1 1445452 1446777 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 1445452..1446777 Mycobacterium avium 104 4529930 YP_880724.1 CDS MAV_1483 NC_008595.1 1446797 1446976 R hypothetical protein complement(1446797..1446976) Mycobacterium avium 104 4527286 YP_880725.1 CDS MAV_1484 NC_008595.1 1447189 1448295 D identified by match to protein family HMM PF00589; integrase 1447189..1448295 Mycobacterium avium 104 4529576 YP_880726.1 CDS MAV_1485 NC_008595.1 1448472 1448696 D hypothetical protein 1448472..1448696 Mycobacterium avium 104 4529770 YP_880727.1 CDS MAV_1486 NC_008595.1 1448829 1450232 D gp54 protein 1448829..1450232 Mycobacterium avium 104 4528879 YP_880728.1 CDS MAV_1487 NC_008595.1 1450253 1451377 D hypothetical protein 1450253..1451377 Mycobacterium avium 104 4529376 YP_880729.1 CDS MAV_1488 NC_008595.1 1451590 1451748 D hypothetical protein 1451590..1451748 Mycobacterium avium 104 4527867 YP_880730.1 CDS MAV_1489 NC_008595.1 1451753 1452253 D hypothetical protein 1451753..1452253 Mycobacterium avium 104 4529370 YP_880731.1 CDS MAV_1490 NC_008595.1 1452250 1452720 D flagellar hook-length control protein 1452250..1452720 Mycobacterium avium 104 4528055 YP_880732.1 CDS MAV_1491 NC_008595.1 1452717 1452869 D hypothetical protein 1452717..1452869 Mycobacterium avium 104 4526481 YP_880733.1 CDS MAV_1493 NC_008595.1 1452897 1453601 D identified by match to protein family HMM PF00239; Y4cG protein 1452897..1453601 Mycobacterium avium 104 4527547 YP_880734.1 CDS MAV_1492 NC_008595.1 1453598 1453954 R identified by match to protein family HMM PF01022; transcriptional regulator complement(1453598..1453954) Mycobacterium avium 104 4525950 YP_880735.1 CDS MAV_1494 NC_008595.1 1454007 1454531 D identified by match to protein family HMM PF00903; cadmium inducible protein cadi 1454007..1454531 Mycobacterium avium 104 4528907 YP_880736.1 CDS arsB NC_008595.1 1454536 1455642 D identified by match to protein family HMM PF01758; match to protein family HMM TIGR00832; arsenical-resistance protein 1454536..1455642 Mycobacterium avium 104 4530461 YP_880737.1 CDS MAV_1496 NC_008595.1 1455639 1456313 D identified by match to protein family HMM PF01451; low molecular weight phosphotyrosine protein phosphatase 1455639..1456313 Mycobacterium avium 104 4526382 YP_880738.1 CDS MAV_1497 NC_008595.1 1456328 1456723 D identified by match to protein family HMM PF01451; low molecular weight phosphotyrosine protein phosphatase 1456328..1456723 Mycobacterium avium 104 4527702 YP_880739.1 CDS MAV_1498 NC_008595.1 1456873 1458147 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(1456873..1458147) Mycobacterium avium 104 4526433 YP_880740.1 CDS MAV_1499 NC_008595.1 1458359 1458619 D hypothetical protein 1458359..1458619 Mycobacterium avium 104 4528368 YP_880741.1 CDS MAV_1500 NC_008595.1 1458616 1459335 D hypothetical protein 1458616..1459335 Mycobacterium avium 104 4528606 YP_880742.1 CDS MAV_1501 NC_008595.1 1459345 1460160 D gp13 protein 1459345..1460160 Mycobacterium avium 104 4526802 YP_880743.1 CDS MAV_1502 NC_008595.1 1460157 1460462 D hypothetical protein 1460157..1460462 Mycobacterium avium 104 4530468 YP_880744.1 CDS MAV_1503 NC_008595.1 1460500 1461189 D hypothetical protein 1460500..1461189 Mycobacterium avium 104 4528120 YP_880745.1 CDS MAV_1504 NC_008595.1 1461522 1463054 D gp2 protein 1461522..1463054 Mycobacterium avium 104 4526537 YP_880746.1 CDS MAV_1505 NC_008595.1 1463243 1463365 D hypothetical protein 1463243..1463365 Mycobacterium avium 104 4526030 YP_880747.1 CDS lysA NC_008595.1 1465260 1466678 D identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048; diaminopimelate decarboxylase 1465260..1466678 Mycobacterium avium 104 4528829 YP_880748.1 CDS MAV_1509 NC_008595.1 1466682 1468007 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1466682..1468007 Mycobacterium avium 104 4527876 YP_880749.1 CDS thrC NC_008595.1 1468004 1469086 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1468004..1469086 Mycobacterium avium 104 4529531 YP_880750.1 CDS thrB NC_008595.1 1469128 1470063 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 1469128..1470063 Mycobacterium avium 104 4526435 YP_880751.1 CDS MAV_1512 NC_008595.1 1470192 1470338 D hypothetical protein 1470192..1470338 Mycobacterium avium 104 4530279 YP_880752.1 CDS rho NC_008595.1 1470394 1472184 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 1470394..1472184 Mycobacterium avium 104 4528567 YP_880753.1 CDS MAV_1513 NC_008595.1 1472181 1472303 R hypothetical protein complement(1472181..1472303) Mycobacterium avium 104 4529765 YP_880754.1 CDS rpmE NC_008595.1 1472286 1472528 D RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 1472286..1472528 Mycobacterium avium 104 4526222 YP_880755.1 CDS prfA NC_008595.1 1472625 1473698 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 1472625..1473698 Mycobacterium avium 104 4527648 YP_880756.1 CDS MAV_1517 NC_008595.1 1473721 1474659 D identified by match to protein family HMM PF05175; match to protein family HMM TIGR00536; modification methylase, HemK family protein 1473721..1474659 Mycobacterium avium 104 4526564 YP_880757.1 CDS MAV_1518 NC_008595.1 1474659 1475318 D identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Sua5/YciO/YrdC/YwlC family protein 1474659..1475318 Mycobacterium avium 104 4528161 YP_880758.1 CDS MAV_1519 NC_008595.1 1475345 1476568 D identified by match to protein family HMM PF00953; glycosyl transferase, group 4 family protein 1475345..1476568 Mycobacterium avium 104 4527983 YP_880759.1 CDS MAV_1520 NC_008595.1 1476784 1477266 D hypothetical protein 1476784..1477266 Mycobacterium avium 104 4528017 YP_880760.1 CDS atpB NC_008595.1 1477259 1478017 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 1477259..1478017 Mycobacterium avium 104 4526925 YP_880761.1 CDS MAV_1522 NC_008595.1 1478096 1478350 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 1478096..1478350 Mycobacterium avium 104 4526366 YP_880762.1 CDS MAV_1523 NC_008595.1 1478357 1478893 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 1478357..1478893 Mycobacterium avium 104 4529373 YP_880763.1 CDS MAV_1524 NC_008595.1 1478901 1480241 D produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 1478901..1480241 Mycobacterium avium 104 4530650 YP_880764.1 CDS atpA NC_008595.1 1480309 1481973 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 1480309..1481973 Mycobacterium avium 104 4529239 YP_880765.1 CDS atpG NC_008595.1 1481980 1482894 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 1481980..1482894 Mycobacterium avium 104 4528722 YP_880766.1 CDS atpD NC_008595.1 1482923 1484380 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 1482923..1484380 Mycobacterium avium 104 4528852 YP_880767.1 CDS atpC NC_008595.1 1484420 1484785 D part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 1484420..1484785 Mycobacterium avium 104 4527249 YP_880768.1 CDS MAV_1530 NC_008595.1 1484815 1485246 D hypothetical protein 1484815..1485246 Mycobacterium avium 104 4526518 YP_880769.1 CDS MAV_1529 NC_008595.1 1485243 1485830 R identified by match to protein family HMM PF01923; match to protein family HMM TIGR00636; ATP:cob(I)alamin adenosyltransferase complement(1485243..1485830) Mycobacterium avium 104 4527990 YP_880770.1 CDS murA NC_008595.1 1485921 1487174 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1485921..1487174 Mycobacterium avium 104 4528163 YP_880771.1 CDS MAV_1535 NC_008595.1 1492858 1493355 D identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 1492858..1493355 Mycobacterium avium 104 4525639 YP_880772.1 CDS MAV_1536 NC_008595.1 1493402 1493899 R identified by match to protein family HMM PF01035; match to protein family HMM PF02870; match to protein family HMM TIGR00589; methylated-DNA--protein-cysteine methyltransferase complement(1493402..1493899) Mycobacterium avium 104 4527402 YP_880773.1 CDS MAV_1537 NC_008595.1 1493896 1495395 R identified by match to protein family HMM PF00165; match to protein family HMM PF00730; match to protein family HMM PF02805; match to protein family HMM PF06029; AraC family transcriptional regulator complement(1493896..1495395) Mycobacterium avium 104 4528064 YP_880774.1 CDS MAV_1538 NC_008595.1 1495481 1496365 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(1495481..1496365) Mycobacterium avium 104 4527049 YP_880775.1 CDS MAV_1539 NC_008595.1 1496450 1497694 D identified by match to protein family HMM PF07690; major facilitator family protein transporter 1496450..1497694 Mycobacterium avium 104 4529165 YP_880776.1 CDS MAV_1540 NC_008595.1 1498157 1499791 R identified by match to protein family HMM PF00211; match to protein family HMM PF00672; HAMP domain-containing protein complement(1498157..1499791) Mycobacterium avium 104 4528442 YP_880777.1 CDS MAV_1541 NC_008595.1 1499846 1500508 D identified by match to protein family HMM PF01939; hypothetical protein 1499846..1500508 Mycobacterium avium 104 4527126 YP_880778.1 CDS MAV_1542 NC_008595.1 1500598 1500828 D hypothetical protein 1500598..1500828 Mycobacterium avium 104 4527459 YP_880779.1 CDS mce NC_008595.1 1500839 1501303 R identified by match to protein family HMM PF00903; match to protein family HMM TIGR03081; methylmalonyl-CoA epimerase complement(1500839..1501303) Mycobacterium avium 104 4526549 YP_880780.1 CDS MAV_1544 NC_008595.1 1501385 1502566 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 1501385..1502566 Mycobacterium avium 104 4527212 YP_880781.1 CDS MAV_1545 NC_008595.1 1502757 1503668 D identified by match to protein family HMM PF00085; thioredoxin 1502757..1503668 Mycobacterium avium 104 4527647 YP_880782.1 CDS MAV_1547 NC_008595.1 1505923 1508007 R identified by match to protein family HMM PF00128; alpha-amylase complement(1505923..1508007) Mycobacterium avium 104 4527722 YP_880783.1 CDS MAV_1549 NC_008595.1 1508313 1510928 D identified by match to protein family HMM PF00343; match to protein family HMM TIGR02094; alpha-glucan phosphorylase 1508313..1510928 Mycobacterium avium 104 4530077 YP_880784.1 CDS MAV_1548 NC_008595.1 1510912 1512903 R identified by match to protein family HMM PF00270; DeaD/DeaH family protein helicase complement(1510912..1512903) Mycobacterium avium 104 4530261 YP_880785.1 CDS pncB NC_008595.1 1512958 1514292 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(1512958..1514292) Mycobacterium avium 104 4527197 YP_880786.1 CDS clpS NC_008595.1 1514360 1514677 D involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 1514360..1514677 Mycobacterium avium 104 4526600 YP_880787.1 CDS MAV_1552 NC_008595.1 1514702 1515289 D hypothetical protein 1514702..1515289 Mycobacterium avium 104 4529435 YP_880788.1 CDS MAV_1553 NC_008595.1 1515300 1516340 D identified by match to protein family HMM PF03576; peptidase T4 1515300..1516340 Mycobacterium avium 104 4526595 YP_880789.1 CDS MAV_1554 NC_008595.1 1516391 1517062 D identified by match to protein family HMM PF01694; rhomboid family protein 1516391..1517062 Mycobacterium avium 104 4530285 YP_880790.1 CDS murI NC_008595.1 1517059 1517886 D converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1517059..1517886 Mycobacterium avium 104 4527447 YP_880791.1 CDS MAV_1556 NC_008595.1 1517977 1518741 D identified by match to protein family HMM PF00753; metal-dependent hydrolase of the beta-lactamase III 1517977..1518741 Mycobacterium avium 104 4530759 YP_880792.1 CDS rph NC_008595.1 1518775 1519554 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 1518775..1519554 Mycobacterium avium 104 4526029 YP_880793.1 CDS rdgB NC_008595.1 1520032 1520646 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 1520032..1520646 Mycobacterium avium 104 4529201 YP_880794.1 CDS MAV_1559 NC_008595.1 1520661 1521011 R hypothetical protein complement(1520661..1521011) Mycobacterium avium 104 4525668 YP_880795.1 CDS MAV_1560 NC_008595.1 1521008 1521346 R hypothetical protein complement(1521008..1521346) Mycobacterium avium 104 4525830 YP_880796.1 CDS MAV_1562 NC_008595.1 1521879 1522430 D hypothetical protein 1521879..1522430 Mycobacterium avium 104 4527611 YP_880797.1 CDS MAV_1563 NC_008595.1 1522432 1522884 D LppJ protein 1522432..1522884 Mycobacterium avium 104 4528882 YP_880798.1 CDS MAV_1564 NC_008595.1 1522925 1523047 R hypothetical protein complement(1522925..1523047) Mycobacterium avium 104 4527706 YP_880799.1 CDS MAV_1565 NC_008595.1 1523092 1523424 D hypothetical protein 1523092..1523424 Mycobacterium avium 104 4528841 YP_880800.1 CDS MAV_1566 NC_008595.1 1523800 1526388 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF04954; match to protein family HMM PF08021; ABC transporter ATP-binding protein 1523800..1526388 Mycobacterium avium 104 4528592 YP_880801.1 CDS MAV_1567 NC_008595.1 1526385 1528121 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1526385..1528121 Mycobacterium avium 104 4526454 YP_880802.1 CDS MAV_1568 NC_008595.1 1528209 1529276 D identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein, putative 1528209..1529276 Mycobacterium avium 104 4527200 YP_880803.1 CDS MAV_1569 NC_008595.1 1529281 1529709 R identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase complement(1529281..1529709) Mycobacterium avium 104 4529909 YP_880804.1 CDS MAV_1570 NC_008595.1 1529758 1530579 R identified by match to protein family HMM PF00106; carveol dehydrogenase complement(1529758..1530579) Mycobacterium avium 104 4529962 YP_880805.1 CDS MAV_1571 NC_008595.1 1530579 1531772 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(1530579..1531772) Mycobacterium avium 104 4528565 YP_880806.1 CDS MAV_1572 NC_008595.1 1531949 1532689 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase 1531949..1532689 Mycobacterium avium 104 4529152 YP_880807.1 CDS MAV_1573 NC_008595.1 1532686 1533906 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1532686..1533906 Mycobacterium avium 104 4525566 YP_880808.1 CDS MAV_1574 NC_008595.1 1533908 1535107 D L-carnitine dehydratase/bile acid-inducible protein F 1533908..1535107 Mycobacterium avium 104 4525586 YP_880809.1 CDS MAV_1575 NC_008595.1 1535130 1536323 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 1535130..1536323 Mycobacterium avium 104 4530744 YP_880810.1 CDS MAV_1576 NC_008595.1 1536330 1537022 D identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 1536330..1537022 Mycobacterium avium 104 4529325 YP_880811.1 CDS MAV_1578 NC_008595.1 1537097 1537459 D hypothetical protein 1537097..1537459 Mycobacterium avium 104 4530708 YP_880812.1 CDS MAV_1577 NC_008595.1 1537435 1538991 R identified by match to protein family HMM PF00501; AMP-binding enzyme complement(1537435..1538991) Mycobacterium avium 104 4530443 YP_880813.1 CDS MAV_1579 NC_008595.1 1538984 1540558 R identified by match to protein family HMM PF00501; acyl-CoA dehydrogenase complement(1538984..1540558) Mycobacterium avium 104 4526781 YP_880814.1 CDS MAV_1580 NC_008595.1 1540548 1542005 R identified by match to protein family HMM PF00501; AMP-dependent synthetase and ligase complement(1540548..1542005) Mycobacterium avium 104 4530575 YP_880815.1 CDS MAV_1581 NC_008595.1 1542005 1542811 R identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase complement(1542005..1542811) Mycobacterium avium 104 4529359 YP_880816.1 CDS MAV_1582 NC_008595.1 1542802 1543614 R identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase complement(1542802..1543614) Mycobacterium avium 104 4529564 YP_880817.1 CDS MAV_1583 NC_008595.1 1543719 1544501 R identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase complement(1543719..1544501) Mycobacterium avium 104 4526338 YP_880818.1 CDS MAV_1584 NC_008595.1 1544718 1545413 D hypothetical protein 1544718..1545413 Mycobacterium avium 104 4528077 YP_880819.1 CDS MAV_1585 NC_008595.1 1545410 1546300 D identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 1545410..1546300 Mycobacterium avium 104 4530509 YP_880820.1 CDS MAV_1586 NC_008595.1 1546320 1547108 R identified by match to protein family HMM PF00440; match to protein family HMM PF02909; TetR family transcriptional regulator complement(1546320..1547108) Mycobacterium avium 104 4530582 YP_880821.1 CDS MAV_1587 NC_008595.1 1547304 1548101 D identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 1547304..1548101 Mycobacterium avium 104 4528318 YP_880822.1 CDS MAV_1588 NC_008595.1 1548146 1549162 D identified by match to protein family HMM PF00701; dihydrodipicolinate synthetase 1548146..1549162 Mycobacterium avium 104 4529182 YP_880823.1 CDS MAV_1589 NC_008595.1 1549216 1549458 R hypothetical protein complement(1549216..1549458) Mycobacterium avium 104 4527150 YP_880824.1 CDS MAV_1590 NC_008595.1 1549770 1550594 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1549770..1550594 Mycobacterium avium 104 4527364 YP_880825.1 CDS MAV_1591 NC_008595.1 1550614 1551816 D identified by match to protein family HMM PF04909; amidohydrolase 1550614..1551816 Mycobacterium avium 104 4525883 YP_880826.1 CDS MAV_1592 NC_008595.1 1551839 1553476 D activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence; acyl-CoA synthetase 1551839..1553476 Mycobacterium avium 104 4528674 YP_880827.1 CDS MAV_1593 NC_008595.1 1553473 1554303 D identified by match to protein family HMM PF04909; amidohydrolase 1553473..1554303 Mycobacterium avium 104 4526990 YP_880828.1 CDS MAV_1594 NC_008595.1 1554306 1555352 D identified by match to protein family HMM PF00441; match to protein family HMM PF02771; acyl-CoA dehydrogenase 1554306..1555352 Mycobacterium avium 104 4527261 YP_880829.1 CDS MAV_1595 NC_008595.1 1555353 1556546 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 1555353..1556546 Mycobacterium avium 104 4530732 YP_880830.1 CDS MAV_1596 NC_008595.1 1556663 1557808 R identified by match to protein family HMM PF02803; thiolase complement(1556663..1557808) Mycobacterium avium 104 4526305 YP_880831.1 CDS MAV_1597 NC_008595.1 1557863 1559077 R identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F complement(1557863..1559077) Mycobacterium avium 104 4526234 YP_880832.1 CDS MAV_1598 NC_008595.1 1559099 1560301 R identified by match to protein family HMM PF00067; cytochrome P450 superfamily protein complement(1559099..1560301) Mycobacterium avium 104 4525821 YP_880833.1 CDS MAV_1599 NC_008595.1 1560430 1561272 R identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase complement(1560430..1561272) Mycobacterium avium 104 4527919 YP_880834.1 CDS MAV_1600 NC_008595.1 1561314 1562966 R activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence; acyl-CoA synthetase complement(1561314..1562966) Mycobacterium avium 104 4529553 YP_880835.1 CDS MAV_1601 NC_008595.1 1562975 1563607 R identified by match to protein family HMM PF03061; thioesterase complement(1562975..1563607) Mycobacterium avium 104 4528502 YP_880836.1 CDS MAV_1602 NC_008595.1 1563604 1564233 R identified by match to protein family HMM PF00857; isochorismatase complement(1563604..1564233) Mycobacterium avium 104 4529399 YP_880837.1 CDS MAV_1603 NC_008595.1 1564230 1565243 R identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein complement(1564230..1565243) Mycobacterium avium 104 4529682 YP_880838.1 CDS MAV_1604 NC_008595.1 1565360 1566982 D steroid monooxygenase 1565360..1566982 Mycobacterium avium 104 4527562 YP_880839.1 CDS MAV_1605 NC_008595.1 1566997 1568118 D hypothetical protein 1566997..1568118 Mycobacterium avium 104 4525703 YP_880840.1 CDS MAV_1606 NC_008595.1 1568118 1568498 D hypothetical protein 1568118..1568498 Mycobacterium avium 104 4529141 YP_880841.1 CDS MAV_1607 NC_008595.1 1568507 1569535 D hypothetical protein 1568507..1569535 Mycobacterium avium 104 4529446 YP_880842.1 CDS MAV_1608 NC_008595.1 1569608 1571104 R identified by match to protein family HMM PF01039; carboxyl transferase domain-containing protein complement(1569608..1571104) Mycobacterium avium 104 4527213 YP_880843.1 CDS MAV_1609 NC_008595.1 1571271 1572506 D identified by match to protein family HMM PF00067; cytochrome P450 family protein 1571271..1572506 Mycobacterium avium 104 4525579 YP_880844.1 CDS MAV_1610 NC_008595.1 1572564 1573388 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; NAD dependent epimerase/dehydratase 1572564..1573388 Mycobacterium avium 104 4529202 YP_880845.1 CDS MAV_1611 NC_008595.1 1573464 1574081 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1573464..1574081 Mycobacterium avium 104 4529233 YP_880846.1 CDS MAV_1612 NC_008595.1 1574105 1574782 D hypothetical protein 1574105..1574782 Mycobacterium avium 104 4526701 YP_880847.1 CDS MAV_1613 NC_008595.1 1574786 1576690 D identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062; ABC transporter 1574786..1576690 Mycobacterium avium 104 4528503 YP_880848.1 CDS MAV_1614 NC_008595.1 1576698 1577855 R identified by match to protein family HMM PF00107; alcohol dehydrogenase B complement(1576698..1577855) Mycobacterium avium 104 4529482 YP_880849.1 CDS MAV_1615 NC_008595.1 1577852 1579084 R identified by match to protein family HMM PF00067; cytochrome P450 superfamily protein complement(1577852..1579084) Mycobacterium avium 104 4529419 YP_880850.1 CDS MAV_1617 NC_008595.1 1579378 1580337 D identified by match to protein family HMM PF07859; alpha/beta hydrolase 1579378..1580337 Mycobacterium avium 104 4527679 YP_880851.1 CDS MAV_1616 NC_008595.1 1580314 1580511 R hypothetical protein complement(1580314..1580511) Mycobacterium avium 104 4527968 YP_880852.1 CDS MAV_1618 NC_008595.1 1580551 1581699 D identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain-containing protein 1580551..1581699 Mycobacterium avium 104 4528935 YP_880853.1 CDS MAV_1620 NC_008595.1 1581696 1582937 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase middle domain-containing protein 1581696..1582937 Mycobacterium avium 104 4528815 YP_880854.1 CDS MAV_1619 NC_008595.1 1582934 1584901 R identified by match to protein family HMM PF01740; match to protein family HMM PF02518; match to protein family HMM PF07228; anti-anti-sigma factor complement(1582934..1584901) Mycobacterium avium 104 4529522 YP_880855.1 CDS MAV_1621 NC_008595.1 1585148 1585657 D hypothetical protein 1585148..1585657 Mycobacterium avium 104 4530695 YP_880856.1 CDS MAV_1622 NC_008595.1 1585671 1587161 D identified by match to protein family HMM PF00174; oxidoreductase molybdopterin binding subunit 1585671..1587161 Mycobacterium avium 104 4530203 YP_880857.1 CDS MAV_1624 NC_008595.1 1587163 1587465 D hypothetical protein 1587163..1587465 Mycobacterium avium 104 4528831 YP_880858.1 CDS MAV_1623 NC_008595.1 1587410 1587781 R hypothetical protein complement(1587410..1587781) Mycobacterium avium 104 4530529 YP_880859.1 CDS MAV_1625 NC_008595.1 1587843 1589051 R identified by match to protein family HMM PF04909; amidohydrolase complement(1587843..1589051) Mycobacterium avium 104 4527143 YP_880860.1 CDS MAV_1626 NC_008595.1 1589151 1590182 R identified by match to protein family HMM PF00440; match to protein family HMM PF03061; match to protein family HMM TIGR00369; hypothetical protein complement(1589151..1590182) Mycobacterium avium 104 4528654 YP_880861.1 CDS MAV_1627 NC_008595.1 1590275 1591771 R identified by match to protein family HMM PF00501; feruloyl-CoA synthetase complement(1590275..1591771) Mycobacterium avium 104 4529127 YP_880862.1 CDS MAV_1628 NC_008595.1 1591768 1592703 R identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(1591768..1592703) Mycobacterium avium 104 4529895 YP_880863.1 CDS MAV_1629 NC_008595.1 1592700 1593848 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase complement(1592700..1593848) Mycobacterium avium 104 4526185 YP_880864.1 CDS MAV_1630 NC_008595.1 1593854 1594951 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase complement(1593854..1594951) Mycobacterium avium 104 4527599 YP_880865.1 CDS MAV_1631 NC_008595.1 1594978 1596048 R identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(1594978..1596048) Mycobacterium avium 104 4525941 YP_880866.1 CDS MAV_1632 NC_008595.1 1596128 1596979 D hypothetical protein 1596128..1596979 Mycobacterium avium 104 4527165 YP_880867.1 CDS MAV_1633 NC_008595.1 1596983 1597699 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; NAD dependent epimerase/dehydratase complement(1596983..1597699) Mycobacterium avium 104 4525926 YP_880868.1 CDS MAV_1634 NC_008595.1 1597719 1598540 R identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator complement(1597719..1598540) Mycobacterium avium 104 4528617 YP_880869.1 CDS MAV_1635 NC_008595.1 1598636 1601056 D identified by match to protein family HMM PF02515; caib/baif family protein 1598636..1601056 Mycobacterium avium 104 4525992 YP_880870.1 CDS MAV_1636 NC_008595.1 1601076 1601267 D hypothetical protein 1601076..1601267 Mycobacterium avium 104 4527366 YP_880871.1 CDS MAV_1637 NC_008595.1 1601269 1602564 R identified by match to protein family HMM PF00067; cytochrome P450 superfamily protein complement(1601269..1602564) Mycobacterium avium 104 4529789 YP_880872.1 CDS MAV_1638 NC_008595.1 1602661 1603788 D identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein 1602661..1603788 Mycobacterium avium 104 4528712 YP_880873.1 CDS MAV_1639 NC_008595.1 1603788 1605353 D identified by match to protein family HMM PF00501; AMP-binding enzyme, putative 1603788..1605353 Mycobacterium avium 104 4525701 YP_880874.1 CDS MAV_1640 NC_008595.1 1605415 1605840 D hypothetical protein 1605415..1605840 Mycobacterium avium 104 4526825 YP_880875.1 CDS MAV_1641 NC_008595.1 1605854 1606384 D hypothetical protein 1605854..1606384 Mycobacterium avium 104 4529951 YP_880876.1 CDS MAV_1642 NC_008595.1 1606396 1606818 D identified by match to protein family HMM PF01575; MaoC like domain-containing protein 1606396..1606818 Mycobacterium avium 104 4528302 YP_880877.1 CDS MAV_1643 NC_008595.1 1606888 1608354 R identified by match to protein family HMM PF00171; aldehyde dehydrogenase complement(1606888..1608354) Mycobacterium avium 104 4526025 YP_880878.1 CDS MAV_1645 NC_008595.1 1608486 1609838 D hypothetical protein 1608486..1609838 Mycobacterium avium 104 4526657 YP_880879.1 CDS MAV_1644 NC_008595.1 1609827 1610972 R identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein complement(1609827..1610972) Mycobacterium avium 104 4529075 YP_880880.1 CDS MAV_1646 NC_008595.1 1611013 1611921 D identified by match to protein family HMM PF00376; MerR family transcriptional regulator 1611013..1611921 Mycobacterium avium 104 4527589 YP_880881.1 CDS MAV_1648 NC_008595.1 1611982 1612704 D identified by match to protein family HMM TIGR01409; secreted protein 1611982..1612704 Mycobacterium avium 104 4527051 YP_880882.1 CDS MAV_1647 NC_008595.1 1612701 1613006 R hypothetical protein complement(1612701..1613006) Mycobacterium avium 104 4526950 YP_880883.1 CDS MAV_1649 NC_008595.1 1613026 1613139 R hypothetical protein complement(1613026..1613139) Mycobacterium avium 104 4525511 YP_880884.1 CDS MAV_1650 NC_008595.1 1613268 1622546 D identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801; fatty acid synthase 1613268..1622546 Mycobacterium avium 104 4527657 YP_880885.1 CDS acpS NC_008595.1 1622590 1622967 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 1622590..1622967 Mycobacterium avium 104 4526306 YP_880886.1 CDS MAV_1652 NC_008595.1 1623045 1624385 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; hypothetical protein 1623045..1624385 Mycobacterium avium 104 4528721 YP_880887.1 CDS MAV_1653 NC_008595.1 1624386 1624859 R identified by match to protein family HMM PF00578; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen complement(1624386..1624859) Mycobacterium avium 104 4526497 YP_880888.1 CDS MAV_1655 NC_008595.1 1624964 1625191 D hypothetical protein 1624964..1625191 Mycobacterium avium 104 4526212 YP_880889.1 CDS MAV_1654 NC_008595.1 1625178 1626917 R hypothetical protein complement(1625178..1626917) Mycobacterium avium 104 4530694 YP_880890.1 CDS MAV_1656 NC_008595.1 1627056 1627322 R hypothetical protein complement(1627056..1627322) Mycobacterium avium 104 4526161 YP_880891.1 CDS MAV_1658 NC_008595.1 1627699 1628937 R hypothetical protein complement(1627699..1628937) Mycobacterium avium 104 4527028 YP_880892.1 CDS MAV_1659 NC_008595.1 1629127 1631481 D identified by match to protein family HMM PF03176; mmpl family protein 1629127..1631481 Mycobacterium avium 104 4528920 YP_880893.1 CDS MAV_1660 NC_008595.1 1631529 1632422 D hypothetical protein 1631529..1632422 Mycobacterium avium 104 4525720 YP_880894.1 CDS MAV_1661 NC_008595.1 1632641 1633780 D identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 1632641..1633780 Mycobacterium avium 104 4526094 YP_880895.1 CDS MAV_1662 NC_008595.1 1633788 1634213 R hypothetical protein complement(1633788..1634213) Mycobacterium avium 104 4530159 YP_880896.1 CDS MAV_1664 NC_008595.1 1634423 1635070 R 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease complement(1634423..1635070) Mycobacterium avium 104 4529617 YP_880897.1 CDS MAV_1665 NC_008595.1 1635196 1636761 D identified by match to protein family HMM PF05872; ATP-binding protein 1635196..1636761 Mycobacterium avium 104 4527307 YP_880898.1 CDS MAV_1666 NC_008595.1 1636765 1637571 R identified by match to protein family HMM PF00106; short chain dehydrogenase complement(1636765..1637571) Mycobacterium avium 104 4528000 YP_880899.1 CDS MAV_1667 NC_008595.1 1637686 1638981 D identified by match to protein family HMM PF07690; permease of the major facilitator superfamily protein 1637686..1638981 Mycobacterium avium 104 4529479 YP_880900.1 CDS MAV_1668 NC_008595.1 1639088 1639849 R hypothetical protein complement(1639088..1639849) Mycobacterium avium 104 4526718 YP_880901.1 CDS MAV_1669 NC_008595.1 1639913 1640506 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1639913..1640506) Mycobacterium avium 104 4527814 YP_880902.1 CDS MAV_1670 NC_008595.1 1640752 1642353 D identified by match to protein family HMM PF01039; carboxyl transferase 1640752..1642353 Mycobacterium avium 104 4527034 YP_880903.1 CDS MAV_1671 NC_008595.1 1642359 1644374 D identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02785; match to protein family HMM PF02786; acetyl-/propionyl-coenzyme A carboxylase alpha chain 1642359..1644374 Mycobacterium avium 104 4527510 YP_880904.1 CDS MAV_1672 NC_008595.1 1644371 1645537 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 1644371..1645537 Mycobacterium avium 104 4526578 YP_880905.1 CDS MAV_1673 NC_008595.1 1645534 1646034 D identified by match to protein family HMM PF01575; MoaC domain-containing protein 1645534..1646034 Mycobacterium avium 104 4529723 YP_880906.1 CDS MAV_1674 NC_008595.1 1646031 1646852 D identified by match to protein family HMM PF03328; CitE protein 1646031..1646852 Mycobacterium avium 104 4527844 YP_880907.1 CDS MAV_1675 NC_008595.1 1647037 1648128 D identified by match to protein family HMM PF00676; pyruvate dehydrogenase E1 component, alpha subunit 1647037..1648128 Mycobacterium avium 104 4526585 YP_880908.1 CDS MAV_1676 NC_008595.1 1648132 1649187 D identified by match to protein family HMM PF02779; match to protein family HMM PF02780; pyruvate dehydrogenase E1 component subunit beta 1648132..1649187 Mycobacterium avium 104 4525843 YP_880909.1 CDS MAV_1677 NC_008595.1 1649184 1650350 D identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; branched-chain alpha-keto acid dehydrogenase subunit E2 1649184..1650350 Mycobacterium avium 104 4526421 YP_880910.1 CDS MAV_1678 NC_008595.1 1650353 1651123 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(1650353..1651123) Mycobacterium avium 104 4529558 YP_880911.1 CDS MAV_1679 NC_008595.1 1651373 1651783 R hypothetical protein complement(1651373..1651783) Mycobacterium avium 104 4525865 YP_880912.1 CDS MAV_1680 NC_008595.1 1651994 1652911 R identified by match to protein family HMM PF00665; transposase complement(1651994..1652911) Mycobacterium avium 104 4529495 YP_880913.1 CDS MAV_1681 NC_008595.1 1652911 1653186 R transposase complement(1652911..1653186) Mycobacterium avium 104 4529425 YP_880914.1 CDS MAV_1682 NC_008595.1 1653447 1654106 R identified by match to protein family HMM PF01083; serine esterase cutinase complement(1653447..1654106) Mycobacterium avium 104 4529725 YP_880915.1 CDS MAV_1683 NC_008595.1 1654829 1655137 D hypothetical protein 1654829..1655137 Mycobacterium avium 104 4526742 YP_880916.1 CDS MAV_1685 NC_008595.1 1655721 1656968 D identified by match to protein family HMM PF07859; alpha/beta hydrolase 1655721..1656968 Mycobacterium avium 104 4529393 YP_880917.1 CDS MAV_1686 NC_008595.1 1657126 1658601 D identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; acyltransferase, ws/dgat/mgat subfamily protein 1657126..1658601 Mycobacterium avium 104 4528795 YP_880918.1 CDS MAV_1687 NC_008595.1 1658664 1660415 D identified by match to protein family HMM PF01553; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; acyltransferase 1658664..1660415 Mycobacterium avium 104 4526455 YP_880919.1 CDS MAV_1689 NC_008595.1 1661600 1661944 D identified by match to protein family HMM PF01527; ISAfe7, transposase OrfA 1661600..1661944 Mycobacterium avium 104 4530525 YP_880920.1 CDS MAV_1690 NC_008595.1 1662022 1662861 D identified by match to protein family HMM PF00665; transposase 1662022..1662861 Mycobacterium avium 104 4529084 YP_880921.1 CDS MAV_1692 NC_008595.1 1664145 1666214 D identified by match to protein family HMM PF05425; ABC transporter permease 1664145..1666214 Mycobacterium avium 104 4525702 YP_880922.1 CDS MAV_1693 NC_008595.1 1666214 1666351 D hypothetical protein 1666214..1666351 Mycobacterium avium 104 4527376 YP_880923.1 CDS ssb NC_008595.1 1666414 1666896 D identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; hypothetical protein 1666414..1666896 Mycobacterium avium 104 4530072 YP_880924.1 CDS MAV_1695 NC_008595.1 1666975 1668651 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 1666975..1668651 Mycobacterium avium 104 4529583 YP_880925.1 CDS MAV_1696 NC_008595.1 1668685 1673583 D identified by match to protein family HMM PF05088; NAD-glutamate dehydrogenase 1668685..1673583 Mycobacterium avium 104 4527489 YP_880926.1 CDS MAV_1697 NC_008595.1 1673580 1673993 D hypothetical protein 1673580..1673993 Mycobacterium avium 104 4525642 YP_880927.1 CDS MAV_1698 NC_008595.1 1673981 1674652 D hypothetical protein 1673981..1674652 Mycobacterium avium 104 4527801 YP_880928.1 CDS MAV_1699 NC_008595.1 1674723 1675733 R hypothetical protein complement(1674723..1675733) Mycobacterium avium 104 4527252 YP_880929.1 CDS MAV_1700 NC_008595.1 1675806 1677422 R identified by match to protein family HMM PF00128; alpha-amylase complement(1675806..1677422) Mycobacterium avium 104 4526869 YP_880930.1 CDS MAV_1701 NC_008595.1 1677419 1677808 R identified by match to protein family HMM PF01152; hypothetical protein complement(1677419..1677808) Mycobacterium avium 104 4530648 YP_880931.1 CDS MAV_1702 NC_008595.1 1677952 1678599 D identified by match to protein family HMM PF01844; HNH endonuclease 1677952..1678599 Mycobacterium avium 104 4526885 YP_880932.1 CDS MAV_1703 NC_008595.1 1678665 1678895 D hypothetical protein 1678665..1678895 Mycobacterium avium 104 4530583 YP_880933.1 CDS MAV_1705 NC_008595.1 1678882 1679349 D hypothetical protein 1678882..1679349 Mycobacterium avium 104 4528823 YP_880934.1 CDS pepN NC_008595.1 1679346 1681937 R identified by match to protein family HMM PF01433; match to protein family HMM TIGR02412; aminopeptidase N complement(1679346..1681937) Mycobacterium avium 104 4526399 YP_880935.1 CDS MAV_1706 NC_008595.1 1682045 1682668 D identified by match to protein family HMM PF01323; hypothetical protein 1682045..1682668 Mycobacterium avium 104 4526972 YP_880936.1 CDS MAV_1707 NC_008595.1 1682724 1683203 D catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 1682724..1683203 Mycobacterium avium 104 4529367 YP_880937.1 CDS MAV_1708 NC_008595.1 1683222 1684028 D identified by match to protein family HMM PF01149; match to protein family HMM PF06831; endonuclease VIII and DNA n-glycosylase with an AP lyase activity 1683222..1684028 Mycobacterium avium 104 4528991 YP_880938.1 CDS lipP NC_008595.1 1684482 1685672 R identified by similarity to PIR:JC2091; match to protein family HMM PF00144; carboxylesterase, putative complement(1684482..1685672) Mycobacterium avium 104 4528817 YP_880939.1 CDS tig NC_008595.1 1686069 1687463 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1686069..1687463 Mycobacterium avium 104 4525872 YP_880940.1 CDS clpP NC_008595.1 1687584 1688183 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1687584..1688183 Mycobacterium avium 104 4528616 YP_880941.1 CDS clpP NC_008595.1 1688180 1688815 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1688180..1688815 Mycobacterium avium 104 4525684 YP_880942.1 CDS mmuM NC_008595.1 1688837 1689712 R converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines; homocysteine methyltransferase complement(1688837..1689712) Mycobacterium avium 104 4528418 YP_880943.1 CDS clpX NC_008595.1 1690046 1691326 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1690046..1691326 Mycobacterium avium 104 4529103 YP_880944.1 CDS MAV_1717 NC_008595.1 1691598 1693568 D identified by match to protein family HMM PF01855; pyruvate synthase 1691598..1693568 Mycobacterium avium 104 4529918 YP_880945.1 CDS orB NC_008595.1 1693626 1694717 D catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1693626..1694717 Mycobacterium avium 104 4529172 YP_880946.1 CDS MAV_1719 NC_008595.1 1694719 1695312 D MobA; links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide; involved in molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein A 1694719..1695312 Mycobacterium avium 104 4528249 YP_880947.1 CDS MAV_1720 NC_008595.1 1695475 1695645 D hypothetical protein 1695475..1695645 Mycobacterium avium 104 4528577 YP_880948.1 CDS MAV_1721 NC_008595.1 1696025 1696405 R hypothetical protein complement(1696025..1696405) Mycobacterium avium 104 4528950 YP_880949.1 CDS MAV_1722 NC_008595.1 1696421 1696861 D identified by match to protein family HMM PF06737; secreted protein 1696421..1696861 Mycobacterium avium 104 4529452 YP_880950.1 CDS MAV_1723 NC_008595.1 1696931 1698190 D identified by match to protein family HMM PF03435; saccharopine dehydrogenase 1696931..1698190 Mycobacterium avium 104 4529096 YP_880951.1 CDS valS NC_008595.1 1698249 1700897 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 1698249..1700897 Mycobacterium avium 104 4529699 YP_880952.1 CDS MAV_1725 NC_008595.1 1700894 1702351 D identified by match to protein family HMM PF02875; match to protein family HMM TIGR01499; FolC protein 1700894..1702351 Mycobacterium avium 104 4529501 YP_880953.1 CDS MAV_1726 NC_008595.1 1702348 1702725 D hypothetical protein 1702348..1702725 Mycobacterium avium 104 4525953 YP_880954.1 CDS ndk NC_008595.1 1702766 1703176 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1702766..1703176 Mycobacterium avium 104 4528603 YP_880955.1 CDS MAV_1728 NC_008595.1 1703516 1706365 D identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757; Rne protein 1703516..1706365 Mycobacterium avium 104 4525902 YP_880956.1 CDS rplU NC_008595.1 1706576 1706887 D identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 1706576..1706887 Mycobacterium avium 104 4527520 YP_880957.1 CDS rpmA NC_008595.1 1706905 1707171 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1706905..1707171 Mycobacterium avium 104 4525750 YP_880958.1 CDS obgE NC_008595.1 1707262 1708740 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1707262..1708740 Mycobacterium avium 104 4530037 YP_880959.1 CDS proB NC_008595.1 1708737 1709840 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1708737..1709840 Mycobacterium avium 104 4530556 YP_880960.1 CDS MAV_1733 NC_008595.1 1709855 1710505 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1709855..1710505) Mycobacterium avium 104 4529547 YP_880961.1 CDS MAV_1734 NC_008595.1 1710610 1711887 D cytochrome P450 124 1710610..1711887 Mycobacterium avium 104 4530271 YP_880962.1 CDS MAV_1735 NC_008595.1 1711899 1712747 R identified by match to protein family HMM PF02146; NAD-dependent deacetylase 1 complement(1711899..1712747) Mycobacterium avium 104 4529612 YP_880963.1 CDS MAV_1736 NC_008595.1 1712765 1713292 R identified by match to protein family HMM PF00857; isochorismatase complement(1712765..1713292) Mycobacterium avium 104 4528944 YP_880964.1 CDS nadE NC_008595.1 1713367 1715409 D catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1713367..1715409 Mycobacterium avium 104 4528818 YP_880965.1 CDS MAV_1738 NC_008595.1 1715458 1715865 R hypothetical protein complement(1715458..1715865) Mycobacterium avium 104 4529448 YP_880966.1 CDS MAV_1739 NC_008595.1 1716005 1716574 R identified by match to protein family HMM PF00694; match to protein family HMM TIGR02087; 3-isopropylmalate dehydratase small subunit complement(1716005..1716574) Mycobacterium avium 104 4525767 YP_880967.1 CDS MAV_1740 NC_008595.1 1716571 1717812 R identified by match to protein family HMM PF00330; match to protein family HMM TIGR01343; 3-isopropylmalate dehydratase large subunit complement(1716571..1717812) Mycobacterium avium 104 4526873 YP_880968.1 CDS MAV_1742 NC_008595.1 1718707 1720137 R identified by match to protein family HMM PF03972; MmgE/PrpD family protein complement(1718707..1720137) Mycobacterium avium 104 4528686 YP_880969.1 CDS MAV_1744 NC_008595.1 1720229 1721032 D identified by match to protein family HMM PF00392; match to protein family HMM PF07702; GntR family transcriptional regulator 1720229..1721032 Mycobacterium avium 104 4529886 YP_880970.1 CDS MAV_1743 NC_008595.1 1721029 1721880 R identified by match to protein family HMM PF00294; kinase, pfkB family protein complement(1721029..1721880) Mycobacterium avium 104 4526608 YP_880971.1 CDS MAV_1745 NC_008595.1 1722065 1724260 D identified by match to protein family HMM PF00211; match to protein family HMM PF00672; adenylate and guanylate cyclase catalytic domain-containing protein 1722065..1724260 Mycobacterium avium 104 4529743 YP_880972.1 CDS proA NC_008595.1 1725729 1727036 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1725729..1727036 Mycobacterium avium 104 4526195 YP_880973.1 CDS MAV_1748 NC_008595.1 1727070 1727945 D identified by match to protein family HMM PF07728; ATPase 1727070..1727945 Mycobacterium avium 104 4527767 YP_880974.1 CDS MAV_1749 NC_008595.1 1727956 1729404 D identified by match to protein family HMM PF05762; hypothetical protein 1727956..1729404 Mycobacterium avium 104 4529095 YP_880975.1 CDS nadD NC_008595.1 1729565 1730206 D transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 1729565..1730206 Mycobacterium avium 104 4528946 YP_880976.1 CDS MAV_1751 NC_008595.1 1730203 1730598 D identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; hypothetical protein 1730203..1730598 Mycobacterium avium 104 4527994 YP_880977.1 CDS MAV_1752 NC_008595.1 1730595 1731269 D identified by match to protein family HMM PF00300; phosphoglycerate mutase 1730595..1731269 Mycobacterium avium 104 4529443 YP_880978.1 CDS MAV_1753 NC_008595.1 1731259 1732008 D hypothetical protein 1731259..1732008 Mycobacterium avium 104 4527338 YP_880979.1 CDS MAV_1754 NC_008595.1 1732017 1732850 D identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; DegV family protein 1732017..1732850 Mycobacterium avium 104 4528275 YP_880980.1 CDS MAV_1755 NC_008595.1 1732860 1735766 R identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; MmpL4 protein complement(1732860..1735766) Mycobacterium avium 104 4530760 YP_880981.1 CDS MAV_1756 NC_008595.1 1735763 1736155 R identified by match to protein family HMM PF05423; Mmps1 protein complement(1735763..1736155) Mycobacterium avium 104 4528213 YP_880982.1 CDS dapB NC_008595.1 1736332 1737417 R identified by match to protein family HMM PF01113; dihydrodipicolinate reductase N-terminus domain-containing protein complement(1736332..1737417) Mycobacterium avium 104 4530336 YP_880983.1 CDS MAV_1758 NC_008595.1 1737454 1738104 R hypothetical protein complement(1737454..1738104) Mycobacterium avium 104 4528024 YP_880984.1 CDS MAV_1759 NC_008595.1 1738145 1739857 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(1738145..1739857) Mycobacterium avium 104 4527190 YP_880985.1 CDS MAV_1760 NC_008595.1 1739930 1741060 R hypothetical protein complement(1739930..1741060) Mycobacterium avium 104 4528584 YP_880986.1 CDS MAV_1761 NC_008595.1 1741101 1744145 R identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; MmpL10 protein complement(1741101..1744145) Mycobacterium avium 104 4527870 YP_880987.1 CDS MAV_1762 NC_008595.1 1744228 1745649 R identified by match to protein family HMM PF00668; condensation domain-containing protein complement(1744228..1745649) Mycobacterium avium 104 4527554 YP_880988.1 CDS MAV_1763 NC_008595.1 1746555 1757594 D identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; tylactone synthase modules 4 & 5 1746555..1757594 Mycobacterium avium 104 4529719 YP_880989.1 CDS MAV_1764 NC_008595.1 1757608 1758030 R identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase complement(1757608..1758030) Mycobacterium avium 104 4526088 YP_880990.1 CDS MAV_1765 NC_008595.1 1758035 1759141 R identified by match to protein family HMM PF00441; pimeloyl-CoA dehydrogenase complement(1758035..1759141) Mycobacterium avium 104 4527961 YP_880991.1 CDS MAV_1766 NC_008595.1 1759149 1760309 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase domain-containing protein complement(1759149..1760309) Mycobacterium avium 104 4529524 YP_880992.1 CDS MAV_1767 NC_008595.1 1760489 1761349 D identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; competence protein ComEA 1760489..1761349 Mycobacterium avium 104 4528353 YP_880993.1 CDS MAV_1768 NC_008595.1 1761394 1762896 D identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360; competence protein 1761394..1762896 Mycobacterium avium 104 4530528 YP_880994.1 CDS MAV_1769 NC_008595.1 1762956 1763933 D identified by match to protein family HMM PF06144; hypothetical protein 1762956..1763933 Mycobacterium avium 104 4529033 YP_880995.1 CDS rpsT NC_008595.1 1763944 1764204 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(1763944..1764204) Mycobacterium avium 104 4529403 YP_880996.1 CDS MAV_1772 NC_008595.1 1766024 1767001 D identified by match to protein family HMM PF04168; hypothetical protein 1766024..1767001 Mycobacterium avium 104 4528868 YP_880997.1 CDS MAV_1773 NC_008595.1 1767001 1768053 D identified by match to protein family HMM PF01841; hypothetical protein 1767001..1768053 Mycobacterium avium 104 4530686 YP_880998.1 CDS MAV_1775 NC_008595.1 1768011 1768571 D hypothetical protein 1768011..1768571 Mycobacterium avium 104 4530275 YP_880999.1 CDS MAV_1774 NC_008595.1 1768550 1769392 R member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z complement(1768550..1769392) Mycobacterium avium 104 4528402 YP_881000.1 CDS MAV_1776 NC_008595.1 1769520 1769948 D identified by match to protein family HMM PF00571; CBS domain-containing protein 1769520..1769948 Mycobacterium avium 104 4526870 YP_881001.1 CDS MAV_1777 NC_008595.1 1769977 1770579 R hypothetical protein complement(1769977..1770579) Mycobacterium avium 104 4528942 YP_881002.1 CDS lepA NC_008595.1 1770604 1772538 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1770604..1772538 Mycobacterium avium 104 4527309 YP_881003.1 CDS MAV_1779 NC_008595.1 1772553 1773311 D LppR protein 1772553..1773311 Mycobacterium avium 104 4528222 YP_881004.1 CDS MAV_1780 NC_008595.1 1773324 1775363 R identified by match to protein family HMM PF00723; glycoside hydrolase complement(1773324..1775363) Mycobacterium avium 104 4527211 YP_881005.1 CDS MAV_1781 NC_008595.1 1775525 1775719 D hypothetical protein 1775525..1775719 Mycobacterium avium 104 4529216 YP_881006.1 CDS MAV_1782 NC_008595.1 1776070 1777101 D identified by match to protein family HMM PF01547; match to protein family HMM TIGR00971; sulfate ABC transporter sulfate-binding protein 1776070..1777101 Mycobacterium avium 104 4527707 YP_881007.1 CDS cysT NC_008595.1 1777098 1777970 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02139; sulfate ABC transporter permease 1777098..1777970 Mycobacterium avium 104 4528914 YP_881008.1 CDS cysW NC_008595.1 1777967 1778785 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140; sulfate ABC transporter permease 1777967..1778785 Mycobacterium avium 104 4530654 YP_881009.1 CDS MAV_1785 NC_008595.1 1778800 1779888 D identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM TIGR00968; sulfate/thiosulfate import ATP-binding protein CysA 1778800..1779888 Mycobacterium avium 104 4529174 YP_881010.1 CDS MAV_1786 NC_008595.1 1779935 1780678 R catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase complement(1779935..1780678) Mycobacterium avium 104 4526894 YP_881011.1 CDS MAV_1787 NC_008595.1 1780675 1782384 R identified by match to protein family HMM PF01077; match to protein family HMM PF03460; sulfite reductase [ferredoxin] 2 complement(1780675..1782384) Mycobacterium avium 104 4530589 YP_881012.1 CDS MAV_1788 NC_008595.1 1782409 1782612 D hypothetical protein 1782409..1782612 Mycobacterium avium 104 4525853 YP_881013.1 CDS MAV_1789 NC_008595.1 1782682 1783854 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1782682..1783854 Mycobacterium avium 104 4528030 YP_881014.1 CDS MAV_1790 NC_008595.1 1783861 1785102 R identified by match to protein family HMM PF05982; hypothetical protein complement(1783861..1785102) Mycobacterium avium 104 4528646 YP_881015.1 CDS MAV_1791 NC_008595.1 1785532 1786806 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(1785532..1786806) Mycobacterium avium 104 4525623 YP_881016.1 CDS MAV_1792 NC_008595.1 1787016 1788368 D catalyzes conversion of chorismate to salicylate, in mycobactin siderophore construction; requires Mg(2+) for function; salicylate synthase MbtI 1787016..1788368 Mycobacterium avium 104 4529812 YP_881017.1 CDS MAV_1793 NC_008595.1 1788529 1789545 D identified by match to protein family HMM PF03405; Fatty acid desaturase 1788529..1789545 Mycobacterium avium 104 4527191 YP_881018.1 CDS MAV_1794 NC_008595.1 1789878 1790744 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(1789878..1790744) Mycobacterium avium 104 4527875 YP_881019.1 CDS MAV_1795 NC_008595.1 1790819 1792315 R identified by match to protein family HMM PF01266; flavin-binding monooxygenase complement(1790819..1792315) Mycobacterium avium 104 4528078 YP_881020.1 CDS MAV_1796 NC_008595.1 1792318 1793238 R hypothetical protein complement(1792318..1793238) Mycobacterium avium 104 4530349 YP_881021.1 CDS MAV_1797 NC_008595.1 1793263 1794111 R identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase complement(1793263..1794111) Mycobacterium avium 104 4529944 YP_881022.1 CDS MAV_1798 NC_008595.1 1794113 1795030 R identified by match to protein family HMM PF07859; alpha/beta hydrolase complement(1794113..1795030) Mycobacterium avium 104 4526767 YP_881023.1 CDS MAV_1799 NC_008595.1 1795163 1795279 D hypothetical protein 1795163..1795279 Mycobacterium avium 104 4528263 YP_881024.1 CDS MAV_1800 NC_008595.1 1795281 1795697 R identified by match to protein family HMM PF01878; hypothetical protein complement(1795281..1795697) Mycobacterium avium 104 4527805 YP_881025.1 CDS MAV_1801 NC_008595.1 1795857 1796525 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1795857..1796525) Mycobacterium avium 104 4529203 YP_881026.1 CDS MAV_1802 NC_008595.1 1796636 1797781 D identified by match to protein family HMM PF00903; 2,3-dihydroxybiphenyl-1,2-dioxygenase 1796636..1797781 Mycobacterium avium 104 4525518 YP_881027.1 CDS MAV_1803 NC_008595.1 1797778 1798719 D identified by match to protein family HMM PF01557; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 1797778..1798719 Mycobacterium avium 104 4529758 YP_881028.1 CDS mhpA NC_008595.1 1798825 1800252 D catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate; 3-(3-hydroxyphenyl)propionate hydroxylase 1798825..1800252 Mycobacterium avium 104 4529461 YP_881029.1 CDS MAV_1805 NC_008595.1 1800291 1801565 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(1800291..1801565) Mycobacterium avium 104 4528570 YP_881030.1 CDS MAV_1806 NC_008595.1 1801703 1802380 D identified by match to protein family HMM PF01695; LprM protein 1801703..1802380 Mycobacterium avium 104 4527112 YP_881031.1 CDS MAV_1807 NC_008595.1 1802421 1803848 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 1802421..1803848 Mycobacterium avium 104 4528058 YP_881032.1 CDS MAV_1809 NC_008595.1 1805113 1805910 R identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase SDR complement(1805113..1805910) Mycobacterium avium 104 4528277 YP_881033.1 CDS MAV_1810 NC_008595.1 1805924 1806793 R identified by match to protein family HMM PF00106; carveol dehydrogenase complement(1805924..1806793) Mycobacterium avium 104 4527572 YP_881034.1 CDS MAV_1811 NC_008595.1 1806924 1807751 D identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 1806924..1807751 Mycobacterium avium 104 4530141 YP_881035.1 CDS MAV_1812 NC_008595.1 1807816 1808595 R identified by match to protein family HMM PF00106; 3-hydroxyacyl-CoA dehydrogenase type-2 complement(1807816..1808595) Mycobacterium avium 104 4528435 YP_881036.1 CDS MAV_1813 NC_008595.1 1808605 1809702 R identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(1808605..1809702) Mycobacterium avium 104 4528087 YP_881037.1 CDS MAV_1814 NC_008595.1 1809699 1810847 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; acyl-CoA dehydrogenase complement(1809699..1810847) Mycobacterium avium 104 4529225 YP_881038.1 CDS MAV_1815 NC_008595.1 1810860 1811729 R identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase SDR complement(1810860..1811729) Mycobacterium avium 104 4525554 YP_881039.1 CDS MAV_1816 NC_008595.1 1811834 1813057 D hypothetical protein 1811834..1813057 Mycobacterium avium 104 4529215 YP_881040.1 CDS MAV_1817 NC_008595.1 1813054 1814214 D identified by match to protein family HMM PF02803; thiolase 1813054..1814214 Mycobacterium avium 104 4526027 YP_881041.1 CDS MAV_1818 NC_008595.1 1814228 1815037 D identified by match to protein family HMM PF00378; enoyl-CoA hydratase 1814228..1815037 Mycobacterium avium 104 4526194 YP_881042.1 CDS MAV_1819 NC_008595.1 1815066 1815461 D identified by match to protein family HMM PF03061; esterase 1815066..1815461 Mycobacterium avium 104 4526795 YP_881043.1 CDS MAV_1820 NC_008595.1 1815465 1816301 R identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; hypothetical protein complement(1815465..1816301) Mycobacterium avium 104 4528865 YP_881044.1 CDS MAV_1821 NC_008595.1 1816298 1817038 R identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator complement(1816298..1817038) Mycobacterium avium 104 4528099 YP_881045.1 CDS MAV_1822 NC_008595.1 1817145 1818287 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; long-chain specific acyl-CoA dehydrogenase complement(1817145..1818287) Mycobacterium avium 104 4526290 YP_881046.1 CDS MAV_1823 NC_008595.1 1818297 1819295 R identified by match to protein family HMM PF00441; acyl-CoA dehydrogenase complement(1818297..1819295) Mycobacterium avium 104 4529074 YP_881047.1 CDS MAV_1824 NC_008595.1 1819292 1820248 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase complement(1819292..1820248) Mycobacterium avium 104 4527269 YP_881048.1 CDS MAV_1825 NC_008595.1 1820623 1822119 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase 1820623..1822119 Mycobacterium avium 104 4530659 YP_881049.1 CDS MAV_1826 NC_008595.1 1822149 1823360 D identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F 1822149..1823360 Mycobacterium avium 104 4525930 YP_881050.1 CDS MAV_1827 NC_008595.1 1823660 1824304 D hypothetical protein 1823660..1824304 Mycobacterium avium 104 4527778 YP_881051.1 CDS MAV_1828 NC_008595.1 1824522 1825166 D hypothetical protein 1824522..1825166 Mycobacterium avium 104 4526396 YP_881052.1 CDS MAV_1829 NC_008595.1 1825208 1826020 D identified by match to protein family HMM PF00106; retinol dehydrogenase 14 1825208..1826020 Mycobacterium avium 104 4527005 YP_881053.1 CDS dapB NC_008595.1 1826017 1827099 D identified by match to protein family HMM PF01113; dihydrodipicolinate reductase N-terminus domain-containing protein 1826017..1827099 Mycobacterium avium 104 4530404 YP_881054.1 CDS MAV_1831 NC_008595.1 1826931 1827539 D hypothetical protein 1826931..1827539 Mycobacterium avium 104 4530669 YP_881055.1 CDS MAV_1832 NC_008595.1 1827587 1828339 D identified by match to protein family HMM PF00106; 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase 1827587..1828339 Mycobacterium avium 104 4527206 YP_881056.1 CDS MAV_1833 NC_008595.1 1828400 1829311 R identified by match to protein family HMM PF00106; peroxisomal hydratase-dehydrogenase-epimerase (HDE) (multifunctionalbeta-oxidation protein) (MFP) complement(1828400..1829311) Mycobacterium avium 104 4529890 YP_881057.1 CDS MAV_1834 NC_008595.1 1829321 1830511 R acetyl-CoA hydrolase/transferase complement(1829321..1830511) Mycobacterium avium 104 4529025 YP_881058.1 CDS MAV_1835 NC_008595.1 1830508 1831653 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; acyl-CoA dehydrogenase protein complement(1830508..1831653) Mycobacterium avium 104 4527770 YP_881059.1 CDS MAV_1836 NC_008595.1 1831655 1831906 R hypothetical protein complement(1831655..1831906) Mycobacterium avium 104 4527771 YP_881060.1 CDS MAV_1837 NC_008595.1 1831903 1833054 R identified by match to protein family HMM PF04909; amidohydrolase complement(1831903..1833054) Mycobacterium avium 104 4527583 YP_881061.1 CDS MAV_1838 NC_008595.1 1833262 1834383 R identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase protein complement(1833262..1834383) Mycobacterium avium 104 4530126 YP_881062.1 CDS MAV_1839 NC_008595.1 1834380 1835873 R identified by match to protein family HMM PF00501; cyclohex-1-ene-1-carboxylate:CoA ligase complement(1834380..1835873) Mycobacterium avium 104 4528218 YP_881063.1 CDS MAV_1840 NC_008595.1 1835870 1836721 R identified by match to protein family HMM PF00561; alpha/beta hydrolase complement(1835870..1836721) Mycobacterium avium 104 4528905 YP_881064.1 CDS MAV_1841 NC_008595.1 1836725 1837945 R identified by match to protein family HMM PF00067; cytochrome P450 superfamily protein complement(1836725..1837945) Mycobacterium avium 104 4529052 YP_881065.1 CDS MAV_1842 NC_008595.1 1837969 1839123 R lipid-transfer protein complement(1837969..1839123) Mycobacterium avium 104 4526028 YP_881066.1 CDS MAV_1843 NC_008595.1 1839244 1840758 D identified by match to protein family HMM PF00501; AMP-dependent synthetase and ligase 1839244..1840758 Mycobacterium avium 104 4528799 YP_881067.1 CDS MAV_1844 NC_008595.1 1840770 1841069 D hypothetical protein 1840770..1841069 Mycobacterium avium 104 4530340 YP_881068.1 CDS MAV_1846 NC_008595.1 1841072 1841974 D identified by match to protein family HMM PF00561; alpha/beta hydrolase 1841072..1841974 Mycobacterium avium 104 4527047 YP_881069.1 CDS MAV_1847 NC_008595.1 1844550 1845938 D identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; acyltransferase, ws/dgat/mgat subfamily protein 1844550..1845938 Mycobacterium avium 104 4525923 YP_881070.1 CDS MAV_1849 NC_008595.1 1845991 1846974 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; dihydroflavonol-4-reductase 1845991..1846974 Mycobacterium avium 104 4525594 YP_881071.1 CDS MAV_1848 NC_008595.1 1846971 1847801 R identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase complement(1846971..1847801) Mycobacterium avium 104 4526153 YP_881072.1 CDS MAV_1850 NC_008595.1 1847828 1848472 R identified by match to protein family HMM PF05368; hypothetical protein complement(1847828..1848472) Mycobacterium avium 104 4526613 YP_881073.1 CDS MAV_1851 NC_008595.1 1848494 1849726 R identified by match to protein family HMM PF04909; amidohydrolase complement(1848494..1849726) Mycobacterium avium 104 4529792 YP_881074.1 CDS MAV_1852 NC_008595.1 1849850 1850479 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1849850..1850479 Mycobacterium avium 104 4530425 YP_881075.1 CDS MAV_1853 NC_008595.1 1850582 1850827 R MFS transporter complement(1850582..1850827) Mycobacterium avium 104 4526039 YP_881076.1 CDS MAV_1854 NC_008595.1 1850866 1851156 R transposase complement(1850866..1851156) Mycobacterium avium 104 4525681 YP_881077.1 CDS MAV_1855 NC_008595.1 1851272 1852546 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(1851272..1852546) Mycobacterium avium 104 4528276 YP_881078.1 CDS MAV_1856 NC_008595.1 1852540 1853325 R transposase complement(1852540..1853325) Mycobacterium avium 104 4530406 YP_881079.1 CDS MAV_1857 NC_008595.1 1853614 1854720 R identified by match to protein family HMM PF00355; oxygenase KshA complement(1853614..1854720) Mycobacterium avium 104 4526167 YP_881080.1 CDS MAV_1858 NC_008595.1 1854851 1855483 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1854851..1855483) Mycobacterium avium 104 4526573 YP_881081.1 CDS MAV_1859 NC_008595.1 1855609 1856607 D identified by match to protein family HMM PF00355; iron-sulfur cluster-binding protein, Rieske family protein 1855609..1856607 Mycobacterium avium 104 4526301 YP_881082.1 CDS MAV_1860 NC_008595.1 1856651 1857391 D hypothetical protein 1856651..1857391 Mycobacterium avium 104 4525885 YP_881083.1 CDS MAV_1862 NC_008595.1 1858426 1858851 R identified by match to protein family HMM PF01796; hypothetical protein complement(1858426..1858851) Mycobacterium avium 104 4530455 YP_881084.1 CDS MAV_1863 NC_008595.1 1858853 1860040 R identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; beta-ketoadipyl CoA thiolase complement(1858853..1860040) Mycobacterium avium 104 4526992 YP_881085.1 CDS MAV_1864 NC_008595.1 1860151 1860609 D identified by match to protein family HMM PF01575; MaoC domain-containing protein 1860151..1860609 Mycobacterium avium 104 4530132 YP_881086.1 CDS MAV_1865 NC_008595.1 1860609 1861820 D DitF protein 1860609..1861820 Mycobacterium avium 104 4530790 YP_881087.1 CDS MAV_1867 NC_008595.1 1861826 1863388 D identified by match to protein family HMM PF00501; AMP-dependent synthetase and ligase 1861826..1863388 Mycobacterium avium 104 4526034 YP_881088.1 CDS MAV_1866 NC_008595.1 1863385 1863852 R hypothetical protein complement(1863385..1863852) Mycobacterium avium 104 4526082 YP_881089.1 CDS MAV_1869 NC_008595.1 1863901 1864281 D identified by match to protein family HMM PF05305; hypothetical protein 1863901..1864281 Mycobacterium avium 104 4527099 YP_881090.1 CDS MAV_1870 NC_008595.1 1865539 1865853 R hypothetical protein complement(1865539..1865853) Mycobacterium avium 104 4528856 YP_881091.1 CDS MAV_1872 NC_008595.1 1865955 1866392 D amidohydrolase 1865955..1866392 Mycobacterium avium 104 4528145 YP_881092.1 CDS MAV_1871 NC_008595.1 1866347 1867264 R identified by match to protein family HMM PF00665; transposase complement(1866347..1867264) Mycobacterium avium 104 4529149 YP_881093.1 CDS MAV_1873 NC_008595.1 1867264 1867539 R transposase complement(1867264..1867539) Mycobacterium avium 104 4529168 YP_881094.1 CDS MAV_1874 NC_008595.1 1867689 1868483 D identified by match to protein family HMM PF04909; amidohydrolase 1867689..1868483 Mycobacterium avium 104 4527071 YP_881095.1 CDS MAV_1875 NC_008595.1 1868816 1869001 D LppE protein 1868816..1869001 Mycobacterium avium 104 4526846 YP_881096.1 CDS MAV_1876 NC_008595.1 1869018 1869212 D hypothetical protein 1869018..1869212 Mycobacterium avium 104 4528786 YP_881097.1 CDS MAV_1877 NC_008595.1 1869284 1871572 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 1869284..1871572 Mycobacterium avium 104 4528928 YP_881098.1 CDS MAV_1878 NC_008595.1 1871557 1872741 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; acyl-CoA dehydrogenase 1871557..1872741 Mycobacterium avium 104 4529668 YP_881099.1 CDS MAV_1879 NC_008595.1 1872753 1873742 R identified by match to protein family HMM PF00441; acyl-CoA dehydrogenase complement(1872753..1873742) Mycobacterium avium 104 4527272 YP_881100.1 CDS MAV_1880 NC_008595.1 1873831 1875345 D identified by match to protein family HMM PF00501; AMP-dependent synthetase and ligase 1873831..1875345 Mycobacterium avium 104 4526816 YP_881101.1 CDS MAV_1881 NC_008595.1 1875357 1876214 D identified by match to protein family HMM PF00106; carveol dehydrogenase 1875357..1876214 Mycobacterium avium 104 4526334 YP_881102.1 CDS MAV_1882 NC_008595.1 1876224 1877519 D hypothetical protein 1876224..1877519 Mycobacterium avium 104 4528593 YP_881103.1 CDS MAV_1883 NC_008595.1 1877527 1878669 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 1877527..1878669 Mycobacterium avium 104 4527031 YP_881104.1 CDS MAV_1884 NC_008595.1 1878666 1879424 D identified by match to protein family HMM PF00378; enoyl-CoA isomerase 1878666..1879424 Mycobacterium avium 104 4526362 YP_881105.1 CDS MAV_1885 NC_008595.1 1879467 1880180 R hypothetical protein complement(1879467..1880180) Mycobacterium avium 104 4530335 YP_881106.1 CDS MAV_1886 NC_008595.1 1880433 1880561 D hypothetical protein 1880433..1880561 Mycobacterium avium 104 4527545 YP_881107.1 CDS MAV_1887 NC_008595.1 1880650 1880994 D identified by match to protein family HMM PF01527; ISAfe7, transposase OrfA 1880650..1880994 Mycobacterium avium 104 4530499 YP_881108.1 CDS MAV_1889 NC_008595.1 1881072 1881911 D identified by match to protein family HMM PF00665; transposase 1881072..1881911 Mycobacterium avium 104 4529530 YP_881109.1 CDS MAV_1888 NC_008595.1 1881648 1882850 R identified by match to protein family HMM PF00296; hypothetical protein complement(1881648..1882850) Mycobacterium avium 104 4530235 YP_881110.1 CDS MAV_1890 NC_008595.1 1882903 1883499 R identified by match to protein family HMM PF01613; flavin reductase-like domain-containing protein complement(1882903..1883499) Mycobacterium avium 104 4530608 YP_881111.1 CDS MAV_1891 NC_008595.1 1883755 1884543 D identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase SDR 1883755..1884543 Mycobacterium avium 104 4525785 YP_881112.1 CDS MAV_1892 NC_008595.1 1884544 1885740 R identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F complement(1884544..1885740) Mycobacterium avium 104 4527941 YP_881113.1 CDS MAV_1893 NC_008595.1 1886042 1886950 D identified by match to protein family HMM PF02515; Mcr protein 1886042..1886950 Mycobacterium avium 104 4528114 YP_881114.1 CDS MAV_1894 NC_008595.1 1887129 1887719 D hypothetical protein 1887129..1887719 Mycobacterium avium 104 4529809 YP_881115.1 CDS MAV_1895 NC_008595.1 1887728 1888957 R identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F complement(1887728..1888957) Mycobacterium avium 104 4527970 YP_881116.1 CDS MAV_1896 NC_008595.1 1889054 1890226 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(1889054..1890226) Mycobacterium avium 104 4525616 YP_881117.1 CDS MAV_1897 NC_008595.1 1890252 1891757 R identified by match to protein family HMM PF00171; betaine-aldehyde dehydrogenase complement(1890252..1891757) Mycobacterium avium 104 4530585 YP_881118.1 CDS MAV_1898 NC_008595.1 1891767 1892549 R identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase complement(1891767..1892549) Mycobacterium avium 104 4527508 YP_881119.1 CDS MAV_1899 NC_008595.1 1892546 1894078 R identified by match to protein family HMM PF00501; feruloyl-CoA synthetase complement(1892546..1894078) Mycobacterium avium 104 4530388 YP_881120.1 CDS MAV_1900 NC_008595.1 1894094 1894618 R identified by match to protein family HMM PF00866; small subunit of dioxygenase in aniline dioxygenase complement(1894094..1894618) Mycobacterium avium 104 4526960 YP_881121.1 CDS MAV_1901 NC_008595.1 1894615 1895910 R identified by match to protein family HMM PF00355; match to protein family HMM PF00848; dioxygenase large subunit complement(1894615..1895910) Mycobacterium avium 104 4529468 YP_881122.1 CDS MAV_1902 NC_008595.1 1895907 1896353 R hypothetical protein complement(1895907..1896353) Mycobacterium avium 104 4528319 YP_881123.1 CDS MAV_1903 NC_008595.1 1896362 1897516 R thiolase complement(1896362..1897516) Mycobacterium avium 104 4527103 YP_881124.1 CDS MAV_1904 NC_008595.1 1897513 1897758 R hypothetical protein complement(1897513..1897758) Mycobacterium avium 104 4530692 YP_881125.1 CDS MAV_1905 NC_008595.1 1897955 1898884 D identified by match to protein family HMM PF00561; 2-hydroxy-6-ketonona-2,4-dienedoic acid hydrolase 1897955..1898884 Mycobacterium avium 104 4527013 YP_881126.1 CDS hpaH NC_008595.1 1898889 1899731 D identified by match to protein family HMM PF01689; match to protein family HMM TIGR02312; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1898889..1899731 Mycobacterium avium 104 4530592 YP_881127.1 CDS MAV_1907 NC_008595.1 1899779 1900498 D identified by match to protein family HMM PF03328; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 1899779..1900498 Mycobacterium avium 104 4529542 YP_881128.1 CDS MAV_1908 NC_008595.1 1900495 1901613 D identified by match to protein family HMM PF00296; FMN-dependent monooxygenase 1900495..1901613 Mycobacterium avium 104 4527322 YP_881129.1 CDS MAV_1909 NC_008595.1 1901730 1902902 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase domain-containing protein 1901730..1902902 Mycobacterium avium 104 4526472 YP_881130.1 CDS MAV_1910 NC_008595.1 1902922 1903944 D identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase 1902922..1903944 Mycobacterium avium 104 4527676 YP_881131.1 CDS MAV_1911 NC_008595.1 1903941 1905101 D thiolase 1903941..1905101 Mycobacterium avium 104 4527575 YP_881132.1 CDS MAV_1912 NC_008595.1 1905102 1906601 D identified by match to protein family HMM PF00501; acyl-CoA synthase 1905102..1906601 Mycobacterium avium 104 4530379 YP_881133.1 CDS MAV_1913 NC_008595.1 1906634 1907428 D identified by match to protein family HMM PF00106; carveol dehydrogenase 1906634..1907428 Mycobacterium avium 104 4528628 YP_881134.1 CDS MAV_1914 NC_008595.1 1907438 1908073 R identified by match to protein family HMM PF03061; thioesterase complement(1907438..1908073) Mycobacterium avium 104 4527933 YP_881135.1 CDS MAV_1915 NC_008595.1 1908201 1910657 D identified by match to protein family HMM PF02515; caib/baif family protein 1908201..1910657 Mycobacterium avium 104 4529372 YP_881136.1 CDS MAV_1916 NC_008595.1 1910662 1911273 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1910662..1911273) Mycobacterium avium 104 4527123 YP_881137.1 CDS MAV_1917 NC_008595.1 1911491 1912621 D identified by match to protein family HMM PF04909; amidohydrolase 1911491..1912621 Mycobacterium avium 104 4530143 YP_881138.1 CDS MAV_1918 NC_008595.1 1912626 1913825 D thiolase 1912626..1913825 Mycobacterium avium 104 4528664 YP_881139.1 CDS MAV_1919 NC_008595.1 1913822 1914271 D identified by match to protein family HMM PF01796; acyl dehydratase 1913822..1914271 Mycobacterium avium 104 4527456 YP_881140.1 CDS MAV_1920 NC_008595.1 1914278 1914487 D hypothetical protein 1914278..1914487 Mycobacterium avium 104 4528069 YP_881141.1 CDS MAV_1921 NC_008595.1 1914507 1915322 D identified by match to protein family HMM PF00106; carveol dehydrogenase 1914507..1915322 Mycobacterium avium 104 4526640 YP_881142.1 CDS MAV_1922 NC_008595.1 1915572 1916807 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase 1915572..1916807 Mycobacterium avium 104 4525638 YP_881143.1 CDS MAV_1923 NC_008595.1 1916987 1917277 D hypothetical protein 1916987..1917277 Mycobacterium avium 104 4526444 YP_881144.1 CDS MAV_1924 NC_008595.1 1917320 1917577 D hypothetical protein 1917320..1917577 Mycobacterium avium 104 4528383 YP_881145.1 CDS MAV_1926 NC_008595.1 1917570 1917965 D hypothetical protein 1917570..1917965 Mycobacterium avium 104 4526436 YP_881146.1 CDS MAV_1925 NC_008595.1 1917942 1919246 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(1917942..1919246) Mycobacterium avium 104 4529228 YP_881147.1 CDS MAV_1927 NC_008595.1 1919399 1920034 D hypothetical protein 1919399..1920034 Mycobacterium avium 104 4525845 YP_881148.1 CDS MAV_1928 NC_008595.1 1920043 1920873 D identified by match to protein family HMM PF03446; match to protein family HMM PF03807; 6-phosphogluconate dehydrogenase 1920043..1920873 Mycobacterium avium 104 4528477 YP_881149.1 CDS MAV_1929 NC_008595.1 1920884 1921969 R identified by match to protein family HMM PF01636; phosphotransferase complement(1920884..1921969) Mycobacterium avium 104 4526907 YP_881150.1 CDS MAV_1930 NC_008595.1 1922014 1923075 D identified by match to protein family HMM PF00296; hypothetical protein 1922014..1923075 Mycobacterium avium 104 4529843 YP_881151.1 CDS MAV_1931 NC_008595.1 1923128 1923763 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1923128..1923763) Mycobacterium avium 104 4526097 YP_881152.1 CDS MAV_1932 NC_008595.1 1923894 1925309 D identified by match to protein family HMM PF04909; amidohydrolase 1923894..1925309 Mycobacterium avium 104 4526615 YP_881153.1 CDS MAV_1934 NC_008595.1 1926155 1926667 D identified by match to protein family HMM PF00510; cytochrome C oxidase, subunit III family protein 1926155..1926667 Mycobacterium avium 104 4527981 YP_881154.1 CDS MAV_1935 NC_008595.1 1926724 1926945 D hypothetical protein 1926724..1926945 Mycobacterium avium 104 4530395 YP_881155.1 CDS MAV_1936 NC_008595.1 1926949 1927530 R hypothetical protein complement(1926949..1927530) Mycobacterium avium 104 4526064 YP_881156.1 CDS MAV_1937 NC_008595.1 1927534 1928457 R identified by match to protein family HMM PF00106; short chain dehydrogenase complement(1927534..1928457) Mycobacterium avium 104 4525759 YP_881157.1 CDS MAV_1938 NC_008595.1 1928454 1928675 R hypothetical protein complement(1928454..1928675) Mycobacterium avium 104 4529205 YP_881158.1 CDS MAV_1939 NC_008595.1 1928885 1929670 R identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase complement(1928885..1929670) Mycobacterium avium 104 4527385 YP_881159.1 CDS MAV_1940 NC_008595.1 1929682 1930956 R identified by match to protein family HMM PF00067; NikQ protein complement(1929682..1930956) Mycobacterium avium 104 4529740 YP_881160.1 CDS MAV_1941 NC_008595.1 1931111 1932193 D identified by match to protein family HMM PF01408; match to protein family HMM PF02894; oxidoreductase, NAD-binding Rossmann fold protein 1931111..1932193 Mycobacterium avium 104 4530463 YP_881161.1 CDS MAV_1942 NC_008595.1 1932190 1932696 D hypothetical protein 1932190..1932696 Mycobacterium avium 104 4525738 YP_881162.1 CDS MAV_1943 NC_008595.1 1932859 1933992 R identified by match to protein family HMM PF00107; alcohol dehydrogenase B complement(1932859..1933992) Mycobacterium avium 104 4528106 YP_881163.1 CDS MAV_1944 NC_008595.1 1934010 1935464 R identified by match to protein family HMM PF00171; betaine-aldehyde dehydrogenase complement(1934010..1935464) Mycobacterium avium 104 4525538 YP_881164.1 CDS MAV_1945 NC_008595.1 1935552 1935989 D hypothetical protein 1935552..1935989 Mycobacterium avium 104 4527001 YP_881165.1 CDS MAV_1946 NC_008595.1 1936058 1936441 D identified by match to protein family HMM PF01575; MaoC family protein 1936058..1936441 Mycobacterium avium 104 4526215 YP_881166.1 CDS MAV_1948 NC_008595.1 1936454 1937794 D identified by match to protein family HMM PF00440; transcriptional regulator 1936454..1937794 Mycobacterium avium 104 4529738 YP_881167.1 CDS mhpB NC_008595.1 1937763 1938656 R catalyzes the cleavage of 3-(2,3-dihydroxyphenyl) propionate into 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate; part of the 3-phenylpropionic acid degradation pathway; member of the protocatechuate 4,5-dioxygenase family; 3-(2,3-dihydroxyphenyl)propionate dioxygenase complement(1937763..1938656) Mycobacterium avium 104 4529476 YP_881168.1 CDS MAV_1949 NC_008595.1 1938664 1938858 R hypothetical protein complement(1938664..1938858) Mycobacterium avium 104 4528348 YP_881169.1 CDS MAV_1950 NC_008595.1 1938855 1940048 R identified by match to protein family HMM PF00067; cytochrome P450 126 complement(1938855..1940048) Mycobacterium avium 104 4527513 YP_881170.1 CDS MAV_1951 NC_008595.1 1940434 1941366 D postpolyketide modification protein 1940434..1941366 Mycobacterium avium 104 4527581 YP_881171.1 CDS MAV_1952 NC_008595.1 1941376 1941906 R identified by match to protein family HMM PF00440; transcriptional regulator complement(1941376..1941906) Mycobacterium avium 104 4525551 YP_881172.1 CDS MAV_1953 NC_008595.1 1942146 1943306 D identified by match to protein family HMM PF00067; cytochrome P450 1942146..1943306 Mycobacterium avium 104 4530756 YP_881173.1 CDS MAV_1954 NC_008595.1 1943322 1944242 R identified by match to protein family HMM PF00296; hypothetical protein complement(1943322..1944242) Mycobacterium avium 104 4527993 YP_881174.1 CDS MAV_1955 NC_008595.1 1944417 1946024 D identified by match to protein family HMM PF00391; PEP-utilizing protein 1944417..1946024 Mycobacterium avium 104 4529365 YP_881175.1 CDS MAV_1956 NC_008595.1 1946031 1947041 D hypothetical protein 1946031..1947041 Mycobacterium avium 104 4530305 YP_881176.1 CDS MAV_1957 NC_008595.1 1947073 1948683 D identified by match to protein family HMM PF00501; AMP-dependent synthetase and ligase 1947073..1948683 Mycobacterium avium 104 4529240 YP_881177.1 CDS MAV_1958 NC_008595.1 1948670 1949494 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase 1948670..1949494 Mycobacterium avium 104 4527521 YP_881178.1 CDS MAV_1959 NC_008595.1 1949501 1950106 R hypothetical protein complement(1949501..1950106) Mycobacterium avium 104 4527104 YP_881179.1 CDS MAV_1960 NC_008595.1 1950103 1951722 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase complement(1950103..1951722) Mycobacterium avium 104 4528874 YP_881180.1 CDS MAV_1961 NC_008595.1 1951887 1952249 D hypothetical protein 1951887..1952249 Mycobacterium avium 104 4530620 YP_881181.1 CDS MAV_1962 NC_008595.1 1952251 1952859 D identified by match to protein family HMM PF00881; NADPH nitroreductase 1952251..1952859 Mycobacterium avium 104 4529279 YP_881182.1 CDS MAV_1963 NC_008595.1 1952891 1955041 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 1952891..1955041 Mycobacterium avium 104 4527816 YP_881183.1 CDS MAV_1964 NC_008595.1 1955124 1956191 D lipid-transfer protein 1955124..1956191 Mycobacterium avium 104 4526605 YP_881184.1 CDS MAV_1966 NC_008595.1 1956188 1956607 D identified by match to protein family HMM PF01796; hypothetical protein 1956188..1956607 Mycobacterium avium 104 4526910 YP_881185.1 CDS MAV_1965 NC_008595.1 1956604 1957632 R hypothetical protein complement(1956604..1957632) Mycobacterium avium 104 4525890 YP_881186.1 CDS MAV_1967 NC_008595.1 1957801 1958157 R identified by match to protein family HMM PF01796; hypothetical protein complement(1957801..1958157) Mycobacterium avium 104 4528410 YP_881187.1 CDS MAV_1968 NC_008595.1 1958253 1959074 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; retinol dehydrogenase 12 complement(1958253..1959074) Mycobacterium avium 104 4528332 YP_881188.1 CDS MAV_1969 NC_008595.1 1959470 1959916 D hypothetical protein 1959470..1959916 Mycobacterium avium 104 4529627 YP_881189.1 CDS MAV_1970 NC_008595.1 1959913 1960620 D hypothetical protein 1959913..1960620 Mycobacterium avium 104 4529188 YP_881190.1 CDS MAV_1971 NC_008595.1 1960844 1961917 D hypothetical protein 1960844..1961917 Mycobacterium avium 104 4528608 YP_881191.1 CDS MAV_1972 NC_008595.1 1962064 1963470 R identified by match to protein family HMM PF01609; transposase complement(1962064..1963470) Mycobacterium avium 104 4527954 YP_881192.1 CDS MAV_1973 NC_008595.1 1963649 1964140 R hypothetical protein complement(1963649..1964140) Mycobacterium avium 104 4529417 YP_881193.1 CDS MAV_1974 NC_008595.1 1964419 1965693 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(1964419..1965693) Mycobacterium avium 104 4527314 YP_881194.1 CDS MAV_1975 NC_008595.1 1965746 1965892 R hypothetical protein complement(1965746..1965892) Mycobacterium avium 104 4528585 YP_881195.1 CDS MAV_1976 NC_008595.1 1965891 1966742 D identified by match to protein family HMM PF00106; short chain dehydrogenase 1965891..1966742 Mycobacterium avium 104 4529568 YP_881196.1 CDS MAV_1977 NC_008595.1 1966739 1967332 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1966739..1967332 Mycobacterium avium 104 4525757 YP_881197.1 CDS MAV_1978 NC_008595.1 1967487 1967651 R hypothetical protein complement(1967487..1967651) Mycobacterium avium 104 4528333 YP_881198.1 CDS MAV_1979 NC_008595.1 1967946 1968632 R identified by match to protein family HMM PF01965; ThiJ/PfpI family protein complement(1967946..1968632) Mycobacterium avium 104 4530277 YP_881199.1 CDS MAV_1980 NC_008595.1 1968781 1968900 R hypothetical protein complement(1968781..1968900) Mycobacterium avium 104 4525954 YP_881200.1 CDS MAV_1981 NC_008595.1 1969117 1969299 D topology modulation protein 1969117..1969299 Mycobacterium avium 104 4529011 YP_881201.1 CDS MAV_1982 NC_008595.1 1969352 1969465 D hypothetical protein 1969352..1969465 Mycobacterium avium 104 4526388 YP_881202.1 CDS MAV_1983 NC_008595.1 1969486 1969578 R hypothetical protein complement(1969486..1969578) Mycobacterium avium 104 4528109 YP_881203.1 CDS MAV_1984 NC_008595.1 1969593 1970060 R identified by match to protein family HMM PF01272; transcription elongation factor GreA complement(1969593..1970060) Mycobacterium avium 104 4528532 YP_881204.1 CDS MAV_1985 NC_008595.1 1970057 1970590 R transcription elongation factor GreA complement(1970057..1970590) Mycobacterium avium 104 4525744 YP_881205.1 CDS MAV_1986 NC_008595.1 1970944 1971576 R transmembrane protein complement(1970944..1971576) Mycobacterium avium 104 4526958 YP_881206.1 CDS MAV_1987 NC_008595.1 1971729 1973249 R DNA-binding protein complement(1971729..1973249) Mycobacterium avium 104 4529111 YP_881207.1 CDS MAV_1988 NC_008595.1 1973459 1973584 D 18 kDa antigen 2 1973459..1973584 Mycobacterium avium 104 4528470 YP_881208.1 CDS MAV_1989 NC_008595.1 1973633 1974907 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 1973633..1974907 Mycobacterium avium 104 4526132 YP_881209.1 CDS MAV_1990 NC_008595.1 1974987 1975316 D identified by match to protein family HMM PF00011; 18 kDa antigen 2 1974987..1975316 Mycobacterium avium 104 4529190 YP_881210.1 CDS MAV_1991 NC_008595.1 1975371 1975706 D hypothetical protein 1975371..1975706 Mycobacterium avium 104 4528126 YP_881211.1 CDS MAV_1992 NC_008595.1 1975906 1976097 D hypothetical protein 1975906..1976097 Mycobacterium avium 104 4530363 YP_881212.1 CDS MAV_1993 NC_008595.1 1976294 1976668 D identified by match to protein family HMM PF00376; HspR protein 1976294..1976668 Mycobacterium avium 104 4525969 YP_881213.1 CDS MAV_1994 NC_008595.1 1976688 1976798 D hypothetical protein 1976688..1976798 Mycobacterium avium 104 4528519 YP_881214.1 CDS MAV_1995 NC_008595.1 1976948 1978027 D identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 1976948..1978027 Mycobacterium avium 104 4525606 YP_881215.1 CDS MAV_1996 NC_008595.1 1978417 1978575 D hypothetical protein 1978417..1978575 Mycobacterium avium 104 4530782 YP_881216.1 CDS MAV_1997 NC_008595.1 1978609 1978971 R hypothetical protein complement(1978609..1978971) Mycobacterium avium 104 4529931 YP_881217.1 CDS MAV_1998 NC_008595.1 1978968 1980299 R identified by match to protein family HMM PF00823; PPE family protein complement(1978968..1980299) Mycobacterium avium 104 4529917 YP_881218.1 CDS MAV_1999 NC_008595.1 1980548 1980850 R hypothetical protein complement(1980548..1980850) Mycobacterium avium 104 4528609 YP_881219.1 CDS MAV_2000 NC_008595.1 1981053 1982309 R hypothetical protein complement(1981053..1982309) Mycobacterium avium 104 4530697 YP_881220.1 CDS MAV_2001 NC_008595.1 1982309 1982467 R hypothetical protein complement(1982309..1982467) Mycobacterium avium 104 4527254 YP_881221.1 CDS MAV_2002 NC_008595.1 1982515 1983552 R identified by match to protein family HMM PF00665; transposase complement(1982515..1983552) Mycobacterium avium 104 4527201 YP_881222.1 CDS MAV_2003 NC_008595.1 1983571 1984749 R hypothetical protein complement(1983571..1984749) Mycobacterium avium 104 4525502 YP_881223.1 CDS MAV_2004 NC_008595.1 1984749 1986395 R identified by match to protein family HMM PF01061; ABC transporter complement(1984749..1986395) Mycobacterium avium 104 4529159 YP_881224.1 CDS MAV_2005 NC_008595.1 1986429 1987820 R identified by match to protein family HMM PF00668; PapA2 protein complement(1986429..1987820) Mycobacterium avium 104 4527250 YP_881225.1 CDS MAV_2006 NC_008595.1 1988873 1990213 D identified by match to protein family HMM PF00823; PPE family protein 1988873..1990213 Mycobacterium avium 104 4526850 YP_881226.1 CDS MAV_2007 NC_008595.1 1990630 1991691 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1990630..1991691 Mycobacterium avium 104 4530226 YP_881227.1 CDS MAV_2008 NC_008595.1 1991786 1993441 R identified by match to protein family HMM PF00501; 2,3-dihydroxybenzoate-AMP ligase complement(1991786..1993441) Mycobacterium avium 104 4526937 YP_881228.1 CDS MAV_2009 NC_008595.1 1993551 1997045 D identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733; MbtB protein 1993551..1997045 Mycobacterium avium 104 4530240 YP_881229.1 CDS MAV_2010 NC_008595.1 1997156 1997818 D identified by match to protein family HMM PF00975; phenyloxazoline synthase mbtb 1997156..1997818 Mycobacterium avium 104 4530591 YP_881230.1 CDS MAV_2011 NC_008595.1 1997815 1999143 D identified by match to protein family HMM PF00109; match to protein family HMM PF02801; erythronolide synthase, modules 1 and 2 1997815..1999143 Mycobacterium avium 104 4528434 YP_881231.1 CDS MAV_2012 NC_008595.1 1999140 2002181 D identified by match to protein family HMM PF00106; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; MbtD protein 1999140..2002181 Mycobacterium avium 104 4529316 YP_881232.1 CDS MAV_2013 NC_008595.1 2002183 2008755 D identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733; linear gramicidin synthetase subunit D 2002183..2008755 Mycobacterium avium 104 4525558 YP_881233.1 CDS MAV_2014 NC_008595.1 2008752 2013194 D identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733; sulfotransferase 2008752..2013194 Mycobacterium avium 104 4528171 YP_881234.1 CDS MAV_2015 NC_008595.1 2013191 2014477 D MbtG protein 2013191..2014477 Mycobacterium avium 104 4526077 YP_881235.1 CDS MAV_2016 NC_008595.1 2014458 2014673 D identified by match to protein family HMM PF03621; hypothetical protein 2014458..2014673 Mycobacterium avium 104 4528272 YP_881236.1 CDS MAV_2017 NC_008595.1 2014849 2015385 D low molecular weight antigen MTB12 2014849..2015385 Mycobacterium avium 104 4529857 YP_881237.1 CDS MAV_2019 NC_008595.1 2015679 2016197 D low molecular weight antigen MTB12 2015679..2016197 Mycobacterium avium 104 4526912 YP_881238.1 CDS MAV_2018 NC_008595.1 2016191 2017081 R identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase ECF-subfamily protein sigma factor complement(2016191..2017081) Mycobacterium avium 104 4526653 YP_881239.1 CDS pcaC NC_008595.1 2017078 2017674 R identified by match to protein family HMM PF02627; hypothetical protein complement(2017078..2017674) Mycobacterium avium 104 4530459 YP_881240.1 CDS MAV_2021 NC_008595.1 2017756 2018070 R hypothetical protein complement(2017756..2018070) Mycobacterium avium 104 4530502 YP_881241.1 CDS hrcA NC_008595.1 2018286 2019317 D Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 2018286..2019317 Mycobacterium avium 104 4530717 YP_881242.1 CDS dnaJ NC_008595.1 2019374 2020519 D chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 2019374..2020519 Mycobacterium avium 104 4526924 YP_881243.1 CDS MAV_2024 NC_008595.1 2020543 2021304 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 2020543..2021304 Mycobacterium avium 104 4530257 YP_881244.1 CDS MAV_2025 NC_008595.1 2021465 2022523 D identified by match to protein family HMM PF00013; match to protein family HMM PF02562; PhoH family protein 2021465..2022523 Mycobacterium avium 104 4528811 YP_881245.1 CDS MAV_2026 NC_008595.1 2022546 2023079 D identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043; metalloprotease 2022546..2023079 Mycobacterium avium 104 4530228 YP_881246.1 CDS MAV_2027 NC_008595.1 2023079 2024356 D hypothetical protein 2023079..2024356 Mycobacterium avium 104 4530025 YP_881247.1 CDS MAV_2028 NC_008595.1 2024353 2025663 D identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; CBS domain-containing protein 2024353..2025663 Mycobacterium avium 104 4529333 YP_881248.1 CDS era NC_008595.1 2025656 2026555 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 2025656..2026555 Mycobacterium avium 104 4526152 YP_881249.1 CDS MAV_2030 NC_008595.1 2026560 2026697 D hypothetical protein 2026560..2026697 Mycobacterium avium 104 4529191 YP_881250.1 CDS MAV_2031 NC_008595.1 2026702 2028159 R identified by match to protein family HMM PF01276; match to protein family HMM PF03711; Orn/Lys/Arg decarboxylase complement(2026702..2028159) Mycobacterium avium 104 4526240 YP_881251.1 CDS MAV_2032 NC_008595.1 2028234 2029613 R catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase complement(2028234..2029613) Mycobacterium avium 104 4529340 YP_881252.1 CDS recO NC_008595.1 2029834 2030604 D involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 2029834..2030604 Mycobacterium avium 104 4526935 YP_881253.1 CDS uppS NC_008595.1 2030597 2031487 D catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 2030597..2031487 Mycobacterium avium 104 4526018 YP_881254.1 CDS MAV_2035 NC_008595.1 2031487 2031915 D hypothetical protein 2031487..2031915 Mycobacterium avium 104 4526711 YP_881255.1 CDS MAV_2036 NC_008595.1 2031994 2032401 R identified by match to protein family HMM PF01475; FurB protein complement(2031994..2032401) Mycobacterium avium 104 4526079 YP_881256.1 CDS MAV_2037 NC_008595.1 2032398 2032829 R identified by match to protein family HMM PF01022; ArsR family transcriptional regulator complement(2032398..2032829) Mycobacterium avium 104 4530384 YP_881257.1 CDS glyS NC_008595.1 2033033 2034412 D Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 2033033..2034412 Mycobacterium avium 104 4527934 YP_881258.1 CDS MAV_2040 NC_008595.1 2036403 2036624 D hypothetical protein 2036403..2036624 Mycobacterium avium 104 4527630 YP_881259.1 CDS MAV_2041 NC_008595.1 2036671 2038656 R identified by match to protein family HMM PF04536; hypothetical protein complement(2036671..2038656) Mycobacterium avium 104 4529595 YP_881260.1 CDS MAV_2042 NC_008595.1 2038800 2040071 D dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 2038800..2040071 Mycobacterium avium 104 4530397 YP_881261.1 CDS MAV_2043 NC_008595.1 2040139 2040756 D identified by match to protein family HMM PF00080; [Cu-Zn] superoxide dismutase 2040139..2040756 Mycobacterium avium 104 4527518 YP_881262.1 CDS dnaG NC_008595.1 2040798 2042750 D synthesizes RNA primers at the replication forks; DNA primase 2040798..2042750 Mycobacterium avium 104 4530157 YP_881263.1 CDS MAV_2044 NC_008595.1 2042734 2043009 R hypothetical protein complement(2042734..2043009) Mycobacterium avium 104 4529464 YP_881264.1 CDS MAV_2047 NC_008595.1 2043276 2043911 D identified by match to protein family HMM PF02426; muconolactone delta-isomerase 2043276..2043911 Mycobacterium avium 104 4526985 YP_881265.1 CDS MAV_2048 NC_008595.1 2043916 2045307 R fmnh2-utilizing oxygenase complement(2043916..2045307) Mycobacterium avium 104 4529067 YP_881266.1 CDS MAV_2049 NC_008595.1 2045304 2046425 R identified by match to protein family HMM PF00296; hypothetical protein complement(2045304..2046425) Mycobacterium avium 104 4527808 YP_881267.1 CDS MAV_2050 NC_008595.1 2046422 2047543 R fmnh2-utilizing oxygenase complement(2046422..2047543) Mycobacterium avium 104 4528221 YP_881268.1 CDS cysE NC_008595.1 2047798 2048487 R identified by match to protein family HMM PF00132; match to protein family HMM TIGR01172; serine O-acetyltransferase complement(2047798..2048487) Mycobacterium avium 104 4530133 YP_881269.1 CDS cysK NC_008595.1 2048489 2049421 R identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; cysteine synthase A complement(2048489..2049421) Mycobacterium avium 104 4527863 YP_881270.1 CDS MAV_2053 NC_008595.1 2049422 2050714 R hypothetical protein complement(2049422..2050714) Mycobacterium avium 104 4525508 YP_881271.1 CDS MAV_2054 NC_008595.1 2051186 2052109 D major membrane protein 1 2051186..2052109 Mycobacterium avium 104 4529236 YP_881272.1 CDS MAV_2055 NC_008595.1 2052096 2054108 D identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM TIGR01979; cysteine desulphurases, SufS 2052096..2054108 Mycobacterium avium 104 4527179 YP_881273.1 CDS MAV_2056 NC_008595.1 2054132 2055265 R identified by match to protein family HMM PF03601; hypothetical protein complement(2054132..2055265) Mycobacterium avium 104 4529195 YP_881274.1 CDS MAV_2057 NC_008595.1 2055262 2055420 R hypothetical protein complement(2055262..2055420) Mycobacterium avium 104 4528229 YP_881275.1 CDS MAV_2058 NC_008595.1 2055538 2056314 R sulfotransferase complement(2055538..2056314) Mycobacterium avium 104 4525947 YP_881276.1 CDS MAV_2059 NC_008595.1 2056737 2057504 D identified by match to protein family HMM PF02405; TrnB1 protein 2056737..2057504 Mycobacterium avium 104 4530033 YP_881277.1 CDS MAV_2060 NC_008595.1 2057501 2058349 D identified by match to protein family HMM PF02405; TrnB2 protein 2057501..2058349 Mycobacterium avium 104 4526661 YP_881278.1 CDS MAV_2061 NC_008595.1 2058353 2059621 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 2058353..2059621 Mycobacterium avium 104 4530145 YP_881279.1 CDS MAV_2062 NC_008595.1 2059618 2060646 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 2059618..2060646 Mycobacterium avium 104 4527621 YP_881280.1 CDS MAV_2063 NC_008595.1 2060688 2061821 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 2060688..2061821 Mycobacterium avium 104 4528048 YP_881281.1 CDS MAV_2064 NC_008595.1 2061818 2063152 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 2061818..2063152 Mycobacterium avium 104 4526530 YP_881282.1 CDS MAV_2065 NC_008595.1 2063221 2063946 D identified by match to protein family HMM PF02470; LprM protein 2063221..2063946 Mycobacterium avium 104 4525549 YP_881283.1 CDS MAV_2066 NC_008595.1 2063943 2064074 D ISAfe7, transposase OrfA 2063943..2064074 Mycobacterium avium 104 4530244 YP_881284.1 CDS MAV_2068 NC_008595.1 2065031 2065621 D LprM protein 2065031..2065621 Mycobacterium avium 104 4529116 YP_881285.1 CDS MAV_2069 NC_008595.1 2065630 2067090 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 2065630..2067090 Mycobacterium avium 104 4530758 YP_881286.1 CDS MAV_2070 NC_008595.1 2067105 2067716 D hypothetical protein 2067105..2067716 Mycobacterium avium 104 4528644 YP_881287.1 CDS MAV_2071 NC_008595.1 2067713 2068288 D hypothetical protein 2067713..2068288 Mycobacterium avium 104 4528913 YP_881288.1 CDS MAV_2072 NC_008595.1 2068292 2068792 D hypothetical protein 2068292..2068792 Mycobacterium avium 104 4528525 YP_881289.1 CDS MAV_2073 NC_008595.1 2068811 2069011 R hypothetical protein complement(2068811..2069011) Mycobacterium avium 104 4530008 YP_881290.1 CDS MAV_2074 NC_008595.1 2069091 2070368 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(2069091..2070368) Mycobacterium avium 104 4525598 YP_881291.1 CDS MAV_2075 NC_008595.1 2070648 2074865 R identified by match to protein family HMM PF00175; match to protein family HMM PF00258; match to protein family HMM PF00384; match to protein family HMM PF00667; match to protein family HMM PF01568; match to protein family HMM PF04879; FdhF protein complement(2070648..2074865) Mycobacterium avium 104 4526102 YP_881292.1 CDS MAV_2076 NC_008595.1 2075213 2075680 D LppP protein 2075213..2075680 Mycobacterium avium 104 4529625 YP_881293.1 CDS MAV_2077 NC_008595.1 2075816 2075935 R hypothetical protein complement(2075816..2075935) Mycobacterium avium 104 4527567 YP_881294.1 CDS MAV_2079 NC_008595.1 2075909 2077327 D identified by match to protein family HMM PF07690; transporter, major facilitator family protein 2075909..2077327 Mycobacterium avium 104 4527656 YP_881295.1 CDS MAV_2078 NC_008595.1 2077317 2079269 R identified by match to protein family HMM PF00441; match to protein family HMM PF01756; match to protein family HMM PF02770; acyl-CoA oxidase complement(2077317..2079269) Mycobacterium avium 104 4529275 YP_881296.1 CDS MAV_2081 NC_008595.1 2081676 2082203 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(2081676..2082203) Mycobacterium avium 104 4530627 YP_881297.1 CDS MAV_2082 NC_008595.1 2082385 2084346 D identified by match to protein family HMM PF00005; ABC transporter 2082385..2084346 Mycobacterium avium 104 4528767 YP_881298.1 CDS MAV_2083 NC_008595.1 2084343 2085197 D identified by match to protein family HMM PF02361; cobalt transport protein 2084343..2085197 Mycobacterium avium 104 4530661 YP_881299.1 CDS MAV_2084 NC_008595.1 2085222 2085668 R identified by match to protein family HMM PF01037; AsnC family transcriptional regulator complement(2085222..2085668) Mycobacterium avium 104 4525672 YP_881300.1 CDS MAV_2085 NC_008595.1 2085805 2086659 D identified by match to protein family HMM PF02274; amidinotransferase 2085805..2086659 Mycobacterium avium 104 4525867 YP_881301.1 CDS rocD NC_008595.1 2086656 2087894 D identified by match to protein family HMM PF00202; match to protein family HMM TIGR01885; ornithine--oxo-acid transaminase 2086656..2087894 Mycobacterium avium 104 4525693 YP_881302.1 CDS MAV_2087 NC_008595.1 2087989 2089374 D identified by match to protein family HMM PF00324; amino acid transporter 2087989..2089374 Mycobacterium avium 104 4525612 YP_881303.1 CDS MAV_2088 NC_008595.1 2089380 2090720 R identified by match to protein family HMM PF01547; extracellular solute-binding protein complement(2089380..2090720) Mycobacterium avium 104 4527395 YP_881304.1 CDS uspE NC_008595.1 2090717 2091544 R identified by match to protein family HMM PF00528; ABC transporter permease complement(2090717..2091544) Mycobacterium avium 104 4529746 YP_881305.1 CDS uspA NC_008595.1 2091531 2092415 R identified by match to protein family HMM PF00528; ABC transporter permease complement(2091531..2092415) Mycobacterium avium 104 4526741 YP_881306.1 CDS MAV_2091 NC_008595.1 2092474 2093991 D identified by match to protein family HMM PF01523; modulator of DNA gyrase 2092474..2093991 Mycobacterium avium 104 4529722 YP_881307.1 CDS MAV_2092 NC_008595.1 2093988 2095361 D CalR5 protein 2093988..2095361 Mycobacterium avium 104 4526214 YP_881308.1 CDS MAV_2093 NC_008595.1 2095402 2096268 D hypothetical protein 2095402..2096268 Mycobacterium avium 104 4527361 YP_881309.1 CDS MAV_2094 NC_008595.1 2096523 2096945 D hypothetical protein 2096523..2096945 Mycobacterium avium 104 4529056 YP_881310.1 CDS MAV_2095 NC_008595.1 2097261 2097608 D hypothetical protein 2097261..2097608 Mycobacterium avium 104 4527732 YP_881311.1 CDS MAV_2097 NC_008595.1 2097907 2098518 R identified by match to protein family HMM PF00440; transcriptional regulator complement(2097907..2098518) Mycobacterium avium 104 4529204 YP_881312.1 CDS MAV_2098 NC_008595.1 2098610 2099455 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase 2098610..2099455 Mycobacterium avium 104 4525755 YP_881313.1 CDS MAV_2100 NC_008595.1 2099558 2100883 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 2099558..2100883 Mycobacterium avium 104 4528688 YP_881314.1 CDS MAV_2101 NC_008595.1 2101281 2102687 R identified by match to protein family HMM PF00171; aldehyde dehydrogenase complement(2101281..2102687) Mycobacterium avium 104 4530263 YP_881315.1 CDS MAV_2102 NC_008595.1 2102894 2103811 D hypothetical protein 2102894..2103811 Mycobacterium avium 104 4525943 YP_881316.1 CDS MAV_2104 NC_008595.1 2105517 2107133 R identified by match to protein family HMM PF07690; major facilitator superfamily protein MFS_1 complement(2105517..2107133) Mycobacterium avium 104 4530113 YP_881317.1 CDS MAV_2105 NC_008595.1 2107360 2108049 R hypothetical protein complement(2107360..2108049) Mycobacterium avium 104 4530642 YP_881318.1 CDS MAV_2107 NC_008595.1 2116479 2116637 R hypothetical protein complement(2116479..2116637) Mycobacterium avium 104 4529019 YP_881319.1 CDS MAV_2108 NC_008595.1 2116632 2119139 D identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07228; stage II sporulation protein E (SpoIIE) 2116632..2119139 Mycobacterium avium 104 4528065 YP_881320.1 CDS MAV_2109 NC_008595.1 2119139 2119468 D identified by match to protein family HMM PF01740; StaS domain-containing protein 2119139..2119468 Mycobacterium avium 104 4529301 YP_881321.1 CDS MAV_2110 NC_008595.1 2120140 2121072 D identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein 2120140..2121072 Mycobacterium avium 104 4529628 YP_881322.1 CDS MAV_2111 NC_008595.1 2121069 2121707 D identified by match to protein family HMM PF01209; methyltransferase, UbiE/COQ5 family protein 2121069..2121707 Mycobacterium avium 104 4530096 YP_881323.1 CDS MAV_2113 NC_008595.1 2122193 2122558 D hypothetical protein 2122193..2122558 Mycobacterium avium 104 4526727 YP_881324.1 CDS MAV_2114 NC_008595.1 2122688 2123401 D identified by match to protein family HMM PF01988; mebrane associated protein 2122688..2123401 Mycobacterium avium 104 4528455 YP_881325.1 CDS MAV_2115 NC_008595.1 2123500 2124351 D hypothetical protein 2123500..2124351 Mycobacterium avium 104 4526168 YP_881326.1 CDS MAV_2116 NC_008595.1 2124348 2125880 D identified by match to protein family HMM PF00501; AMP-binding enzyme, putative 2124348..2125880 Mycobacterium avium 104 4530195 YP_881327.1 CDS MAV_2117 NC_008595.1 2126008 2126628 R identified by match to protein family HMM TIGR03083; match to protein family HMM TIGR03085; hypothetical protein complement(2126008..2126628) Mycobacterium avium 104 4530762 YP_881328.1 CDS MAV_2118 NC_008595.1 2126713 2128647 D molecular chaperone; heat shock protein 90 2126713..2128647 Mycobacterium avium 104 4528653 YP_881329.1 CDS MAV_2119 NC_008595.1 2128717 2128932 D hypothetical protein 2128717..2128932 Mycobacterium avium 104 4528027 YP_881330.1 CDS MAV_2121 NC_008595.1 2129033 2130058 D identified by match to protein family HMM PF00296; hypothetical protein 2129033..2130058 Mycobacterium avium 104 4530283 YP_881331.1 CDS MAV_2120 NC_008595.1 2130048 2131703 R identified by match to protein family HMM PF01566; Mn2+/Fe2+ transporter complement(2130048..2131703) Mycobacterium avium 104 4527222 YP_881332.1 CDS MAV_2122 NC_008595.1 2131700 2133022 R identified by match to protein family HMM PF00571; match to protein family HMM PF03448; MgtE intracellular domain-contain protein complement(2131700..2133022) Mycobacterium avium 104 4529982 YP_881333.1 CDS MAV_2123 NC_008595.1 2133191 2133934 R PknM protein complement(2133191..2133934) Mycobacterium avium 104 4526743 YP_881334.1 CDS MAV_2124 NC_008595.1 2134075 2134434 D identified by match to protein family HMM PF00903; glyoxalase 2134075..2134434 Mycobacterium avium 104 4526210 YP_881335.1 CDS MAV_2125 NC_008595.1 2134435 2135331 R hypothetical protein complement(2134435..2135331) Mycobacterium avium 104 4530720 YP_881336.1 CDS MAV_2126 NC_008595.1 2135385 2135777 R membrane protein complement(2135385..2135777) Mycobacterium avium 104 4529145 YP_881337.1 CDS MAV_2127 NC_008595.1 2135984 2137159 D identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; acetyl-CoA C-acyltransferase 2135984..2137159 Mycobacterium avium 104 4525611 YP_881338.1 CDS MAV_2128 NC_008595.1 2137167 2137721 R hypothetical protein complement(2137167..2137721) Mycobacterium avium 104 4526103 YP_881339.1 CDS MAV_2129 NC_008595.1 2137884 2138612 D identified by similarity to SP:P22255; match to protein family HMM PF00459; 3'(2'),5'-bisphosphate nucleotidase, putative 2137884..2138612 Mycobacterium avium 104 4528665 YP_881340.1 CDS MAV_2130 NC_008595.1 2138689 2139621 R identified by match to protein family HMM PF00561; haloalkane dehalogenase complement(2138689..2139621) Mycobacterium avium 104 4526106 YP_881341.1 CDS MAV_2131 NC_008595.1 2139708 2140436 D hypothetical protein 2139708..2140436 Mycobacterium avium 104 4528172 YP_881342.1 CDS MAV_2132 NC_008595.1 2140451 2141656 R identified by match to protein family HMM PF00155; transferase complement(2140451..2141656) Mycobacterium avium 104 4528429 YP_881343.1 CDS MAV_2133 NC_008595.1 2141809 2142786 D identified by match to protein family HMM PF00296; hypothetical protein 2141809..2142786 Mycobacterium avium 104 4528274 YP_881344.1 CDS MAV_2134 NC_008595.1 2142879 2143652 R hypothetical protein complement(2142879..2143652) Mycobacterium avium 104 4525690 YP_881345.1 CDS MAV_2135 NC_008595.1 2143661 2143804 R hypothetical protein complement(2143661..2143804) Mycobacterium avium 104 4527975 YP_881346.1 CDS MAV_2136 NC_008595.1 2143818 2144033 R hypothetical protein complement(2143818..2144033) Mycobacterium avium 104 4528491 YP_881347.1 CDS MAV_2137 NC_008595.1 2144085 2144516 D hypothetical protein 2144085..2144516 Mycobacterium avium 104 4528013 YP_881348.1 CDS MAV_2138 NC_008595.1 2144553 2145761 D identified by match to protein family HMM PF00067; cytochrome P450 superfamily protein 2144553..2145761 Mycobacterium avium 104 4525960 YP_881349.1 CDS MAV_2139 NC_008595.1 2145886 2146875 R identified by match to protein family HMM PF00561; alpha/beta hydrolase complement(2145886..2146875) Mycobacterium avium 104 4525981 YP_881350.1 CDS MAV_2140 NC_008595.1 2146920 2147438 R LppO protein complement(2146920..2147438) Mycobacterium avium 104 4525870 YP_881351.1 CDS MAV_2141 NC_008595.1 2147596 2148324 R hypothetical protein complement(2147596..2148324) Mycobacterium avium 104 4528270 YP_881352.1 CDS MAV_2142 NC_008595.1 2148498 2149352 R identified by match to protein family HMM PF00581; thiosulfate sulfurtransferase complement(2148498..2149352) Mycobacterium avium 104 4526260 YP_881353.1 CDS MAV_2143 NC_008595.1 2149509 2150654 R identified by match to protein family HMM PF00534; glycosyl transferase complement(2149509..2150654) Mycobacterium avium 104 4530325 YP_881354.1 CDS MAV_2144 NC_008595.1 2150771 2151979 R hypothetical protein complement(2150771..2151979) Mycobacterium avium 104 4527413 YP_881355.1 CDS MAV_2145 NC_008595.1 2151989 2153599 R identified by match to protein family HMM PF00999; match to protein family HMM TIGR00831; Na+/H+ antiporter complement(2151989..2153599) Mycobacterium avium 104 4528695 YP_881356.1 CDS MAV_2147 NC_008595.1 2153732 2154166 D hypothetical protein 2153732..2154166 Mycobacterium avium 104 4528487 YP_881357.1 CDS MAV_2146 NC_008595.1 2154147 2155439 R identified by match to protein family HMM PF07859; alpha/beta hydrolase complement(2154147..2155439) Mycobacterium avium 104 4525832 YP_881358.1 CDS MAV_2148 NC_008595.1 2155642 2155938 D identified by match to protein family HMM PF05534; HicB family protein 2155642..2155938 Mycobacterium avium 104 4530506 YP_881359.1 CDS MAV_2149 NC_008595.1 2155991 2157265 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 2155991..2157265 Mycobacterium avium 104 4530121 YP_881360.1 CDS MAV_2150 NC_008595.1 2157450 2157776 R identified by match to protein family HMM PF00037; ferredoxin complement(2157450..2157776) Mycobacterium avium 104 4527493 YP_881361.1 CDS MAV_2151 NC_008595.1 2157993 2158940 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 2157993..2158940 Mycobacterium avium 104 4526932 YP_881362.1 CDS MAV_2152 NC_008595.1 2158942 2159658 R identified by match to protein family HMM PF01903; hypothetical protein complement(2158942..2159658) Mycobacterium avium 104 4529734 YP_881363.1 CDS MAV_2153 NC_008595.1 2159655 2160398 R catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase complement(2159655..2160398) Mycobacterium avium 104 4526626 YP_881364.1 CDS MAV_2154 NC_008595.1 2160413 2162080 R identified by match to protein family HMM PF01077; match to protein family HMM PF03460; sulfite reductase [ferredoxin] 1 complement(2160413..2162080) Mycobacterium avium 104 4529496 YP_881365.1 CDS MAV_2155 NC_008595.1 2162081 2162215 D hypothetical protein 2162081..2162215 Mycobacterium avium 104 4528115 YP_881366.1 CDS MAV_2156 NC_008595.1 2162442 2163755 R identified by match to protein family HMM PF00067; P450 heme-thiolate protein complement(2162442..2163755) Mycobacterium avium 104 4525523 YP_881367.1 CDS MAV_2157 NC_008595.1 2163877 2164539 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2163877..2164539 Mycobacterium avium 104 4526352 YP_881368.1 CDS MAV_2158 NC_008595.1 2164735 2166195 D identified by match to protein family HMM PF00069; serine/threonine protein kinase 2164735..2166195 Mycobacterium avium 104 4526583 YP_881369.1 CDS MAV_2159 NC_008595.1 2166394 2167641 R identified by match to protein family HMM PF00067; cytochrome P450 superfamily protein complement(2166394..2167641) Mycobacterium avium 104 4530182 YP_881370.1 CDS MAV_2160 NC_008595.1 2167605 2167949 D identified by match to protein family HMM PF01527; ISAfe7, transposase OrfA 2167605..2167949 Mycobacterium avium 104 4527871 YP_881371.1 CDS MAV_2161 NC_008595.1 2168027 2168866 D identified by match to protein family HMM PF00665; transposase 2168027..2168866 Mycobacterium avium 104 4527032 YP_881372.1 CDS MAV_2163 NC_008595.1 2168915 2169253 D transposase 2168915..2169253 Mycobacterium avium 104 4526044 YP_881373.1 CDS MAV_2162 NC_008595.1 2169243 2169782 R serine/threonine protein kinase complement(2169243..2169782) Mycobacterium avium 104 4530787 YP_881374.1 CDS pcaC NC_008595.1 2169887 2170408 D identified by match to protein family HMM PF02627; hypothetical protein 2169887..2170408 Mycobacterium avium 104 4527173 YP_881375.1 CDS pcaC NC_008595.1 2170405 2170950 D identified by match to protein family HMM PF02627; hypothetical protein 2170405..2170950 Mycobacterium avium 104 4525585 YP_881376.1 CDS MAV_2167 NC_008595.1 2171071 2171601 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2171071..2171601 Mycobacterium avium 104 4526470 YP_881377.1 CDS MAV_2166 NC_008595.1 2171590 2172753 R identified by match to protein family HMM PF08028; acyl-CoA dehydrogenase domain-containing protein complement(2171590..2172753) Mycobacterium avium 104 4530645 YP_881378.1 CDS MAV_2168 NC_008595.1 2172818 2173594 D identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase 2172818..2173594 Mycobacterium avium 104 4529774 YP_881379.1 CDS MAV_2169 NC_008595.1 2173607 2174365 R identified by match to protein family HMM PF01083; serine esterase cutinase complement(2173607..2174365) Mycobacterium avium 104 4530599 YP_881380.1 CDS MAV_2170 NC_008595.1 2174601 2174843 D acyl carrier protein 2174601..2174843 Mycobacterium avium 104 4529467 YP_881381.1 CDS MAV_2172 NC_008595.1 2175108 2176595 D identified by match to protein family HMM PF01266; FAD dependent oxidoreductase, putative 2175108..2176595 Mycobacterium avium 104 4526861 YP_881382.1 CDS MAV_2171 NC_008595.1 2176592 2177059 R LppN protein complement(2176592..2177059) Mycobacterium avium 104 4526108 YP_881383.1 CDS MAV_2173 NC_008595.1 2177095 2177637 R identified by match to protein family HMM PF07366; hypothetical protein complement(2177095..2177637) Mycobacterium avium 104 4528702 YP_881384.1 CDS MAV_2174 NC_008595.1 2177785 2179092 R identified by match to protein family HMM PF00067; P450 heme-thiolate protein complement(2177785..2179092) Mycobacterium avium 104 4527302 YP_881385.1 CDS MAV_2175 NC_008595.1 2179124 2179471 R hypothetical protein complement(2179124..2179471) Mycobacterium avium 104 4526513 YP_881386.1 CDS dapB NC_008595.1 2179548 2180645 D identified by match to protein family HMM PF01113; dihydrodipicolinate reductase N-terminus domain-containing protein 2179548..2180645 Mycobacterium avium 104 4529518 YP_881387.1 CDS MAV_2177 NC_008595.1 2180755 2182422 D hypothetical protein 2180755..2182422 Mycobacterium avium 104 4527283 YP_881388.1 CDS MAV_2178 NC_008595.1 2182435 2182782 R hypothetical protein complement(2182435..2182782) Mycobacterium avium 104 4527444 YP_881389.1 CDS MAV_2179 NC_008595.1 2182874 2183941 R hypothetical protein complement(2182874..2183941) Mycobacterium avium 104 4529893 YP_881390.1 CDS MAV_2180 NC_008595.1 2184034 2184660 R identified by match to protein family HMM PF00753; metallo-beta-lactamase complement(2184034..2184660) Mycobacterium avium 104 4529665 YP_881391.1 CDS MAV_2182 NC_008595.1 2185820 2186881 D identified by match to protein family HMM PF02390; transcriptional regulator 2185820..2186881 Mycobacterium avium 104 4527585 YP_881392.1 CDS MAV_2183 NC_008595.1 2186881 2187699 D identified by match to protein family HMM PF00144; beta-lactamase 2186881..2187699 Mycobacterium avium 104 4528347 YP_881393.1 CDS MAV_2185 NC_008595.1 2187830 2188363 D hypothetical protein 2187830..2188363 Mycobacterium avium 104 4529336 YP_881394.1 CDS MAV_2184 NC_008595.1 2188360 2189292 R involved in the biosynthesis of phosphatidylinositol mannosides (PIMs); the enzyme from Mycobacterium tuberculosis can phosphorylate a variety of amphipathic lipids; diacylglycerol kinase complement(2188360..2189292) Mycobacterium avium 104 4528170 YP_881395.1 CDS MAV_2186 NC_008595.1 2189289 2190899 R identified by match to protein family HMM PF01565; match to protein family HMM PF02913; flavoprotein complement(2189289..2190899) Mycobacterium avium 104 4527989 YP_881396.1 CDS MAV_2187 NC_008595.1 2190917 2191498 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2190917..2191498 Mycobacterium avium 104 4528266 YP_881397.1 CDS MAV_2188 NC_008595.1 2191495 2193036 D identified by match to protein family HMM PF01266; glycerol-3-phosphate dehydrogenase 1 2191495..2193036 Mycobacterium avium 104 4530131 YP_881398.1 CDS MAV_2189 NC_008595.1 2193130 2194650 D identified by match to protein family HMM PF01266; match to protein family HMM PF01494; FAD binding domain-containing protein 2193130..2194650 Mycobacterium avium 104 4528691 YP_881399.1 CDS MAV_2190 NC_008595.1 2194729 2196150 R identified by match to protein family HMM PF01039; propionyl-CoA carboxylase beta chain complement(2194729..2196150) Mycobacterium avium 104 4529817 YP_881400.2 CDS MAV_2191 NC_008595.1 2196192 2197514 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II complement(2196192..2197514) Mycobacterium avium 104 4525825 YP_881401.2 CDS MAV_2192 NC_008595.1 2197533 2198783 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II complement(2197533..2198783) Mycobacterium avium 104 4526235 YP_881402.1 CDS acpP NC_008595.1 2198780 2199127 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(2198780..2199127) Mycobacterium avium 104 4527417 YP_881403.1 CDS MAV_2194 NC_008595.1 2199204 2200112 R malonyl CoA-acyl carrier protein transacylase complement(2199204..2200112) Mycobacterium avium 104 4529896 YP_881404.1 CDS MAV_2195 NC_008595.1 2200253 2201578 R hypothetical protein complement(2200253..2201578) Mycobacterium avium 104 4530641 YP_881405.1 CDS aceE NC_008595.1 2201862 2204651 R E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 complement(2201862..2204651) Mycobacterium avium 104 4528469 YP_881406.1 CDS MAV_2197 NC_008595.1 2204902 2205411 D hypothetical protein 2204902..2205411 Mycobacterium avium 104 4527999 YP_881407.1 CDS MAV_2198 NC_008595.1 2205508 2205930 D hypothetical protein 2205508..2205930 Mycobacterium avium 104 4527873 YP_881408.1 CDS MAV_2199 NC_008595.1 2205930 2206391 D identified by match to protein family HMM PF00578; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2205930..2206391 Mycobacterium avium 104 4526022 YP_881409.1 CDS MAV_2200 NC_008595.1 2206470 2207261 R identified by match to protein family HMM PF01955; adenosylcobinamide amidohydrolase complement(2206470..2207261) Mycobacterium avium 104 4525712 YP_881410.1 CDS MAV_2202 NC_008595.1 2207360 2208478 D identified by match to protein family HMM PF00561; match to protein family HMM PF06441; epoxide hydrolase 2207360..2208478 Mycobacterium avium 104 4527069 YP_881411.1 CDS MAV_2203 NC_008595.1 2208485 2209300 R hypothetical protein complement(2208485..2209300) Mycobacterium avium 104 4527341 YP_881412.1 CDS cobD NC_008595.1 2209353 2210297 D CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 2209353..2210297 Mycobacterium avium 104 4529712 YP_881413.1 CDS MAV_2204 NC_008595.1 2210279 2211109 R hypothetical protein complement(2210279..2211109) Mycobacterium avium 104 4526776 YP_881414.1 CDS MAV_2206 NC_008595.1 2211109 2211600 R identified by match to protein family HMM PF01451; low molecular weight protein-tyrosine-phosphatase complement(2211109..2211600) Mycobacterium avium 104 4530056 YP_881415.1 CDS MAV_2207 NC_008595.1 2211593 2212261 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549; hypothetical protein complement(2211593..2212261) Mycobacterium avium 104 4528738 YP_881416.1 CDS MAV_2208 NC_008595.1 2212352 2213380 D identified by match to protein family HMM PF00155; hypothetical protein 2212352..2213380 Mycobacterium avium 104 4525894 YP_881417.1 CDS MAV_2209 NC_008595.1 2213377 2214513 D identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; hypothetical protein 2213377..2214513 Mycobacterium avium 104 4530287 YP_881418.1 CDS MAV_2210 NC_008595.1 2214510 2215247 D identified by match to protein family HMM PF02591; hypothetical protein 2214510..2215247 Mycobacterium avium 104 4530351 YP_881419.1 CDS MAV_2211 NC_008595.1 2215244 2216395 D identified by match to protein family HMM PF00075; match to protein family HMM PF00300; bifunctional RNase H/acid phosphatase 2215244..2216395 Mycobacterium avium 104 4530186 YP_881420.1 CDS MAV_2213 NC_008595.1 2216639 2217808 R identified by match to protein family HMM PF00067; cytochrome P450 superfamily protein complement(2216639..2217808) Mycobacterium avium 104 4529996 YP_881421.1 CDS MAV_2214 NC_008595.1 2217856 2218425 R identified by match to protein family HMM PF01381; match to protein family HMM PF07883; regulatory protein complement(2217856..2218425) Mycobacterium avium 104 4529609 YP_881422.1 CDS cheR NC_008595.1 2218472 2219122 D identified by match to protein family HMM PF01739; match to protein family HMM PF03848; match to protein family HMM PF05724; CheR methyltransferase SAM binding domain-containing protein 2218472..2219122 Mycobacterium avium 104 4529497 YP_881423.1 CDS MAV_2215 NC_008595.1 2219107 2219826 R hypothetical protein complement(2219107..2219826) Mycobacterium avium 104 4529584 YP_881424.1 CDS MAV_2217 NC_008595.1 2220320 2221468 R identified by match to protein family HMM PF00589; integrase fusion protein complement(2220320..2221468) Mycobacterium avium 104 4527682 YP_881425.1 CDS MAV_2218 NC_008595.1 2221770 2221979 D hypothetical protein 2221770..2221979 Mycobacterium avium 104 4529305 YP_881426.1 CDS MAV_2219 NC_008595.1 2222134 2222484 D hypothetical protein 2222134..2222484 Mycobacterium avium 104 4528510 YP_881427.1 CDS MAV_2220 NC_008595.1 2222704 2224029 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(2222704..2224029) Mycobacterium avium 104 4526576 YP_881428.1 CDS MAV_2221 NC_008595.1 2224077 2224430 D transposase 2224077..2224430 Mycobacterium avium 104 4527263 YP_881429.1 CDS MAV_2223 NC_008595.1 2226224 2227528 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(2226224..2227528) Mycobacterium avium 104 4529337 YP_881430.1 CDS MAV_2225 NC_008595.1 2228526 2230199 R identified by match to protein family HMM PF07669; type III restriction system endonuclease, putative complement(2228526..2230199) Mycobacterium avium 104 4530632 YP_881431.1 CDS MAV_2226 NC_008595.1 2230196 2230432 R type III restriction system methylase complement(2230196..2230432) Mycobacterium avium 104 4526988 YP_881432.1 CDS MAV_2227 NC_008595.1 2231000 2232325 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 2231000..2232325 Mycobacterium avium 104 4529793 YP_881433.1 CDS MAV_2228 NC_008595.1 2232453 2233265 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 2232453..2233265 Mycobacterium avium 104 4527297 YP_881434.1 CDS MAV_2229 NC_008595.1 2233374 2234678 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 2233374..2234678 Mycobacterium avium 104 4530639 YP_881435.1 CDS MAV_2230 NC_008595.1 2234810 2236084 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 2234810..2236084 Mycobacterium avium 104 4529098 YP_881436.1 CDS MAV_2231 NC_008595.1 2236157 2236627 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 2236157..2236627 Mycobacterium avium 104 4529404 YP_881437.1 CDS MAV_2232 NC_008595.1 2237339 2238490 D hypothetical protein 2237339..2238490 Mycobacterium avium 104 4529039 YP_881438.1 CDS MAV_2233 NC_008595.1 2238755 2239840 D hypothetical protein 2238755..2239840 Mycobacterium avium 104 4526010 YP_881439.1 CDS MAV_2234 NC_008595.1 2239889 2241163 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 2239889..2241163 Mycobacterium avium 104 4528903 YP_881440.1 CDS MAV_2235 NC_008595.1 2241608 2243248 R identified by match to protein family HMM PF01928; match to protein family HMM PF05235; adenylate cyclase, putative complement(2241608..2243248) Mycobacterium avium 104 4529503 YP_881441.1 CDS MAV_2236 NC_008595.1 2243364 2243615 R hypothetical protein complement(2243364..2243615) Mycobacterium avium 104 4530763 YP_881442.1 CDS MAV_2237 NC_008595.1 2243815 2244219 D hypothetical protein 2243815..2244219 Mycobacterium avium 104 4527347 YP_881443.1 CDS panB NC_008595.1 2245609 2246466 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(2245609..2246466) Mycobacterium avium 104 4527505 YP_881444.1 CDS MAV_2240 NC_008595.1 2246608 2248008 D identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; acyltransferase, ws/dgat/mgat subfamily protein 2246608..2248008 Mycobacterium avium 104 4526179 YP_881445.1 CDS MAV_2241 NC_008595.1 2248060 2249622 D identified by match to protein family HMM PF00561; alpha/beta hydrolase 2248060..2249622 Mycobacterium avium 104 4528479 YP_881446.1 CDS MAV_2242 NC_008595.1 2249616 2249735 D hypothetical protein 2249616..2249735 Mycobacterium avium 104 4526115 YP_881447.1 CDS MAV_2243 NC_008595.1 2249782 2251341 D identified by match to protein family HMM PF00561; alpha/beta hydrolase 2249782..2251341 Mycobacterium avium 104 4529271 YP_881448.1 CDS glnA NC_008595.1 2251424 2252764 D identified by similarity to SP:P12425; match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase, type I 2251424..2252764 Mycobacterium avium 104 4530801 YP_881449.1 CDS MAV_2245 NC_008595.1 2252830 2255826 D catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 2252830..2255826 Mycobacterium avium 104 4530375 YP_881450.1 CDS MAV_2246 NC_008595.1 2255844 2256467 D identified by match to protein family HMM PF03061; thioesterase 2255844..2256467 Mycobacterium avium 104 4530703 YP_881451.1 CDS MAV_2247 NC_008595.1 2256464 2257324 D identified by match to protein family HMM PF00296; hypothetical protein 2256464..2257324 Mycobacterium avium 104 4530548 YP_881452.1 CDS MAV_2248 NC_008595.1 2257897 2258457 R hypothetical protein complement(2257897..2258457) Mycobacterium avium 104 4526163 YP_881453.1 CDS MAV_2249 NC_008595.1 2258710 2259093 D hypothetical protein 2258710..2259093 Mycobacterium avium 104 4525846 YP_881454.1 CDS MAV_2250 NC_008595.1 2259120 2259542 R hypothetical protein complement(2259120..2259542) Mycobacterium avium 104 4530047 YP_881455.1 CDS MAV_2251 NC_008595.1 2259543 2260010 R hypothetical protein complement(2259543..2260010) Mycobacterium avium 104 4527833 YP_881456.1 CDS MAV_2252 NC_008595.1 2260387 2260599 R hypothetical protein complement(2260387..2260599) Mycobacterium avium 104 4527773 YP_881457.1 CDS MAV_2253 NC_008595.1 2260810 2260971 D hypothetical protein 2260810..2260971 Mycobacterium avium 104 4526380 YP_881458.1 CDS MAV_2254 NC_008595.1 2260972 2262036 D hypothetical protein 2260972..2262036 Mycobacterium avium 104 4527821 YP_881459.1 CDS MAV_2255 NC_008595.1 2262112 2262303 D hypothetical protein 2262112..2262303 Mycobacterium avium 104 4529607 YP_881460.1 CDS MAV_2256 NC_008595.1 2262448 2262837 D gp108 protein 2262448..2262837 Mycobacterium avium 104 4527777 YP_881461.1 CDS MAV_2257 NC_008595.1 2263587 2263802 R hypothetical protein complement(2263587..2263802) Mycobacterium avium 104 4526758 YP_881462.1 CDS MAV_2258 NC_008595.1 2263879 2265204 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(2263879..2265204) Mycobacterium avium 104 4529735 YP_881463.1 CDS MAV_2259 NC_008595.1 2265246 2265518 R hypothetical protein complement(2265246..2265518) Mycobacterium avium 104 4528933 YP_881464.1 CDS MAV_2260 NC_008595.1 2265779 2266129 D serine/threonine protein kinase 2265779..2266129 Mycobacterium avium 104 4526777 YP_881465.1 CDS MAV_2261 NC_008595.1 2267086 2267430 D identified by match to protein family HMM PF01527; ISAfe7, transposase OrfA 2267086..2267430 Mycobacterium avium 104 4528125 YP_881466.1 CDS MAV_2262 NC_008595.1 2267508 2268347 D identified by match to protein family HMM PF00665; transposase 2267508..2268347 Mycobacterium avium 104 4526374 YP_881467.1 CDS MAV_2263 NC_008595.1 2269209 2269544 R hypothetical protein complement(2269209..2269544) Mycobacterium avium 104 4529280 YP_881468.1 CDS MAV_2264 NC_008595.1 2269541 2269735 R hypothetical protein complement(2269541..2269735) Mycobacterium avium 104 4527798 YP_881469.1 CDS MAV_2265 NC_008595.1 2269834 2270418 D identified by match to protein family HMM PF01381; prophage regulatory ptotein 2269834..2270418 Mycobacterium avium 104 4526675 YP_881470.1 CDS MAV_2266 NC_008595.1 2270402 2271610 D identified by match to protein family HMM PF00589; phage-related integrase 2270402..2271610 Mycobacterium avium 104 4528066 YP_881471.1 CDS glnA NC_008595.1 2271617 2273053 R identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase, type I complement(2271617..2273053) Mycobacterium avium 104 4527066 YP_881472.1 CDS MAV_2268 NC_008595.1 2273298 2273720 D identified by match to protein family HMM PF06271; RDD family protein, putative 2273298..2273720 Mycobacterium avium 104 4527495 YP_881473.1 CDS MAV_2269 NC_008595.1 2273779 2274531 R integral membrane protein complement(2273779..2274531) Mycobacterium avium 104 4525886 YP_881474.1 CDS lipA NC_008595.1 2274560 2275483 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(2274560..2275483) Mycobacterium avium 104 4527880 YP_881475.1 CDS lipB NC_008595.1 2275480 2276181 R lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B complement(2275480..2276181) Mycobacterium avium 104 4528204 YP_881476.1 CDS MAV_2272 NC_008595.1 2276231 2277154 R identified by match to protein family HMM PF01370; match to protein family HMM TIGR01777; hypothetical protein complement(2276231..2277154) Mycobacterium avium 104 4527306 YP_881477.1 CDS sucB NC_008595.1 2277171 2278961 R identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; match to protein family HMM TIGR02927; dihydrolipoamide acetyltransferase complement(2277171..2278961) Mycobacterium avium 104 4528259 YP_881478.1 CDS MAV_2274 NC_008595.1 2279041 2279202 R hypothetical protein complement(2279041..2279202) Mycobacterium avium 104 4529863 YP_881479.1 CDS MAV_2275 NC_008595.1 2279185 2280963 D identified by match to protein family HMM PF00106; match to protein family HMM PF00561; short chain dehydrogenase 2279185..2280963 Mycobacterium avium 104 4527882 YP_881480.1 CDS MAV_2276 NC_008595.1 2281007 2281348 R hypothetical protein complement(2281007..2281348) Mycobacterium avium 104 4526919 YP_881481.1 CDS MAV_2277 NC_008595.1 2281497 2281946 D hypothetical protein 2281497..2281946 Mycobacterium avium 104 4527041 YP_881482.1 CDS MAV_2278 NC_008595.1 2282020 2282136 R hypothetical protein complement(2282020..2282136) Mycobacterium avium 104 4528675 YP_881483.1 CDS MAV_2279 NC_008595.1 2282147 2283703 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(2282147..2283703) Mycobacterium avium 104 4527600 YP_881484.1 CDS gcvT NC_008595.1 2283745 2284848 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 2283745..2284848 Mycobacterium avium 104 4528286 YP_881485.1 CDS ilvE NC_008595.1 2284903 2286018 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 2284903..2286018 Mycobacterium avium 104 4529657 YP_881486.1 CDS cobS NC_008595.1 2286191 2286946 R catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase complement(2286191..2286946) Mycobacterium avium 104 4526814 YP_881487.1 CDS cobT NC_008595.1 2286943 2287992 R catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(2286943..2287992) Mycobacterium avium 104 4526827 YP_881488.1 CDS cobU NC_008595.1 2287992 2288528 R identified by match to protein family HMM PF02283; cobinamide kinase / cobinamide phosphate guanyltransferase complement(2287992..2288528) Mycobacterium avium 104 4528063 YP_881489.1 CDS MAV_2285 NC_008595.1 2288556 2289248 R hypothetical protein complement(2288556..2289248) Mycobacterium avium 104 4530569 YP_881490.1 CDS MAV_2286 NC_008595.1 2289452 2290516 D identified by match to protein family HMM PF02595; match to protein family HMM TIGR00045; glycerate kinase subfamily protein 2289452..2290516 Mycobacterium avium 104 4529907 YP_881491.1 CDS MAV_2287 NC_008595.1 2290614 2290970 D identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; HesB/YadR/YfhF family protein 2290614..2290970 Mycobacterium avium 104 4530393 YP_881492.1 CDS MAV_2288 NC_008595.1 2290997 2291674 R hypothetical protein complement(2290997..2291674) Mycobacterium avium 104 4529816 YP_881493.1 CDS MAV_2289 NC_008595.1 2291854 2292828 D identified by match to protein family HMM PF00294; adenosine kinase 2291854..2292828 Mycobacterium avium 104 4527483 YP_881494.1 CDS asnB NC_008595.1 2292850 2294781 R identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536; asparagine synthase (glutamine-hydrolyzing) complement(2292850..2294781) Mycobacterium avium 104 4525613 YP_881495.1 CDS MAV_2291 NC_008595.1 2294975 2295985 D identified by match to protein family HMM PF00116; cytochrome C oxidase, subunit 2 2294975..2295985 Mycobacterium avium 104 4526447 YP_881496.1 CDS MAV_2292 NC_008595.1 2295999 2296418 D cytochrome C oxidase polypeptide 4 2295999..2296418 Mycobacterium avium 104 4530427 YP_881497.1 CDS MAV_2293 NC_008595.1 2296608 2297408 D MmpS3 protein 2296608..2297408 Mycobacterium avium 104 4528023 YP_881498.1 CDS MAV_2294 NC_008595.1 2297408 2298040 D hypothetical protein 2297408..2298040 Mycobacterium avium 104 4526897 YP_881499.1 CDS MAV_2295 NC_008595.1 2298223 2298666 D hypothetical protein 2298223..2298666 Mycobacterium avium 104 4527384 YP_881500.1 CDS MAV_2296 NC_008595.1 2298701 2300401 R petB; identified by match to protein family HMM PF00033; cytochrome b6 complement(2298701..2300401) Mycobacterium avium 104 4529990 YP_881501.1 CDS MAV_2297 NC_008595.1 2300398 2301603 R identified by match to protein family HMM PF00355; ubiquinol-cytochrome C reductase, iron-sulfur subunit QcrA complement(2300398..2301603) Mycobacterium avium 104 4530754 YP_881502.1 CDS MAV_2298 NC_008595.1 2301686 2302513 R identified by match to protein family HMM PF00034; cytochrome C complement(2301686..2302513) Mycobacterium avium 104 4528591 YP_881503.1 CDS MAV_2299 NC_008595.1 2302543 2303085 R identified by match to protein family HMM PF00510; cytochrome C oxidase, subunit 3 complement(2302543..2303085) Mycobacterium avium 104 4526175 YP_881504.1 CDS trpD NC_008595.1 2303182 2304405 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2303182..2304405 Mycobacterium avium 104 4530293 YP_881505.1 CDS MAV_2300 NC_008595.1 2304280 2306211 R contains 3'-5'exonuclease domain; hypothetical protein complement(2304280..2306211) Mycobacterium avium 104 4527195 YP_881506.1 CDS MAV_2302 NC_008595.1 2306257 2306430 D hypothetical protein 2306257..2306430 Mycobacterium avium 104 4529509 YP_881507.1 CDS MAV_2303 NC_008595.1 2306424 2306618 D hypothetical protein 2306424..2306618 Mycobacterium avium 104 4530041 YP_881508.1 CDS MAV_2304 NC_008595.1 2306928 2307956 D identified by match to protein family HMM PF00877; NLP/P60 family protein 2306928..2307956 Mycobacterium avium 104 4529978 YP_881509.1 CDS MAV_2305 NC_008595.1 2307988 2308818 D hypothetical protein 2307988..2308818 Mycobacterium avium 104 4529768 YP_881510.1 CDS MAV_2306 NC_008595.1 2308856 2309989 D identified by match to protein family HMM PF00534; glycosyl transferase, group 1 2308856..2309989 Mycobacterium avium 104 4526463 YP_881511.1 CDS MAV_2307 NC_008595.1 2310149 2311951 R identified by match to protein family HMM PF00501; acyl-CoA dehydrogenase complement(2310149..2311951) Mycobacterium avium 104 4526804 YP_881512.1 CDS MAV_2308 NC_008595.1 2312112 2312516 D hypothetical protein 2312112..2312516 Mycobacterium avium 104 4528260 YP_881513.1 CDS MAV_2309 NC_008595.1 2312632 2313069 D identified by match to protein family HMM PF03364; cyclase/dehydrase 2312632..2313069 Mycobacterium avium 104 4530070 YP_881514.1 CDS MAV_2310 NC_008595.1 2313164 2314342 D identified by match to protein family HMM PF02374; anion-transporting ATPase 2313164..2314342 Mycobacterium avium 104 4527217 YP_881515.1 CDS MAV_2311 NC_008595.1 2314339 2314728 D hypothetical protein 2314339..2314728 Mycobacterium avium 104 4529756 YP_881516.1 CDS MAV_2313 NC_008595.1 2314816 2315541 D identified by match to protein family HMM PF01553; 1-acylglycerol-3-phosphate O-acyltransferase 2314816..2315541 Mycobacterium avium 104 4530445 YP_881517.1 CDS MAV_2312 NC_008595.1 2315538 2316710 R hypothetical protein complement(2315538..2316710) Mycobacterium avium 104 4529046 YP_881518.1 CDS MAV_2314 NC_008595.1 2316934 2317803 D hypothetical protein 2316934..2317803 Mycobacterium avium 104 4529689 YP_881519.1 CDS MAV_2315 NC_008595.1 2317824 2318312 D hypothetical protein 2317824..2318312 Mycobacterium avium 104 4527266 YP_881520.1 CDS MAV_2317 NC_008595.1 2318404 2319792 D identified by match to protein family HMM PF01474; match to protein family HMM TIGR01358; 3-deoxy-7-phosphoheptulonate synthase 2318404..2319792 Mycobacterium avium 104 4530513 YP_881521.1 CDS MAV_2316 NC_008595.1 2319789 2321234 R hypothetical protein complement(2319789..2321234) Mycobacterium avium 104 4527997 YP_881522.1 CDS MAV_2318 NC_008595.1 2321369 2322655 R identified by match to protein family HMM PF00069; match to protein family HMM PF01163; serine/threonine protein kinase complement(2321369..2322655) Mycobacterium avium 104 4529820 YP_881523.1 CDS MAV_2320 NC_008595.1 2322762 2323139 D hypothetical protein 2322762..2323139 Mycobacterium avium 104 4528569 YP_881524.1 CDS MAV_2319 NC_008595.1 2323133 2324650 R integral membrane protein complement(2323133..2324650) Mycobacterium avium 104 4526226 YP_881525.1 CDS MAV_2321 NC_008595.1 2324655 2325704 R identified by match to protein family HMM PF00348; polyprenyl synthetase complement(2324655..2325704) Mycobacterium avium 104 4529410 YP_881526.1 CDS MAV_2322 NC_008595.1 2325970 2326863 D hypothetical protein 2325970..2326863 Mycobacterium avium 104 4528833 YP_881527.1 CDS MAV_2323 NC_008595.1 2326867 2327547 R LppM protein complement(2326867..2327547) Mycobacterium avium 104 4525777 YP_881528.1 CDS MAV_2324 NC_008595.1 2327667 2328269 R identified by match to protein family HMM PF00583; acetyltransferase, gnat family protein complement(2327667..2328269) Mycobacterium avium 104 4530544 YP_881529.1 CDS MAV_2325 NC_008595.1 2328662 2329063 D hypothetical protein 2328662..2329063 Mycobacterium avium 104 4529897 YP_881530.1 CDS MAV_2326 NC_008595.1 2329245 2329412 R hypothetical protein complement(2329245..2329412) Mycobacterium avium 104 4527484 YP_881531.1 CDS mraZ NC_008595.1 2329500 2329931 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 2329500..2329931 Mycobacterium avium 104 4528506 YP_881532.1 CDS mraW NC_008595.1 2330059 2331066 D identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 2330059..2331066 Mycobacterium avium 104 4527633 YP_881533.1 CDS MAV_2329 NC_008595.1 2331066 2332340 D hypothetical protein 2331066..2332340 Mycobacterium avium 104 4529513 YP_881534.1 CDS MAV_2330 NC_008595.1 2332409 2334328 D identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin binding protein transpeptidase domain-containing protein 2332409..2334328 Mycobacterium avium 104 4528359 YP_881535.1 CDS murE NC_008595.1 2334431 2335993 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 2334431..2335993 Mycobacterium avium 104 4526429 YP_881536.1 CDS MAV_2332 NC_008595.1 2335990 2337591 D identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 2335990..2337591 Mycobacterium avium 104 4528432 YP_881537.1 CDS mraY NC_008595.1 2337588 2338667 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 2337588..2338667 Mycobacterium avium 104 4525877 YP_881538.1 CDS murD NC_008595.1 2338667 2340136 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 2338667..2340136 Mycobacterium avium 104 4528803 YP_881539.1 CDS ftsW NC_008595.1 2340145 2341977 D identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; cell division protein FtsW 2340145..2341977 Mycobacterium avium 104 4527911 YP_881540.1 CDS murG NC_008595.1 2341974 2343200 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 2341974..2343200 Mycobacterium avium 104 4529804 YP_881541.1 CDS murC NC_008595.1 2343197 2344687 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 2343197..2344687 Mycobacterium avium 104 4527700 YP_881542.1 CDS MAV_2338 NC_008595.1 2344684 2345628 D identified by match to protein family HMM PF03799; cell division protein FtsQ-like protein 2344684..2345628 Mycobacterium avium 104 4528233 YP_881543.1 CDS MAV_2339 NC_008595.1 2345631 2345792 D FtsQ protein 2345631..2345792 Mycobacterium avium 104 4527754 YP_881544.1 CDS ftsZ NC_008595.1 2345899 2347059 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 2345899..2347059 Mycobacterium avium 104 4529332 YP_881545.1 CDS MAV_2341 NC_008595.1 2347112 2347819 D identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; hypothetical protein 2347112..2347819 Mycobacterium avium 104 4530026 YP_881546.1 CDS MAV_2342 NC_008595.1 2347825 2348610 D identified by match to protein family HMM TIGR00044; hypothetical protein 2347825..2348610 Mycobacterium avium 104 4530160 YP_881547.1 CDS MAV_2343 NC_008595.1 2348722 2349321 D identified by match to protein family HMM PF04472; hypothetical protein 2348722..2349321 Mycobacterium avium 104 4525827 YP_881548.1 CDS MAV_2344 NC_008595.1 2349434 2349781 D transmembrane protein 2349434..2349781 Mycobacterium avium 104 4527566 YP_881549.1 CDS MAV_2345 NC_008595.1 2350105 2350857 D identified by match to protein family HMM PF05103; Wag31 protein 2350105..2350857 Mycobacterium avium 104 4528898 YP_881550.1 CDS MAV_2346 NC_008595.1 2350973 2351368 D hypothetical protein 2350973..2351368 Mycobacterium avium 104 4526558 YP_881551.1 CDS MAV_2347 NC_008595.1 2351381 2352034 R identified by match to protein family HMM PF00156; phosphoribosyltransferase complement(2351381..2352034) Mycobacterium avium 104 4526945 YP_881552.1 CDS MAV_2348 NC_008595.1 2352100 2352327 R CalR2 protein complement(2352100..2352327) Mycobacterium avium 104 4527401 YP_881553.1 CDS MAV_2350 NC_008595.1 2352696 2354051 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; hypothetical protein 2352696..2354051 Mycobacterium avium 104 4526411 YP_881554.1 CDS MAV_2351 NC_008595.1 2354088 2354618 D identified by match to protein family HMM PF01161; match to protein family HMM TIGR00481; hypothetical protein 2354088..2354618 Mycobacterium avium 104 4529154 YP_881555.1 CDS MAV_2352 NC_008595.1 2354749 2356155 D identified by match to protein family HMM PF02720; hypothetical protein 2354749..2356155 Mycobacterium avium 104 4530114 YP_881556.1 CDS pyrD NC_008595.1 2356157 2357218 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(2356157..2357218) Mycobacterium avium 104 4530651 YP_881557.1 CDS MAV_2354 NC_008595.1 2357266 2357535 R hypothetical protein complement(2357266..2357535) Mycobacterium avium 104 4529253 YP_881558.1 CDS MAV_2355 NC_008595.1 2357532 2358551 R LppL protein complement(2357532..2358551) Mycobacterium avium 104 4529517 YP_881559.1 CDS MAV_2356 NC_008595.1 2358741 2359043 D hypothetical protein 2358741..2359043 Mycobacterium avium 104 4527900 YP_881560.1 CDS MAV_2357 NC_008595.1 2359090 2359884 D identified by match to protein family HMM PF00300; hypothetical protein 2359090..2359884 Mycobacterium avium 104 4529123 YP_881561.1 CDS MAV_2358 NC_008595.1 2359947 2360534 D hypothetical protein 2359947..2360534 Mycobacterium avium 104 4527957 YP_881562.1 CDS MAV_2359 NC_008595.1 2360518 2361363 D hypothetical protein 2360518..2361363 Mycobacterium avium 104 4526420 YP_881563.1 CDS MAV_2360 NC_008595.1 2361422 2362216 D identified by match to protein family HMM PF00459; inositol monophosphatase 2361422..2362216 Mycobacterium avium 104 4529561 YP_881564.1 CDS cysS NC_008595.1 2362692 2363846 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2362692..2363846 Mycobacterium avium 104 4530015 YP_881565.1 CDS MAV_2362 NC_008595.1 2364590 2367265 D identified by match to protein family HMM PF00196; TPR repeat-containing protein 2364590..2367265 Mycobacterium avium 104 4529532 YP_881566.1 CDS MAV_2363 NC_008595.1 2367695 2368969 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(2367695..2368969) Mycobacterium avium 104 4527635 YP_881567.1 CDS MAV_2364 NC_008595.1 2369082 2371673 D identified by match to protein family HMM PF00196; match to protein family HMM PF07721; TPR repeat-containing protein 2369082..2371673 Mycobacterium avium 104 4528934 YP_881568.1 CDS MAV_2365 NC_008595.1 2372157 2373884 D identified by match to protein family HMM PF02775; match to protein family HMM PF02776; acetolactate synthase 2372157..2373884 Mycobacterium avium 104 4528828 YP_881569.1 CDS MAV_2366 NC_008595.1 2374331 2374564 D identified by match to protein family HMM PF03621; hypothetical protein 2374331..2374564 Mycobacterium avium 104 4527659 YP_881570.1 CDS MAV_2368 NC_008595.1 2381720 2383207 D identified by match to protein family HMM PF07690; transporter, major facilitator family protein 2381720..2383207 Mycobacterium avium 104 4530307 YP_881571.1 CDS MAV_2369 NC_008595.1 2383291 2383470 D hypothetical protein 2383291..2383470 Mycobacterium avium 104 4525533 YP_881572.1 CDS MAV_2370 NC_008595.1 2383595 2389891 D identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; mycocerosic acid synthase 2383595..2389891 Mycobacterium avium 104 4530014 YP_881573.1 CDS MAV_2371 NC_008595.1 2389933 2391183 D identified by match to protein family HMM PF00067; cytochrome p450 2389933..2391183 Mycobacterium avium 104 4527925 YP_881574.1 CDS MAV_2372 NC_008595.1 2391223 2391558 D hypothetical protein 2391223..2391558 Mycobacterium avium 104 4530095 YP_881575.1 CDS MAV_2373 NC_008595.1 2391570 2392337 D identified by match to protein family HMM PF00970; match to protein family HMM PF04954; match to protein family HMM PF08021; siderophore-interacting protein 2391570..2392337 Mycobacterium avium 104 4528661 YP_881576.1 CDS MAV_2375 NC_008595.1 2394196 2394321 R hypothetical protein complement(2394196..2394321) Mycobacterium avium 104 4529042 YP_881577.1 CDS MAV_2376 NC_008595.1 2394818 2395717 D identified by match to protein family HMM PF00106; short chain dehydrogenase 2394818..2395717 Mycobacterium avium 104 4528133 YP_881578.1 CDS MAV_2377 NC_008595.1 2395777 2396814 D identified by match to protein family HMM PF00665; transposase 2395777..2396814 Mycobacterium avium 104 4525634 YP_881579.1 CDS MAV_2378 NC_008595.1 2396849 2397751 R identified by match to protein family HMM PF01908; hypothetical protein complement(2396849..2397751) Mycobacterium avium 104 4530266 YP_881580.1 CDS metH NC_008595.1 2398182 2401955 D one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 2398182..2401955 Mycobacterium avium 104 4525537 YP_881581.1 CDS MAV_2380 NC_008595.1 2401971 2403008 R identified by match to protein family HMM PF00665; transposase complement(2401971..2403008) Mycobacterium avium 104 4529508 YP_881582.1 CDS MAV_2381 NC_008595.1 2403068 2403835 R hypothetical protein complement(2403068..2403835) Mycobacterium avium 104 4527845 YP_881583.1 CDS MAV_2383 NC_008595.1 2404588 2405847 R identified by match to protein family HMM PF02470; mce related protein complement(2404588..2405847) Mycobacterium avium 104 4527356 YP_881584.1 CDS MAV_2384 NC_008595.1 2405844 2407061 R identified by match to protein family HMM PF02470; mce related protein complement(2405844..2407061) Mycobacterium avium 104 4527625 YP_881585.1 CDS MAV_2385 NC_008595.1 2407058 2408173 R identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce complement(2407058..2408173) Mycobacterium avium 104 4530248 YP_881586.1 CDS MAV_2386 NC_008595.1 2408170 2409210 R identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce complement(2408170..2409210) Mycobacterium avium 104 4528533 YP_881587.1 CDS MAV_2387 NC_008595.1 2409254 2410309 R identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce complement(2409254..2410309) Mycobacterium avium 104 4525998 YP_881588.1 CDS MAV_2388 NC_008595.1 2410306 2411898 R identified by match to protein family HMM PF02470; mce related protein complement(2410306..2411898) Mycobacterium avium 104 4530486 YP_881589.1 CDS MAV_2389 NC_008595.1 2411922 2412785 R identified by match to protein family HMM PF02405; ABC-transporter integral membrane protein complement(2411922..2412785) Mycobacterium avium 104 4526690 YP_881590.1 CDS MAV_2390 NC_008595.1 2412787 2413647 R identified by match to protein family HMM PF02405; hypothetical protein complement(2412787..2413647) Mycobacterium avium 104 4529086 YP_881591.1 CDS MAV_2391 NC_008595.1 2413951 2414583 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2413951..2414583 Mycobacterium avium 104 4527716 YP_881592.1 CDS hisE NC_008595.1 2414610 2414891 D catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 2414610..2414891 Mycobacterium avium 104 4528155 YP_881593.1 CDS hisG NC_008595.1 2414894 2415748 D long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 2414894..2415748 Mycobacterium avium 104 4528255 YP_881594.1 CDS MAV_2394 NC_008595.1 2415898 2416410 D hypothetical protein 2415898..2416410 Mycobacterium avium 104 4530394 YP_881595.1 CDS MAV_2396 NC_008595.1 2416435 2417805 D Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase 2416435..2417805 Mycobacterium avium 104 4528043 YP_881596.1 CDS MAV_2395 NC_008595.1 2417802 2418707 R RecB family protein exonuclease complement(2417802..2418707) Mycobacterium avium 104 4527359 YP_881597.1 CDS MAV_2397 NC_008595.1 2418783 2419628 D PimT protein 2418783..2419628 Mycobacterium avium 104 4526199 YP_881598.1 CDS MAV_2398 NC_008595.1 2419642 2419941 R identified by match to protein family HMM PF04456; hypothetical protein complement(2419642..2419941) Mycobacterium avium 104 4527271 YP_881599.1 CDS MAV_2399 NC_008595.1 2419950 2420540 R LppK protein complement(2419950..2420540) Mycobacterium avium 104 4526263 YP_881600.1 CDS MAV_2400 NC_008595.1 2420772 2422712 D identified by match to protein family HMM PF00004; ATPase AAA 2420772..2422712 Mycobacterium avium 104 4530329 YP_881601.1 CDS MAV_2401 NC_008595.1 2422826 2423470 R hypothetical protein complement(2422826..2423470) Mycobacterium avium 104 4528392 YP_881602.1 CDS MAV_2403 NC_008595.1 2425377 2425571 D identified by match to protein family HMM PF05639; hypothetical protein 2425377..2425571 Mycobacterium avium 104 4528021 YP_881603.1 CDS MAV_2404 NC_008595.1 2425568 2426479 D identified by match to protein family HMM PF00227; PcrB protein 2425568..2426479 Mycobacterium avium 104 4529747 YP_881604.1 CDS MAV_2405 NC_008595.1 2426476 2427246 D identified by match to protein family HMM PF00227; peptidase, T1 family protein 2426476..2427246 Mycobacterium avium 104 4526946 YP_881605.1 CDS MAV_2406 NC_008595.1 2427374 2428732 D identified by match to protein family HMM PF03136; match to protein family HMM PF03316; proteasome component 2427374..2428732 Mycobacterium avium 104 4526264 YP_881606.1 CDS MAV_2407 NC_008595.1 2428782 2429837 D hypothetical protein 2428782..2429837 Mycobacterium avium 104 4528544 YP_881607.1 CDS MAV_2408 NC_008595.1 2429834 2430802 D hypothetical protein 2429834..2430802 Mycobacterium avium 104 4529304 YP_881608.1 CDS tatA NC_008595.1 2430902 2431183 D TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 2430902..2431183 Mycobacterium avium 104 4526848 YP_881609.1 CDS tatC NC_008595.1 2431238 2432194 D identified by match to protein family HMM PF00902; match to protein family HMM TIGR00945; twin arginine-targeting protein translocase TatC 2431238..2432194 Mycobacterium avium 104 4530306 YP_881610.1 CDS MAV_2412 NC_008595.1 2435140 2435817 D hypothetical protein 2435140..2435817 Mycobacterium avium 104 4527497 YP_881611.1 CDS MAV_2413 NC_008595.1 2435822 2436763 R identified by match to protein family HMM PF01367; match to protein family HMM PF02739; 5'-3' exonuclease complement(2435822..2436763) Mycobacterium avium 104 4526074 YP_881612.1 CDS MAV_2414 NC_008595.1 2436896 2438023 D identified by match to protein family HMM PF00557; proline dipeptidase 2436896..2438023 Mycobacterium avium 104 4530805 YP_881613.1 CDS MAV_2415 NC_008595.1 2438129 2441119 D hypothetical protein 2438129..2441119 Mycobacterium avium 104 4530653 YP_881614.1 CDS MAV_2417 NC_008595.1 2441537 2441692 D hypothetical protein 2441537..2441692 Mycobacterium avium 104 4527351 YP_881615.1 CDS MAV_2420 NC_008595.1 2443902 2444240 D hypothetical protein 2443902..2444240 Mycobacterium avium 104 4530426 YP_881616.1 CDS MAV_2419 NC_008595.1 2444237 2444386 R nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(2444237..2444386) Mycobacterium avium 104 4529790 YP_881617.1 CDS MAV_2421 NC_008595.1 2444950 2445303 D hypothetical protein 2444950..2445303 Mycobacterium avium 104 4526173 YP_881618.1 CDS MAV_2422 NC_008595.1 2445329 2445739 R identified by match to protein family HMM PF01243; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(2445329..2445739) Mycobacterium avium 104 4528847 YP_881619.1 CDS MAV_2423 NC_008595.1 2445775 2446524 D identified by match to protein family HMM PF00106; short chain dehydrogenase 2445775..2446524 Mycobacterium avium 104 4528363 YP_881620.1 CDS cobL NC_008595.1 2446571 2447740 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR02467; match to protein family HMM TIGR02469; precorrin-6Y C5,15-methyltransferase (decarboxylating) 2446571..2447740 Mycobacterium avium 104 4528710 YP_881621.1 CDS cobM NC_008595.1 2447737 2448492 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR01465; precorrin-4 C11-methyltransferase 2447737..2448492 Mycobacterium avium 104 4526773 YP_881622.1 CDS cobK NC_008595.1 2448492 2449226 D CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 2448492..2449226 Mycobacterium avium 104 4528414 YP_881623.1 CDS MAV_2426 NC_008595.1 2449223 2450428 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate; RNA polymerase sigma factor SigC complement(2449223..2450428) Mycobacterium avium 104 4525901 YP_881624.1 CDS MAV_2428 NC_008595.1 2450464 2450712 R hypothetical protein complement(2450464..2450712) Mycobacterium avium 104 4528973 YP_881625.1 CDS MAV_2429 NC_008595.1 2450761 2452413 D identified by match to protein family HMM PF00823; PPE family protein 2450761..2452413 Mycobacterium avium 104 4527406 YP_881626.1 CDS MAV_2430 NC_008595.1 2452417 2453907 R identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466; match to protein family HMM TIGR01467; cobalamin biosynthesis protein cobIJ complement(2452417..2453907) Mycobacterium avium 104 4529686 YP_881627.1 CDS MAV_2431 NC_008595.1 2453904 2454425 R identified by match to protein family HMM PF02570; precorrin-8X methylmutase complement(2453904..2454425) Mycobacterium avium 104 4526696 YP_881628.1 CDS MAV_2433 NC_008595.1 2455727 2456554 D identified by match to protein family HMM PF00528; aliphatic sulfonates ABC transporter permease 2455727..2456554 Mycobacterium avium 104 4530245 YP_881629.1 CDS MAV_2434 NC_008595.1 2456572 2457327 D identified by match to protein family HMM PF00005; aliphatic sulfonates ABC transporter ATP-binding protein 2456572..2457327 Mycobacterium avium 104 4525961 YP_881630.1 CDS MAV_2435 NC_008595.1 2457324 2458334 D identified by match to protein family HMM TIGR01728; sulfonate binding protein 2457324..2458334 Mycobacterium avium 104 4530625 YP_881631.1 CDS MAV_2436 NC_008595.1 2458387 2459070 D hypothetical protein 2458387..2459070 Mycobacterium avium 104 4529283 YP_881632.1 CDS cobN NC_008595.1 2459063 2462638 D with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN 2459063..2462638 Mycobacterium avium 104 4526970 YP_881633.1 CDS MAV_2438 NC_008595.1 2462693 2463496 R identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase complement(2462693..2463496) Mycobacterium avium 104 4527121 YP_881634.1 CDS MAV_2439 NC_008595.1 2463500 2464108 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2463500..2464108) Mycobacterium avium 104 4528987 YP_881635.1 CDS MAV_2441 NC_008595.1 2465305 2466534 R hypothetical protein complement(2465305..2466534) Mycobacterium avium 104 4525682 YP_881636.1 CDS MAV_2442 NC_008595.1 2466761 2467141 D identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 2466761..2467141 Mycobacterium avium 104 4529846 YP_881637.1 CDS MAV_2443 NC_008595.1 2467165 2467776 R identified by match to protein family HMM PF01738; dienelactone hydrolase complement(2467165..2467776) Mycobacterium avium 104 4526384 YP_881638.1 CDS fxsA NC_008595.1 2467939 2468454 D F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA 2467939..2468454 Mycobacterium avium 104 4527064 YP_881639.1 CDS MAV_2445 NC_008595.1 2468496 2470112 D identified by match to protein family HMM PF07969; amidohydrolase 2468496..2470112 Mycobacterium avium 104 4528528 YP_881640.1 CDS MAV_2447 NC_008595.1 2472796 2473092 R hypothetical protein complement(2472796..2473092) Mycobacterium avium 104 4526181 YP_881641.1 CDS MAV_2448 NC_008595.1 2473365 2473652 D hypothetical protein 2473365..2473652 Mycobacterium avium 104 4529341 YP_881642.1 CDS MAV_2449 NC_008595.1 2473915 2474040 R hypothetical protein complement(2473915..2474040) Mycobacterium avium 104 4530085 YP_881643.1 CDS MAV_2450 NC_008595.1 2474065 2486580 D identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801; erythronolide synthase, modules 3 and 4 2474065..2486580 Mycobacterium avium 104 4530596 YP_881644.1 CDS MAV_2451 NC_008595.1 2486588 2489194 D identified by match to protein family HMM PF00391; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993; hypothetical protein 2486588..2489194 Mycobacterium avium 104 4527407 YP_881645.1 CDS MAV_2452 NC_008595.1 2489214 2489561 R hypothetical protein complement(2489214..2489561) Mycobacterium avium 104 4528325 YP_881646.1 CDS MAV_2454 NC_008595.1 2490357 2490485 R hypothetical protein complement(2490357..2490485) Mycobacterium avium 104 4525982 YP_881647.1 CDS MAV_2455 NC_008595.1 2490503 2491297 R identified by match to protein family HMM PF07728; CbbQ/NirQ/NorQ/GpvN family protein complement(2490503..2491297) Mycobacterium avium 104 4528537 YP_881648.1 CDS MAV_2456 NC_008595.1 2491320 2492858 R MorD protein complement(2491320..2492858) Mycobacterium avium 104 4525503 YP_881649.1 CDS MAV_2457 NC_008595.1 2492859 2492963 R hypothetical protein complement(2492859..2492963) Mycobacterium avium 104 4529255 YP_881650.1 CDS MAV_2458 NC_008595.1 2493010 2493717 R hypothetical protein complement(2493010..2493717) Mycobacterium avium 104 4530656 YP_881651.1 CDS MAV_2459 NC_008595.1 2493894 2494487 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2493894..2494487) Mycobacterium avium 104 4525730 YP_881652.1 CDS MAV_2460 NC_008595.1 2494706 2495494 D identified by match to protein family HMM PF00106; short chain dehydrogenase 2494706..2495494 Mycobacterium avium 104 4526625 YP_881653.1 CDS MAV_2461 NC_008595.1 2495519 2496601 D hypothetical protein 2495519..2496601 Mycobacterium avium 104 4529799 YP_881654.1 CDS MAV_2462 NC_008595.1 2496710 2497318 D hypothetical protein 2496710..2497318 Mycobacterium avium 104 4526340 YP_881655.1 CDS MAV_2463 NC_008595.1 2497326 2497955 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2497326..2497955) Mycobacterium avium 104 4528552 YP_881656.1 CDS MAV_2464 NC_008595.1 2498049 2499272 D identified by match to protein family HMM PF00067; cytochrome P450 family protein 2498049..2499272 Mycobacterium avium 104 4526337 YP_881657.1 CDS MAV_2465 NC_008595.1 2499370 2500035 R LppI protein complement(2499370..2500035) Mycobacterium avium 104 4529153 YP_881658.1 CDS MAV_2466 NC_008595.1 2500129 2501646 D identified by match to protein family HMM PF00135; LppT protein 2500129..2501646 Mycobacterium avium 104 4530452 YP_881659.1 CDS MAV_2467 NC_008595.1 2501665 2503662 D identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein 2501665..2503662 Mycobacterium avium 104 4529815 YP_881660.1 CDS aroK NC_008595.1 2503659 2504153 D identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313; shikimate kinase 2503659..2504153 Mycobacterium avium 104 4527639 YP_881661.1 CDS MAV_2469 NC_008595.1 2504201 2504623 D hypothetical protein 2504201..2504623 Mycobacterium avium 104 4525796 YP_881662.1 CDS MAV_2470 NC_008595.1 2504654 2505232 D hypothetical protein 2504654..2505232 Mycobacterium avium 104 4527726 YP_881663.1 CDS MAV_2471 NC_008595.1 2505237 2506268 R identified by match to protein family HMM PF07681; DoxX subfamily protein, putative complement(2505237..2506268) Mycobacterium avium 104 4529462 YP_881664.1 CDS MAV_2472 NC_008595.1 2506415 2506975 D identified by match to protein family HMM PF00857; isochorismatase 2506415..2506975 Mycobacterium avium 104 4528338 YP_881665.1 CDS MAV_2473 NC_008595.1 2506975 2507775 D identified by match to protein family HMM PF02136; steroid delta-isomerase 2506975..2507775 Mycobacterium avium 104 4529554 YP_881666.1 CDS MAV_2474 NC_008595.1 2507789 2508139 R integral membrane protein complement(2507789..2508139) Mycobacterium avium 104 4529945 YP_881667.1 CDS MAV_2475 NC_008595.1 2508308 2509240 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase sigma factor 2508308..2509240 Mycobacterium avium 104 4527643 YP_881668.1 CDS MAV_2476 NC_008595.1 2509306 2510634 D identified by match to protein family HMM PF01547; sugar ABC transporter substrate-binding protein 2509306..2510634 Mycobacterium avium 104 4527612 YP_881669.1 CDS MAV_2477 NC_008595.1 2510631 2511575 D identified by match to protein family HMM PF00528; sugar ABC transporter permease 2510631..2511575 Mycobacterium avium 104 4529599 YP_881670.1 CDS MAV_2478 NC_008595.1 2511562 2512404 D identified by match to protein family HMM PF00528; sugar ABC transporter permease 2511562..2512404 Mycobacterium avium 104 4525624 YP_881671.1 CDS MAV_2479 NC_008595.1 2512401 2513492 D identified by match to protein family HMM PF00005; glycerol-phosphate porter 2512401..2513492 Mycobacterium avium 104 4529871 YP_881672.1 CDS MAV_2480 NC_008595.1 2513498 2514454 D identified by match to protein family HMM PF01734; phospholipase, patatin family protein 2513498..2514454 Mycobacterium avium 104 4530481 YP_881673.1 CDS MAV_2481 NC_008595.1 2514480 2514767 R hypothetical protein complement(2514480..2514767) Mycobacterium avium 104 4530663 YP_881674.1 CDS MAV_2482 NC_008595.1 2515001 2515834 D hypothetical protein 2515001..2515834 Mycobacterium avium 104 4528499 YP_881675.1 CDS MAV_2483 NC_008595.1 2515916 2517526 D identified by match to protein family HMM PF03239; iron permease FTR1 family protein 2515916..2517526 Mycobacterium avium 104 4528329 YP_881676.1 CDS MAV_2484 NC_008595.1 2517564 2518739 D identified by match to protein family HMM PF04302; hypothetical protein 2517564..2518739 Mycobacterium avium 104 4526716 YP_881677.1 CDS MAV_2485 NC_008595.1 2518742 2520058 D identified by match to protein family HMM PF04261; match to protein family HMM TIGR01412; match to protein family HMM TIGR01413; Tat-translocated enzyme 2518742..2520058 Mycobacterium avium 104 4530540 YP_881678.1 CDS MAV_2486 NC_008595.1 2520222 2520746 D identified by match to protein family HMM PF02566; hypothetical protein 2520222..2520746 Mycobacterium avium 104 4526823 YP_881679.1 CDS MAV_2487 NC_008595.1 2520807 2521874 D NtrC protein 2520807..2521874 Mycobacterium avium 104 4530324 YP_881680.1 CDS MAV_2488 NC_008595.1 2521885 2522514 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase sigma factor, sigma-70 family protein 2521885..2522514 Mycobacterium avium 104 4528732 YP_881681.1 CDS MAV_2489 NC_008595.1 2522511 2522780 D hypothetical protein 2522511..2522780 Mycobacterium avium 104 4530058 YP_881682.1 CDS MAV_2490 NC_008595.1 2522777 2523721 D identified by match to protein family HMM PF01226; formate/nitrite transporter superfamily protein 2522777..2523721 Mycobacterium avium 104 4526059 YP_881683.1 CDS MAV_2491 NC_008595.1 2523789 2524097 D hypothetical protein 2523789..2524097 Mycobacterium avium 104 4530046 YP_881684.1 CDS MAV_2492 NC_008595.1 2524110 2525027 R identified by match to protein family HMM PF00665; transposase complement(2524110..2525027) Mycobacterium avium 104 4530089 YP_881685.1 CDS MAV_2493 NC_008595.1 2525027 2525302 R transposase complement(2525027..2525302) Mycobacterium avium 104 4526090 YP_881686.1 CDS MAV_2494 NC_008595.1 2525286 2526023 D identified by match to protein family HMM PF00582; universal stress protein family protein 2525286..2526023 Mycobacterium avium 104 4527345 YP_881687.1 CDS MAV_2495 NC_008595.1 2526058 2527311 R hypothetical protein complement(2526058..2527311) Mycobacterium avium 104 4526176 YP_881688.1 CDS MAV_2496 NC_008595.1 2527455 2528426 D identified by match to protein family HMM PF00248; aldo/keto reductase 2527455..2528426 Mycobacterium avium 104 4530467 YP_881689.1 CDS MAV_2497 NC_008595.1 2528436 2529536 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; RmlD substrate binding domain-containing protein complement(2528436..2529536) Mycobacterium avium 104 4526172 YP_881690.1 CDS MAV_2498 NC_008595.1 2529544 2530062 R hypothetical protein complement(2529544..2530062) Mycobacterium avium 104 4525840 YP_881691.1 CDS MAV_2499 NC_008595.1 2530125 2530931 R hypothetical protein complement(2530125..2530931) Mycobacterium avium 104 4528967 YP_881692.1 CDS MAV_2500 NC_008595.1 2531091 2532338 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase middle domain-containing protein 2531091..2532338 Mycobacterium avium 104 4528642 YP_881693.1 CDS MAV_2501 NC_008595.1 2532335 2533201 D hypothetical protein 2532335..2533201 Mycobacterium avium 104 4526511 YP_881694.1 CDS MAV_2502 NC_008595.1 2533353 2534351 D hypothetical protein 2533353..2534351 Mycobacterium avium 104 4526834 YP_881695.1 CDS MAV_2503 NC_008595.1 2534438 2534815 D hypothetical protein 2534438..2534815 Mycobacterium avium 104 4529698 YP_881696.1 CDS MAV_2504 NC_008595.1 2534994 2535422 R hypothetical protein complement(2534994..2535422) Mycobacterium avium 104 4527235 YP_881697.1 CDS MAV_2505 NC_008595.1 2535704 2536705 D hypothetical protein 2535704..2536705 Mycobacterium avium 104 4529626 YP_881698.1 CDS MAV_2506 NC_008595.1 2536772 2537653 D identified by match to protein family HMM PF00582; universal stress protein family protein 2536772..2537653 Mycobacterium avium 104 4528407 YP_881699.1 CDS MAV_2507 NC_008595.1 2537812 2538696 D identified by match to protein family HMM PF00582; universal stress protein family protein 2537812..2538696 Mycobacterium avium 104 4530489 YP_881700.1 CDS MAV_2508 NC_008595.1 2538852 2540264 D identified by match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; PAS domain-containing protein 2538852..2540264 Mycobacterium avium 104 4526749 YP_881701.1 CDS MAV_2509 NC_008595.1 2540371 2541153 D identified by match to protein family HMM PF00106; 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase 2540371..2541153 Mycobacterium avium 104 4530176 YP_881702.1 CDS MAV_2510 NC_008595.1 2541228 2544128 R identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; MmpL4 protein complement(2541228..2544128) Mycobacterium avium 104 4528978 YP_881703.1 CDS MAV_2511 NC_008595.1 2544125 2544559 R identified by match to protein family HMM PF05423; MmpS5 protein complement(2544125..2544559) Mycobacterium avium 104 4526676 YP_881704.1 CDS MAV_2512 NC_008595.1 2544858 2545466 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2544858..2545466) Mycobacterium avium 104 4529264 YP_881705.1 CDS MAV_2513 NC_008595.1 2545668 2546594 R identified by match to protein family HMM PF07859; alpha/beta hydrolase complement(2545668..2546594) Mycobacterium avium 104 4527427 YP_881706.1 CDS MAV_2514 NC_008595.1 2546696 2548282 R identified by match to protein family HMM PF00823; PPE family protein complement(2546696..2548282) Mycobacterium avium 104 4527627 YP_881707.1 CDS MAV_2515 NC_008595.1 2548507 2549538 R identified by match to protein family HMM PF04909; amidohydrolase complement(2548507..2549538) Mycobacterium avium 104 4526789 YP_881708.1 CDS MAV_2516 NC_008595.1 2549555 2550553 R identified by match to protein family HMM PF00903; extradiol ring cleaving catechol dioxygenase complement(2549555..2550553) Mycobacterium avium 104 4528892 YP_881709.1 CDS MAV_2517 NC_008595.1 2550550 2551422 R identified by match to protein family HMM PF00561; 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase complement(2550550..2551422) Mycobacterium avium 104 4529466 YP_881710.1 CDS MAV_2518 NC_008595.1 2551419 2552483 R identified by match to protein family HMM PF01494; monooxygenase, FAD-binding complement(2551419..2552483) Mycobacterium avium 104 4529437 YP_881711.1 CDS MAV_2519 NC_008595.1 2552571 2553845 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(2552571..2553845) Mycobacterium avium 104 4526248 YP_881712.1 CDS MAV_2520 NC_008595.1 2553898 2554338 R hypothetical protein complement(2553898..2554338) Mycobacterium avium 104 4530069 YP_881713.1 CDS mmsA NC_008595.1 2554591 2556120 D identified by match to protein family HMM PF00171; match to protein family HMM TIGR01722; methylmalonate-semialdehyde dehydrogenase 2554591..2556120 Mycobacterium avium 104 4525927 YP_881714.1 CDS MAV_2522 NC_008595.1 2556196 2556360 D hypothetical protein 2556196..2556360 Mycobacterium avium 104 4527228 YP_881715.1 CDS MAV_2523 NC_008595.1 2556899 2557516 D hypothetical protein 2556899..2557516 Mycobacterium avium 104 4528919 YP_881716.1 CDS MAV_2524 NC_008595.1 2557598 2557879 R hypothetical protein complement(2557598..2557879) Mycobacterium avium 104 4527695 YP_881717.1 CDS MAV_2525 NC_008595.1 2558048 2558182 R hypothetical protein complement(2558048..2558182) Mycobacterium avium 104 4526201 YP_881718.1 CDS MAV_2526 NC_008595.1 2558458 2559762 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 2558458..2559762 Mycobacterium avium 104 4530238 YP_881719.1 CDS MAV_2527 NC_008595.1 2559817 2560323 R identified by match to protein family HMM PF00440; repressor protein complement(2559817..2560323) Mycobacterium avium 104 4529460 YP_881720.1 CDS MAV_2528 NC_008595.1 2560853 2562433 D identified by match to protein family HMM PF00665; transposase 2560853..2562433 Mycobacterium avium 104 4527522 YP_881721.1 CDS MAV_2529 NC_008595.1 2562430 2563224 D identified by match to protein family HMM PF01695; helper protein 2562430..2563224 Mycobacterium avium 104 4529705 YP_881722.1 CDS MAV_2530 NC_008595.1 2564369 2565154 D identified by match to protein family HMM PF02405; TrnB1 protein 2564369..2565154 Mycobacterium avium 104 4529788 YP_881723.1 CDS MAV_2531 NC_008595.1 2565151 2566035 D identified by match to protein family HMM PF02405; TrnB2 protein 2565151..2566035 Mycobacterium avium 104 4530029 YP_881724.1 CDS MAV_2532 NC_008595.1 2566171 2567511 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 2566171..2567511 Mycobacterium avium 104 4527236 YP_881725.1 CDS MAV_2533 NC_008595.1 2567550 2568578 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 2567550..2568578 Mycobacterium avium 104 4530409 YP_881726.1 CDS MAV_2534 NC_008595.1 2568575 2569900 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 2568575..2569900 Mycobacterium avium 104 4528105 YP_881727.1 CDS MAV_2535 NC_008595.1 2569924 2571243 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 2569924..2571243 Mycobacterium avium 104 4526618 YP_881728.1 CDS MAV_2536 NC_008595.1 2571240 2572400 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 2571240..2572400 Mycobacterium avium 104 4527717 YP_881729.1 CDS MAV_2537 NC_008595.1 2572402 2573877 D identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce 2572402..2573877 Mycobacterium avium 104 4528557 YP_881730.1 CDS MAV_2538 NC_008595.1 2573994 2574572 D hypothetical protein 2573994..2574572 Mycobacterium avium 104 4529797 YP_881731.1 CDS MAV_2539 NC_008595.1 2574737 2575336 D hypothetical protein 2574737..2575336 Mycobacterium avium 104 4525763 YP_881732.1 CDS MAV_2540 NC_008595.1 2575607 2576461 D identified by match to protein family HMM PF02551; acyl-CoA thioesterase 2575607..2576461 Mycobacterium avium 104 4526724 YP_881733.1 CDS MAV_2541 NC_008595.1 2576492 2577694 R identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F complement(2576492..2577694) Mycobacterium avium 104 4528345 YP_881734.1 CDS MAV_2542 NC_008595.1 2577759 2578541 R identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator complement(2577759..2578541) Mycobacterium avium 104 4527398 YP_881735.1 CDS MAV_2543 NC_008595.1 2578617 2579612 R 5,10-methylenetetrahydromethanopterin reductase complement(2578617..2579612) Mycobacterium avium 104 4529826 YP_881736.1 CDS MAV_2544 NC_008595.1 2579790 2580803 D identified by match to protein family HMM PF00355; iron-sulfur cluster-binding protein, Rieske family protein 2579790..2580803 Mycobacterium avium 104 4528184 YP_881737.1 CDS MAV_2546 NC_008595.1 2580793 2581404 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2580793..2581404 Mycobacterium avium 104 4526404 YP_881738.1 CDS MAV_2545 NC_008595.1 2581388 2581633 R hypothetical protein complement(2581388..2581633) Mycobacterium avium 104 4527782 YP_881739.1 CDS MAV_2547 NC_008595.1 2582115 2583641 D activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 2582115..2583641 Mycobacterium avium 104 4526360 YP_881740.1 CDS MAV_2548 NC_008595.1 2583646 2584803 R identified by match to protein family HMM PF00067; cytochrome P450 143 complement(2583646..2584803) Mycobacterium avium 104 4526878 YP_881741.1 CDS MAV_2549 NC_008595.1 2584819 2585616 R identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase SDR complement(2584819..2585616) Mycobacterium avium 104 4526123 YP_881742.1 CDS MAV_2550 NC_008595.1 2585629 2586459 R identified by match to protein family HMM PF00106; carveol dehydrogenase complement(2585629..2586459) Mycobacterium avium 104 4527315 YP_881743.1 CDS MAV_2551 NC_008595.1 2586623 2587450 D identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 2586623..2587450 Mycobacterium avium 104 4527333 YP_881744.1 CDS MAV_2552 NC_008595.1 2587497 2588276 R identified by match to protein family HMM PF00106; 3-hydroxyacyl-CoA dehydrogenase type-2 complement(2587497..2588276) Mycobacterium avium 104 4525593 YP_881745.1 CDS MAV_2553 NC_008595.1 2588273 2589382 R identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(2588273..2589382) Mycobacterium avium 104 4530138 YP_881746.1 CDS MAV_2554 NC_008595.1 2589379 2590530 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase, central region complement(2589379..2590530) Mycobacterium avium 104 4530807 YP_881747.1 CDS MAV_2555 NC_008595.1 2590540 2591367 R identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase SDR complement(2590540..2591367) Mycobacterium avium 104 4525942 YP_881748.1 CDS MAV_2556 NC_008595.1 2591506 2592726 D hypothetical protein 2591506..2592726 Mycobacterium avium 104 4530229 YP_881749.1 CDS MAV_2557 NC_008595.1 2592723 2593883 D identified by match to protein family HMM PF02803; thiolase 2592723..2593883 Mycobacterium avium 104 4529744 YP_881750.1 CDS MAV_2558 NC_008595.1 2593896 2594705 D identified by match to protein family HMM PF00378; enoyl-CoA hydratase 2593896..2594705 Mycobacterium avium 104 4526099 YP_881751.1 CDS MAV_2559 NC_008595.1 2594731 2595555 R identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; hypothetical protein complement(2594731..2595555) Mycobacterium avium 104 4528084 YP_881752.1 CDS MAV_2560 NC_008595.1 2595552 2596292 R identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator complement(2595552..2596292) Mycobacterium avium 104 4529589 YP_881753.1 CDS MAV_2561 NC_008595.1 2596402 2597544 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; long-chain specific acyl-CoA dehydrogenase complement(2596402..2597544) Mycobacterium avium 104 4528475 YP_881754.1 CDS MAV_2562 NC_008595.1 2597555 2598574 R identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(2597555..2598574) Mycobacterium avium 104 4529489 YP_881755.1 CDS MAV_2563 NC_008595.1 2598571 2599776 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase complement(2598571..2599776) Mycobacterium avium 104 4527036 YP_881756.1 CDS MAV_2564 NC_008595.1 2599892 2601385 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase (NAD) family protein 2599892..2601385 Mycobacterium avium 104 4526467 YP_881757.1 CDS MAV_2565 NC_008595.1 2601382 2602593 D identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F 2601382..2602593 Mycobacterium avium 104 4528261 YP_881758.1 CDS MAV_2566 NC_008595.1 2602593 2603552 D identified by match to protein family HMM PF00903; glyoxalase 2602593..2603552 Mycobacterium avium 104 4525857 YP_881759.1 CDS MAV_2567 NC_008595.1 2603568 2604344 D identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase SDR 2603568..2604344 Mycobacterium avium 104 4527711 YP_881760.1 CDS MAV_2569 NC_008595.1 2605283 2606473 R acetyl-CoA hydrolase/transferase, putative complement(2605283..2606473) Mycobacterium avium 104 4529927 YP_881761.1 CDS MAV_2570 NC_008595.1 2606482 2608800 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(2606482..2608800) Mycobacterium avium 104 4529144 YP_881762.1 CDS MAV_2571 NC_008595.1 2608797 2610287 R identified by match to protein family HMM PF00501; cyclohex-1-ene-1-carboxylate:CoA ligase complement(2608797..2610287) Mycobacterium avium 104 4525852 YP_881763.1 CDS MAV_2572 NC_008595.1 2610313 2611533 R identified by match to protein family HMM PF00067; cytochrome P450 142 complement(2610313..2611533) Mycobacterium avium 104 4528062 YP_881764.1 CDS MAV_2573 NC_008595.1 2611560 2612714 R lipid-transfer protein complement(2611560..2612714) Mycobacterium avium 104 4529022 YP_881765.1 CDS MAV_2574 NC_008595.1 2612900 2614387 D identified by match to protein family HMM PF00501; feruloyl-CoA synthetase 2612900..2614387 Mycobacterium avium 104 4530316 YP_881766.1 CDS MAV_2575 NC_008595.1 2614469 2614723 D hypothetical protein 2614469..2614723 Mycobacterium avium 104 4525892 YP_881767.1 CDS MAV_2576 NC_008595.1 2614791 2615732 R identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase complement(2614791..2615732) Mycobacterium avium 104 4529724 YP_881768.1 CDS MAV_2577 NC_008595.1 2615831 2617060 R identified by match to protein family HMM PF04909; amidohydrolase complement(2615831..2617060) Mycobacterium avium 104 4530184 YP_881769.1 CDS MAV_2578 NC_008595.1 2617208 2617828 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2617208..2617828 Mycobacterium avium 104 4527098 YP_881770.1 CDS MAV_2579 NC_008595.1 2617825 2618265 D identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 2617825..2618265 Mycobacterium avium 104 4527888 YP_881771.1 CDS MAV_2580 NC_008595.1 2618291 2618617 D hypothetical protein 2618291..2618617 Mycobacterium avium 104 4530508 YP_881772.1 CDS MAV_2581 NC_008595.1 2618654 2618800 D hypothetical protein 2618654..2618800 Mycobacterium avium 104 4526616 YP_881773.1 CDS MAV_2582 NC_008595.1 2618806 2619828 R hypothetical protein complement(2618806..2619828) Mycobacterium avium 104 4527388 YP_881774.1 CDS MAV_2583 NC_008595.1 2619839 2620273 R hypothetical protein complement(2619839..2620273) Mycobacterium avium 104 4529363 YP_881775.1 CDS MAV_2584 NC_008595.1 2620275 2621462 R identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; beta-ketoadipyl CoA thiolase complement(2620275..2621462) Mycobacterium avium 104 4527628 YP_881776.1 CDS MAV_2585 NC_008595.1 2621591 2622031 D identified by match to protein family HMM PF01575; MaoC domain-containing protein 2621591..2622031 Mycobacterium avium 104 4525704 YP_881777.1 CDS MAV_2586 NC_008595.1 2622028 2623221 D DitF protein 2622028..2623221 Mycobacterium avium 104 4530725 YP_881778.1 CDS MAV_2587 NC_008595.1 2623225 2624787 D identified by match to protein family HMM PF00501; AMP-dependent synthetase and ligase 2623225..2624787 Mycobacterium avium 104 4530346 YP_881779.1 CDS MAV_2588 NC_008595.1 2624798 2626096 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2624798..2626096) Mycobacterium avium 104 4525619 YP_881780.1 CDS MAV_2589 NC_008595.1 2626126 2626440 R hypothetical protein complement(2626126..2626440) Mycobacterium avium 104 4526975 YP_881781.1 CDS MAV_2591 NC_008595.1 2626625 2627761 D identified by match to protein family HMM PF04909; amidohydrolase 2626625..2627761 Mycobacterium avium 104 4529700 YP_881782.1 CDS MAV_2590 NC_008595.1 2627758 2628912 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(2627758..2628912) Mycobacterium avium 104 4527898 YP_881783.1 CDS MAV_2592 NC_008595.1 2629133 2629327 D hypothetical protein 2629133..2629327 Mycobacterium avium 104 4529684 YP_881784.1 CDS MAV_2593 NC_008595.1 2629404 2631698 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 2629404..2631698 Mycobacterium avium 104 4526147 YP_881785.1 CDS MAV_2594 NC_008595.1 2631743 2632933 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; acyl-CoA dehydrogenase 2631743..2632933 Mycobacterium avium 104 4526251 YP_881786.1 CDS MAV_2595 NC_008595.1 2632937 2633944 R identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(2632937..2633944) Mycobacterium avium 104 4529660 YP_881787.1 CDS MAV_2596 NC_008595.1 2634038 2635555 D identified by match to protein family HMM PF00501; AMP-dependent synthetase and ligase 2634038..2635555 Mycobacterium avium 104 4528295 YP_881788.1 CDS MAV_2597 NC_008595.1 2635593 2636402 D identified by match to protein family HMM PF00378; carnitinyl-CoA dehydratase 2635593..2636402 Mycobacterium avium 104 4529572 YP_881789.1 CDS MAV_2598 NC_008595.1 2636404 2637255 D identified by match to protein family HMM PF00106; carveol dehydrogenase 2636404..2637255 Mycobacterium avium 104 4529763 YP_881790.1 CDS MAV_2599 NC_008595.1 2637264 2638589 D hypothetical protein 2637264..2638589 Mycobacterium avium 104 4529018 YP_881791.1 CDS MAV_2600 NC_008595.1 2638599 2639741 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 2638599..2639741 Mycobacterium avium 104 4525803 YP_881792.1 CDS MAV_2601 NC_008595.1 2639752 2640507 D identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 2639752..2640507 Mycobacterium avium 104 4528463 YP_881793.1 CDS MAV_2602 NC_008595.1 2640554 2641351 D identified by match to protein family HMM PF00561; hydrolase 2640554..2641351 Mycobacterium avium 104 4530309 YP_881794.1 CDS MAV_2603 NC_008595.1 2641513 2642322 R hypothetical protein complement(2641513..2642322) Mycobacterium avium 104 4528509 YP_881795.1 CDS MAV_2604 NC_008595.1 2642360 2643109 R identified by match to protein family HMM PF00561; alpha/beta hydrolase complement(2642360..2643109) Mycobacterium avium 104 4525986 YP_881796.1 CDS MAV_2605 NC_008595.1 2643121 2644053 R identified by match to protein family HMM PF00296; hypothetical protein complement(2643121..2644053) Mycobacterium avium 104 4527208 YP_881797.1 CDS MAV_2606 NC_008595.1 2644065 2645183 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(2644065..2645183) Mycobacterium avium 104 4525539 YP_881798.1 CDS MAV_2607 NC_008595.1 2645228 2645818 R identified by match to protein family HMM PF01613; flavin reductase-like domain-containing protein complement(2645228..2645818) Mycobacterium avium 104 4525751 YP_881799.1 CDS MAV_2608 NC_008595.1 2645838 2647328 R identified by match to protein family HMM PF00171; aldehyde dehydrogenase complement(2645838..2647328) Mycobacterium avium 104 4526589 YP_881800.1 CDS MAV_2609 NC_008595.1 2647339 2648121 R identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase complement(2647339..2648121) Mycobacterium avium 104 4525956 YP_881801.1 CDS MAV_2610 NC_008595.1 2648118 2649725 R identified by match to protein family HMM PF00501; acyl-CoA synthase complement(2648118..2649725) Mycobacterium avium 104 4526309 YP_881802.1 CDS MAV_2611 NC_008595.1 2649740 2650255 R identified by match to protein family HMM PF00866; dioxygenase small subunit complement(2649740..2650255) Mycobacterium avium 104 4525826 YP_881803.1 CDS MAV_2612 NC_008595.1 2650252 2651547 R identified by match to protein family HMM PF00355; match to protein family HMM PF00848; dioxygenase large subunit complement(2650252..2651547) Mycobacterium avium 104 4530251 YP_881804.1 CDS MAV_2613 NC_008595.1 2651544 2651984 R hypothetical protein complement(2651544..2651984) Mycobacterium avium 104 4526859 YP_881805.1 CDS MAV_2614 NC_008595.1 2651981 2653132 R thiolase complement(2651981..2653132) Mycobacterium avium 104 4526006 YP_881806.1 CDS MAV_2615 NC_008595.1 2653129 2653374 R hypothetical protein complement(2653129..2653374) Mycobacterium avium 104 4529662 YP_881807.1 CDS MAV_2616 NC_008595.1 2653569 2654495 D identified by match to protein family HMM PF00561; 2-hydroxy-6-ketonona-2,4-dienedoic acid hydrolase 2653569..2654495 Mycobacterium avium 104 4526646 YP_881808.1 CDS hpaH NC_008595.1 2654492 2655313 D identified by match to protein family HMM PF01689; match to protein family HMM TIGR02312; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 2654492..2655313 Mycobacterium avium 104 4528189 YP_881809.1 CDS MAV_2618 NC_008595.1 2655310 2656074 D identified by match to protein family HMM PF03328; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 2655310..2656074 Mycobacterium avium 104 4527785 YP_881810.1 CDS MAV_2619 NC_008595.1 2656120 2657292 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase domain-containing protein 2656120..2657292 Mycobacterium avium 104 4526936 YP_881811.1 CDS MAV_2620 NC_008595.1 2657305 2658327 D identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase 2657305..2658327 Mycobacterium avium 104 4526393 YP_881812.1 CDS MAV_2621 NC_008595.1 2658324 2659484 D thiolase 2658324..2659484 Mycobacterium avium 104 4526872 YP_881813.1 CDS MAV_2622 NC_008595.1 2659485 2660984 D identified by match to protein family HMM PF00501; acyl-CoA synthase 2659485..2660984 Mycobacterium avium 104 4526126 YP_881814.1 CDS MAV_2623 NC_008595.1 2661019 2661813 D identified by match to protein family HMM PF00106; carveol dehydrogenase 2661019..2661813 Mycobacterium avium 104 4527909 YP_881815.1 CDS MAV_2624 NC_008595.1 2661823 2662359 R identified by match to protein family HMM PF03061; thioesterase complement(2661823..2662359) Mycobacterium avium 104 4530420 YP_881816.1 CDS MAV_2625 NC_008595.1 2662524 2664944 D identified by match to protein family HMM PF02515; caib/baif family protein 2662524..2664944 Mycobacterium avium 104 4526672 YP_881817.1 CDS MAV_2626 NC_008595.1 2664949 2665632 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2664949..2665632) Mycobacterium avium 104 4526969 YP_881818.1 CDS MAV_2628 NC_008595.1 2665775 2666005 D hypothetical protein 2665775..2666005 Mycobacterium avium 104 4527719 YP_881819.1 CDS MAV_2627 NC_008595.1 2665995 2667269 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(2665995..2667269) Mycobacterium avium 104 4529608 YP_881820.1 CDS MAV_2629 NC_008595.1 2667375 2668328 D identified by match to protein family HMM PF04909; amidohydrolase 2667375..2668328 Mycobacterium avium 104 4526002 YP_881821.1 CDS MAV_2630 NC_008595.1 2668369 2669532 D thiolase 2668369..2669532 Mycobacterium avium 104 4527014 YP_881822.1 CDS MAV_2631 NC_008595.1 2669529 2669984 D identified by match to protein family HMM PF01796; hypothetical protein 2669529..2669984 Mycobacterium avium 104 4530573 YP_881823.1 CDS MAV_2632 NC_008595.1 2670479 2671048 R identified by match to protein family HMM PF00440; transcription regulator complement(2670479..2671048) Mycobacterium avium 104 4528966 YP_881824.1 CDS MAV_2633 NC_008595.1 2671324 2672403 D hypothetical protein 2671324..2672403 Mycobacterium avium 104 4527464 YP_881825.1 CDS MAV_2634 NC_008595.1 2672701 2673873 D identified by match to protein family HMM PF00067; cytochrome p450 2672701..2673873 Mycobacterium avium 104 4527609 YP_881826.1 CDS MAV_2635 NC_008595.1 2673899 2674738 D identified by match to protein family HMM PF03446; 3-hydroxyisobutyrate dehydrogenase 2673899..2674738 Mycobacterium avium 104 4528482 YP_881827.1 CDS MAV_2636 NC_008595.1 2674807 2675556 D identified by match to protein family HMM PF00106; carveol dehydrogenase 2674807..2675556 Mycobacterium avium 104 4529676 YP_881828.1 CDS MAV_2638 NC_008595.1 2675573 2677174 D identified by match to protein family HMM PF00501; AMP-dependent synthetase and ligase 2675573..2677174 Mycobacterium avium 104 4525764 YP_881829.1 CDS MAV_2637 NC_008595.1 2677171 2677707 R hypothetical protein complement(2677171..2677707) Mycobacterium avium 104 4526630 YP_881830.1 CDS MAV_2639 NC_008595.1 2677758 2678681 R identified by match to protein family HMM PF00106; short chain dehydrogenase complement(2677758..2678681) Mycobacterium avium 104 4526810 YP_881831.1 CDS MAV_2640 NC_008595.1 2678678 2679112 R identified by match to protein family HMM PF01796; hypothetical protein complement(2678678..2679112) Mycobacterium avium 104 4530231 YP_881832.1 CDS MAV_2641 NC_008595.1 2679106 2679909 R identified by match to protein family HMM PF00378; enoyl CoA hydratase complement(2679106..2679909) Mycobacterium avium 104 4528301 YP_881833.1 CDS MAV_2642 NC_008595.1 2679906 2681180 R identified by match to protein family HMM PF00067; cytochrome P450 complement(2679906..2681180) Mycobacterium avium 104 4526833 YP_881834.1 CDS MAV_2643 NC_008595.1 2681324 2682406 D identified by match to protein family HMM PF01408; match to protein family HMM PF02894; oxidoreductase, NAD-binding Rossmann fold protein 2681324..2682406 Mycobacterium avium 104 4527131 YP_881835.1 CDS MAV_2644 NC_008595.1 2682591 2683094 D hypothetical protein 2682591..2683094 Mycobacterium avium 104 4527661 YP_881836.1 CDS MAV_2645 NC_008595.1 2683125 2683847 R carveol dehydrogenase complement(2683125..2683847) Mycobacterium avium 104 4527795 YP_881837.1 CDS MAV_2646 NC_008595.1 2684122 2685255 R identified by match to protein family HMM PF00107; alcohol dehydrogenase B complement(2684122..2685255) Mycobacterium avium 104 4530068 YP_881838.1 CDS MAV_2647 NC_008595.1 2685272 2686735 R identified by match to protein family HMM PF00171; betaine-aldehyde dehydrogenase complement(2685272..2686735) Mycobacterium avium 104 4526952 YP_881839.1 CDS MAV_2648 NC_008595.1 2686814 2687248 D hypothetical protein 2686814..2687248 Mycobacterium avium 104 4528142 YP_881840.1 CDS MAV_2649 NC_008595.1 2687245 2687730 D identified by match to protein family HMM PF01575; MaoC like domain-containing protein 2687245..2687730 Mycobacterium avium 104 4526799 YP_881841.1 CDS MAV_2650 NC_008595.1 2687743 2689083 D identified by match to protein family HMM PF00440; transcriptional regulator 2687743..2689083 Mycobacterium avium 104 4529972 YP_881842.1 CDS MAV_2651 NC_008595.1 2689097 2690254 R identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F complement(2689097..2690254) Mycobacterium avium 104 4529407 YP_881843.1 CDS MAV_2653 NC_008595.1 2690599 2691579 D identified by match to protein family HMM PF02515; fatty acid-CoA racemase 2690599..2691579 Mycobacterium avium 104 4526071 YP_881844.1 CDS mhpB NC_008595.1 2691571 2692293 R catalyzes the cleavage of 3-(2,3-dihydroxyphenyl) propionate into 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate; part of the 3-phenylpropionic acid degradation pathway; member of the protocatechuate 4,5-dioxygenase family; 3-(2,3-dihydroxyphenyl)propionate dioxygenase complement(2691571..2692293) Mycobacterium avium 104 4526890 YP_881845.1 CDS MAV_2654 NC_008595.1 2692489 2692659 R hypothetical protein complement(2692489..2692659) Mycobacterium avium 104 4526732 YP_881846.1 CDS MAV_2655 NC_008595.1 2692673 2693515 R hypothetical protein complement(2692673..2693515) Mycobacterium avium 104 4529831 YP_881847.1 CDS MAV_2656 NC_008595.1 2693820 2694860 D hypothetical protein 2693820..2694860 Mycobacterium avium 104 4529644 YP_881848.1 CDS MAV_2657 NC_008595.1 2694867 2695457 R identified by match to protein family HMM PF00440; transcriptional regulator complement(2694867..2695457) Mycobacterium avium 104 4526302 YP_881849.1 CDS MAV_2658 NC_008595.1 2695625 2696815 D identified by match to protein family HMM PF00067; cytochrome P450 2695625..2696815 Mycobacterium avium 104 4526061 YP_881850.1 CDS MAV_2659 NC_008595.1 2696839 2697759 R identified by match to protein family HMM PF00296; hypothetical protein complement(2696839..2697759) Mycobacterium avium 104 4529838 YP_881851.1 CDS MAV_2660 NC_008595.1 2698001 2698366 D hypothetical protein 2698001..2698366 Mycobacterium avium 104 4527948 YP_881852.1 CDS MAV_2661 NC_008595.1 2698366 2698974 D identified by match to protein family HMM PF00881; nitroreductase 2698366..2698974 Mycobacterium avium 104 4525686 YP_881853.1 CDS MAV_2662 NC_008595.1 2698994 2701144 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 2698994..2701144 Mycobacterium avium 104 4527789 YP_881854.1 CDS MAV_2663 NC_008595.1 2701158 2702294 D lipid-transfer protein 2701158..2702294 Mycobacterium avium 104 4529109 YP_881855.1 CDS MAV_2664 NC_008595.1 2702378 2702701 D hypothetical protein 2702378..2702701 Mycobacterium avium 104 4530190 YP_881856.1 CDS MAV_2665 NC_008595.1 2702718 2703539 D identified by match to protein family HMM PF00106; 3-oxoacyl-[acyl-carrier-protein] reductase 2702718..2703539 Mycobacterium avium 104 4529237 YP_881857.1 CDS MAV_2666 NC_008595.1 2703559 2704677 R hypothetical protein complement(2703559..2704677) Mycobacterium avium 104 4528002 YP_881858.1 CDS MAV_2667 NC_008595.1 2704781 2705011 R hypothetical protein complement(2704781..2705011) Mycobacterium avium 104 4527184 YP_881859.1 CDS MAV_2668 NC_008595.1 2705224 2706366 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(2705224..2706366) Mycobacterium avium 104 4528296 YP_881860.1 CDS MAV_2669 NC_008595.1 2706363 2706566 R short chain dehydrogenase complement(2706363..2706566) Mycobacterium avium 104 4529218 YP_881861.1 CDS MAV_2671 NC_008595.1 2706695 2707999 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 2706695..2707999 Mycobacterium avium 104 4528164 YP_881862.1 CDS MAV_2670 NC_008595.1 2707976 2708665 R identified by match to protein family HMM PF00106; retinol dehydrogenase 12 complement(2707976..2708665) Mycobacterium avium 104 4527985 YP_881863.1 CDS MAV_2672 NC_008595.1 2708730 2710229 D identified by match to protein family HMM PF00501; acyl-CoA synthase 2708730..2710229 Mycobacterium avium 104 4525912 YP_881864.1 CDS MAV_2673 NC_008595.1 2710557 2710922 D hypothetical protein 2710557..2710922 Mycobacterium avium 104 4530434 YP_881865.1 CDS MAV_2674 NC_008595.1 2711300 2711560 R hypothetical protein complement(2711300..2711560) Mycobacterium avium 104 4527161 YP_881866.1 CDS MAV_2675 NC_008595.1 2711640 2713220 D identified by match to protein family HMM PF00665; transposase 2711640..2713220 Mycobacterium avium 104 4530501 YP_881867.1 CDS MAV_2676 NC_008595.1 2713217 2714011 D identified by match to protein family HMM PF01695; helper protein 2713217..2714011 Mycobacterium avium 104 4529854 YP_881868.1 CDS MAV_2677 NC_008595.1 2714063 2714185 R hypothetical protein complement(2714063..2714185) Mycobacterium avium 104 4530173 YP_881869.1 CDS MAV_2678 NC_008595.1 2714356 2714631 D transposase 2714356..2714631 Mycobacterium avium 104 4527101 YP_881870.1 CDS MAV_2679 NC_008595.1 2714631 2715548 D identified by match to protein family HMM PF00665; transposase 2714631..2715548 Mycobacterium avium 104 4530768 YP_881871.1 CDS hypB NC_008595.1 2715631 2716002 D identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073; hydrogenase accessory protein HypB 2715631..2716002 Mycobacterium avium 104 4528206 YP_881872.1 CDS MAV_2681 NC_008595.1 2716404 2717459 D NADH ubiquinone oxidoreductase, 20 kDa subunit 2716404..2717459 Mycobacterium avium 104 4527874 YP_881873.1 CDS MAV_2682 NC_008595.1 2717507 2719303 D identified by match to protein family HMM PF00374; hydrogen:quinone oxidoreductase 2717507..2719303 Mycobacterium avium 104 4530597 YP_881874.1 CDS MAV_2683 NC_008595.1 2719307 2720257 D identified by match to protein family HMM PF01106; hypothetical protein 2719307..2720257 Mycobacterium avium 104 4526766 YP_881875.1 CDS MAV_2684 NC_008595.1 2720332 2720898 D hypothetical protein 2720332..2720898 Mycobacterium avium 104 4530255 YP_881876.1 CDS MAV_2685 NC_008595.1 2720895 2721548 D hypothetical protein 2720895..2721548 Mycobacterium avium 104 4527849 YP_881877.1 CDS MAV_2686 NC_008595.1 2721545 2722915 D hypothetical protein 2721545..2722915 Mycobacterium avium 104 4529884 YP_881878.1 CDS MAV_2687 NC_008595.1 2722920 2723489 D identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072; peptidase M52, hydrogen uptake protein 2722920..2723489 Mycobacterium avium 104 4529012 YP_881879.1 CDS MAV_2688 NC_008595.1 2723585 2723788 D alpha/beta hydrolase 2723585..2723788 Mycobacterium avium 104 4525697 YP_881880.1 CDS MAV_2689 NC_008595.1 2724085 2724198 D hypothetical protein 2724085..2724198 Mycobacterium avium 104 4527334 YP_881881.1 CDS dehII NC_008595.1 2724520 2725242 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01428; match to protein family HMM TIGR01493; haloacid dehalogenase, type II complement(2724520..2725242) Mycobacterium avium 104 4525546 YP_881882.1 CDS MAV_2691 NC_008595.1 2725778 2727358 D identified by match to protein family HMM PF00665; transposase 2725778..2727358 Mycobacterium avium 104 4526889 YP_881883.1 CDS MAV_2692 NC_008595.1 2727355 2728149 D identified by match to protein family HMM PF01695; helper protein 2727355..2728149 Mycobacterium avium 104 4528360 YP_881884.1 CDS MAV_2693 NC_008595.1 2728205 2728426 D hypothetical protein 2728205..2728426 Mycobacterium avium 104 4529952 YP_881885.1 CDS MAV_2694 NC_008595.1 2728694 2728879 D hypothetical protein 2728694..2728879 Mycobacterium avium 104 4526774 YP_881886.1 CDS MAV_2695 NC_008595.1 2728924 2729730 R identified by match to protein family HMM PF02551; acyl-CoA thioesterase complement(2728924..2729730) Mycobacterium avium 104 4530140 YP_881887.1 CDS MAV_2697 NC_008595.1 2729657 2730154 D transposase 2729657..2730154 Mycobacterium avium 104 4525716 YP_881888.1 CDS MAV_2696 NC_008595.1 2729891 2730730 R identified by match to protein family HMM PF00665; transposase complement(2729891..2730730) Mycobacterium avium 104 4528631 YP_881889.1 CDS MAV_2698 NC_008595.1 2730808 2731152 R identified by match to protein family HMM PF01527; ISAfe7, transposase OrfA complement(2730808..2731152) Mycobacterium avium 104 4530492 YP_881890.1 CDS MAV_2699 NC_008595.1 2731223 2731831 R hypothetical protein complement(2731223..2731831) Mycobacterium avium 104 4526697 YP_881891.1 CDS MAV_2700 NC_008595.1 2732013 2732852 R identified by match to protein family HMM PF00106; short chain dehydrogenase complement(2732013..2732852) Mycobacterium avium 104 4528873 YP_881892.1 CDS MAV_2701 NC_008595.1 2732843 2734975 R identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; acyl-CoA dehydrogenase complement(2732843..2734975) Mycobacterium avium 104 4530687 YP_881893.1 CDS MAV_2702 NC_008595.1 2734982 2736193 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(2734982..2736193) Mycobacterium avium 104 4528627 YP_881894.1 CDS MAV_2703 NC_008595.1 2736204 2737367 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(2736204..2737367) Mycobacterium avium 104 4527470 YP_881895.1 CDS MAV_2704 NC_008595.1 2737370 2738188 R identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F complement(2737370..2738188) Mycobacterium avium 104 4529369 YP_881896.1 CDS MAV_2705 NC_008595.1 2738296 2738889 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2738296..2738889 Mycobacterium avium 104 4529757 YP_881897.1 CDS MAV_2706 NC_008595.1 2738910 2739755 R identified by match to protein family HMM PF00561; alpha/beta hydrolase complement(2738910..2739755) Mycobacterium avium 104 4525496 YP_881898.1 CDS MAV_2708 NC_008595.1 2741776 2742429 R identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; metal-dependent phosphohydrolase complement(2741776..2742429) Mycobacterium avium 104 4527343 YP_881899.1 CDS MAV_2709 NC_008595.1 2742475 2743185 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase complement(2742475..2743185) Mycobacterium avium 104 4527727 YP_881900.1 CDS MAV_2710 NC_008595.1 2743366 2743728 R identified by match to protein family HMM PF00553; cellulose-binding domain-containing protein complement(2743366..2743728) Mycobacterium avium 104 4529405 YP_881901.1 CDS MAV_2711 NC_008595.1 2744027 2744869 D AraC family transcriptional regulator 2744027..2744869 Mycobacterium avium 104 4526231 YP_881902.1 CDS MAV_2712 NC_008595.1 2744850 2745224 D identified by match to protein family HMM PF00903; glyoxalase 2744850..2745224 Mycobacterium avium 104 4528781 YP_881903.1 CDS MAV_2713 NC_008595.1 2745375 2745686 D identified by match to protein family HMM PF05305; hypothetical protein 2745375..2745686 Mycobacterium avium 104 4527827 YP_881904.1 CDS MAV_2714 NC_008595.1 2746378 2746734 R hypothetical protein complement(2746378..2746734) Mycobacterium avium 104 4527605 YP_881905.1 CDS MAV_2716 NC_008595.1 2746759 2748201 D an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; biotin carboxylase-like protein 2746759..2748201 Mycobacterium avium 104 4527846 YP_881906.1 CDS MAV_2718 NC_008595.1 2748198 2749373 D identified by match to protein family HMM PF00144; beta-lactamase 2748198..2749373 Mycobacterium avium 104 4529020 YP_881907.1 CDS thiI NC_008595.1 2749370 2750599 R Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI complement(2749370..2750599) Mycobacterium avium 104 4526713 YP_881908.1 CDS MAV_2719 NC_008595.1 2750773 2751207 D identified by match to protein family HMM PF00011; Hsp20/alpha crystallin family protein 2750773..2751207 Mycobacterium avium 104 4527962 YP_881909.1 CDS MAV_2720 NC_008595.1 2751267 2751647 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(2751267..2751647) Mycobacterium avium 104 4530018 YP_881910.1 CDS MAV_2721 NC_008595.1 2751760 2752179 D identified by match to protein family HMM PF00011; 18 kDa antigen 2 2751760..2752179 Mycobacterium avium 104 4526229 YP_881911.1 CDS MAV_2722 NC_008595.1 2752492 2752812 D identified by match to protein family HMM PF00226; DnaJ domain-containing protein 2752492..2752812 Mycobacterium avium 104 4529322 YP_881912.1 CDS MAV_2723 NC_008595.1 2752865 2754271 R identified by match to protein family HMM PF00668; PapA2 protein complement(2752865..2754271) Mycobacterium avium 104 4528231 YP_881913.1 CDS MAV_2724 NC_008595.1 2754245 2754430 D hypothetical protein 2754245..2754430 Mycobacterium avium 104 4526505 YP_881914.1 CDS MAV_2725 NC_008595.1 2754921 2755478 D identified by match to protein family HMM PF00254; peptidyl-prolyl cis-trans isomerase domain-containing protein 2754921..2755478 Mycobacterium avium 104 4530542 YP_881915.1 CDS MAV_2726 NC_008595.1 2755526 2756287 R identified by match to protein family HMM PF00106; acyl-CoA dehydrogenase complement(2755526..2756287) Mycobacterium avium 104 4528720 YP_881916.1 CDS MAV_2727 NC_008595.1 2756500 2757183 D hypothetical protein 2756500..2757183 Mycobacterium avium 104 4529112 YP_881917.1 CDS MAV_2728 NC_008595.1 2757228 2757995 D hypothetical protein 2757228..2757995 Mycobacterium avium 104 4525999 YP_881918.1 CDS MAV_2729 NC_008595.1 2758015 2759250 R identified by match to protein family HMM PF05343; match to protein family HMM TIGR03106; hydrolase, peptidase M42 family protein complement(2758015..2759250) Mycobacterium avium 104 4527960 YP_881919.1 CDS MAV_2730 NC_008595.1 2759333 2760214 R identified by match to protein family HMM PF03328; citrate lyase beta chain (Citrase beta chain) (citrate(pro-3S)-lyase beta chain) complement(2759333..2760214) Mycobacterium avium 104 4526947 YP_881920.1 CDS MAV_2731 NC_008595.1 2760242 2760343 R hypothetical protein complement(2760242..2760343) Mycobacterium avium 104 4527596 YP_881921.1 CDS MAV_2732 NC_008595.1 2760383 2761306 D identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase 2760383..2761306 Mycobacterium avium 104 4526654 YP_881922.1 CDS zwf NC_008595.1 2761320 2762837 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(2761320..2762837) Mycobacterium avium 104 4530172 YP_881923.1 CDS MAV_2734 NC_008595.1 2762978 2763160 D hypothetical protein 2762978..2763160 Mycobacterium avium 104 4527601 YP_881924.1 CDS MAV_2735 NC_008595.1 2763186 2764163 R hypothetical protein complement(2763186..2764163) Mycobacterium avium 104 4526783 YP_881925.1 CDS MAV_2736 NC_008595.1 2764240 2765751 R identified by match to protein family HMM PF01494; hypothetical protein complement(2764240..2765751) Mycobacterium avium 104 4529960 YP_881926.1 CDS hrpA NC_008595.1 2765831 2769784 R identified by match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM PF07717; match to protein family HMM TIGR01967; ATP-dependent helicase HrpA complement(2765831..2769784) Mycobacterium avium 104 4527439 YP_881927.1 CDS MAV_2738 NC_008595.1 2769960 2770943 D identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 2769960..2770943 Mycobacterium avium 104 4529197 YP_881928.1 CDS MAV_2739 NC_008595.1 2771067 2772041 D identified by match to protein family HMM PF03631; hypothetical protein 2771067..2772041 Mycobacterium avium 104 4526557 YP_881929.1 CDS MAV_2740 NC_008595.1 2772100 2772873 D identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 2772100..2772873 Mycobacterium avium 104 4527967 YP_881930.1 CDS MAV_2741 NC_008595.1 2773002 2773592 D identified by match to protein family HMM PF01083; serine esterase, cutinase 2773002..2773592 Mycobacterium avium 104 4525797 YP_881931.1 CDS MAV_2742 NC_008595.1 2773605 2774264 D hypothetical protein 2773605..2774264 Mycobacterium avium 104 4527122 YP_881932.1 CDS MAV_2743 NC_008595.1 2774297 2774551 D hypothetical protein 2774297..2774551 Mycobacterium avium 104 4526065 YP_881933.1 CDS MAV_2744 NC_008595.1 2774673 2775515 R identified by match to protein family HMM PF03473; mosc domain-containing protein complement(2774673..2775515) Mycobacterium avium 104 4530149 YP_881934.1 CDS MAV_2745 NC_008595.1 2775593 2776321 R hypothetical protein complement(2775593..2776321) Mycobacterium avium 104 4529235 YP_881935.1 CDS MAV_2746 NC_008595.1 2776455 2777840 R identified by match to protein family HMM PF00823; PPE family protein complement(2776455..2777840) Mycobacterium avium 104 4527728 YP_881936.1 CDS MAV_2747 NC_008595.1 2778301 2779473 D identified by match to protein family HMM PF03033; rhamnosyltransferase RtfA 2778301..2779473 Mycobacterium avium 104 4526631 YP_881937.1 CDS MAV_2748 NC_008595.1 2779532 2780581 D hypothetical protein 2779532..2780581 Mycobacterium avium 104 4528707 YP_881938.1 CDS MAV_2749 NC_008595.1 2780587 2782107 R identified by match to protein family HMM PF00355; match to protein family HMM PF01266; FAD dependent oxidoreductase complement(2780587..2782107) Mycobacterium avium 104 4528909 YP_881939.1 CDS MAV_2750 NC_008595.1 2782152 2782931 R hypothetical protein complement(2782152..2782931) Mycobacterium avium 104 4529947 YP_881940.1 CDS MAV_2751 NC_008595.1 2783054 2784337 D identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 2783054..2784337 Mycobacterium avium 104 4528092 YP_881941.1 CDS MAV_2752 NC_008595.1 2784467 2784871 D identified by match to protein family HMM PF01475; Fur family transcriptional regulator 2784467..2784871 Mycobacterium avium 104 4528441 YP_881942.1 CDS katG NC_008595.1 2784908 2787154 D identified by match to protein family HMM PF00141; match to protein family HMM TIGR00198; catalase/peroxidase HPI 2784908..2787154 Mycobacterium avium 104 4528744 YP_881943.1 CDS MAV_2754 NC_008595.1 2787207 2788022 R hypothetical protein complement(2787207..2788022) Mycobacterium avium 104 4529250 YP_881944.1 CDS MAV_2755 NC_008595.1 2788416 2789606 D identified by match to protein family HMM PF00534; glycosyl transferase 2788416..2789606 Mycobacterium avium 104 4530104 YP_881945.1 CDS MAV_2756 NC_008595.1 2789600 2790358 D methyltransferase 2789600..2790358 Mycobacterium avium 104 4529273 YP_881946.1 CDS MAV_2757 NC_008595.1 2790345 2791415 D hypothetical protein 2790345..2791415 Mycobacterium avium 104 4528032 YP_881947.1 CDS MAV_2758 NC_008595.1 2791420 2792079 R secreted protein complement(2791420..2792079) Mycobacterium avium 104 4529036 YP_881948.1 CDS MAV_2759 NC_008595.1 2792361 2792909 D identified by match to protein family HMM PF01083; serine esterase, cutinase 2792361..2792909 Mycobacterium avium 104 4527908 YP_881949.1 CDS MAV_2760 NC_008595.1 2793098 2793217 R hypothetical protein complement(2793098..2793217) Mycobacterium avium 104 4526425 YP_881950.1 CDS MAV_2761 NC_008595.1 2793560 2794381 D identified by match to protein family HMM PF00722; match to protein family HMM TIGR01409; glycosyl hydrolases family protein 16 2793560..2794381 Mycobacterium avium 104 4526312 YP_881951.1 CDS MAV_2762 NC_008595.1 2794400 2795245 R identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein complement(2794400..2795245) Mycobacterium avium 104 4526005 YP_881952.1 CDS MAV_2763 NC_008595.1 2795275 2795946 R hypothetical protein complement(2795275..2795946) Mycobacterium avium 104 4526274 YP_881953.1 CDS MAV_2764 NC_008595.1 2796087 2796341 D hypothetical protein 2796087..2796341 Mycobacterium avium 104 4529186 YP_881954.1 CDS MAV_2765 NC_008595.1 2796413 2797867 R identified by match to protein family HMM PF00171; P-cumic aldehyde dehydrogenase complement(2796413..2797867) Mycobacterium avium 104 4530310 YP_881955.1 CDS MAV_2766 NC_008595.1 2797995 2798918 R identified by match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD dependent epimerase/dehydratase complement(2797995..2798918) Mycobacterium avium 104 4528159 YP_881956.1 CDS MAV_2767 NC_008595.1 2798949 2800133 R identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain-containing protein complement(2798949..2800133) Mycobacterium avium 104 4527515 YP_881957.1 CDS MAV_2768 NC_008595.1 2800220 2800579 D hypothetical protein 2800220..2800579 Mycobacterium avium 104 4530412 YP_881958.1 CDS MAV_2769 NC_008595.1 2800657 2801538 D identified by match to protein family HMM PF03060; oxidoreductase, 2-nitropropane dioxygenase 2800657..2801538 Mycobacterium avium 104 4527043 YP_881959.1 CDS tpx NC_008595.1 2801551 2802045 R antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase complement(2801551..2802045) Mycobacterium avium 104 4530050 YP_881960.1 CDS MAV_2771 NC_008595.1 2802983 2803105 R hypothetical protein complement(2802983..2803105) Mycobacterium avium 104 4530318 YP_881961.1 CDS MAV_2773 NC_008595.1 2803152 2803895 D identified by match to protein family HMM PF01965; DJ-1/PfpI family protein 2803152..2803895 Mycobacterium avium 104 4527792 YP_881962.1 CDS MAV_2774 NC_008595.1 2803896 2804381 R hypothetical protein complement(2803896..2804381) Mycobacterium avium 104 4530281 YP_881963.1 CDS MAV_2775 NC_008595.1 2804455 2805219 D identified by match to protein family HMM PF00106; short chain dehydrogenase 2804455..2805219 Mycobacterium avium 104 4529388 YP_881964.1 CDS MAV_2776 NC_008595.1 2805253 2805921 R hypothetical protein complement(2805253..2805921) Mycobacterium avium 104 4525525 YP_881965.2 CDS MAV_2777 NC_008595.1 2805975 2807813 R activates fatty acids by binding to coenzyme A; fatty-acid--CoA ligase complement(2805975..2807813) Mycobacterium avium 104 4528783 YP_881966.1 CDS MAV_2778 NC_008595.1 2807994 2808461 D hypothetical protein 2807994..2808461 Mycobacterium avium 104 4529342 YP_881967.1 CDS MAV_2779 NC_008595.1 2808503 2809666 R identified by match to protein family HMM PF00296; limonene 1,2-monooxygenase complement(2808503..2809666) Mycobacterium avium 104 4530474 YP_881968.1 CDS MAV_2780 NC_008595.1 2809850 2810230 R hypothetical protein complement(2809850..2810230) Mycobacterium avium 104 4526745 YP_881969.1 CDS aceA NC_008595.1 2810353 2812641 R identified by match to protein family HMM PF00463; match to protein family HMM TIGR01346; isocitrate lyase complement(2810353..2812641) Mycobacterium avium 104 4528376 YP_881970.1 CDS MAV_2782 NC_008595.1 2812860 2813573 R identified by match to protein family HMM PF00753; metallo-beta-lactamase complement(2812860..2813573) Mycobacterium avium 104 4529858 YP_881971.1 CDS MAV_2783 NC_008595.1 2813692 2814015 D identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 2813692..2814015 Mycobacterium avium 104 4526224 YP_881972.1 CDS MAV_2784 NC_008595.1 2814012 2814419 D hypothetical protein 2814012..2814419 Mycobacterium avium 104 4528563 YP_881973.1 CDS MAV_2785 NC_008595.1 2814470 2814919 D similar to streptomyces cyclase/dehydrase; identified by match to protein family HMM PF03364; cyclase/dehydrase 2814470..2814919 Mycobacterium avium 104 4530343 YP_881974.1 CDS MAV_2786 NC_008595.1 2815007 2815615 D identified by match to protein family HMM PF01161; match to protein family HMM TIGR00481; phosphatidylethanolamine-binding protein 2815007..2815615 Mycobacterium avium 104 4530772 YP_881975.1 CDS MAV_2787 NC_008595.1 2815625 2817193 R identified by match to protein family HMM PF01266; match to protein family HMM PF01593; FAD dependent oxidoreductase, putative complement(2815625..2817193) Mycobacterium avium 104 4528651 YP_881976.1 CDS MAV_2788 NC_008595.1 2817302 2817901 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2817302..2817901 Mycobacterium avium 104 4528958 YP_881977.1 CDS MAV_2789 NC_008595.1 2817920 2818813 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(2817920..2818813) Mycobacterium avium 104 4526200 YP_881978.1 CDS MAV_2790 NC_008595.1 2818899 2819291 D identified by match to protein family HMM PF01361; malonate semialdehyde decarboxylase 2818899..2819291 Mycobacterium avium 104 4530769 YP_881979.1 CDS MAV_2791 NC_008595.1 2819288 2820271 D identified by similarity to GB:AAF98273.1; match to protein family HMM PF03060; oxidoreductase, 2-nitropropane dioxygenase 2819288..2820271 Mycobacterium avium 104 4525828 YP_881980.1 CDS MAV_2792 NC_008595.1 2820347 2820487 D hypothetical protein 2820347..2820487 Mycobacterium avium 104 4529580 YP_881981.1 CDS MAV_2794 NC_008595.1 2821149 2821643 D hypothetical protein 2821149..2821643 Mycobacterium avium 104 4525609 YP_881982.1 CDS MAV_2795 NC_008595.1 2821786 2822367 D hypothetical protein 2821786..2822367 Mycobacterium avium 104 4525967 YP_881983.1 CDS MAV_2796 NC_008595.1 2822398 2823363 D identified by match to protein family HMM PF01266; FAD dependent oxidoreductase 2822398..2823363 Mycobacterium avium 104 4525726 YP_881984.1 CDS MAV_2797 NC_008595.1 2823366 2823755 R identified by match to protein family HMM PF04020; hypothetical protein complement(2823366..2823755) Mycobacterium avium 104 4525582 YP_881985.1 CDS MAV_2798 NC_008595.1 2823801 2824868 R identified by match to protein family HMM PF04909; amidohydrolase complement(2823801..2824868) Mycobacterium avium 104 4526543 YP_881986.1 CDS MAV_2799 NC_008595.1 2824867 2826219 D identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00891; MFS transporter, sialate:H+ symporter (SHS) family protein 2824867..2826219 Mycobacterium avium 104 4529679 YP_881987.1 CDS MAV_2800 NC_008595.1 2826297 2827601 R identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; competence damage-inducible protein A complement(2826297..2827601) Mycobacterium avium 104 4528496 YP_881988.1 CDS MAV_2801 NC_008595.1 2827661 2827966 R identified by match to protein family HMM PF01910; match to protein family HMM TIGR00106; hypothetical protein complement(2827661..2827966) Mycobacterium avium 104 4527558 YP_881989.1 CDS dtd NC_008595.1 2828052 2828483 D hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 2828052..2828483 Mycobacterium avium 104 4526899 YP_881990.1 CDS MAV_2803 NC_008595.1 2828515 2829423 D identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein 2828515..2829423 Mycobacterium avium 104 4526991 YP_881991.1 CDS MAV_2804 NC_008595.1 2829430 2830455 R identified by match to protein family HMM PF00107; zinc-binding dehydrogenase complement(2829430..2830455) Mycobacterium avium 104 4525816 YP_881992.1 CDS MAV_2805 NC_008595.1 2830487 2832439 R 4-hydroxyacetophenone monooxygenase complement(2830487..2832439) Mycobacterium avium 104 4526434 YP_881993.1 CDS MAV_2806 NC_008595.1 2832565 2833974 R identified by match to protein family HMM PF02720; hypothetical protein complement(2832565..2833974) Mycobacterium avium 104 4529870 YP_881994.1 CDS MAV_2807 NC_008595.1 2834123 2835253 D identified by match to protein family HMM PF03060; oxidoreductase, 2-nitropropane dioxygenase 2834123..2835253 Mycobacterium avium 104 4525860 YP_881995.1 CDS MAV_2808 NC_008595.1 2835262 2835492 R hypothetical protein complement(2835262..2835492) Mycobacterium avium 104 4527885 YP_881996.1 CDS MAV_2809 NC_008595.1 2835629 2835958 R hypothetical protein complement(2835629..2835958) Mycobacterium avium 104 4530719 YP_881997.1 CDS MAV_2810 NC_008595.1 2835955 2836353 R hypothetical protein complement(2835955..2836353) Mycobacterium avium 104 4529899 YP_881998.1 CDS MAV_2811 NC_008595.1 2836566 2837852 D cytochrome P450 124 2836566..2837852 Mycobacterium avium 104 4530505 YP_881999.1 CDS MAV_2812 NC_008595.1 2837922 2838890 D identified by match to protein family HMM PF00107; aldehyde dehydrogenase 2837922..2838890 Mycobacterium avium 104 4525607 YP_882000.1 CDS MAV_2813 NC_008595.1 2838935 2839501 D hypothetical protein 2838935..2839501 Mycobacterium avium 104 4525920 YP_882001.1 CDS MAV_2814 NC_008595.1 2839518 2840645 R hypothetical protein complement(2839518..2840645) Mycobacterium avium 104 4530795 YP_882002.1 CDS MAV_2815 NC_008595.1 2840912 2841118 D hypothetical protein 2840912..2841118 Mycobacterium avium 104 4527755 YP_882003.1 CDS MAV_2816 NC_008595.1 2841247 2842239 D identified by match to protein family HMM PF00756; antigen 85-B 2841247..2842239 Mycobacterium avium 104 4530319 YP_882004.1 CDS MAV_2817 NC_008595.1 2842350 2842913 D catalyzes the interconversion of chorismate to prephenate; chorismate mutase 2842350..2842913 Mycobacterium avium 104 4527480 YP_882005.1 CDS MAV_2818 NC_008595.1 2843127 2843456 D identified by match to protein family HMM PF06737; resuscitation-promoting factor RpfA 2843127..2843456 Mycobacterium avium 104 4528250 YP_882006.1 CDS MAV_2819 NC_008595.1 2843510 2843971 D similar to streptomyces cyclase/dehydrase; identified by match to protein family HMM PF03364; cyclase/dehydrase 2843510..2843971 Mycobacterium avium 104 4527749 YP_882007.1 CDS MAV_2820 NC_008595.1 2843968 2844801 D identified by match to protein family HMM PF00106; short chain dehydrogenase 2843968..2844801 Mycobacterium avium 104 4529068 YP_882008.1 CDS MAV_2821 NC_008595.1 2844814 2845236 D LppE protein 2844814..2845236 Mycobacterium avium 104 4527853 YP_882009.1 CDS MAV_2822 NC_008595.1 2845293 2846645 D identified by match to protein family HMM PF00067; P450 heme-thiolate protein 2845293..2846645 Mycobacterium avium 104 4527822 YP_882010.1 CDS MAV_2823 NC_008595.1 2846707 2847150 D identified by match to protein family HMM PF07366; match to protein family HMM PF07858; limonene-1,2-epoxide hydrolase catalytic domain-containing superfamily protein 2846707..2847150 Mycobacterium avium 104 4526332 YP_882011.1 CDS MAV_2824 NC_008595.1 2847159 2848337 R hypothetical protein complement(2847159..2848337) Mycobacterium avium 104 4530471 YP_882012.1 CDS MAV_2825 NC_008595.1 2848438 2848551 D hypothetical protein 2848438..2848551 Mycobacterium avium 104 4526050 YP_882013.1 CDS MAV_2826 NC_008595.1 2848561 2849874 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(2848561..2849874) Mycobacterium avium 104 4530545 YP_882014.1 CDS MAV_2827 NC_008595.1 2849862 2851133 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 2849862..2851133 Mycobacterium avium 104 4529490 YP_882015.1 CDS MAV_2828 NC_008595.1 2851796 2852914 R identified by match to protein family HMM PF04909; amidohydrolase complement(2851796..2852914) Mycobacterium avium 104 4526178 YP_882016.1 CDS glnA NC_008595.1 2852925 2854277 R identified by match to protein family HMM PF00120; glutamine synthetase catalytic domain complement(2852925..2854277) Mycobacterium avium 104 4528210 YP_882017.1 CDS MAV_2830 NC_008595.1 2854319 2855200 R identified by match to protein family HMM PF00296; hypothetical protein complement(2854319..2855200) Mycobacterium avium 104 4528614 YP_882018.1 CDS pcaC NC_008595.1 2855233 2855727 R identified by match to protein family HMM PF02627; hypothetical protein complement(2855233..2855727) Mycobacterium avium 104 4525592 YP_882019.1 CDS MAV_2832 NC_008595.1 2855782 2857830 R identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; drug transporter complement(2855782..2857830) Mycobacterium avium 104 4526092 YP_882020.1 CDS bfr NC_008595.1 2857951 2858430 R identified by match to protein family HMM PF00210; match to protein family HMM TIGR00754; bacterioferritin complement(2857951..2858430) Mycobacterium avium 104 4529234 YP_882021.1 CDS MAV_2834 NC_008595.1 2858781 2858966 D identified by match to protein family HMM PF04324; hypothetical protein 2858781..2858966 Mycobacterium avium 104 4530705 YP_882022.1 CDS MAV_2835 NC_008595.1 2859023 2859772 R identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase complement(2859023..2859772) Mycobacterium avium 104 4526824 YP_882023.1 CDS MAV_2836 NC_008595.1 2859787 2860230 R identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase complement(2859787..2860230) Mycobacterium avium 104 4525714 YP_882024.1 CDS MAV_2837 NC_008595.1 2860241 2860942 R hypothetical protein complement(2860241..2860942) Mycobacterium avium 104 4530611 YP_882025.1 CDS MAV_2838 NC_008595.1 2860979 2861914 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; hydrogen peroxide-inducible genes activator complement(2860979..2861914) Mycobacterium avium 104 4527168 YP_882026.1 CDS MAV_2839 NC_008595.1 2862029 2862616 D identified by match to protein family HMM PF00578; alkylhydroperoxide reductase 2862029..2862616 Mycobacterium avium 104 4526385 YP_882027.1 CDS ahpD NC_008595.1 2862656 2863192 D identified by match to protein family HMM PF02627; match to protein family HMM TIGR00777; match to protein family HMM TIGR00778; alkylhydroperoxidase, AhpD family protein 2862656..2863192 Mycobacterium avium 104 4527294 YP_882028.1 CDS MAV_2842 NC_008595.1 2863215 2864537 D identified by match to protein family HMM PF00128; alpha-amylase 3 2863215..2864537 Mycobacterium avium 104 4527984 YP_882029.1 CDS MAV_2841 NC_008595.1 2864534 2864971 R hypothetical protein complement(2864534..2864971) Mycobacterium avium 104 4529423 YP_882030.1 CDS MAV_2843 NC_008595.1 2864990 2866252 D identified by match to protein family HMM PF01070; LldD2 protein 2864990..2866252 Mycobacterium avium 104 4530516 YP_882031.1 CDS MAV_2845 NC_008595.1 2868767 2869144 D identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 2868767..2869144 Mycobacterium avium 104 4527299 YP_882032.1 CDS MAV_2846 NC_008595.1 2869185 2869517 D hypothetical protein 2869185..2869517 Mycobacterium avium 104 4528014 YP_882033.1 CDS MAV_2847 NC_008595.1 2869560 2870195 D hypothetical protein 2869560..2870195 Mycobacterium avium 104 4530579 YP_882034.1 CDS MAV_2848 NC_008595.1 2870203 2870928 D identified by match to protein family HMM PF01904; hypothetical protein 2870203..2870928 Mycobacterium avium 104 4527065 YP_882035.1 CDS MAV_2849 NC_008595.1 2870975 2872207 D identified by match to protein family HMM PF00070; match to protein family HMM PF07992; anthranilate dioxygenase reductase 2870975..2872207 Mycobacterium avium 104 4529277 YP_882036.1 CDS MAV_2850 NC_008595.1 2872212 2874341 R identified by match to protein family HMM PF01370; hypothetical protein complement(2872212..2874341) Mycobacterium avium 104 4527414 YP_882037.1 CDS MAV_2851 NC_008595.1 2874473 2875957 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(2874473..2875957) Mycobacterium avium 104 4527367 YP_882038.1 CDS MAV_2852 NC_008595.1 2875976 2878420 R identified by match to protein family HMM PF02515; caib/baif family protein complement(2875976..2878420) Mycobacterium avium 104 4526096 YP_882039.1 CDS MAV_2853 NC_008595.1 2878610 2879527 D BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 2878610..2879527 Mycobacterium avium 104 4530458 YP_882040.1 CDS MAV_2854 NC_008595.1 2879624 2880472 D identified by match to protein family HMM PF00106; short chain dehydrogenase 2879624..2880472 Mycobacterium avium 104 4529432 YP_882041.1 CDS xfp NC_008595.1 2880517 2882931 D identified by match to protein family HMM PF03894; phosphoketolase 2880517..2882931 Mycobacterium avium 104 4526289 YP_882042.1 CDS MAV_2856 NC_008595.1 2883035 2883790 D identified by match to protein family HMM PF02517; caax amino protease 2883035..2883790 Mycobacterium avium 104 4528385 YP_882043.1 CDS MAV_2857 NC_008595.1 2883804 2884820 R identified by match to protein family HMM PF00107; match to protein family HMM TIGR02822; zinc-binding alcohol dehydrogenase complement(2883804..2884820) Mycobacterium avium 104 4529066 YP_882044.1 CDS MAV_2858 NC_008595.1 2884880 2885230 R identified by match to protein family HMM PF04226; integral membrane protein complement(2884880..2885230) Mycobacterium avium 104 4527241 YP_882045.1 CDS MAV_2859 NC_008595.1 2885325 2886482 R identified by match to protein family HMM PF07174; ModD protein complement(2885325..2886482) Mycobacterium avium 104 4528704 YP_882046.1 CDS MAV_2860 NC_008595.1 2886604 2887719 R identified by match to protein family HMM PF00005; match to protein family HMM PF03459; molybdenum import ATP-binding protein ModC complement(2886604..2887719) Mycobacterium avium 104 4528755 YP_882047.1 CDS modB NC_008595.1 2887729 2888493 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01581; match to protein family HMM TIGR02141; molybdate ABC transporter permease complement(2887729..2888493) Mycobacterium avium 104 4527229 YP_882048.1 CDS MAV_2862 NC_008595.1 2888668 2889777 R hypothetical protein complement(2888668..2889777) Mycobacterium avium 104 4526671 YP_882049.1 CDS modA NC_008595.1 2890037 2890804 R identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256; molybdate ABC transporter periplasmic molybdate-binding protein complement(2890037..2890804) Mycobacterium avium 104 4526705 YP_882050.1 CDS MAV_2864 NC_008595.1 2891085 2891756 D identified by match to protein family HMM PF00106; short chain dehydrogenase 2891085..2891756 Mycobacterium avium 104 4530044 YP_882051.1 CDS MAV_2865 NC_008595.1 2891810 2892727 D identified by match to protein family HMM PF00296; hypothetical protein 2891810..2892727 Mycobacterium avium 104 4530320 YP_882052.1 CDS MAV_2866 NC_008595.1 2892843 2893226 D hypothetical protein 2892843..2893226 Mycobacterium avium 104 4528964 YP_882053.1 CDS MAV_2867 NC_008595.1 2893405 2894790 D identified by match to protein family HMM PF00070; match to protein family HMM PF07992; DoxD family protein/pyridine nucleotide-disulfide oxidoreductase 2893405..2894790 Mycobacterium avium 104 4525837 YP_882054.1 CDS MAV_2868 NC_008595.1 2894898 2895320 R identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; hypothetical protein complement(2894898..2895320) Mycobacterium avium 104 4528311 YP_882055.1 CDS MAV_2869 NC_008595.1 2895746 2896165 D identified by match to protein family HMM PF03965; CopY family transcriptional regulator 2895746..2896165 Mycobacterium avium 104 4528643 YP_882056.1 CDS MAV_2870 NC_008595.1 2896180 2897130 D identified by match to protein family HMM PF01435; match to protein family HMM PF05569; integral membrane protein 2896180..2897130 Mycobacterium avium 104 4528965 YP_882057.1 CDS gnd NC_008595.1 2897206 2898690 D catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 2897206..2898690 Mycobacterium avium 104 4527752 YP_882058.1 CDS MAV_2872 NC_008595.1 2898730 2900166 D catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase 2898730..2900166 Mycobacterium avium 104 4528321 YP_882059.1 CDS MAV_2873 NC_008595.1 2900251 2900556 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 2900251..2900556 Mycobacterium avium 104 4527840 YP_882060.1 CDS MAV_2874 NC_008595.1 2900549 2902114 D converts medium- to long-chain aliphatic fatty acids into acyl adenylate; involved in mycobactin synthesis; long-chain-fatty-acid--[acyl-carrier-protein] ligase 2900549..2902114 Mycobacterium avium 104 4527382 YP_882061.1 CDS MAV_2876 NC_008595.1 2902115 2903290 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 2902115..2903290 Mycobacterium avium 104 4530086 YP_882062.1 CDS MAV_2875 NC_008595.1 2903257 2903697 R hypothetical protein complement(2903257..2903697) Mycobacterium avium 104 4529908 YP_882063.1 CDS MAV_2877 NC_008595.1 2903709 2904185 R hypothetical protein complement(2903709..2904185) Mycobacterium avium 104 4526699 YP_882064.1 CDS MAV_2878 NC_008595.1 2904219 2905583 D identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; CBS domain-containing protein 2904219..2905583 Mycobacterium avium 104 4527762 YP_882065.1 CDS MAV_2879 NC_008595.1 2905580 2906620 D identified by match to protein family HMM PF00571; match to protein family HMM PF01595; CBS domain-containing protein 2905580..2906620 Mycobacterium avium 104 4526035 YP_882066.1 CDS glcB NC_008595.1 2906905 2909109 D catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 2906905..2909109 Mycobacterium avium 104 4525650 YP_882067.1 CDS MAV_2881 NC_008595.1 2909210 2911261 D hypothetical protein 2909210..2911261 Mycobacterium avium 104 4528340 YP_882068.1 CDS MAV_2882 NC_008595.1 2911532 2912509 D hypothetical protein 2911532..2912509 Mycobacterium avium 104 4528291 YP_882069.1 CDS MAV_2883 NC_008595.1 2912580 2913209 D identified by match to protein family HMM PF00356; match to protein family HMM PF00440; TetR family transcriptional regulator 2912580..2913209 Mycobacterium avium 104 4526381 YP_882070.1 CDS gcvP NC_008595.1 2913237 2916062 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase complement(2913237..2916062) Mycobacterium avium 104 4527187 YP_882071.1 CDS MAV_2885 NC_008595.1 2916396 2917025 R MerR family transcriptional regulator complement(2916396..2917025) Mycobacterium avium 104 4527943 YP_882072.1 CDS MAV_2886 NC_008595.1 2917309 2917749 R identified by match to protein family HMM PF02577; hypothetical protein complement(2917309..2917749) Mycobacterium avium 104 4528412 YP_882073.1 CDS MAV_2887 NC_008595.1 2917916 2918668 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(2917916..2918668) Mycobacterium avium 104 4526510 YP_882074.1 CDS MAV_2888 NC_008595.1 2918668 2919147 R identified by match to protein family HMM PF00498; forkhead-associated protein complement(2918668..2919147) Mycobacterium avium 104 4525732 YP_882075.1 CDS gcvH NC_008595.1 2919458 2919856 R part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H complement(2919458..2919856) Mycobacterium avium 104 4529614 YP_882076.1 CDS MAV_2890 NC_008595.1 2919883 2920722 R identified by match to protein family HMM PF05949; hypothetical protein complement(2919883..2920722) Mycobacterium avium 104 4526484 YP_882077.1 CDS MAV_2891 NC_008595.1 2920724 2921056 R identified by match to protein family HMM PF06947; integral membrane protein complement(2920724..2921056) Mycobacterium avium 104 4525866 YP_882078.1 CDS MAV_2892 NC_008595.1 2921118 2922044 R identified by match to protein family HMM PF05949; hypothetical protein complement(2921118..2922044) Mycobacterium avium 104 4525985 YP_882079.1 CDS MAV_2893 NC_008595.1 2922037 2922666 R identified by match to protein family HMM PF01066; CDP-alcohol phosphatidyltransferase complement(2922037..2922666) Mycobacterium avium 104 4530209 YP_882080.1 CDS MAV_2894 NC_008595.1 2922721 2925054 R SecA2; functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond to SecA2; which is non-essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(2922721..2925054) Mycobacterium avium 104 4525990 YP_882081.1 CDS MAV_2895 NC_008595.1 2925107 2926753 R identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; hypothetical protein complement(2925107..2926753) Mycobacterium avium 104 4528621 YP_882082.1 CDS MAV_2896 NC_008595.1 2926844 2928763 D identified by match to protein family HMM PF00005; match to protein family HMM PF06472; SbmA protein 2926844..2928763 Mycobacterium avium 104 4528737 YP_882083.1 CDS MAV_2897 NC_008595.1 2928828 2930321 R identified by match to protein family HMM PF00890; match to protein family HMM PF01266; hypothetical protein complement(2928828..2930321) Mycobacterium avium 104 4530728 YP_882084.1 CDS MAV_2898 NC_008595.1 2930371 2930859 R hypothetical protein complement(2930371..2930859) Mycobacterium avium 104 4529380 YP_882085.1 CDS MAV_2899 NC_008595.1 2931013 2931696 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2931013..2931696) Mycobacterium avium 104 4528350 YP_882086.1 CDS MAV_2900 NC_008595.1 2931821 2932267 D identified by match to protein family HMM TIGR00026; hypothetical protein 2931821..2932267 Mycobacterium avium 104 4526535 YP_882087.1 CDS MAV_2901 NC_008595.1 2932285 2932959 R hypothetical protein complement(2932285..2932959) Mycobacterium avium 104 4527829 YP_882088.1 CDS MAV_2902 NC_008595.1 2933058 2933984 R C-5 sterol desaturase complement(2933058..2933984) Mycobacterium avium 104 4529514 YP_882089.1 CDS MAV_2903 NC_008595.1 2934016 2934735 R identified by match to protein family HMM PF02308; Mg2+ transporter-C (MgtC) family protein complement(2934016..2934735) Mycobacterium avium 104 4527634 YP_882090.1 CDS MAV_2904 NC_008595.1 2934861 2935172 R identified by match to protein family HMM PF05305; hypothetical protein complement(2934861..2935172) Mycobacterium avium 104 4526805 YP_882091.1 CDS MAV_2905 NC_008595.1 2935178 2936563 R identified by match to protein family HMM PF00823; PPE family protein complement(2935178..2936563) Mycobacterium avium 104 4530081 YP_882092.1 CDS MAV_2906 NC_008595.1 2936601 2937845 R identified by match to protein family HMM PF00823; PPE family protein complement(2936601..2937845) Mycobacterium avium 104 4530230 YP_882093.1 CDS MAV_2907 NC_008595.1 2938141 2938449 R identified by match to protein family HMM PF05305; hypothetical protein complement(2938141..2938449) Mycobacterium avium 104 4526070 YP_882094.1 CDS MAV_2908 NC_008595.1 2938539 2938877 R identified by match to protein family HMM PF05305; hypothetical protein complement(2938539..2938877) Mycobacterium avium 104 4530510 YP_882095.1 CDS MAV_2909 NC_008595.1 2938912 2940315 R identified by match to protein family HMM PF00823; PPE family protein complement(2938912..2940315) Mycobacterium avium 104 4526728 YP_882096.1 CDS MAV_2910 NC_008595.1 2940393 2941652 R identified by match to protein family HMM PF00823; PPE family protein complement(2940393..2941652) Mycobacterium avium 104 4527512 YP_882097.1 CDS MAV_2911 NC_008595.1 2942538 2943812 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(2942538..2943812) Mycobacterium avium 104 4527116 YP_882098.1 CDS MAV_2912 NC_008595.1 2944028 2944363 R identified by match to protein family HMM PF05305; hypothetical protein complement(2944028..2944363) Mycobacterium avium 104 4527245 YP_882099.1 CDS MAV_2913 NC_008595.1 2944381 2945595 R identified by match to protein family HMM PF00823; PPE family protein complement(2944381..2945595) Mycobacterium avium 104 4529442 YP_882100.1 CDS MAV_2914 NC_008595.1 2945615 2946745 R identified by match to protein family HMM PF00823; PPE family protein complement(2945615..2946745) Mycobacterium avium 104 4527308 YP_882101.1 CDS MAV_2915 NC_008595.1 2946764 2947063 R identified by match to protein family HMM PF00934; PE family protein complement(2946764..2947063) Mycobacterium avium 104 4526658 YP_882102.1 CDS MAV_2916 NC_008595.1 2947613 2949403 R identified by match to protein family HMM PF00004; match to protein family HMM PF07719; ATPase AAA complement(2947613..2949403) Mycobacterium avium 104 4529296 YP_882103.1 CDS MAV_2917 NC_008595.1 2949442 2950650 R hypothetical protein complement(2949442..2950650) Mycobacterium avium 104 4526527 YP_882104.1 CDS MAV_2918 NC_008595.1 2950670 2952499 R identified by match to protein family HMM PF00082; subtilase complement(2950670..2952499) Mycobacterium avium 104 4527861 YP_882105.1 CDS snm NC_008595.1 2952477 2953988 R identified by match to protein family HMM PF04600; match to protein family HMM TIGR02958; secretion protein Snm4 complement(2952477..2953988) Mycobacterium avium 104 4529752 YP_882106.1 CDS MAV_2920 NC_008595.1 2954249 2955151 R hypothetical protein complement(2954249..2955151) Mycobacterium avium 104 4528516 YP_882107.1 CDS MAV_2921 NC_008595.1 2955260 2955544 R identified by match to protein family HMM PF06359; hypothetical protein complement(2955260..2955544) Mycobacterium avium 104 4530537 YP_882108.1 CDS MAV_2922 NC_008595.1 2955587 2955883 R identified by match to protein family HMM PF06013; hypothetical protein complement(2955587..2955883) Mycobacterium avium 104 4529270 YP_882109.1 CDS MAV_2923 NC_008595.1 2956141 2956326 R identified by match to protein family HMM PF00934; Excalibur protein complement(2956141..2956326) Mycobacterium avium 104 4528814 YP_882110.1 CDS MAV_2924 NC_008595.1 2956837 2958054 R identified by match to protein family HMM PF00823; PPE family protein complement(2956837..2958054) Mycobacterium avium 104 4529929 YP_882111.1 CDS MAV_2925 NC_008595.1 2958388 2959605 R identified by match to protein family HMM PF00823; PPE family protein complement(2958388..2959605) Mycobacterium avium 104 4528419 YP_882112.1 CDS MAV_2926 NC_008595.1 2960169 2961392 R identified by match to protein family HMM PF00823; PPE family protein complement(2960169..2961392) Mycobacterium avium 104 4528699 YP_882113.1 CDS MAV_2927 NC_008595.1 2961400 2961531 R hypothetical protein complement(2961400..2961531) Mycobacterium avium 104 4529471 YP_882114.1 CDS MAV_2928 NC_008595.1 2961618 2962883 R identified by match to protein family HMM PF00823; PPE family protein complement(2961618..2962883) Mycobacterium avium 104 4530712 YP_882115.1 CDS MAV_2929 NC_008595.1 2963362 2963526 R hypothetical protein complement(2963362..2963526) Mycobacterium avium 104 4528633 YP_882116.1 CDS MAV_2930 NC_008595.1 2963662 2963811 D hypothetical protein 2963662..2963811 Mycobacterium avium 104 4526317 YP_882117.1 CDS MAV_2931 NC_008595.1 2963828 2964991 D identified by match to protein family HMM PF00067; P450 heme-thiolate protein 2963828..2964991 Mycobacterium avium 104 4525809 YP_882118.1 CDS MAV_2932 NC_008595.1 2965034 2969161 R identified by match to protein family HMM PF01580; ftsk/SpoIIIE family protein complement(2965034..2969161) Mycobacterium avium 104 4529427 YP_882119.1 CDS MAV_2933 NC_008595.1 2969200 2970717 R identified by match to protein family HMM PF05108; hypothetical protein complement(2969200..2970717) Mycobacterium avium 104 4528650 YP_882120.1 CDS malQ NC_008595.1 2971114 2973285 D identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217; 4-alpha-glucanotransferase 2971114..2973285 Mycobacterium avium 104 4528128 YP_882121.1 CDS MAV_2935 NC_008595.1 2973326 2974204 D identified by match to protein family HMM PF00296; hypothetical protein 2973326..2974204 Mycobacterium avium 104 4526882 YP_882122.1 CDS MAV_2936 NC_008595.1 2974201 2974671 D hypothetical protein 2974201..2974671 Mycobacterium avium 104 4529413 YP_882123.1 CDS MAV_2937 NC_008595.1 2975018 2976760 D identified by match to protein family HMM PF00174; oxidoreductase molybdopterin binding subunit 2975018..2976760 Mycobacterium avium 104 4526670 YP_882124.1 CDS MAV_2939 NC_008595.1 2976888 2977163 D hypothetical protein 2976888..2977163 Mycobacterium avium 104 4526863 YP_882125.1 CDS MAV_2938 NC_008595.1 2977144 2977584 R hypothetical protein complement(2977144..2977584) Mycobacterium avium 104 4529590 YP_882126.1 CDS MAV_2940 NC_008595.1 2977673 2978233 R hypothetical protein complement(2977673..2978233) Mycobacterium avium 104 4527318 YP_882127.1 CDS MAV_2941 NC_008595.1 2978253 2978474 R hypothetical protein complement(2978253..2978474) Mycobacterium avium 104 4526554 YP_882128.1 CDS MAV_2942 NC_008595.1 2978517 2980313 D hypothetical protein 2978517..2980313 Mycobacterium avium 104 4528560 YP_882129.1 CDS MAV_2943 NC_008595.1 2980345 2980551 R hypothetical protein complement(2980345..2980551) Mycobacterium avium 104 4530311 YP_882130.1 CDS MAV_2944 NC_008595.1 2980548 2980835 R identified by match to protein family HMM PF03861; ANTAR domain-containing protein complement(2980548..2980835) Mycobacterium avium 104 4527062 YP_882131.1 CDS MAV_2945 NC_008595.1 2981123 2982322 R identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F complement(2981123..2982322) Mycobacterium avium 104 4529440 YP_882132.1 CDS MAV_2946 NC_008595.1 2982618 2983490 D identified by match to protein family HMM PF00106; carveol dehydrogenase 2982618..2983490 Mycobacterium avium 104 4528107 YP_882133.1 CDS MAV_2947 NC_008595.1 2983495 2984487 D identified by match to protein family HMM PF00676; dehydrogenase E1 component superfamily protein 2983495..2984487 Mycobacterium avium 104 4526501 YP_882134.1 CDS MAV_2948 NC_008595.1 2984499 2985509 D identified by match to protein family HMM PF02779; match to protein family HMM PF02780; acetoin:2,6-dichlorophenolindophenol oxidoreductase beta subunit 2984499..2985509 Mycobacterium avium 104 4529101 YP_882135.1 CDS MAV_2949 NC_008595.1 2985502 2985738 D identified by match to protein family HMM PF00364; dihydrolipoamide acetyltransferase 2985502..2985738 Mycobacterium avium 104 4528938 YP_882136.1 CDS MAV_2950 NC_008595.1 2985790 2986662 D identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 2985790..2986662 Mycobacterium avium 104 4530198 YP_882137.1 CDS MAV_2951 NC_008595.1 2986672 2988195 D identified by match to protein family HMM PF00501; acyl-CoA synthase 2986672..2988195 Mycobacterium avium 104 4526962 YP_882138.1 CDS MAV_2952 NC_008595.1 2988247 2989599 D identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein 2988247..2989599 Mycobacterium avium 104 4528916 YP_882139.1 CDS MAV_2953 NC_008595.1 2989602 2991341 D initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; 3-ketosteroid-delta-1-dehydrogenase 2989602..2991341 Mycobacterium avium 104 4529557 YP_882140.1 CDS MAV_2954 NC_008595.1 2991374 2992279 R identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase complement(2991374..2992279) Mycobacterium avium 104 4528269 YP_882141.1 CDS MAV_2955 NC_008595.1 2992335 2992586 R hypothetical protein complement(2992335..2992586) Mycobacterium avium 104 4529314 YP_882142.1 CDS MAV_2956 NC_008595.1 2992593 2993960 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent RNA helicase 2992593..2993960 Mycobacterium avium 104 4526843 YP_882143.1 CDS MAV_2957 NC_008595.1 2993969 2994544 R identified by match to protein family HMM PF05724; thiopurine S-methyltransferase complement(2993969..2994544) Mycobacterium avium 104 4526905 YP_882144.1 CDS MAV_2958 NC_008595.1 2994641 2995246 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2994641..2995246 Mycobacterium avium 104 4527838 YP_882145.1 CDS MAV_2959 NC_008595.1 2995283 2997049 R N-acyl-D-glutamate amidohydrolase complement(2995283..2997049) Mycobacterium avium 104 4530657 YP_882146.1 CDS MAV_2960 NC_008595.1 2997234 2997908 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2997234..2997908 Mycobacterium avium 104 4527138 YP_882147.1 CDS MAV_2961 NC_008595.1 2998113 2998760 D identified by match to protein family HMM PF01083; cutinase Cut3 2998113..2998760 Mycobacterium avium 104 4528558 YP_882148.1 CDS MAV_2962 NC_008595.1 2998794 2999693 R identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase complement(2998794..2999693) Mycobacterium avium 104 4528399 YP_882149.1 CDS MAV_2963 NC_008595.1 3000423 3001232 D Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is a general stress response regulator; expressed in stationary phase and under nitrogen depletion and cold shock; RNA polymerase sigma factor SigF 3000423..3001232 Mycobacterium avium 104 4528493 YP_882150.1 CDS MAV_2964 NC_008595.1 3001377 3001994 D hypothetical protein 3001377..3001994 Mycobacterium avium 104 4525631 YP_882151.1 CDS MAV_2965 NC_008595.1 3002020 3002511 D hypothetical protein 3002020..3002511 Mycobacterium avium 104 4528256 YP_882152.1 CDS MAV_2966 NC_008595.1 3002523 3002999 R identified by match to protein family HMM TIGR00026; hypothetical protein complement(3002523..3002999) Mycobacterium avium 104 4527723 YP_882153.1 CDS MAV_2967 NC_008595.1 3003184 3003918 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3003184..3003918 Mycobacterium avium 104 4530233 YP_882154.1 CDS MAV_2968 NC_008595.1 3003915 3005144 D identified by match to protein family HMM PF00067; cytochrome P450-SU2 3003915..3005144 Mycobacterium avium 104 4528492 YP_882155.1 CDS MAV_2969 NC_008595.1 3005141 3006085 D identified by match to protein family HMM PF00106; short chain dehydrogenase 3005141..3006085 Mycobacterium avium 104 4528094 YP_882156.1 CDS MAV_2970 NC_008595.1 3006156 3007385 D identified by match to protein family HMM PF00557; peptidase, M24 family protein 3006156..3007385 Mycobacterium avium 104 4526521 YP_882157.1 CDS MAV_2971 NC_008595.1 3007375 3008505 D identified by match to protein family HMM PF00557; peptidase, M24 family protein 3007375..3008505 Mycobacterium avium 104 4529920 YP_882158.1 CDS MAV_2972 NC_008595.1 3008581 3009012 D REPhypothetical protein 3008581..3009012 Mycobacterium avium 104 4529767 YP_882159.1 CDS MAV_2974 NC_008595.1 3009094 3010038 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 3009094..3010038 Mycobacterium avium 104 4527791 YP_882160.1 CDS MAV_2973 NC_008595.1 3009975 3011249 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(3009975..3011249) Mycobacterium avium 104 4528230 YP_882161.1 CDS MAV_2975 NC_008595.1 3011335 3011787 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 3011335..3011787 Mycobacterium avium 104 4530715 YP_882162.1 CDS MAV_2976 NC_008595.1 3011899 3013173 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 3011899..3013173 Mycobacterium avium 104 4530161 YP_882163.1 CDS MAV_2977 NC_008595.1 3013233 3014222 D identified by match to protein family HMM PF02720; hypothetical protein 3013233..3014222 Mycobacterium avium 104 4529338 YP_882164.1 CDS MAV_2978 NC_008595.1 3014264 3014446 R identified by match to protein family HMM PF05901; Excalibur domain-containing protein complement(3014264..3014446) Mycobacterium avium 104 4527097 YP_882165.1 CDS MAV_2979 NC_008595.1 3014560 3015831 R hypothetical protein complement(3014560..3015831) Mycobacterium avium 104 4529032 YP_882166.1 CDS MAV_2980 NC_008595.1 3015851 3016612 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; clavaldehyde dehydrogenase complement(3015851..3016612) Mycobacterium avium 104 4530286 YP_882167.1 CDS MAV_2981 NC_008595.1 3016609 3018981 R identified by match to protein family HMM PF02515; caib/baif family protein complement(3016609..3018981) Mycobacterium avium 104 4529260 YP_882168.1 CDS MAV_2982 NC_008595.1 3019001 3019969 R identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase complement(3019001..3019969) Mycobacterium avium 104 4528466 YP_882169.1 CDS MAV_2983 NC_008595.1 3020006 3020866 R identified by match to protein family HMM PF00106; carveol dehydrogenase complement(3020006..3020866) Mycobacterium avium 104 4530067 YP_882170.1 CDS MAV_2984 NC_008595.1 3020842 3022044 R identified by match to protein family HMM PF00067; cytochrome P450 complement(3020842..3022044) Mycobacterium avium 104 4529516 YP_882171.1 CDS MAV_2985 NC_008595.1 3022268 3022942 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(3022268..3022942) Mycobacterium avium 104 4530181 YP_882172.1 CDS MAV_2986 NC_008595.1 3023077 3023685 D protein export protein SecD, putative 3023077..3023685 Mycobacterium avium 104 4529643 YP_882173.1 CDS MAV_2987 NC_008595.1 3023720 3024730 R identified by match to protein family HMM PF01118; match to protein family HMM PF01408; match to protein family HMM PF02894; NAD binding oxidoreductase complement(3023720..3024730) Mycobacterium avium 104 4528188 YP_882174.1 CDS MAV_2988 NC_008595.1 3024864 3025529 D identified by match to protein family HMM PF01209; ubiquinone/menaquinone biosynthesis methyltransferases 3024864..3025529 Mycobacterium avium 104 4526295 YP_882175.1 CDS MAV_2989 NC_008595.1 3025550 3027151 R identified by match to protein family HMM PF00884; arylsulfatase complement(3025550..3027151) Mycobacterium avium 104 4529227 YP_882176.1 CDS MAV_2990 NC_008595.1 3027258 3028277 D identified by match to protein family HMM PF03060; oxidoreductase 3027258..3028277 Mycobacterium avium 104 4530454 YP_882177.1 CDS MAV_2991 NC_008595.1 3028282 3029103 R identified by match to protein family HMM PF02409; tetracenomycin polyketide synthesis O-methyltransferase TcmP complement(3028282..3029103) Mycobacterium avium 104 4528683 YP_882178.1 CDS MAV_2992 NC_008595.1 3029100 3029627 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(3029100..3029627) Mycobacterium avium 104 4526866 YP_882179.1 CDS MAV_2993 NC_008595.1 3029718 3030986 R identified by match to protein family HMM PF04909; amidohydrolase complement(3029718..3030986) Mycobacterium avium 104 4528299 YP_882180.1 CDS MAV_2994 NC_008595.1 3031117 3031890 R identified by match to protein family HMM PF00596; class II aldolase complement(3031117..3031890) Mycobacterium avium 104 4527779 YP_882181.1 CDS MAV_2995 NC_008595.1 3031877 3033505 R identified by match to protein family HMM PF00501; adenylate-forming enzyme complement(3031877..3033505) Mycobacterium avium 104 4526811 YP_882182.1 CDS MAV_2996 NC_008595.1 3033569 3034087 R lipoprotein complement(3033569..3034087) Mycobacterium avium 104 4525673 YP_882183.1 CDS MAV_2997 NC_008595.1 3034080 3035357 R identified by match to protein family HMM PF00174; oxidoreductase, molybdopterin binding complement(3034080..3035357) Mycobacterium avium 104 4528226 YP_882184.1 CDS MAV_2998 NC_008595.1 3035367 3035483 D hypothetical protein 3035367..3035483 Mycobacterium avium 104 4529139 YP_882185.1 CDS MAV_2999 NC_008595.1 3035583 3036980 D identified by match to protein family HMM PF02720; hypothetical protein 3035583..3036980 Mycobacterium avium 104 4525810 YP_882186.1 CDS MAV_3000 NC_008595.1 3036983 3038602 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(3036983..3038602) Mycobacterium avium 104 4530709 YP_882187.1 CDS MAV_3001 NC_008595.1 3038599 3040194 R identified by match to protein family HMM PF01266; match to protein family HMM PF07992; steroid monooxygenase complement(3038599..3040194) Mycobacterium avium 104 4530168 YP_882188.1 CDS MAV_3002 NC_008595.1 3040191 3040364 R hypothetical protein complement(3040191..3040364) Mycobacterium avium 104 4528763 YP_882189.1 CDS MAV_3003 NC_008595.1 3040361 3040762 R identified by match to protein family HMM PF01796; acyl dehydratase complement(3040361..3040762) Mycobacterium avium 104 4527855 YP_882190.1 CDS MAV_3004 NC_008595.1 3040765 3041967 R nonspecific lipid-transfer protein complement(3040765..3041967) Mycobacterium avium 104 4527713 YP_882191.1 CDS MAV_3005 NC_008595.1 3041964 3042401 R identified by match to protein family HMM PF01575; MaoC like domain-containing protein complement(3041964..3042401) Mycobacterium avium 104 4526190 YP_882192.1 CDS MAV_3006 NC_008595.1 3042428 3042913 R hypothetical protein complement(3042428..3042913) Mycobacterium avium 104 4530144 YP_882193.1 CDS MAV_3007 NC_008595.1 3042921 3044057 R identified by match to protein family HMM PF00441; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain-containing protein complement(3042921..3044057) Mycobacterium avium 104 4526842 YP_882194.1 CDS MAV_3008 NC_008595.1 3044077 3045255 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; acyl-CoA dehydrogenase complement(3044077..3045255) Mycobacterium avium 104 4529696 YP_882195.1 CDS MAV_3009 NC_008595.1 3045571 3045735 D hypothetical protein 3045571..3045735 Mycobacterium avium 104 4525917 YP_882196.1 CDS MAV_3010 NC_008595.1 3045740 3048328 R identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061; ABC transporter ATP-binding protein complement(3045740..3048328) Mycobacterium avium 104 4530477 YP_882197.1 CDS MAV_3011 NC_008595.1 3048527 3049528 R identified by match to protein family HMM PF07859; alpha/beta hydrolase complement(3048527..3049528) Mycobacterium avium 104 4530571 YP_882198.1 CDS MAV_3012 NC_008595.1 3049775 3050620 D identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase SDR 3049775..3050620 Mycobacterium avium 104 4528969 YP_882199.1 CDS MAV_3013 NC_008595.1 3050718 3050951 R hypothetical protein complement(3050718..3050951) Mycobacterium avium 104 4526283 YP_882200.1 CDS MAV_3014 NC_008595.1 3051200 3051634 D hypothetical protein 3051200..3051634 Mycobacterium avium 104 4529073 YP_882201.1 CDS MAV_3015 NC_008595.1 3051857 3053218 D identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; acyltransferase, ws/dgat/mgat subfamily protein 3051857..3053218 Mycobacterium avium 104 4527262 YP_882202.1 CDS MAV_3016 NC_008595.1 3053286 3054179 D identified by match to protein family HMM PF00561; 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase 3053286..3054179 Mycobacterium avium 104 4530658 YP_882203.1 CDS MAV_3017 NC_008595.1 3054231 3055034 R identified by match to protein family HMM PF00106; carveol dehydrogenase complement(3054231..3055034) Mycobacterium avium 104 4530487 YP_882204.1 CDS MAV_3018 NC_008595.1 3055211 3056836 D identified by match to protein family HMM PF01266; match to protein family HMM PF05834; match to protein family HMM PF07992; steroid monooxygenase 3055211..3056836 Mycobacterium avium 104 4526171 YP_882205.1 CDS MAV_3019 NC_008595.1 3056836 3057642 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; carveol dehydrogenase 3056836..3057642 Mycobacterium avium 104 4529993 YP_882206.1 CDS MAV_3020 NC_008595.1 3057769 3058953 D identified by match to protein family HMM PF08028; pigment production hydroxylase 3057769..3058953 Mycobacterium avium 104 4530577 YP_882207.1 CDS MAV_3021 NC_008595.1 3058964 3059872 D identified by match to protein family HMM PF00903; biphenyl-2,3-diol 1,2-dioxygenase 1 3058964..3059872 Mycobacterium avium 104 4527922 YP_882208.1 CDS MAV_3022 NC_008595.1 3059869 3061344 D identified by match to protein family HMM PF00890; match to protein family HMM PF01266; hypothetical protein 3059869..3061344 Mycobacterium avium 104 4529135 YP_882209.1 CDS MAV_3023 NC_008595.1 3061323 3061460 D hypothetical protein 3061323..3061460 Mycobacterium avium 104 4525541 YP_882210.1 CDS MAV_3024 NC_008595.1 3061487 3062323 D identified by match to protein family HMM PF01614; IclR family transcriptional regulator 3061487..3062323 Mycobacterium avium 104 4530237 YP_882211.1 CDS MAV_3025 NC_008595.1 3062320 3063243 D identified by match to protein family HMM PF07859; esterase 3062320..3063243 Mycobacterium avium 104 4528520 YP_882212.1 CDS MAV_3026 NC_008595.1 3063329 3063685 D hypothetical protein 3063329..3063685 Mycobacterium avium 104 4529054 YP_882213.1 CDS MAV_3028 NC_008595.1 3063678 3064304 D identified by match to protein family HMM PF07876; stress responsive A/B barrel domain family protein 3063678..3064304 Mycobacterium avium 104 4530423 YP_882214.1 CDS MAV_3027 NC_008595.1 3064301 3065188 R identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase SDR complement(3064301..3065188) Mycobacterium avium 104 4528019 YP_882215.1 CDS MAV_3029 NC_008595.1 3065185 3067113 R hypothetical protein complement(3065185..3067113) Mycobacterium avium 104 4526677 YP_882216.1 CDS MAV_3030 NC_008595.1 3067333 3067812 D hypothetical protein 3067333..3067812 Mycobacterium avium 104 4530211 YP_882217.1 CDS MAV_3031 NC_008595.1 3067851 3068684 D identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 3067851..3068684 Mycobacterium avium 104 4526143 YP_882218.1 CDS MAV_3032 NC_008595.1 3068691 3069674 D identified by match to protein family HMM PF07859; alpha/beta hydrolase 3068691..3069674 Mycobacterium avium 104 4529062 YP_882219.1 CDS MAV_3033 NC_008595.1 3069719 3070795 D hypothetical protein 3069719..3070795 Mycobacterium avium 104 4527741 YP_882220.1 CDS MAV_3034 NC_008595.1 3070816 3071598 D identified by match to protein family HMM PF00106; match to protein family HMM PF07993; oxidoreductase 3070816..3071598 Mycobacterium avium 104 4526638 YP_882221.1 CDS MAV_3035 NC_008595.1 3071705 3072493 R identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase SDR complement(3071705..3072493) Mycobacterium avium 104 4526571 YP_882222.1 CDS MAV_3036 NC_008595.1 3072526 3072795 R hypothetical protein complement(3072526..3072795) Mycobacterium avium 104 4529504 YP_882223.1 CDS MAV_3037 NC_008595.1 3072813 3073925 R identified by match to protein family HMM PF00355; oxygenase KshA complement(3072813..3073925) Mycobacterium avium 104 4528696 YP_882224.1 CDS MAV_3038 NC_008595.1 3073996 3075321 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(3073996..3075321) Mycobacterium avium 104 4528932 YP_882225.1 CDS MAV_3039 NC_008595.1 3075452 3077197 D initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; 3-ketosteroid-delta-1-dehydrogenase 3075452..3077197 Mycobacterium avium 104 4529543 YP_882226.1 CDS MAV_3040 NC_008595.1 3077414 3077716 R hypothetical protein complement(3077414..3077716) Mycobacterium avium 104 4530373 YP_882227.1 CDS MAV_3041 NC_008595.1 3077738 3077941 D hypothetical protein 3077738..3077941 Mycobacterium avium 104 4527685 YP_882228.1 CDS MAV_3042 NC_008595.1 3078143 3078904 D hypothetical protein 3078143..3078904 Mycobacterium avium 104 4529272 YP_882229.1 CDS MAV_3043 NC_008595.1 3079057 3080400 R identified by match to protein family HMM PF02720; hypothetical protein complement(3079057..3080400) Mycobacterium avium 104 4528097 YP_882230.1 CDS MAV_3044 NC_008595.1 3080533 3081213 R identified by match to protein family HMM PF03551; PadR family transcriptional regulator complement(3080533..3081213) Mycobacterium avium 104 4529903 YP_882231.1 CDS MAV_3045 NC_008595.1 3081275 3082195 D identified by match to protein family HMM PF00296; hypothetical protein 3081275..3082195 Mycobacterium avium 104 4527746 YP_882232.1 CDS MAV_3046 NC_008595.1 3082197 3083072 R hypothetical protein complement(3082197..3083072) Mycobacterium avium 104 4527431 YP_882233.1 CDS MAV_3047 NC_008595.1 3083139 3084290 D identified by match to protein family HMM PF07992; pyridine nucleotide-disulphide oxidoreductase, putative 3083139..3084290 Mycobacterium avium 104 4527268 YP_882234.1 CDS MAV_3048 NC_008595.1 3084317 3085765 R identified by similarity to GB:AAD24211.1; match to protein family HMM PF00394; match to protein family HMM PF07731; match to protein family HMM PF07732; multicopper oxidase complement(3084317..3085765) Mycobacterium avium 104 4528925 YP_882235.1 CDS MAV_3049 NC_008595.1 3085995 3086492 D identified by match to protein family HMM PF01613; oxidoreductase 3085995..3086492 Mycobacterium avium 104 4530488 YP_882236.1 CDS MAV_3050 NC_008595.1 3086495 3087205 D identified by match to protein family HMM PF01872; hypothetical protein 3086495..3087205 Mycobacterium avium 104 4526250 YP_882237.1 CDS MAV_3051 NC_008595.1 3087245 3087712 D hypothetical protein 3087245..3087712 Mycobacterium avium 104 4527155 YP_882238.1 CDS MAV_3053 NC_008595.1 3088386 3089876 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; sugar ABC transporter complement(3088386..3089876) Mycobacterium avium 104 4529156 YP_882239.1 CDS MAV_3054 NC_008595.1 3089880 3091673 R identified by match to protein family HMM PF00583; match to protein family HMM TIGR03103; GNAT family acetyltransferase complement(3089880..3091673) Mycobacterium avium 104 4529221 YP_882240.1 CDS asnB NC_008595.1 3091670 3093409 R identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536; match to protein family HMM TIGR03104; asparagine synthase (glutamine-hydrolyzing) complement(3091670..3093409) Mycobacterium avium 104 4528484 YP_882241.1 CDS MAV_3056 NC_008595.1 3093635 3124900 R identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM PF05175; match to protein family HMM PF05401; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; linear gramicidin synthetase subunit D complement(3093635..3124900) Mycobacterium avium 104 4528144 YP_882242.1 CDS MAV_3057 NC_008595.1 3124957 3125175 R identified by match to protein family HMM PF03621; hypothetical protein complement(3124957..3125175) Mycobacterium avium 104 4529307 YP_882243.1 CDS MAV_3058 NC_008595.1 3125251 3125496 D hypothetical protein 3125251..3125496 Mycobacterium avium 104 4526013 YP_882244.1 CDS MAV_3059 NC_008595.1 3126302 3127087 D hypothetical protein 3126302..3127087 Mycobacterium avium 104 4525675 YP_882245.1 CDS MAV_3060 NC_008595.1 3127203 3127637 D hypothetical protein 3127203..3127637 Mycobacterium avium 104 4529493 YP_882246.1 CDS MAV_3061 NC_008595.1 3127686 3128351 D hypothetical protein 3127686..3128351 Mycobacterium avium 104 4526383 YP_882247.1 CDS engA NC_008595.1 3128638 3130038 R synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(3128638..3130038) Mycobacterium avium 104 4530197 YP_882248.1 CDS cmk NC_008595.1 3130035 3130721 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(3130035..3130721) Mycobacterium avium 104 4527937 YP_882249.1 CDS MAV_3065 NC_008595.1 3130718 3131464 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase B complement(3130718..3131464) Mycobacterium avium 104 4525814 YP_882250.1 CDS scpB NC_008595.1 3131461 3132168 R identified by match to protein family HMM PF04079; match to protein family HMM TIGR00281; segregation and condensation protein B complement(3131461..3132168) Mycobacterium avium 104 4529047 YP_882251.1 CDS scpA NC_008595.1 3132165 3132983 R identified by match to protein family HMM PF02616; segregation and condensation protein A complement(3132165..3132983) Mycobacterium avium 104 4527731 YP_882252.1 CDS soj NC_008595.1 3132980 3133843 R identified by match to protein family HMM PF01656; SpoOJ regulator protein complement(3132980..3133843) Mycobacterium avium 104 4528747 YP_882253.1 CDS MAV_3069 NC_008595.1 3134081 3134833 D identified by match to protein family HMM PF01596; catechol-O-methyltransferase 3134081..3134833 Mycobacterium avium 104 4527472 YP_882254.1 CDS xerD NC_008595.1 3134859 3135800 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD complement(3134859..3135800) Mycobacterium avium 104 4528381 YP_882255.1 CDS MAV_3071 NC_008595.1 3135797 3136420 R identified by match to protein family HMM PF00293; MutT/nudix family protein complement(3135797..3136420) Mycobacterium avium 104 4527219 YP_882256.1 CDS pyrG NC_008595.1 3136413 3138164 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(3136413..3138164) Mycobacterium avium 104 4525572 YP_882257.1 CDS MAV_3073 NC_008595.1 3138287 3139240 R hypothetical protein complement(3138287..3139240) Mycobacterium avium 104 4528645 YP_882258.1 CDS MAV_3074 NC_008595.1 3139241 3140422 R hypothetical protein complement(3139241..3140422) Mycobacterium avium 104 4526590 YP_882259.1 CDS recN NC_008595.1 3140607 3142376 R identified by match to protein family HMM PF02463; match to protein family HMM TIGR00634; DNA repair protein RecN complement(3140607..3142376) Mycobacterium avium 104 4527607 YP_882260.1 CDS ppnK NC_008595.1 3142402 3143328 R catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase complement(3142402..3143328) Mycobacterium avium 104 4525869 YP_882261.1 CDS MAV_3077 NC_008595.1 3143325 3144134 R identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478; hemolysin A complement(3143325..3144134) Mycobacterium avium 104 4526016 YP_882262.1 CDS MAV_3078 NC_008595.1 3144143 3144328 R hypothetical protein complement(3144143..3144328) Mycobacterium avium 104 4526503 YP_882263.1 CDS MAV_3079 NC_008595.1 3144352 3145374 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460; HAD-superfamily protein hydrolase, subfamily protein IIA complement(3144352..3145374) Mycobacterium avium 104 4528420 YP_882264.1 CDS MAV_3080 NC_008595.1 3145376 3146011 R TPR repeat-containing protein complement(3145376..3146011) Mycobacterium avium 104 4530430 YP_882265.1 CDS MAV_3081 NC_008595.1 3146199 3146567 R identified by match to protein family HMM PF05305; LprJ protein complement(3146199..3146567) Mycobacterium avium 104 4530457 YP_882266.1 CDS tyrS NC_008595.1 3146659 3147924 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(3146659..3147924) Mycobacterium avium 104 4528211 YP_882267.1 CDS MAV_3083 NC_008595.1 3147936 3148574 R responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase complement(3147936..3148574) Mycobacterium avium 104 4528366 YP_882268.1 CDS amt NC_008595.1 3148659 3149936 D identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836; ammonium transporter 3148659..3149936 Mycobacterium avium 104 4528862 YP_882269.1 CDS MAV_3085 NC_008595.1 3150048 3150809 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3150048..3150809 Mycobacterium avium 104 4527813 YP_882270.1 CDS MAV_3086 NC_008595.1 3150875 3151561 D identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025; efflux ABC transporter 3150875..3151561 Mycobacterium avium 104 4530110 YP_882271.1 CDS MAV_3088 NC_008595.1 3151580 3152203 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3151580..3152203 Mycobacterium avium 104 4528134 YP_882272.1 CDS MAV_3087 NC_008595.1 3152169 3152384 R identified by match to protein family HMM PF03966; hypothetical protein complement(3152169..3152384) Mycobacterium avium 104 4529953 YP_882273.1 CDS MAV_3089 NC_008595.1 3152381 3155377 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(3152381..3155377) Mycobacterium avium 104 4528647 YP_882274.1 CDS MAV_3090 NC_008595.1 3155678 3155959 R hypothetical protein complement(3155678..3155959) Mycobacterium avium 104 4526023 YP_882275.1 CDS MAV_3091 NC_008595.1 3156425 3156925 D hypothetical protein 3156425..3156925 Mycobacterium avium 104 4526347 YP_882276.1 CDS MAV_3092 NC_008595.1 3156933 3157679 D hypothetical protein 3156933..3157679 Mycobacterium avium 104 4530183 YP_882277.1 CDS MAV_3093 NC_008595.1 3157755 3159377 D identified by match to protein family HMM PF00732; match to protein family HMM PF05199; glucose-methanol-choline oxidoreductase 3157755..3159377 Mycobacterium avium 104 4527139 YP_882278.1 CDS MAV_3094 NC_008595.1 3159370 3161166 D identified by match to protein family HMM PF00723; glycosyl hydrolase, family protein 15 3159370..3161166 Mycobacterium avium 104 4527144 YP_882279.1 CDS MAV_3095 NC_008595.1 3161197 3162219 D identified by match to protein family HMM PF00106; short chain dehydrogenase 3161197..3162219 Mycobacterium avium 104 4526879 YP_882280.1 CDS MAV_3096 NC_008595.1 3162216 3163322 D identified by match to protein family HMM PF01188; match to protein family HMM PF02746; mandelate racemase/muconate lactonizing enzyme 3162216..3163322 Mycobacterium avium 104 4528028 YP_882281.1 CDS MAV_3097 NC_008595.1 3163424 3164194 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; NAD dependent epimerase/dehydratase complement(3163424..3164194) Mycobacterium avium 104 4528555 YP_882282.1 CDS MAV_3098 NC_008595.1 3164210 3165022 R identified by match to protein family HMM PF00106; carveol dehydrogenase complement(3164210..3165022) Mycobacterium avium 104 4530666 YP_882283.1 CDS MAV_3099 NC_008595.1 3165029 3166006 R hypothetical protein complement(3165029..3166006) Mycobacterium avium 104 4528595 YP_882284.1 CDS MAV_3100 NC_008595.1 3166101 3167237 R sulfotransferase complement(3166101..3167237) Mycobacterium avium 104 4529984 YP_882285.1 CDS MAV_3101 NC_008595.1 3167242 3168084 R identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase complement(3167242..3168084) Mycobacterium avium 104 4528734 YP_882286.1 CDS MAV_3102 NC_008595.1 3168286 3169239 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 3168286..3169239 Mycobacterium avium 104 4527889 YP_882287.1 CDS MAV_3103 NC_008595.1 3169432 3170121 D identified by match to protein family HMM PF03861; match to protein family HMM TIGR00229; hypothetical protein 3169432..3170121 Mycobacterium avium 104 4525667 YP_882288.1 CDS MAV_3104 NC_008595.1 3170364 3172088 D identified by match to protein family HMM PF00005; macrolide ABC transporter ATP-binding protein 3170364..3172088 Mycobacterium avium 104 4525868 YP_882289.1 CDS MAV_3106 NC_008595.1 3172094 3173377 D identified by match to protein family HMM PF00067; P450 heme-thiolate protein 3172094..3173377 Mycobacterium avium 104 4529140 YP_882290.1 CDS MAV_3105 NC_008595.1 3173360 3174421 R identified by match to protein family HMM PF00195; match to protein family HMM PF02797; Pks11 protein complement(3173360..3174421) Mycobacterium avium 104 4530057 YP_882291.1 CDS MAV_3107 NC_008595.1 3174582 3177686 R identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; polyketide synthase complement(3174582..3177686) Mycobacterium avium 104 4530112 YP_882292.1 CDS MAV_3108 NC_008595.1 3177689 3184075 R identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801; erythronolide synthase, modules 3 and 4 complement(3177689..3184075) Mycobacterium avium 104 4528620 YP_882293.1 CDS MAV_3109 NC_008595.1 3184095 3190469 R identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; RifB protein complement(3184095..3190469) Mycobacterium avium 104 4528031 YP_882294.1 CDS MAV_3110 NC_008595.1 3190529 3191590 R identified by match to protein family HMM PF00195; match to protein family HMM PF02797; Pks10 protein complement(3190529..3191590) Mycobacterium avium 104 4528431 YP_882295.1 CDS argH NC_008595.1 3191699 3193117 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(3191699..3193117) Mycobacterium avium 104 4525648 YP_882296.1 CDS argG NC_008595.1 3193152 3194348 R catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase complement(3193152..3194348) Mycobacterium avium 104 4528930 YP_882297.1 CDS argR NC_008595.1 3194376 3194870 R regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor complement(3194376..3194870) Mycobacterium avium 104 4530493 YP_882298.1 CDS argF NC_008595.1 3194867 3195796 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(3194867..3195796) Mycobacterium avium 104 4530101 YP_882299.1 CDS argD NC_008595.1 3195793 3197022 R catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase complement(3195793..3197022) Mycobacterium avium 104 4529016 YP_882300.1 CDS argB NC_008595.1 3197117 3198004 R catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase complement(3197117..3198004) Mycobacterium avium 104 4528127 YP_882301.1 CDS argJ NC_008595.1 3198001 3199215 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein complement(3198001..3199215) Mycobacterium avium 104 4528655 YP_882302.1 CDS argC NC_008595.1 3199212 3200255 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase complement(3199212..3200255) Mycobacterium avium 104 4530259 YP_882303.1 CDS pheT NC_008595.1 3200303 3202789 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(3200303..3202789) Mycobacterium avium 104 4526877 YP_882304.1 CDS pheS NC_008595.1 3202789 3203817 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(3202789..3203817) Mycobacterium avium 104 4528998 YP_882305.1 CDS MAV_3121 NC_008595.1 3204028 3204831 R hypothetical protein complement(3204028..3204831) Mycobacterium avium 104 4529222 YP_882306.1 CDS MAV_3122 NC_008595.1 3204856 3205776 R identified by match to protein family HMM PF00211; adenylate and guanylate cyclase catalytic domain-containing protein complement(3204856..3205776) Mycobacterium avium 104 4526930 YP_882307.1 CDS MAV_3124 NC_008595.1 3205992 3207059 D hypothetical protein 3205992..3207059 Mycobacterium avium 104 4529113 YP_882308.1 CDS MAV_3123 NC_008595.1 3207046 3207837 R identified by match to protein family HMM PF00588; match to protein family HMM PF08032; TsnR protein complement(3207046..3207837) Mycobacterium avium 104 4526902 YP_882309.1 CDS rplT NC_008595.1 3207868 3208254 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(3207868..3208254) Mycobacterium avium 104 4530551 YP_882310.1 CDS rpmI NC_008595.1 3208345 3208539 R identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 complement(3208345..3208539) Mycobacterium avium 104 4526875 YP_882311.1 CDS infC NC_008595.1 3208582 3209103 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(3208582..3209103) Mycobacterium avium 104 4530256 YP_882312.1 CDS lysS NC_008595.1 3209782 3213009 D catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase 3209782..3213009 Mycobacterium avium 104 4530299 YP_882313.1 CDS MAV_3129 NC_008595.1 3213169 3214572 D identified by match to protein family HMM PF00756; esterase 3213169..3214572 Mycobacterium avium 104 4525808 YP_882314.1 CDS MAV_3130 NC_008595.1 3214754 3215323 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3214754..3215323 Mycobacterium avium 104 4529455 YP_882315.1 CDS MAV_3131 NC_008595.1 3215464 3217575 D identified by match to protein family HMM PF00899; hypothetical protein 3215464..3217575 Mycobacterium avium 104 4528770 YP_882316.1 CDS MAV_3132 NC_008595.1 3217685 3219550 D identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254; GGDEF domain-containing protein 3217685..3219550 Mycobacterium avium 104 4527237 YP_882317.1 CDS MAV_3133 NC_008595.1 3219569 3220288 R hypothetical protein complement(3219569..3220288) Mycobacterium avium 104 4528561 YP_882318.1 CDS MAV_3134 NC_008595.1 3220663 3220899 D hypothetical protein 3220663..3220899 Mycobacterium avium 104 4529330 YP_882319.1 CDS uvrA NC_008595.1 3220901 3223816 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(3220901..3223816) Mycobacterium avium 104 4528878 YP_882320.1 CDS MAV_3136 NC_008595.1 3223915 3224610 D identified by match to protein family HMM PF00753; hydrolase 3223915..3224610 Mycobacterium avium 104 4527610 YP_882321.1 CDS MAV_3137 NC_008595.1 3224628 3225020 R identified by match to protein family HMM PF00582; universal stress protein family protein, putative complement(3224628..3225020) Mycobacterium avium 104 4530366 YP_882322.1 CDS MAV_3138 NC_008595.1 3225444 3226940 D hypothetical protein 3225444..3226940 Mycobacterium avium 104 4529965 YP_882323.1 CDS MAV_3139 NC_008595.1 3226993 3227715 D identified by match to protein family HMM PF02308; Mg2+ transporter-C (MgtC) family protein 3226993..3227715 Mycobacterium avium 104 4526130 YP_882324.1 CDS MAV_3140 NC_008595.1 3227718 3229136 R identified by match to protein family HMM PF07690; drug efflux membrane protein complement(3227718..3229136) Mycobacterium avium 104 4530007 YP_882325.1 CDS uvrB NC_008595.1 3229194 3231362 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(3229194..3231362) Mycobacterium avium 104 4526839 YP_882326.1 CDS MAV_3142 NC_008595.1 3231456 3231962 R hypothetical protein complement(3231456..3231962) Mycobacterium avium 104 4527227 YP_882327.1 CDS MAV_3143 NC_008595.1 3231946 3233007 R hypothetical protein complement(3231946..3233007) Mycobacterium avium 104 4530108 YP_882328.1 CDS MAV_3144 NC_008595.1 3233020 3233289 R hypothetical protein complement(3233020..3233289) Mycobacterium avium 104 4527913 YP_882329.1 CDS MAV_3145 NC_008595.1 3233522 3235597 R identified by match to protein family HMM PF00069; PknF protein complement(3233522..3235597) Mycobacterium avium 104 4527672 YP_882330.1 CDS MAV_3146 NC_008595.1 3235901 3238423 D identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061; ABC transporter ATP-binding protein 3235901..3238423 Mycobacterium avium 104 4529702 YP_882331.1 CDS MAV_3147 NC_008595.1 3238521 3238985 D identified by match to protein family HMM PF04167; hypothetical protein 3238521..3238985 Mycobacterium avium 104 4525653 YP_882332.1 CDS ligD NC_008595.1 3238982 3239980 D identified by match to protein family HMM PF01068; match to protein family HMM PF04679; match to protein family HMM TIGR02779; DNA polymerase LigD ligase subunit 3238982..3239980 Mycobacterium avium 104 4526987 YP_882333.1 CDS MAV_3149 NC_008595.1 3239980 3240768 D identified by match to protein family HMM PF01149; match to protein family HMM PF06831; formamidopyrimidine DNA-glyxosylase 3239980..3240768 Mycobacterium avium 104 4527725 YP_882334.1 CDS MAV_3150 NC_008595.1 3240778 3241191 D hypothetical protein 3240778..3241191 Mycobacterium avium 104 4529013 YP_882335.1 CDS coaE NC_008595.1 3241202 3242425 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; in Mycobacterium tuberculosis the C-terminal UPF0157 domain appears to be necessary for proper folding of the N-terminal domain; dephospho-CoA kinase/protein folding accessory domain-containing protein complement(3241202..3242425) Mycobacterium avium 104 4530119 YP_882336.1 CDS rpsA NC_008595.1 3242438 3243880 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(3242438..3243880) Mycobacterium avium 104 4528860 YP_882337.1 CDS MAV_3153 NC_008595.1 3243984 3245495 R identified by match to protein family HMM PF03055; retinal pigment epithelial membrane protein complement(3243984..3245495) Mycobacterium avium 104 4528117 YP_882338.1 CDS MAV_3154 NC_008595.1 3245528 3246157 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(3245528..3246157) Mycobacterium avium 104 4529211 YP_882339.1 CDS MAV_3155 NC_008595.1 3246170 3248911 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(3246170..3248911) Mycobacterium avium 104 4529024 YP_882340.1 CDS MAV_3156 NC_008595.1 3249019 3249459 D identified by match to protein family HMM PF01796; hypothetical protein 3249019..3249459 Mycobacterium avium 104 4526929 YP_882341.1 CDS MAV_3157 NC_008595.1 3249456 3250670 D lipid-transfer protein 3249456..3250670 Mycobacterium avium 104 4527758 YP_882342.1 CDS MAV_3158 NC_008595.1 3250781 3251404 R identified by match to protein family HMM PF00072; match to protein family HMM PF03861; response regulator complement(3250781..3251404) Mycobacterium avium 104 4529563 YP_882343.1 CDS MAV_3159 NC_008595.1 3251523 3251657 R hypothetical protein complement(3251523..3251657) Mycobacterium avium 104 4529377 YP_882344.1 CDS MAV_3161 NC_008595.1 3252278 3253603 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(3252278..3253603) Mycobacterium avium 104 4526679 YP_882345.1 CDS MAV_3162 NC_008595.1 3253684 3255015 D identified by match to protein family HMM PF00211; adenylate cyclase 3253684..3255015 Mycobacterium avium 104 4530301 YP_882346.1 CDS MAV_3163 NC_008595.1 3255094 3255636 D identified by match to protein family HMM PF03729; integral membrane protein 3255094..3255636 Mycobacterium avium 104 4527730 YP_882347.1 CDS MAV_3164 NC_008595.1 3255723 3257195 D identified by match to protein family HMM PF01654; cytochrome D ubiquinol oxidase subunit 1 3255723..3257195 Mycobacterium avium 104 4528746 YP_882348.1 CDS cydB NC_008595.1 3257229 3258269 D identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203; cytochrome D ubiquinol oxidase, subunit II 3257229..3258269 Mycobacterium avium 104 4530475 YP_882349.1 CDS cydD NC_008595.1 3258332 3259954 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR02857; cysteine ABC transporter ATP-binding protein/permease 3258332..3259954 Mycobacterium avium 104 4529834 YP_882350.1 CDS MAV_3167 NC_008595.1 3259941 3261623 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3259941..3261623 Mycobacterium avium 104 4530576 YP_882351.1 CDS MAV_3168 NC_008595.1 3261630 3263027 R identified by match to protein family HMM PF04329; match to protein family HMM PF04330; match to protein family HMM PF04331; hypothetical protein complement(3261630..3263027) Mycobacterium avium 104 4525527 YP_882352.1 CDS MAV_3169 NC_008595.1 3263169 3264071 R identified by match to protein family HMM PF02551; Acyl-CoA thioesterase complement(3263169..3264071) Mycobacterium avium 104 4526341 YP_882353.1 CDS pyk NC_008595.1 3264144 3265499 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(3264144..3265499) Mycobacterium avium 104 4528981 YP_882354.1 CDS MAV_3171 NC_008595.1 3265629 3265982 R hypothetical protein complement(3265629..3265982) Mycobacterium avium 104 4527996 YP_882355.1 CDS MAV_3172 NC_008595.1 3266090 3267412 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(3266090..3267412) Mycobacterium avium 104 4528045 YP_882356.1 CDS trpA NC_008595.1 3267409 3268224 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(3267409..3268224) Mycobacterium avium 104 4530386 YP_882357.1 CDS trpB NC_008595.1 3268221 3269492 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(3268221..3269492) Mycobacterium avium 104 4529027 YP_882358.1 CDS trpC NC_008595.1 3269564 3270382 R involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase complement(3269564..3270382) Mycobacterium avium 104 4527075 YP_882359.1 CDS MAV_3176 NC_008595.1 3270496 3271176 R identified by match to protein family HMM TIGR02234; hypothetical protein complement(3270496..3271176) Mycobacterium avium 104 4525771 YP_882360.1 CDS trpE NC_008595.1 3271173 3272705 R with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I complement(3271173..3272705) Mycobacterium avium 104 4527500 YP_882361.1 CDS MAV_3178 NC_008595.1 3272878 3273336 D identified by match to protein family HMM PF00578; antioxidant, AhpC/TSA family protein 3272878..3273336 Mycobacterium avium 104 4525692 YP_882362.1 CDS chaA NC_008595.1 3273340 3274446 R identified by match to protein family HMM PF01699; calcium/proton exchanger complement(3273340..3274446) Mycobacterium avium 104 4528203 YP_882363.1 CDS hisI NC_008595.1 3274549 3274896 R PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase complement(3274549..3274896) Mycobacterium avium 104 4530396 YP_882364.1 CDS hisF NC_008595.1 3274893 3275690 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(3274893..3275690) Mycobacterium avium 104 4527724 YP_882365.1 CDS MAV_3182 NC_008595.1 3275692 3276492 R identified by match to protein family HMM PF00459; inositol monophosphatase complement(3275692..3276492) Mycobacterium avium 104 4527378 YP_882366.1 CDS MAV_3183 NC_008595.1 3276499 3277230 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide and the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)anthranilate; involved in histidine and tryptophan biosynthesis; phosphoribosyl isomerase A complement(3276499..3277230) Mycobacterium avium 104 4529891 YP_882367.1 CDS hisH NC_008595.1 3277251 3277871 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(3277251..3277871) Mycobacterium avium 104 4530280 YP_882368.1 CDS hisB NC_008595.1 3277868 3278491 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(3277868..3278491) Mycobacterium avium 104 4529009 YP_882369.1 CDS hisC NC_008595.1 3278488 3279684 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(3278488..3279684) Mycobacterium avium 104 4527733 YP_882370.1 CDS hisD NC_008595.1 3279681 3281084 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(3279681..3281084) Mycobacterium avium 104 4527939 YP_882371.1 CDS MAV_3188 NC_008595.1 3281217 3281630 D identified by match to protein family HMM TIGR00026; hypothetical protein 3281217..3281630 Mycobacterium avium 104 4525718 YP_882372.1 CDS nadC NC_008595.1 3281742 3282596 R catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase complement(3281742..3282596) Mycobacterium avium 104 4526650 YP_882373.1 CDS nadB NC_008595.1 3282599 3284191 R catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase complement(3282599..3284191) Mycobacterium avium 104 4526785 YP_882374.1 CDS nadA NC_008595.1 3284188 3285237 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(3284188..3285237) Mycobacterium avium 104 4527446 YP_882375.1 CDS MAV_3192 NC_008595.1 3285323 3286009 D identified by match to protein family HMM PF00293; hydrolase, NUDIX family protein 3285323..3286009 Mycobacterium avium 104 4527467 YP_882376.1 CDS MAV_3194 NC_008595.1 3286171 3287511 D identified by match to protein family HMM PF03583; secretory lipase 3286171..3287511 Mycobacterium avium 104 4527765 YP_882377.1 CDS MAV_3193 NC_008595.1 3287477 3288154 R hypothetical protein complement(3287477..3288154) Mycobacterium avium 104 4525944 YP_882378.1 CDS MAV_3195 NC_008595.1 3288151 3288387 R hypothetical protein complement(3288151..3288387) Mycobacterium avium 104 4528830 YP_882379.1 CDS bioB NC_008595.1 3288437 3289474 R catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine; biotin synthase complement(3288437..3289474) Mycobacterium avium 104 4528322 YP_882380.1 CDS MAV_3197 NC_008595.1 3289605 3289796 D hypothetical protein 3289605..3289796 Mycobacterium avium 104 4530127 YP_882381.1 CDS MAV_3198 NC_008595.1 3289908 3291740 D hypothetical protein 3289908..3291740 Mycobacterium avium 104 4528512 YP_882382.1 CDS MAV_3199 NC_008595.1 3291744 3292106 D hypothetical protein 3291744..3292106 Mycobacterium avium 104 4529072 YP_882383.1 CDS MAV_3200 NC_008595.1 3292103 3293467 D hypothetical protein 3292103..3293467 Mycobacterium avium 104 4529492 YP_882384.1 CDS MAV_3202 NC_008595.1 3295707 3297128 D identified by match to protein family HMM PF00027; match to protein family HMM PF00924; transmembrane protein 3295707..3297128 Mycobacterium avium 104 4526242 YP_882385.1 CDS MAV_3203 NC_008595.1 3297206 3297715 R hypothetical protein complement(3297206..3297715) Mycobacterium avium 104 4526154 YP_882386.1 CDS bioD NC_008595.1 3297715 3298395 R DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase complement(3297715..3298395) Mycobacterium avium 104 4525725 YP_882387.1 CDS bioF NC_008595.1 3298400 3299545 R catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase complement(3298400..3299545) Mycobacterium avium 104 4526324 YP_882388.1 CDS bioA NC_008595.1 3299550 3300866 R catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine--8-amino-7-oxononanoate transaminase complement(3299550..3300866) Mycobacterium avium 104 4528521 YP_882389.1 CDS MAV_3207 NC_008595.1 3300929 3301396 D hypothetical protein 3300929..3301396 Mycobacterium avium 104 4526607 YP_882390.1 CDS MAV_3208 NC_008595.1 3301728 3302597 D identified by match to protein family HMM PF00877; NlpC/P60 family protein 3301728..3302597 Mycobacterium avium 104 4527632 YP_882391.1 CDS MAV_3209 NC_008595.1 3302697 3304859 D identified by match to protein family HMM PF01757; acyltransferase domain-containing protein 3302697..3304859 Mycobacterium avium 104 4529339 YP_882392.1 CDS glgX NC_008595.1 3304987 3307185 D identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02100; glycogen debranching enzyme GlgX 3304987..3307185 Mycobacterium avium 104 4525823 YP_882393.1 CDS treY NC_008595.1 3307189 3309489 D identified by match to protein family HMM PF00128; match to protein family HMM TIGR02401; malto-oligosyltrehalose synthase 3307189..3309489 Mycobacterium avium 104 4529343 YP_882394.1 CDS treZ NC_008595.1 3309482 3311254 D identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402; malto-oligosyltrehalose trehalohydrolase 3309482..3311254 Mycobacterium avium 104 4528782 YP_882395.1 CDS MAV_3213 NC_008595.1 3311291 3311452 D hypothetical protein 3311291..3311452 Mycobacterium avium 104 4529882 YP_882396.1 CDS MAV_3214 NC_008595.1 3311460 3312788 R identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR-family protein transcriptional regulator complement(3311460..3312788) Mycobacterium avium 104 4525770 YP_882397.1 CDS MAV_3215 NC_008595.1 3312819 3313484 D flavin-nucleotide-binding protein 3312819..3313484 Mycobacterium avium 104 4525545 YP_882398.1 CDS MAV_3216 NC_008595.1 3313492 3314397 R identified by match to protein family HMM PF01569; PAP2 superfamily protein complement(3313492..3314397) Mycobacterium avium 104 4528298 YP_882399.1 CDS ilvA NC_008595.1 3314407 3315690 R catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase complement(3314407..3315690) Mycobacterium avium 104 4527196 YP_882400.1 CDS MAV_3218 NC_008595.1 3315729 3316166 R identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein complement(3315729..3316166) Mycobacterium avium 104 4527565 YP_882401.1 CDS MAV_3219 NC_008595.1 3316176 3316964 R hypothetical protein complement(3316176..3316964) Mycobacterium avium 104 4528139 YP_882402.1 CDS MAV_3220 NC_008595.1 3317117 3319018 R PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase complement(3317117..3319018) Mycobacterium avium 104 4528989 YP_882403.1 CDS MAV_3221 NC_008595.1 3319015 3320835 R identified by match to protein family HMM PF00501; acyl-CoA dehydrogenase complement(3319015..3320835) Mycobacterium avium 104 4527641 YP_882404.1 CDS MAV_3222 NC_008595.1 3320857 3321273 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(3320857..3321273) Mycobacterium avium 104 4529200 YP_882405.1 CDS MAV_3223 NC_008595.1 3321332 3321778 D identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 3321332..3321778 Mycobacterium avium 104 4526327 YP_882406.1 CDS dnaE NC_008595.1 3321896 3325429 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha complement(3321896..3325429) Mycobacterium avium 104 4529658 YP_882407.1 CDS MAV_3225 NC_008595.1 3325494 3325925 R hypothetical protein complement(3325494..3325925) Mycobacterium avium 104 4528004 YP_882408.1 CDS MAV_3226 NC_008595.1 3326044 3326847 R identified by match to protein family HMM PF00106; ketoacyl reductase complement(3326044..3326847) Mycobacterium avium 104 4527232 YP_882409.1 CDS MAV_3227 NC_008595.1 3326852 3327868 R identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase complement(3326852..3327868) Mycobacterium avium 104 4528290 YP_882410.1 CDS MAV_3228 NC_008595.1 3328093 3328506 D identified by match to protein family HMM PF01152; globin 3328093..3328506 Mycobacterium avium 104 4526771 YP_882411.1 CDS MAV_3229 NC_008595.1 3328530 3329288 D hypothetical protein 3328530..3329288 Mycobacterium avium 104 4526619 YP_882412.1 CDS MAV_3230 NC_008595.1 3329289 3330173 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase d complement(3329289..3330173) Mycobacterium avium 104 4527532 YP_882413.1 CDS lspA NC_008595.1 3330208 3330756 R lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase complement(3330208..3330756) Mycobacterium avium 104 4529480 YP_882414.1 CDS MAV_3233 NC_008595.1 3330828 3331766 D identified by match to protein family HMM PF00710; L-asparaginase 3330828..3331766 Mycobacterium avium 104 4527055 YP_882415.1 CDS MAV_3232 NC_008595.1 3331731 3333107 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(3331731..3333107) Mycobacterium avium 104 4528355 YP_882416.1 CDS MAV_3234 NC_008595.1 3333229 3334068 R hypothetical protein complement(3333229..3334068) Mycobacterium avium 104 4526574 YP_882417.1 CDS ileS NC_008595.1 3334184 3337345 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase complement(3334184..3337345) Mycobacterium avium 104 4529878 YP_882418.1 CDS MAV_3236 NC_008595.1 3337669 3337905 R hypothetical protein complement(3337669..3337905) Mycobacterium avium 104 4525850 YP_882419.1 CDS MAV_3237 NC_008595.1 3338522 3339640 R identified by match to protein family HMM PF03060; 2-nitropropane dioxygenase, NPD complement(3338522..3339640) Mycobacterium avium 104 4528427 YP_882420.1 CDS pcaC NC_008595.1 3339703 3340272 R identified by match to protein family HMM PF02627; hypothetical protein complement(3339703..3340272) Mycobacterium avium 104 4530369 YP_882421.1 CDS MAV_3239 NC_008595.1 3340393 3359031 R identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF07993; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; match to protein family HMM TIGR01746; syringomycin synthetase complement(3340393..3359031) Mycobacterium avium 104 4527037 YP_882422.1 CDS MAV_3240 NC_008595.1 3359109 3359948 R identified by match to protein family HMM PF00665; transposase complement(3359109..3359948) Mycobacterium avium 104 4527866 YP_882423.1 CDS MAV_3241 NC_008595.1 3360026 3360157 R ISAfe7, transposase OrfA complement(3360026..3360157) Mycobacterium avium 104 4526606 YP_882424.1 CDS MAV_3242 NC_008595.1 3360154 3364440 R identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733; actinomycin synthetase II complement(3360154..3364440) Mycobacterium avium 104 4528992 YP_882425.1 CDS MAV_3243 NC_008595.1 3365016 3372674 R identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; match to protein family HMM TIGR01746; linear gramicidin synthetase subunit B complement(3365016..3372674) Mycobacterium avium 104 4529375 YP_882426.1 CDS MAV_3244 NC_008595.1 3372671 3382918 R identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; linear gramicidin synthetase subunit D complement(3372671..3382918) Mycobacterium avium 104 4528926 YP_882427.1 CDS MAV_3245 NC_008595.1 3382963 3383193 R identified by match to protein family HMM PF03621; hypothetical protein complement(3382963..3383193) Mycobacterium avium 104 4527998 YP_882428.1 CDS MAV_3246 NC_008595.1 3383617 3384942 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(3383617..3384942) Mycobacterium avium 104 4529835 YP_882429.1 CDS MAV_3247 NC_008595.1 3385510 3385929 D identified by match to protein family HMM PF05423; MmpS4 protein 3385510..3385929 Mycobacterium avium 104 4530116 YP_882430.1 CDS MAV_3248 NC_008595.1 3385926 3388817 D identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; Mmp14A protein 3385926..3388817 Mycobacterium avium 104 4530539 YP_882431.1 CDS MAV_3249 NC_008595.1 3388936 3391794 D identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; Mmp14A protein 3388936..3391794 Mycobacterium avium 104 4529692 YP_882432.1 CDS MAV_3250 NC_008595.1 3392019 3392966 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR01188; daunorubicin resistance ATP-binding protein 3392019..3392966 Mycobacterium avium 104 4527374 YP_882433.1 CDS MAV_3251 NC_008595.1 3392963 3393703 D identified by match to protein family HMM PF01061; ABC transporter efflux protein, DrrB family protein 3392963..3393703 Mycobacterium avium 104 4530674 YP_882434.1 CDS MAV_3252 NC_008595.1 3393700 3394494 D identified by match to protein family HMM PF01061; match to protein family HMM TIGR01248; daunorubicin resistance protein C 3393700..3394494 Mycobacterium avium 104 4525727 YP_882435.1 CDS MAV_3253 NC_008595.1 3394519 3395190 R hypothetical protein complement(3394519..3395190) Mycobacterium avium 104 4527590 YP_882436.1 CDS MAV_3254 NC_008595.1 3395418 3396692 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 3395418..3396692 Mycobacterium avium 104 4527176 YP_882437.1 CDS MAV_3255 NC_008595.1 3396778 3397800 D identified by match to protein family HMM PF00535; glycosyltransferase GtfTB 3396778..3397800 Mycobacterium avium 104 4527525 YP_882438.1 CDS MAV_3256 NC_008595.1 3397803 3398852 D identified by match to protein family HMM PF04230; polysaccharide pyruvyl transferase 3397803..3398852 Mycobacterium avium 104 4529374 YP_882439.1 CDS MAV_3257 NC_008595.1 3398870 3399526 D hypothetical protein 3398870..3399526 Mycobacterium avium 104 4527761 YP_882440.1 CDS MAV_3258 NC_008595.1 3399659 3400915 D identified by match to protein family HMM PF03033; glycosyltransferase 28 3399659..3400915 Mycobacterium avium 104 4530482 YP_882441.1 CDS MAV_3259 NC_008595.1 3400922 3401701 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; dehydrogenase DhgA complement(3400922..3401701) Mycobacterium avium 104 4526225 YP_882442.1 CDS MAV_3260 NC_008595.1 3401775 3402521 R MtfD protein complement(3401775..3402521) Mycobacterium avium 104 4529622 YP_882443.1 CDS MAV_3261 NC_008595.1 3402693 3403493 R identified by match to protein family HMM PF05711; methyltransferase MtfC complement(3402693..3403493) Mycobacterium avium 104 4529485 YP_882444.1 CDS MAV_3262 NC_008595.1 3403596 3404786 R identified by match to protein family HMM PF03033; glycosyl transferase complement(3403596..3404786) Mycobacterium avium 104 4530494 YP_882445.1 CDS MAV_3263 NC_008595.1 3405110 3405454 D identified by match to protein family HMM PF01527; ISAfe7, transposase OrfA 3405110..3405454 Mycobacterium avium 104 4527242 YP_882446.1 CDS MAV_3264 NC_008595.1 3405532 3406371 D identified by match to protein family HMM PF00665; transposase 3405532..3406371 Mycobacterium avium 104 4528199 YP_882447.1 CDS MAV_3265 NC_008595.1 3406637 3407914 R identified by match to protein family HMM PF03033; glycosyl transferase complement(3406637..3407914) Mycobacterium avium 104 4526760 YP_882448.1 CDS MAV_3266 NC_008595.1 3408037 3408858 R identified by match to protein family HMM PF05711; MtfB protein complement(3408037..3408858) Mycobacterium avium 104 4529610 YP_882449.1 CDS MAV_3267 NC_008595.1 3408831 3408959 D hypothetical protein 3408831..3408959 Mycobacterium avium 104 4529910 YP_882450.1 CDS MAV_3268 NC_008595.1 3409125 3410252 R MtfA protein complement(3409125..3410252) Mycobacterium avium 104 4529420 YP_882451.1 CDS MAV_3269 NC_008595.1 3410516 3411565 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD dependent epimerase/dehydratase complement(3410516..3411565) Mycobacterium avium 104 4529505 YP_882452.1 CDS MAV_3270 NC_008595.1 3411697 3412722 R hypothetical protein complement(3411697..3412722) Mycobacterium avium 104 4528701 YP_882453.1 CDS MAV_3271 NC_008595.1 3412780 3413619 R identified by match to protein family HMM PF00665; transposase complement(3412780..3413619) Mycobacterium avium 104 4526806 YP_882454.1 CDS MAV_3272 NC_008595.1 3413697 3414041 R identified by match to protein family HMM PF01527; ISAfe7, transposase OrfA complement(3413697..3414041) Mycobacterium avium 104 4528228 YP_882455.1 CDS MAV_3273 NC_008595.1 3414521 3415450 R hypothetical protein complement(3414521..3415450) Mycobacterium avium 104 4527776 YP_882456.1 CDS MAV_3274 NC_008595.1 3415757 3416920 R identified by match to protein family HMM PF01757; acyltransferase complement(3415757..3416920) Mycobacterium avium 104 4525574 YP_882457.1 CDS MAV_3275 NC_008595.1 3417128 3418408 R identified by match to protein family HMM PF00144; beta-lactamase complement(3417128..3418408) Mycobacterium avium 104 4529923 YP_882458.1 CDS MAV_3276 NC_008595.1 3418478 3419458 R functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase complement(3418478..3419458) Mycobacterium avium 104 4529481 YP_882459.1 CDS MAV_3277 NC_008595.1 3419541 3421793 R MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase complement(3419541..3421793) Mycobacterium avium 104 4530747 YP_882460.1 CDS mutA NC_008595.1 3421799 3423676 R identified by match to protein family HMM PF01642; match to protein family HMM TIGR00642; methylmalonyl-CoA mutase, small subunit complement(3421799..3423676) Mycobacterium avium 104 4528046 YP_882461.1 CDS MAV_3279 NC_008595.1 3423857 3424624 D hypothetical protein 3423857..3424624 Mycobacterium avium 104 4526003 YP_882462.1 CDS MAV_3280 NC_008595.1 3424686 3425675 D hypothetical protein 3424686..3425675 Mycobacterium avium 104 4529487 YP_882463.1 CDS MAV_3281 NC_008595.1 3425711 3426085 R hypothetical protein complement(3425711..3426085) Mycobacterium avium 104 4526516 YP_882464.1 CDS MAV_3282 NC_008595.1 3426082 3427536 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; hypothetical protein complement(3426082..3427536) Mycobacterium avium 104 4528861 YP_882465.1 CDS MAV_3283 NC_008595.1 3427533 3428252 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; two component system response regulator complement(3427533..3428252) Mycobacterium avium 104 4527537 YP_882466.1 CDS MAV_3284 NC_008595.1 3428543 3428878 D hypothetical protein 3428543..3428878 Mycobacterium avium 104 4530345 YP_882467.1 CDS MAV_3285 NC_008595.1 3428886 3429413 D identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 3428886..3429413 Mycobacterium avium 104 4527651 YP_882468.1 CDS MAV_3286 NC_008595.1 3429526 3429717 D hypothetical protein 3429526..3429717 Mycobacterium avium 104 4528227 YP_882469.1 CDS MAV_3287 NC_008595.1 3429802 3430500 D hypothetical protein 3429802..3430500 Mycobacterium avium 104 4529575 YP_882470.1 CDS MAV_3288 NC_008595.1 3430891 3431190 D LpqQ protein 3430891..3431190 Mycobacterium avium 104 4528547 YP_882471.1 CDS MAV_3289 NC_008595.1 3431209 3431565 R hypothetical protein complement(3431209..3431565) Mycobacterium avium 104 4528953 YP_882472.1 CDS MAV_3290 NC_008595.1 3431584 3432717 R identified by match to protein family HMM PF01145; secreted protein complement(3431584..3432717) Mycobacterium avium 104 4529677 YP_882473.1 CDS MAV_3291 NC_008595.1 3432748 3433185 R identified by match to protein family HMM PF01957; nodulation efficiency protein D (NfeD) complement(3432748..3433185) Mycobacterium avium 104 4530777 YP_882474.1 CDS MAV_3292 NC_008595.1 3433243 3434169 D hypothetical protein 3433243..3434169 Mycobacterium avium 104 4527117 YP_882475.1 CDS hemH NC_008595.1 3434173 3435183 R protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase complement(3434173..3435183) Mycobacterium avium 104 4530031 YP_882476.1 CDS MAV_3294 NC_008595.1 3435190 3435999 R Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase complement(3435190..3435999) Mycobacterium avium 104 4526682 YP_882477.1 CDS fabG NC_008595.1 3436034 3436801 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM TIGR01830; 3-oxoacyl-(acyl-carrier-protein) reductase complement(3436034..3436801) Mycobacterium avium 104 4529633 YP_882478.1 CDS MAV_3296 NC_008595.1 3436903 3437781 D hypothetical protein 3436903..3437781 Mycobacterium avium 104 4526674 YP_882479.1 CDS MAV_3297 NC_008595.1 3437864 3438871 R identified by match to protein family HMM PF00092; hypothetical protein complement(3437864..3438871) Mycobacterium avium 104 4528808 YP_882480.1 CDS MAV_3298 NC_008595.1 3438879 3439829 R identified by match to protein family HMM PF01882; hypothetical protein complement(3438879..3439829) Mycobacterium avium 104 4529261 YP_882481.1 CDS MAV_3299 NC_008595.1 3439826 3440968 R identified by match to protein family HMM PF07726; match to protein family HMM PF07728; MoxR protein complement(3439826..3440968) Mycobacterium avium 104 4525540 YP_882482.1 CDS MAV_3300 NC_008595.1 3441091 3441825 R identified by match to protein family HMM PF00877; invasin 1 complement(3441091..3441825) Mycobacterium avium 104 4526512 YP_882483.1 CDS MAV_3301 NC_008595.1 3441851 3443203 R identified by match to protein family HMM PF00877; invasion protein complement(3441851..3443203) Mycobacterium avium 104 4530382 YP_882484.1 CDS MAV_3302 NC_008595.1 3443493 3444038 R hypothetical protein complement(3443493..3444038) Mycobacterium avium 104 4526331 YP_882485.2 CDS acnA NC_008595.1 3444269 3447082 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 3444269..3447082 Mycobacterium avium 104 4527831 YP_882486.1 CDS MAV_3305 NC_008595.1 3447118 3447696 D identified by match to protein family HMM PF00440; HTH-type transcriptional repressor AcnR 3447118..3447696 Mycobacterium avium 104 4528178 YP_882487.1 CDS MAV_3304 NC_008595.1 3447693 3447890 R hypothetical protein complement(3447693..3447890) Mycobacterium avium 104 4530479 YP_882488.1 CDS MAV_3306 NC_008595.1 3448005 3449642 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3448005..3449642) Mycobacterium avium 104 4530312 YP_882489.1 CDS MAV_3307 NC_008595.1 3449666 3450475 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(3449666..3450475) Mycobacterium avium 104 4527375 YP_882490.1 CDS trx NC_008595.1 3450498 3450851 R identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin complement(3450498..3450851) Mycobacterium avium 104 4530741 YP_882491.1 CDS MAV_3309 NC_008595.1 3450993 3452822 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 3450993..3452822 Mycobacterium avium 104 4529150 YP_882492.1 CDS MAV_3310 NC_008595.1 3452912 3453688 D 27 kDa lipoprotein antigen 3452912..3453688 Mycobacterium avium 104 4529544 YP_882493.1 CDS MAV_3311 NC_008595.1 3453717 3453866 R hypothetical protein complement(3453717..3453866) Mycobacterium avium 104 4525804 YP_882494.1 CDS MAV_3312 NC_008595.1 3453868 3454536 D hypothetical protein 3453868..3454536 Mycobacterium avium 104 4528820 YP_882495.1 CDS MAV_3313 NC_008595.1 3454568 3454915 R identified by match to protein family HMM PF01883; hypothetical protein complement(3454568..3454915) Mycobacterium avium 104 4528131 YP_882496.1 CDS MAV_3314 NC_008595.1 3454890 3455369 R identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994; SUF system FeS assembly protein, NifU family protein complement(3454890..3455369) Mycobacterium avium 104 4528215 YP_882497.1 CDS MAV_3315 NC_008595.1 3455373 3456599 R identified by match to protein family HMM PF00266; match to protein family HMM TIGR01979; cysteine desulfurase complement(3455373..3456599) Mycobacterium avium 104 4528600 YP_882498.1 CDS sufC NC_008595.1 3456623 3457405 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978; FeS assembly ATPase SufC complement(3456623..3457405) Mycobacterium avium 104 4526188 YP_882499.1 CDS sufD NC_008595.1 3457402 3458592 R identified by match to protein family HMM PF01458; match to protein family HMM TIGR01981; FeS assembly protein SufD complement(3457402..3458592) Mycobacterium avium 104 4527136 YP_882500.1 CDS sufB NC_008595.1 3458592 3460040 R identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980; FeS assembly protein SufB complement(3458592..3460040) Mycobacterium avium 104 4525997 YP_882501.1 CDS MAV_3319 NC_008595.1 3460037 3460762 R identified by match to protein family HMM PF01022; DNA-binding protein complement(3460037..3460762) Mycobacterium avium 104 4527614 YP_882502.1 CDS MAV_3320 NC_008595.1 3460885 3462588 D hypothetical protein 3460885..3462588 Mycobacterium avium 104 4525948 YP_882503.1 CDS MAV_3321 NC_008595.1 3462612 3463520 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding subunit 3462612..3463520 Mycobacterium avium 104 4526261 YP_882504.1 CDS MAV_3322 NC_008595.1 3463517 3464296 D identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025; ABC transporter efflux protein, DrrB family protein 3463517..3464296 Mycobacterium avium 104 4529085 YP_882505.1 CDS MAV_3324 NC_008595.1 3464471 3465424 D identified by match to protein family HMM PF02628; cytochrome aa3 controlling protein 3464471..3465424 Mycobacterium avium 104 4526291 YP_882506.1 CDS MAV_3323 NC_008595.1 3465374 3466033 R hypothetical protein complement(3465374..3466033) Mycobacterium avium 104 4527534 YP_882507.1 CDS MAV_3325 NC_008595.1 3466032 3467006 D identified by match to protein family HMM PF00107; quinone oxidoreductase 3466032..3467006 Mycobacterium avium 104 4528258 YP_882508.1 CDS cyoE NC_008595.1 3467183 3468052 R converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase complement(3467183..3468052) Mycobacterium avium 104 4529178 YP_882509.1 CDS tkt NC_008595.1 3468366 3470465 D catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 3468366..3470465 Mycobacterium avium 104 4530258 YP_882510.1 CDS tal NC_008595.1 3470533 3471603 D catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; transaldolase 3470533..3471603 Mycobacterium avium 104 4529867 YP_882511.2 CDS zwf NC_008595.1 3471600 3473156 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 3471600..3473156 Mycobacterium avium 104 4526428 YP_882512.1 CDS opcA NC_008595.1 3473163 3474083 D identified by match to protein family HMM TIGR00534; OpcA protein 3473163..3474083 Mycobacterium avium 104 4529400 YP_882513.1 CDS pgl NC_008595.1 3474080 3474835 D identified by match to protein family HMM PF01182; match to protein family HMM TIGR01198; 6-phosphogluconolactonase 3474080..3474835 Mycobacterium avium 104 4526459 YP_882514.1 CDS MAV_3332 NC_008595.1 3474886 3475275 D hypothetical protein 3474886..3475275 Mycobacterium avium 104 4525735 YP_882515.1 CDS MAV_3333 NC_008595.1 3475294 3476223 D identified by match to protein family HMM PF00850; histone deacetylase 3475294..3476223 Mycobacterium avium 104 4529727 YP_882516.1 CDS MAV_3334 NC_008595.1 3476225 3477211 R identified by match to protein family HMM PF00248; general stress protein 69 complement(3476225..3477211) Mycobacterium avium 104 4529459 YP_882517.1 CDS MAV_3335 NC_008595.1 3477311 3478090 R hypothetical protein complement(3477311..3478090) Mycobacterium avium 104 4527556 YP_882518.1 CDS ppc NC_008595.1 3478166 3480973 R catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase complement(3478166..3480973) Mycobacterium avium 104 4526911 YP_882519.1 CDS MAV_3337 NC_008595.1 3481077 3481994 D identified by match to protein family HMM PF00296; monooxygenase 3481077..3481994 Mycobacterium avium 104 4529491 YP_882520.1 CDS secG NC_008595.1 3482012 3482245 R identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG complement(3482012..3482245) Mycobacterium avium 104 4528205 YP_882521.1 CDS tpiA NC_008595.1 3482276 3483061 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(3482276..3483061) Mycobacterium avium 104 4527238 YP_882522.1 CDS pgk NC_008595.1 3483058 3484305 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(3483058..3484305) Mycobacterium avium 104 4530496 YP_882523.1 CDS gap NC_008595.1 3484309 3485328 R identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase, type I complement(3484309..3485328) Mycobacterium avium 104 4529386 YP_882524.1 CDS MAV_3342 NC_008595.1 3485452 3486864 R dehydrogenase complement(3485452..3486864) Mycobacterium avium 104 4529894 YP_882525.1 CDS MAV_3343 NC_008595.1 3486869 3488614 R hypothetical protein complement(3486869..3488614) Mycobacterium avium 104 4528602 YP_882526.1 CDS MAV_3344 NC_008595.1 3488786 3489073 R hypothetical protein complement(3488786..3489073) Mycobacterium avium 104 4530034 YP_882527.1 CDS MAV_3345 NC_008595.1 3489131 3489367 D hypothetical protein 3489131..3489367 Mycobacterium avium 104 4526520 YP_882528.1 CDS MAV_3346 NC_008595.1 3489364 3490173 D identified by match to protein family HMM PF01553; acyltransferase domain-containing protein 3489364..3490173 Mycobacterium avium 104 4528047 YP_882529.1 CDS MAV_3348 NC_008595.1 3490189 3490407 D acyl-CoA synthase 3490189..3490407 Mycobacterium avium 104 4528551 YP_882530.1 CDS MAV_3347 NC_008595.1 3490390 3491427 R identified by match to protein family HMM PF00665; transposase complement(3490390..3491427) Mycobacterium avium 104 4526552 YP_882531.1 CDS MAV_3349 NC_008595.1 3491550 3492893 D activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 3491550..3492893 Mycobacterium avium 104 4527486 YP_882532.1 CDS MAV_3350 NC_008595.1 3492893 3494164 D identified by match to protein family HMM PF07859; alpha/beta hydrolase 3492893..3494164 Mycobacterium avium 104 4527669 YP_882533.1 CDS MAV_3351 NC_008595.1 3494336 3495187 D hypothetical protein 3494336..3495187 Mycobacterium avium 104 4526452 YP_882534.1 CDS MAV_3352 NC_008595.1 3495260 3496666 R identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; acyltransferase, ws/dgat/mgat subfamily protein complement(3495260..3496666) Mycobacterium avium 104 4527008 YP_882535.1 CDS MAV_3353 NC_008595.1 3496816 3497781 R identified by match to protein family HMM PF00823; PPE family protein complement(3496816..3497781) Mycobacterium avium 104 4528180 YP_882536.1 CDS MAV_3354 NC_008595.1 3497871 3498224 R identified by match to protein family HMM PF05305; hypothetical protein complement(3497871..3498224) Mycobacterium avium 104 4526698 YP_882537.1 CDS MAV_3355 NC_008595.1 3498281 3499645 R identified by match to protein family HMM PF00823; PPE family protein complement(3498281..3499645) Mycobacterium avium 104 4529284 YP_882538.1 CDS MAV_3356 NC_008595.1 3499657 3500910 R identified by match to protein family HMM PF00823; PPE family protein complement(3499657..3500910) Mycobacterium avium 104 4528689 YP_882539.1 CDS MAV_3357 NC_008595.1 3501733 3502716 R identified by match to protein family HMM PF02650; match to protein family HMM TIGR00647; hypothetical protein complement(3501733..3502716) Mycobacterium avium 104 4526358 YP_882540.1 CDS MAV_3358 NC_008595.1 3502707 3503783 R identified by match to protein family HMM PF01933; match to protein family HMM TIGR01826; hypothetical protein complement(3502707..3503783) Mycobacterium avium 104 4529683 YP_882541.1 CDS MAV_3359 NC_008595.1 3503780 3504676 R identified by match to protein family HMM PF03668; hypothetical protein complement(3503780..3504676) Mycobacterium avium 104 4528485 YP_882542.1 CDS uvrC NC_008595.1 3504709 3506595 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(3504709..3506595) Mycobacterium avium 104 4529782 YP_882543.1 CDS MAV_3361 NC_008595.1 3506767 3507852 D identified by match to protein family HMM PF08007; cupin superfamily protein 3506767..3507852 Mycobacterium avium 104 4529836 YP_882544.1 CDS MAV_3362 NC_008595.1 3507885 3508223 D hypothetical protein 3507885..3508223 Mycobacterium avium 104 4530296 YP_882545.1 CDS MAV_3363 NC_008595.1 3508257 3508721 R hypothetical protein complement(3508257..3508721) Mycobacterium avium 104 4527089 YP_882546.1 CDS ribH NC_008595.1 3508718 3509200 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(3508718..3509200) Mycobacterium avium 104 4527461 YP_882547.1 CDS MAV_3365 NC_008595.1 3509250 3510527 R bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein complement(3509250..3510527) Mycobacterium avium 104 4527474 YP_882548.1 CDS ribE NC_008595.1 3510649 3511248 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(3510649..3511248) Mycobacterium avium 104 4525934 YP_882549.1 CDS MAV_3367 NC_008595.1 3511367 3512074 D identified by match to protein family HMM PF07161; LprG protein 3511367..3512074 Mycobacterium avium 104 4529349 YP_882550.1 CDS MAV_3369 NC_008595.1 3512071 3513627 D identified by match to protein family HMM PF07690; aminoglycosides/tetracycline-transport integral membrane protein 3512071..3513627 Mycobacterium avium 104 4525521 YP_882551.1 CDS ribD NC_008595.1 3513624 3514649 R identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD complement(3513624..3514649) Mycobacterium avium 104 4528158 YP_882552.1 CDS rpe NC_008595.1 3514646 3515344 R catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase complement(3514646..3515344) Mycobacterium avium 104 4530572 YP_882553.1 CDS MAV_3371 NC_008595.1 3515454 3516773 R identified by match to protein family HMM PF01029; match to protein family HMM PF01189; Fmu protein complement(3515454..3516773) Mycobacterium avium 104 4525988 YP_882554.1 CDS fmt NC_008595.1 3516845 3517798 R modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase complement(3516845..3517798) Mycobacterium avium 104 4529621 YP_882555.1 CDS MAV_3373 NC_008595.1 3517950 3518777 D identified by match to protein family HMM PF01170; match to protein family HMM PF01209; match to protein family HMM PF02353; methyltransferase, UbiE/COQ5 family protein 3517950..3518777 Mycobacterium avium 104 4529829 YP_882556.1 CDS MAV_3374 NC_008595.1 3518783 3519268 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(3518783..3519268) Mycobacterium avium 104 4526556 YP_882557.1 CDS priA NC_008595.1 3519396 3521420 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(3519396..3521420) Mycobacterium avium 104 4525793 YP_882558.1 CDS MAV_3376 NC_008595.1 3521448 3522239 R identified by match to protein family HMM PF07947; hypothetical protein complement(3521448..3522239) Mycobacterium avium 104 4527963 YP_882559.1 CDS MAV_3377 NC_008595.1 3522238 3523200 D identified by match to protein family HMM PF07859; alpha/beta hydrolase 3522238..3523200 Mycobacterium avium 104 4526395 YP_882560.1 CDS MAV_3378 NC_008595.1 3523246 3524736 D identified by match to protein family HMM PF01266; lipolytic enzyme 3523246..3524736 Mycobacterium avium 104 4528589 YP_882561.1 CDS MAV_3379 NC_008595.1 3524738 3525604 R identified by match to protein family HMM PF00296; MmcJ protein complement(3524738..3525604) Mycobacterium avium 104 4527760 YP_882562.1 CDS MAV_3380 NC_008595.1 3525775 3526758 D identified by match to protein family HMM PF01037; AsnC family transcriptional regulator 3525775..3526758 Mycobacterium avium 104 4527694 YP_882563.1 CDS MAV_3381 NC_008595.1 3526768 3527334 D identified by match to protein family HMM PF01243; signal transduction histidine kinase, nitrogen specific 3526768..3527334 Mycobacterium avium 104 4528320 YP_882564.1 CDS metK NC_008595.1 3527410 3528621 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(3527410..3528621) Mycobacterium avium 104 4530013 YP_882565.1 CDS coaBC NC_008595.1 3528716 3529990 R catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase complement(3528716..3529990) Mycobacterium avium 104 4526817 YP_882566.1 CDS MAV_3384 NC_008595.1 3530012 3530338 R Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(3530012..3530338) Mycobacterium avium 104 4529957 YP_882567.1 CDS gmk NC_008595.1 3530415 3531020 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(3530415..3531020) Mycobacterium avium 104 4530107 YP_882568.1 CDS MAV_3386 NC_008595.1 3531172 3531486 R MihF protein complement(3531172..3531486) Mycobacterium avium 104 4527851 YP_882569.1 CDS MAV_3387 NC_008595.1 3531965 3532387 D identified by match to protein family HMM PF00376; match to protein family HMM PF03459; TobE protein 3531965..3532387 Mycobacterium avium 104 4525524 YP_882570.1 CDS pyrF NC_008595.1 3532393 3533217 R type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(3532393..3533217) Mycobacterium avium 104 4527734 YP_882571.1 CDS carB NC_008595.1 3533214 3536567 R four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit complement(3533214..3536567) Mycobacterium avium 104 4530757 YP_882572.1 CDS carA NC_008595.1 3536567 3537688 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(3536567..3537688) Mycobacterium avium 104 4528209 YP_882573.1 CDS MAV_3391 NC_008595.1 3537685 3538197 R hypothetical protein complement(3537685..3538197) Mycobacterium avium 104 4527448 YP_882574.1 CDS pyrC NC_008595.1 3538259 3539551 R catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase complement(3538259..3539551) Mycobacterium avium 104 4529424 YP_882575.1 CDS pyrB NC_008595.1 3539548 3540504 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit complement(3539548..3540504) Mycobacterium avium 104 4528813 YP_882576.1 CDS MAV_3394 NC_008595.1 3540501 3541073 R regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase complement(3540501..3541073) Mycobacterium avium 104 4528571 YP_882577.1 CDS MAV_3395 NC_008595.1 3541214 3542419 D identified by match to protein family HMM PF00144; beta-lactamase 3541214..3542419 Mycobacterium avium 104 4526348 YP_882578.1 CDS MAV_3396 NC_008595.1 3542416 3542970 D identified by match to protein family HMM PF00583; acetyltransferase, gnat family protein 3542416..3542970 Mycobacterium avium 104 4530061 YP_882579.1 CDS MAV_3397 NC_008595.1 3542971 3545691 R identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02985; match to protein family HMM PF03130; match to protein family HMM PF03486; match to protein family HMM PF07992; oxidoreductase/HEAT repeat-containing protein complement(3542971..3545691) Mycobacterium avium 104 4526686 YP_882580.1 CDS MAV_3398 NC_008595.1 3545691 3546428 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3545691..3546428) Mycobacterium avium 104 4530606 YP_882581.1 CDS MAV_3399 NC_008595.1 3546425 3547285 R identified by match to protein family HMM PF00528; ABC transporter permease complement(3546425..3547285) Mycobacterium avium 104 4529394 YP_882582.1 CDS MAV_3400 NC_008595.1 3547282 3548670 R ABC transporter substrate-binding protein complement(3547282..3548670) Mycobacterium avium 104 4528527 YP_882583.1 CDS MAV_3401 NC_008595.1 3548696 3548926 R identified by match to protein family HMM PF00037; hypothetical protein complement(3548696..3548926) Mycobacterium avium 104 4525747 YP_882584.1 CDS MAV_3402 NC_008595.1 3548923 3549675 R identified by match to protein family HMM PF00392; match to protein family HMM PF07702; GntR-family protein transcriptional regulator complement(3548923..3549675) Mycobacterium avium 104 4530699 YP_882585.1 CDS MAV_3403 NC_008595.1 3549915 3550721 D hypothetical protein 3549915..3550721 Mycobacterium avium 104 4525798 YP_882586.1 CDS MAV_3404 NC_008595.1 3550809 3551126 D hypothetical protein 3550809..3551126 Mycobacterium avium 104 4528997 YP_882587.1 CDS MAV_3406 NC_008595.1 3551151 3551819 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; TcrA protein 3551151..3551819 Mycobacterium avium 104 4529439 YP_882588.1 CDS MAV_3405 NC_008595.1 3551801 3553204 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; hypothetical protein complement(3551801..3553204) Mycobacterium avium 104 4525861 YP_882589.1 CDS MAV_3407 NC_008595.1 3553305 3553547 D hypothetical protein 3553305..3553547 Mycobacterium avium 104 4530200 YP_882590.1 CDS MAV_3408 NC_008595.1 3553552 3556404 R identified by match to protein family HMM PF01276; match to protein family HMM PF03711; Orn/Lys/Arg decarboxylase complement(3553552..3556404) Mycobacterium avium 104 4526298 YP_882591.1 CDS MAV_3409 NC_008595.1 3556501 3556890 R N utilization substance protein B complement(3556501..3556890) Mycobacterium avium 104 4526926 YP_882592.1 CDS nusB NC_008595.1 3556887 3557357 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(3556887..3557357) Mycobacterium avium 104 4530052 YP_882593.1 CDS efp NC_008595.1 3557354 3557917 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(3557354..3557917) Mycobacterium avium 104 4526443 YP_882594.1 CDS MAV_3412 NC_008595.1 3558005 3559114 R identified by match to protein family HMM PF00557; peptidase, M24 family protein complement(3558005..3559114) Mycobacterium avium 104 4529963 YP_882595.1 CDS MAV_3414 NC_008595.1 3559160 3559819 D hypothetical protein 3559160..3559819 Mycobacterium avium 104 4528192 YP_882596.1 CDS aroQ NC_008595.1 3559816 3560247 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(3559816..3560247) Mycobacterium avium 104 4527331 YP_882597.1 CDS aroB NC_008595.1 3560244 3561320 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(3560244..3561320) Mycobacterium avium 104 4529303 YP_882598.1 CDS aroK NC_008595.1 3561338 3561868 R catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(3561338..3561868) Mycobacterium avium 104 4528730 YP_882599.1 CDS aroC NC_008595.1 3561868 3563073 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(3561868..3563073) Mycobacterium avium 104 4528604 YP_882600.1 CDS MAV_3418 NC_008595.1 3563131 3564738 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3563131..3564738) Mycobacterium avium 104 4528588 YP_882601.1 CDS MAV_3419 NC_008595.1 3564757 3565563 R identified by match to protein family HMM PF00528; ABC transporter permease complement(3564757..3565563) Mycobacterium avium 104 4527574 YP_882602.1 CDS MAV_3420 NC_008595.1 3565560 3566522 R identified by match to protein family HMM PF00528; ABC transporter permease complement(3565560..3566522) Mycobacterium avium 104 4527151 YP_882603.1 CDS MAV_3421 NC_008595.1 3566528 3568120 R identified by match to protein family HMM PF00496; extracellular solute-binding protein, family protein 5 complement(3566528..3568120) Mycobacterium avium 104 4530785 YP_882604.1 CDS MAV_3422 NC_008595.1 3568130 3569341 R identified by match to protein family HMM PF08028; acyl-CoA dehydrogenase domain-containing protein complement(3568130..3569341) Mycobacterium avium 104 4526165 YP_882605.1 CDS MAV_3423 NC_008595.1 3569324 3570085 D hypothetical protein 3569324..3570085 Mycobacterium avium 104 4529574 YP_882606.1 CDS MAV_3424 NC_008595.1 3570088 3570468 D hypothetical protein 3570088..3570468 Mycobacterium avium 104 4526826 YP_882607.1 CDS MAV_3425 NC_008595.1 3570465 3571745 D identified by match to protein family HMM PF00296; nitrilotriacetate monooxygenase component A 3570465..3571745 Mycobacterium avium 104 4527619 YP_882608.1 CDS MAV_3426 NC_008595.1 3571767 3572852 D identified by match to protein family HMM PF00296; alkanesulfonate monooxygenase 3571767..3572852 Mycobacterium avium 104 4529718 YP_882609.1 CDS MAV_3427 NC_008595.1 3572859 3573287 R identified by match to protein family HMM PF01478; peptidase, A24 (type IV prepilin peptidase) family protein complement(3572859..3573287) Mycobacterium avium 104 4528587 YP_882610.2 CDS aroE NC_008595.1 3573298 3574182 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(3573298..3574182) Mycobacterium avium 104 4526267 YP_882611.1 CDS MAV_3429 NC_008595.1 3574157 3575404 R identified by match to protein family HMM PF02618; hypothetical protein complement(3574157..3575404) Mycobacterium avium 104 4525742 YP_882612.1 CDS MAV_3430 NC_008595.1 3575397 3575894 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(3575397..3575894) Mycobacterium avium 104 4530028 YP_882613.1 CDS alaS NC_008595.1 3575901 3578603 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(3575901..3578603) Mycobacterium avium 104 4529714 YP_882614.1 CDS MAV_3432 NC_008595.1 3578687 3579088 R identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149; hypothetical protein complement(3578687..3579088) Mycobacterium avium 104 4529097 YP_882615.1 CDS MAV_3433 NC_008595.1 3579242 3579865 D hypothetical protein 3579242..3579865 Mycobacterium avium 104 4529613 YP_882616.1 CDS MAV_3434 NC_008595.1 3579940 3580275 R hypothetical protein complement(3579940..3580275) Mycobacterium avium 104 4529998 YP_882617.1 CDS MAV_3435 NC_008595.1 3580272 3581612 R identified by match to protein family HMM PF00004; match to protein family HMM PF01078; match to protein family HMM PF07728; recombination factor protein RarA complement(3580272..3581612) Mycobacterium avium 104 4527119 YP_882618.1 CDS MAV_3436 NC_008595.1 3581771 3582748 D hypothetical protein 3581771..3582748 Mycobacterium avium 104 4526211 YP_882619.1 CDS MAV_3438 NC_008595.1 3582819 3585482 D identified by match to protein family HMM PF04168; match to protein family HMM PF04169; match to protein family HMM PF04174; hypothetical protein 3582819..3585482 Mycobacterium avium 104 4528867 YP_882620.1 CDS MAV_3437 NC_008595.1 3585479 3586501 R hypothetical protein complement(3585479..3586501) Mycobacterium avium 104 4528075 YP_882621.1 CDS MAV_3439 NC_008595.1 3586494 3587417 R identified by match to protein family HMM PF01841; transglutaminase complement(3586494..3587417) Mycobacterium avium 104 4530624 YP_882622.1 CDS MAV_3440 NC_008595.1 3587519 3587908 D identified by match to protein family HMM PF04944; hypothetical protein 3587519..3587908 Mycobacterium avium 104 4526390 YP_882623.1 CDS MAV_3441 NC_008595.1 3587914 3588972 R hypothetical protein complement(3587914..3588972) Mycobacterium avium 104 4530270 YP_882624.1 CDS MAV_3442 NC_008595.1 3588976 3589407 R identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein complement(3588976..3589407) Mycobacterium avium 104 4528443 YP_882625.1 CDS MAV_3443 NC_008595.1 3589694 3590416 R hypothetical protein complement(3589694..3590416) Mycobacterium avium 104 4526769 YP_882626.1 CDS MAV_3444 NC_008595.1 3590416 3590982 R hypothetical protein complement(3590416..3590982) Mycobacterium avium 104 4526750 YP_882627.1 CDS MAV_3445 NC_008595.1 3590993 3591916 R hypothetical protein complement(3590993..3591916) Mycobacterium avium 104 4525871 YP_882628.1 CDS MAV_3446 NC_008595.1 3592206 3592313 R hypothetical protein complement(3592206..3592313) Mycobacterium avium 104 4529308 YP_882629.1 CDS aspS NC_008595.1 3592533 3594308 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(3592533..3594308) Mycobacterium avium 104 4525680 YP_882630.1 CDS MAV_3448 NC_008595.1 3594452 3595255 D ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 3594452..3595255 Mycobacterium avium 104 4529105 YP_882631.1 CDS MAV_3449 NC_008595.1 3595265 3595762 D hypothetical protein 3595265..3595762 Mycobacterium avium 104 4527015 YP_882632.1 CDS MAV_3451 NC_008595.1 3595772 3596650 D identified by match to protein family HMM PF04228; metallopeptidase, zinc binding 3595772..3596650 Mycobacterium avium 104 4526965 YP_882633.1 CDS MAV_3450 NC_008595.1 3596647 3597522 R identified by match to protein family HMM PF00701; dihydrodipicolinate synthetase complement(3596647..3597522) Mycobacterium avium 104 4528658 YP_882634.1 CDS MAV_3452 NC_008595.1 3597534 3598331 R identified by match to protein family HMM PF00596; class II aldolase/adducin domain protein complement(3597534..3598331) Mycobacterium avium 104 4527506 YP_882635.1 CDS MAV_3453 NC_008595.1 3598378 3598914 D identified by match to protein family HMM PF01381; match to protein family HMM PF07883; transcriptional regulator 3598378..3598914 Mycobacterium avium 104 4528324 YP_882636.1 CDS MAV_3454 NC_008595.1 3598915 3599298 R hypothetical protein complement(3598915..3599298) Mycobacterium avium 104 4525994 YP_882637.1 CDS MAV_3455 NC_008595.1 3599426 3601036 D identified by match to protein family HMM PF00149; match to protein family HMM TIGR01409; metallophosphoesterase 3599426..3601036 Mycobacterium avium 104 4527787 YP_882638.1 CDS MAV_3456 NC_008595.1 3601067 3602095 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(3601067..3602095) Mycobacterium avium 104 4528774 YP_882639.1 CDS MAV_3457 NC_008595.1 3602144 3603613 R identified by match to protein family HMM PF01844; match to protein family HMM PF02720; hypothetical protein complement(3602144..3603613) Mycobacterium avium 104 4527360 YP_882640.1 CDS MAV_3458 NC_008595.1 3603678 3604037 D transposase 3603678..3604037 Mycobacterium avium 104 4530232 YP_882641.1 CDS MAV_3459 NC_008595.1 3604448 3604921 R hypothetical protein complement(3604448..3604921) Mycobacterium avium 104 4527253 YP_882642.1 CDS hisS NC_008595.1 3605150 3606412 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(3605150..3606412) Mycobacterium avium 104 4530024 YP_882643.1 CDS MAV_3461 NC_008595.1 3606416 3607072 R identified by match to protein family HMM PF00753; metallo-beta-lactamase complement(3606416..3607072) Mycobacterium avium 104 4526597 YP_882644.1 CDS MAV_3462 NC_008595.1 3607182 3608069 D identified by match to protein family HMM PF00160; peptidyl-prolyl cis-trans isomerase, cyclophilin-type 3607182..3608069 Mycobacterium avium 104 4530504 YP_882645.1 CDS MAV_3463 NC_008595.1 3608100 3609752 D identified by match to protein family HMM PF00069; match to protein family HMM PF00160; protein kinase/peptidyl-prolyl cis-trans isomerase, cyclophilin-type 3608100..3609752 Mycobacterium avium 104 4530677 YP_882646.1 CDS relA NC_008595.1 3609756 3612131 R identified by similarity to SP:P52560; match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; GTP pyrophosphokinase complement(3609756..3612131) Mycobacterium avium 104 4526150 YP_882647.1 CDS MAV_3465 NC_008595.1 3612166 3612708 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(3612166..3612708) Mycobacterium avium 104 4529108 YP_882648.1 CDS MAV_3466 NC_008595.1 3612716 3614389 R identified by match to protein family HMM PF00496; extracellular solute-binding protein, family protein 5 complement(3612716..3614389) Mycobacterium avium 104 4528583 YP_882649.1 CDS secF NC_008595.1 3614394 3615701 R forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF complement(3614394..3615701) Mycobacterium avium 104 4528515 YP_882650.1 CDS secD NC_008595.1 3615704 3617530 R part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD complement(3615704..3617530) Mycobacterium avium 104 4526809 YP_882651.1 CDS yajC NC_008595.1 3617654 3617986 R member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC complement(3617654..3617986) Mycobacterium avium 104 4526641 YP_882652.1 CDS gabT NC_008595.1 3618144 3619493 D catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 3618144..3619493 Mycobacterium avium 104 4530093 YP_882653.1 CDS MAV_3471 NC_008595.1 3619656 3623177 D identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746; acyl-CoA dehydrogenase 3619656..3623177 Mycobacterium avium 104 4530522 YP_882654.1 CDS MAV_3472 NC_008595.1 3623243 3623920 R hypothetical protein complement(3623243..3623920) Mycobacterium avium 104 4526835 YP_882655.1 CDS ruvB NC_008595.1 3624400 3625455 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(3624400..3625455) Mycobacterium avium 104 4527892 YP_882656.1 CDS ruvA NC_008595.1 3625505 3626104 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(3625505..3626104) Mycobacterium avium 104 4526275 YP_882657.1 CDS ruvC NC_008595.1 3626101 3626667 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(3626101..3626667) Mycobacterium avium 104 4526468 YP_882658.1 CDS MAV_3476 NC_008595.1 3626849 3627460 D hypothetical protein 3626849..3627460 Mycobacterium avium 104 4528977 YP_882659.1 CDS MAV_3477 NC_008595.1 3627432 3627983 D hypothetical protein 3627432..3627983 Mycobacterium avium 104 4528150 YP_882660.1 CDS MAV_3478 NC_008595.1 3627980 3628411 D hypothetical protein 3627980..3628411 Mycobacterium avium 104 4526908 YP_882661.1 CDS MAV_3479 NC_008595.1 3628456 3628911 D identified by match to protein family HMM PF03994; hypothetical protein 3628456..3628911 Mycobacterium avium 104 4527285 YP_882662.1 CDS MAV_3480 NC_008595.1 3628908 3630479 D catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 3628908..3630479 Mycobacterium avium 104 4530106 YP_882663.1 CDS MAV_3481 NC_008595.1 3630490 3631242 R identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein complement(3630490..3631242) Mycobacterium avium 104 4528810 YP_882664.1 CDS MAV_3482 NC_008595.1 3631370 3631966 R with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT complement(3631370..3631966) Mycobacterium avium 104 4526162 YP_882665.1 CDS tesB NC_008595.1 3631963 3632799 R identified by match to protein family HMM PF02551; match to protein family HMM TIGR00189; acyl-CoA thioesterase II complement(3631963..3632799) Mycobacterium avium 104 4525906 YP_882666.1 CDS MAV_3484 NC_008595.1 3632809 3633720 R with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS complement(3632809..3633720) Mycobacterium avium 104 4528894 YP_882667.1 CDS MAV_3485 NC_008595.1 3633790 3634818 R identified by match to protein family HMM PF00293; hydrolase, nudix family protein complement(3633790..3634818) Mycobacterium avium 104 4527701 YP_882668.1 CDS MAV_3486 NC_008595.1 3634815 3635939 R identified by match to protein family HMM PF00534; phosphatidylinositol alpha-mannosyltransferase complement(3634815..3635939) Mycobacterium avium 104 4529844 YP_882669.1 CDS MAV_3487 NC_008595.1 3635939 3636901 R Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase complement(3635939..3636901) Mycobacterium avium 104 4530792 YP_882670.1 CDS MAV_3488 NC_008595.1 3636898 3637539 R identified by match to protein family HMM PF01066; CDP-alcohol phosphatidyltransferase complement(3636898..3637539) Mycobacterium avium 104 4530485 YP_882671.1 CDS MAV_3489 NC_008595.1 3637552 3638136 R identified by match to protein family HMM PF01230; diadenosine tetraphosphate complement(3637552..3638136) Mycobacterium avium 104 4527316 YP_882672.1 CDS thrS NC_008595.1 3638129 3640183 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(3638129..3640183) Mycobacterium avium 104 4525646 YP_882673.1 CDS MAV_3491 NC_008595.1 3640282 3641943 D identified by match to protein family HMM PF00999; match to protein family HMM TIGR00831; Na+/H+ antiporter 3640282..3641943 Mycobacterium avium 104 4530084 YP_882674.1 CDS MAV_3492 NC_008595.1 3641990 3643234 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; N-alpha-acyl-glutamine aminoacylase complement(3641990..3643234) Mycobacterium avium 104 4529430 YP_882675.1 CDS MAV_3493 NC_008595.1 3643287 3643913 R identified by match to protein family HMM PF03061; thioesterase complement(3643287..3643913) Mycobacterium avium 104 4529262 YP_882676.1 CDS MAV_3494 NC_008595.1 3643950 3644828 R identified by match to protein family HMM PF00248; oxidoreductase YdbC complement(3643950..3644828) Mycobacterium avium 104 4529555 YP_882677.1 CDS MAV_3495 NC_008595.1 3644886 3645386 D hypothetical protein 3644886..3645386 Mycobacterium avium 104 4529892 YP_882678.1 CDS MAV_3496 NC_008595.1 3645483 3646424 R identified by match to protein family HMM PF03060; oxidoreductase, 2-nitropropane dioxygenase complement(3645483..3646424) Mycobacterium avium 104 4529969 YP_882679.1 CDS MAV_3497 NC_008595.1 3646431 3646775 R identified by match to protein family HMM PF07883; cupin domain-containing protein complement(3646431..3646775) Mycobacterium avium 104 4526779 YP_882680.1 CDS MAV_3498 NC_008595.1 3646823 3647248 R hypothetical protein complement(3646823..3647248) Mycobacterium avium 104 4526864 YP_882681.1 CDS MAV_3499 NC_008595.1 3647245 3647949 R hypothetical protein complement(3647245..3647949) Mycobacterium avium 104 4530317 YP_882682.1 CDS MAV_3500 NC_008595.1 3647962 3648318 R identified by match to protein family HMM PF00037; ferredoxin FdxA complement(3647962..3648318) Mycobacterium avium 104 4525562 YP_882683.1 CDS MAV_3501 NC_008595.1 3648375 3649220 D SAM-dependent methyltransferase 3648375..3649220 Mycobacterium avium 104 4527387 YP_882684.1 CDS MAV_3502 NC_008595.1 3649345 3649557 D hypothetical protein 3649345..3649557 Mycobacterium avium 104 4528963 YP_882685.1 CDS MAV_3503 NC_008595.1 3649741 3650004 D hypothetical protein 3649741..3650004 Mycobacterium avium 104 4529041 YP_882686.1 CDS pcaB NC_008595.1 3650018 3651244 R identified by match to protein family HMM PF00206; match to protein family HMM TIGR02426; 3-carboxy-cis,cis-muconate cycloisomerase complement(3650018..3651244) Mycobacterium avium 104 4530267 YP_882687.1 CDS pcaG NC_008595.1 3651241 3651747 R identified by match to protein family HMM PF00775; match to protein family HMM TIGR02423; protocatechuate 3,4-dioxygenase, alpha subunit complement(3651241..3651747) Mycobacterium avium 104 4528680 YP_882688.1 CDS pcaH NC_008595.1 3651797 3652561 R identified by match to protein family HMM PF00775; match to protein family HMM TIGR02422; protocatechuate 3,4-dioxygenase, beta subunit complement(3651797..3652561) Mycobacterium avium 104 4526717 YP_882689.1 CDS MAV_3507 NC_008595.1 3652629 3653114 R identified by match to protein family HMM PF01814; hemerythrin HHE cation binding domain-containing protein complement(3652629..3653114) Mycobacterium avium 104 4526406 YP_882690.1 CDS MAV_3508 NC_008595.1 3653111 3654082 R identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein complement(3653111..3654082) Mycobacterium avium 104 4529319 YP_882691.1 CDS MAV_3509 NC_008595.1 3654352 3655713 D identified by match to protein family HMM PF00355; match to protein family HMM PF00848; phthalate dioxygenase large subunit 3654352..3655713 Mycobacterium avium 104 4527555 YP_882692.1 CDS MAV_3510 NC_008595.1 3655698 3656222 D identified by match to protein family HMM PF00866; 3-phenylpropionate dioxygenase subunit beta 3655698..3656222 Mycobacterium avium 104 4526475 YP_882693.1 CDS MAV_3511 NC_008595.1 3656219 3656470 D dihydrodiol dehydrogenase 3656219..3656470 Mycobacterium avium 104 4529166 YP_882694.1 CDS MAV_3512 NC_008595.1 3656454 3657248 D Converts cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol) into 3-(2,3-dihydroxylphenyl)propionate; 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 3656454..3657248 Mycobacterium avium 104 4525983 YP_882695.1 CDS MAV_3514 NC_008595.1 3657245 3657967 D identified by match to protein family HMM PF00596; FliH protein 3657245..3657967 Mycobacterium avium 104 4525972 YP_882696.1 CDS MAV_3513 NC_008595.1 3657964 3658779 R identified by match to protein family HMM PF01614; IclR family transcriptional regulator complement(3657964..3658779) Mycobacterium avium 104 4525932 YP_882697.1 CDS MAV_3515 NC_008595.1 3658830 3659636 D identified by match to protein family HMM PF00657; hypothetical protein 3658830..3659636 Mycobacterium avium 104 4526620 YP_882698.1 CDS MAV_3516 NC_008595.1 3659684 3660298 D integral membrane protein 3659684..3660298 Mycobacterium avium 104 4529406 YP_882699.1 CDS MAV_3517 NC_008595.1 3660299 3660916 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(3660299..3660916) Mycobacterium avium 104 4526482 YP_882700.1 CDS MAV_3518 NC_008595.1 3661086 3661508 D identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; anti-anti-sigma factor 3661086..3661508 Mycobacterium avium 104 4526402 YP_882701.1 CDS MAV_3519 NC_008595.1 3661551 3662321 R identified by match to protein family HMM PF01925; hypothetical protein complement(3661551..3662321) Mycobacterium avium 104 4527783 YP_882702.1 CDS MAV_3520 NC_008595.1 3662390 3663331 R identified by match to protein family HMM PF00199; catalase complement(3662390..3663331) Mycobacterium avium 104 4527330 YP_882703.1 CDS MAV_3521 NC_008595.1 3663367 3664167 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; NAD dependent epimerase/dehydratase complement(3663367..3664167) Mycobacterium avium 104 4526466 YP_882704.1 CDS MAV_3522 NC_008595.1 3664477 3664950 D hypothetical protein 3664477..3664950 Mycobacterium avium 104 4529385 YP_882705.1 CDS MAV_3523 NC_008595.1 3665036 3666583 D identified by match to protein family HMM PF00501; acyl-CoA synthase 3665036..3666583 Mycobacterium avium 104 4528877 YP_882706.1 CDS MAV_3524 NC_008595.1 3666587 3667423 R identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase complement(3666587..3667423) Mycobacterium avium 104 4530437 YP_882707.1 CDS MAV_3525 NC_008595.1 3667512 3667805 R hypothetical protein complement(3667512..3667805) Mycobacterium avium 104 4525835 YP_882708.1 CDS MAV_3526 NC_008595.1 3667826 3668224 R hypothetical protein complement(3667826..3668224) Mycobacterium avium 104 4529070 YP_882709.1 CDS MAV_3531 NC_008595.1 3668967 3669305 D hypothetical protein 3668967..3669305 Mycobacterium avium 104 4525907 YP_882710.1 CDS MAV_3532 NC_008595.1 3670518 3671312 R identified by match to protein family HMM PF01695; helper protein complement(3670518..3671312) Mycobacterium avium 104 4530503 YP_882711.1 CDS MAV_3533 NC_008595.1 3671309 3672787 R identified by match to protein family HMM PF00665; transposase complement(3671309..3672787) Mycobacterium avium 104 4526213 YP_882712.1 CDS MAV_3534 NC_008595.1 3672840 3673037 D hypothetical protein 3672840..3673037 Mycobacterium avium 104 4527317 YP_882713.1 CDS MAV_3535 NC_008595.1 3673068 3674393 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 3673068..3674393 Mycobacterium avium 104 4526230 YP_882714.1 CDS MAV_3536 NC_008595.1 3674454 3675686 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 3674454..3675686 Mycobacterium avium 104 4525520 YP_882715.1 CDS MAV_3537 NC_008595.1 3675779 3676078 D hypothetical protein 3675779..3676078 Mycobacterium avium 104 4528706 YP_882716.1 CDS MAV_3538 NC_008595.1 3676276 3676584 D hypothetical protein 3676276..3676584 Mycobacterium avium 104 4527836 YP_882717.1 CDS MAV_3539 NC_008595.1 3676661 3677182 D hypothetical protein 3676661..3677182 Mycobacterium avium 104 4530236 YP_882718.1 CDS MAV_3540 NC_008595.1 3677190 3678467 R identified by match to protein family HMM PF04909; amidohydrolase complement(3677190..3678467) Mycobacterium avium 104 4530580 YP_882719.1 CDS MAV_3541 NC_008595.1 3678482 3679696 R identified by match to protein family HMM PF04909; amidohydrolase complement(3678482..3679696) Mycobacterium avium 104 4528111 YP_882720.1 CDS MAV_3542 NC_008595.1 3679700 3680503 R identified by match to protein family HMM PF06314; acetoacetate decarboxylase complement(3679700..3680503) Mycobacterium avium 104 4526314 YP_882721.1 CDS MAV_3543 NC_008595.1 3680500 3681438 R probable dehydrogenase; hypothetical protein complement(3680500..3681438) Mycobacterium avium 104 4530450 YP_882722.1 CDS MAV_3545 NC_008595.1 3681437 3682390 D hypothetical protein 3681437..3682390 Mycobacterium avium 104 4528461 YP_882723.1 CDS MAV_3544 NC_008595.1 3682387 3683661 R identified by match to protein family HMM PF04909; amidohydrolase complement(3682387..3683661) Mycobacterium avium 104 4528437 YP_882724.1 CDS MAV_3546 NC_008595.1 3683751 3683969 D hypothetical protein 3683751..3683969 Mycobacterium avium 104 4530003 YP_882725.1 CDS MAV_3547 NC_008595.1 3684043 3684420 D hypothetical protein 3684043..3684420 Mycobacterium avium 104 4526304 YP_882726.1 CDS MAV_3549 NC_008595.1 3684516 3684887 D identified by match to protein family HMM PF05305; hypothetical protein 3684516..3684887 Mycobacterium avium 104 4527061 YP_882727.1 CDS MAV_3548 NC_008595.1 3684818 3685486 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(3684818..3685486) Mycobacterium avium 104 4529290 YP_882728.1 CDS MAV_3550 NC_008595.1 3685572 3686402 D identified by match to protein family HMM PF00106; short chain dehydrogenase 3685572..3686402 Mycobacterium avium 104 4528074 YP_882729.1 CDS MAV_3551 NC_008595.1 3686404 3687225 D identified by match to protein family HMM PF00106; carveol dehydrogenase 3686404..3687225 Mycobacterium avium 104 4530341 YP_882730.1 CDS pcaC NC_008595.1 3687209 3688024 D identified by match to protein family HMM PF02627; hypothetical protein 3687209..3688024 Mycobacterium avium 104 4529259 YP_882731.1 CDS MAV_3553 NC_008595.1 3688028 3689491 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase 3688028..3689491 Mycobacterium avium 104 4529429 YP_882732.1 CDS MAV_3554 NC_008595.1 3689588 3689800 D hypothetical protein 3689588..3689800 Mycobacterium avium 104 4527800 YP_882733.1 CDS MAV_3555 NC_008595.1 3689967 3690887 D identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 3689967..3690887 Mycobacterium avium 104 4526208 YP_882734.1 CDS MAV_3556 NC_008595.1 3690918 3691847 R copper resistance D, putative complement(3690918..3691847) Mycobacterium avium 104 4527029 YP_882735.1 CDS MAV_3557 NC_008595.1 3691876 3692220 R identified by match to protein family HMM PF05305; hypothetical protein complement(3691876..3692220) Mycobacterium avium 104 4526668 YP_882736.1 CDS MAV_3558 NC_008595.1 3692418 3692786 R identified by match to protein family HMM PF05305; hypothetical protein complement(3692418..3692786) Mycobacterium avium 104 4530035 YP_882737.1 CDS MAV_3559 NC_008595.1 3692886 3693638 D identified by match to protein family HMM PF02861; ATP-dependent Clp protease ATP-binding subunit 3692886..3693638 Mycobacterium avium 104 4527747 YP_882738.1 CDS MAV_3560 NC_008595.1 3693813 3694205 D hypothetical protein 3693813..3694205 Mycobacterium avium 104 4528619 YP_882739.1 CDS MAV_3562 NC_008595.1 3694193 3694723 D identified by match to protein family HMM PF00583; acetyltransferase, gnat family protein 3694193..3694723 Mycobacterium avium 104 4526819 YP_882740.1 CDS MAV_3561 NC_008595.1 3694701 3695786 R identified by match to protein family HMM PF03969; ATP/GTP-binding integral membrane protein complement(3694701..3695786) Mycobacterium avium 104 4529570 YP_882741.1 CDS MAV_3563 NC_008595.1 3695821 3696585 D identified by match to protein family HMM PF01872; hypothetical protein 3695821..3696585 Mycobacterium avium 104 4529063 YP_882742.1 CDS MAV_3564 NC_008595.1 3696591 3698159 D identified by match to protein family HMM PF00561; alpha/beta hydrolase 3696591..3698159 Mycobacterium avium 104 4530148 YP_882743.1 CDS MAV_3565 NC_008595.1 3698188 3699474 D hypothetical protein 3698188..3699474 Mycobacterium avium 104 4529099 YP_882744.1 CDS msrB NC_008595.1 3699819 3700223 D identified by match to protein family HMM PF01641; match to protein family HMM TIGR00357; methionine-R-sulfoxide reductase 3699819..3700223 Mycobacterium avium 104 4529928 YP_882745.1 CDS MAV_3567 NC_008595.1 3700372 3700893 D hypothetical protein 3700372..3700893 Mycobacterium avium 104 4530398 YP_882746.1 CDS MAV_3568 NC_008595.1 3700932 3702206 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(3700932..3702206) Mycobacterium avium 104 4530507 YP_882747.1 CDS MAV_3569 NC_008595.1 3702293 3702628 D hypothetical protein 3702293..3702628 Mycobacterium avium 104 4528151 YP_882748.1 CDS MAV_3570 NC_008595.1 3702695 3703447 R identified by match to protein family HMM PF05724; thiopurine S-methyltransferase (tpmt) superfamily protein complement(3702695..3703447) Mycobacterium avium 104 4525528 YP_882749.1 CDS MAV_3571 NC_008595.1 3703444 3704139 R identified by match to protein family HMM PF06778; hypothetical protein complement(3703444..3704139) Mycobacterium avium 104 4527148 YP_882750.1 CDS hemE NC_008595.1 3705498 3706571 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(3705498..3706571) Mycobacterium avium 104 4530664 YP_882751.1 CDS MAV_3574 NC_008595.1 3706619 3707440 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3706619..3707440 Mycobacterium avium 104 4529642 YP_882752.1 CDS MAV_3575 NC_008595.1 3707604 3708185 D hypothetical protein 3707604..3708185 Mycobacterium avium 104 4529208 YP_882753.1 CDS MAV_3576 NC_008595.1 3708187 3709473 D identified by match to protein family HMM PF00570; match to protein family HMM PF01612; ribonuclease D 3708187..3709473 Mycobacterium avium 104 4530718 YP_882754.1 CDS dxs NC_008595.1 3709513 3711438 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(3709513..3711438) Mycobacterium avium 104 4530803 YP_882755.1 CDS MAV_3578 NC_008595.1 3711512 3711955 D identified by match to protein family HMM PF00571; CBS domain-containing protein 3711512..3711955 Mycobacterium avium 104 4528200 YP_882756.1 CDS MAV_3579 NC_008595.1 3711972 3713261 D identified by match to protein family HMM PF02040; match to protein family HMM PF03600; citrate transporter 3711972..3713261 Mycobacterium avium 104 4529842 YP_882757.1 CDS MAV_3580 NC_008595.1 3713341 3714528 R cg2084; identified by match to protein family HMM PF01938; match to protein family HMM PF05958; RNA methyltransferase complement(3713341..3714528) Mycobacterium avium 104 4530451 YP_882758.1 CDS MAV_3581 NC_008595.1 3714549 3716543 R amino acid permease complement(3714549..3716543) Mycobacterium avium 104 4527902 YP_882759.1 CDS MAV_3582 NC_008595.1 3716680 3717336 D identified by match to protein family HMM PF02080; match to protein family HMM PF02254; TrkA protein 3716680..3717336 Mycobacterium avium 104 4529859 YP_882760.1 CDS MAV_3583 NC_008595.1 3717492 3718148 D identified by match to protein family HMM PF02080; match to protein family HMM PF02254; TrkB protein 3717492..3718148 Mycobacterium avium 104 4526109 YP_882761.1 CDS MAV_3584 NC_008595.1 3718160 3718801 R hypothetical protein complement(3718160..3718801) Mycobacterium avium 104 4526288 YP_882762.1 CDS MAV_3585 NC_008595.1 3718861 3719211 R identified by match to protein family HMM PF01336; OB-fold nucleic acid binding domain-containing protein complement(3718861..3719211) Mycobacterium avium 104 4529412 YP_882763.1 CDS MAV_3586 NC_008595.1 3719342 3720667 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 3719342..3720667 Mycobacterium avium 104 4529582 YP_882764.1 CDS MAV_3587 NC_008595.1 3720760 3721458 D hypothetical protein 3720760..3721458 Mycobacterium avium 104 4530680 YP_882765.1 CDS MAV_3588 NC_008595.1 3721474 3722250 R hypothetical protein complement(3721474..3722250) Mycobacterium avium 104 4526307 YP_882766.1 CDS dut NC_008595.1 3722331 3722795 R catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(3722331..3722795) Mycobacterium avium 104 4528681 YP_882767.1 CDS MAV_3590 NC_008595.1 3722869 3723306 D hypothetical protein 3722869..3723306 Mycobacterium avium 104 4526364 YP_882768.1 CDS MAV_3591 NC_008595.1 3723311 3723613 R hypothetical protein complement(3723311..3723613) Mycobacterium avium 104 4525657 YP_882769.1 CDS MAV_3592 NC_008595.1 3723791 3724459 D hypothetical protein 3723791..3724459 Mycobacterium avium 104 4530691 YP_882770.1 CDS MAV_3593 NC_008595.1 3724465 3725319 R identified by match to protein family HMM PF00459; inositol-1-monophosphatase complement(3724465..3725319) Mycobacterium avium 104 4528044 YP_882771.1 CDS MAV_3594 NC_008595.1 3725445 3726251 D identified by match to protein family HMM PF00480; polyphosphate glucokinase 3725445..3726251 Mycobacterium avium 104 4525599 YP_882772.1 CDS MAV_3595 NC_008595.1 3726468 3727958 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; RNA polymerase sigma factor 3726468..3727958 Mycobacterium avium 104 4526107 YP_882773.1 CDS fabG NC_008595.1 3728178 3728987 D catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 3728178..3728987 Mycobacterium avium 104 4525602 YP_882774.1 CDS MAV_3598 NC_008595.1 3729140 3729529 D identified by match to protein family HMM PF01042; endoribonuclease L-PSP 3729140..3729529 Mycobacterium avium 104 4530137 YP_882775.1 CDS MAV_3597 NC_008595.1 3729484 3729834 R identified by match to protein family HMM PF06108; hypothetical protein complement(3729484..3729834) Mycobacterium avium 104 4529841 YP_882776.1 CDS MAV_3599 NC_008595.1 3730039 3730152 D hypothetical protein 3730039..3730152 Mycobacterium avium 104 4528760 YP_882777.1 CDS MAV_3600 NC_008595.1 3730251 3731252 D identified by match to protein family HMM PF03631; hypothetical protein 3730251..3731252 Mycobacterium avium 104 4527105 YP_882778.1 CDS MAV_3601 NC_008595.1 3731253 3731492 R hypothetical protein complement(3731253..3731492) Mycobacterium avium 104 4525676 YP_882779.1 CDS MAV_3602 NC_008595.1 3731591 3732034 D hypothetical protein 3731591..3732034 Mycobacterium avium 104 4528613 YP_882780.1 CDS MAV_3603 NC_008595.1 3732185 3733144 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma factors in this cluster are active during stationary phase; RNA polymerase sigma factor SigB 3732185..3733144 Mycobacterium avium 104 4527689 YP_882781.1 CDS MAV_3604 NC_008595.1 3733274 3733963 D identified by match to protein family HMM PF01047; match to protein family HMM PF01325; match to protein family HMM PF02742; match to protein family HMM PF04023; iron-dependent repressor IdeR 3733274..3733963 Mycobacterium avium 104 4526659 YP_882782.1 CDS MAV_3605 NC_008595.1 3734008 3735069 R hypothetical protein complement(3734008..3735069) Mycobacterium avium 104 4528980 YP_882783.1 CDS MAV_3606 NC_008595.1 3735183 3736598 D catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase 3735183..3736598 Mycobacterium avium 104 4527458 YP_882784.1 CDS MAV_3607 NC_008595.1 3736603 3737439 R hypothetical protein complement(3736603..3737439) Mycobacterium avium 104 4525615 YP_882785.1 CDS MAV_3608 NC_008595.1 3737669 3738643 D identified by match to protein family HMM PF01908; hypothetical protein 3737669..3738643 Mycobacterium avium 104 4526943 YP_882786.1 CDS MAV_3609 NC_008595.1 3738699 3739730 D identified by match to protein family HMM PF00561; hydrolase 3738699..3739730 Mycobacterium avium 104 4527476 YP_882787.1 CDS MAV_3610 NC_008595.1 3739769 3740422 D identified by match to protein family HMM PF02567; thymidylate synthase 3739769..3740422 Mycobacterium avium 104 4526636 YP_882788.1 CDS MAV_3611 NC_008595.1 3740444 3740929 R hypothetical protein complement(3740444..3740929) Mycobacterium avium 104 4528798 YP_882789.1 CDS nrdR NC_008595.1 3740968 3741432 R identified by match to protein family HMM PF03477; match to protein family HMM TIGR00244; NrdR family transcriptional regulator complement(3740968..3741432) Mycobacterium avium 104 4528590 YP_882790.1 CDS MAV_3613 NC_008595.1 3741584 3742078 R identified by match to protein family HMM PF01476; LysM domain-containing protein complement(3741584..3742078) Mycobacterium avium 104 4526321 YP_882791.1 CDS lexA NC_008595.1 3742391 3743089 D Represses a number of genes involved in the response to DNA damage; LexA repressor 3742391..3743089 Mycobacterium avium 104 4529257 YP_882792.1 CDS MAV_3615 NC_008595.1 3743096 3745303 R hypothetical protein complement(3743096..3745303) Mycobacterium avium 104 4530797 YP_882793.1 CDS MAV_3617 NC_008595.1 3745325 3745564 D hypothetical protein 3745325..3745564 Mycobacterium avium 104 4526127 YP_882794.1 CDS MAV_3616 NC_008595.1 3745561 3746721 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; long-chain specific acyl-CoA dehydrogenase complement(3745561..3746721) Mycobacterium avium 104 4526293 YP_882795.1 CDS MAV_3618 NC_008595.1 3746798 3748246 R identified by match to protein family HMM PF01926; GTPase complement(3746798..3748246) Mycobacterium avium 104 4530698 YP_882796.1 CDS dapF NC_008595.1 3748272 3749156 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(3748272..3749156) Mycobacterium avium 104 4526761 YP_882797.1 CDS miaA NC_008595.1 3749161 3750084 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(3749161..3750084) Mycobacterium avium 104 4527796 YP_882798.1 CDS MAV_3621 NC_008595.1 3750102 3750800 R hypothetical protein complement(3750102..3750800) Mycobacterium avium 104 4527720 YP_882799.1 CDS MAV_3622 NC_008595.1 3750835 3751821 R hypothetical protein complement(3750835..3751821) Mycobacterium avium 104 4526508 YP_882800.1 CDS MAV_3623 NC_008595.1 3752064 3753389 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(3752064..3753389) Mycobacterium avium 104 4528692 YP_882801.1 CDS MAV_3624 NC_008595.1 3753715 3754974 D identified by match to protein family HMM PF03993; hypothetical protein 3753715..3754974 Mycobacterium avium 104 4528195 YP_882802.1 CDS MAV_3625 NC_008595.1 3754984 3757050 R identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01574; hypothetical protein complement(3754984..3757050) Mycobacterium avium 104 4529980 YP_882803.1 CDS recX NC_008595.1 3757135 3757656 R binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX complement(3757135..3757656) Mycobacterium avium 104 4526940 YP_882804.1 CDS recA NC_008595.1 3757622 3758674 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(3757622..3758674) Mycobacterium avium 104 4526489 YP_882805.1 CDS MAV_3628 NC_008595.1 3758721 3759509 D hypothetical protein 3758721..3759509 Mycobacterium avium 104 4528693 YP_882806.1 CDS MAV_3629 NC_008595.1 3759525 3759719 R hypothetical protein complement(3759525..3759719) Mycobacterium avium 104 4527579 YP_882807.1 CDS MAV_3630 NC_008595.1 3759746 3760030 R hypothetical protein complement(3759746..3760030) Mycobacterium avium 104 4530598 YP_882808.1 CDS MAV_3631 NC_008595.1 3760075 3761235 R hypothetical protein complement(3760075..3761235) Mycobacterium avium 104 4528225 YP_882809.1 CDS MAV_3633 NC_008595.1 3761288 3761719 D identified by match to protein family HMM PF07366; match to protein family HMM PF07858; hypothetical protein 3761288..3761719 Mycobacterium avium 104 4527940 YP_882810.1 CDS MAV_3632 NC_008595.1 3761658 3762170 R hypothetical protein complement(3761658..3762170) Mycobacterium avium 104 4526093 YP_882811.1 CDS MAV_3634 NC_008595.1 3762122 3762931 R hypothetical protein complement(3762122..3762931) Mycobacterium avium 104 4528268 YP_882812.1 CDS MAV_3635 NC_008595.1 3762935 3763762 R identified by match to protein family HMM PF04012; 35kd antigen complement(3762935..3763762) Mycobacterium avium 104 4527631 YP_882813.1 CDS MAV_3636 NC_008595.1 3763881 3764207 R identified by match to protein family HMM PF01381; DNA-binding protein complement(3763881..3764207) Mycobacterium avium 104 4527352 YP_882814.1 CDS pgsA NC_008595.1 3764335 3764907 R identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(3764335..3764907) Mycobacterium avium 104 4529057 YP_882815.1 CDS MAV_3638 NC_008595.1 3764991 3765515 D catalyzes the conversion of l-glutamate to a-N-acetyl-l-glutamate in arginine biosynthesis; N-acetylglutamate synthase 3764991..3765515 Mycobacterium avium 104 4527842 YP_882816.1 CDS MAV_3639 NC_008595.1 3765604 3767931 R identified by match to protein family HMM PF01580; FtsK/SpoIIIE family protein complement(3765604..3767931) Mycobacterium avium 104 4528314 YP_882817.1 CDS MAV_3640 NC_008595.1 3768295 3768609 D identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase domain-containing protein 3768295..3768609 Mycobacterium avium 104 4528416 YP_882818.1 CDS MAV_3641 NC_008595.1 3768609 3769439 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 3768609..3769439 Mycobacterium avium 104 4529939 YP_882819.1 CDS MAV_3642 NC_008595.1 3769484 3770317 D identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein 3769484..3770317 Mycobacterium avium 104 4527531 YP_882820.1 CDS MAV_3643 NC_008595.1 3770426 3772102 R identified by match to protein family HMM PF00753; match to protein family HMM PF07521; hydrolase of the metallo-beta-lactamase complement(3770426..3772102) Mycobacterium avium 104 4529868 YP_882821.1 CDS dapA NC_008595.1 3772122 3773024 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(3772122..3773024) Mycobacterium avium 104 4528840 YP_882822.1 CDS thyX NC_008595.1 3773068 3773820 R flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase complement(3773068..3773820) Mycobacterium avium 104 4528374 YP_882823.1 CDS MAV_3646 NC_008595.1 3774016 3774318 D hypothetical protein 3774016..3774318 Mycobacterium avium 104 4530039 YP_882824.1 CDS MAV_3647 NC_008595.1 3774319 3775026 D hypothetical protein 3774319..3775026 Mycobacterium avium 104 4527629 YP_882825.1 CDS MAV_3648 NC_008595.1 3775046 3775441 D hypothetical protein 3775046..3775441 Mycobacterium avium 104 4527878 YP_882826.1 CDS MAV_3649 NC_008595.1 3775521 3776528 R type I restriction-modification enzyme, R subunit complement(3775521..3776528) Mycobacterium avium 104 4528940 YP_882827.1 CDS MAV_3650 NC_008595.1 3776529 3777263 R hypothetical protein complement(3776529..3777263) Mycobacterium avium 104 4527604 YP_882828.1 CDS folA NC_008595.1 3777333 3777863 R identified by match to protein family HMM PF00186; dihydrofolate reductase complement(3777333..3777863) Mycobacterium avium 104 4526704 YP_882829.1 CDS thyA NC_008595.1 3777875 3778675 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(3777875..3778675) Mycobacterium avium 104 4526517 YP_882830.1 CDS MAV_3654 NC_008595.1 3778718 3779458 D identified by match to protein family HMM PF01738; hydrolase 3778718..3779458 Mycobacterium avium 104 4530167 YP_882831.1 CDS MAV_3653 NC_008595.1 3779447 3780676 R identified by match to protein family HMM PF03033; glycosyltransferase GtfE complement(3779447..3780676) Mycobacterium avium 104 4528051 YP_882832.1 CDS fabG NC_008595.1 3780740 3781519 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase complement(3780740..3781519) Mycobacterium avium 104 4529472 YP_882833.1 CDS MAV_3656 NC_008595.1 3781639 3781965 D hypothetical protein 3781639..3781965 Mycobacterium avium 104 4529397 YP_882834.1 CDS MAV_3657 NC_008595.1 3781978 3785205 R identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF01039; match to protein family HMM PF02785; match to protein family HMM PF02786; carbamoyl-phosphate synthase/carboxyl transferase complement(3781978..3785205) Mycobacterium avium 104 4529772 YP_882835.1 CDS MAV_3658 NC_008595.1 3785202 3786734 R identified by match to protein family HMM PF00501; acyl-CoA dehydrogenase complement(3785202..3786734) Mycobacterium avium 104 4525805 YP_882836.1 CDS MAV_3659 NC_008595.1 3786789 3787622 D hypothetical protein 3786789..3787622 Mycobacterium avium 104 4526891 YP_882837.1 CDS MAV_3660 NC_008595.1 3787652 3788119 R multimeric flavodoxin WrbA complement(3787652..3788119) Mycobacterium avium 104 4528146 YP_882838.1 CDS MAV_3661 NC_008595.1 3788116 3788571 R identified by match to protein family HMM PF07719; TPR repeat-containing protein complement(3788116..3788571) Mycobacterium avium 104 4527623 YP_882839.2 CDS dapB NC_008595.1 3788597 3789334 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(3788597..3789334) Mycobacterium avium 104 4526979 YP_882840.1 CDS MAV_3663 NC_008595.1 3789384 3789944 R hypothetical protein complement(3789384..3789944) Mycobacterium avium 104 4525963 YP_882841.1 CDS MAV_3664 NC_008595.1 3790113 3791468 D identified by match to protein family HMM PF01844; match to protein family HMM PF02720; hypothetical protein 3790113..3791468 Mycobacterium avium 104 4528993 YP_882842.1 CDS dapB NC_008595.1 3791474 3792556 R identified by match to protein family HMM PF01113; dihydrodipicolinate reductase N-terminus domain-containing protein complement(3791474..3792556) Mycobacterium avium 104 4529245 YP_882843.1 CDS MAV_3666 NC_008595.1 3792561 3793556 R identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein complement(3792561..3793556) Mycobacterium avium 104 4525974 YP_882844.1 CDS MAV_3667 NC_008595.1 3793549 3793737 R hypothetical protein complement(3793549..3793737) Mycobacterium avium 104 4525655 YP_882845.1 CDS MAV_3668 NC_008595.1 3793753 3794328 D hypothetical protein 3793753..3794328 Mycobacterium avium 104 4528026 YP_882846.1 CDS MAV_3669 NC_008595.1 3794337 3795437 R identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; oxidoreductase complement(3794337..3795437) Mycobacterium avium 104 4526271 YP_882847.1 CDS MAV_3670 NC_008595.1 3795434 3797218 R identified by match to protein family HMM PF00106; match to protein family HMM PF00561; short chain dehydrogenase complement(3795434..3797218) Mycobacterium avium 104 4526353 YP_882848.1 CDS MAV_3671 NC_008595.1 3797222 3798130 R FF domain-containing protein complement(3797222..3798130) Mycobacterium avium 104 4526643 YP_882849.1 CDS MAV_3672 NC_008595.1 3798306 3798767 R hypothetical protein complement(3798306..3798767) Mycobacterium avium 104 4527468 YP_882850.1 CDS ald NC_008595.1 3798879 3800000 D identified by match to protein family HMM PF01262; match to protein family HMM PF05222; match to protein family HMM TIGR00518; alanine dehydrogenase 3798879..3800000 Mycobacterium avium 104 4530716 YP_882851.1 CDS MAV_3673 NC_008595.1 3799997 3800989 R identified by match to protein family HMM PF03060; dioxygenase complement(3799997..3800989) Mycobacterium avium 104 4527678 YP_882852.1 CDS MAV_3675 NC_008595.1 3801104 3802477 R identified by match to protein family HMM PF00675; match to protein family HMM PF05193; protease complement(3801104..3802477) Mycobacterium avium 104 4525618 YP_882853.1 CDS gpsI NC_008595.1 3802464 3804710 R identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; match to protein family HMM TIGR02696; polynucleotide phosphorylase/polyadenylase complement(3802464..3804710) Mycobacterium avium 104 4526706 YP_882854.1 CDS rpsO NC_008595.1 3805147 3805416 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(3805147..3805416) Mycobacterium avium 104 4529924 YP_882855.1 CDS ribF NC_008595.1 3805545 3806468 R catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase complement(3805545..3806468) Mycobacterium avium 104 4526223 YP_882856.1 CDS MAV_3679 NC_008595.1 3806632 3807336 D identified by match to protein family HMM PF01325; match to protein family HMM PF02742; match to protein family HMM PF04023; iron repressor protein 3806632..3807336 Mycobacterium avium 104 4527281 YP_882857.1 CDS MAV_3680 NC_008595.1 3807463 3808719 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(3807463..3808719) Mycobacterium avium 104 4526113 YP_882858.1 CDS MAV_3681 NC_008595.1 3808727 3809917 R lipid-transfer protein complement(3808727..3809917) Mycobacterium avium 104 4526068 YP_882859.1 CDS truB NC_008595.1 3810050 3810979 R catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B complement(3810050..3810979) Mycobacterium avium 104 4526282 YP_882860.1 CDS MAV_3683 NC_008595.1 3810976 3811653 R identified by match to protein family HMM PF01648; Sfp-type phosphopantetheinyl transferase complement(3810976..3811653) Mycobacterium avium 104 4528945 YP_882861.1 CDS MAV_3684 NC_008595.1 3811650 3812615 R identified by match to protein family HMM PF00149; metallophosphoesterase complement(3811650..3812615) Mycobacterium avium 104 4529811 YP_882862.1 CDS MAV_3685 NC_008595.1 3812745 3813335 D hypothetical protein 3812745..3813335 Mycobacterium avium 104 4527737 YP_882863.1 CDS MAV_3687 NC_008595.1 3813339 3815066 D identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976; hydrolase CocE/NonD family protein 3813339..3815066 Mycobacterium avium 104 4527670 YP_882864.1 CDS MAV_3686 NC_008595.1 3815025 3815585 R hypothetical protein complement(3815025..3815585) Mycobacterium avium 104 4527564 YP_882865.1 CDS MAV_3688 NC_008595.1 3815582 3815851 R hypothetical protein complement(3815582..3815851) Mycobacterium avium 104 4529680 YP_882866.1 CDS MAV_3689 NC_008595.1 3815922 3816671 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3815922..3816671 Mycobacterium avium 104 4525836 YP_882867.1 CDS MAV_3690 NC_008595.1 3816729 3817295 D hypothetical protein 3816729..3817295 Mycobacterium avium 104 4527010 YP_882868.1 CDS MAV_3691 NC_008595.1 3817313 3818266 R identified by match to protein family HMM PF01368; match to protein family HMM PF02272; DHH family protein complement(3817313..3818266) Mycobacterium avium 104 4525910 YP_882869.1 CDS rbfA NC_008595.1 3818283 3818771 R associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A complement(3818283..3818771) Mycobacterium avium 104 4530408 YP_882870.1 CDS infB NC_008595.1 3818822 3821566 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(3818822..3821566) Mycobacterium avium 104 4530339 YP_882871.1 CDS MAV_3694 NC_008595.1 3821642 3821896 R identified by match to protein family HMM PF04296; hypothetical protein complement(3821642..3821896) Mycobacterium avium 104 4529888 YP_882872.1 CDS nusA NC_008595.1 3822060 3823115 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(3822060..3823115) Mycobacterium avium 104 4528637 YP_882873.1 CDS MAV_3696 NC_008595.1 3823112 3823648 R in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein complement(3823112..3823648) Mycobacterium avium 104 4525542 YP_882874.1 CDS MAV_3697 NC_008595.1 3823645 3823743 R hypothetical protein complement(3823645..3823743) Mycobacterium avium 104 4528112 YP_882875.1 CDS MAV_3698 NC_008595.1 3823952 3824404 D hypothetical protein 3823952..3824404 Mycobacterium avium 104 4529885 YP_882876.1 CDS MAV_3699 NC_008595.1 3824401 3824847 D hypothetical protein 3824401..3824847 Mycobacterium avium 104 4525966 YP_882877.1 CDS proS NC_008595.1 3824848 3826596 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(3824848..3826596) Mycobacterium avium 104 4525882 YP_882878.1 CDS MAV_3701 NC_008595.1 3826654 3827892 R hypothetical protein complement(3826654..3827892) Mycobacterium avium 104 4527057 YP_882879.1 CDS MAV_3702 NC_008595.1 3828087 3829703 R identified by match to protein family HMM PF07690; transporter, major facilitator family protein complement(3828087..3829703) Mycobacterium avium 104 4525964 YP_882880.1 CDS cobA NC_008595.1 3829737 3830942 R identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; match to protein family HMM TIGR01470; uroporphyrin-III C-methyltransferase complement(3829737..3830942) Mycobacterium avium 104 4526329 YP_882881.1 CDS cobB NC_008595.1 3830952 3832364 R responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase complement(3830952..3832364) Mycobacterium avium 104 4525564 YP_882882.1 CDS cobO NC_008595.1 3832358 3832972 R catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase complement(3832358..3832972) Mycobacterium avium 104 4525666 YP_882883.1 CDS MAV_3706 NC_008595.1 3833002 3834843 R identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728; chelatase complement(3833002..3834843) Mycobacterium avium 104 4526140 YP_882884.1 CDS MAV_3707 NC_008595.1 3834840 3835310 R identified by match to protein family HMM PF00583; acetyltransferase, gnat family protein complement(3834840..3835310) Mycobacterium avium 104 4526056 YP_882885.2 CDS mqo NC_008595.1 3835413 3836918 R malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase complement(3835413..3836918) Mycobacterium avium 104 4530447 YP_882886.1 CDS MAV_3709 NC_008595.1 3837056 3838066 D hypothetical protein 3837056..3838066 Mycobacterium avium 104 4528346 YP_882887.1 CDS MAV_3710 NC_008595.1 3838077 3839456 D catalyzes the reduction of mycothione or glutathione to mycothione or glutathione disulfide; mycothione reductase 3838077..3839456 Mycobacterium avium 104 4529654 YP_882888.1 CDS MAV_3711 NC_008595.1 3839564 3840709 D identified by match to protein family HMM PF03824; match to protein family HMM TIGR00802; transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family protein 3839564..3840709 Mycobacterium avium 104 4526495 YP_882889.1 CDS MAV_3712 NC_008595.1 3840788 3841921 D identified by match to protein family HMM PF01663; type I phosphodiesterase / nucleotide pyrophosphatase 3840788..3841921 Mycobacterium avium 104 4528685 YP_882890.1 CDS MAV_3713 NC_008595.1 3841935 3842495 D hypothetical protein 3841935..3842495 Mycobacterium avium 104 4527292 YP_882891.1 CDS MAV_3715 NC_008595.1 3842616 3843545 D identified by match to protein family HMM PF00823; PPE family protein 3842616..3843545 Mycobacterium avium 104 4527218 YP_882892.1 CDS MAV_3714 NC_008595.1 3843542 3844318 R identified by match to protein family HMM PF00106; short chain dehydrogenase complement(3843542..3844318) Mycobacterium avium 104 4528951 YP_882893.1 CDS MAV_3717 NC_008595.1 3845678 3846388 R identified by match to protein family HMM PF00117; match to protein family HMM PF07722; class I glutamine amidotransferase, putative complement(3845678..3846388) Mycobacterium avium 104 4526343 YP_882894.1 CDS glnA NC_008595.1 3846423 3847829 R identified by match to protein family HMM PF00120; glutamine synthetase catalytic domain complement(3846423..3847829) Mycobacterium avium 104 4529537 YP_882895.1 CDS MAV_3719 NC_008595.1 3847842 3848402 R hypothetical protein complement(3847842..3848402) Mycobacterium avium 104 4525806 YP_882896.1 CDS cobQ NC_008595.1 3848523 3850016 R catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase complement(3848523..3850016) Mycobacterium avium 104 4528152 YP_882897.1 CDS map NC_008595.1 3850021 3850878 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential; methionine aminopeptidase complement(3850021..3850878) Mycobacterium avium 104 4529309 YP_882898.1 CDS MAV_3723 NC_008595.1 3851543 3853342 R identified by match to protein family HMM PF00905; match to protein family HMM PF05223; hypothetical protein complement(3851543..3853342) Mycobacterium avium 104 4530640 YP_882899.1 CDS MAV_3724 NC_008595.1 3853519 3854331 R identified by match to protein family HMM PF00583; acetyltransferase complement(3853519..3854331) Mycobacterium avium 104 4529499 YP_882900.1 CDS ispG NC_008595.1 3854422 3855516 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(3854422..3855516) Mycobacterium avium 104 4528154 YP_882901.1 CDS MAV_3726 NC_008595.1 3855621 3856844 R identified by match to protein family HMM PF02163; peptidase M50 complement(3855621..3856844) Mycobacterium avium 104 4528513 YP_882902.1 CDS dxr NC_008595.1 3856864 3858087 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(3856864..3858087) Mycobacterium avium 104 4528778 YP_882903.1 CDS MAV_3728 NC_008595.1 3858092 3859321 R identified by match to protein family HMM PF02683; cytochrome C biogenesis protein transmembrane region complement(3858092..3859321) Mycobacterium avium 104 4526621 YP_882904.1 CDS MAV_3729 NC_008595.1 3859323 3859796 R 15 kDa antigen complement(3859323..3859796) Mycobacterium avium 104 4525893 YP_882905.1 CDS cdsA NC_008595.1 3861008 3861943 R identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase complement(3861008..3861943) Mycobacterium avium 104 4530483 YP_882906.1 CDS frr NC_008595.1 3861976 3862533 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(3861976..3862533) Mycobacterium avium 104 4527533 YP_882907.1 CDS pyrH NC_008595.1 3862655 3863344 R identified by match to protein family HMM PF00696; match to protein family HMM TIGR02075; uridylate kinase complement(3862655..3863344) Mycobacterium avium 104 4529294 YP_882908.1 CDS MAV_3734 NC_008595.1 3863784 3864023 D identified by match to protein family HMM PF05532; hypothetical protein 3863784..3864023 Mycobacterium avium 104 4530610 YP_882909.1 CDS MAV_3735 NC_008595.1 3864192 3864887 D identified by match to protein family HMM PF00486; GlnR family transcriptional regulator 3864192..3864887 Mycobacterium avium 104 4525600 YP_882910.1 CDS MAV_3736 NC_008595.1 3864911 3865879 R identified by match to protein family HMM PF01553; acyltransferase domain-containing protein complement(3864911..3865879) Mycobacterium avium 104 4528430 YP_882911.1 CDS MAV_3737 NC_008595.1 3865946 3866518 R hypothetical protein complement(3865946..3866518) Mycobacterium avium 104 4525856 YP_882912.1 CDS MAV_3738 NC_008595.1 3866832 3867008 D hypothetical protein 3866832..3867008 Mycobacterium avium 104 4529731 YP_882913.1 CDS MAV_3740 NC_008595.1 3867998 3868411 R identified by match to protein family HMM PF06150; ChaB family protein complement(3867998..3868411) Mycobacterium avium 104 4529510 YP_882914.1 CDS MAV_3741 NC_008595.1 3868425 3868952 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 3868425..3868952 Mycobacterium avium 104 4528138 YP_882915.1 CDS tsf NC_008595.1 3870433 3871260 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(3870433..3871260) Mycobacterium avium 104 4529849 YP_882916.1 CDS rpsB NC_008595.1 3871274 3872104 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(3871274..3872104) Mycobacterium avium 104 4528369 YP_882917.1 CDS MAV_3745 NC_008595.1 3872379 3872882 D identified by match to protein family HMM PF01551; M23 peptidase domain-containing protein 3872379..3872882 Mycobacterium avium 104 4529773 YP_882918.1 CDS xerC NC_008595.1 3872983 3873888 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC complement(3872983..3873888) Mycobacterium avium 104 4526032 YP_882919.1 CDS MAV_3747 NC_008595.1 3873922 3875082 R identified by match to protein family HMM PF01070; lactate 2-monooxygenase complement(3873922..3875082) Mycobacterium avium 104 4529126 YP_882920.1 CDS MAV_3748 NC_008595.1 3875108 3875959 R identified by match to protein family HMM PF04954; match to protein family HMM PF08021; siderophore utilization protein complement(3875108..3875959) Mycobacterium avium 104 4528765 YP_882921.1 CDS MAV_3749 NC_008595.1 3876003 3877169 R identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732; smf family protein complement(3876003..3877169) Mycobacterium avium 104 4526315 YP_882922.1 CDS MAV_3750 NC_008595.1 3877280 3877555 D hypothetical protein 3877280..3877555 Mycobacterium avium 104 4530685 YP_882923.1 CDS MAV_3751 NC_008595.1 3877582 3879093 R identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368; Mg-chelatase subunits D/I family protein, ComM subfamily protein complement(3877582..3879093) Mycobacterium avium 104 4528596 YP_882924.1 CDS MAV_3752 NC_008595.1 3879093 3879479 R identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; hypothetical protein complement(3879093..3879479) Mycobacterium avium 104 4529780 YP_882925.1 CDS fdhD NC_008595.1 3879593 3880411 R involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein complement(3879593..3880411) Mycobacterium avium 104 4525688 YP_882926.1 CDS MAV_3754 NC_008595.1 3880468 3881451 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD dependent epimerase/dehydratase complement(3880468..3881451) Mycobacterium avium 104 4530512 YP_882927.1 CDS MAV_3755 NC_008595.1 3881746 3882516 D identified by match to protein family HMM PF03861; ANTAR domain-containing protein 3881746..3882516 Mycobacterium avium 104 4526963 YP_882928.1 CDS MAV_3756 NC_008595.1 3882523 3882828 R hypothetical protein complement(3882523..3882828) Mycobacterium avium 104 4527503 YP_882929.1 CDS rnhB NC_008595.1 3882891 3883583 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(3882891..3883583) Mycobacterium avium 104 4529914 YP_882930.1 CDS lepB NC_008595.1 3883613 3884512 R identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I complement(3883613..3884512) Mycobacterium avium 104 4529320 YP_882931.1 CDS rplS NC_008595.1 3884570 3884911 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(3884570..3884911) Mycobacterium avium 104 4527858 YP_882932.1 CDS MAV_3761 NC_008595.1 3885256 3886224 D LppW protein 3885256..3886224 Mycobacterium avium 104 4530710 YP_882933.1 CDS trmD NC_008595.1 3886221 3886940 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(3886221..3886940) Mycobacterium avium 104 4528864 YP_882934.1 CDS rimM NC_008595.1 3886947 3887474 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(3886947..3887474) Mycobacterium avium 104 4528073 YP_882935.1 CDS MAV_3763 NC_008595.1 3887484 3887726 R hypothetical protein complement(3887484..3887726) Mycobacterium avium 104 4529379 YP_882936.1 CDS rpsP NC_008595.1 3887735 3888247 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(3887735..3888247) Mycobacterium avium 104 4528016 YP_882937.1 CDS MAV_3765 NC_008595.1 3888380 3888799 R hypothetical protein complement(3888380..3888799) Mycobacterium avium 104 4530456 YP_882938.1 CDS MAV_3766 NC_008595.1 3888832 3889728 D identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase 3888832..3889728 Mycobacterium avium 104 4525733 YP_882939.1 CDS MAV_3767 NC_008595.1 3889832 3890425 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(3889832..3890425) Mycobacterium avium 104 4526575 YP_882940.1 CDS MAV_3768 NC_008595.1 3890427 3892232 R N-acyl-D-glutamate amidohydrolase complement(3890427..3892232) Mycobacterium avium 104 4529334 YP_882941.1 CDS MAV_3769 NC_008595.1 3892352 3893443 R identified by match to protein family HMM PF01979; amidohydrolase complement(3892352..3893443) Mycobacterium avium 104 4528168 YP_882942.1 CDS ffh NC_008595.1 3893449 3895002 R identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein complement(3893449..3895002) Mycobacterium avium 104 4529709 YP_882943.1 CDS MAV_3771 NC_008595.1 3895218 3896009 D identified by match to protein family HMM PF00561; alpha/beta hydrolase 3895218..3896009 Mycobacterium avium 104 4529401 YP_882944.1 CDS MAV_3772 NC_008595.1 3896111 3897850 D identified by match to protein family HMM PF04851; DNA or RNA helicase of superfamily protein II 3896111..3897850 Mycobacterium avium 104 4526418 YP_882945.1 CDS glnD NC_008595.1 3897867 3900311 R catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; also involved in adenylylating and deadelnylyating GlnK; PII uridylyl-transferase complement(3897867..3900311) Mycobacterium avium 104 4530421 YP_882946.1 CDS MAV_3774 NC_008595.1 3900357 3900695 R identified by match to protein family HMM PF00543; nitrogen regulatory protein P-II complement(3900357..3900695) Mycobacterium avium 104 4525719 YP_882947.1 CDS amt NC_008595.1 3900692 3902125 R identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836; ammonium transporter complement(3900692..3902125) Mycobacterium avium 104 4528671 YP_882948.1 CDS ftsY NC_008595.1 3902271 3903557 R identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY complement(3902271..3903557) Mycobacterium avium 104 4528984 YP_882949.1 CDS smc NC_008595.1 3903627 3907217 R identified by match to protein family HMM PF02463; match to protein family HMM PF06470; match to protein family HMM TIGR02168; chromosome segregation protein SMC complement(3903627..3907217) Mycobacterium avium 104 4526860 YP_882950.1 CDS MAV_3778 NC_008595.1 3907266 3907385 D hypothetical protein 3907266..3907385 Mycobacterium avium 104 4527729 YP_882951.1 CDS MAV_3779 NC_008595.1 3907417 3907710 R catalyzes the hydrolysis of acylphosphate; acylphosphatase complement(3907417..3907710) Mycobacterium avium 104 4527243 YP_882952.1 CDS MAV_3780 NC_008595.1 3907697 3908053 R identified by match to protein family HMM PF02566; hypothetical protein complement(3907697..3908053) Mycobacterium avium 104 4526849 YP_882953.1 CDS MAV_3781 NC_008595.1 3908175 3908951 D identified by match to protein family HMM PF02585; GlcNAc-PI de-N-acetylase 3908175..3908951 Mycobacterium avium 104 4530040 YP_882954.1 CDS mutM NC_008595.1 3908958 3909809 R Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase complement(3908958..3909809) Mycobacterium avium 104 4528223 YP_882955.1 CDS rnc NC_008595.1 3909830 3910543 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(3909830..3910543) Mycobacterium avium 104 4525724 YP_882956.1 CDS MAV_3784 NC_008595.1 3910540 3911073 R identified by match to protein family HMM PF02620; hypothetical protein complement(3910540..3911073) Mycobacterium avium 104 4527687 YP_882957.1 CDS MAV_3785 NC_008595.1 3911196 3911933 R hypothetical protein complement(3911196..3911933) Mycobacterium avium 104 4527810 YP_882958.1 CDS MAV_3786 NC_008595.1 3912086 3913066 R hypothetical protein complement(3912086..3913066) Mycobacterium avium 104 4526918 YP_882959.1 CDS MAV_3787 NC_008595.1 3913258 3914421 D identified by match to protein family HMM PF03773; hypothetical protein 3913258..3914421 Mycobacterium avium 104 4525608 YP_882960.1 CDS MAV_3788 NC_008595.1 3914463 3916172 R catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase catalytic subunit complement(3914463..3916172) Mycobacterium avium 104 4528267 YP_882961.1 CDS MAV_3789 NC_008595.1 3916471 3917487 D identified by match to protein family HMM PF02720; hypothetical protein 3916471..3917487 Mycobacterium avium 104 4528007 YP_882962.1 CDS MAV_3790 NC_008595.1 3917497 3918936 D identified by match to protein family HMM PF00239; match to protein family HMM PF07508; integrase/recombinase 3917497..3918936 Mycobacterium avium 104 4528167 YP_882963.1 CDS MAV_3791 NC_008595.1 3919180 3920178 D identified by match to protein family HMM PF00004; ATPase 3919180..3920178 Mycobacterium avium 104 4529398 YP_882964.1 CDS MAV_3792 NC_008595.1 3920209 3922743 D Y4bN protein 3920209..3922743 Mycobacterium avium 104 4526246 YP_882965.1 CDS MAV_3793 NC_008595.1 3923136 3923282 R hypothetical protein complement(3923136..3923282) Mycobacterium avium 104 4530330 YP_882966.1 CDS MAV_3794 NC_008595.1 3923290 3924789 R replication initiation protein complement(3923290..3924789) Mycobacterium avium 104 4528807 YP_882967.1 CDS MAV_3795 NC_008595.1 3924782 3926224 R identified by match to protein family HMM PF01580; cell divisionftsk/SpoIIIE complement(3924782..3926224) Mycobacterium avium 104 4528473 YP_882968.1 CDS MAV_3796 NC_008595.1 3926324 3926662 R Pra protein complement(3926324..3926662) Mycobacterium avium 104 4528752 YP_882969.1 CDS MAV_3797 NC_008595.1 3926922 3927719 D identified by match to protein family HMM PF01381; XRE family transcriptional regulator 3926922..3927719 Mycobacterium avium 104 4530429 YP_882970.1 CDS MAV_3798 NC_008595.1 3927727 3928194 D identified by match to protein family HMM PF00293; nudix hydrolase 3927727..3928194 Mycobacterium avium 104 4526394 YP_882971.1 CDS MAV_3799 NC_008595.1 3928208 3928666 R metal dependent phosphohydrolase complement(3928208..3928666) Mycobacterium avium 104 4525556 YP_882972.1 CDS MAV_3800 NC_008595.1 3929077 3929349 R HTH-type transcriptional regulator complement(3929077..3929349) Mycobacterium avium 104 4530216 YP_882973.1 CDS MAV_3802 NC_008595.1 3933023 3933448 R hypothetical protein complement(3933023..3933448) Mycobacterium avium 104 4527930 YP_882974.1 CDS MAV_3803 NC_008595.1 3933523 3934146 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(3933523..3934146) Mycobacterium avium 104 4527759 YP_882975.1 CDS MAV_3804 NC_008595.1 3934143 3934658 R identified by match to protein family HMM PF03061; thioesterase complement(3934143..3934658) Mycobacterium avium 104 4528542 YP_882976.1 CDS MAV_3805 NC_008595.1 3934801 3935469 D identified by match to protein family HMM PF00440; transcriptional regulator 3934801..3935469 Mycobacterium avium 104 4529411 YP_882977.1 CDS MAV_3806 NC_008595.1 3935650 3936276 R identified by match to protein family HMM PF00441; match to protein family HMM PF08028; dibenzothiophene desulfurization enzyme C complement(3935650..3936276) Mycobacterium avium 104 4527857 YP_882978.1 CDS MAV_3807 NC_008595.1 3936431 3936550 D hypothetical protein 3936431..3936550 Mycobacterium avium 104 4529029 YP_882979.1 CDS MAV_3808 NC_008595.1 3936894 3937847 R 2'-hydroxybiphenyl-2-sulfinate desulfinase complement(3936894..3937847) Mycobacterium avium 104 4529940 YP_882980.1 CDS MAV_3809 NC_008595.1 3937964 3939322 R identified by match to protein family HMM PF00296; dibenzothiophene desulfurization enzyme A complement(3937964..3939322) Mycobacterium avium 104 4528285 YP_882981.1 CDS coaD NC_008595.1 3939813 3940295 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(3939813..3940295) Mycobacterium avium 104 4529688 YP_882982.1 CDS MAV_3811 NC_008595.1 3940417 3940971 R identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095; methyltransferase complement(3940417..3940971) Mycobacterium avium 104 4529956 YP_882983.1 CDS MAV_3812 NC_008595.1 3940982 3941617 R identified by match to protein family HMM PF07884; integral membrane protein complement(3940982..3941617) Mycobacterium avium 104 4526648 YP_882984.1 CDS MAV_3813 NC_008595.1 3941614 3942381 R hypothetical protein complement(3941614..3942381) Mycobacterium avium 104 4529326 YP_882985.1 CDS MAV_3814 NC_008595.1 3942477 3943598 R identified by match to protein family HMM PF07859; alpha/beta hydrolase complement(3942477..3943598) Mycobacterium avium 104 4525844 YP_882986.1 CDS MAV_3815 NC_008595.1 3943777 3943929 D morphine 6-dehydrogenase 3943777..3943929 Mycobacterium avium 104 4529795 YP_882987.1 CDS MAV_3816 NC_008595.1 3943988 3944776 D identified by match to protein family HMM PF00248; 2,5-diketo-D-gluconic acid reductase A 3943988..3944776 Mycobacterium avium 104 4529210 YP_882988.1 CDS MAV_3817 NC_008595.1 3944780 3945496 R hypothetical protein complement(3944780..3945496) Mycobacterium avium 104 4528949 YP_882989.1 CDS recG NC_008595.1 3945493 3947709 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(3945493..3947709) Mycobacterium avium 104 4525766 YP_882990.1 CDS MAV_3819 NC_008595.1 3947712 3949439 R identified by match to protein family HMM PF02734; DAK2 domain-containing protein complement(3947712..3949439) Mycobacterium avium 104 4526577 YP_882991.1 CDS MAV_3821 NC_008595.1 3949998 3950537 D hypothetical protein 3949998..3950537 Mycobacterium avium 104 4529997 YP_882992.1 CDS rpmB NC_008595.1 3950666 3950860 D required for 70S ribosome assembly; 50S ribosomal protein L28 3950666..3950860 Mycobacterium avium 104 4527056 YP_882993.1 CDS MAV_3823 NC_008595.1 3950874 3951695 R identified by match to protein family HMM PF00106; carveol dehydrogenase complement(3950874..3951695) Mycobacterium avium 104 4527751 YP_882994.1 CDS MAV_3824 NC_008595.1 3951707 3952597 R identified by match to protein family HMM PF00106; dehydrogenase complement(3951707..3952597) Mycobacterium avium 104 4529549 YP_882995.1 CDS MAV_3825 NC_008595.1 3952682 3953125 D hypothetical protein 3952682..3953125 Mycobacterium avium 104 4525761 YP_882996.1 CDS MAV_3827 NC_008595.1 3954495 3955325 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase 3954495..3955325 Mycobacterium avium 104 4526903 YP_882997.1 CDS ung NC_008595.1 3955454 3956137 R Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase complement(3955454..3956137) Mycobacterium avium 104 4527132 YP_882998.1 CDS thiL NC_008595.1 3956190 3957137 R catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase complement(3956190..3957137) Mycobacterium avium 104 4525891 YP_882999.1 CDS MAV_3831 NC_008595.1 3957231 3957794 D hypothetical protein 3957231..3957794 Mycobacterium avium 104 4530559 YP_883000.1 CDS ddl NC_008595.1 3957791 3958900 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A complement(3957791..3958900) Mycobacterium avium 104 4526488 YP_883001.1 CDS ppk NC_008595.1 3960865 3963057 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 3960865..3963057 Mycobacterium avium 104 4530165 YP_883002.1 CDS MAV_3835 NC_008595.1 3963142 3964089 D identified by match to protein family HMM PF00293; match to protein family HMM PF00300; hydrolase, NUDIX family protein 3963142..3964089 Mycobacterium avium 104 4530194 YP_883003.1 CDS hup NC_008595.1 3964184 3964837 R identified by match to protein family HMM PF00216; DNA-binding protein HU complement(3964184..3964837) Mycobacterium avium 104 4527864 YP_883004.1 CDS leuD NC_008595.1 3965034 3965630 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit complement(3965034..3965630) Mycobacterium avium 104 4529988 YP_883005.1 CDS leuC NC_008595.1 3965656 3967086 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(3965656..3967086) Mycobacterium avium 104 4528870 YP_883006.1 CDS MAV_3839 NC_008595.1 3967212 3967874 D identified by match to protein family HMM PF01614; IclR family transcriptional regulator 3967212..3967874 Mycobacterium avium 104 4528726 YP_883007.1 CDS MAV_3840 NC_008595.1 3967978 3968490 D identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 3967978..3968490 Mycobacterium avium 104 4526245 YP_883008.1 CDS MAV_3844 NC_008595.1 3970363 3971169 R identified by match to protein family HMM PF01557; 5-carboxymethyl-2-hydroxymuconate delta-isomerase complement(3970363..3971169) Mycobacterium avium 104 4526560 YP_883009.1 CDS MAV_3846 NC_008595.1 3971269 3972660 D identified by match to protein family HMM PF07690; sugar transporter family protein 3971269..3972660 Mycobacterium avium 104 4529970 YP_883010.1 CDS leuB NC_008595.1 3972560 3973570 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(3972560..3973570) Mycobacterium avium 104 4526821 YP_883011.1 CDS serA NC_008595.1 3973620 3975206 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(3973620..3975206) Mycobacterium avium 104 4526828 YP_883012.1 CDS MAV_3848 NC_008595.1 3975236 3976663 D P49 protein 3975236..3976663 Mycobacterium avium 104 4530217 YP_883013.1 CDS wrbA NC_008595.1 3976660 3977259 D identified by match to protein family HMM PF00258; match to protein family HMM PF03358; match to protein family HMM TIGR01755; NAD(P)H:quinone oxidoreductase, type IV 3976660..3977259 Mycobacterium avium 104 4526391 YP_883014.1 CDS ilvC NC_008595.1 3977329 3978330 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(3977329..3978330) Mycobacterium avium 104 4527186 YP_883015.1 CDS ilvH NC_008595.1 3978393 3978899 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(3978393..3978899) Mycobacterium avium 104 4528193 YP_883016.1 CDS MAV_3853 NC_008595.1 3981093 3981440 D low molecular weight protein antigen 6 3981093..3981440 Mycobacterium avium 104 4528375 YP_883017.1 CDS MAV_3854 NC_008595.1 3981459 3982316 R identified by match to protein family HMM PF07681; DoxX subfamily protein, putative complement(3981459..3982316) Mycobacterium avium 104 4528906 YP_883018.1 CDS MAV_3855 NC_008595.1 3982608 3983678 D LppZ protein 3982608..3983678 Mycobacterium avium 104 4527045 YP_883019.1 CDS gatB NC_008595.1 3983769 3985280 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(3983769..3985280) Mycobacterium avium 104 4528937 YP_883020.1 CDS MAV_3857 NC_008595.1 3985291 3986418 R hypothetical protein complement(3985291..3986418) Mycobacterium avium 104 4529366 YP_883021.1 CDS MAV_3858 NC_008595.1 3986548 3987579 R catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase complement(3986548..3987579) Mycobacterium avium 104 4527251 YP_883022.1 CDS gatA NC_008595.1 3987621 3989102 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(3987621..3989102) Mycobacterium avium 104 4529082 YP_883023.1 CDS gatC NC_008595.1 3989099 3989395 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C complement(3989099..3989395) Mycobacterium avium 104 4530532 YP_883024.1 CDS MAV_3861 NC_008595.1 3989513 3990178 D identified by match to protein family HMM PF01842; ACT domain-containing protein 3989513..3990178 Mycobacterium avium 104 4529664 YP_883025.1 CDS MAV_3862 NC_008595.1 3990212 3990646 R hypothetical protein complement(3990212..3990646) Mycobacterium avium 104 4529766 YP_883026.1 CDS MAV_3863 NC_008595.1 3990695 3993613 R identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; MmpL4 protein complement(3990695..3993613) Mycobacterium avium 104 4529581 YP_883027.1 CDS MAV_3864 NC_008595.1 3993610 3994056 R identified by match to protein family HMM PF05423; MmpS4 protein complement(3993610..3994056) Mycobacterium avium 104 4527303 YP_883028.1 CDS MAV_3865 NC_008595.1 3994261 3994779 D identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 3994261..3994779 Mycobacterium avium 104 4525644 YP_883029.1 CDS MAV_3866 NC_008595.1 3994790 3995380 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(3994790..3995380) Mycobacterium avium 104 4526012 YP_883030.1 CDS MAV_3867 NC_008595.1 3995466 3996578 R catalyzes the formation of cysteine and 2-oxobutanoate from cystathionine; cystathionine gamma-lyase complement(3995466..3996578) Mycobacterium avium 104 4525880 YP_883031.1 CDS ligA NC_008595.1 3996583 3998664 R this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA complement(3996583..3998664) Mycobacterium avium 104 4527291 YP_883032.1 CDS MAV_3869 NC_008595.1 3998719 3999747 R identified by match to protein family HMM PF01717; methionine synthase, vitamin-B12 independent, putative complement(3998719..3999747) Mycobacterium avium 104 4526116 YP_883033.1 CDS mnmA NC_008595.1 4000497 4001555 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(4000497..4001555) Mycobacterium avium 104 4529783 YP_883034.1 CDS MAV_3872 NC_008595.1 4001574 4002752 R identified by match to protein family HMM PF00266; match to protein family HMM PF01212; cysteine desulfurase complement(4001574..4002752) Mycobacterium avium 104 4526303 YP_883035.1 CDS MAV_3873 NC_008595.1 4002786 4003667 R identified by match to protein family HMM PF01553; 1-acylglycerol-3-phosphate O-acyltransferase complement(4002786..4003667) Mycobacterium avium 104 4527995 YP_883036.1 CDS MAV_3874 NC_008595.1 4003730 4004575 R hypothetical protein complement(4003730..4004575) Mycobacterium avium 104 4527825 YP_883037.1 CDS MAV_3875 NC_008595.1 4004752 4005687 R identified by match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein, alpha subunit complement(4004752..4005687) Mycobacterium avium 104 4530436 YP_883038.1 CDS MAV_3876 NC_008595.1 4005748 4006539 R identified by match to protein family HMM PF01012; electron transfer protein, beta subunit complement(4005748..4006539) Mycobacterium avium 104 4526541 YP_883039.1 CDS MAV_3877 NC_008595.1 4006767 4007591 D hypothetical protein 4006767..4007591 Mycobacterium avium 104 4529265 YP_883040.1 CDS MAV_3878 NC_008595.1 4007588 4009192 D identified by match to protein family HMM PF03065; glycosyl hydrolase, family protein 57 4007588..4009192 Mycobacterium avium 104 4528281 YP_883041.1 CDS MAV_3879 NC_008595.1 4009209 4010465 D identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family protein 4009209..4010465 Mycobacterium avium 104 4527466 YP_883042.1 CDS MAV_3880 NC_008595.1 4010510 4011841 D identified by match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01777; nucleoside-diphosphate sugar epimerase 4010510..4011841 Mycobacterium avium 104 4526196 YP_883043.1 CDS MAV_3881 NC_008595.1 4011893 4012564 R hypothetical protein complement(4011893..4012564) Mycobacterium avium 104 4527769 YP_883044.1 CDS MAV_3882 NC_008595.1 4012641 4013375 R hypothetical protein complement(4012641..4013375) Mycobacterium avium 104 4530153 YP_883045.1 CDS MAV_3883 NC_008595.1 4013743 4014174 D identified by match to protein family HMM PF01740; stas domain-containing protein 4013743..4014174 Mycobacterium avium 104 4529587 YP_883046.1 CDS MAV_3884 NC_008595.1 4014409 4015587 D identified by match to protein family HMM PF00348; polyprenyl synthetase 4014409..4015587 Mycobacterium avium 104 4526105 YP_883047.1 CDS MAV_3885 NC_008595.1 4015610 4017136 D identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734; phytoene dehydrogenase 4015610..4017136 Mycobacterium avium 104 4526984 YP_883048.1 CDS MAV_3886 NC_008595.1 4017133 4018083 D identified by match to protein family HMM PF00494; phytoene synthase 4017133..4018083 Mycobacterium avium 104 4529483 YP_883049.1 CDS MAV_3887 NC_008595.1 4018035 4018403 D hypothetical protein 4018035..4018403 Mycobacterium avium 104 4527976 YP_883050.1 CDS MAV_3888 NC_008595.1 4018400 4018711 D lycopene cyclase 4018400..4018711 Mycobacterium avium 104 4530204 YP_883051.1 CDS MAV_3889 NC_008595.1 4018698 4019423 D identified by match to protein family HMM PF01209; methyltransferase, UbiE/COQ5 family protein 4018698..4019423 Mycobacterium avium 104 4526036 YP_883052.1 CDS MAV_3890 NC_008595.1 4019420 4020949 D identified by match to protein family HMM PF01266; match to protein family HMM PF01593; dehydrogenase 4019420..4020949 Mycobacterium avium 104 4528140 YP_883053.1 CDS MAV_3891 NC_008595.1 4020946 4021956 D identified by match to protein family HMM PF00355; methylesterase 4020946..4021956 Mycobacterium avium 104 4529968 YP_883054.1 CDS MAV_3892 NC_008595.1 4022024 4022350 D hypothetical protein 4022024..4022350 Mycobacterium avium 104 4529161 YP_883055.1 CDS MAV_3893 NC_008595.1 4022351 4022917 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 4022351..4022917 Mycobacterium avium 104 4527918 YP_883056.1 CDS fni NC_008595.1 4022959 4023993 R catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase complement(4022959..4023993) Mycobacterium avium 104 4530005 YP_883057.1 CDS MAV_3895 NC_008595.1 4024115 4026178 D identified by match to protein family HMM PF03176; MmpL family protein 4024115..4026178 Mycobacterium avium 104 4529090 YP_883058.1 CDS MAV_3896 NC_008595.1 4026175 4026447 D peripheral-type benzodiazepine receptor 4026175..4026447 Mycobacterium avium 104 4529395 YP_883059.1 CDS MAV_3897 NC_008595.1 4026460 4027788 D identified by match to protein family HMM PF00875; match to protein family HMM PF03441; Phr protein 4026460..4027788 Mycobacterium avium 104 4528824 YP_883060.1 CDS MAV_3898 NC_008595.1 4027875 4028612 R identified by match to protein family HMM PF00132; hexapeptide transferase complement(4027875..4028612) Mycobacterium avium 104 4527363 YP_883061.1 CDS MAV_3899 NC_008595.1 4028765 4030036 D hypothetical protein 4028765..4030036 Mycobacterium avium 104 4525633 YP_883062.1 CDS MAV_3900 NC_008595.1 4030260 4030433 D hypothetical protein 4030260..4030433 Mycobacterium avium 104 4526956 YP_883063.1 CDS MAV_3901 NC_008595.1 4030439 4031122 R immunogenic protein MPB64/MPT64 complement(4030439..4031122) Mycobacterium avium 104 4529158 YP_883064.1 CDS MAV_3902 NC_008595.1 4031195 4032370 R SAM-dependent methyltransferase complement(4031195..4032370) Mycobacterium avium 104 4528009 YP_883065.1 CDS MAV_3903 NC_008595.1 4032371 4033342 R identified by match to protein family HMM PF01209; methyltransferase, UbiE/COQ5 family protein complement(4032371..4033342) Mycobacterium avium 104 4528666 YP_883066.1 CDS MAV_3904 NC_008595.1 4033354 4034127 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(4033354..4034127) Mycobacterium avium 104 4528135 YP_883067.1 CDS MAV_3905 NC_008595.1 4034115 4034945 R identified by match to protein family HMM PF00293; hydrolase, nudix family protein, putative complement(4034115..4034945) Mycobacterium avium 104 4529934 YP_883068.1 CDS MAV_3906 NC_008595.1 4034942 4035784 R identified by match to protein family HMM PF00005; molybdenum ABC transporter ATPase complement(4034942..4035784) Mycobacterium avium 104 4530380 YP_883069.1 CDS serB NC_008595.1 4035849 4037084 R identified by match to protein family HMM PF00702; match to protein family HMM PF01842; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488; phosphoserine phosphatase SerB complement(4035849..4037084) Mycobacterium avium 104 4527445 YP_883070.1 CDS ctaD NC_008595.1 4037109 4038740 R identified by match to protein family HMM PF00115; match to protein family HMM TIGR02891; cytochrome C oxidase, subunit I complement(4037109..4038740) Mycobacterium avium 104 4528373 YP_883071.1 CDS MAV_3909 NC_008595.1 4038744 4039046 D hypothetical protein 4038744..4039046 Mycobacterium avium 104 4528988 YP_883072.1 CDS MAV_3910 NC_008595.1 4039043 4040125 D identified by match to protein family HMM PF01497; periplasmic binding protein 4039043..4040125 Mycobacterium avium 104 4526593 YP_883073.1 CDS MAV_3911 NC_008595.1 4040239 4041279 D identified by match to protein family HMM PF00107; NADP-dependent alcohol dehydrogenase c 4040239..4041279 Mycobacterium avium 104 4525580 YP_883074.1 CDS MAV_3912 NC_008595.1 4041290 4041703 R hypothetical protein complement(4041290..4041703) Mycobacterium avium 104 4526509 YP_883075.1 CDS nrdF NC_008595.1 4041784 4042758 R B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta complement(4041784..4042758) Mycobacterium avium 104 4529219 YP_883076.1 CDS MAV_3914 NC_008595.1 4042925 4043371 D hypothetical protein 4042925..4043371 Mycobacterium avium 104 4527587 YP_883077.1 CDS MAV_3916 NC_008595.1 4043355 4043900 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4043355..4043900 Mycobacterium avium 104 4529889 YP_883078.1 CDS MAV_3915 NC_008595.1 4043883 4045421 R flavin-containing monooxygenase FMO complement(4043883..4045421) Mycobacterium avium 104 4526205 YP_883079.1 CDS MAV_3917 NC_008595.1 4045578 4046327 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(4045578..4046327) Mycobacterium avium 104 4529289 YP_883080.1 CDS MAV_3918 NC_008595.1 4046321 4046458 R hypothetical protein complement(4046321..4046458) Mycobacterium avium 104 4530115 YP_883081.1 CDS MAV_3919 NC_008595.1 4046455 4048572 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(4046455..4048572) Mycobacterium avium 104 4529827 YP_883082.1 CDS nrdI NC_008595.1 4048590 4049042 R in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein complement(4048590..4049042) Mycobacterium avium 104 4530646 YP_883083.1 CDS MAV_3921 NC_008595.1 4049085 4049324 R identified by match to protein family HMM PF00462; match to protein family HMM PF05768; match to protein family HMM TIGR02194; glutaredoxin complement(4049085..4049324) Mycobacterium avium 104 4529246 YP_883084.1 CDS MAV_3922 NC_008595.1 4049855 4050385 R identified by match to protein family HMM PF03358; secreted protein complement(4049855..4050385) Mycobacterium avium 104 4526085 YP_883085.1 CDS MAV_3923 NC_008595.1 4050503 4051117 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4050503..4051117 Mycobacterium avium 104 4530422 YP_883086.1 CDS MAV_3925 NC_008595.1 4051132 4052160 D involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 4051132..4052160 Mycobacterium avium 104 4525913 YP_883087.1 CDS MAV_3924 NC_008595.1 4052095 4053027 R identified by match to protein family HMM PF00106; short chain dehydrogenase complement(4052095..4053027) Mycobacterium avium 104 4527490 YP_883088.1 CDS MAV_3926 NC_008595.1 4053059 4053694 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(4053059..4053694) Mycobacterium avium 104 4530465 YP_883089.1 CDS MAV_3927 NC_008595.1 4053811 4055289 D identified by match to protein family HMM PF00067; cytochrome p450 4053811..4055289 Mycobacterium avium 104 4529457 YP_883090.1 CDS MAV_3928 NC_008595.1 4055329 4055853 R hypothetical protein complement(4055329..4055853) Mycobacterium avium 104 4527498 YP_883091.1 CDS MAV_3929 NC_008595.1 4056155 4056343 D hypothetical protein 4056155..4056343 Mycobacterium avium 104 4526265 YP_883092.1 CDS MAV_3930 NC_008595.1 4056825 4056959 D hypothetical protein 4056825..4056959 Mycobacterium avium 104 4530053 YP_883093.1 CDS MAV_3931 NC_008595.1 4057012 4058004 R regulator of Sig8 complement(4057012..4058004) Mycobacterium avium 104 4529146 YP_883094.1 CDS MAV_3932 NC_008595.1 4058101 4059558 R identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator complement(4058101..4059558) Mycobacterium avium 104 4530122 YP_883095.1 CDS MAV_3934 NC_008595.1 4060825 4061160 D identified by match to protein family HMM PF01796; hypothetical protein 4060825..4061160 Mycobacterium avium 104 4530390 YP_883096.1 CDS MAV_3935 NC_008595.1 4061186 4063351 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; acyl-CoA dehydrogenase complement(4061186..4063351) Mycobacterium avium 104 4530297 YP_883097.1 CDS MAV_3936 NC_008595.1 4063463 4064221 R identified by match to protein family HMM PF00106; 3-hydroxyacyl-CoA dehydrogenase type-2 complement(4063463..4064221) Mycobacterium avium 104 4526119 YP_883098.1 CDS ligB NC_008595.1 4064305 4065885 D catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase 4064305..4065885 Mycobacterium avium 104 4530527 YP_883099.1 CDS MAV_3938 NC_008595.1 4065935 4068211 D identified by match to protein family HMM PF02554; carbon starvation protein A 4065935..4068211 Mycobacterium avium 104 4530557 YP_883100.1 CDS MAV_3939 NC_008595.1 4068221 4069738 D identified by match to protein family HMM PF00012; DnaK family protein 4068221..4069738 Mycobacterium avium 104 4526187 YP_883101.1 CDS MAV_3941 NC_008595.1 4070716 4070916 R sensor protein AtoS complement(4070716..4070916) Mycobacterium avium 104 4528556 YP_883102.1 CDS MAV_3942 NC_008595.1 4070935 4071717 D identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 4070935..4071717 Mycobacterium avium 104 4528181 YP_883103.1 CDS MAV_3944 NC_008595.1 4071742 4073037 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4071742..4073037 Mycobacterium avium 104 4529241 YP_883104.1 CDS MAV_3943 NC_008595.1 4073034 4073717 R hypothetical protein complement(4073034..4073717) Mycobacterium avium 104 4528850 YP_883105.1 CDS MAV_3945 NC_008595.1 4073899 4074144 D hypothetical protein 4073899..4074144 Mycobacterium avium 104 4530136 YP_883106.1 CDS MAV_3946 NC_008595.1 4074148 4075122 R identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein, putative complement(4074148..4075122) Mycobacterium avium 104 4526973 YP_883107.1 CDS MAV_3947 NC_008595.1 4075119 4075925 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; NAD dependent epimerase/dehydratase complement(4075119..4075925) Mycobacterium avium 104 4525605 YP_883108.1 CDS MAV_3948 NC_008595.1 4076004 4076921 R hypothetical protein complement(4076004..4076921) Mycobacterium avium 104 4527818 YP_883109.1 CDS MAV_3949 NC_008595.1 4076964 4077308 D identified by similarity to SP:Q57225; match to protein family HMM PF00893; transporter, small multidrug resistance (SMR) family protein 4076964..4077308 Mycobacterium avium 104 4527992 YP_883110.1 CDS MAV_3950 NC_008595.1 4077403 4078782 D hypothetical protein 4077403..4078782 Mycobacterium avium 104 4527492 YP_883111.1 CDS MAV_3951 NC_008595.1 4078814 4078999 D hypothetical protein 4078814..4078999 Mycobacterium avium 104 4530120 YP_883112.1 CDS MAV_3952 NC_008595.1 4078992 4079417 D hypothetical protein 4078992..4079417 Mycobacterium avium 104 4528279 YP_883113.1 CDS MAV_3953 NC_008595.1 4079590 4080006 D identified by match to protein family HMM PF05423; MmpS2 protein 4079590..4080006 Mycobacterium avium 104 4528079 YP_883114.1 CDS MAV_3955 NC_008595.1 4082893 4084374 D identified by match to protein family HMM PF00005; ABC transporter 4082893..4084374 Mycobacterium avium 104 4529669 YP_883115.1 CDS MAV_3956 NC_008595.1 4084419 4085774 D identified by match to protein family HMM PF00005; match to protein family HMM PF02361; cobalt transport protein, putative 4084419..4085774 Mycobacterium avium 104 4526442 YP_883116.1 CDS MAV_3957 NC_008595.1 4085783 4087063 R identified by match to protein family HMM PF00113; match to protein family HMM PF03952; enolase complement(4085783..4087063) Mycobacterium avium 104 4525928 YP_883117.1 CDS pcaC NC_008595.1 4087148 4087705 R identified by match to protein family HMM PF02627; hypothetical protein complement(4087148..4087705) Mycobacterium avium 104 4529586 YP_883118.1 CDS MAV_3959 NC_008595.1 4087707 4088552 R identified by match to protein family HMM PF02668; taurine catabolism dioxygenase TauD, TfdA family protein complement(4087707..4088552) Mycobacterium avium 104 4527258 YP_883119.1 CDS MAV_3960 NC_008595.1 4088598 4088936 R hypothetical protein complement(4088598..4088936) Mycobacterium avium 104 4529619 YP_883120.1 CDS MAV_3961 NC_008595.1 4088933 4090195 R identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein complement(4088933..4090195) Mycobacterium avium 104 4527370 YP_883121.1 CDS MAV_3962 NC_008595.1 4090192 4090950 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase:short chain dehydrogenase/reductase SDR complement(4090192..4090950) Mycobacterium avium 104 4525504 YP_883122.1 CDS MAV_3963 NC_008595.1 4090947 4091768 R identified by match to protein family HMM PF00111; match to protein family HMM PF00175; 2Fe-2S iron-sulfur cluster binding domain-containing protein complement(4090947..4091768) Mycobacterium avium 104 4528656 YP_883123.1 CDS MAV_3964 NC_008595.1 4091835 4092287 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(4091835..4092287) Mycobacterium avium 104 4527048 YP_883124.1 CDS MAV_3966 NC_008595.1 4093543 4093878 R hypothetical protein complement(4093543..4093878) Mycobacterium avium 104 4526906 YP_883125.1 CDS MAV_3967 NC_008595.1 4093875 4095143 R identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein complement(4093875..4095143) Mycobacterium avium 104 4530628 YP_883126.1 CDS MAV_3969 NC_008595.1 4095308 4096750 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase 4095308..4096750 Mycobacterium avium 104 4527080 YP_883127.1 CDS MAV_3968 NC_008595.1 4096747 4096941 R long chain fatty acid-CoA synthetase Faa4p complement(4096747..4096941) Mycobacterium avium 104 4528397 YP_883128.1 CDS MAV_3970 NC_008595.1 4097240 4097383 D hypothetical protein 4097240..4097383 Mycobacterium avium 104 4529110 YP_883129.1 CDS MAV_3971 NC_008595.1 4097430 4097813 R identified by match to protein family HMM PF05012; match to protein family HMM TIGR01550; death-on-curing protein complement(4097430..4097813) Mycobacterium avium 104 4529415 YP_883130.1 CDS MAV_3972 NC_008595.1 4097810 4097941 R hypothetical protein complement(4097810..4097941) Mycobacterium avium 104 4528508 YP_883131.1 CDS MAV_3974 NC_008595.1 4098224 4099405 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; permease of the major facilitator superfamily protein complement(4098224..4099405) Mycobacterium avium 104 4528846 YP_883132.1 CDS MAV_3976 NC_008595.1 4101242 4101640 D may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 4101242..4101640 Mycobacterium avium 104 4530668 YP_883133.1 CDS MAV_3977 NC_008595.1 4101637 4102005 D may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 4101637..4102005 Mycobacterium avium 104 4529932 YP_883134.1 CDS MAV_3978 NC_008595.1 4102016 4102642 R hypothetical protein complement(4102016..4102642) Mycobacterium avium 104 4529328 YP_883135.1 CDS MAV_3979 NC_008595.1 4102664 4102996 R identified by match to protein family HMM PF04343; hypothetical protein complement(4102664..4102996) Mycobacterium avium 104 4527622 YP_883136.1 CDS MAV_3980 NC_008595.1 4103089 4104348 D hypothetical protein 4103089..4104348 Mycobacterium avium 104 4526262 YP_883137.1 CDS MAV_3981 NC_008595.1 4104353 4105273 R identified by match to protein family HMM PF03328; HpcH/HpaI aldolase/citrate lyase, putative complement(4104353..4105273) Mycobacterium avium 104 4525509 YP_883138.1 CDS MAV_3982 NC_008595.1 4105557 4106120 D identified by match to protein family HMM PF01814; hemerythrin HHE cation binding domain-containing protein 4105557..4106120 Mycobacterium avium 104 4527735 YP_883139.1 CDS MAV_3983 NC_008595.1 4106156 4107631 D identified by match to protein family HMM PF02696; hypothetical protein 4106156..4107631 Mycobacterium avium 104 4530364 YP_883140.1 CDS MAV_3984 NC_008595.1 4107639 4108046 R hypothetical protein complement(4107639..4108046) Mycobacterium avium 104 4528304 YP_883141.1 CDS MAV_3985 NC_008595.1 4108105 4108377 R hypothetical protein complement(4108105..4108377) Mycobacterium avium 104 4529950 YP_883142.1 CDS MAV_3986 NC_008595.1 4108392 4108988 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(4108392..4108988) Mycobacterium avium 104 4530701 YP_883143.1 CDS MAV_3987 NC_008595.1 4109086 4110090 D hypothetical protein 4109086..4110090 Mycobacterium avium 104 4529327 YP_883144.1 CDS MAV_3988 NC_008595.1 4110100 4110495 R identified by match to protein family HMM PF05305; hypothetical protein complement(4110100..4110495) Mycobacterium avium 104 4525746 YP_883145.1 CDS MAV_3989 NC_008595.1 4110487 4111947 D identified by match to protein family HMM PF00614; phospholipase D family protein 4110487..4111947 Mycobacterium avium 104 4529646 YP_883146.1 CDS MAV_3990 NC_008595.1 4112027 4112890 D identified by match to protein family HMM PF05721; phytanoyl-CoA dioxygenase (PhyH) family protein 4112027..4112890 Mycobacterium avium 104 4527072 YP_883147.1 CDS MAV_3991 NC_008595.1 4112908 4114353 R identified by match to protein family HMM PF00144; beta-lactamase complement(4112908..4114353) Mycobacterium avium 104 4529848 YP_883148.1 CDS MAV_3993 NC_008595.1 4115131 4115637 D hypothetical protein 4115131..4115637 Mycobacterium avium 104 4528190 YP_883149.1 CDS MAV_3994 NC_008595.1 4115744 4116814 D glycosyltransferase GtfB 4115744..4116814 Mycobacterium avium 104 4528526 YP_883150.1 CDS MAV_3995 NC_008595.1 4116819 4117544 R hypothetical protein complement(4116819..4117544) Mycobacterium avium 104 4527429 YP_883151.1 CDS MAV_3996 NC_008595.1 4118271 4119545 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(4118271..4119545) Mycobacterium avium 104 4528690 YP_883152.1 CDS MAV_3997 NC_008595.1 4119594 4119902 R hypothetical protein complement(4119594..4119902) Mycobacterium avium 104 4526440 YP_883153.1 CDS MAV_4000 NC_008595.1 4121466 4122212 R identified by match to protein family HMM PF00892; hypothetical protein complement(4121466..4122212) Mycobacterium avium 104 4526021 YP_883154.1 CDS MAV_4001 NC_008595.1 4122305 4122466 R SsrA-binding protein complement(4122305..4122466) Mycobacterium avium 104 4525568 YP_883155.1 CDS MAV_4002 NC_008595.1 4122817 4123710 R identified by match to protein family HMM PF02687; efflux ABC transporter permease complement(4122817..4123710) Mycobacterium avium 104 4529422 YP_883156.1 CDS ftsE NC_008595.1 4123711 4124403 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR00960; match to protein family HMM TIGR02673; cell division ATP-binding protein FtsE complement(4123711..4124403) Mycobacterium avium 104 4528454 YP_883157.1 CDS MAV_4004 NC_008595.1 4124445 4124945 R hypothetical protein complement(4124445..4124945) Mycobacterium avium 104 4525665 YP_883158.1 CDS MAV_4005 NC_008595.1 4124942 4125820 R identified by match to protein family HMM PF00924; transporter, small conductance mechanosensitive ion channel (MscS) family protein complement(4124942..4125820) Mycobacterium avium 104 4529512 YP_883159.1 CDS prfB NC_008595.1 4125927 4127039 R recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 complement(4125927..4127039) Mycobacterium avium 104 4529477 YP_883160.1 CDS MAV_4007 NC_008595.1 4127212 4128579 D NADPH-ferredoxin reductase fpra 4127212..4128579 Mycobacterium avium 104 4529538 YP_883161.1 CDS MAV_4009 NC_008595.1 4128651 4129082 D hypothetical protein 4128651..4129082 Mycobacterium avium 104 4529728 YP_883162.1 CDS MAV_4008 NC_008595.1 4129024 4129488 R hypothetical protein complement(4129024..4129488) Mycobacterium avium 104 4530362 YP_883163.1 CDS MAV_4010 NC_008595.1 4129508 4130266 R hypothetical protein complement(4129508..4130266) Mycobacterium avium 104 4528826 YP_883164.1 CDS MAV_4011 NC_008595.1 4130607 4132850 D nitric-oxide reductase subunit B 4130607..4132850 Mycobacterium avium 104 4528543 YP_883165.1 CDS MAV_4012 NC_008595.1 4132854 4133480 D hypothetical protein 4132854..4133480 Mycobacterium avium 104 4529122 YP_883166.1 CDS MAV_4013 NC_008595.1 4133477 4134274 D identified by match to protein family HMM PF01145; SPFH domain-containing protein/band 7 family protein 4133477..4134274 Mycobacterium avium 104 4527799 YP_883167.1 CDS MAV_4014 NC_008595.1 4134717 4135892 D identified by match to protein family HMM PF00823; PPE family protein 4134717..4135892 Mycobacterium avium 104 4527568 YP_883168.1 CDS MAV_4015 NC_008595.1 4135989 4137077 D identified by match to protein family HMM PF00823; PPE family protein 4135989..4137077 Mycobacterium avium 104 4527003 YP_883169.1 CDS MAV_4016 NC_008595.1 4137081 4137434 R hypothetical protein complement(4137081..4137434) Mycobacterium avium 104 4529529 YP_883170.1 CDS MAV_4017 NC_008595.1 4137511 4138290 D identified by match to protein family HMM PF00459; match to protein family HMM TIGR02067; inositol monophosphatase 4137511..4138290 Mycobacterium avium 104 4530273 YP_883171.1 CDS MAV_4018 NC_008595.1 4138376 4139767 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4138376..4139767 Mycobacterium avium 104 4527820 YP_883172.1 CDS MAV_4019 NC_008595.1 4139803 4141008 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4139803..4141008 Mycobacterium avium 104 4530670 YP_883173.1 CDS MAV_4020 NC_008595.1 4141039 4141155 D hypothetical protein 4141039..4141155 Mycobacterium avium 104 4526001 YP_883174.1 CDS MAV_4021 NC_008595.1 4141178 4142149 D identified by match to protein family HMM PF00107; zinc-binding dehydrogenase 4141178..4142149 Mycobacterium avium 104 4530154 YP_883175.1 CDS hmgA NC_008595.1 4142257 4143351 D identified by match to protein family HMM PF04209; homogentisate 1,2-dioxygenase 4142257..4143351 Mycobacterium avium 104 4526737 YP_883176.1 CDS MAV_4023 NC_008595.1 4143351 4144526 D hypothetical protein 4143351..4144526 Mycobacterium avium 104 4528999 YP_883177.1 CDS MAV_4024 NC_008595.1 4144523 4145737 D identified by match to protein family HMM PF02515; caib/baif family protein 4144523..4145737 Mycobacterium avium 104 4530570 YP_883178.1 CDS MAV_4025 NC_008595.1 4145746 4146639 D identified by match to protein family HMM PF00682; pyruvate carboxyltransferase 4145746..4146639 Mycobacterium avium 104 4526476 YP_883179.1 CDS MAV_4026 NC_008595.1 4146654 4147265 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4146654..4147265 Mycobacterium avium 104 4525641 YP_883180.1 CDS MAV_4027 NC_008595.1 4147276 4148514 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4147276..4148514 Mycobacterium avium 104 4529659 YP_883181.1 CDS MAV_4028 NC_008595.1 4148514 4149512 D identified by match to protein family HMM PF01636; aminoglycoside phosphotransferase 4148514..4149512 Mycobacterium avium 104 4526206 YP_883182.1 CDS MAV_4029 NC_008595.1 4149512 4149850 D hypothetical protein 4149512..4149850 Mycobacterium avium 104 4526474 YP_883183.1 CDS MAV_4031 NC_008595.1 4150310 4150837 D identified by match to protein family HMM PF04264; YceI like family protein 4150310..4150837 Mycobacterium avium 104 4526515 YP_883184.1 CDS MAV_4032 NC_008595.1 4150899 4151312 D two-component system response regulator 4150899..4151312 Mycobacterium avium 104 4529131 YP_883185.1 CDS nuoA NC_008595.1 4151467 4151931 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 4151467..4151931 Mycobacterium avium 104 4530166 YP_883186.1 CDS MAV_4034 NC_008595.1 4151957 4152511 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 4151957..4152511 Mycobacterium avium 104 4527457 YP_883187.1 CDS MAV_4035 NC_008595.1 4152508 4153215 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 4152508..4153215 Mycobacterium avium 104 4528724 YP_883188.1 CDS nuoD NC_008595.1 4153215 4154540 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 4153215..4154540 Mycobacterium avium 104 4529715 YP_883189.1 CDS MAV_4037 NC_008595.1 4154537 4155295 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 4154537..4155295 Mycobacterium avium 104 4527329 YP_883190.1 CDS nuoF NC_008595.1 4155292 4156653 D identified by match to protein family HMM PF01512; match to protein family HMM TIGR01959; NADH-quinone oxidoreductase, F subunit 4155292..4156653 Mycobacterium avium 104 4526687 YP_883191.1 CDS MAV_4039 NC_008595.1 4156680 4159061 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 4156680..4159061 Mycobacterium avium 104 4530092 YP_883192.1 CDS MAV_4040 NC_008595.1 4159058 4160314 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 4159058..4160314 Mycobacterium avium 104 4529798 YP_883193.1 CDS MAV_4041 NC_008595.1 4160326 4160871 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 4160326..4160871 Mycobacterium avium 104 4528095 YP_883194.1 CDS MAV_4042 NC_008595.1 4160868 4161692 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 4160868..4161692 Mycobacterium avium 104 4527516 YP_883195.1 CDS nuoK NC_008595.1 4161689 4161988 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 4161689..4161988 Mycobacterium avium 104 4530791 YP_883196.1 CDS MAV_4044 NC_008595.1 4161963 4163885 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 4161963..4163885 Mycobacterium avium 104 4528149 YP_883197.1 CDS MAV_4045 NC_008595.1 4163882 4165450 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 4163882..4165450 Mycobacterium avium 104 4527087 YP_883198.1 CDS MAV_4047 NC_008595.1 4165447 4167030 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 4165447..4167030 Mycobacterium avium 104 4529802 YP_883199.1 CDS MAV_4046 NC_008595.1 4166957 4167649 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(4166957..4167649) Mycobacterium avium 104 4529630 YP_883200.1 CDS MAV_4048 NC_008595.1 4167728 4168558 D identified by match to protein family HMM PF02409; Omt protein 4167728..4168558 Mycobacterium avium 104 4527613 YP_883201.1 CDS MAV_4049 NC_008595.1 4168616 4169068 R hypothetical protein complement(4168616..4169068) Mycobacterium avium 104 4528911 YP_883202.1 CDS MAV_4050 NC_008595.1 4169061 4170176 R identified by match to protein family HMM PF01882; hypothetical protein complement(4169061..4170176) Mycobacterium avium 104 4527699 YP_883203.1 CDS MAV_4051 NC_008595.1 4170203 4170319 R hypothetical protein complement(4170203..4170319) Mycobacterium avium 104 4530254 YP_883204.1 CDS MAV_4052 NC_008595.1 4170327 4171241 R identified by match to protein family HMM PF07726; match to protein family HMM PF07728; ATPase complement(4170327..4171241) Mycobacterium avium 104 4530612 YP_883205.1 CDS MAV_4053 NC_008595.1 4171324 4171794 R hypothetical protein complement(4171324..4171794) Mycobacterium avium 104 4526610 YP_883206.1 CDS MAV_4054 NC_008595.1 4171803 4172765 R hypothetical protein complement(4171803..4172765) Mycobacterium avium 104 4526582 YP_883207.1 CDS MAV_4055 NC_008595.1 4172936 4174318 D identified by match to protein family HMM PF02720; hypothetical protein 4172936..4174318 Mycobacterium avium 104 4529049 YP_883208.1 CDS MAV_4056 NC_008595.1 4174536 4175921 R identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase complement(4174536..4175921) Mycobacterium avium 104 4527640 YP_883209.1 CDS MAV_4057 NC_008595.1 4175918 4176520 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(4175918..4176520) Mycobacterium avium 104 4527221 YP_883210.1 CDS MAV_4058 NC_008595.1 4176578 4177711 D identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein 4176578..4177711 Mycobacterium avium 104 4528022 YP_883211.1 CDS MAV_4060 NC_008595.1 4177711 4178826 D hypothetical protein 4177711..4178826 Mycobacterium avium 104 4529346 YP_883212.1 CDS MAV_4059 NC_008595.1 4178809 4181499 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; monoxygenase complement(4178809..4181499) Mycobacterium avium 104 4526183 YP_883213.1 CDS MAV_4062 NC_008595.1 4181633 4182979 D identified by match to protein family HMM PF01266; match to protein family HMM PF01593; flavin-containing monoamine oxidase AofH 4181633..4182979 Mycobacterium avium 104 4530155 YP_883214.1 CDS MAV_4061 NC_008595.1 4182974 4183924 R identified by match to protein family HMM PF00561; alpha/beta hydrolase complement(4182974..4183924) Mycobacterium avium 104 4527135 YP_883215.1 CDS MAV_4063 NC_008595.1 4184042 4185118 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(4184042..4185118) Mycobacterium avium 104 4528450 YP_883216.1 CDS MAV_4064 NC_008595.1 4185153 4186325 R identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family protein complement(4185153..4186325) Mycobacterium avium 104 4526047 YP_883217.1 CDS cheB NC_008595.1 4186462 4187379 D identified by match to protein family HMM PF01339; protein-glutamate methylesterase CheB 4186462..4187379 Mycobacterium avium 104 4528379 YP_883218.1 CDS cheR NC_008595.1 4187376 4189226 R identified by match to protein family HMM PF00989; match to protein family HMM PF01739; match to protein family HMM PF03705; match to protein family HMM TIGR00229; CheR methyltransferase SAM binding domain-containing protein complement(4187376..4189226) Mycobacterium avium 104 4525643 YP_883219.1 CDS MAV_4067 NC_008595.1 4189279 4190037 R identified by match to protein family HMM PF01740; stas domain-containing protein complement(4189279..4190037) Mycobacterium avium 104 4528468 YP_883220.1 CDS katE NC_008595.1 4191134 4193299 D identified by similarity to SP:P21179; match to protein family HMM PF00199; match to protein family HMM PF01965; match to protein family HMM PF06628; catalase HPII 4191134..4193299 Mycobacterium avium 104 4530700 YP_883221.1 CDS MAV_4070 NC_008595.1 4193389 4193646 D hypothetical protein 4193389..4193646 Mycobacterium avium 104 4527916 YP_883222.1 CDS MAV_4071 NC_008595.1 4193651 4194226 R hypothetical protein complement(4193651..4194226) Mycobacterium avium 104 4529519 YP_883223.1 CDS MAV_4072 NC_008595.1 4194377 4194544 D hypothetical protein 4194377..4194544 Mycobacterium avium 104 4525834 YP_883224.1 CDS MAV_4073 NC_008595.1 4194541 4195494 D dehydrogenase 4194541..4195494 Mycobacterium avium 104 4530049 YP_883225.1 CDS MAV_4074 NC_008595.1 4195491 4196258 D identified by match to protein family HMM PF02585; GlcNAc-PI de-N-acetylase 4195491..4196258 Mycobacterium avium 104 4530223 YP_883226.1 CDS MAV_4076 NC_008595.1 4196327 4197085 D identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase 4196327..4197085 Mycobacterium avium 104 4530543 YP_883227.1 CDS MAV_4075 NC_008595.1 4197049 4197360 R hypothetical protein complement(4197049..4197360) Mycobacterium avium 104 4526151 YP_883228.1 CDS MAV_4077 NC_008595.1 4197504 4197740 R hypothetical protein complement(4197504..4197740) Mycobacterium avium 104 4529402 YP_883229.1 CDS MAV_4078 NC_008595.1 4197965 4198822 D hypothetical protein 4197965..4198822 Mycobacterium avium 104 4525965 YP_883230.1 CDS MAV_4079 NC_008595.1 4199055 4199453 D hypothetical protein 4199055..4199453 Mycobacterium avium 104 4526914 YP_883231.1 CDS MAV_4081 NC_008595.1 4201011 4201937 D transferase 4201011..4201937 Mycobacterium avium 104 4529736 YP_883232.1 CDS MAV_4082 NC_008595.1 4201955 4203175 D identified by match to protein family HMM PF00534; transferase 4201955..4203175 Mycobacterium avium 104 4526961 YP_883233.1 CDS MAV_4083 NC_008595.1 4203185 4204057 R identified by match to protein family HMM PF00535; transferase complement(4203185..4204057) Mycobacterium avium 104 4529354 YP_883234.1 CDS MAV_4084 NC_008595.1 4204047 4205132 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; UDP-glucuronic acid decarboxylase 1 4204047..4205132 Mycobacterium avium 104 4525995 YP_883235.1 CDS MAV_4085 NC_008595.1 4205144 4206784 D identified by match to protein family HMM PF02543; transferase 4205144..4206784 Mycobacterium avium 104 4527675 YP_883236.1 CDS MAV_4086 NC_008595.1 4206781 4208271 D identified by match to protein family HMM PF00535; match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; match to protein family HMM TIGR01656; match to protein family HMM TIGR01662; transferase 4206781..4208271 Mycobacterium avium 104 4530560 YP_883237.1 CDS MAV_4087 NC_008595.1 4208280 4209299 D identified by match to protein family HMM PF01075; transferase 4208280..4209299 Mycobacterium avium 104 4529775 YP_883238.1 CDS gmhA NC_008595.1 4209296 4209865 D identified by match to protein family HMM TIGR00441; phosphoheptose isomerase 4209296..4209865 Mycobacterium avium 104 4527142 YP_883239.1 CDS MAV_4090 NC_008595.1 4211285 4211980 D identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 4211285..4211980 Mycobacterium avium 104 4526026 YP_883240.1 CDS MAV_4091 NC_008595.1 4211971 4212936 D identified by match to protein family HMM PF01075; transferase 4211971..4212936 Mycobacterium avium 104 4530060 YP_883241.1 CDS MAV_4092 NC_008595.1 4212933 4214237 D identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; UDP-glucose 6-dehydrogenase 4212933..4214237 Mycobacterium avium 104 4529713 YP_883242.1 CDS MAV_4093 NC_008595.1 4214464 4216257 D catalyzes the formation of acetate from pyruvate; thiamine pyrophosphate protein 4214464..4216257 Mycobacterium avium 104 4525811 YP_883243.1 CDS MAV_4094 NC_008595.1 4216268 4216933 R identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758; uracil DNA glycosylase complement(4216268..4216933) Mycobacterium avium 104 4529943 YP_883244.1 CDS MAV_4095 NC_008595.1 4216998 4217558 R identified by match to protein family HMM PF01814; hemerythrin HHE cation binding domain-containing protein complement(4216998..4217558) Mycobacterium avium 104 4526642 YP_883245.1 CDS MAV_4096 NC_008595.1 4217725 4218771 D hypothetical protein 4217725..4218771 Mycobacterium avium 104 4525637 YP_883246.1 CDS MAV_4097 NC_008595.1 4218854 4219855 D PknJ protein 4218854..4219855 Mycobacterium avium 104 4530439 YP_883247.1 CDS MAV_4098 NC_008595.1 4219888 4220862 D identified by match to protein family HMM PF00248; aldo/keto reductase 4219888..4220862 Mycobacterium avium 104 4529936 YP_883248.1 CDS MAV_4099 NC_008595.1 4220881 4221648 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; NAD dependent epimerase/dehydratase complement(4220881..4221648) Mycobacterium avium 104 4526753 YP_883249.1 CDS glgX NC_008595.1 4221753 4223903 R identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02100; glycogen debranching enzyme GlgX complement(4221753..4223903) Mycobacterium avium 104 4530078 YP_883250.1 CDS MAV_4101 NC_008595.1 4223997 4225178 R identified by match to protein family HMM PF00107; S-(hydroxymethyl)glutathione dehydrogenase complement(4223997..4225178) Mycobacterium avium 104 4527391 YP_883251.1 CDS MAV_4102 NC_008595.1 4225346 4226053 R identified by match to protein family HMM PF03861; ANTAR domain-containing protein complement(4225346..4226053) Mycobacterium avium 104 4529754 YP_883252.1 CDS MAV_4103 NC_008595.1 4226395 4227687 D identified by match to protein family HMM PF00070; match to protein family HMM PF07992; dehydrogenase 4226395..4227687 Mycobacterium avium 104 4525685 YP_883253.1 CDS MAV_4104 NC_008595.1 4227700 4228236 R identified by match to protein family HMM PF07098; hypothetical protein complement(4227700..4228236) Mycobacterium avium 104 4528342 YP_883254.1 CDS MAV_4105 NC_008595.1 4228311 4228673 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(4228311..4228673) Mycobacterium avium 104 4530171 YP_883255.1 CDS MAV_4106 NC_008595.1 4228825 4229268 D identified by match to protein family HMM PF00011; Hsp20/alpha crystallin family protein 4228825..4229268 Mycobacterium avium 104 4527149 YP_883256.1 CDS MAV_4107 NC_008595.1 4229394 4230077 D identified by match to protein family HMM PF03861; ANTAR domain-containing protein 4229394..4230077 Mycobacterium avium 104 4527586 YP_883257.1 CDS MAV_4108 NC_008595.1 4230105 4231760 R identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730; GAF family protein complement(4230105..4231760) Mycobacterium avium 104 4527593 YP_883258.1 CDS MAV_4109 NC_008595.1 4231757 4232425 R identified by match to protein family HMM PF00072; match to protein family HMM PF00196; DevR family transcriptional regulator complement(4231757..4232425) Mycobacterium avium 104 4529803 YP_883259.1 CDS MAV_4110 NC_008595.1 4232639 4233055 D identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 4232639..4233055 Mycobacterium avium 104 4529534 YP_883260.1 CDS MAV_4111 NC_008595.1 4233056 4234030 R hypothetical protein complement(4233056..4234030) Mycobacterium avium 104 4529199 YP_883261.1 CDS MAV_4112 NC_008595.1 4234172 4235332 D identified by match to protein family HMM PF02518; hypothetical protein 4234172..4235332 Mycobacterium avium 104 4525674 YP_883262.1 CDS MAV_4114 NC_008595.1 4235322 4235987 D identified by match to protein family HMM PF00072; match to protein family HMM PF00196; response regulator receiver domain-containing protein 4235322..4235987 Mycobacterium avium 104 4526169 YP_883263.1 CDS MAV_4113 NC_008595.1 4235951 4237273 R hypothetical protein complement(4235951..4237273) Mycobacterium avium 104 4527920 YP_883264.1 CDS MAV_4115 NC_008595.1 4237406 4237696 R identified by match to protein family HMM PF05360; hypothetical protein complement(4237406..4237696) Mycobacterium avium 104 4529600 YP_883265.1 CDS MAV_4116 NC_008595.1 4237742 4239025 R hypothetical protein complement(4237742..4239025) Mycobacterium avium 104 4528083 YP_883266.1 CDS MAV_4117 NC_008595.1 4239119 4240174 D hypothetical protein 4239119..4240174 Mycobacterium avium 104 4526217 YP_883267.1 CDS MAV_4118 NC_008595.1 4240222 4241400 R identified by match to protein family HMM PF00999; transporter, monovalent cation:proton antiporter-2 (CPA2) family protein complement(4240222..4241400) Mycobacterium avium 104 4526487 YP_883268.1 CDS MAV_4119 NC_008595.1 4241448 4242530 R identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; oxidoreductase complement(4241448..4242530) Mycobacterium avium 104 4527310 YP_883269.1 CDS MAV_4120 NC_008595.1 4242533 4243462 R identified by match to protein family HMM PF00561; alpha/beta hydrolase complement(4242533..4243462) Mycobacterium avium 104 4526137 YP_883270.1 CDS MAV_4121 NC_008595.1 4243465 4244373 R FF domain-containing protein complement(4243465..4244373) Mycobacterium avium 104 4527009 YP_883271.1 CDS MAV_4122 NC_008595.1 4244404 4247655 R identified by match to protein family HMM PF00501; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746; AMP-binding enzyme complement(4244404..4247655) Mycobacterium avium 104 4526372 YP_883272.1 CDS MAV_4123 NC_008595.1 4248128 4249159 R hypothetical protein complement(4248128..4249159) Mycobacterium avium 104 4530348 YP_883273.1 CDS MAV_4124 NC_008595.1 4249346 4251256 D identified by match to protein family HMM PF00106; dehydrogenase 4249346..4251256 Mycobacterium avium 104 4527642 YP_883274.1 CDS MAV_4125 NC_008595.1 4251261 4252577 R identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce complement(4251261..4252577) Mycobacterium avium 104 4526462 YP_883275.1 CDS MAV_4126 NC_008595.1 4252809 4254101 R identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce complement(4252809..4254101) Mycobacterium avium 104 4529615 YP_883276.1 CDS MAV_4127 NC_008595.1 4254363 4255310 D identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 4254363..4255310 Mycobacterium avium 104 4528481 YP_883277.1 CDS MAV_4128 NC_008595.1 4255362 4255898 D hypothetical protein 4255362..4255898 Mycobacterium avium 104 4527368 YP_883278.1 CDS MAV_4129 NC_008595.1 4255922 4256410 D identified by similarity to SP:P06610; match to protein family HMM PF00255; glutathione peroxidase 4255922..4256410 Mycobacterium avium 104 4526336 YP_883279.1 CDS MAV_4130 NC_008595.1 4256435 4257211 R immunogenic protein MPT64 complement(4256435..4257211) Mycobacterium avium 104 4526450 YP_883280.1 CDS MAV_4131 NC_008595.1 4257431 4258702 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(4257431..4258702) Mycobacterium avium 104 4526313 YP_883281.1 CDS MAV_4132 NC_008595.1 4258690 4259871 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 4258690..4259871 Mycobacterium avium 104 4530678 YP_883282.1 CDS MAV_4133 NC_008595.1 4259910 4260128 R transposase complement(4259910..4260128) Mycobacterium avium 104 4528739 YP_883283.1 CDS MAV_4134 NC_008595.1 4260374 4260925 D gp62 protein 4260374..4260925 Mycobacterium avium 104 4527040 YP_883284.1 CDS MAV_4135 NC_008595.1 4260943 4261653 R hypothetical protein complement(4260943..4261653) Mycobacterium avium 104 4527393 YP_883285.1 CDS MAV_4137 NC_008595.1 4262181 4265162 R identified by match to protein family HMM PF03699; hypothetical protein complement(4262181..4265162) Mycobacterium avium 104 4530187 YP_883286.1 CDS MAV_4138 NC_008595.1 4265231 4266253 R PDZ domain-containing protein complement(4265231..4266253) Mycobacterium avium 104 4525530 YP_883287.1 CDS MAV_4139 NC_008595.1 4266375 4267739 D hypothetical protein 4266375..4267739 Mycobacterium avium 104 4529030 YP_883288.1 CDS MAV_4140 NC_008595.1 4267895 4268764 D hypothetical protein 4267895..4268764 Mycobacterium avium 104 4528876 YP_883289.1 CDS MAV_4141 NC_008595.1 4268876 4270204 D identified by match to protein family HMM PF03109; ABC transporter 4268876..4270204 Mycobacterium avium 104 4527598 YP_883290.1 CDS MAV_4142 NC_008595.1 4270216 4270488 R identified by match to protein family HMM PF02467; transcription factor WhiB complement(4270216..4270488) Mycobacterium avium 104 4527124 YP_883291.1 CDS MAV_4143 NC_008595.1 4270924 4273155 R identified by match to protein family HMM PF00570; match to protein family HMM PF00580; ATP-dependent DNA helicase complement(4270924..4273155) Mycobacterium avium 104 4526281 YP_883292.1 CDS MAV_4144 NC_008595.1 4273223 4273477 D identified by match to protein family HMM PF00462; match to protein family HMM TIGR02200; hypothetical protein 4273223..4273477 Mycobacterium avium 104 4530644 YP_883293.1 CDS nudC NC_008595.1 4273486 4274418 R can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase complement(4273486..4274418) Mycobacterium avium 104 4525691 YP_883294.1 CDS MAV_4146 NC_008595.1 4274418 4275488 R identified by match to protein family HMM PF02254; match to protein family HMM PF07885; ion channel membrane protein complement(4274418..4275488) Mycobacterium avium 104 4527650 YP_883295.1 CDS MAV_4147 NC_008595.1 4275579 4278869 R identified by match to protein family HMM PF00580; superfamily protein I DNA and RNA helicases complement(4275579..4278869) Mycobacterium avium 104 4526448 YP_883296.1 CDS MAV_4148 NC_008595.1 4278866 4281994 R identified by match to protein family HMM PF00580; helicase, UvrD/Rep family protein complement(4278866..4281994) Mycobacterium avium 104 4527369 YP_883297.1 CDS MAV_4149 NC_008595.1 4282119 4282319 D hypothetical protein 4282119..4282319 Mycobacterium avium 104 4526667 YP_883298.1 CDS MAV_4150 NC_008595.1 4282380 4283165 D identified by match to protein family HMM PF00561; alpha/beta hydrolase 4282380..4283165 Mycobacterium avium 104 4530156 YP_883299.1 CDS MAV_4152 NC_008595.1 4283167 4283469 D identified by match to protein family HMM PF01035; 6-O-methylguanine DNA methyltransferase 4283167..4283469 Mycobacterium avium 104 4526058 YP_883300.1 CDS MAV_4151 NC_008595.1 4283466 4284320 R identified by match to protein family HMM TIGR02569; hypothetical protein complement(4283466..4284320) Mycobacterium avium 104 4529986 YP_883301.1 CDS MAV_4153 NC_008595.1 4284356 4285552 R The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2,6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation; molybdopterin biosynthesis-like protein MoeZ complement(4284356..4285552) Mycobacterium avium 104 4530689 YP_883302.1 CDS MAV_4154 NC_008595.1 4285643 4286782 R hypothetical protein complement(4285643..4286782) Mycobacterium avium 104 4528968 YP_883303.1 CDS MAV_4155 NC_008595.1 4286887 4287573 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4286887..4287573 Mycobacterium avium 104 4525535 YP_883304.1 CDS MAV_4156 NC_008595.1 4287581 4287844 R hypothetical protein complement(4287581..4287844) Mycobacterium avium 104 4530109 YP_883305.1 CDS MAV_4157 NC_008595.1 4288063 4288800 D hypothetical protein 4288063..4288800 Mycobacterium avium 104 4528273 YP_883306.1 CDS MAV_4158 NC_008595.1 4288822 4289427 R hypothetical protein complement(4288822..4289427) Mycobacterium avium 104 4530134 YP_883307.1 CDS MAV_4160 NC_008595.1 4291383 4292573 D hypothetical protein 4291383..4292573 Mycobacterium avium 104 4526320 YP_883308.1 CDS MAV_4161 NC_008595.1 4292732 4293532 R identified by match to protein family HMM PF01656; cobyrinic acid a,c-diamide synthase complement(4292732..4293532) Mycobacterium avium 104 4525560 YP_883309.1 CDS MAV_4162 NC_008595.1 4293645 4294229 D forms a homodimer in Mycobacterium tuberculosis; belongs to the dPGM superfamily; acid phosphatase 4293645..4294229 Mycobacterium avium 104 4527016 YP_883310.1 CDS MAV_4163 NC_008595.1 4294226 4295320 D identified by match to protein family HMM PF00425; match to protein family HMM TIGR00543; isochorismate synthase DhbC 4294226..4295320 Mycobacterium avium 104 4527519 YP_883311.1 CDS MAV_4165 NC_008595.1 4295317 4295799 D identified by match to protein family HMM PF00583; acetyltransferase 4295317..4295799 Mycobacterium avium 104 4529703 YP_883312.1 CDS MAV_4164 NC_008595.1 4295751 4296182 R hypothetical protein complement(4295751..4296182) Mycobacterium avium 104 4526780 YP_883313.1 CDS MAV_4166 NC_008595.1 4296385 4297350 D identified by match to protein family HMM PF00781; diacylglycerol kinase catalytic subunit 4296385..4297350 Mycobacterium avium 104 4527265 YP_883314.1 CDS MAV_4167 NC_008595.1 4297632 4297886 D identified by match to protein family HMM PF02467; transcription factor WhiB 4297632..4297886 Mycobacterium avium 104 4525689 YP_883315.1 CDS MAV_4168 NC_008595.1 4297956 4299455 R identified by match to protein family HMM PF02518; match to protein family HMM PF07568; sensor histidine kinase complement(4297956..4299455) Mycobacterium avium 104 4526354 YP_883316.1 CDS MAV_4169 NC_008595.1 4299484 4299705 R identified by match to protein family HMM PF00364; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit complement(4299484..4299705) Mycobacterium avium 104 4526504 YP_883317.1 CDS MAV_4171 NC_008595.1 4300367 4301173 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE complement(4300367..4301173) Mycobacterium avium 104 4525921 YP_883318.1 CDS MAV_4172 NC_008595.1 4301392 4302240 D identified by match to protein family HMM PF00106; short chain dehydrogenase 4301392..4302240 Mycobacterium avium 104 4527295 YP_883319.1 CDS MAV_4173 NC_008595.1 4302262 4303260 R identified by match to protein family HMM PF00107; zinc-binding dehydrogenase complement(4302262..4303260) Mycobacterium avium 104 4530514 YP_883320.1 CDS MAV_4174 NC_008595.1 4303269 4304453 R hypothetical protein complement(4303269..4304453) Mycobacterium avium 104 4525561 YP_883321.1 CDS MAV_4175 NC_008595.1 4304458 4305207 R identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase complement(4304458..4305207) Mycobacterium avium 104 4529035 YP_883322.1 CDS MAV_4176 NC_008595.1 4305204 4306469 R identified by match to protein family HMM PF00753; metallo-beta-lactamase complement(4305204..4306469) Mycobacterium avium 104 4528947 YP_883323.1 CDS MAV_4177 NC_008595.1 4306554 4307324 D identified by match to protein family HMM PF00106; short chain type dehydrogenase/reductase y4lA 4306554..4307324 Mycobacterium avium 104 4527396 YP_883324.1 CDS MAV_4178 NC_008595.1 4307403 4307951 D hypothetical protein 4307403..4307951 Mycobacterium avium 104 4526415 YP_883325.1 CDS MAV_4179 NC_008595.1 4308031 4308279 D hypothetical protein 4308031..4308279 Mycobacterium avium 104 4526791 YP_883326.1 CDS MAV_4180 NC_008595.1 4308481 4309869 D identified by match to protein family HMM PF02720; hypothetical protein 4308481..4309869 Mycobacterium avium 104 4527646 YP_883327.1 CDS MAV_4181 NC_008595.1 4309882 4310646 R identified by match to protein family HMM PF02586; hypothetical protein complement(4309882..4310646) Mycobacterium avium 104 4529244 YP_883328.2 CDS aroA NC_008595.1 4310793 4312100 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 4310793..4312100 Mycobacterium avium 104 4526820 YP_883329.1 CDS MAV_4184 NC_008595.1 4312097 4313092 D identified by match to protein family HMM PF03193; GTPase EngC 4312097..4313092 Mycobacterium avium 104 4526622 YP_883330.1 CDS MAV_4183 NC_008595.1 4313076 4313552 R identified by match to protein family HMM PF01638; transcriptional regulator complement(4313076..4313552) Mycobacterium avium 104 4525506 YP_883331.1 CDS MAV_4185 NC_008595.1 4313647 4314822 D identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; FadA6_4 4313647..4314822 Mycobacterium avium 104 4527160 YP_883332.1 CDS MAV_4187 NC_008595.1 4314827 4315351 D hypothetical protein 4314827..4315351 Mycobacterium avium 104 4529248 YP_883333.1 CDS MAV_4188 NC_008595.1 4315709 4316851 R hypothetical protein complement(4315709..4316851) Mycobacterium avium 104 4528771 YP_883334.1 CDS MAV_4189 NC_008595.1 4316970 4317596 D identified by match to protein family HMM PF00440; match to protein family HMM PF02796; TetR family transcriptional regulator 4316970..4317596 Mycobacterium avium 104 4529833 YP_883335.1 CDS MAV_4190 NC_008595.1 4317727 4318251 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4317727..4318251 Mycobacterium avium 104 4530750 YP_883336.1 CDS MAV_4191 NC_008595.1 4318248 4319072 D hypothetical protein 4318248..4319072 Mycobacterium avium 104 4527494 YP_883337.1 CDS MAV_4192 NC_008595.1 4319214 4320497 R identified by match to protein family HMM PF00487; Fatty acid desaturase complement(4319214..4320497) Mycobacterium avium 104 4529249 YP_883338.1 CDS MAV_4193 NC_008595.1 4320597 4321751 R identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; 2Fe-2S iron-sulfur cluster binding domain-containing protein complement(4320597..4321751) Mycobacterium avium 104 4530536 YP_883339.1 CDS MAV_4194 NC_008595.1 4321861 4322373 R hypothetical protein complement(4321861..4322373) Mycobacterium avium 104 4529043 YP_883340.1 CDS MAV_4195 NC_008595.1 4322376 4323233 R identified by match to protein family HMM PF03976; polyphosphate kinase 2 complement(4322376..4323233) Mycobacterium avium 104 4526247 YP_883341.1 CDS MAV_4196 NC_008595.1 4323285 4324706 R identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; acyltransferase, ws/dgat/mgat subfamily protein complement(4323285..4324706) Mycobacterium avium 104 4526142 YP_883342.1 CDS MAV_4197 NC_008595.1 4324918 4325478 D hypothetical protein 4324918..4325478 Mycobacterium avium 104 4529189 YP_883343.1 CDS MAV_4198 NC_008595.1 4325492 4326640 R identified by match to protein family HMM PF00999; transporter, monovalent cation:proton antiporter-2 (CPA2) family protein complement(4325492..4326640) Mycobacterium avium 104 4527175 YP_883344.1 CDS MAV_4199 NC_008595.1 4326645 4327127 R identified by match to protein family HMM PF02080; TrkA domain-containing protein complement(4326645..4327127) Mycobacterium avium 104 4526733 YP_883345.1 CDS MAV_4200 NC_008595.1 4327169 4327969 R hypothetical protein complement(4327169..4327969) Mycobacterium avium 104 4530462 YP_883346.1 CDS MAV_4201 NC_008595.1 4327982 4329553 R identified by match to protein family HMM PF00196; match to protein family HMM PF01966; LuxR family transcriptional regulator complement(4327982..4329553) Mycobacterium avium 104 4530776 YP_883347.1 CDS MAV_4204 NC_008595.1 4333598 4334278 R identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; S30AE family protein complement(4333598..4334278) Mycobacterium avium 104 4528219 YP_883348.1 CDS MAV_4205 NC_008595.1 4334386 4334577 R hypothetical protein complement(4334386..4334577) Mycobacterium avium 104 4526666 YP_883349.1 CDS MAV_4206 NC_008595.1 4334574 4335215 R hypothetical protein complement(4334574..4335215) Mycobacterium avium 104 4526460 YP_883350.1 CDS MAV_4208 NC_008595.1 4337040 4338671 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(4337040..4338671) Mycobacterium avium 104 4528367 YP_883351.1 CDS MAV_4209 NC_008595.1 4338796 4339482 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator MtrA complement(4338796..4339482) Mycobacterium avium 104 4528832 YP_883352.1 CDS MAV_4210 NC_008595.1 4339563 4340195 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(4339563..4340195) Mycobacterium avium 104 4525776 YP_883353.1 CDS ahcY NC_008595.1 4340282 4341772 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(4340282..4341772) Mycobacterium avium 104 4530602 YP_883354.1 CDS MAV_4212 NC_008595.1 4341881 4342486 R identified by match to protein family HMM PF00440; transcriptional regulator complement(4341881..4342486) Mycobacterium avium 104 4526883 YP_883355.1 CDS MAV_4213 NC_008595.1 4342529 4342711 R identified by match to protein family HMM PF00301; rubredoxin complement(4342529..4342711) Mycobacterium avium 104 4527053 YP_883356.1 CDS MAV_4214 NC_008595.1 4342716 4342889 R identified by match to protein family HMM PF00301; rubredoxin complement(4342716..4342889) Mycobacterium avium 104 4530242 YP_883357.1 CDS MAV_4215 NC_008595.1 4342886 4344133 R identified by match to protein family HMM PF00487; alkane-1-monooxygenase complement(4342886..4344133) Mycobacterium avium 104 4530448 YP_883358.1 CDS MAV_4216 NC_008595.1 4344255 4345772 R identified by match to protein family HMM PF00324; cationic amino acid transporter complement(4344255..4345772) Mycobacterium avium 104 4529254 YP_883359.1 CDS MAV_4218 NC_008595.1 4345836 4347245 D hypothetical protein 4345836..4347245 Mycobacterium avium 104 4530424 YP_883360.1 CDS manA NC_008595.1 4347223 4348449 R identified by match to protein family HMM PF01238; match to protein family HMM TIGR00218; mannose-6-phosphate isomerase, class I complement(4347223..4348449) Mycobacterium avium 104 4529784 YP_883361.1 CDS MAV_4219 NC_008595.1 4348458 4349558 R hypothetical protein complement(4348458..4349558) Mycobacterium avium 104 4526037 YP_883362.1 CDS MAV_4221 NC_008595.1 4351082 4351480 R hypothetical protein complement(4351082..4351480) Mycobacterium avium 104 4527953 YP_883363.1 CDS MAV_4222 NC_008595.1 4351544 4352137 D hypothetical protein 4351544..4352137 Mycobacterium avium 104 4530460 YP_883364.1 CDS MAV_4223 NC_008595.1 4352161 4352499 R identified by match to protein family HMM PF02467; transcription factor WhiB complement(4352161..4352499) Mycobacterium avium 104 4525889 YP_883365.1 CDS cofD NC_008595.1 4352897 4353910 D catalyzes the formation of the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) and GMP from actyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); LPPG:FO 2-phospho-L-lactate transferase 4352897..4353910 Mycobacterium avium 104 4528415 YP_883366.1 CDS MAV_4225 NC_008595.1 4353907 4355256 D catalyzes the addition of gamma linked glutamate to 7,8-didemethyl-8-hydroxy-5-deazariboflavin coenzyme F420-0); F420-0--gamma-glutamyl ligase 4353907..4355256 Mycobacterium avium 104 4526398 YP_883367.1 CDS MAV_4226 NC_008595.1 4355267 4356847 D BpmI methyltransferase 4355267..4356847 Mycobacterium avium 104 4530097 YP_883368.1 CDS MAV_4227 NC_008595.1 4356844 4357386 D identified by match to protein family HMM PF00293; hydrolase, nudix family protein, putative 4356844..4357386 Mycobacterium avium 104 4530294 YP_883369.1 CDS MAV_4229 NC_008595.1 4357388 4357480 D hypothetical protein 4357388..4357480 Mycobacterium avium 104 4526857 YP_883370.1 CDS MAV_4228 NC_008595.1 4357462 4358538 R identified by match to protein family HMM PF00132; match to protein family HMM PF00483; nucleotidyl transferase complement(4357462..4358538) Mycobacterium avium 104 4529949 YP_883371.1 CDS MAV_4230 NC_008595.1 4358540 4359415 R identified by match to protein family HMM PF00535; dTDP-RhA:a-D-GlcNAc-diphosphoryl polyprenol, a-3-L-rhamnosyl transferase complement(4358540..4359415) Mycobacterium avium 104 4530016 YP_883372.1 CDS rfbD NC_008595.1 4359417 4360325 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01214; dTDP-4-dehydrorhamnose reductase complement(4359417..4360325) Mycobacterium avium 104 4528497 YP_883373.1 CDS MAV_4232 NC_008595.1 4360463 4361911 D identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; cell envelope-related function transcriptional attenuator 4360463..4361911 Mycobacterium avium 104 4526996 YP_883374.1 CDS MAV_4233 NC_008595.1 4361917 4362630 D identified by match to protein family HMM TIGR03089; hypothetical protein 4361917..4362630 Mycobacterium avium 104 4530142 YP_883375.1 CDS MAV_4234 NC_008595.1 4362734 4363015 D hypothetical protein 4362734..4363015 Mycobacterium avium 104 4525526 YP_883376.1 CDS cadA NC_008595.1 4363026 4365164 D identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525; cadmium-translocating P-type ATPase 4363026..4365164 Mycobacterium avium 104 4529355 YP_883377.1 CDS MAV_4236 NC_008595.1 4365322 4366236 D identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein 4365322..4366236 Mycobacterium avium 104 4525647 YP_883378.1 CDS MAV_4237 NC_008595.1 4366248 4367468 D identified by match to protein family HMM PF02515; YfdE protein 4366248..4367468 Mycobacterium avium 104 4527093 YP_883379.1 CDS MAV_4238 NC_008595.1 4367472 4369442 R identified by match to protein family HMM PF00069; match to protein family HMM PF01436; serine/threonine protein kinase complement(4367472..4369442) Mycobacterium avium 104 4527226 YP_883380.1 CDS pstS NC_008595.1 4369494 4370594 R identified by match to protein family HMM PF01547; match to protein family HMM TIGR00975; phosphate ABC transporter phosphate-binding protein PstS complement(4369494..4370594) Mycobacterium avium 104 4530124 YP_883381.1 CDS MAV_4240 NC_008595.1 4370729 4371169 R identified by match to protein family HMM PF00072; two-component system response regulator complement(4370729..4371169) Mycobacterium avium 104 4528428 YP_883382.1 CDS MAV_4241 NC_008595.1 4371166 4372773 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227; two-component sensor protein complement(4371166..4372773) Mycobacterium avium 104 4528086 YP_883383.1 CDS MAV_4242 NC_008595.1 4372770 4373972 R identified by match to protein family HMM PF00072; match to protein family HMM PF07228; response regulator receiver modulated serine phosphatase complement(4372770..4373972) Mycobacterium avium 104 4528162 YP_883384.1 CDS MAV_4243 NC_008595.1 4374170 4375339 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(4374170..4375339) Mycobacterium avium 104 4527991 YP_883385.1 CDS purE NC_008595.1 4375358 4375879 R identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase, catalytic subunit complement(4375358..4375879) Mycobacterium avium 104 4530128 YP_883386.1 CDS purK NC_008595.1 4375876 4377069 R With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(4375876..4377069) Mycobacterium avium 104 4528500 YP_883387.1 CDS MAV_4247 NC_008595.1 4377280 4377945 D identified by match to protein family HMM PF04138; hypothetical protein 4377280..4377945 Mycobacterium avium 104 4529266 YP_883388.1 CDS MAV_4246 NC_008595.1 4377900 4378418 R identified by match to protein family HMM PF03703; hypothetical protein complement(4377900..4378418) Mycobacterium avium 104 4526725 YP_883389.1 CDS MAV_4248 NC_008595.1 4378460 4379254 R identified by match to protein family HMM PF02237; match to protein family HMM PF03099; match to protein family HMM TIGR00121; biotin-[acetyl-CoA-carboxylase] ligase complement(4378460..4379254) Mycobacterium avium 104 4527904 YP_883390.1 CDS MAV_4249 NC_008595.1 4379302 4380855 R catalyzes transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; 3-ketosteroid-delta-1-dehydrogenase complement(4379302..4380855) Mycobacterium avium 104 4528052 YP_883391.1 CDS MAV_4250 NC_008595.1 4380895 4382535 D identified by match to protein family HMM PF01039; propionyl-CoA carboxylase beta chain 4380895..4382535 Mycobacterium avium 104 4530048 YP_883392.1 CDS MAV_4251 NC_008595.1 4382532 4382792 D hypothetical protein 4382532..4382792 Mycobacterium avium 104 4529037 YP_883393.1 CDS maf NC_008595.1 4382801 4383421 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 4382801..4383421 Mycobacterium avium 104 4526342 YP_883394.1 CDS MAV_4253 NC_008595.1 4383568 4384464 D identified by match to protein family HMM PF00581; thiosulfate sulfurtransferase 4383568..4384464 Mycobacterium avium 104 4526204 YP_883395.1 CDS sufE NC_008595.1 4384475 4384897 D identified by match to protein family HMM PF02657; Fe-S metabolism associated domain-containing protein 4384475..4384897 Mycobacterium avium 104 4527214 YP_883396.1 CDS MAV_4255 NC_008595.1 4385054 4386817 D identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF01071; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786; acetyl-/propionyl-coenzyme A carboxylase alpha chain 4385054..4386817 Mycobacterium avium 104 4525899 YP_883397.1 CDS MAV_4257 NC_008595.1 4387014 4387436 D identified by match to protein family HMM PF01740; STAS domain-containing protein 4387014..4387436 Mycobacterium avium 104 4528247 YP_883398.1 CDS MAV_4256 NC_008595.1 4387407 4388132 R Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is a general stress response regulator; expressed in stationary phase and under nitrogen depletion and cold shock; RNA polymerase sigma factor SigF complement(4387407..4388132) Mycobacterium avium 104 4530515 YP_883399.1 CDS MAV_4258 NC_008595.1 4388192 4388629 R RsbW protein complement(4388192..4388629) Mycobacterium avium 104 4527340 YP_883400.1 CDS MAV_4259 NC_008595.1 4388737 4388886 D hypothetical protein 4388737..4388886 Mycobacterium avium 104 4527576 YP_883401.1 CDS MAV_4260 NC_008595.1 4389075 4389386 R UsfY protein complement(4389075..4389386) Mycobacterium avium 104 4526138 YP_883402.1 CDS MAV_4261 NC_008595.1 4389447 4389773 R hypothetical protein complement(4389447..4389773) Mycobacterium avium 104 4529672 YP_883403.1 CDS MAV_4262 NC_008595.1 4390027 4391367 R catalyzes the formation of 2-aminoadipate 6-semiladehyde and glutamate from lysine and 2-oxoglutarate; L-lysine aminotransferase complement(4390027..4391367) Mycobacterium avium 104 4526377 YP_883404.1 CDS MAV_4263 NC_008595.1 4391419 4391871 R identified by match to protein family HMM PF01037; leucine-responsive regulatory protein complement(4391419..4391871) Mycobacterium avium 104 4527004 YP_883405.1 CDS MAV_4264 NC_008595.1 4391944 4393161 D identified by match to protein family HMM PF07063; hypothetical protein 4391944..4393161 Mycobacterium avium 104 4528581 YP_883406.1 CDS MAV_4265 NC_008595.1 4393158 4394687 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase (NAD) family protein 4393158..4394687 Mycobacterium avium 104 4526368 YP_883407.1 CDS MAV_4266 NC_008595.1 4394734 4395393 D identified by match to protein family HMM PF00440; hypothetical protein 4394734..4395393 Mycobacterium avium 104 4526815 YP_883408.1 CDS MAV_4267 NC_008595.1 4395436 4400067 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; DEAD/DEAH box helicase 4395436..4400067 Mycobacterium avium 104 4527411 YP_883409.1 CDS MAV_4268 NC_008595.1 4400820 4401737 R LpqC protein complement(4400820..4401737) Mycobacterium avium 104 4528449 YP_883410.1 CDS MAV_4270 NC_008595.1 4401742 4401870 R hypothetical protein complement(4401742..4401870) Mycobacterium avium 104 4526255 YP_883411.1 CDS MAV_4271 NC_008595.1 4401929 4402282 D identified by match to protein family HMM PF05305; hypothetical protein 4401929..4402282 Mycobacterium avium 104 4530042 YP_883412.1 CDS MAV_4272 NC_008595.1 4402368 4402580 D hypothetical protein 4402368..4402580 Mycobacterium avium 104 4527156 YP_883413.1 CDS MAV_4273 NC_008595.1 4402656 4403792 R identified by match to protein family HMM PF00823; PPE family protein complement(4402656..4403792) Mycobacterium avium 104 4530367 YP_883414.1 CDS MAV_4274 NC_008595.1 4403902 4405038 R identified by match to protein family HMM PF00823; PPE family protein complement(4403902..4405038) Mycobacterium avium 104 4525729 YP_883415.1 CDS MAV_4275 NC_008595.1 4405271 4405558 R hypothetical protein complement(4405271..4405558) Mycobacterium avium 104 4528802 YP_883416.1 CDS MAV_4276 NC_008595.1 4405626 4406222 R diguanylate cyclase/phosphodiesterase complement(4405626..4406222) Mycobacterium avium 104 4526046 YP_883417.1 CDS MAV_4277 NC_008595.1 4406262 4407125 R identified by match to protein family HMM PF00849; RNA pseudouridine synthase complement(4406262..4407125) Mycobacterium avium 104 4528246 YP_883418.1 CDS MAV_4278 NC_008595.1 4407131 4408885 R identified by match to protein family HMM PF01266; glycerol-3-phosphate dehydrogenase 2 complement(4407131..4408885) Mycobacterium avium 104 4528745 YP_883419.1 CDS MAV_4280 NC_008595.1 4410510 4410977 D L308_f3_97 4410510..4410977 Mycobacterium avium 104 4527950 YP_883420.1 CDS MAV_4281 NC_008595.1 4411000 4412178 R identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891; amidohydrolase complement(4411000..4412178) Mycobacterium avium 104 4528553 YP_883421.1 CDS MAV_4282 NC_008595.1 4412175 4413377 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; amidohydrolase complement(4412175..4413377) Mycobacterium avium 104 4528389 YP_883422.1 CDS MAV_4283 NC_008595.1 4413423 4413977 R identified by match to protein family HMM PF01083; cutinase Cut3 complement(4413423..4413977) Mycobacterium avium 104 4529426 YP_883423.1 CDS MAV_4284 NC_008595.1 4414295 4415110 D catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 4414295..4415110 Mycobacterium avium 104 4530088 YP_883424.1 CDS MAV_4286 NC_008595.1 4415115 4416695 D identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase 4415115..4416695 Mycobacterium avium 104 4528889 YP_883425.1 CDS upp NC_008595.1 4416547 4417458 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(4416547..4417458) Mycobacterium avium 104 4527539 YP_883426.1 CDS MAV_4287 NC_008595.1 4417485 4418315 D identified by match to protein family HMM PF04185; secreted acid phosphatase 4417485..4418315 Mycobacterium avium 104 4530770 YP_883427.1 CDS MAV_4288 NC_008595.1 4418341 4419654 D hypothetical protein 4418341..4419654 Mycobacterium avium 104 4525829 YP_883428.1 CDS MAV_4290 NC_008595.1 4420690 4421697 R identified by match to protein family HMM PF00092; hypothetical protein complement(4420690..4421697) Mycobacterium avium 104 4530418 YP_883429.1 CDS MAV_4291 NC_008595.1 4421803 4423128 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(4421803..4423128) Mycobacterium avium 104 4530111 YP_883430.1 CDS MAV_4292 NC_008595.1 4423302 4424495 D identified by match to protein family HMM PF01844; match to protein family HMM PF02720; hypothetical protein 4423302..4424495 Mycobacterium avium 104 4529162 YP_883431.1 CDS MAV_4293 NC_008595.1 4424603 4425064 D hypothetical protein 4424603..4425064 Mycobacterium avium 104 4527234 YP_883432.1 CDS add NC_008595.1 4425216 4426316 R catalyzes the formation of inosine from adenosine; adenosine deaminase complement(4425216..4426316) Mycobacterium avium 104 4528762 YP_883433.1 CDS deoA NC_008595.1 4426313 4427596 R Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase complement(4426313..4427596) Mycobacterium avium 104 4529591 YP_883434.1 CDS cdd NC_008595.1 4427596 4427997 R Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase complement(4427596..4427997) Mycobacterium avium 104 4530764 YP_883435.1 CDS sdhC NC_008595.1 4428269 4428607 D identified by match to protein family HMM PF01127; match to protein family HMM TIGR02970; succinate dehydrogenase, cytochrome b556 subunit 4428269..4428607 Mycobacterium avium 104 4527710 YP_883436.1 CDS MAV_4298 NC_008595.1 4428604 4429074 D succinate dehydrogenase hydrophobic membrane anchor protein SdhD 4428604..4429074 Mycobacterium avium 104 4529015 YP_883437.1 CDS sdhA NC_008595.1 4429082 4430836 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 4429082..4430836 Mycobacterium avium 104 4529507 YP_883438.1 CDS sdhB NC_008595.1 4430837 4431640 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 4430837..4431640 Mycobacterium avium 104 4529133 YP_883439.1 CDS MAV_4302 NC_008595.1 4431827 4432441 D transposase 4431827..4432441 Mycobacterium avium 104 4526681 YP_883440.1 CDS MAV_4301 NC_008595.1 4432416 4433372 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigJ complement(4432416..4433372) Mycobacterium avium 104 4529418 YP_883441.1 CDS MAV_4304 NC_008595.1 4433371 4434702 D identified by match to protein family HMM PF00202; hypothetical protein 4433371..4434702 Mycobacterium avium 104 4528085 YP_883442.1 CDS MAV_4303 NC_008595.1 4434677 4434928 R hypothetical protein complement(4434677..4434928) Mycobacterium avium 104 4530530 YP_883443.1 CDS MAV_4305 NC_008595.1 4435143 4436402 D identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase 4435143..4436402 Mycobacterium avium 104 4529533 YP_883444.1 CDS MAV_4306 NC_008595.1 4436408 4437760 D identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; transporter, major facilitator superfamily protein 4436408..4437760 Mycobacterium avium 104 4528467 YP_883445.1 CDS nagA NC_008595.1 4437751 4438887 D identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR00221; N-acetylglucosamine-6-phosphate deacetylase 4437751..4438887 Mycobacterium avium 104 4530733 YP_883446.1 CDS MAV_4309 NC_008595.1 4438980 4439294 D identified by match to protein family HMM PF00893; multidrug resistance protein, SMR family protein 4438980..4439294 Mycobacterium avium 104 4526233 YP_883447.1 CDS trpS NC_008595.1 4440330 4441361 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(4440330..4441361) Mycobacterium avium 104 4528529 YP_883448.1 CDS MAV_4312 NC_008595.1 4441535 4442332 D identified by match to protein family HMM PF00561; alpha/beta hydrolase 4441535..4442332 Mycobacterium avium 104 4528845 YP_883449.1 CDS MAV_4311 NC_008595.1 4442325 4443563 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(4442325..4443563) Mycobacterium avium 104 4530292 YP_883450.1 CDS MAV_4313 NC_008595.1 4443565 4445802 R identified by match to protein family HMM PF03971; match to protein family HMM TIGR00178; isocitrate dehydrogenase, NADP-dependent complement(4443565..4445802) Mycobacterium avium 104 4528952 YP_883451.1 CDS MAV_4314 NC_008595.1 4445920 4446153 R hypothetical protein complement(4445920..4446153) Mycobacterium avium 104 4530253 YP_883452.1 CDS MAV_4315 NC_008595.1 4446271 4447641 D catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 4446271..4447641 Mycobacterium avium 104 4530622 YP_883453.1 CDS metX NC_008595.1 4447653 4448831 D Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 4447653..4448831 Mycobacterium avium 104 4526040 YP_883454.1 CDS MAV_4317 NC_008595.1 4448828 4449559 D methyltransferase 4448828..4449559 Mycobacterium avium 104 4528594 YP_883455.1 CDS MAV_4319 NC_008595.1 4450896 4452173 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 4450896..4452173 Mycobacterium avium 104 4530169 YP_883456.1 CDS MAV_4320 NC_008595.1 4452277 4452414 D hypothetical protein 4452277..4452414 Mycobacterium avium 104 4526498 YP_883457.1 CDS MAV_4321 NC_008595.1 4452562 4453065 D identified by match to protein family HMM PF05305; hypothetical protein 4452562..4453065 Mycobacterium avium 104 4530389 YP_883458.1 CDS MAV_4322 NC_008595.1 4453157 4453438 R hypothetical protein complement(4453157..4453438) Mycobacterium avium 104 4526722 YP_883459.1 CDS MAV_4323 NC_008595.1 4453435 4454280 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(4453435..4454280) Mycobacterium avium 104 4526276 YP_883460.1 CDS MAV_4324 NC_008595.1 4454421 4455638 D identified by match to protein family HMM PF00724; oxidoreductase, FAD/FMN-binding superfamily protein 4454421..4455638 Mycobacterium avium 104 4527386 YP_883461.1 CDS MAV_4325 NC_008595.1 4455744 4458284 D identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061; ABC transporter ATP-binding protein 4455744..4458284 Mycobacterium avium 104 4527350 YP_883462.1 CDS MAV_4326 NC_008595.1 4458343 4460781 D identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061; ABC transporter ATP-binding protein 4458343..4460781 Mycobacterium avium 104 4528323 YP_883463.1 CDS MAV_4327 NC_008595.1 4460786 4461343 R identified by match to protein family HMM PF00805; hypothetical protein complement(4460786..4461343) Mycobacterium avium 104 4528313 YP_883464.1 CDS MAV_4328 NC_008595.1 4461340 4461927 R identified by match to protein family HMM PF03029; ATP/GTP-binding protein complement(4461340..4461927) Mycobacterium avium 104 4526423 YP_883465.1 CDS MAV_4329 NC_008595.1 4461908 4462282 R identified by match to protein family HMM PF05331; hypothetical protein complement(4461908..4462282) Mycobacterium avium 104 4525548 YP_883466.1 CDS MAV_4330 NC_008595.1 4462290 4462712 R identified by match to protein family HMM PF03259; roadblock/LC7 domain-contain protein complement(4462290..4462712) Mycobacterium avium 104 4527450 YP_883467.1 CDS MAV_4331 NC_008595.1 4462709 4465552 R identified by match to protein family HMM PF00672; match to protein family HMM PF02518; hypothetical protein complement(4462709..4465552) Mycobacterium avium 104 4525694 YP_883468.1 CDS MAV_4332 NC_008595.1 4465802 4466407 R SAM-dependent methyltransferases complement(4465802..4466407) Mycobacterium avium 104 4526268 YP_883469.1 CDS MAV_4333 NC_008595.1 4466425 4466889 D identified by match to protein family HMM PF00588; RNA methyltransferase, TrmH family protein, group 2 4466425..4466889 Mycobacterium avium 104 4528349 YP_883470.1 CDS MAV_4334 NC_008595.1 4466960 4467607 R identified by match to protein family HMM PF00881; nitroreductase complement(4466960..4467607) Mycobacterium avium 104 4529384 YP_883471.1 CDS dnaE2 NC_008595.1 4467727 4471008 R DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase complement(4467727..4471008) Mycobacterium avium 104 4526712 YP_883472.1 CDS MAV_4336 NC_008595.1 4471180 4472505 D identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; acyltransferase, ws/dgat/mgat subfamily protein 4471180..4472505 Mycobacterium avium 104 4527872 YP_883473.1 CDS MAV_4338 NC_008595.1 4472549 4473724 D identified by match to protein family HMM PF02358; match to protein family HMM TIGR00685; match to protein family HMM TIGR01484; glycosyl hydrolase 4472549..4473724 Mycobacterium avium 104 4527033 YP_883474.1 CDS MAV_4337 NC_008595.1 4473721 4474587 R identified by match to protein family HMM PF01575; MaoC family protein complement(4473721..4474587) Mycobacterium avium 104 4529721 YP_883475.1 CDS MAV_4339 NC_008595.1 4474714 4475394 D identified by match to protein family HMM PF00300; phosphoglycerate mutase 4474714..4475394 Mycobacterium avium 104 4526581 YP_883476.1 CDS MAV_4340 NC_008595.1 4475452 4477509 D identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; short chain dehydrogenase 4475452..4477509 Mycobacterium avium 104 4526584 YP_883477.1 CDS MAV_4342 NC_008595.1 4478314 4479354 D identified by match to protein family HMM PF01156; inosine-uridine preferring nucleoside hydrolase 4478314..4479354 Mycobacterium avium 104 4530410 YP_883478.1 CDS MAV_4343 NC_008595.1 4479517 4480776 D FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 4479517..4480776 Mycobacterium avium 104 4527848 YP_883479.1 CDS MAV_4345 NC_008595.1 4480834 4482012 D identified by match to protein family HMM PF01070; lactate 2-monooxygenase 4480834..4482012 Mycobacterium avium 104 4529065 YP_883480.1 CDS MAV_4344 NC_008595.1 4482003 4483544 R hypothetical protein complement(4482003..4483544) Mycobacterium avium 104 4527688 YP_883481.1 CDS MAV_4346 NC_008595.1 4483593 4484282 R hypothetical protein complement(4483593..4484282) Mycobacterium avium 104 4528775 YP_883482.1 CDS MAV_4347 NC_008595.1 4484498 4484653 D Pd2U protein 4484498..4484653 Mycobacterium avium 104 4529813 YP_883483.1 CDS guaA NC_008595.1 4484685 4486214 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(4484685..4486214) Mycobacterium avium 104 4525813 YP_883484.1 CDS MAV_4349 NC_008595.1 4486439 4488028 D identified by match to protein family HMM PF00823; PPE family protein 4486439..4488028 Mycobacterium avium 104 4527471 YP_883485.1 CDS MAV_4350 NC_008595.1 4488071 4488859 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR02009; beta-phosphoglucomutase hydrolase 4488071..4488859 Mycobacterium avium 104 4525740 YP_883486.1 CDS MAV_4352 NC_008595.1 4488856 4491231 D identified by match to protein family HMM PF03632; match to protein family HMM PF03633; match to protein family HMM PF03636; glycoside hydrolase 65, central catalytic 4488856..4491231 Mycobacterium avium 104 4527597 YP_883487.1 CDS MAV_4351 NC_008595.1 4491225 4491746 R identified by match to protein family HMM PF00440; HTH-type transcriptional regulator complement(4491225..4491746) Mycobacterium avium 104 4528863 YP_883488.1 CDS MAV_4353 NC_008595.1 4491875 4492768 D identified by match to protein family HMM PF02668; alpha-ketoglutarate-dependent taurine dioxygenase 4491875..4492768 Mycobacterium avium 104 4525939 YP_883489.1 CDS MAV_4354 NC_008595.1 4492771 4494507 R identified by match to protein family HMM PF00732; match to protein family HMM PF01266; FAD dependent oxidoreductase complement(4492771..4494507) Mycobacterium avium 104 4527178 YP_883490.1 CDS MAV_4355 NC_008595.1 4494659 4495798 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase complement(4494659..4495798) Mycobacterium avium 104 4526335 YP_883491.1 CDS guaB NC_008595.1 4495806 4497401 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase complement(4495806..4497401) Mycobacterium avium 104 4526525 YP_883492.1 CDS MAV_4357 NC_008595.1 4497563 4497976 D hypothetical protein 4497563..4497976 Mycobacterium avium 104 4527956 YP_883493.1 CDS MAV_4358 NC_008595.1 4497978 4498778 R hypothetical protein complement(4497978..4498778) Mycobacterium avium 104 4530649 YP_883494.1 CDS MAV_4359 NC_008595.1 4498765 4499343 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this protein is involved in expression of ribosome-associated gene products in stationary phase; RNA polymerase sigma factor SigD complement(4498765..4499343) Mycobacterium avium 104 4528093 YP_883495.1 CDS MAV_4360 NC_008595.1 4499434 4500264 R hypothetical protein complement(4499434..4500264) Mycobacterium avium 104 4529473 YP_883496.1 CDS MAV_4361 NC_008595.1 4500716 4500970 D identified by match to protein family HMM PF02467; transcription factor WhiB 4500716..4500970 Mycobacterium avium 104 4527274 YP_883497.1 CDS sodC NC_008595.1 4501013 4501777 D identified by similarity to SP:P53635; match to protein family HMM PF00080; superoxide dismutase, Cu-Zn 4501013..4501777 Mycobacterium avium 104 4530416 YP_883498.1 CDS MAV_4363 NC_008595.1 4501805 4501927 D hypothetical protein 4501805..4501927 Mycobacterium avium 104 4527906 YP_883499.1 CDS MAV_4364 NC_008595.1 4501933 4503087 R identified by match to protein family HMM PF01494; hypothetical protein complement(4501933..4503087) Mycobacterium avium 104 4527207 YP_883500.1 CDS groEL NC_008595.1 4503246 4504862 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL complement(4503246..4504862) Mycobacterium avium 104 4528061 YP_883501.1 CDS groES NC_008595.1 4504951 4505253 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(4504951..4505253) Mycobacterium avium 104 4530441 YP_883502.1 CDS MAV_4367 NC_008595.1 4505459 4506484 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease complement(4505459..4506484) Mycobacterium avium 104 4525654 YP_883503.1 CDS rimI NC_008595.1 4506481 4506951 R identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575; ribosomal-protein-alanine acetyltransferase complement(4506481..4506951) Mycobacterium avium 104 4529720 YP_883504.1 CDS MAV_4369 NC_008595.1 4506948 4507574 R identified by match to protein family HMM PF00814; peptidase M22, glycoprotease complement(4506948..4507574) Mycobacterium avium 104 4527000 YP_883505.1 CDS MAV_4370 NC_008595.1 4507571 4508050 R identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein complement(4507571..4508050) Mycobacterium avium 104 4530055 YP_883506.1 CDS MAV_4371 NC_008595.1 4508043 4509092 R identified by match to protein family HMM PF00561; alpha/beta hydrolase complement(4508043..4509092) Mycobacterium avium 104 4528875 YP_883507.1 CDS alr NC_008595.1 4509145 4510311 R converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase complement(4509145..4510311) Mycobacterium avium 104 4527463 YP_883508.1 CDS MAV_4373 NC_008595.1 4510422 4511801 R identified by match to protein family HMM PF00282; match to protein family HMM TIGR01788; glutamate decarboxylase complement(4510422..4511801) Mycobacterium avium 104 4529217 YP_883509.1 CDS MAV_4374 NC_008595.1 4511824 4513245 R identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197; carbohydrate kinase complement(4511824..4513245) Mycobacterium avium 104 4526959 YP_883510.1 CDS MAV_4375 NC_008595.1 4513309 4514013 R hypothetical protein complement(4513309..4514013) Mycobacterium avium 104 4528622 YP_883511.1 CDS MAV_4376 NC_008595.1 4514107 4514994 R hypothetical protein complement(4514107..4514994) Mycobacterium avium 104 4525979 YP_883512.1 CDS glmS NC_008595.1 4515109 4516983 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(4515109..4516983) Mycobacterium avium 104 4526279 YP_883513.1 CDS MAV_4378 NC_008595.1 4516997 4517299 D hypothetical protein 4516997..4517299 Mycobacterium avium 104 4530630 YP_883514.1 CDS MAV_4379 NC_008595.1 4517399 4517593 D hypothetical protein 4517399..4517593 Mycobacterium avium 104 4526762 YP_883515.1 CDS MAV_4380 NC_008595.1 4517650 4518489 D hypothetical protein 4517650..4518489 Mycobacterium avium 104 4526533 YP_883516.1 CDS MAV_4381 NC_008595.1 4518515 4519555 D identified by match to protein family HMM PF00296; oxidoreductase 4518515..4519555 Mycobacterium avium 104 4527255 YP_883517.1 CDS MAV_4382 NC_008595.1 4519560 4521026 R hypothetical protein complement(4519560..4521026) Mycobacterium avium 104 4526561 YP_883518.1 CDS MAV_4383 NC_008595.1 4521030 4521359 R hypothetical protein complement(4521030..4521359) Mycobacterium avium 104 4530726 YP_883519.1 CDS glmM NC_008595.1 4521408 4522742 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(4521408..4522742) Mycobacterium avium 104 4527788 YP_883520.1 CDS rpsI NC_008595.1 4522905 4523405 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(4522905..4523405) Mycobacterium avium 104 4530484 YP_883521.1 CDS rplM NC_008595.1 4523402 4523845 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(4523402..4523845) Mycobacterium avium 104 4527188 YP_883522.1 CDS MAV_4387 NC_008595.1 4524068 4524364 R identified by match to protein family HMM PF06013; hypothetical protein complement(4524068..4524364) Mycobacterium avium 104 4526389 YP_883523.1 CDS MAV_4388 NC_008595.1 4524380 4524679 R hypothetical protein complement(4524380..4524679) Mycobacterium avium 104 4529961 YP_883524.1 CDS MAV_4389 NC_008595.1 4524745 4525875 R hypothetical protein complement(4524745..4525875) Mycobacterium avium 104 4526128 YP_883525.1 CDS MAV_4390 NC_008595.1 4525959 4529552 R identified by match to protein family HMM PF01580; ftsk/SpoIIIE family protein complement(4525959..4529552) Mycobacterium avium 104 4528548 YP_883526.1 CDS MAV_4391 NC_008595.1 4529676 4531037 D hypothetical protein 4529676..4531037 Mycobacterium avium 104 4526941 YP_883527.1 CDS MAV_4393 NC_008595.1 4531043 4532332 D identified by match to protein family HMM PF00082; peptidase 4531043..4532332 Mycobacterium avium 104 4526794 YP_883528.1 CDS MAV_4392 NC_008595.1 4532297 4533670 R identified by match to protein family HMM PF05108; hypothetical protein complement(4532297..4533670) Mycobacterium avium 104 4528711 YP_883529.1 CDS MAV_4394 NC_008595.1 4533789 4534658 D identified by match to protein family HMM PF01083; serine esterase, cutinase 4533789..4534658 Mycobacterium avium 104 4526744 YP_883530.1 CDS MAV_4396 NC_008595.1 4534716 4535336 D identified by match to protein family HMM PF01083; cutinase 4534716..4535336 Mycobacterium avium 104 4528251 YP_883531.1 CDS truA NC_008595.1 4535333 4536088 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(4535333..4536088) Mycobacterium avium 104 4528625 YP_883532.1 CDS rplQ NC_008595.1 4536171 4536731 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(4536171..4536731) Mycobacterium avium 104 4525517 YP_883533.1 CDS rpoA NC_008595.1 4536760 4537803 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(4536760..4537803) Mycobacterium avium 104 4530731 YP_883534.1 CDS rpsD NC_008595.1 4537882 4538487 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(4537882..4538487) Mycobacterium avium 104 4529824 YP_883535.1 CDS rpsK NC_008595.1 4538496 4538912 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(4538496..4538912) Mycobacterium avium 104 4530215 YP_883536.1 CDS rpsM NC_008595.1 4538919 4539251 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(4538919..4539251) Mycobacterium avium 104 4529169 YP_883537.1 CDS rpmJ NC_008595.1 4539499 4539612 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(4539499..4539612) Mycobacterium avium 104 4529306 YP_883538.1 CDS infA NC_008595.1 4539638 4539859 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(4539638..4539859) Mycobacterium avium 104 4528545 YP_883539.1 CDS MAV_4404 NC_008595.1 4540114 4540962 D hypothetical protein 4540114..4540962 Mycobacterium avium 104 4527399 YP_883540.1 CDS MAV_4405 NC_008595.1 4540979 4541845 D hypothetical protein 4540979..4541845 Mycobacterium avium 104 4525781 YP_883541.1 CDS rfbB NC_008595.1 4541873 4542868 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181; dTDP-glucose 4,6-dehydratase 4541873..4542868 Mycobacterium avium 104 4527397 YP_883542.1 CDS rfbC NC_008595.1 4542870 4543475 D identified by match to protein family HMM PF00908; match to protein family HMM TIGR01221; dTDP-4-dehydrorhamnose 3,5-epimerase 4542870..4543475 Mycobacterium avium 104 4529604 YP_883543.1 CDS MAV_4408 NC_008595.1 4543708 4544832 D identified by match to protein family HMM PF01757; acyltransferase 4543708..4544832 Mycobacterium avium 104 4526900 YP_883544.1 CDS MAV_4409 NC_008595.1 4544932 4546077 D identified by match to protein family HMM PF01757; acyltransferase 4544932..4546077 Mycobacterium avium 104 4527742 YP_883545.1 CDS MAV_4410 NC_008595.1 4546162 4547250 D identified by match to protein family HMM PF01757; AtfA_1 4546162..4547250 Mycobacterium avium 104 4525978 YP_883546.1 CDS MAV_4411 NC_008595.1 4547247 4547486 D hypothetical protein 4547247..4547486 Mycobacterium avium 104 4527977 YP_883547.1 CDS MAV_4412 NC_008595.1 4547572 4548492 R identified by match to protein family HMM PF00149; match to protein family HMM TIGR01409; metallophosphoesterase complement(4547572..4548492) Mycobacterium avium 104 4529276 YP_883548.1 CDS MAV_4413 NC_008595.1 4548489 4548881 R identified by match to protein family HMM PF00127; copper binding proteins, plastocyanin/azurin family protein complement(4548489..4548881) Mycobacterium avium 104 4527403 YP_883549.1 CDS MAV_4414 NC_008595.1 4548906 4549613 R identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein complement(4548906..4549613) Mycobacterium avium 104 4525758 YP_883550.1 CDS MAV_4415 NC_008595.1 4549610 4550149 R identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase sigma factor, sigma-70 family protein complement(4549610..4550149) Mycobacterium avium 104 4527709 YP_883551.1 CDS MAV_4416 NC_008595.1 4550194 4551618 R hypothetical protein complement(4550194..4551618) Mycobacterium avium 104 4529937 YP_883552.1 CDS mmsA NC_008595.1 4551729 4553249 D identified by match to protein family HMM PF00171; match to protein family HMM TIGR01722; methylmalonate-semialdehyde dehydrogenase 4551729..4553249 Mycobacterium avium 104 4528232 YP_883553.1 CDS MAV_4418 NC_008595.1 4553276 4554436 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase member 8 4553276..4554436 Mycobacterium avium 104 4527038 YP_883554.1 CDS mmsB NC_008595.1 4554461 4555336 D identified by match to protein family HMM PF03446; match to protein family HMM TIGR01692; 3-hydroxyisobutyrate dehydrogenase 4554461..4555336 Mycobacterium avium 104 4526287 YP_883555.1 CDS MAV_4420 NC_008595.1 4555412 4555918 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(4555412..4555918) Mycobacterium avium 104 4528839 YP_883556.1 CDS MAV_4421 NC_008595.1 4555927 4556985 R identified by match to protein family HMM PF00155; histidinol-phosphate aminotransferase complement(4555927..4556985) Mycobacterium avium 104 4527076 YP_883557.1 CDS MAV_4422 NC_008595.1 4556979 4558004 R 3-oxoacyl-ACP synthase III complement(4556979..4558004) Mycobacterium avium 104 4526934 YP_883558.1 CDS MAV_4423 NC_008595.1 4558009 4558656 R hypothetical protein complement(4558009..4558656) Mycobacterium avium 104 4528779 YP_883559.1 CDS MAV_4424 NC_008595.1 4558637 4560388 R identified by match to protein family HMM PF02775; match to protein family HMM PF02776; acetolactate synthase complement(4558637..4560388) Mycobacterium avium 104 4526534 YP_883560.1 CDS MAV_4425 NC_008595.1 4560500 4561195 D identified by match to protein family HMM PF00005; ABC transporter ATPase 4560500..4561195 Mycobacterium avium 104 4527477 YP_883561.1 CDS MAV_4427 NC_008595.1 4561237 4563690 D identified by match to protein family HMM PF02687; efflux ABC transporter permease 4561237..4563690 Mycobacterium avium 104 4530531 YP_883562.1 CDS MAV_4426 NC_008595.1 4563677 4564303 R identified by match to protein family HMM PF01209; methyltransferase, UbiE/COQ5 family protein complement(4563677..4564303) Mycobacterium avium 104 4530643 YP_883563.1 CDS MAV_4428 NC_008595.1 4564300 4564866 R hypothetical protein complement(4564300..4564866) Mycobacterium avium 104 4526884 YP_883564.1 CDS MAV_4429 NC_008595.1 4564890 4566131 R identified by match to protein family HMM PF01266; match to protein family HMM PF01494; FAD binding domain-containing protein complement(4564890..4566131) Mycobacterium avium 104 4527052 YP_883565.1 CDS MAV_4430 NC_008595.1 4566147 4566866 R hypothetical protein complement(4566147..4566866) Mycobacterium avium 104 4526412 YP_883566.1 CDS MAV_4431 NC_008595.1 4566900 4567436 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. tuberculosis this protein regulates polyketide synthases and secreted or membrane proteins; RNA polymerase sigma factor SigL complement(4566900..4567436) Mycobacterium avium 104 4527362 YP_883567.1 CDS map NC_008595.1 4567515 4568315 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase complement(4567515..4568315) Mycobacterium avium 104 4528956 YP_883568.2 CDS adk NC_008595.1 4568318 4568863 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(4568318..4568863) Mycobacterium avium 104 4528673 YP_883569.1 CDS secY NC_008595.1 4568860 4570221 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(4568860..4570221) Mycobacterium avium 104 4526193 YP_883570.1 CDS MAV_4435 NC_008595.1 4570399 4571310 D identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein 4570399..4571310 Mycobacterium avium 104 4526739 YP_883571.1 CDS MAV_4436 NC_008595.1 4571314 4571979 R hypothetical protein complement(4571314..4571979) Mycobacterium avium 104 4527971 YP_883572.1 CDS MAV_4437 NC_008595.1 4572006 4573361 R identified by match to protein family HMM PF00370; match to protein family HMM PF02782; carbohydrate kinase, FGGY family protein complement(4572006..4573361) Mycobacterium avium 104 4526708 YP_883573.1 CDS MAV_4438 NC_008595.1 4573392 4574372 D identified by match to protein family HMM PF00389; match to protein family HMM PF02826; 2-hydroxyacid dehydrogenase 4573392..4574372 Mycobacterium avium 104 4528822 YP_883574.1 CDS MAV_4439 NC_008595.1 4574369 4575022 D catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate; L-fuculose-phosphate aldolase 4574369..4575022 Mycobacterium avium 104 4530534 YP_883575.1 CDS MAV_4440 NC_008595.1 4575049 4576281 R identified by match to protein family HMM PF00107; zinc-binding dehydrogenase complement(4575049..4576281) Mycobacterium avium 104 4528505 YP_883576.1 CDS MAV_4441 NC_008595.1 4576438 4577382 D identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase 4576438..4577382 Mycobacterium avium 104 4526612 YP_883577.1 CDS MAV_4442 NC_008595.1 4577375 4578295 D identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein 4577375..4578295 Mycobacterium avium 104 4528776 YP_883578.1 CDS MAV_4444 NC_008595.1 4578307 4579221 D identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein 4578307..4579221 Mycobacterium avium 104 4527430 YP_883579.1 CDS sppA NC_008595.1 4579218 4581005 R identified by match to protein family HMM PF01343; match to protein family HMM TIGR00705; match to protein family HMM TIGR00706; signal peptide peptidase SppA, 67K type complement(4579218..4581005) Mycobacterium avium 104 4528303 YP_883580.1 CDS MAV_4445 NC_008595.1 4581044 4581970 D identified by match to protein family HMM PF00296; hypothetical protein 4581044..4581970 Mycobacterium avium 104 4530444 YP_883581.1 CDS rplO NC_008595.1 4581984 4582424 R late assembly protein; 50S ribosomal protein L15 complement(4581984..4582424) Mycobacterium avium 104 4526054 YP_883582.1 CDS rpmD NC_008595.1 4582421 4582636 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(4582421..4582636) Mycobacterium avium 104 4527591 YP_883583.1 CDS rpsE NC_008595.1 4582633 4583310 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(4582633..4583310) Mycobacterium avium 104 4526524 YP_883584.1 CDS rplR NC_008595.1 4583345 4583713 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(4583345..4583713) Mycobacterium avium 104 4527683 YP_883585.1 CDS rplF NC_008595.1 4583755 4584294 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(4583755..4584294) Mycobacterium avium 104 4528166 YP_883586.1 CDS rpsH NC_008595.1 4584305 4584697 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(4584305..4584697) Mycobacterium avium 104 4529710 YP_883587.1 CDS rpsN NC_008595.1 4584724 4584909 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 complement(4584724..4584909) Mycobacterium avium 104 4530523 YP_883588.1 CDS rplE NC_008595.1 4584914 4585477 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(4584914..4585477) Mycobacterium avium 104 4526457 YP_883589.1 CDS rplX NC_008595.1 4585479 4585796 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(4585479..4585796) Mycobacterium avium 104 4525512 YP_883590.1 CDS rplN NC_008595.1 4585797 4586165 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(4585797..4586165) Mycobacterium avium 104 4526755 YP_883591.1 CDS MAV_4456 NC_008595.1 4586417 4587919 R identified by match to protein family HMM PF01844; match to protein family HMM PF02720; hypothetical protein complement(4586417..4587919) Mycobacterium avium 104 4527246 YP_883592.1 CDS MAV_4457 NC_008595.1 4588007 4588894 R hypothetical protein complement(4588007..4588894) Mycobacterium avium 104 4529520 YP_883593.1 CDS MAV_4458 NC_008595.1 4589078 4589968 R identified by match to protein family HMM PF03781; sulfatase-modifying factor 1 complement(4589078..4589968) Mycobacterium avium 104 4526216 YP_883594.1 CDS MAV_4459 NC_008595.1 4589997 4590938 R hypothetical protein complement(4589997..4590938) Mycobacterium avium 104 4530214 YP_883595.1 CDS pstS NC_008595.1 4591206 4592333 D identified by match to protein family HMM PF01547; match to protein family HMM TIGR00975; phosphate ABC transporter phosphate-binding protein PstS 4591206..4592333 Mycobacterium avium 104 4526734 YP_883596.1 CDS MAV_4461 NC_008595.1 4592346 4594715 R identified by match to protein family HMM PF00884; arylsulfatase complement(4592346..4594715) Mycobacterium avium 104 4525896 YP_883597.1 CDS rpsQ NC_008595.1 4594806 4595156 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(4594806..4595156) Mycobacterium avium 104 4529828 YP_883598.1 CDS rpmC NC_008595.1 4595156 4595389 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(4595156..4595389) Mycobacterium avium 104 4528110 YP_883599.1 CDS rplP NC_008595.1 4595389 4595805 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(4595389..4595805) Mycobacterium avium 104 4529874 YP_883600.1 CDS rpsC NC_008595.1 4595809 4596651 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(4595809..4596651) Mycobacterium avium 104 4525595 YP_883601.1 CDS rplV NC_008595.1 4596651 4597193 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(4596651..4597193) Mycobacterium avium 104 4526089 YP_883602.1 CDS rpsS NC_008595.1 4597190 4597471 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(4597190..4597471) Mycobacterium avium 104 4528012 YP_883603.1 CDS rplB NC_008595.1 4597499 4598341 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(4597499..4598341) Mycobacterium avium 104 4526917 YP_883604.1 CDS rplW NC_008595.1 4598364 4598666 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(4598364..4598666) Mycobacterium avium 104 4526401 YP_883605.1 CDS rplD NC_008595.1 4598666 4599319 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(4598666..4599319) Mycobacterium avium 104 4528453 YP_883606.1 CDS rplC NC_008595.1 4599319 4599972 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(4599319..4599972) Mycobacterium avium 104 4528343 YP_883607.1 CDS rpsJ NC_008595.1 4599987 4600292 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(4599987..4600292) Mycobacterium avium 104 4530313 YP_883608.1 CDS MAV_4473 NC_008595.1 4600643 4601188 R hypothetical protein complement(4600643..4601188) Mycobacterium avium 104 4528448 YP_883609.1 CDS MAV_4474 NC_008595.1 4601390 4602829 R identified by match to protein family HMM PF00732; match to protein family HMM PF01266; match to protein family HMM PF05199; FAD dependent oxidoreductase, putative complement(4601390..4602829) Mycobacterium avium 104 4526051 YP_883610.1 CDS MAV_4475 NC_008595.1 4602839 4604257 R identified by match to protein family HMM PF00535; membrane sugar transferase complement(4602839..4604257) Mycobacterium avium 104 4526942 YP_883611.1 CDS MAV_4476 NC_008595.1 4604254 4604985 R identified by match to protein family HMM PF02633; creatininase subfamily protein complement(4604254..4604985) Mycobacterium avium 104 4529321 YP_883612.1 CDS MAV_4477 NC_008595.1 4605150 4606334 R identified by match to protein family HMM PF01070; FMN-dependent dehydrogenase complement(4605150..4606334) Mycobacterium avium 104 4526410 YP_883613.1 CDS MAV_4478 NC_008595.1 4606337 4607551 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(4606337..4607551) Mycobacterium avium 104 4527416 YP_883614.1 CDS MAV_4479 NC_008595.1 4607548 4607859 R hypothetical protein complement(4607548..4607859) Mycobacterium avium 104 4526770 YP_883615.1 CDS MAV_4480 NC_008595.1 4607862 4608020 R hypothetical protein complement(4607862..4608020) Mycobacterium avium 104 4530032 YP_883616.1 CDS MAV_4481 NC_008595.1 4608053 4608646 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4608053..4608646 Mycobacterium avium 104 4527548 YP_883617.1 CDS MAV_4482 NC_008595.1 4608643 4609686 D hypothetical protein 4608643..4609686 Mycobacterium avium 104 4527109 YP_883618.1 CDS MAV_4483 NC_008595.1 4609720 4610580 R identified by match to protein family HMM PF00248; 2,5-diketo-D-gluconic acid reductase B complement(4609720..4610580) Mycobacterium avium 104 4529078 YP_883619.1 CDS MAV_4484 NC_008595.1 4611026 4611853 D identified by match to protein family HMM PF00459; inositol monophosphatase 4611026..4611853 Mycobacterium avium 104 4528417 YP_883620.1 CDS MAV_4485 NC_008595.1 4611869 4613065 R identified by match to protein family HMM PF00070; match to protein family HMM PF07992; ferredoxin reductase complement(4611869..4613065) Mycobacterium avium 104 4526198 YP_883621.2 CDS MAV_4486 NC_008595.1 4613091 4613918 R identified by match to protein family HMM PF00106; short chain dehydrogenase complement(4613091..4613918) Mycobacterium avium 104 4529209 YP_883622.1 CDS MAV_4487 NC_008595.1 4614010 4614858 R hypothetical protein complement(4614010..4614858) Mycobacterium avium 104 4527441 YP_883623.1 CDS tuf NC_008595.1 4615870 4617060 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(4615870..4617060) Mycobacterium avium 104 4529864 YP_883624.1 CDS fusA NC_008595.1 4617231 4619336 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(4617231..4619336) Mycobacterium avium 104 4527454 YP_883625.1 CDS rpsG NC_008595.1 4619408 4619878 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(4619408..4619878) Mycobacterium avium 104 4527247 YP_883626.1 CDS rpsL NC_008595.1 4619878 4620252 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(4619878..4620252) Mycobacterium avium 104 4529115 YP_883627.1 CDS MAV_4493 NC_008595.1 4620318 4620431 D hypothetical protein 4620318..4620431 Mycobacterium avium 104 4526757 YP_883628.1 CDS MAV_4494 NC_008595.1 4620500 4621132 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(4620500..4621132) Mycobacterium avium 104 4527926 YP_883629.1 CDS MAV_4495 NC_008595.1 4621287 4621664 D hypothetical protein 4621287..4621664 Mycobacterium avium 104 4528990 YP_883630.1 CDS MAV_4496 NC_008595.1 4621761 4622195 D hypothetical protein 4621761..4622195 Mycobacterium avium 104 4526553 YP_883631.1 CDS MAV_4497 NC_008595.1 4622210 4622977 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(4622210..4622977) Mycobacterium avium 104 4527645 YP_883632.1 CDS MAV_4498 NC_008595.1 4622974 4623693 R identified by match to protein family HMM PF07848; match to protein family HMM PF08223; hypothetical protein complement(4622974..4623693) Mycobacterium avium 104 4527323 YP_883633.1 CDS MAV_4499 NC_008595.1 4623696 4624634 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(4623696..4624634) Mycobacterium avium 104 4529634 YP_883634.1 CDS MAV_4500 NC_008595.1 4624696 4626324 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(4624696..4626324) Mycobacterium avium 104 4529822 YP_883635.1 CDS MAV_4501 NC_008595.1 4626385 4627362 R Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV complement(4626385..4627362) Mycobacterium avium 104 4526182 YP_883636.1 CDS rpoC NC_008595.1 4627384 4631334 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(4627384..4631334) Mycobacterium avium 104 4529592 YP_883637.1 CDS rpoB NC_008595.1 4631379 4634813 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(4631379..4634813) Mycobacterium avium 104 4528498 YP_883638.1 CDS MAV_4504 NC_008595.1 4635284 4636294 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(4635284..4636294) Mycobacterium avium 104 4529673 YP_883639.1 CDS MAV_4505 NC_008595.1 4636466 4637971 R identified by match to protein family HMM PF03055; Sim14 protein complement(4636466..4637971) Mycobacterium avium 104 4528705 YP_883640.1 CDS MAV_4506 NC_008595.1 4638042 4638725 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4638042..4638725 Mycobacterium avium 104 4528283 YP_883641.1 CDS rplL NC_008595.1 4638786 4639178 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(4638786..4639178) Mycobacterium avium 104 4525555 YP_883642.1 CDS rplJ NC_008595.1 4639224 4639814 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(4639224..4639814) Mycobacterium avium 104 4528147 YP_883643.1 CDS MAV_4509 NC_008595.1 4640102 4640554 R hypothetical protein complement(4640102..4640554) Mycobacterium avium 104 4525529 YP_883644.1 CDS MAV_4510 NC_008595.1 4640564 4641484 R identified by match to protein family HMM PF00480; sugar kinase complement(4640564..4641484) Mycobacterium avium 104 4529088 YP_883645.1 CDS MAV_4511 NC_008595.1 4641490 4642107 R FabD2 protein complement(4641490..4642107) Mycobacterium avium 104 4528423 YP_883646.1 CDS MAV_4512 NC_008595.1 4642104 4646288 R identified by match to protein family HMM PF01074; match to protein family HMM PF07748; alpha-mannosidase complement(4642104..4646288) Mycobacterium avium 104 4529717 YP_883647.1 CDS MAV_4513 NC_008595.1 4646365 4646949 D identified by match to protein family HMM PF04978; hypothetical protein 4646365..4646949 Mycobacterium avium 104 4526159 YP_883648.1 CDS MAV_4514 NC_008595.1 4647015 4648349 D identified by match to protein family HMM PF03109; ABC transporter 4647015..4648349 Mycobacterium avium 104 4528575 YP_883649.1 CDS MAV_4515 NC_008595.1 4648358 4649266 D identified by match to protein family HMM PF00561; alpha/beta hydrolase 4648358..4649266 Mycobacterium avium 104 4528194 YP_883650.1 CDS MAV_4516 NC_008595.1 4649356 4650216 D identified by match to protein family HMM PF02353; methoxy mycolic acid synthase 1 4649356..4650216 Mycobacterium avium 104 4528728 YP_883651.1 CDS MAV_4517 NC_008595.1 4650301 4651197 D identified by match to protein family HMM PF02353; cyclopropane-fatty-acyl-phospholipid synthase 1 4650301..4651197 Mycobacterium avium 104 4530164 YP_883652.1 CDS MAV_4518 NC_008595.1 4651291 4651989 D identified by match to protein family HMM PF04946; DGPF domain-containing protein 4651291..4651989 Mycobacterium avium 104 4530498 YP_883653.1 CDS MAV_4519 NC_008595.1 4651994 4653256 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase ECF-subfamily protein sigma factor 4651994..4653256 Mycobacterium avium 104 4529786 YP_883654.1 CDS rplA NC_008595.1 4653277 4653984 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(4653277..4653984) Mycobacterium avium 104 4530745 YP_883655.1 CDS rplK NC_008595.1 4654120 4654548 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(4654120..4654548) Mycobacterium avium 104 4525499 YP_883656.1 CDS nusG NC_008595.1 4654595 4655365 R Modulates Rho-dependent transcription termination; transcription antitermination protein NusG complement(4654595..4655365) Mycobacterium avium 104 4527736 YP_883657.1 CDS secE NC_008595.1 4655408 4655851 R forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(4655408..4655851) Mycobacterium avium 104 4527620 YP_883658.1 CDS MAV_4525 NC_008595.1 4656161 4656664 R functions as a heterodimer along with HadB in fatty acid biosynthesis; fatty acid synthase type II; FAS-II; (3R)-hydroxyacyl-ACP dehydratase subunit HadC complement(4656161..4656664) Mycobacterium avium 104 4529605 YP_883659.1 CDS MAV_4526 NC_008595.1 4656668 4657072 R functions as a heterodimer along with HadA or HadC in fatty acid biosynthesis; fatty acid synthase type II; FAS-II; (3R)-hydroxyacyl-ACP dehydratase subunit HadB complement(4656668..4657072) Mycobacterium avium 104 4528289 YP_883660.1 CDS MAV_4527 NC_008595.1 4657083 4657562 R functions as a heterodimer along with HadB in fatty acid biosynthesis; fatty acid synthase type II; FAS-II; (3R)-hydroxyacyl-ACP dehydratase subunit HadA complement(4657083..4657562) Mycobacterium avium 104 4529655 YP_883661.1 CDS rpmG NC_008595.1 4657611 4657742 R identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; ribosomal protein L33 complement(4657611..4657742) Mycobacterium avium 104 4527481 YP_883662.1 CDS MAV_4531 NC_008595.1 4658107 4658313 R hypothetical protein complement(4658107..4658313) Mycobacterium avium 104 4530327 YP_883663.1 CDS MAV_4532 NC_008595.1 4658438 4659151 D identified by match to protein family HMM PF00753; metallo-beta-lactamase 4658438..4659151 Mycobacterium avium 104 4527355 YP_883664.1 CDS MAV_4533 NC_008595.1 4659222 4660055 D hypothetical protein 4659222..4660055 Mycobacterium avium 104 4526989 YP_883665.1 CDS MAV_4534 NC_008595.1 4660072 4660767 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4660072..4660767 Mycobacterium avium 104 4528439 YP_883666.1 CDS MAV_4535 NC_008595.1 4660820 4663186 D identified by match to protein family HMM PF00384; match to protein family HMM PF01568; nitrate reductase NarB 4660820..4663186 Mycobacterium avium 104 4528201 YP_883667.1 CDS MAV_4536 NC_008595.1 4663183 4663662 D hypothetical protein 4663183..4663662 Mycobacterium avium 104 4527883 YP_883668.1 CDS MAV_4537 NC_008595.1 4663750 4664772 R identified by match to protein family HMM PF01734; phospholipase, patatin family protein complement(4663750..4664772) Mycobacterium avium 104 4527698 YP_883669.1 CDS cynS NC_008595.1 4664773 4665240 R catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase complement(4664773..4665240) Mycobacterium avium 104 4527174 YP_883670.1 CDS MAV_4539 NC_008595.1 4665309 4666058 R identified by match to protein family HMM PF01170; match to protein family HMM PF05175; methyltransferase small domain-containing protein complement(4665309..4666058) Mycobacterium avium 104 4528915 YP_883671.1 CDS MAV_4540 NC_008595.1 4666110 4666625 R identified by match to protein family HMM PF00881; nitroreductase complement(4666110..4666625) Mycobacterium avium 104 4529194 YP_883672.1 CDS MAV_4541 NC_008595.1 4666888 4667754 D identified by match to protein family HMM PF02353; cyclopropane-fatty-acyl-phospholipid synthase 1 4666888..4667754 Mycobacterium avium 104 4527012 YP_883673.1 CDS recC NC_008595.1 4667794 4671084 D identified by match to protein family HMM PF04257; match to protein family HMM TIGR01450; exodeoxyribonuclease V, gamma subunit 4667794..4671084 Mycobacterium avium 104 4526117 YP_883674.1 CDS recB NC_008595.1 4671084 4674386 D identified by match to protein family HMM PF00580; match to protein family HMM TIGR00609; exodeoxyribonuclease V, beta subunit 4671084..4674386 Mycobacterium avium 104 4530332 YP_883675.1 CDS recD NC_008595.1 4674395 4676107 D identified by match to protein family HMM TIGR01447; exodeoxyribonuclease V, alpha subunit 4674395..4676107 Mycobacterium avium 104 4526807 YP_883676.1 CDS MAV_4545 NC_008595.1 4676116 4676817 D hypothetical protein 4676116..4676817 Mycobacterium avium 104 4528679 YP_883677.1 CDS MAV_4546 NC_008595.1 4676831 4678357 R identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; mce-family protein mce2f complement(4676831..4678357) Mycobacterium avium 104 4528101 YP_883678.1 CDS MAV_4547 NC_008595.1 4678373 4679551 R identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce complement(4678373..4679551) Mycobacterium avium 104 4529179 YP_883679.1 CDS MAV_4548 NC_008595.1 4679512 4681011 R identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce complement(4679512..4681011) Mycobacterium avium 104 4530808 YP_883680.1 CDS MAV_4549 NC_008595.1 4681008 4682450 R identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; mce-family protein mce2c complement(4681008..4682450) Mycobacterium avium 104 4530590 YP_883681.1 CDS MAV_4550 NC_008595.1 4682447 4683478 R identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce complement(4682447..4683478) Mycobacterium avium 104 4527509 YP_883682.1 CDS MAV_4551 NC_008595.1 4683475 4684689 R identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce complement(4683475..4684689) Mycobacterium avium 104 4529170 YP_883683.1 CDS MAV_4552 NC_008595.1 4684695 4685573 R identified by match to protein family HMM PF02405; hypothetical protein complement(4684695..4685573) Mycobacterium avium 104 4530298 YP_883684.1 CDS MAV_4553 NC_008595.1 4685575 4686357 R identified by match to protein family HMM PF02405; hypothetical protein complement(4685575..4686357) Mycobacterium avium 104 4529358 YP_883685.1 CDS MAV_4555 NC_008595.1 4687086 4687454 D identified by match to protein family HMM PF03693; match to protein family HMM TIGR02606; addiction module antidote protein, CC2985 family protein 4687086..4687454 Mycobacterium avium 104 4529855 YP_883686.1 CDS MAV_4556 NC_008595.1 4687517 4687828 D monooxygenase 4687517..4687828 Mycobacterium avium 104 4526417 YP_883687.1 CDS MAV_4557 NC_008595.1 4687839 4688786 R identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein complement(4687839..4688786) Mycobacterium avium 104 4529431 YP_883688.1 CDS MAV_4558 NC_008595.1 4688783 4689745 R identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein complement(4688783..4689745) Mycobacterium avium 104 4527377 YP_883689.1 CDS MAV_4559 NC_008595.1 4689915 4692290 D identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374; hypothetical protein 4689915..4692290 Mycobacterium avium 104 4530180 YP_883690.1 CDS MAV_4560 NC_008595.1 4692294 4694930 R identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; alpha-1,2-mannosidase complement(4692294..4694930) Mycobacterium avium 104 4526236 YP_883691.1 CDS MAV_4561 NC_008595.1 4695141 4695800 D LpqN protein 4695141..4695800 Mycobacterium avium 104 4529830 YP_883692.1 CDS MAV_4562 NC_008595.1 4695813 4696505 R identified by match to protein family HMM PF03861; ANTAR domain-containing protein complement(4695813..4696505) Mycobacterium avium 104 4525839 YP_883693.1 CDS MAV_4563 NC_008595.1 4696692 4697447 R identified by match to protein family HMM PF01927; hypothetical protein complement(4696692..4697447) Mycobacterium avium 104 4528568 YP_883694.1 CDS galK NC_008595.1 4697444 4698535 R catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase complement(4697444..4698535) Mycobacterium avium 104 4528060 YP_883695.1 CDS galT NC_008595.1 4698532 4699641 R identified by match to protein family HMM PF01087; match to protein family HMM PF02744; match to protein family HMM TIGR00209; galactose-1-phosphate uridylyltransferase complement(4698532..4699641) Mycobacterium avium 104 4526438 YP_883696.1 CDS MAV_4566 NC_008595.1 4699742 4701925 D hypothetical protein 4699742..4701925 Mycobacterium avium 104 4528682 YP_883697.1 CDS MAV_4567 NC_008595.1 4701965 4702834 R identified by match to protein family HMM PF00561; dihydrolipoyllysine-residue acetyltransferase component of acetoincleaving system complement(4701965..4702834) Mycobacterium avium 104 4529536 YP_883698.1 CDS MAV_4568 NC_008595.1 4702909 4703763 D identified by match to protein family HMM PF01936; hypothetical protein 4702909..4703763 Mycobacterium avium 104 4527786 YP_883699.1 CDS MAV_4569 NC_008595.1 4703960 4705189 D identified by match to protein family HMM PF00067; cytochrome P450 superfamily protein 4703960..4705189 Mycobacterium avium 104 4527850 YP_883700.1 CDS MAV_4570 NC_008595.1 4705375 4706604 D hypothetical protein 4705375..4706604 Mycobacterium avium 104 4526479 YP_883701.1 CDS MAV_4571 NC_008595.1 4706607 4707905 R identified by match to protein family HMM PF01566; metal ion transporter, NRAMP family protein complement(4706607..4707905) Mycobacterium avium 104 4527757 YP_883702.1 CDS MAV_4573 NC_008595.1 4708167 4709108 D identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase 4708167..4709108 Mycobacterium avium 104 4529912 YP_883703.1 CDS MAV_4572 NC_008595.1 4709105 4709524 R hypothetical protein complement(4709105..4709524) Mycobacterium avium 104 4529649 YP_883704.1 CDS MAV_4575 NC_008595.1 4710000 4710491 D nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 4710000..4710491 Mycobacterium avium 104 4526042 YP_883705.1 CDS MAV_4576 NC_008595.1 4710618 4712138 D monooxygenase, flavin-binding family protein 4710618..4712138 Mycobacterium avium 104 4530010 YP_883706.1 CDS MAV_4577 NC_008595.1 4712207 4713232 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 4712207..4713232 Mycobacterium avium 104 4527966 YP_883707.1 CDS MAV_4578 NC_008595.1 4713477 4715012 D identified by match to protein family HMM PF00860; match to protein family HMM PF00916; carbonate dehydratase 4713477..4715012 Mycobacterium avium 104 4530374 YP_883708.1 CDS MAV_4579 NC_008595.1 4715030 4715290 R identified by match to protein family HMM PF01381; transcriptional regulator complement(4715030..4715290) Mycobacterium avium 104 4528344 YP_883709.1 CDS MAV_4580 NC_008595.1 4715394 4716257 R metalloprotease; heat shock protein HtpX complement(4715394..4716257) Mycobacterium avium 104 4527007 YP_883710.1 CDS MAV_4581 NC_008595.1 4716351 4717328 R identified by match to protein family HMM PF00348; polyprenyl synthetase complement(4716351..4717328) Mycobacterium avium 104 4527563 YP_883711.1 CDS MAV_4582 NC_008595.1 4717375 4718619 D identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF04820; match to protein family HMM PF05834; match to protein family HMM PF07992; match to protein family HMM TIGR02032; FAD dependent oxidoreductase, putative 4717375..4718619 Mycobacterium avium 104 4528639 YP_883712.1 CDS MAV_4583 NC_008595.1 4718652 4719056 D identified by match to protein family HMM PF05305; hypothetical protein 4718652..4719056 Mycobacterium avium 104 4527668 YP_883713.1 CDS ubiE NC_008595.1 4719064 4719807 R Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase complement(4719064..4719807) Mycobacterium avium 104 4529061 YP_883714.1 CDS MAV_4585 NC_008595.1 4719839 4720024 D short chain dehydrogenase 4719839..4720024 Mycobacterium avium 104 4526430 YP_883715.1 CDS MAV_4586 NC_008595.1 4720041 4721195 R identified by match to protein family HMM PF00534; glycosyl transferase complement(4720041..4721195) Mycobacterium avium 104 4530707 YP_883716.1 CDS MAV_4587 NC_008595.1 4721247 4721750 R hypothetical protein complement(4721247..4721750) Mycobacterium avium 104 4526754 YP_883717.1 CDS MAV_4588 NC_008595.1 4721768 4723405 R SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase complement(4721768..4723405) Mycobacterium avium 104 4529506 YP_883718.1 CDS MAV_4589 NC_008595.1 4723501 4724286 R identified by match to protein family HMM PF00561; alpha/beta hydrolase complement(4723501..4724286) Mycobacterium avium 104 4527658 YP_883719.1 CDS MAV_4590 NC_008595.1 4724283 4725263 R catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase complement(4724283..4725263) Mycobacterium avium 104 4529124 YP_883720.1 CDS MAV_4591 NC_008595.1 4725260 4726870 R identified by match to protein family HMM PF07969; amidohydrolase complement(4725260..4726870) Mycobacterium avium 104 4530208 YP_883721.1 CDS MAV_4592 NC_008595.1 4726983 4728584 D activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 4726983..4728584 Mycobacterium avium 104 4530521 YP_883722.1 CDS MAV_4593 NC_008595.1 4728826 4729365 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(4728826..4729365) Mycobacterium avium 104 4526703 YP_883723.1 CDS MAV_4594 NC_008595.1 4729454 4730374 D identified by match to protein family HMM PF00248; oxidoreductase YdbC 4729454..4730374 Mycobacterium avium 104 4530213 YP_883724.1 CDS MAV_4595 NC_008595.1 4730361 4730816 D identified by match to protein family HMM TIGR00026; mycobacterium tuberculosis paralogous family protein 11; cell entry (mce) related family protein 4730361..4730816 Mycobacterium avium 104 4529551 YP_883725.1 CDS menB NC_008595.1 4730860 4731723 D catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 4730860..4731723 Mycobacterium avium 104 4526916 YP_883726.1 CDS MAV_4597 NC_008595.1 4731881 4732777 D identified by match to protein family HMM PF00106; short chain dehydrogenase 4731881..4732777 Mycobacterium avium 104 4529675 YP_883727.1 CDS MAV_4598 NC_008595.1 4732805 4733212 D identified by match to protein family HMM PF00903; hypothetical protein 4732805..4733212 Mycobacterium avium 104 4529603 YP_883728.1 CDS MAV_4599 NC_008595.1 4733310 4734551 D identified by match to protein family HMM PF01384; phosphate transporter 4733310..4734551 Mycobacterium avium 104 4529351 YP_883729.1 CDS MAV_4600 NC_008595.1 4734548 4734856 D hypothetical protein 4734548..4734856 Mycobacterium avium 104 4525754 YP_883730.1 CDS MAV_4601 NC_008595.1 4734970 4735215 D hypothetical protein 4734970..4735215 Mycobacterium avium 104 4530635 YP_883731.1 CDS MAV_4602 NC_008595.1 4735284 4736375 D identified by match to protein family HMM PF00501; O-succinylbenzoic acid--CoA ligase 4735284..4736375 Mycobacterium avium 104 4527063 YP_883732.1 CDS MAV_4603 NC_008595.1 4736411 4737763 D integral membrane protein 4736411..4737763 Mycobacterium avium 104 4528104 YP_883733.1 CDS MAV_4604 NC_008595.1 4737772 4738428 R hypothetical protein complement(4737772..4738428) Mycobacterium avium 104 4526038 YP_883734.1 CDS MAV_4605 NC_008595.1 4738425 4739087 R identified by match to protein family HMM PF00535; glycosyltransferase complement(4738425..4739087) Mycobacterium avium 104 4529180 YP_883735.1 CDS MAV_4606 NC_008595.1 4739091 4740761 R hypothetical protein complement(4739091..4740761) Mycobacterium avium 104 4529421 YP_883736.1 CDS MAV_4607 NC_008595.1 4740843 4740995 R hypothetical protein complement(4740843..4740995) Mycobacterium avium 104 4528618 YP_883737.1 CDS MAV_4608 NC_008595.1 4741071 4742798 D hypothetical protein 4741071..4742798 Mycobacterium avium 104 4526880 YP_883738.1 CDS MAV_4609 NC_008595.1 4742802 4743824 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase complement(4742802..4743824) Mycobacterium avium 104 4527603 YP_883739.1 CDS mtaP NC_008595.1 4743827 4744621 R Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate; 5'-methylthioadenosine phosphorylase complement(4743827..4744621) Mycobacterium avium 104 4526800 YP_883740.1 CDS menA NC_008595.1 4744673 4745545 D catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 4744673..4745545 Mycobacterium avium 104 4528635 YP_883741.1 CDS MAV_4612 NC_008595.1 4745629 4746636 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 4745629..4746636 Mycobacterium avium 104 4525532 YP_883742.1 CDS MAV_4613 NC_008595.1 4746641 4746967 R hypothetical protein complement(4746641..4746967) Mycobacterium avium 104 4527044 YP_883743.1 CDS MAV_4614 NC_008595.1 4747023 4747184 D hypothetical protein 4747023..4747184 Mycobacterium avium 104 4527862 YP_883744.1 CDS MAV_4615 NC_008595.1 4747219 4748517 R hypothetical protein complement(4747219..4748517) Mycobacterium avium 104 4526592 YP_883745.1 CDS ccsB NC_008595.1 4748562 4749539 R identified by match to protein family HMM PF01578; match to protein family HMM TIGR03144; cytochrome C-type biogenesis protein CcsB complement(4748562..4749539) Mycobacterium avium 104 4529445 YP_883746.1 CDS MAV_4617 NC_008595.1 4749536 4751176 R identified by match to protein family HMM PF05140; hypothetical protein complement(4749536..4751176) Mycobacterium avium 104 4527264 YP_883747.1 CDS MAV_4618 NC_008595.1 4751176 4751955 R identified by match to protein family HMM PF02683; cytochrome C biogenesis protein transmembrane region complement(4751176..4751955) Mycobacterium avium 104 4529076 YP_883748.1 CDS MAV_4619 NC_008595.1 4751952 4752545 R hypothetical protein complement(4751952..4752545) Mycobacterium avium 104 4525748 YP_883749.1 CDS MAV_4620 NC_008595.1 4752542 4753150 R identified by match to protein family HMM PF00300; phosphoglycerate mutase complement(4752542..4753150) Mycobacterium avium 104 4526579 YP_883750.1 CDS hemL NC_008595.1 4753150 4754487 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(4753150..4754487) Mycobacterium avium 104 4525711 YP_883751.1 CDS MAV_4622 NC_008595.1 4754546 4754890 R hypothetical protein complement(4754546..4754890) Mycobacterium avium 104 4529762 YP_883752.1 CDS MAV_4623 NC_008595.1 4754932 4755360 D identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 4754932..4755360 Mycobacterium avium 104 4530593 YP_883753.1 CDS MAV_4624 NC_008595.1 4755371 4756552 D identified by match to protein family HMM PF01188; mandelate racemase/muconate lactonizing enzyme 4755371..4756552 Mycobacterium avium 104 4527054 YP_883754.1 CDS panE NC_008595.1 4756549 4757466 D identified by match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF03721; match to protein family HMM PF03807; match to protein family HMM TIGR00745; 2-dehydropantoate 2-reductase 4756549..4757466 Mycobacterium avium 104 4526939 YP_883755.1 CDS MAV_4626 NC_008595.1 4757537 4758886 R identified by match to protein family HMM PF00324; gaba permease complement(4757537..4758886) Mycobacterium avium 104 4527410 YP_883756.1 CDS MAV_4627 NC_008595.1 4758947 4760296 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily protein complement(4758947..4760296) Mycobacterium avium 104 4528179 YP_883757.1 CDS MAV_4628 NC_008595.1 4760302 4761447 R identified by similarity to SP:P40402; alkanesulfonate monoxygenase complement(4760302..4761447) Mycobacterium avium 104 4526611 YP_883758.1 CDS MAV_4629 NC_008595.1 4761939 4762769 D identified by match to protein family HMM PF00756; esterase 4761939..4762769 Mycobacterium avium 104 4530419 YP_883759.1 CDS MAV_4630 NC_008595.1 4762821 4764941 D identified by match to protein family HMM PF01757; acyltransferase domain-containing protein 4762821..4764941 Mycobacterium avium 104 4527284 YP_883760.1 CDS MAV_4631 NC_008595.1 4765007 4765123 D hypothetical protein 4765007..4765123 Mycobacterium avium 104 4529416 YP_883761.1 CDS MAV_4632 NC_008595.1 4765132 4765821 R identified by match to protein family HMM PF00657; hypothetical protein complement(4765132..4765821) Mycobacterium avium 104 4529329 YP_883762.1 CDS MAV_4633 NC_008595.1 4765912 4767150 R identified by match to protein family HMM PF01757; acyltransferase, putative complement(4765912..4767150) Mycobacterium avium 104 4527181 YP_883763.1 CDS MAV_4635 NC_008595.1 4767516 4767956 D identified by match to protein family HMM PF01740; STAS domain-containing protein 4767516..4767956 Mycobacterium avium 104 4527276 YP_883764.1 CDS MAV_4634 NC_008595.1 4767940 4768200 R transmembrane protein complement(4767940..4768200) Mycobacterium avium 104 4525955 YP_883765.1 CDS MAV_4636 NC_008595.1 4768197 4768682 R hypothetical protein complement(4768197..4768682) Mycobacterium avium 104 4528554 YP_883766.1 CDS hemB NC_008595.1 4768771 4769658 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(4768771..4769658) Mycobacterium avium 104 4526609 YP_883767.1 CDS hemD NC_008595.1 4769758 4771371 R identified by match to protein family HMM PF00590; match to protein family HMM PF02602; uroporphyrinogen-III synthase complement(4769758..4771371) Mycobacterium avium 104 4528488 YP_883768.1 CDS hemC NC_008595.1 4771440 4772387 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(4771440..4772387) Mycobacterium avium 104 4526542 YP_883769.1 CDS hemA NC_008595.1 4772401 4773780 R catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase complement(4772401..4773780) Mycobacterium avium 104 4525577 YP_883770.1 CDS MAV_4641 NC_008595.1 4773891 4774160 R identified by match to protein family HMM PF05768; hypothetical protein complement(4773891..4774160) Mycobacterium avium 104 4527577 YP_883771.1 CDS MAV_4642 NC_008595.1 4774220 4774528 D identified by match to protein family HMM PF06013; hypothetical protein 4774220..4774528 Mycobacterium avium 104 4528718 YP_883772.1 CDS MAV_4643 NC_008595.1 4774521 4774811 D hypothetical protein 4774521..4774811 Mycobacterium avium 104 4529000 YP_883773.1 CDS MAV_4644 NC_008595.1 4774816 4777293 D hypothetical protein 4774816..4777293 Mycobacterium avium 104 4529138 YP_883774.1 CDS MAV_4645 NC_008595.1 4778033 4778944 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; HAD-superfamily protein subfamily protein IB hydrolase 4778033..4778944 Mycobacterium avium 104 4528921 YP_883775.1 CDS MAV_4646 NC_008595.1 4778989 4779513 D hypothetical protein 4778989..4779513 Mycobacterium avium 104 4527157 YP_883776.1 CDS MAV_4647 NC_008595.1 4779514 4780413 D identified by match to protein family HMM PF02353; cyclopropane-fatty-acyl-phospholipid synthase 2 4779514..4780413 Mycobacterium avium 104 4529164 YP_883777.1 CDS MAV_4648 NC_008595.1 4780513 4781577 R identified by match to protein family HMM PF01553; acyltransferase complement(4780513..4781577) Mycobacterium avium 104 4526073 YP_883778.1 CDS MAV_4649 NC_008595.1 4781583 4782710 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; NAD dependent epimerase/dehydratase complement(4781583..4782710) Mycobacterium avium 104 4528282 YP_883779.1 CDS MAV_4650 NC_008595.1 4782762 4782863 R identified by match to protein family HMM PF08213; hypothetical protein complement(4782762..4782863) Mycobacterium avium 104 4528607 YP_883780.1 CDS MAV_4651 NC_008595.1 4782998 4783135 R identified by match to protein family HMM TIGR01764; hypothetical protein complement(4782998..4783135) Mycobacterium avium 104 4525573 YP_883781.1 CDS proC NC_008595.1 4783394 4784281 R catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase complement(4783394..4784281) Mycobacterium avium 104 4529697 YP_883782.1 CDS MAV_4653 NC_008595.1 4784297 4785139 R hypothetical protein complement(4784297..4785139) Mycobacterium avium 104 4528789 YP_883783.1 CDS MAV_4654 NC_008595.1 4785164 4786006 R identified by match to protein family HMM PF01261; hypothetical protein complement(4785164..4786006) Mycobacterium avium 104 4529860 YP_883784.1 CDS MAV_4655 NC_008595.1 4786022 4786990 R hypothetical protein complement(4786022..4786990) Mycobacterium avium 104 4526207 YP_883785.1 CDS MAV_4656 NC_008595.1 4786987 4788003 R identified by match to protein family HMM PF02541; Ppx/GppA phosphatase complement(4786987..4788003) Mycobacterium avium 104 4529312 YP_883786.1 CDS MAV_4657 NC_008595.1 4788122 4788925 D hypothetical protein 4788122..4788925 Mycobacterium avium 104 4529648 YP_883787.1 CDS MAV_4658 NC_008595.1 4788945 4789889 D hypothetical protein 4788945..4789889 Mycobacterium avium 104 4528634 YP_883788.1 CDS MAV_4659 NC_008595.1 4789886 4790386 D identified by match to protein family HMM PF00293; hydrolase, nudix family protein, putative 4789886..4790386 Mycobacterium avium 104 4527162 YP_883789.1 CDS MAV_4660 NC_008595.1 4790387 4791070 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(4790387..4791070) Mycobacterium avium 104 4528904 YP_883790.1 CDS MAV_4661 NC_008595.1 4791332 4792555 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; hisitidine protein kinase SenX3 complement(4791332..4792555) Mycobacterium avium 104 4526122 YP_883791.1 CDS gpmA NC_008595.1 4792726 4793475 R 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(4792726..4793475) Mycobacterium avium 104 4527708 YP_883792.1 CDS MAV_4663 NC_008595.1 4793529 4794038 R hypothetical protein complement(4793529..4794038) Mycobacterium avium 104 4526856 YP_883793.1 CDS MAV_4664 NC_008595.1 4794035 4795309 R identified by match to protein family HMM PF00534; hypothetical protein complement(4794035..4795309) Mycobacterium avium 104 4530002 YP_883794.1 CDS MAV_4665 NC_008595.1 4795373 4796659 R identified by match to protein family HMM PF00480; ROK family protein complement(4795373..4796659) Mycobacterium avium 104 4527624 YP_883795.1 CDS MAV_4667 NC_008595.1 4796886 4797635 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; oxidoreductase 4796886..4797635 Mycobacterium avium 104 4528245 YP_883796.1 CDS MAV_4666 NC_008595.1 4797619 4798950 R identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein complement(4797619..4798950) Mycobacterium avium 104 4529666 YP_883797.1 CDS murB NC_008595.1 4799032 4800150 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(4799032..4800150) Mycobacterium avium 104 4529192 YP_883798.1 CDS MAV_4670 NC_008595.1 4800845 4801669 D identified by match to protein family HMM PF00795; carbon-nitrogen hydrolase 4800845..4801669 Mycobacterium avium 104 4529463 YP_883799.1 CDS MAV_4671 NC_008595.1 4801666 4802724 D hypothetical protein 4801666..4802724 Mycobacterium avium 104 4528895 YP_883800.1 CDS deoC NC_008595.1 4802737 4803408 R catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase complement(4802737..4803408) Mycobacterium avium 104 4528214 YP_883801.1 CDS MAV_4673 NC_008595.1 4803405 4803830 R hypothetical protein complement(4803405..4803830) Mycobacterium avium 104 4527901 YP_883802.1 CDS MAV_4674 NC_008595.1 4803835 4804098 R hypothetical protein complement(4803835..4804098) Mycobacterium avium 104 4527837 YP_883803.1 CDS MAV_4675 NC_008595.1 4804211 4804828 R heparin binding hemagglutinin hbha complement(4804211..4804828) Mycobacterium avium 104 4525522 YP_883804.1 CDS MAV_4676 NC_008595.1 4805033 4805449 R identified by match to protein family HMM PF01381; XRE family transcriptional regulator complement(4805033..4805449) Mycobacterium avium 104 4530344 YP_883805.1 CDS MAV_4677 NC_008595.1 4805533 4806843 R identified by match to protein family HMM PF04286; hypothetical protein complement(4805533..4806843) Mycobacterium avium 104 4530788 YP_883806.1 CDS MAV_4678 NC_008595.1 4807012 4807686 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4807012..4807686 Mycobacterium avium 104 4528248 YP_883807.1 CDS MAV_4679 NC_008595.1 4807828 4808688 D identified by match to protein family HMM PF02353; cyclopropane-fatty-acyl-phospholipid synthase 1 4807828..4808688 Mycobacterium avium 104 4525736 YP_883808.1 CDS MAV_4680 NC_008595.1 4808707 4809576 R identified by match to protein family HMM PF02353; methoxy mycolic acid synthase 1 complement(4808707..4809576) Mycobacterium avium 104 4529925 YP_883809.1 CDS MAV_4681 NC_008595.1 4809655 4810548 R converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase complement(4809655..4810548) Mycobacterium avium 104 4526344 YP_883810.1 CDS aceA NC_008595.1 4810799 4812085 R identified by match to protein family HMM PF00463; match to protein family HMM TIGR01346; isocitrate lyase complement(4810799..4812085) Mycobacterium avium 104 4526403 YP_883811.1 CDS MAV_4683 NC_008595.1 4812354 4813130 R identified by match to protein family HMM PF01643; acyl-ACP thioesterase complement(4812354..4813130) Mycobacterium avium 104 4530749 YP_883812.1 CDS MAV_4684 NC_008595.1 4813310 4814734 D identified by match to protein family HMM PF01381; match to protein family HMM PF06114; DNA-binding protein 4813310..4814734 Mycobacterium avium 104 4527233 YP_883813.1 CDS pcaC NC_008595.1 4814731 4815288 D identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; hypothetical protein 4814731..4815288 Mycobacterium avium 104 4530062 YP_883814.1 CDS MAV_4686 NC_008595.1 4815296 4815577 R hypothetical protein complement(4815296..4815577) Mycobacterium avium 104 4528436 YP_883815.1 CDS lpdA NC_008595.1 4815588 4816985 R E3 component of alpha keto acid dehydrogenase complexes LpdC; forms a homodimer; binds one molecule of FAD monomer; catalyzes NAD+-dependent oxidation of dihydrolipoyl cofactors that are covalently linked to the E2 component; dihydrolipoamide dehydrogenase complement(4815588..4816985) Mycobacterium avium 104 4527721 YP_883816.1 CDS MAV_4688 NC_008595.1 4817074 4817637 R hypothetical protein complement(4817074..4817637) Mycobacterium avium 104 4529079 YP_883817.1 CDS MAV_4689 NC_008595.1 4817630 4817908 R hypothetical protein complement(4817630..4817908) Mycobacterium avium 104 4527839 YP_883818.1 CDS MAV_4690 NC_008595.1 4817937 4818419 R identified by match to protein family HMM PF05610; hypothetical protein complement(4817937..4818419) Mycobacterium avium 104 4528976 YP_883819.1 CDS MAV_4691 NC_008595.1 4818420 4819943 R identified by match to protein family HMM PF00171; eptc-inducible aldehyde dehydrogenase complement(4818420..4819943) Mycobacterium avium 104 4528103 YP_883820.1 CDS MAV_4693 NC_008595.1 4822059 4822367 D hypothetical protein 4822059..4822367 Mycobacterium avium 104 4530371 YP_883821.1 CDS MAV_4694 NC_008595.1 4822377 4823288 D catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4822377..4823288 Mycobacterium avium 104 4527349 YP_883822.1 CDS MAV_4695 NC_008595.1 4823450 4823818 D hypothetical protein 4823450..4823818 Mycobacterium avium 104 4528796 YP_883823.1 CDS MAV_4696 NC_008595.1 4823844 4826774 R identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; MmpL4 protein complement(4823844..4826774) Mycobacterium avium 104 4530605 YP_883824.1 CDS MAV_4697 NC_008595.1 4826771 4827319 R identified by match to protein family HMM PF05423; membrane protein complement(4826771..4827319) Mycobacterium avium 104 4526519 YP_883825.1 CDS MAV_4698 NC_008595.1 4827342 4827944 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(4827342..4827944) Mycobacterium avium 104 4526710 YP_883826.1 CDS MAV_4700 NC_008595.1 4828108 4829838 D identified by match to protein family HMM PF02683; DipZ protein 4828108..4829838 Mycobacterium avium 104 4528490 YP_883827.1 CDS MAV_4699 NC_008595.1 4829825 4830673 R hypothetical protein complement(4829825..4830673) Mycobacterium avium 104 4527240 YP_883828.1 CDS MAV_4701 NC_008595.1 4830684 4831199 R hypothetical protein complement(4830684..4831199) Mycobacterium avium 104 4527544 YP_883829.1 CDS MAV_4702 NC_008595.1 4831210 4831575 R identified by match to protein family HMM PF00903; glyoxalase complement(4831210..4831575) Mycobacterium avium 104 4528816 YP_883830.1 CDS MAV_4703 NC_008595.1 4831623 4833353 D identified by match to protein family HMM PF07908; match to protein family HMM PF07969; amidohydrolase 4831623..4833353 Mycobacterium avium 104 4526020 YP_883831.1 CDS MAV_4704 NC_008595.1 4833391 4834035 D identified by match to protein family HMM PF00823; PPE family protein 4833391..4834035 Mycobacterium avium 104 4525931 YP_883832.1 CDS MAV_4705 NC_008595.1 4834063 4834455 D hypothetical protein 4834063..4834455 Mycobacterium avium 104 4528858 YP_883833.1 CDS MAV_4706 NC_008595.1 4834724 4835605 R hypothetical protein complement(4834724..4835605) Mycobacterium avium 104 4525784 YP_883834.1 CDS groEL NC_008595.1 4835762 4837387 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL complement(4835762..4837387) Mycobacterium avium 104 4527298 YP_883835.1 CDS MAV_4708 NC_008595.1 4837582 4838274 R identified by match to protein family HMM PF00557; aminopeptidase complement(4837582..4838274) Mycobacterium avium 104 4528257 YP_883836.1 CDS MAV_4709 NC_008595.1 4838306 4838800 D identified by match to protein family HMM PF07883; cupin domain-containing protein 4838306..4838800 Mycobacterium avium 104 4529091 YP_883837.1 CDS MAV_4710 NC_008595.1 4838832 4839770 D identified by match to protein family HMM PF00106; short chain dehydrogenase 4838832..4839770 Mycobacterium avium 104 4526634 YP_883838.1 CDS MAV_4711 NC_008595.1 4839776 4840990 D identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis protein MoeA 4839776..4840990 Mycobacterium avium 104 4527440 YP_883839.1 CDS MAV_4712 NC_008595.1 4840997 4842208 R identified by match to protein family HMM PF07690; transporter, major facilitator family protein complement(4840997..4842208) Mycobacterium avium 104 4526087 YP_883840.1 CDS psd NC_008595.1 4842229 4842951 D catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 4842229..4842951 Mycobacterium avium 104 4527311 YP_883841.1 CDS MAV_4714 NC_008595.1 4842948 4843811 D identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; CDP-diacylglycerol--serine O-phosphatidyltransferase 4842948..4843811 Mycobacterium avium 104 4528801 YP_883842.1 CDS MAV_4716 NC_008595.1 4843808 4845976 D identified by match to protein family HMM PF00004; match to protein family HMM PF02359; match to protein family HMM PF07728; cell division protein 48 4843808..4845976 Mycobacterium avium 104 4525973 YP_883843.1 CDS MAV_4715 NC_008595.1 4845950 4846516 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(4845950..4846516) Mycobacterium avium 104 4527824 YP_883844.1 CDS MAV_4718 NC_008595.1 4846568 4847350 D hypothetical protein 4846568..4847350 Mycobacterium avium 104 4526141 YP_883845.1 CDS MAV_4717 NC_008595.1 4847304 4848122 R identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase complement(4847304..4848122) Mycobacterium avium 104 4526927 YP_883846.1 CDS MAV_4719 NC_008595.1 4848119 4849141 R hypothetical protein complement(4848119..4849141) Mycobacterium avium 104 4526221 YP_883847.1 CDS MAV_4720 NC_008595.1 4849164 4849805 R identified by match to protein family HMM PF02190; ATP-dependent protease La complement(4849164..4849805) Mycobacterium avium 104 4528871 YP_883848.1 CDS MAV_4721 NC_008595.1 4849805 4850944 R ATP-dependent carboxylate-amine ligase; carboxylate-amine ligase complement(4849805..4850944) Mycobacterium avium 104 4530688 YP_883849.1 CDS sodC NC_008595.1 4850925 4851608 R identified by similarity to SP:P53635; match to protein family HMM PF00080; superoxide dismutase, Cu-Zn complement(4850925..4851608) Mycobacterium avium 104 4526253 YP_883850.1 CDS MAV_4723 NC_008595.1 4851639 4852070 R hypothetical protein complement(4851639..4852070) Mycobacterium avium 104 4525773 YP_883851.1 CDS MAV_4724 NC_008595.1 4852135 4852443 R hypothetical protein complement(4852135..4852443) Mycobacterium avium 104 4528489 YP_883852.1 CDS def NC_008595.1 4852685 4853218 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 4852685..4853218 Mycobacterium avium 104 4525659 YP_883853.1 CDS MAV_4726 NC_008595.1 4853218 4854021 D hypothetical protein 4853218..4854021 Mycobacterium avium 104 4526473 YP_883854.1 CDS xth NC_008595.1 4854032 4854850 D identified by match to protein family HMM PF03372; match to protein family HMM TIGR00633; exodeoxyribonuclease III 4854032..4854850 Mycobacterium avium 104 4529274 YP_883855.1 CDS MAV_4728 NC_008595.1 4855048 4855467 D hypothetical protein 4855048..4855467 Mycobacterium avium 104 4526639 YP_883856.1 CDS MAV_4729 NC_008595.1 4855469 4855663 R hypothetical protein complement(4855469..4855663) Mycobacterium avium 104 4530370 YP_883857.1 CDS MAV_4730 NC_008595.1 4855733 4856011 D hypothetical protein 4855733..4856011 Mycobacterium avium 104 4526569 YP_883858.1 CDS thiC NC_008595.1 4856213 4857835 D required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 4856213..4857835 Mycobacterium avium 104 4526790 YP_883859.1 CDS thiD NC_008595.1 4857832 4858680 D catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase 4857832..4858680 Mycobacterium avium 104 4527553 YP_883860.1 CDS MAV_4733 NC_008595.1 4858677 4859300 D hypothetical protein 4858677..4859300 Mycobacterium avium 104 4529832 YP_883861.1 CDS MAV_4734 NC_008595.1 4859347 4859781 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 4859347..4859781 Mycobacterium avium 104 4527663 YP_883862.1 CDS MAV_4735 NC_008595.1 4859798 4860673 D identified by match to protein family HMM PF00296; hypothetical protein 4859798..4860673 Mycobacterium avium 104 4530199 YP_883863.1 CDS MAV_4736 NC_008595.1 4860690 4862105 R LpqM protein complement(4860690..4862105) Mycobacterium avium 104 4526720 YP_883864.1 CDS MAV_4737 NC_008595.1 4862250 4863722 R identified by match to protein family HMM PF02225; match to protein family HMM PF04389; peptidase, M28 family protein complement(4862250..4863722) Mycobacterium avium 104 4530739 YP_883865.1 CDS MAV_4738 NC_008595.1 4863719 4865215 R identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389; peptidase, M28 family protein complement(4863719..4865215) Mycobacterium avium 104 4527578 YP_883866.1 CDS MAV_4739 NC_008595.1 4865269 4865694 R hypothetical protein complement(4865269..4865694) Mycobacterium avium 104 4527550 YP_883867.1 CDS MAV_4740 NC_008595.1 4865714 4866046 R hypothetical protein complement(4865714..4866046) Mycobacterium avium 104 4529368 YP_883868.1 CDS MAV_4741 NC_008595.1 4866381 4866911 D hypothetical protein 4866381..4866911 Mycobacterium avium 104 4526478 YP_883869.1 CDS MAV_4742 NC_008595.1 4866965 4867486 D hypothetical protein 4866965..4867486 Mycobacterium avium 104 4529901 YP_883870.1 CDS MAV_4743 NC_008595.1 4867490 4868257 R identified by match to protein family HMM PF00657; hypothetical protein complement(4867490..4868257) Mycobacterium avium 104 4528330 YP_883871.1 CDS thiG NC_008595.1 4868254 4869012 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(4868254..4869012) Mycobacterium avium 104 4525957 YP_883872.1 CDS thiS NC_008595.1 4869005 4869202 R with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS complement(4869005..4869202) Mycobacterium avium 104 4528495 YP_883873.1 CDS thiO NC_008595.1 4869252 4870268 R identified by match to protein family HMM PF01266; match to protein family HMM TIGR02352; glycine oxidase ThiO complement(4869252..4870268) Mycobacterium avium 104 4526748 YP_883874.1 CDS thiE NC_008595.1 4870409 4871080 D Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase 4870409..4871080 Mycobacterium avium 104 4529670 YP_883875.1 CDS MAV_4747 NC_008595.1 4871052 4871693 R identified by match to protein family HMM PF00293; hydrolase, NUDIX family protein complement(4871052..4871693) Mycobacterium avium 104 4529450 YP_883876.1 CDS MAV_4749 NC_008595.1 4871844 4873163 D hypothetical protein 4871844..4873163 Mycobacterium avium 104 4530746 YP_883877.1 CDS MAV_4750 NC_008595.1 4873136 4874140 D identified by match to protein family HMM PF00497; extracellular solute-binding protein, family protein 3 4873136..4874140 Mycobacterium avium 104 4526219 YP_883878.1 CDS MAV_4751 NC_008595.1 4874140 4876431 D identified by match to protein family HMM PF00069; serine/threonine protein kinase 4874140..4876431 Mycobacterium avium 104 4529212 YP_883879.1 CDS MAV_4753 NC_008595.1 4876491 4876604 D hypothetical protein 4876491..4876604 Mycobacterium avium 104 4527203 YP_883880.1 CDS MAV_4752 NC_008595.1 4876596 4877459 R hypothetical protein complement(4876596..4877459) Mycobacterium avium 104 4527328 YP_883881.1 CDS MAV_4754 NC_008595.1 4877520 4878152 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(4877520..4878152) Mycobacterium avium 104 4526367 YP_883882.1 CDS MAV_4755 NC_008595.1 4878158 4880971 R identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; MmpL4 protein complement(4878158..4880971) Mycobacterium avium 104 4525753 YP_883883.1 CDS MAV_4756 NC_008595.1 4881022 4881432 R identified by match to protein family HMM PF05423; membrane protein complement(4881022..4881432) Mycobacterium avium 104 4526458 YP_883884.1 CDS MAV_4757 NC_008595.1 4881628 4883010 D hypothetical protein 4881628..4883010 Mycobacterium avium 104 4525536 YP_883885.1 CDS MAV_4759 NC_008595.1 4883007 4884191 D identified by match to protein family HMM PF07394; match to protein family HMM TIGR01409; hypothetical protein 4883007..4884191 Mycobacterium avium 104 4530595 YP_883886.1 CDS ackA NC_008595.1 4884180 4885343 R AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase complement(4884180..4885343) Mycobacterium avium 104 4529093 YP_883887.1 CDS MAV_4760 NC_008595.1 4885333 4887420 R catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase complement(4885333..4887420) Mycobacterium avium 104 4526953 YP_883888.1 CDS MAV_4761 NC_008595.1 4887413 4888423 R identified by match to protein family HMM PF00296; F420-dependent glucose-6-phosphate dehydrogenase complement(4887413..4888423) Mycobacterium avium 104 4528777 YP_883889.1 CDS MAV_4762 NC_008595.1 4888459 4889202 D identified by match to protein family HMM PF00753; metallo-beta-lactamase 4888459..4889202 Mycobacterium avium 104 4528312 YP_883890.1 CDS MAV_4763 NC_008595.1 4889301 4889819 R identified by match to protein family HMM PF00583; acetyltransferase, gnat family protein complement(4889301..4889819) Mycobacterium avium 104 4527106 YP_883891.1 CDS MAV_4764 NC_008595.1 4889828 4890718 R identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein complement(4889828..4890718) Mycobacterium avium 104 4527321 YP_883892.1 CDS MAV_4765 NC_008595.1 4890738 4891109 R hypothetical protein complement(4890738..4891109) Mycobacterium avium 104 4530411 YP_883893.1 CDS MAV_4766 NC_008595.1 4891181 4891927 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase/reductase SDR 4891181..4891927 Mycobacterium avium 104 4526923 YP_883894.1 CDS MAV_4767 NC_008595.1 4891933 4893129 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4891933..4893129 Mycobacterium avium 104 4527438 YP_883895.1 CDS MAV_4768 NC_008595.1 4893146 4894294 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; long-chain specific acyl-CoA dehydrogenase 4893146..4894294 Mycobacterium avium 104 4525875 YP_883896.1 CDS MAV_4769 NC_008595.1 4894299 4894961 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4894299..4894961 Mycobacterium avium 104 4530262 YP_883897.1 CDS MAV_4770 NC_008595.1 4894966 4895586 D hypothetical protein 4894966..4895586 Mycobacterium avium 104 4525569 YP_883898.1 CDS MAV_4771 NC_008595.1 4896101 4896451 R hypothetical protein complement(4896101..4896451) Mycobacterium avium 104 4526004 YP_883899.1 CDS MAV_4772 NC_008595.1 4896440 4897831 D identified by match to protein family HMM PF00070; match to protein family HMM PF07992; DoxD family protein/pyridine nucleotide-disulfide oxidoreductase 4896440..4897831 Mycobacterium avium 104 4529729 YP_883900.1 CDS metZ NC_008595.1 4897837 4899063 R identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01325; O-succinylhomoserine sulfhydrylase complement(4897837..4899063) Mycobacterium avium 104 4528943 YP_883901.1 CDS MAV_4774 NC_008595.1 4899069 4899509 R hypothetical protein complement(4899069..4899509) Mycobacterium avium 104 4525862 YP_883902.1 CDS purT NC_008595.1 4899595 4900845 R non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 complement(4899595..4900845) Mycobacterium avium 104 4527895 YP_883903.1 CDS MAV_4776 NC_008595.1 4900911 4901549 R identified by match to protein family HMM PF03061; thioesterase complement(4900911..4901549) Mycobacterium avium 104 4526555 YP_883904.1 CDS purA NC_008595.1 4901546 4902844 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(4901546..4902844) Mycobacterium avium 104 4527504 YP_883905.1 CDS MAV_4778 NC_008595.1 4902952 4903893 R identified by match to protein family HMM PF00300; pe_pgrs family protein complement(4902952..4903893) Mycobacterium avium 104 4528549 YP_883906.1 CDS MAV_4779 NC_008595.1 4903903 4904031 D hypothetical protein 4903903..4904031 Mycobacterium avium 104 4529641 YP_883907.1 CDS MAV_4780 NC_008595.1 4904190 4904840 D hypothetical protein 4904190..4904840 Mycobacterium avium 104 4525918 YP_883908.1 CDS MAV_4781 NC_008595.1 4904850 4905632 D identified by match to protein family HMM PF02163; peptidase, M50 family protein 4904850..4905632 Mycobacterium avium 104 4529933 YP_883909.1 CDS MAV_4782 NC_008595.1 4905673 4906569 D identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cobalt-zinc-cadmium resistance protein 4905673..4906569 Mycobacterium avium 104 4527130 YP_883910.1 CDS MAV_4783 NC_008595.1 4906576 4906989 R hypothetical protein complement(4906576..4906989) Mycobacterium avium 104 4527955 YP_883911.1 CDS MAV_4784 NC_008595.1 4907113 4907991 D hypothetical protein 4907113..4907991 Mycobacterium avium 104 4529478 YP_883912.1 CDS MAV_4785 NC_008595.1 4908029 4908721 D membrane protein DedA family protein 4908029..4908721 Mycobacterium avium 104 4528358 YP_883913.1 CDS MAV_4786 NC_008595.1 4908729 4910078 R identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428; match to protein family HMM TIGR02429; succinyl-CoA:3-ketoacid-coenzyme A transferase 1 complement(4908729..4910078) Mycobacterium avium 104 4526594 YP_883914.1 CDS MAV_4787 NC_008595.1 4910075 4911214 R hypothetical protein complement(4910075..4911214) Mycobacterium avium 104 4529132 YP_883915.1 CDS MAV_4788 NC_008595.1 4911327 4911971 R identified by match to protein family HMM PF00588; spou rRNA methylase complement(4911327..4911971) Mycobacterium avium 104 4525632 YP_883916.1 CDS MAV_4789 NC_008595.1 4911968 4912828 R hypothetical protein complement(4911968..4912828) Mycobacterium avium 104 4529872 YP_883917.1 CDS pyrE NC_008595.1 4912880 4913419 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(4912880..4913419) Mycobacterium avium 104 4529938 YP_883918.1 CDS MAV_4791 NC_008595.1 4913406 4914179 R identified by match to protein family HMM PF00106; dehydrogenase complement(4913406..4914179) Mycobacterium avium 104 4528806 YP_883919.1 CDS MAV_4792 NC_008595.1 4914236 4915108 R hypothetical protein complement(4914236..4915108) Mycobacterium avium 104 4529620 YP_883920.1 CDS MAV_4793 NC_008595.1 4915249 4917795 R identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; chaperone ClpB complement(4915249..4917795) Mycobacterium avium 104 4530766 YP_883921.1 CDS MAV_4794 NC_008595.1 4917921 4918415 D hypothetical protein 4917921..4918415 Mycobacterium avium 104 4528265 YP_883922.1 CDS MAV_4795 NC_008595.1 4918448 4919629 D identified by match to protein family HMM PF00042; match to protein family HMM PF00175; match to protein family HMM PF00970; oxidoreductase FAD-binding subunit 4918448..4919629 Mycobacterium avium 104 4526709 YP_883923.1 CDS MAV_4796 NC_008595.1 4920515 4923574 R identified by match to protein family HMM PF01266; FAD dependent oxidoreductase domain-containing protein complement(4920515..4923574) Mycobacterium avium 104 4529014 YP_883924.1 CDS MAV_4798 NC_008595.1 4923571 4923972 R hypothetical protein complement(4923571..4923972) Mycobacterium avium 104 4526500 YP_883925.1 CDS MAV_4799 NC_008595.1 4923965 4924987 R hypothetical protein complement(4923965..4924987) Mycobacterium avium 104 4525922 YP_883926.1 CDS MAV_4800 NC_008595.1 4924984 4925253 R hypothetical protein complement(4924984..4925253) Mycobacterium avium 104 4529837 YP_883927.1 CDS MAV_4801 NC_008595.1 4925250 4925708 R hypothetical protein complement(4925250..4925708) Mycobacterium avium 104 4528729 YP_883928.1 CDS MAV_4802 NC_008595.1 4925705 4926892 R identified by match to protein family HMM PF00348; polyprenyl synthetase complement(4925705..4926892) Mycobacterium avium 104 4525645 YP_883929.1 CDS MAV_4803 NC_008595.1 4926889 4927662 R hypothetical protein complement(4926889..4927662) Mycobacterium avium 104 4526568 YP_883930.1 CDS MAV_4804 NC_008595.1 4927757 4932055 R identified by match to protein family HMM PF00211; match to protein family HMM PF01590; match to protein family HMM PF07719; GAF domain-containing protein complement(4927757..4932055) Mycobacterium avium 104 4529364 YP_883931.1 CDS MAV_4805 NC_008595.1 4932198 4932593 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(4932198..4932593) Mycobacterium avium 104 4527348 YP_883932.1 CDS dnaJ NC_008595.1 4932593 4933771 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(4932593..4933771) Mycobacterium avium 104 4526858 YP_883933.1 CDS MAV_4807 NC_008595.1 4933832 4934515 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(4933832..4934515) Mycobacterium avium 104 4527921 YP_883934.1 CDS dnaK NC_008595.1 4934512 4936383 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(4934512..4936383) Mycobacterium avium 104 4529845 YP_883935.1 CDS MAV_4809 NC_008595.1 4936626 4937225 D hypothetical protein 4936626..4937225 Mycobacterium avium 104 4528773 YP_883936.1 CDS MAV_4810 NC_008595.1 4937210 4937872 D hypothetical protein 4937210..4937872 Mycobacterium avium 104 4526949 YP_883937.1 CDS MAV_4811 NC_008595.1 4938008 4938592 D LpqJ protein 4938008..4938592 Mycobacterium avium 104 4526278 YP_883938.1 CDS MAV_4813 NC_008595.1 4941384 4942004 D hypothetical protein 4941384..4942004 Mycobacterium avium 104 4530767 YP_883939.1 CDS MAV_4814 NC_008595.1 4942305 4943654 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; metabolite/sugar transport protein complement(4942305..4943654) Mycobacterium avium 104 4528574 YP_883940.1 CDS MAV_4815 NC_008595.1 4944132 4944755 D hypothetical protein 4944132..4944755 Mycobacterium avium 104 4529069 YP_883941.1 CDS MAV_4816 NC_008595.1 4944810 4946507 D hypothetical protein 4944810..4946507 Mycobacterium avium 104 4526184 YP_883942.1 CDS MAV_4817 NC_008595.1 4946734 4949661 D identified by match to protein family HMM PF00037; match to protein family HMM PF02754; ferredoxin, 4Fe-4S 4946734..4949661 Mycobacterium avium 104 4530206 YP_883943.1 CDS MAV_4818 NC_008595.1 4949742 4950986 D broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 4949742..4950986 Mycobacterium avium 104 4526784 YP_883944.1 CDS MAV_4819 NC_008595.1 4951019 4952284 D identified by match to protein family HMM PF07907; hypothetical protein 4951019..4952284 Mycobacterium avium 104 4528082 YP_883945.1 CDS rfbA NC_008595.1 4952336 4953211 R identified by match to protein family HMM PF00483; match to protein family HMM TIGR01207; glucose-1-phosphate thymidylyltransferase complement(4952336..4953211) Mycobacterium avium 104 4529745 YP_883946.1 CDS MAV_4821 NC_008595.1 4953239 4953613 R hypothetical protein complement(4953239..4953613) Mycobacterium avium 104 4530219 YP_883947.1 CDS MAV_4822 NC_008595.1 4953643 4954437 R identified by match to protein family HMM PF07398; match to protein family HMM TIGR03083; hypothetical protein complement(4953643..4954437) Mycobacterium avium 104 4529883 YP_883948.1 CDS MAV_4823 NC_008595.1 4954494 4955807 R identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; UDP-glucose 6-dehydrogenase complement(4954494..4955807) Mycobacterium avium 104 4527436 YP_883949.1 CDS MAV_4824 NC_008595.1 4955958 4957406 R hypothetical protein complement(4955958..4957406) Mycobacterium avium 104 4528624 YP_883950.1 CDS MAV_4825 NC_008595.1 4957584 4958702 R hypothetical protein complement(4957584..4958702) Mycobacterium avium 104 4528954 YP_883951.1 CDS MAV_4826 NC_008595.1 4958875 4960347 R hypothetical protein complement(4958875..4960347) Mycobacterium avium 104 4528176 YP_883952.1 CDS MAV_4827 NC_008595.1 4960593 4962527 R hypothetical protein complement(4960593..4962527) Mycobacterium avium 104 4528866 YP_883953.1 CDS dcd NC_008595.1 4962634 4963206 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(4962634..4963206) Mycobacterium avium 104 4528384 YP_883954.1 CDS MAV_4829 NC_008595.1 4963236 4963694 R hypothetical protein complement(4963236..4963694) Mycobacterium avium 104 4525497 YP_883955.1 CDS MAV_4831 NC_008595.1 4964282 4964599 D hypothetical protein 4964282..4964599 Mycobacterium avium 104 4525705 YP_883956.1 CDS MAV_4832 NC_008595.1 4964596 4964886 D hypothetical protein 4964596..4964886 Mycobacterium avium 104 4529310 YP_883957.1 CDS MAV_4833 NC_008595.1 4964908 4965117 R hypothetical protein complement(4964908..4965117) Mycobacterium avium 104 4528059 YP_883958.1 CDS MAV_4834 NC_008595.1 4965697 4966461 D identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 4965697..4966461 Mycobacterium avium 104 4528409 YP_883959.1 CDS MAV_4835 NC_008595.1 4966623 4967165 R hypothetical protein complement(4966623..4967165) Mycobacterium avium 104 4528572 YP_883960.1 CDS MAV_4836 NC_008595.1 4967508 4967846 D identified by match to protein family HMM PF05305; hypothetical protein 4967508..4967846 Mycobacterium avium 104 4526041 YP_883961.1 CDS MAV_4837 NC_008595.1 4968076 4968372 D hypothetical protein 4968076..4968372 Mycobacterium avium 104 4528080 YP_883962.1 CDS MAV_4838 NC_008595.1 4968425 4969828 D identified by match to protein family HMM PF01232; match to protein family HMM PF08125; mannitol 2-dehydrogenase 4968425..4969828 Mycobacterium avium 104 4528119 YP_883963.1 CDS MAV_4840 NC_008595.1 4969902 4970684 D hypothetical protein 4969902..4970684 Mycobacterium avium 104 4528156 YP_883964.1 CDS MAV_4839 NC_008595.1 4970660 4971331 R hypothetical protein complement(4970660..4971331) Mycobacterium avium 104 4529946 YP_883965.1 CDS MAV_4841 NC_008595.1 4971392 4972045 R hypothetical protein complement(4971392..4972045) Mycobacterium avium 104 4525799 YP_883966.1 CDS MAV_4842 NC_008595.1 4972114 4972419 R hypothetical protein complement(4972114..4972419) Mycobacterium avium 104 4526966 YP_883967.1 CDS MAV_4843 NC_008595.1 4972496 4974016 D hypothetical protein 4972496..4974016 Mycobacterium avium 104 4528986 YP_883968.1 CDS MAV_4844 NC_008595.1 4974020 4974841 R identified by match to protein family HMM PF00722; glycosyl hydrolases family protein 16 complement(4974020..4974841) Mycobacterium avium 104 4528672 YP_883969.1 CDS MAV_4845 NC_008595.1 4974960 4975979 R identified by match to protein family HMM PF00107; oxidoreductase, zinc-binding complement(4974960..4975979) Mycobacterium avium 104 4528068 YP_883970.1 CDS MAV_4846 NC_008595.1 4976037 4976699 D hypothetical protein 4976037..4976699 Mycobacterium avium 104 4529356 YP_883971.1 CDS MAV_4847 NC_008595.1 4976703 4977089 R hypothetical protein complement(4976703..4977089) Mycobacterium avium 104 4529548 YP_883972.1 CDS MAV_4848 NC_008595.1 4977155 4978543 R hypothetical protein complement(4977155..4978543) Mycobacterium avium 104 4527409 YP_883973.1 CDS MAV_4850 NC_008595.1 4980816 4982042 R hypothetical protein complement(4980816..4982042) Mycobacterium avium 104 4525658 YP_883974.1 CDS MAV_4851 NC_008595.1 4982081 4982701 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4982081..4982701 Mycobacterium avium 104 4529293 YP_883975.1 CDS MAV_4852 NC_008595.1 4982706 4983185 D hypothetical protein 4982706..4983185 Mycobacterium avium 104 4530636 YP_883976.1 CDS MAV_4853 NC_008595.1 4983189 4983809 R hypothetical protein complement(4983189..4983809) Mycobacterium avium 104 4528067 YP_883977.1 CDS MAV_4854 NC_008595.1 4983947 4984591 R identified by match to protein family HMM PF01569; PAP2 superfamily protein complement(4983947..4984591) Mycobacterium avium 104 4525984 YP_883978.1 CDS MAV_4856 NC_008595.1 4984671 4985132 D hypothetical protein 4984671..4985132 Mycobacterium avium 104 4530779 YP_883979.1 CDS MAV_4855 NC_008595.1 4985116 4985400 R hypothetical protein complement(4985116..4985400) Mycobacterium avium 104 4529006 YP_883980.1 CDS bluB NC_008595.1 4985457 4986116 D identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476; cob(II)yrinic acid a,c-diamide reductase 4985457..4986116 Mycobacterium avium 104 4527638 YP_883981.1 CDS MAV_4858 NC_008595.1 4986186 4987616 D identified by match to protein family HMM PF00884; sulfatase 4986186..4987616 Mycobacterium avium 104 4526134 YP_883982.1 CDS MAV_4859 NC_008595.1 4987786 4988568 R catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; trans-aconitate 2-methyltransferase complement(4987786..4988568) Mycobacterium avium 104 4529650 YP_883983.1 CDS MAV_4861 NC_008595.1 4988738 4989937 D hypothetical protein 4988738..4989937 Mycobacterium avium 104 4529825 YP_883984.1 CDS MAV_4860 NC_008595.1 4989927 4990919 R hypothetical protein complement(4989927..4990919) Mycobacterium avium 104 4527110 YP_883985.1 CDS MAV_4862 NC_008595.1 4990916 4992322 R identified by match to protein family HMM PF00082; subtilase complement(4990916..4992322) Mycobacterium avium 104 4528717 YP_883986.1 CDS MAV_4863 NC_008595.1 4992319 4993761 R identified by match to protein family HMM PF04600; hypothetical protein complement(4992319..4993761) Mycobacterium avium 104 4529976 YP_883987.1 CDS MAV_4864 NC_008595.1 4993823 4994704 R hypothetical protein complement(4993823..4994704) Mycobacterium avium 104 4528182 YP_883988.1 CDS MAV_4865 NC_008595.1 4994725 4995018 R low molecular weight protein antigen 7 Cfp7 complement(4994725..4995018) Mycobacterium avium 104 4529678 YP_883989.1 CDS MAV_4866 NC_008595.1 4995056 4995343 R PE family protein complement(4995056..4995343) Mycobacterium avium 104 4529002 YP_883990.1 CDS MAV_4867 NC_008595.1 4995413 4996894 R identified by match to protein family HMM PF00823; PPE family protein complement(4995413..4996894) Mycobacterium avium 104 4528354 YP_883991.1 CDS MAV_4868 NC_008595.1 4996898 4997206 R identified by match to protein family HMM PF00934; PE family protein complement(4996898..4997206) Mycobacterium avium 104 4528424 YP_883992.1 CDS MAV_4870 NC_008595.1 5001170 5002804 R identified by match to protein family HMM PF05108; hypothetical protein complement(5001170..5002804) Mycobacterium avium 104 4527524 YP_883993.1 CDS MAV_4871 NC_008595.1 5002801 5004654 R identified by match to protein family HMM PF00004; ATPase AAA complement(5002801..5004654) Mycobacterium avium 104 4529515 YP_883994.1 CDS MAV_4872 NC_008595.1 5004984 5006450 R identified by match to protein family HMM PF00823; PPE family protein complement(5004984..5006450) Mycobacterium avium 104 4530064 YP_883995.1 CDS MAV_4873 NC_008595.1 5006630 5007535 R identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein complement(5006630..5007535) Mycobacterium avium 104 4525802 YP_883996.1 CDS MAV_4874 NC_008595.1 5007662 5008807 R identified by match to protein family HMM PF07683; CobW/P47K domain-containing protein complement(5007662..5008807) Mycobacterium avium 104 4529498 YP_883997.1 CDS rpmB NC_008595.1 5008961 5009197 D identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; ribosomal protein L28 5008961..5009197 Mycobacterium avium 104 4529128 YP_883998.2 CDS rpmG NC_008595.1 5009197 5009361 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 5009197..5009361 Mycobacterium avium 104 4530207 YP_883999.1 CDS MAV_4877 NC_008595.1 5009373 5010110 R hypothetical protein complement(5009373..5010110) Mycobacterium avium 104 4530533 YP_884000.1 CDS MAV_4878 NC_008595.1 5010110 5011102 R identified by match to protein family HMM PF03773; permease complement(5010110..5011102) Mycobacterium avium 104 4530241 YP_884001.1 CDS MAV_4879 NC_008595.1 5011141 5012724 R identified by match to protein family HMM PF00823; PPE family protein complement(5011141..5012724) Mycobacterium avium 104 4527680 YP_884002.1 CDS MAV_4880 NC_008595.1 5012819 5013763 R hypothetical protein complement(5012819..5013763) Mycobacterium avium 104 4527774 YP_884003.1 CDS MAV_4882 NC_008595.1 5013847 5014509 D FadD27 protein 5013847..5014509 Mycobacterium avium 104 4529163 YP_884004.1 CDS MAV_4881 NC_008595.1 5014506 5015858 R hypothetical protein complement(5014506..5015858) Mycobacterium avium 104 4528447 YP_884005.1 CDS MAV_4883 NC_008595.1 5015861 5017336 R identified by match to protein family HMM PF00668; condensation domain-containing protein complement(5015861..5017336) Mycobacterium avium 104 4529778 YP_884006.1 CDS MAV_4884 NC_008595.1 5017722 5018270 R hypothetical protein complement(5017722..5018270) Mycobacterium avium 104 4526464 YP_884007.1 CDS MAV_4885 NC_008595.1 5018296 5018877 R identified by match to protein family HMM PF00903; glyoxalase/bleomycin resistance protein/dioxygenase complement(5018296..5018877) Mycobacterium avium 104 4530684 YP_884008.1 CDS MAV_4886 NC_008595.1 5018972 5019628 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5018972..5019628 Mycobacterium avium 104 4528869 YP_884009.1 CDS MAV_4888 NC_008595.1 5021264 5023060 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 5021264..5023060 Mycobacterium avium 104 4525669 YP_884010.1 CDS MAV_4889 NC_008595.1 5023197 5023298 R hypothetical protein complement(5023197..5023298) Mycobacterium avium 104 4530278 YP_884011.1 CDS MAV_4890 NC_008595.1 5024058 5024444 R hypothetical protein complement(5024058..5024444) Mycobacterium avium 104 4527326 YP_884012.1 CDS MAV_4891 NC_008595.1 5024454 5026139 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(5024454..5026139) Mycobacterium avium 104 4528731 YP_884013.1 CDS MAV_4893 NC_008595.1 5026197 5027477 D hypothetical protein 5026197..5027477 Mycobacterium avium 104 4526346 YP_884014.1 CDS narK NC_008595.1 5027474 5028865 R identified by match to protein family HMM PF07690; match to protein family HMM TIGR00886; nitrite transporter complement(5027474..5028865) Mycobacterium avium 104 4529992 YP_884015.1 CDS MAV_4894 NC_008595.1 5029115 5029699 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5029115..5029699 Mycobacterium avium 104 4528217 YP_884016.1 CDS MAV_4895 NC_008595.1 5029811 5030764 D identified by match to protein family HMM PF01497; periplasmic binding protein 5029811..5030764 Mycobacterium avium 104 4529438 YP_884017.1 CDS MAV_4896 NC_008595.1 5030871 5031539 D identified by match to protein family HMM PF02682; allophanate hydrolase subunit 1 5030871..5031539 Mycobacterium avium 104 4527171 YP_884018.1 CDS MAV_4897 NC_008595.1 5031559 5032470 D identified by match to protein family HMM PF02626; match to protein family HMM TIGR00724; hypothetical protein 5031559..5032470 Mycobacterium avium 104 4527260 YP_884019.1 CDS MAV_4898 NC_008595.1 5032690 5032893 R hypothetical protein complement(5032690..5032893) Mycobacterium avium 104 4530683 YP_884020.1 CDS MAV_4899 NC_008595.1 5032879 5034270 D identified by match to protein family HMM PF07690; transporter, major facilitator family protein 5032879..5034270 Mycobacterium avium 104 4530742 YP_884021.1 CDS MAV_4900 NC_008595.1 5034348 5035511 D catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; bifunctional uroporphyrinogen-III synthetase/response regulator domain protein 5034348..5035511 Mycobacterium avium 104 4530775 YP_884022.1 CDS MAV_4901 NC_008595.1 5035502 5036275 D identified by match to protein family HMM PF01903; sirohydrochlorin cobaltochelatase, putative 5035502..5036275 Mycobacterium avium 104 4528005 YP_884023.1 CDS MAV_4902 NC_008595.1 5036349 5036759 D hypothetical protein 5036349..5036759 Mycobacterium avium 104 4529693 YP_884024.1 CDS nirD NC_008595.1 5036764 5037132 R identified by match to protein family HMM PF00355; match to protein family HMM TIGR02378; nitrite reductase [NAD(P)H], small subunit complement(5036764..5037132) Mycobacterium avium 104 4530094 YP_884025.1 CDS nirB NC_008595.1 5037156 5039657 R identified by match to protein family HMM PF00070; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM PF04324; match to protein family HMM PF07992; match to protein family HMM TIGR02374; nitrite reductase [NAD(P)H], large subunit complement(5037156..5039657) Mycobacterium avium 104 4530193 YP_884026.1 CDS MAV_4905 NC_008595.1 5039791 5039907 R hypothetical protein complement(5039791..5039907) Mycobacterium avium 104 4529597 YP_884027.1 CDS MAV_4906 NC_008595.1 5039951 5040391 D identified by match to protein family HMM PF00011; Hsp20/alpha crystallin family protein 5039951..5040391 Mycobacterium avium 104 4526356 YP_884028.1 CDS MAV_4907 NC_008595.1 5040618 5040932 D hypothetical protein 5040618..5040932 Mycobacterium avium 104 4526847 YP_884029.1 CDS MAV_4908 NC_008595.1 5041026 5041853 D integral membrane protein 5041026..5041853 Mycobacterium avium 104 4530480 YP_884030.1 CDS sdhA NC_008595.1 5041896 5043836 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 5041896..5043836 Mycobacterium avium 104 4530472 YP_884031.1 CDS MAV_4910 NC_008595.1 5043833 5044579 D catalyzes the fumarate and succinate interconversion; fumarate reductase is used under anaerobic conditions with glucose or glycerol as carbon source; fumarate reductase iron-sulfur subunit 5043833..5044579 Mycobacterium avium 104 4527927 YP_884032.1 CDS MAV_4911 NC_008595.1 5044690 5044854 D hypothetical protein 5044690..5044854 Mycobacterium avium 104 4528927 YP_884033.1 CDS MAV_4912 NC_008595.1 5044895 5045383 R identified by match to protein family HMM PF01613; NADH-FMN oxidoreductase complement(5044895..5045383) Mycobacterium avium 104 4529433 YP_884034.1 CDS MAV_4913 NC_008595.1 5045480 5046517 R identified by match to protein family HMM PF03171; oxidoreductase, 2OG-Fe(II) oxygenase complement(5045480..5046517) Mycobacterium avium 104 4527279 YP_884035.1 CDS MAV_4914 NC_008595.1 5046719 5048554 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 5046719..5048554 Mycobacterium avium 104 4526680 YP_884036.1 CDS MAV_4915 NC_008595.1 5048876 5050159 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(5048876..5050159) Mycobacterium avium 104 4529704 YP_884037.1 CDS fabG NC_008595.1 5050375 5051739 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 5050375..5051739 Mycobacterium avium 104 4527357 YP_884038.1 CDS MAV_4917 NC_008595.1 5051736 5052581 D identified by match to protein family HMM PF01575; MaoC like domain-containing protein 5051736..5052581 Mycobacterium avium 104 4527379 YP_884039.1 CDS MAV_4918 NC_008595.1 5052583 5053836 R identified by match to protein family HMM PF00654; chloride transporter, chloride channel (ClC) family protein complement(5052583..5053836) Mycobacterium avium 104 4529526 YP_884040.1 CDS MAV_4919 NC_008595.1 5053862 5054509 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(5053862..5054509) Mycobacterium avium 104 4527696 YP_884041.1 CDS MAV_4920 NC_008595.1 5054575 5055741 R identified by match to protein family HMM PF00933; glycosyl hydrolase 3 complement(5054575..5055741) Mycobacterium avium 104 4526633 YP_884042.1 CDS MAV_4921 NC_008595.1 5055754 5055981 R hypothetical protein complement(5055754..5055981) Mycobacterium avium 104 4530080 YP_884043.1 CDS MAV_4922 NC_008595.1 5056201 5056326 D secreted protein 5056201..5056326 Mycobacterium avium 104 4528985 YP_884044.1 CDS MAV_4923 NC_008595.1 5056400 5060581 D hypothetical protein 5056400..5060581 Mycobacterium avium 104 4530377 YP_884045.1 CDS MAV_4924 NC_008595.1 5060669 5062126 D identified by match to protein family HMM PF06762; integral membrane protein 5060669..5062126 Mycobacterium avium 104 4526441 YP_884046.1 CDS MAV_4925 NC_008595.1 5062310 5064106 R identified by match to protein family HMM PF00732; match to protein family HMM PF05199; glucose-methanol-choline complement(5062310..5064106) Mycobacterium avium 104 4529080 YP_884047.1 CDS katA NC_008595.1 5064326 5065780 R identified by similarity to SP:P26901; match to protein family HMM PF00199; catalase KatA complement(5064326..5065780) Mycobacterium avium 104 4528116 YP_884048.1 CDS katA NC_008595.1 5065806 5067263 R identified by similarity to SP:P26901; match to protein family HMM PF00199; catalase KatA complement(5065806..5067263) Mycobacterium avium 104 4526715 YP_884049.1 CDS MAV_4928 NC_008595.1 5067343 5067690 R hypothetical protein complement(5067343..5067690) Mycobacterium avium 104 4527972 YP_884050.1 CDS MAV_4929 NC_008595.1 5067679 5067819 D hypothetical protein 5067679..5067819 Mycobacterium avium 104 4528471 YP_884051.1 CDS MAV_4930 NC_008595.1 5068202 5069344 D Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen, nitrate, sulphate or fumarate; formate dehydrogenase 5068202..5069344 Mycobacterium avium 104 4525501 YP_884052.1 CDS MAV_4931 NC_008595.1 5069360 5070370 R hypothetical protein complement(5069360..5070370) Mycobacterium avium 104 4530478 YP_884053.1 CDS MAV_4932 NC_008595.1 5070545 5070913 R identified by match to protein family HMM PF00903; glyoxalase complement(5070545..5070913) Mycobacterium avium 104 4527924 YP_884054.1 CDS MAV_4933 NC_008595.1 5070954 5072168 R hypothetical protein complement(5070954..5072168) Mycobacterium avium 104 4525962 YP_884055.1 CDS MAV_4934 NC_008595.1 5072415 5073344 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(5072415..5073344) Mycobacterium avium 104 4530246 YP_884056.1 CDS MAV_4935 NC_008595.1 5073384 5075030 R catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis; acetolactate synthase complement(5073384..5075030) Mycobacterium avium 104 4527400 YP_884057.1 CDS gabD1 NC_008595.1 5075111 5076529 D NADP-dependent semialdehyde dehydrogenase; part of alternative pathway from alpha-ketoglutarate to succinate; succinic semialdehyde dehydrogenase 5075111..5076529 Mycobacterium avium 104 4526409 YP_884058.1 CDS MAV_4937 NC_008595.1 5076596 5077531 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta complement(5076596..5077531) Mycobacterium avium 104 4527931 YP_884059.1 CDS MAV_4938 NC_008595.1 5077528 5078211 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(5077528..5078211) Mycobacterium avium 104 4527324 YP_884060.1 CDS MAV_4939 NC_008595.1 5078415 5080124 R identified by match to protein family HMM PF00441; acyl-CoA dehydrogenase complement(5078415..5080124) Mycobacterium avium 104 4529556 YP_884061.1 CDS MAV_4940 NC_008595.1 5080310 5081230 D identified by match to protein family HMM PF02126; phosphotriesterase-like protein 5080310..5081230 Mycobacterium avium 104 4530555 YP_884062.1 CDS MAV_4941 NC_008595.1 5081264 5082445 R identified by match to protein family HMM PF01757; acyltransferase complement(5081264..5082445) Mycobacterium avium 104 4526714 YP_884063.1 CDS MAV_4942 NC_008595.1 5082612 5083868 D hypothetical protein 5082612..5083868 Mycobacterium avium 104 4526746 YP_884064.1 CDS MAV_4944 NC_008595.1 5083877 5085574 D hypothetical protein 5083877..5085574 Mycobacterium avium 104 4527115 YP_884065.1 CDS MAV_4943 NC_008595.1 5085558 5086706 R identified by match to protein family HMM PF00534; glycosyltransferase complement(5085558..5086706) Mycobacterium avium 104 4528559 YP_884066.1 CDS MAV_4945 NC_008595.1 5086812 5087573 D SAM-dependent methyltransferase 5086812..5087573 Mycobacterium avium 104 4526191 YP_884067.1 CDS MAV_4946 NC_008595.1 5087619 5089100 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase 5087619..5089100 Mycobacterium avium 104 4525756 YP_884068.1 CDS MAV_4947 NC_008595.1 5089416 5089547 D hypothetical protein 5089416..5089547 Mycobacterium avium 104 4528486 YP_884069.1 CDS MAV_4948 NC_008595.1 5089572 5090213 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5089572..5090213 Mycobacterium avium 104 4528426 YP_884070.1 CDS MAV_4949 NC_008595.1 5090215 5090511 R hypothetical protein complement(5090215..5090511) Mycobacterium avium 104 4527125 YP_884071.1 CDS MAV_4950 NC_008595.1 5090532 5092061 R identified by match to protein family HMM PF00501; AMP-dependent synthetase and ligase complement(5090532..5092061) Mycobacterium avium 104 4529539 YP_884072.1 CDS MAV_4951 NC_008595.1 5092149 5092943 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(5092149..5092943) Mycobacterium avium 104 4530631 YP_884073.1 CDS MAV_4952 NC_008595.1 5093074 5094483 R identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; acyltransferase, ws/dgat/mgat subfamily protein complement(5093074..5094483) Mycobacterium avium 104 4530059 YP_884074.1 CDS MAV_4953 NC_008595.1 5094528 5095724 R identified by match to protein family HMM PF07859; alpha/beta hydrolase complement(5094528..5095724) Mycobacterium avium 104 4526685 YP_884075.1 CDS MAV_4954 NC_008595.1 5095974 5096897 D identified by match to protein family HMM PF07859; alpha/beta hydrolase 5095974..5096897 Mycobacterium avium 104 4528254 YP_884076.1 CDS MAV_4955 NC_008595.1 5096900 5098213 R identified by match to protein family HMM PF07969; amidohydrolase complement(5096900..5098213) Mycobacterium avium 104 4525841 YP_884077.1 CDS MAV_4956 NC_008595.1 5098207 5099397 R hypothetical protein complement(5098207..5099397) Mycobacterium avium 104 4528668 YP_884078.1 CDS MAV_4957 NC_008595.1 5099514 5100536 R p40 protein complement(5099514..5100536) Mycobacterium avium 104 4527790 YP_884079.1 CDS MAV_4958 NC_008595.1 5100670 5101818 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 5100670..5101818 Mycobacterium avium 104 4527618 YP_884080.1 CDS MAV_4959 NC_008595.1 5101896 5102384 D hypothetical protein 5101896..5102384 Mycobacterium avium 104 4528440 YP_884081.1 CDS MAV_4960 NC_008595.1 5102480 5103442 R identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase complement(5102480..5103442) Mycobacterium avium 104 4526665 YP_884082.1 CDS MAV_4961 NC_008595.1 5103446 5104963 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(5103446..5104963) Mycobacterium avium 104 4526655 YP_884083.1 CDS MAV_4962 NC_008595.1 5105131 5106216 D identified by match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254; sensor histidine kinase 5105131..5106216 Mycobacterium avium 104 4530023 YP_884084.1 CDS MAV_4963 NC_008595.1 5106233 5108062 R catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase complement(5106233..5108062) Mycobacterium avium 104 4528598 YP_884085.1 CDS MAV_4964 NC_008595.1 5108219 5109754 R hypothetical protein complement(5108219..5109754) Mycobacterium avium 104 4525621 YP_884086.1 CDS MAV_4965 NC_008595.1 5109751 5110857 R hypothetical protein complement(5109751..5110857) Mycobacterium avium 104 4525625 YP_884087.1 CDS trmB NC_008595.1 5111051 5111830 D tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 5111051..5111830 Mycobacterium avium 104 4525552 YP_884088.1 CDS MAV_4967 NC_008595.1 5111863 5112576 D hypothetical protein 5111863..5112576 Mycobacterium avium 104 4530352 YP_884089.1 CDS MAV_4968 NC_008595.1 5112659 5115508 D MmpL3 protein 5112659..5115508 Mycobacterium avium 104 4527469 YP_884090.1 CDS MAV_4969 NC_008595.1 5115524 5116672 R identified by match to protein family HMM PF01594; hypothetical protein complement(5115524..5116672) Mycobacterium avium 104 4530268 YP_884091.1 CDS MAV_4970 NC_008595.1 5116841 5118022 D identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374; hypothetical protein 5116841..5118022 Mycobacterium avium 104 4529761 YP_884092.1 CDS MAV_4971 NC_008595.1 5118108 5118653 R hypothetical protein complement(5118108..5118653) Mycobacterium avium 104 4530626 YP_884093.1 CDS MAV_4972 NC_008595.1 5118664 5118789 R hypothetical protein complement(5118664..5118789) Mycobacterium avium 104 4526062 YP_884094.1 CDS MAV_4973 NC_008595.1 5119003 5122026 D MmpL11 protein 5119003..5122026 Mycobacterium avium 104 4530100 YP_884095.1 CDS MAV_4974 NC_008595.1 5122023 5122562 D hypothetical protein 5122023..5122562 Mycobacterium avium 104 4527654 YP_884096.1 CDS MAV_4975 NC_008595.1 5122578 5123261 R transmembrane protein complement(5122578..5123261) Mycobacterium avium 104 4528853 YP_884097.1 CDS MAV_4976 NC_008595.1 5123270 5123899 R hypothetical protein complement(5123270..5123899) Mycobacterium avium 104 4529251 YP_884098.1 CDS MAV_4977 NC_008595.1 5123941 5125929 D identified by match to protein family HMM PF01431; match to protein family HMM PF05649; peptidase M13 5123941..5125929 Mycobacterium avium 104 4525792 YP_884099.1 CDS MAV_4978 NC_008595.1 5125963 5126478 R identified by match to protein family HMM PF00210; starvation-inducible DNA-binding protein or fine tangled pili major subunit complement(5125963..5126478) Mycobacterium avium 104 4529737 YP_884100.1 CDS MAV_4979 NC_008595.1 5126626 5127549 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(5126626..5127549) Mycobacterium avium 104 4529486 YP_884101.1 CDS MAV_4980 NC_008595.1 5127683 5128990 R identified by match to protein family HMM PF00732; match to protein family HMM PF05199; choline dehydrogenase complement(5127683..5128990) Mycobacterium avium 104 4528351 YP_884102.1 CDS MAV_4981 NC_008595.1 5129487 5130461 R identified by match to protein family HMM PF00165; match to protein family HMM PF01965; AraC family transcriptional regulator complement(5129487..5130461) Mycobacterium avium 104 4528630 YP_884103.1 CDS MAV_4982 NC_008595.1 5130584 5131450 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase/reductase SDR 5130584..5131450 Mycobacterium avium 104 4525976 YP_884104.1 CDS MAV_4984 NC_008595.1 5131489 5132301 D identified by match to protein family HMM PF00561; alpha/beta hydrolase-1 5131489..5132301 Mycobacterium avium 104 4528480 YP_884105.1 CDS MAV_4983 NC_008595.1 5132291 5134528 R identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; molybdopterin oxidoreductase Fe4S4 subunit complement(5132291..5134528) Mycobacterium avium 104 4528835 YP_884106.1 CDS MAV_4985 NC_008595.1 5134518 5135123 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(5134518..5135123) Mycobacterium avium 104 4526067 YP_884107.1 CDS MAV_4986 NC_008595.1 5135233 5136252 R identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein complement(5135233..5136252) Mycobacterium avium 104 4528293 YP_884108.1 CDS MAV_4987 NC_008595.1 5136371 5137606 R identified by match to protein family HMM PF07690; sugar transporter family protein complement(5136371..5137606) Mycobacterium avium 104 4527159 YP_884109.1 CDS MAV_4988 NC_008595.1 5137729 5138019 R identified by match to protein family HMM PF02583; hypothetical protein complement(5137729..5138019) Mycobacterium avium 104 4530163 YP_884110.1 CDS ilvD NC_008595.1 5138142 5139869 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 5138142..5139869 Mycobacterium avium 104 4529905 YP_884111.1 CDS MAV_4991 NC_008595.1 5140677 5141660 D identified by similarity to GB:AAF98273.1; match to protein family HMM PF03060; oxidoreductase, 2-nitropropane dioxygenase 5140677..5141660 Mycobacterium avium 104 4529444 YP_884112.1 CDS MAV_4992 NC_008595.1 5141664 5142317 R identified by match to protein family HMM PF01596; O-methyltransferase complement(5141664..5142317) Mycobacterium avium 104 4527280 YP_884113.1 CDS MAV_4993 NC_008595.1 5142450 5142605 D hypothetical protein 5142450..5142605 Mycobacterium avium 104 4527094 YP_884114.1 CDS MAV_4994 NC_008595.1 5142636 5144753 R identified by match to protein family HMM PF00933; match to protein family HMM PF01915; glycosyl hydrolase 3 complement(5142636..5144753) Mycobacterium avium 104 4528029 YP_884115.1 CDS MAV_4995 NC_008595.1 5144750 5145262 R hypothetical protein complement(5144750..5145262) Mycobacterium avium 104 4526209 YP_884116.1 CDS MAV_4996 NC_008595.1 5145259 5146008 R hypothetical protein complement(5145259..5146008) Mycobacterium avium 104 4529458 YP_884117.1 CDS MAV_4997 NC_008595.1 5146187 5147020 R identified by match to protein family HMM PF00561; lysophospholipase complement(5146187..5147020) Mycobacterium avium 104 4528758 YP_884118.1 CDS MAV_4998 NC_008595.1 5147137 5148120 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 5147137..5148120 Mycobacterium avium 104 4530738 YP_884119.1 CDS MAV_5000 NC_008595.1 5148117 5149520 D hypothetical protein 5148117..5149520 Mycobacterium avium 104 4527886 YP_884120.1 CDS dapB NC_008595.1 5149517 5150650 R identified by match to protein family HMM PF01113; dihydrodipicolinate reductase N-terminus domain-containing protein complement(5149517..5150650) Mycobacterium avium 104 4530365 YP_884121.1 CDS MAV_5001 NC_008595.1 5150713 5151603 D hypothetical protein 5150713..5151603 Mycobacterium avium 104 4527819 YP_884122.1 CDS MAV_5002 NC_008595.1 5151629 5152354 D identified by match to protein family HMM PF02678; YhhW protein 5151629..5152354 Mycobacterium avium 104 4530017 YP_884123.1 CDS MAV_5003 NC_008595.1 5152413 5153837 D identified by match to protein family HMM PF01061; ABC transporter 5152413..5153837 Mycobacterium avium 104 4526763 YP_884124.1 CDS MAV_5005 NC_008595.1 5153944 5155026 D LprO protein 5153944..5155026 Mycobacterium avium 104 4528081 YP_884125.1 CDS MAV_5004 NC_008595.1 5155019 5155684 R identified by match to protein family HMM PF06912; hypothetical protein complement(5155019..5155684) Mycobacterium avium 104 4525752 YP_884126.1 CDS MAV_5006 NC_008595.1 5155749 5156504 R hypothetical protein complement(5155749..5156504) Mycobacterium avium 104 4527944 YP_884127.1 CDS MAV_5007 NC_008595.1 5156471 5157025 R hypothetical protein complement(5156471..5157025) Mycobacterium avium 104 4527442 YP_884128.1 CDS MAV_5008 NC_008595.1 5157022 5157993 R identified by match to protein family HMM PF06271; RDD family protein complement(5157022..5157993) Mycobacterium avium 104 4526838 YP_884129.1 CDS MAV_5009 NC_008595.1 5157990 5158691 R hypothetical protein complement(5157990..5158691) Mycobacterium avium 104 4527404 YP_884130.1 CDS MAV_5010 NC_008595.1 5158661 5159602 R mce-family protein mce1f complement(5158661..5159602) Mycobacterium avium 104 4528292 YP_884131.1 CDS MAV_5011 NC_008595.1 5159574 5161364 R identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce complement(5159574..5161364) Mycobacterium avium 104 4530381 YP_884132.1 CDS MAV_5012 NC_008595.1 5161436 5163049 R identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; mce-family protein mce1d complement(5161436..5163049) Mycobacterium avium 104 4527617 YP_884133.1 CDS MAV_5013 NC_008595.1 5163046 5164611 R identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; mce-family protein mce1c complement(5163046..5164611) Mycobacterium avium 104 4526506 YP_884134.1 CDS MAV_5014 NC_008595.1 5164608 5165648 R identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce complement(5164608..5165648) Mycobacterium avium 104 4529873 YP_884135.1 CDS MAV_5015 NC_008595.1 5165645 5166949 R identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce complement(5165645..5166949) Mycobacterium avium 104 4526124 YP_884136.1 CDS MAV_5016 NC_008595.1 5166955 5167824 R identified by match to protein family HMM PF02405; hypothetical protein complement(5166955..5167824) Mycobacterium avium 104 4526057 YP_884137.1 CDS MAV_5017 NC_008595.1 5167826 5168602 R identified by match to protein family HMM PF02405; hypothetical protein complement(5167826..5168602) Mycobacterium avium 104 4527649 YP_884138.1 CDS MAV_5018 NC_008595.1 5168941 5170536 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(5168941..5170536) Mycobacterium avium 104 4530091 YP_884139.1 CDS MAV_5020 NC_008595.1 5170711 5171400 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 5170711..5171400 Mycobacterium avium 104 4528893 YP_884140.1 CDS MAV_5019 NC_008595.1 5171397 5171837 R similar to streptomyces cyclase/dehydrase; identified by match to protein family HMM PF03364; cyclase/dehydrase complement(5171397..5171837) Mycobacterium avium 104 4530174 YP_884141.1 CDS MAV_5021 NC_008595.1 5171881 5172327 R identified by match to protein family HMM PF03061; thioesterase complement(5171881..5172327) Mycobacterium avium 104 4527626 YP_884142.1 CDS MAV_5022 NC_008595.1 5172402 5173493 D identified by match to protein family HMM PF00107; zinc-binding dehydrogenase 5172402..5173493 Mycobacterium avium 104 4526738 YP_884143.1 CDS MAV_5023 NC_008595.1 5173587 5173835 D hypothetical protein 5173587..5173835 Mycobacterium avium 104 4528207 YP_884144.1 CDS MAV_5024 NC_008595.1 5174437 5176800 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04313; match to protein family HMM PF04851; type I restriction-modification system, R subunit 5174437..5176800 Mycobacterium avium 104 4528541 YP_884145.1 CDS MAV_5025 NC_008595.1 5176872 5177468 D hypothetical protein 5176872..5177468 Mycobacterium avium 104 4528857 YP_884146.1 CDS MAV_5026 NC_008595.1 5177519 5178331 D hypothetical protein 5177519..5178331 Mycobacterium avium 104 4527674 YP_884147.1 CDS MAV_5027 NC_008595.1 5178332 5179819 D identified by match to protein family HMM PF02384; type I restriction-modification system, M subunit 5178332..5179819 Mycobacterium avium 104 4529361 YP_884148.1 CDS MAV_5028 NC_008595.1 5180992 5181192 R DNA repair protein RadC complement(5180992..5181192) Mycobacterium avium 104 4530751 YP_884149.1 CDS MAV_5030 NC_008595.1 5181281 5182555 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 5181281..5182555 Mycobacterium avium 104 4527259 YP_884150.1 CDS MAV_5031 NC_008595.1 5182559 5182756 R hypothetical protein complement(5182559..5182756) Mycobacterium avium 104 4525683 YP_884151.1 CDS MAV_5032 NC_008595.1 5182819 5183520 R identified by match to protein family HMM PF00392; match to protein family HMM PF07702; GntR-family protein transcriptional regulator complement(5182819..5183520) Mycobacterium avium 104 4528071 YP_884152.1 CDS MAV_5033 NC_008595.1 5183744 5184622 R identified by match to protein family HMM PF03781; sulfatase-modifying factor 1 complement(5183744..5184622) Mycobacterium avium 104 4528936 YP_884153.1 CDS MAV_5034 NC_008595.1 5184637 5185281 R identified by match to protein family HMM PF02371; transposase complement(5184637..5185281) Mycobacterium avium 104 4530771 YP_884154.1 CDS MAV_5035 NC_008595.1 5185455 5185799 D identified by match to protein family HMM PF01527; ISAfe7, transposase OrfA 5185455..5185799 Mycobacterium avium 104 4526237 YP_884155.1 CDS MAV_5037 NC_008595.1 5185877 5186716 D identified by match to protein family HMM PF00665; transposase 5185877..5186716 Mycobacterium avium 104 4530082 YP_884156.1 CDS MAV_5036 NC_008595.1 5186671 5187039 R transposase complement(5186671..5187039) Mycobacterium avium 104 4529566 YP_884157.1 CDS MAV_5038 NC_008595.1 5187274 5187402 R hypothetical protein complement(5187274..5187402) Mycobacterium avium 104 4526628 YP_884158.1 CDS MAV_5039 NC_008595.1 5187670 5188944 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(5187670..5188944) Mycobacterium avium 104 4528766 YP_884159.1 CDS MAV_5040 NC_008595.1 5188993 5190039 R identified by match to protein family HMM PF00872; transposase, Mutator family protein complement(5188993..5190039) Mycobacterium avium 104 4525780 YP_884160.1 CDS MAV_5041 NC_008595.1 5190268 5190579 D hypothetical protein 5190268..5190579 Mycobacterium avium 104 4528562 YP_884161.1 CDS MAV_5042 NC_008595.1 5190665 5191315 R hypothetical protein complement(5190665..5191315) Mycobacterium avium 104 4529213 YP_884162.1 CDS MAV_5043 NC_008595.1 5191312 5191725 R hypothetical protein complement(5191312..5191725) Mycobacterium avium 104 4530786 YP_884163.1 CDS MAV_5044 NC_008595.1 5191806 5192228 R hypothetical protein complement(5191806..5192228) Mycobacterium avium 104 4525897 YP_884164.1 CDS MAV_5045 NC_008595.1 5192381 5193013 R hypothetical protein complement(5192381..5193013) Mycobacterium avium 104 4526702 YP_884165.1 CDS MAV_5046 NC_008595.1 5193070 5193756 R hypothetical protein complement(5193070..5193756) Mycobacterium avium 104 4527225 YP_884166.1 CDS MAV_5047 NC_008595.1 5193791 5194750 R identified by match to protein family HMM PF02470; Mce family protein complement(5193791..5194750) Mycobacterium avium 104 4529616 YP_884167.1 CDS MAV_5048 NC_008595.1 5194747 5195673 R identified by match to protein family HMM PF02470; Mce family protein complement(5194747..5195673) Mycobacterium avium 104 4530600 YP_884168.1 CDS MAV_5049 NC_008595.1 5195745 5196863 R identified by match to protein family HMM PF02470; Mce family protein complement(5195745..5196863) Mycobacterium avium 104 4526414 YP_884169.1 CDS MAV_5050 NC_008595.1 5196863 5197834 R identified by match to protein family HMM PF02470; Mce family protein complement(5196863..5197834) Mycobacterium avium 104 4526326 YP_884170.1 CDS MAV_5051 NC_008595.1 5197822 5198829 R identified by match to protein family HMM PF02470; Mce family protein complement(5197822..5198829) Mycobacterium avium 104 4530584 YP_884171.1 CDS MAV_5052 NC_008595.1 5198826 5199770 R hypothetical protein complement(5198826..5199770) Mycobacterium avium 104 4525977 YP_884172.1 CDS MAV_5054 NC_008595.1 5200797 5201504 R identified by match to protein family HMM PF02405; ABC transporter transmembrane protein complement(5200797..5201504) Mycobacterium avium 104 4526538 YP_884173.1 CDS MAV_5055 NC_008595.1 5202660 5203292 R identified by match to protein family HMM PF00440; match to protein family HMM PF02909; TetR family transcriptional regulator complement(5202660..5203292) Mycobacterium avium 104 4528511 YP_884174.1 CDS MAV_5056 NC_008595.1 5203177 5205054 D identified by match to protein family HMM PF00391; PEP-utilizing protein 5203177..5205054 Mycobacterium avium 104 4529560 YP_884175.1 CDS MAV_5057 NC_008595.1 5205054 5205971 D hypothetical protein 5205054..5205971 Mycobacterium avium 104 4529003 YP_884176.1 CDS MAV_5058 NC_008595.1 5206133 5206630 D hypothetical protein 5206133..5206630 Mycobacterium avium 104 4530714 YP_884177.1 CDS MAV_5059 NC_008595.1 5206627 5208141 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 5206627..5208141 Mycobacterium avium 104 4527204 YP_884178.1 CDS MAV_5060 NC_008595.1 5208209 5209363 D identified by match to protein family HMM PF01636; phosphotransferase 5208209..5209363 Mycobacterium avium 104 4525895 YP_884179.1 CDS MAV_5061 NC_008595.1 5209717 5210778 D identified by match to protein family HMM PF00296; hypothetical protein 5209717..5210778 Mycobacterium avium 104 4527860 YP_884180.1 CDS MAV_5062 NC_008595.1 5211213 5212382 D identified by match to protein family HMM PF00391; pyruvate, water dikinase 5211213..5212382 Mycobacterium avium 104 4526203 YP_884181.1 CDS MAV_5063 NC_008595.1 5212506 5213579 R hypothetical protein complement(5212506..5213579) Mycobacterium avium 104 4529716 YP_884182.1 CDS MAV_5064 NC_008595.1 5213785 5214363 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(5213785..5214363) Mycobacterium avium 104 4527278 YP_884183.1 CDS MAV_5065 NC_008595.1 5214617 5215660 D hypothetical protein 5214617..5215660 Mycobacterium avium 104 4529207 YP_884184.1 CDS MAV_5066 NC_008595.1 5215967 5216512 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(5215967..5216512) Mycobacterium avium 104 4525849 YP_884185.1 CDS MAV_5067 NC_008595.1 5216730 5216867 D hypothetical protein 5216730..5216867 Mycobacterium avium 104 4526114 YP_884186.1 CDS MAV_5068 NC_008595.1 5216899 5218062 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 5216899..5218062 Mycobacterium avium 104 4529214 YP_884187.1 CDS MAV_5069 NC_008595.1 5218130 5219281 D identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; acetyl-CoA acetyltransferase 5218130..5219281 Mycobacterium avium 104 4530722 YP_884188.1 CDS MAV_5070 NC_008595.1 5219285 5220436 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 5219285..5220436 Mycobacterium avium 104 4525679 YP_884189.1 CDS MAV_5071 NC_008595.1 5220495 5221679 R acetyl-CoA hydrolase/transferase complement(5220495..5221679) Mycobacterium avium 104 4526700 YP_884190.1 CDS MAV_5072 NC_008595.1 5221672 5223207 R identified by match to protein family HMM PF00037; match to protein family HMM PF07992; NADPH-ferredoxin reductase fpra complement(5221672..5223207) Mycobacterium avium 104 4529794 YP_884191.1 CDS MAV_5073 NC_008595.1 5223185 5223313 D hypothetical protein 5223185..5223313 Mycobacterium avium 104 4526707 YP_884192.1 CDS MAV_5074 NC_008595.1 5223385 5224206 R identified by match to protein family HMM PF03328; citrate lyase complement(5223385..5224206) Mycobacterium avium 104 4529805 YP_884193.1 CDS MAV_5075 NC_008595.1 5224319 5225131 R identified by match to protein family HMM PF01636; phosphotransferase complement(5224319..5225131) Mycobacterium avium 104 4530435 YP_884194.1 CDS MAV_5076 NC_008595.1 5225547 5227286 R identified by match to protein family HMM PF00501; acyl-CoA ligase complement(5225547..5227286) Mycobacterium avium 104 4529243 YP_884195.1 CDS MAV_5077 NC_008595.1 5227283 5228896 R identified by match to protein family HMM PF00501; long chain fatty acid-CoA ligase complement(5227283..5228896) Mycobacterium avium 104 4526772 YP_884196.1 CDS MAV_5078 NC_008595.1 5228937 5229797 R identified by match to protein family HMM PF00106; peroxisomal hydratase-dehydrogenase-epimerase complement(5228937..5229797) Mycobacterium avium 104 4530578 YP_884197.1 CDS MAV_5079 NC_008595.1 5229908 5231110 R identified by match to protein family HMM PF00108; acetyl-CoA acetyltransferase complement(5229908..5231110) Mycobacterium avium 104 4528800 YP_884198.1 CDS MAV_5080 NC_008595.1 5231100 5232455 R identified by match to protein family HMM PF01796; hypothetical protein complement(5231100..5232455) Mycobacterium avium 104 4526547 YP_884199.1 CDS MAV_5081 NC_008595.1 5232452 5233660 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(5232452..5233660) Mycobacterium avium 104 4525824 YP_884200.1 CDS MAV_5082 NC_008595.1 5233657 5233914 R hypothetical protein complement(5233657..5233914) Mycobacterium avium 104 4527718 YP_884201.1 CDS MAV_5083 NC_008595.1 5233926 5234462 R identified by match to protein family HMM PF00866; beta subunit of hydroxylase component of benzoate 1,2-dioxygenase complement(5233926..5234462) Mycobacterium avium 104 4529392 YP_884202.1 CDS MAV_5084 NC_008595.1 5234467 5235735 R identified by match to protein family HMM PF00355; match to protein family HMM PF00848; dioxygenase large subunit complement(5234467..5235735) Mycobacterium avium 104 4525938 YP_884203.1 CDS MAV_5085 NC_008595.1 5235732 5236520 R identified by match to protein family HMM PF00378; enoyl-CoA hydratase complement(5235732..5236520) Mycobacterium avium 104 4526351 YP_884204.1 CDS MAV_5086 NC_008595.1 5236517 5237320 R identified by match to protein family HMM PF00378; enoyl-CoA hydratase complement(5236517..5237320) Mycobacterium avium 104 4526829 YP_884205.1 CDS MAV_5087 NC_008595.1 5237317 5238087 R identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase complement(5237317..5238087) Mycobacterium avium 104 4527167 YP_884206.1 CDS fabG NC_008595.1 5238084 5238833 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase complement(5238084..5238833) Mycobacterium avium 104 4525617 YP_884207.1 CDS MAV_5089 NC_008595.1 5238948 5239745 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF07993; oxidoreductase, short chain dehydrogenase/reductase 5238948..5239745 Mycobacterium avium 104 4528421 YP_884208.1 CDS MAV_5090 NC_008595.1 5239881 5241590 D identified by match to protein family HMM PF01266; dehydrogenase 5239881..5241590 Mycobacterium avium 104 4528995 YP_884209.1 CDS MAV_5091 NC_008595.1 5241967 5242413 D TetR family protein transcriptional regulator, putative 5241967..5242413 Mycobacterium avium 104 4529681 YP_884210.1 CDS MAV_5092 NC_008595.1 5242710 5242985 D transposase 5242710..5242985 Mycobacterium avium 104 4526277 YP_884211.1 CDS MAV_5093 NC_008595.1 5242985 5243902 D identified by match to protein family HMM PF00665; transposase 5242985..5243902 Mycobacterium avium 104 4528235 YP_884212.1 CDS MAV_5094 NC_008595.1 5244388 5244513 R hypothetical protein complement(5244388..5244513) Mycobacterium avium 104 4525550 YP_884213.1 CDS MAV_5095 NC_008595.1 5244579 5245964 R identified by match to protein family HMM PF00171; fatty aldehyde dehydrogenase complement(5244579..5245964) Mycobacterium avium 104 4527793 YP_884214.1 CDS MAV_5096 NC_008595.1 5245983 5246774 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; 3-alpha-hydroxysteroid dehydrogenase complement(5245983..5246774) Mycobacterium avium 104 4529004 YP_884215.1 CDS MAV_5097 NC_008595.1 5246782 5248047 R NikQ protein complement(5246782..5248047) Mycobacterium avium 104 4529695 YP_884216.1 CDS MAV_5098 NC_008595.1 5248044 5249507 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(5248044..5249507) Mycobacterium avium 104 4527662 YP_884217.1 CDS MAV_5099 NC_008595.1 5249586 5249990 R hypothetical protein complement(5249586..5249990) Mycobacterium avium 104 4530755 YP_884218.1 CDS MAV_5100 NC_008595.1 5250166 5251242 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(5250166..5251242) Mycobacterium avium 104 4527185 YP_884219.1 CDS MAV_5101 NC_008595.1 5251486 5252076 D transcriptional regulator 5251486..5252076 Mycobacterium avium 104 4526111 YP_884220.1 CDS MAV_5102 NC_008595.1 5252138 5253142 D p40 protein 5252138..5253142 Mycobacterium avium 104 4530162 YP_884221.1 CDS MAV_5104 NC_008595.1 5253384 5254658 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 5253384..5254658 Mycobacterium avium 104 4526566 YP_884222.1 CDS MAV_5103 NC_008595.1 5254648 5254995 R identified by match to protein family HMM PF00027; Crp/Fnr family transcriptional regulator protein complement(5254648..5254995) Mycobacterium avium 104 4529540 YP_884223.1 CDS MAV_5105 NC_008595.1 5255333 5257597 R identified by match to protein family HMM PF03971; match to protein family HMM TIGR00178; isocitrate dehydrogenase, NADP-dependent complement(5255333..5257597) Mycobacterium avium 104 4526112 YP_884224.1 CDS MAV_5106 NC_008595.1 5257692 5259551 R catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase complement(5257692..5259551) Mycobacterium avium 104 4526832 YP_884225.1 CDS MAV_5107 NC_008595.1 5259548 5260174 R hypothetical protein complement(5259548..5260174) Mycobacterium avium 104 4529302 YP_884226.1 CDS MAV_5108 NC_008595.1 5260602 5260958 R identified by match to protein family HMM PF01022; ArsR family transcriptional regulator complement(5260602..5260958) Mycobacterium avium 104 4528725 YP_884227.1 CDS MAV_5109 NC_008595.1 5261050 5262528 R identified by match to protein family HMM PF00329; hydrogenase-4, G subunit, putative complement(5261050..5262528) Mycobacterium avium 104 4527571 YP_884228.1 CDS MAV_5110 NC_008595.1 5262525 5263994 R identified by match to protein family HMM PF00361; hydrogenase-4, F subunit, putative complement(5262525..5263994) Mycobacterium avium 104 4527667 YP_884229.1 CDS MAV_5111 NC_008595.1 5263994 5264656 R hydrogenase 4 membrane component complement(5263994..5264656) Mycobacterium avium 104 4527573 YP_884230.1 CDS MAV_5112 NC_008595.1 5264669 5265628 R identified by match to protein family HMM PF00146; hydrogenase-4, C subunit, putative complement(5264669..5265628) Mycobacterium avium 104 4527869 YP_884231.1 CDS MAV_5113 NC_008595.1 5265625 5267487 R identified by match to protein family HMM PF00361; NADH dehydrogenase subunit n complement(5265625..5267487) Mycobacterium avium 104 4530789 YP_884232.1 CDS MAV_5114 NC_008595.1 5267598 5268005 R identified by match to protein family HMM PF01058; hydrogenase-4, I subunit, putative complement(5267598..5268005) Mycobacterium avium 104 4527220 YP_884233.1 CDS MAV_5116 NC_008595.1 5268913 5270187 D identified by match to protein family HMM PF00872; transposase, Mutator family protein 5268913..5270187 Mycobacterium avium 104 4527884 YP_884234.1 CDS MAV_5117 NC_008595.1 5270191 5270742 R DNA repair protein RadC complement(5270191..5270742) Mycobacterium avium 104 4526328 YP_884235.1 CDS MAV_5118 NC_008595.1 5270784 5271710 R identified by match to protein family HMM PF07859; alpha/beta hydrolase complement(5270784..5271710) Mycobacterium avium 104 4530378 YP_884236.1 CDS MAV_5119 NC_008595.1 5271707 5273221 R identified by match to protein family HMM PF01266; lipolytic enzyme complement(5271707..5273221) Mycobacterium avium 104 4527826 YP_884237.1 CDS MAV_5120 NC_008595.1 5273203 5273949 R identified by match to protein family HMM PF00106; oxidoreductase complement(5273203..5273949) Mycobacterium avium 104 4526968 YP_884238.1 CDS MAV_5121 NC_008595.1 5273946 5274698 R identified by match to protein family HMM PF03328; HpcH/HpaI aldolase/citrate lyase complement(5273946..5274698) Mycobacterium avium 104 4526845 YP_884239.1 CDS MAV_5122 NC_008595.1 5274709 5275674 R identified by match to protein family HMM PF00107; zinc-binding dehydrogenase complement(5274709..5275674) Mycobacterium avium 104 4526131 YP_884240.1 CDS MAV_5123 NC_008595.1 5275676 5276887 R identified by match to protein family HMM PF00067; cytochrome P450 complement(5275676..5276887) Mycobacterium avium 104 4529226 YP_884241.1 CDS MAV_5124 NC_008595.1 5276905 5277609 R hypothetical protein complement(5276905..5277609) Mycobacterium avium 104 4527602 YP_884242.1 CDS MAV_5125 NC_008595.1 5277613 5278176 R hypothetical protein complement(5277613..5278176) Mycobacterium avium 104 4526496 YP_884243.1 CDS MAV_5126 NC_008595.1 5278336 5279514 R identified by match to protein family HMM PF02515; caib/baif family protein complement(5278336..5279514) Mycobacterium avium 104 4527108 YP_884244.1 CDS MAV_5128 NC_008595.1 5279627 5280313 D identified by match to protein family HMM PF04248; hypothetical protein 5279627..5280313 Mycobacterium avium 104 4527353 YP_884245.1 CDS MAV_5127 NC_008595.1 5280297 5281472 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase middle domain-containing protein complement(5280297..5281472) Mycobacterium avium 104 4529055 YP_884246.1 CDS MAV_5129 NC_008595.1 5281481 5282401 R identified by match to protein family HMM PF00296; hypothetical protein complement(5281481..5282401) Mycobacterium avium 104 4527684 YP_884247.1 CDS MAV_5130 NC_008595.1 5282407 5283300 R hypothetical protein complement(5282407..5283300) Mycobacterium avium 104 4527267 YP_884248.1 CDS MAV_5131 NC_008595.1 5283435 5283908 D hypothetical protein 5283435..5283908 Mycobacterium avium 104 4530561 YP_884249.1 CDS MAV_5132 NC_008595.1 5283981 5284799 D identified by match to protein family HMM PF03758; senescence marker protein-30 (SMP-30) 5283981..5284799 Mycobacterium avium 104 4526909 YP_884250.1 CDS MAV_5133 NC_008595.1 5284819 5285637 D hypothetical protein 5284819..5285637 Mycobacterium avium 104 4530737 YP_884251.1 CDS MAV_5134 NC_008595.1 5285690 5286241 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5285690..5286241 Mycobacterium avium 104 4525575 YP_884252.1 CDS MAV_5135 NC_008595.1 5286255 5287595 R identified by match to protein family HMM PF01565; match to protein family HMM PF02913; FAD linked oxidase complement(5286255..5287595) Mycobacterium avium 104 4527832 YP_884253.1 CDS MAV_5136 NC_008595.1 5287617 5288357 R identified by match to protein family HMM PF00106; 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase complement(5287617..5288357) Mycobacterium avium 104 4530202 YP_884254.1 CDS MAV_5137 NC_008595.1 5288375 5289475 R identified by match to protein family HMM PF01113; match to protein family HMM PF03447; homoserine dehydrogenase complement(5288375..5289475) Mycobacterium avium 104 4527582 YP_884255.1 CDS MAV_5138 NC_008595.1 5289593 5290228 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(5289593..5290228) Mycobacterium avium 104 4528546 YP_884256.1 CDS MAV_5139 NC_008595.1 5290387 5290512 D hypothetical protein 5290387..5290512 Mycobacterium avium 104 4528015 YP_884257.1 CDS MAV_5140 NC_008595.1 5290533 5291957 R identified by match to protein family HMM PF02233; NAD(P) transhydrogenase beta subunit complement(5290533..5291957) Mycobacterium avium 104 4530469 YP_884258.1 CDS MAV_5141 NC_008595.1 5291954 5292271 R PntAB protein complement(5291954..5292271) Mycobacterium avium 104 4530511 YP_884259.1 CDS MAV_5142 NC_008595.1 5292272 5293369 R identified by match to protein family HMM PF01262; match to protein family HMM PF05222; alanine dehydrogenase/pyridine nucleotide transhydrogenase complement(5292272..5293369) Mycobacterium avium 104 4530637 YP_884260.1 CDS MAV_5143 NC_008595.1 5293511 5293972 R identified by match to protein family HMM PF07080; response regulator receiver domain-containing protein complement(5293511..5293972) Mycobacterium avium 104 4530702 YP_884261.1 CDS MAV_5144 NC_008595.1 5294080 5295312 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 5294080..5295312 Mycobacterium avium 104 4525936 YP_884262.1 CDS MAV_5145 NC_008595.1 5295305 5296135 D phosphotyrosine protein phosphatase ptpb 5295305..5296135 Mycobacterium avium 104 4526323 YP_884263.1 CDS MAV_5146 NC_008595.1 5296155 5297009 R identified by match to protein family HMM PF00106; peroxisomal multifunctional enzyme type 2 complement(5296155..5297009) Mycobacterium avium 104 4526841 YP_884264.1 CDS MAV_5147 NC_008595.1 5297077 5298498 R identified by match to protein family HMM PF00171; fatty aldehyde dehydrogenase complement(5297077..5298498) Mycobacterium avium 104 4528398 YP_884265.1 CDS MAV_5148 NC_008595.1 5298619 5300169 R identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; cell envelope-related function transcriptional attenuator complement(5298619..5300169) Mycobacterium avium 104 4529671 YP_884266.1 CDS MAV_5149 NC_008595.1 5300244 5301185 R identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein complement(5300244..5301185) Mycobacterium avium 104 4527942 YP_884267.1 CDS MAV_5150 NC_008595.1 5301217 5302158 R identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, putative, family protein complement(5301217..5302158) Mycobacterium avium 104 4525581 YP_884268.1 CDS MAV_5151 NC_008595.1 5302235 5302870 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(5302235..5302870) Mycobacterium avium 104 4526445 YP_884269.1 CDS MAV_5152 NC_008595.1 5302873 5303859 R identified by match to protein family HMM PF02678; match to protein family HMM PF05726; chromosome condensation protein complement(5302873..5303859) Mycobacterium avium 104 4529821 YP_884270.1 CDS MAV_5153 NC_008595.1 5303985 5304533 R identified by match to protein family HMM PF00210; starvation-induced DNA protecting protein complement(5303985..5304533) Mycobacterium avium 104 4530415 YP_884271.1 CDS MAV_5154 NC_008595.1 5304622 5305536 R hypothetical protein complement(5304622..5305536) Mycobacterium avium 104 4526494 YP_884272.1 CDS MAV_5155 NC_008595.1 5305597 5305998 D hypothetical protein 5305597..5305998 Mycobacterium avium 104 4529847 YP_884273.1 CDS MAV_5156 NC_008595.1 5306001 5306381 R identified by match to protein family HMM PF04248; hypothetical protein complement(5306001..5306381) Mycobacterium avium 104 4525933 YP_884274.1 CDS MAV_5157 NC_008595.1 5306604 5307623 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; 3-beta hydroxysteroid dehydrogenase/isomerase complement(5306604..5307623) Mycobacterium avium 104 4528922 YP_884275.1 CDS MAV_5158 NC_008595.1 5307620 5308126 R hypothetical protein complement(5307620..5308126) Mycobacterium avium 104 4526886 YP_884276.2 CDS msrA NC_008595.1 5308255 5308770 D this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 5308255..5308770 Mycobacterium avium 104 4529639 YP_884277.1 CDS MAV_5160 NC_008595.1 5308783 5310099 R identified by match to protein family HMM PF00067; cytochrome P450 monooxygenase complement(5308783..5310099) Mycobacterium avium 104 4528191 YP_884278.1 CDS MAV_5161 NC_008595.1 5310239 5310844 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5310239..5310844 Mycobacterium avium 104 4526297 YP_884279.1 CDS MAV_5162 NC_008595.1 5310951 5311163 D identified by match to protein family HMM PF03459; match to protein family HMM TIGR00638; molybdenum-binding protein 5310951..5311163 Mycobacterium avium 104 4529975 YP_884280.1 CDS MAV_5163 NC_008595.1 5311241 5312131 R identified by match to protein family HMM PF00561; alpha/beta hydrolase complement(5311241..5312131) Mycobacterium avium 104 4526719 YP_884281.1 CDS MAV_5164 NC_008595.1 5312161 5313390 R hypothetical protein complement(5312161..5313390) Mycobacterium avium 104 4527964 YP_884282.1 CDS MAV_5165 NC_008595.1 5313425 5313994 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5313425..5313994 Mycobacterium avium 104 4530019 YP_884283.1 CDS MAV_5166 NC_008595.1 5313991 5315103 D hypothetical protein 5313991..5315103 Mycobacterium avium 104 4527595 YP_884284.1 CDS MAV_5167 NC_008595.1 5315185 5316285 R identified by match to protein family HMM PF00487; Fatty acid desaturase complement(5315185..5316285) Mycobacterium avium 104 4528405 YP_884285.1 CDS MAV_5168 NC_008595.1 5316298 5317392 R identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF08021; oxidoreductase FAD-binding subunit complement(5316298..5317392) Mycobacterium avium 104 4529898 YP_884286.1 CDS MAV_5169 NC_008595.1 5317490 5318137 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5317490..5318137 Mycobacterium avium 104 4526485 YP_884287.1 CDS MAV_5170 NC_008595.1 5318173 5318496 R hypothetical protein complement(5318173..5318496) Mycobacterium avium 104 4527811 YP_884288.1 CDS MAV_5171 NC_008595.1 5318592 5319197 R identified by match to protein family HMM PF00583; acetyltransferase, gnat family protein complement(5318592..5319197) Mycobacterium avium 104 4526177 YP_884289.1 CDS MAV_5172 NC_008595.1 5319261 5321129 D identified by match to protein family HMM PF00296; match to protein family HMM PF01590; match to protein family HMM PF03861; F420-dependent glucose-6-phosphate dehydrogenase 5319261..5321129 Mycobacterium avium 104 4526238 YP_884290.1 CDS MAV_5173 NC_008595.1 5321223 5322518 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 5321223..5322518 Mycobacterium avium 104 4530372 YP_884291.1 CDS MAV_5174 NC_008595.1 5322593 5323048 R identified by match to protein family HMM PF01575; ZbpA protein complement(5322593..5323048) Mycobacterium avium 104 4528197 YP_884292.1 CDS MAV_5175 NC_008595.1 5323164 5324000 D identified by match to protein family HMM PF00561; non-haem bromoperoxidase BPO-A2 5323164..5324000 Mycobacterium avium 104 4525775 YP_884293.1 CDS MAV_5176 NC_008595.1 5324082 5324255 D hypothetical protein 5324082..5324255 Mycobacterium avium 104 4525790 YP_884294.1 CDS MAV_5177 NC_008595.1 5324256 5324657 R identified by match to protein family HMM PF03625; hypothetical protein complement(5324256..5324657) Mycobacterium avium 104 4528757 YP_884295.1 CDS MAV_5178 NC_008595.1 5324704 5325006 R identified by match to protein family HMM PF02583; hypothetical protein complement(5324704..5325006) Mycobacterium avium 104 4526424 YP_884296.1 CDS MAV_5179 NC_008595.1 5325056 5325583 D identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040; hypothetical protein 5325056..5325583 Mycobacterium avium 104 4527714 YP_884297.1 CDS MAV_5180 NC_008595.1 5325690 5326103 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 5325690..5326103 Mycobacterium avium 104 4527239 YP_884298.1 CDS MAV_5181 NC_008595.1 5326100 5326942 D identified by match to protein family HMM PF00005; daunorubicin ABC transporter ATPase 5326100..5326942 Mycobacterium avium 104 4526721 YP_884299.1 CDS MAV_5182 NC_008595.1 5326932 5327750 D identified by match to protein family HMM PF01061; drug ABC transporter membrane protein 5326932..5327750 Mycobacterium avium 104 4530743 YP_884300.1 CDS MAV_5183 NC_008595.1 5327985 5329052 D identified by match to protein family HMM PF00756; antigen 85-C 5327985..5329052 Mycobacterium avium 104 4526101 YP_884301.1 CDS MAV_5184 NC_008595.1 5329108 5329794 R identified by match to protein family HMM PF06912; hypothetical protein complement(5329108..5329794) Mycobacterium avium 104 4530428 YP_884302.1 CDS MAV_5185 NC_008595.1 5329840 5331198 R trehalose synthase-fused maltokinase complement(5329840..5331198) Mycobacterium avium 104 4527086 YP_884303.1 CDS treS NC_008595.1 5331248 5333020 R identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; trehalose synthase complement(5331248..5333020) Mycobacterium avium 104 4529238 YP_884304.1 CDS MAV_5187 NC_008595.1 5333142 5334257 R identified by match to protein family HMM PF00089; match to protein family HMM PF00595; trypsin complement(5333142..5334257) Mycobacterium avium 104 4526740 YP_884305.1 CDS MAV_5188 NC_008595.1 5334401 5334838 D identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 5334401..5334838 Mycobacterium avium 104 4526066 YP_884306.1 CDS MAV_5189 NC_008595.1 5334984 5337146 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 5334984..5337146 Mycobacterium avium 104 4530252 YP_884307.1 CDS MAV_5190 NC_008595.1 5337165 5338823 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(5337165..5338823) Mycobacterium avium 104 4525687 YP_884308.1 CDS MAV_5191 NC_008595.1 5340715 5341647 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(5340715..5341647) Mycobacterium avium 104 4529787 YP_884309.1 CDS MAV_5193 NC_008595.1 5341705 5342457 R identified by match to protein family HMM PF00857; isochorismatase complement(5341705..5342457) Mycobacterium avium 104 4530765 YP_884310.1 CDS MAV_5194 NC_008595.1 5342534 5343262 D identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 5342534..5343262 Mycobacterium avium 104 4527154 YP_884311.1 CDS MAV_5195 NC_008595.1 5343374 5343973 R hypothetical protein complement(5343374..5343973) Mycobacterium avium 104 4526258 YP_884312.1 CDS MAV_5196 NC_008595.1 5344141 5345085 D identified by match to protein family HMM PF00107; zinc-binding dehydrogenase 5344141..5345085 Mycobacterium avium 104 4525629 YP_884313.1 CDS MAV_5197 NC_008595.1 5345087 5346847 R identified by match to protein family HMM PF01566; manganese/iron transporter complement(5345087..5346847) Mycobacterium avium 104 4528599 YP_884314.1 CDS MAV_5198 NC_008595.1 5346981 5347139 R hypothetical protein complement(5346981..5347139) Mycobacterium avium 104 4528306 YP_884315.1 CDS MAV_5199 NC_008595.1 5347180 5347314 D hypothetical protein 5347180..5347314 Mycobacterium avium 104 4528141 YP_884316.1 CDS MAV_5200 NC_008595.1 5347715 5348374 D identified by match to protein family HMM PF01596; O-methyltransferase, family protein 3 5347715..5348374 Mycobacterium avium 104 4526531 YP_884317.1 CDS MAV_5201 NC_008595.1 5348379 5350373 R identified by match to protein family HMM PF01757; acyltransferase complement(5348379..5350373) Mycobacterium avium 104 4526768 YP_884318.1 CDS MAV_5202 NC_008595.1 5350609 5352045 R identified by match to protein family HMM PF00171; aldehyde dehydrogenase complement(5350609..5352045) Mycobacterium avium 104 4527111 YP_884319.1 CDS MAV_5203 NC_008595.1 5352061 5353767 R identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; thiamine pyrophosphate-binding protein complement(5352061..5353767) Mycobacterium avium 104 4528278 YP_884320.1 CDS MAV_5204 NC_008595.1 5353768 5354907 R identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F complement(5353768..5354907) Mycobacterium avium 104 4528462 YP_884321.1 CDS MAV_5205 NC_008595.1 5355027 5355935 R identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase complement(5355027..5355935) Mycobacterium avium 104 4526100 YP_884322.1 CDS MAV_5206 NC_008595.1 5355974 5357833 R identified by match to protein family HMM PF01266; cyclododecanone monooxygenase complement(5355974..5357833) Mycobacterium avium 104 4530431 YP_884323.1 CDS MAV_5207 NC_008595.1 5357830 5359230 R identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein complement(5357830..5359230) Mycobacterium avium 104 4526091 YP_884324.1 CDS MAV_5208 NC_008595.1 5359230 5360045 R identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase complement(5359230..5360045) Mycobacterium avium 104 4526692 YP_884325.1 CDS MAV_5209 NC_008595.1 5360240 5360365 R hypothetical protein complement(5360240..5360365) Mycobacterium avium 104 4528403 YP_884326.1 CDS MAV_5210 NC_008595.1 5360355 5361932 D identified by match to protein family HMM PF01436; hypothetical protein 5360355..5361932 Mycobacterium avium 104 4529629 YP_884327.1 CDS MAV_5211 NC_008595.1 5361932 5362681 D identified by match to protein family HMM PF00392; match to protein family HMM PF07702; GntR family transcriptional regulator 5361932..5362681 Mycobacterium avium 104 4530617 YP_884328.1 CDS MAV_5212 NC_008595.1 5362683 5364299 D identified by match to protein family HMM PF00501; AMP-binding enzyme, putative 5362683..5364299 Mycobacterium avium 104 4528805 YP_884329.1 CDS MAV_5213 NC_008595.1 5364301 5365074 D identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 5364301..5365074 Mycobacterium avium 104 4528264 YP_884330.1 CDS MAV_5214 NC_008595.1 5365083 5366225 R identified by match to protein family HMM PF00107; alcohol dehydrogenase B complement(5365083..5366225) Mycobacterium avium 104 4526507 YP_884331.1 CDS MAV_5215 NC_008595.1 5366311 5366805 R hypothetical protein complement(5366311..5366805) Mycobacterium avium 104 4529971 YP_884332.1 CDS MAV_5216 NC_008595.1 5366892 5367263 D hypothetical protein 5366892..5367263 Mycobacterium avium 104 4528483 YP_884333.1 CDS MAV_5217 NC_008595.1 5367298 5367528 D hypothetical protein 5367298..5367528 Mycobacterium avium 104 4528761 YP_884334.1 CDS MAV_5218 NC_008595.1 5367586 5367897 R hypothetical protein complement(5367586..5367897) Mycobacterium avium 104 4528794 YP_884335.1 CDS MAV_5219 NC_008595.1 5368018 5372796 D identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; ATPase P 5368018..5372796 Mycobacterium avium 104 4525952 YP_884336.1 CDS MAV_5220 NC_008595.1 5372803 5374353 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(5372803..5374353) Mycobacterium avium 104 4528601 YP_884337.1 CDS MAV_5221 NC_008595.1 5374358 5375296 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; NAD dependent epimerase/dehydratase complement(5374358..5375296) Mycobacterium avium 104 4529268 YP_884338.1 CDS MAV_5223 NC_008595.1 5376276 5377682 R hypothetical protein complement(5376276..5377682) Mycobacterium avium 104 4530553 YP_884339.1 CDS MAV_5224 NC_008595.1 5377685 5378875 R hypothetical protein complement(5377685..5378875) Mycobacterium avium 104 4528124 YP_884340.1 CDS MAV_5225 NC_008595.1 5378903 5379667 R identified by match to protein family HMM PF00106; DltE protein complement(5378903..5379667) Mycobacterium avium 104 4529814 YP_884341.1 CDS MAV_5226 NC_008595.1 5379819 5380772 R hypothetical protein complement(5379819..5380772) Mycobacterium avium 104 4528271 YP_884342.1 CDS MAV_5227 NC_008595.1 5380884 5381477 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator, putative 5380884..5381477 Mycobacterium avium 104 4528001 YP_884343.1 CDS MAV_5228 NC_008595.1 5381519 5382904 D identified by match to protein family HMM PF00211; match to protein family HMM PF00561; hydrolase, alpha/beta hydrolase family protein 5381519..5382904 Mycobacterium avium 104 4527088 YP_884344.1 CDS MAV_5229 NC_008595.1 5383030 5383776 D identified by match to protein family HMM PF01209; methyltransferase type 11 5383030..5383776 Mycobacterium avium 104 4525652 YP_884345.1 CDS MAV_5230 NC_008595.1 5383792 5384250 R hypothetical protein complement(5383792..5384250) Mycobacterium avium 104 4527077 YP_884346.1 CDS MAV_5232 NC_008595.1 5384909 5385106 R hypothetical protein complement(5384909..5385106) Mycobacterium avium 104 4526808 YP_884347.1 CDS MAV_5233 NC_008595.1 5385193 5386038 R identified by match to protein family HMM PF01370; 3-alpha-hydroxysteroid dehydrogenase complement(5385193..5386038) Mycobacterium avium 104 4529850 YP_884348.1 CDS MAV_5234 NC_008595.1 5386043 5386807 R hypothetical protein complement(5386043..5386807) Mycobacterium avium 104 4528458 YP_884349.1 CDS MAV_5235 NC_008595.1 5386861 5387727 R transcriptional regulator complement(5386861..5387727) Mycobacterium avium 104 4525547 YP_884350.1 CDS MAV_5236 NC_008595.1 5387843 5388895 D identified by match to protein family HMM PF00107; zinc-binding dehydrogenase 5387843..5388895 Mycobacterium avium 104 4525847 YP_884351.1 CDS MAV_5237 NC_008595.1 5388892 5389308 D identified by match to protein family HMM TIGR02246; hypothetical protein 5388892..5389308 Mycobacterium avium 104 4525576 YP_884352.1 CDS MAV_5238 NC_008595.1 5389305 5390123 D identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 5389305..5390123 Mycobacterium avium 104 4528735 YP_884353.1 CDS MAV_5239 NC_008595.1 5390366 5391649 D identified by match to protein family HMM PF01699; sodium/calcium exchanger family protein 5390366..5391649 Mycobacterium avium 104 4526933 YP_884354.1 CDS MAV_5240 NC_008595.1 5391694 5392521 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase 5391694..5392521 Mycobacterium avium 104 4529051 YP_884355.1 CDS MAV_5241 NC_008595.1 5392576 5394171 R monooxygenase complement(5392576..5394171) Mycobacterium avium 104 4527435 YP_884356.1 CDS MAV_5242 NC_008595.1 5394266 5394823 D identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 5394266..5394823 Mycobacterium avium 104 4530054 YP_884357.1 CDS MAV_5243 NC_008595.1 5394824 5395294 R hypothetical protein complement(5394824..5395294) Mycobacterium avium 104 4529974 YP_884358.1 CDS MAV_5244 NC_008595.1 5395404 5396225 D identified by match to protein family HMM PF00106; cholesterol oxidase 5395404..5396225 Mycobacterium avium 104 4530784 YP_884359.1 CDS MAV_5245 NC_008595.1 5396311 5396523 D identified by match to protein family HMM PF00403; hypothetical protein 5396311..5396523 Mycobacterium avium 104 4525783 YP_884360.1 CDS MAV_5246 NC_008595.1 5396520 5398808 D identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-translocating P-type ATPase 5396520..5398808 Mycobacterium avium 104 4530567 YP_884361.1 CDS MAV_5248 NC_008595.1 5400592 5401401 D identified by match to protein family HMM PF01522; polysaccharide deacetylase 5400592..5401401 Mycobacterium avium 104 4526164 YP_884362.1 CDS MAV_5249 NC_008595.1 5401408 5401827 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(5401408..5401827) Mycobacterium avium 104 4529143 YP_884363.1 CDS MAV_5250 NC_008595.1 5401939 5402883 D LpqP protein 5401939..5402883 Mycobacterium avium 104 4528253 YP_884364.1 CDS MAV_5251 NC_008595.1 5402930 5404240 D identified by similarity to SP:O94091; match to protein family HMM PF03583; secretory lipase 5402930..5404240 Mycobacterium avium 104 4530550 YP_884365.1 CDS MAV_5252 NC_008595.1 5404317 5404877 D hypothetical protein 5404317..5404877 Mycobacterium avium 104 4527540 YP_884366.1 CDS MAV_5253 NC_008595.1 5404920 5405528 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(5404920..5405528) Mycobacterium avium 104 4529352 YP_884367.1 CDS MAV_5254 NC_008595.1 5405600 5406430 D identified by match to protein family HMM PF00561; hydrolase, alpha/beta hydrolase family protein 5405600..5406430 Mycobacterium avium 104 4529748 YP_884368.1 CDS MAV_5255 NC_008595.1 5406506 5407267 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; NAD dependent epimerase/dehydratase 5406506..5407267 Mycobacterium avium 104 4526948 YP_884369.1 CDS MAV_5257 NC_008595.1 5407354 5408994 D activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 5407354..5408994 Mycobacterium avium 104 4525710 YP_884370.1 CDS MAV_5256 NC_008595.1 5408933 5409583 R hypothetical protein complement(5408933..5409583) Mycobacterium avium 104 4526259 YP_884371.1 CDS MAV_5258 NC_008595.1 5409580 5410011 R identified by match to protein family HMM PF01796; hypothetical protein complement(5409580..5410011) Mycobacterium avium 104 4525516 YP_884372.1 CDS MAV_5259 NC_008595.1 5410008 5411174 R hypothetical protein complement(5410008..5411174) Mycobacterium avium 104 4529954 YP_884373.1 CDS MAV_5260 NC_008595.1 5411164 5411493 R hypothetical protein complement(5411164..5411493) Mycobacterium avium 104 4525858 YP_884374.1 CDS MAV_5261 NC_008595.1 5411495 5413825 R identified by match to protein family HMM PF02515; caib/baif family protein complement(5411495..5413825) Mycobacterium avium 104 4528780 YP_884375.1 CDS MAV_5262 NC_008595.1 5413828 5415201 R identified by match to protein family HMM PF04909; amidohydrolase complement(5413828..5415201) Mycobacterium avium 104 4526951 YP_884376.1 CDS MAV_5263 NC_008595.1 5415443 5416447 D identified by match to protein family HMM PF00356; LacI family transcriptional regulator 5415443..5416447 Mycobacterium avium 104 4526614 YP_884377.1 CDS MAV_5264 NC_008595.1 5416451 5416864 R identified by match to protein family HMM PF01796; acyl dehydratase complement(5416451..5416864) Mycobacterium avium 104 4525779 YP_884378.1 CDS MAV_5265 NC_008595.1 5416870 5418084 R nonspecific lipid-transfer protein complement(5416870..5418084) Mycobacterium avium 104 4530563 YP_884379.1 CDS MAV_5267 NC_008595.1 5420513 5421097 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5420513..5421097 Mycobacterium avium 104 4530117 YP_884380.1 CDS MAV_5268 NC_008595.1 5421175 5422272 D hypothetical protein 5421175..5422272 Mycobacterium avium 104 4527501 YP_884381.1 CDS MAV_5269 NC_008595.1 5422269 5423441 D hypothetical protein 5422269..5423441 Mycobacterium avium 104 4529286 YP_884382.1 CDS MAV_5270 NC_008595.1 5423458 5424525 D identified by match to protein family HMM PF02641; hypothetical protein 5423458..5424525 Mycobacterium avium 104 4526967 YP_884383.1 CDS MAV_5271 NC_008595.1 5424527 5425420 R catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; fructose-1,6-bisphosphate aldolase complement(5424527..5425420) Mycobacterium avium 104 4526854 YP_884384.1 CDS MAV_5272 NC_008595.1 5425868 5426245 D identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; anti-anti-sigma factor 5425868..5426245 Mycobacterium avium 104 4529258 YP_884385.1 CDS MAV_5273 NC_008595.1 5426302 5427387 R identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein complement(5426302..5427387) Mycobacterium avium 104 4530778 YP_884386.1 CDS MAV_5274 NC_008595.1 5427384 5428520 R hypothetical protein complement(5427384..5428520) Mycobacterium avium 104 4527451 YP_884387.1 CDS MAV_5275 NC_008595.1 5428646 5429266 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5428646..5429266 Mycobacterium avium 104 4528901 YP_884388.1 CDS MAV_5276 NC_008595.1 5429369 5430505 D identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein 5429369..5430505 Mycobacterium avium 104 4529058 YP_884389.1 CDS MAV_5277 NC_008595.1 5430652 5432418 D identified by match to protein family HMM PF01979; match to protein family HMM PF07908; match to protein family HMM PF07969; amidohydrolase 5430652..5432418 Mycobacterium avium 104 4528640 YP_884390.1 CDS MAV_5278 NC_008595.1 5432433 5433779 D identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein 5432433..5433779 Mycobacterium avium 104 4528960 YP_884391.1 CDS MAV_5279 NC_008595.1 5434000 5434224 D hypothetical protein 5434000..5434224 Mycobacterium avium 104 4530347 YP_884392.1 CDS MAV_5280 NC_008595.1 5434240 5434896 R identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545; two-component system response regulator complement(5434240..5434896) Mycobacterium avium 104 4530470 YP_884393.1 CDS MAV_5281 NC_008595.1 5434893 5436113 R identified by match to protein family HMM PF02518; match to protein family HMM PF07730; histidine kinase domain-containing protein complement(5434893..5436113) Mycobacterium avium 104 4528749 YP_884394.1 CDS MAV_5282 NC_008595.1 5436246 5436626 D hypothetical protein 5436246..5436626 Mycobacterium avium 104 4525610 YP_884395.1 CDS MAV_5284 NC_008595.1 5436619 5439477 D identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; membrane protein, MmpL family protein 5436619..5439477 Mycobacterium avium 104 4528090 YP_884396.1 CDS MAV_5285 NC_008595.1 5443680 5445167 R identified by match to protein family HMM PF05108; hypothetical protein complement(5443680..5445167) Mycobacterium avium 104 4530794 YP_884397.1 CDS MAV_5286 NC_008595.1 5445170 5446036 R identified by match to protein family HMM PF01464; transglycosylase complement(5445170..5446036) Mycobacterium avium 104 4528536 YP_884398.1 CDS MAV_5287 NC_008595.1 5446287 5447207 R hypothetical protein complement(5446287..5447207) Mycobacterium avium 104 4530315 YP_884399.1 CDS MAV_5288 NC_008595.1 5447317 5448576 R hypothetical protein complement(5447317..5448576) Mycobacterium avium 104 4529315 YP_884400.1 CDS MAV_5289 NC_008595.1 5448992 5449171 D hypothetical protein 5448992..5449171 Mycobacterium avium 104 4527287 YP_884401.1 CDS MAV_5290 NC_008595.1 5450022 5450675 R hypothetical protein complement(5450022..5450675) Mycobacterium avium 104 4528300 YP_884402.1 CDS MAV_5291 NC_008595.1 5450889 5451107 R hypothetical protein complement(5450889..5451107) Mycobacterium avium 104 4527248 YP_884403.1 CDS MAV_5292 NC_008595.1 5451347 5453314 R identified by match to protein family HMM PF06259; hypothetical protein complement(5451347..5453314) Mycobacterium avium 104 4529706 YP_884404.1 CDS MAV_5293 NC_008595.1 5453361 5453870 R hypothetical protein complement(5453361..5453870) Mycobacterium avium 104 4527128 YP_884405.1 CDS MAV_5294 NC_008595.1 5453895 5455337 R identified by match to protein family HMM PF01743; match to protein family HMM PF01966; match to protein family HMM TIGR00277; match to protein family HMM TIGR02692; tRNA adenylyltransferase complement(5453895..5455337) Mycobacterium avium 104 4525505 YP_884406.1 CDS MAV_5295 NC_008595.1 5455508 5456875 D hypothetical protein 5455508..5456875 Mycobacterium avium 104 4529298 YP_884407.1 CDS MAV_5296 NC_008595.1 5457278 5458027 D identified by match to protein family HMM PF00293; MutT/nudix family protein 5457278..5458027 Mycobacterium avium 104 4530679 YP_884408.1 CDS MAV_5298 NC_008595.1 5460422 5464057 D identified by match to protein family HMM PF03023; virulence factor mvin family protein 5460422..5464057 Mycobacterium avium 104 4529973 YP_884409.1 CDS MAV_5299 NC_008595.1 5464137 5464724 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription: in Mycobacterium bovis this protein has been shown to be active at high temperatures and during stationary phase; RNA polymerase sigma factor SigM 5464137..5464724 Mycobacterium avium 104 4530587 YP_884410.1 CDS MAV_5300 NC_008595.1 5464785 5465549 D hypothetical protein 5464785..5465549 Mycobacterium avium 104 4528102 YP_884411.1 CDS trxB NC_008595.1 5465563 5466663 D identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase 5465563..5466663 Mycobacterium avium 104 4528657 YP_884412.1 CDS trx NC_008595.1 5466660 5467013 D identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 5466660..5467013 Mycobacterium avium 104 4527462 YP_884413.1 CDS MAV_5303 NC_008595.1 5467147 5468367 D identified by match to protein family HMM PF01471; match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase 5467147..5468367 Mycobacterium avium 104 4525507 YP_884414.1 CDS MAV_5304 NC_008595.1 5468401 5469132 R hypothetical protein complement(5468401..5469132) Mycobacterium avium 104 4527959 YP_884415.1 CDS MAV_5305 NC_008595.1 5469204 5469380 D hypothetical protein 5469204..5469380 Mycobacterium avium 104 4529287 YP_884416.1 CDS MAV_5306 NC_008595.1 5469398 5470384 R identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; ParB-like partition proteins complement(5469398..5470384) Mycobacterium avium 104 4530783 YP_884417.1 CDS MAV_5307 NC_008595.1 5470420 5471517 R identified by match to protein family HMM PF01656; CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein complement(5470420..5471517) Mycobacterium avium 104 4528535 YP_884418.1 CDS gidB NC_008595.1 5471514 5472251 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(5471514..5472251) Mycobacterium avium 104 4528641 YP_884419.1 CDS MAV_5309 NC_008595.1 5472340 5472891 R identified by match to protein family HMM PF01424; R3H domain-containing protein complement(5472340..5472891) Mycobacterium avium 104 4526540 YP_884420.1 CDS MAV_5310 NC_008595.1 5472973 5474025 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC complement(5472973..5474025) Mycobacterium avium 104 4527380 YP_884421.1 CDS MAV_5311 NC_008595.1 5474018 5474365 R identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein complement(5474018..5474365) Mycobacterium avium 104 4526129 YP_884422.1 CDS rnpA NC_008595.1 5474362 5474721 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(5474362..5474721) Mycobacterium avium 104 4529383 YP_884423.1 CDS rpmH NC_008595.1 5474743 5474886 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(5474743..5474886) Mycobacterium avium 104 4529876 MAV_0008 tRNA MAV_0008 NC_008595.1 10858 10934 D tRNA-Ile 10858..10934 Mycobacterium avium 104 4527026 MAV_0010 tRNA MAV_0010 NC_008595.1 11094 11169 D tRNA-Ala 11094..11169 Mycobacterium avium 104 4528241 MAV_0025 tRNA MAV_0025 NC_008595.1 26767 26849 D tRNA-Leu 26767..26849 Mycobacterium avium 104 4527018 MAV_0243 tRNA MAV_0243 NC_008595.1 248200 248289 D tRNA-Ser 248200..248289 Mycobacterium avium 104 4527025 MAV_0251 tRNA MAV_0251 NC_008595.1 254077 254165 D tRNA-Ser 254077..254165 Mycobacterium avium 104 4528236 MAV_0252 tRNA MAV_0252 NC_008595.1 254201 254276 D tRNA-Arg 254201..254276 Mycobacterium avium 104 4528244 MAV_0325 tRNA MAV_0325 NC_008595.1 316233 316322 D tRNA-Ser 316233..316322 Mycobacterium avium 104 4530356 MAV_0380 tRNA MAV_0380 NC_008595.1 372356 372444 R tRNA-Ser complement(372356..372444) Mycobacterium avium 104 4528237 MAV_0419 tRNA MAV_0419 NC_008595.1 413550 413640 R tRNA-Sec complement(413550..413640) Mycobacterium avium 104 4527421 MAV_0443 tRNA MAV_0443 NC_008595.1 433270 433343 R tRNA-Pro complement(433270..433343) Mycobacterium avium 104 4527425 MAV_0521 tRNA MAV_0521 NC_008595.1 506943 507018 D tRNA-Thr 506943..507018 Mycobacterium avium 104 4527424 MAV_0699 tRNA MAV_0699 NC_008595.1 675799 675873 R tRNA-Thr complement(675799..675873) Mycobacterium avium 104 4527426 MAV_0842 tRNA MAV_0842 NC_008595.1 794402 794474 R tRNA-Lys complement(794402..794474) Mycobacterium avium 104 4528037 MAV_0843 tRNA MAV_0843 NC_008595.1 794599 794671 D tRNA-Glu 794599..794671 Mycobacterium avium 104 4528035 MAV_0844 tRNA MAV_0844 NC_008595.1 794701 794778 D tRNA-Asp 794701..794778 Mycobacterium avium 104 4528036 MAV_0845 tRNA MAV_0845 NC_008595.1 794805 794881 D tRNA-Phe 794805..794881 Mycobacterium avium 104 4527422 MAV_1041 tRNA MAV_1041 NC_008595.1 977532 977604 R tRNA-Arg complement(977532..977604) Mycobacterium avium 104 4527019 MAV_1106 tRNA MAV_1106 NC_008595.1 1048832 1048904 D tRNA-Ala 1048832..1048904 Mycobacterium avium 104 4528240 MAV_1158 tRNA MAV_1158 NC_008595.1 1101239 1101310 R tRNA-Gln complement(1101239..1101310) Mycobacterium avium 104 4527423 MAV_1180 tRNA MAV_1180 NC_008595.1 1127570 1127646 D tRNA-Leu 1127570..1127646 Mycobacterium avium 104 4530360 MAV_1506 tRNA MAV_1506 NC_008595.1 1463419 1463494 R tRNA-Arg complement(1463419..1463494) Mycobacterium avium 104 4528238 MAV_1561 tRNA MAV_1561 NC_008595.1 1521470 1521556 D tRNA-Leu 1521470..1521556 Mycobacterium avium 104 4527027 MAV_1657 tRNA MAV_1657 NC_008595.1 1627431 1627506 R tRNA-Lys complement(1627431..1627506) Mycobacterium avium 104 4528034 MAV_1663 tRNA MAV_1663 NC_008595.1 1634299 1634374 R tRNA-His complement(1634299..1634374) Mycobacterium avium 104 4528038 MAV_1684 tRNA MAV_1684 NC_008595.1 1655460 1655536 R tRNA-Arg complement(1655460..1655536) Mycobacterium avium 104 4526978 MAV_1710 tRNA MAV_1710 NC_008595.1 1685705 1685775 R tRNA-Gly complement(1685705..1685775) Mycobacterium avium 104 4527020 MAV_1711 tRNA MAV_1711 NC_008595.1 1685924 1686000 D tRNA-Pro 1685924..1686000 Mycobacterium avium 104 4527418 MAV_2046 tRNA MAV_2046 NC_008595.1 2043152 2043224 D tRNA-Asn 2043152..2043224 Mycobacterium avium 104 4530355 MAV_2096 tRNA MAV_2096 NC_008595.1 2097688 2097764 D tRNA-Met 2097688..2097764 Mycobacterium avium 104 4528040 MAV_2201 tRNA MAV_2201 NC_008595.1 2206439 2206513 D tRNA-Val 2206439..2206513 Mycobacterium avium 104 4528242 MAV_2349 tRNA MAV_2349 NC_008595.1 2352496 2352581 R tRNA-Leu complement(2352496..2352581) Mycobacterium avium 104 4527023 MAV_3062 tRNA MAV_3062 NC_008595.1 3128357 3128433 R tRNA-Pro complement(3128357..3128433) Mycobacterium avium 104 4530353 MAV_3160 tRNA MAV_3160 NC_008595.1 3251490 3251566 D tRNA-Leu 3251490..3251566 Mycobacterium avium 104 4530359 MAV_3527 tRNA MAV_3527 NC_008595.1 3668336 3668410 R tRNA-Val complement(3668336..3668410) Mycobacterium avium 104 4528239 MAV_3528 tRNA MAV_3528 NC_008595.1 3668582 3668657 D tRNA-Gly 3668582..3668657 Mycobacterium avium 104 4530357 MAV_3529 tRNA MAV_3529 NC_008595.1 3668683 3668756 D tRNA-Cys 3668683..3668756 Mycobacterium avium 104 4528033 MAV_3530 tRNA MAV_3530 NC_008595.1 3668773 3668847 D tRNA-Val 3668773..3668847 Mycobacterium avium 104 4530354 MAV_3841 tRNA MAV_3841 NC_008595.1 3968505 3968580 R tRNA-Glu complement(3968505..3968580) Mycobacterium avium 104 4528243 MAV_3842 tRNA MAV_3842 NC_008595.1 3968661 3968735 R tRNA-Gln complement(3968661..3968735) Mycobacterium avium 104 4528039 MAV_3973 tRNA MAV_3973 NC_008595.1 4098105 4098180 R tRNA-Ala complement(4098105..4098180) Mycobacterium avium 104 4530358 MAV_4136 tRNA MAV_4136 NC_008595.1 4261929 4262005 R tRNA-Met complement(4261929..4262005) Mycobacterium avium 104 4530361 MAV_4524 tRNA MAV_4524 NC_008595.1 4655944 4656016 R tRNA-Trp complement(4655944..4656016) Mycobacterium avium 104 4527419 MAV_4529 tRNA MAV_4529 NC_008595.1 4657821 4657897 R tRNA-Met complement(4657821..4657897) Mycobacterium avium 104 4527420 MAV_4530 tRNA MAV_4530 NC_008595.1 4657950 4658022 R tRNA-Thr complement(4657950..4658022) Mycobacterium avium 104 4527024 MAV_4574 tRNA MAV_4574 NC_008595.1 4709847 4709930 R tRNA-Tyr complement(4709847..4709930) Mycobacterium avium 104 4527021 MAV_4830 tRNA MAV_4830 NC_008595.1 4964046 4964119 D tRNA-Gly 4964046..4964119 Mycobacterium avium 104 4527022 MAV_1532 rRNA rrsA NC_008595.1 1487542 1489058 D 16S ribosomal RNA 1487542..1489058 Mycobacterium avium 104 4530020 MAV_1533 rRNA rrlA NC_008595.1 1489349 1492454 D 23S ribosomal RNA join(1489349..1490885,1490953..1492454) Mycobacterium avium 104 4530021 MAV_1534 rRNA rrfA NC_008595.1 1492547 1492662 D 5S ribosomal RNA 1492547..1492662 Mycobacterium avium 104 4528041