-- dump date 20140619_153032 -- class Genbank::CDS -- table cds_note -- id note YP_002274067.1 RepA; similar to the RepA proteins on several mycobacterial plasmids; similar to Q9ZHK2 putative replication protein of the plasmid pSOX from Rhodococcus sp. X309; C-term different compared to MUP001 YP_002274068.1 similar to hypothetical protein MUP002c from Mycobacterium ulcerans Agy99 YP_002274069.1 contains a helix turn helix motif; similar to hypothetical protein MUP003 from Mycobacterium ulcerans Agy99 YP_002274070.1 possible ParB; similar to hypothetical protein MUP004c from Mycobacterium ulcerans Agy99 YP_002274071.1 ParA; similar to possible chromosome partitioning protein ParA (MUP005c) from Mycobacterium ulcerans Agy99; similar to partitioning protein parA from Caulobacter crescentus, chromosome partitioning protein P from Bifidobacterium longum and Q8KBD6 ATPase from Chlorobium tepidum YP_002274072.1 similar to C-term only of P60-related proteins; not present in pMUM001; possible NLP/P60 related protein; similar to NlpC/P60 family proteins and cell wall-associated hydrolase domains; similar to NLP/P60 [Mycobacterium sp. KMS] YP_002274073.1 not present in pMUM001; similar to conserved hypothetical alanine rich protein [Mycobacterium flavescens PYR-GCK] and to conserved hypothetical alanine rich protein {Mvan_0068} of Mycobacterium vanbaalenii YP_002274074.1 MUP021-like protein; similar to other putative mycobacterial regulatory proteins like ZP_01278106.1 Transcription factor WhiB Mycobacterium sp. KMS; contains one predicted coiled coil segment; N-terminal similar to MUP021 YP_002274075.1 contains part of inverted region with respect to pMUM001 YP_002274076.1 contains part of inverted region with respect to pMUM001 YP_002274077.1 MUP008 ortholog; NusA is an essential multifunctional transcription elongation factor universally conserved among prokaryotes and archaea; similar to possible nucleic acid binding protein {MUP008} from Mycobacterium ulcerans Agy99; similar to the C-terminus of several N utilization substance proteins like YP_155358.1 transcription elongation factor NusA [Idiomarina loihiensis L2TR] YP_002274078.1 similar to hypothetical protein {MUP006c} from Mycobacterium ulcerans Agy99 YP_002274079.1 similar to other mycobacterial hypothetical proteins; not present in pMUM001 YP_002274080.1 similar to CAA98200.1 probable transmembrane protein kinase pknJ from Mycobacterium tuberculosis H37Rv; similar to other putative serine/threonine protein kinases like MUP011 M. ulcerans Agy99; part of a region not present in pMUM001 YP_002274081.1 possible pseudogene; not present in pMUM001 YP_002274082.1 not present in pMUM001 YP_002274083.1 not present in pMUM001 YP_002274084.1 similar to MUP010; not present in pMUM001 YP_002274085.1 similar to MUP009/010 YP_002274086.1 similar to MUP011 of pMUM001 YP_002274087.1 similar to MUP012/MUP013 YP_002274088.1 similar to MUP014 of pMUM001 YP_002274089.1 predicted to contain signal peptide; similar to possible secreted protein {MUP015c} from Mycobacterium ulcerans Agy99 YP_002274090.1 similar to MUP016 of pMUM001 YP_002274091.1 similar to MUP017 of pMUM001 YP_002274092.1 similar to MUP018 of pMUM001 YP_002274093.1 similar to to MUP019 YP_002274094.1 similar to MUP020 of pMUM001 YP_002274095.1 similar to MUP021 of pMUM001; similar to MULP_007 - duplication YP_002274096.1 not present in pMUM001 YP_002274097.1 not present in pMUM001 YP_002274098.1 not present in pMUM001 YP_002274099.1 not present in pMUM001 YP_002274100.1 not present in pMUM001 YP_002274101.1 not present in pMUM001 YP_002274102.1 similar to MUP023 of pMUM001 YP_002274103.1 similar to MUP024 of pMUM001 YP_002274104.1 missing terminal amino acids compared to MUP028 of pMUM001; putative non-2404, non-2606 transposase YP_002274106.1 similar to MUP027 of pMUM001 YP_002274107.1 2 identical paralogs in pMUM002; putative non-2404, non-2606 transposase; similar to MUP028 of pMUM001 YP_002274108.1 similar to region of pMUM001 YP_002274110.1 similar MUP041 YP_002274111.1 non-2404, non-2606 transposase; similar to MUP043 YP_002274112.1 similar to MUP028 of pMUM001; contains frameshift and alternative C-terminal compared to MUP028 YP_002274114.1 similar to possible thioesterase MUP038 from Mycobacterium ulcerans Agy99; similar to GenBank Accession Number AAO65353 and Swiss-Prot Accession Numbers Q84CJ0 LanU-like protein from Streptomyces murayamaensis, Q98NH0 Lactone- specific esterase from Rhizobium loti, Q9CD03 hypothetical protein ML2603 from Mycobacterium leprae, Q9XAK3 hypothetical protein SCO3599 from Streptomyces coelicolor, and Q8PQF3 hydrolase from Xanthomonas axonopodis; similar to Pfam PF02230 Phospholipase/Carboxylesterase and Pfam PF00561 alpha/beta hydrolase fold YP_002274115.1 composed of one extender module (module 9); required for the synthesis of the mycolactone core in Mycobacterium ulcerans (see Stinear et al., 2003); similar to proteins like Swiss-Prot Accession Number Q9S0R8 type I polyketide synthase AVES 1 from Streptomyces avermitilis; similar to Swiss-Prot Accession Numbers Q93NW8 AmphA from Streptomyces nodosus; similar to Pfam PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain, PF02801 ketoacyl-synt_C: Beta-ketoacyl synthase, C- terminal domain, PF00550 pp- binding: Phosphopantetheine attachment site and PF00698 Acyl_transf: Acyl transferase domain YP_002274117.1 similar to MUP041 and MUP033 YP_002274118.1 possible role in creating the ester link between the core and fatty-acyl side chain of mycolactone; may also play a role in cleavage of the terminal thioesters between the ACP domains and the fully extended polyketide products of MlsA and MlsB YP_002274119.1 similar to possible lipoprotein MUP057 from Mycobacterium ulcerans Agy99 YP_002274120.1 similar to MUP058 YP_002274121.1 not present in pMUM001 YP_002274122.1 not present in pMUM001 YP_002274123.1 similar to MUP066; start is potentially different compared to MUP066 YP_002274124.1 not present in pMUM001 YP_002274125.1 not present in pMUM001 YP_002274126.1 similar to MUP068 except in C-terminal region YP_002274127.1 similar to MUP070 YP_002274128.1 similar to MUP071 YP_002274129.1 similar to MUP072 and MUP073 YP_002274130.1 similar to MUP075 YP_002274131.1 similar to MUP076 YP_002274132.1 similar to MUP077 YP_002274133.1 similar to MUP078 YP_002274134.1 similar to MUP079 YP_002274135.1 similar to MUP080 YP_002274136.1 similar to MUP081 YP_007366655.1 Zinc ribbon containing portion YP_007366688.1 Ortholog in E. coli, YceP (BssS) regulates Escherichia coli K-12 biofilm formation by influencing cell signaling. YP_007366696.1 contains N-terminal Mycothiol maleylpyruvate isomerase domain YP_007366698.1 possible transcriptional regulator YP_007366733.1 contains two MaoC acyl dehydratase domains YP_007366761.1 Major Facilitator Superfamily YP_007366770.1 MarR family YP_007366771.1 contains RecF/RecN/SMC N-terminal domain YP_007366778.1 contains SnoaL-like domain YP_007366846.1 contains PaaX domain YP_007366851.1 possible polyketide cyclase YP_007366867.1 contains Phosphopantetheine attachment site YP_007366908.1 possible polyketide cyclase YP_007366943.1 contains Polyketide cyclase / dehydrase and lipid transport domain YP_007366956.1 contains SnoaL-like domain YP_007367047.1 contains NYN domain YP_007367058.1 possible methyltransferase YP_007367162.1 contains SnoaL domain YP_007367171.1 contains C-terminal Diacylglycerol kinase catalytic domain YP_007367193.1 contains Mycothiol maleylpyruvate isomerase N-terminal domain YP_007367235.1 contains MobA-like NTP transferase domain YP_007367251.1 contains methyltransferase domain YP_007367309.1 contains ANTAR domain and PAS fold YP_007367330.1 contains double stranded helix domain YP_007367337.1 possible anti-sigma factor YP_007367363.1 Carboxymuconolactone decarboxylase family YP_007367423.1 contains STAS domain YP_007367511.1 contains PIN domain YP_007367517.1 contains Helix-turn-helix domain, probably involved in transcriptional regulation YP_007367530.1 contains Helix-turn-helix domain YP_007367560.1 possibly contains an iron binding domain YP_007367614.1 contains YCII-related domain YP_007367642.1 contains PaaX domain YP_007367787.1 impB/mucB/samB family YP_007367790.1 contains MaoC-like domain YP_007367799.1 contains Roadblock/LC7 domain YP_007367841.1 HpcH/HpaI aldolase/citrate lyase family YP_007367886.1 contains Bacterial membrane flanked domain YP_007367897.1 Cation efflux family YP_007367905.1 contains NUDIX domain YP_007367914.1 contains FAD binding domain YP_007367944.1 missing N-term, possible pseudogene YP_007367960.1 YbaK / prolyl-tRNA synthetases associated domain YP_007368013.1 contains SnoaL-like domain YP_007368081.1 Universal stress protein family YP_007368085.1 contains Wax ester synthase-like Acyl-CoA acyltransferase domain YP_007368110.1 possible Glyoxalase YP_007368114.1 contains N-terminal Mycothiol maleylpyruvate isomerase domain YP_007368124.1 contains a sugar binding domain YP_007368133.1 contains Nuclear transport factor 2 (NTF2) domain YP_007368142.1 Patatin-like phospholipase YP_007368143.1 contains SPFH domain YP_007368148.1 possibly involved in Polyketide cyclase / dehydrase and lipid transport YP_007368153.1 possible endonuclease YP_007368187.1 contains HD domain YP_007368222.1 probably involved in Polyketide cyclase / dehydrase and lipid transport YP_007368236.1 contains NUDIX domain YP_007368267.1 Cobalamin-independent synthase, Catalytic domain YP_007368370.1 possible lumazine-binding domain YP_007368380.1 contains acyltransferase domain YP_007368437.1 contains NifU-like domain YP_007368508.1 possible NADPH-dependent FMN reductase YP_007368537.1 contains C-terminal FhuF 2Fe-2S domain YP_007368559.1 probable endopeptidase YP_007368653.1 possible monooxygenase YP_007368671.1 possible acyltransferase YP_007368679.1 contains N-terminal NYN domain YP_007368691.1 contains Cupin domain YP_007368704.1 contains CBS domain YP_007368774.1 predicted esterase YP_007368821.1 possible oxidoreductase YP_007368828.1 contains MOSC domain and 3-alpha domain YP_007368854.1 contains SnoaL-like domain YP_007368857.1 PMID: 20974274 YP_007368858.1 possible Polyketide cyclase or involved in dehydrase and lipid transport YP_007368868.1 contains YceI-like domain YP_007368889.1 contains STAS domain YP_007368897.1 Activator of Hsp90 ATPase homolog 1-like protein YP_007368900.1 part of Metallo-beta-lactamase superfamily YP_007368926.1 contains SnoaL-like domain YP_007368949.1 SCP-2 sterol transfer family YP_007368953.1 contains SnoaL-like domain YP_007368959.1 TIGRFAM: virulence factor Mce family protein PFAM: Mammalian cell entry related domain protein KEGG: mva:Mvan_0515 virulence factor Mce family protein YP_007368966.1 contains YacP-like NYN domain YP_007369083.1 contains Nuclear transport factor 2 (NTF2) domain YP_007369112.1 acyltransferase family YP_007369125.1 AhpC/TSA family, possible redoxin YP_007369207.1 possible Pyridoxamine 5'-phosphate oxidase YP_007369222.1 truncated N-term, possible pseudogene? YP_007369248.1 possible pseudogene YP_007369417.1 possible involvement in acid resistance YP_007369462.1 The exact function of MMAR_2380 is unknown, but this protein is essential for the presence of a mannose cap on LAM. YP_007369477.1 contains Methyltransferase domain YP_007369495.1 Carboxymuconolactone decarboxylase family YP_007369533.1 contains von Willebrand factor type A domain YP_007369575.1 PAC2 family YP_007369593.1 probable pseudogene YP_007369699.1 Thioesterase superfamily YP_007369710.1 Sulfotransferase domain YP_007369726.1 Glyoxalase-like domain YP_007369730.1 ChrR Cupin-like domain YP_007369732.1 Cupin domain YP_007369756.1 Helix-turn-helix domain YP_007369848.1 DSBA-like thioredoxin domain YP_007369853.1 FAD binding domain YP_007369872.1 possible Adenylate kinase YP_007369919.1 possible monooxygenase YP_007369964.1 Predicted enzyme related to lactoylglutathione lyase YP_007369975.1 contains Lumazine-binding domain YP_007370047.1 N-terminal Mycothiol maleylpyruvate isomerase domain YP_007370052.1 Carboxymuconolactone decarboxylase family YP_007370118.1 Methyltransferase possibly involved in tellurite resitance YP_007370124.1 also contains N-terminal nucleotide binding domain YP_007370162.1 contains DSBA-like thioredoxin domain - also possibly involved in polyketide biosynthesis YP_007370259.1 contains Ricin-type beta-trefoil lectin domain YP_007370293.1 possibly interacts with siderophore like proteins YP_007370319.1 Mov34/MPN/PAD-1 family YP_007370346.1 N-terminal 100 aa have similarity to ATP synthase I chain YP_007370380.1 contains Glyoxalase-like domain YP_007370449.1 truncated compared to MM and MU at N-term YP_007370451.1 strong similarity to Suppressor of fused protein YP_007370477.1 possibly involved in cell division YP_007370497.1 contains MaoC like domain, possibly involved in nucleotide binding YP_007370499.1 contains a MaoC like domain YP_007370561.1 NAD dependent epimerase/dehydratase family YP_007370580.1 NAD dependent epimerase/dehydratase family protein YP_007370599.1 OsmC-like protein YP_007370613.1 possible transcription termination factor YP_007370635.1 contains SnoaL-like domain YP_007370651.1 contains Rhodanese-like domain YP_007370686.1 contains Adenylate and Guanylate cyclase catalytic domain YP_007370756.1 has similarity to flagellar synthesis proteins YP_007371099.1 encapsulating protein for peroxidase. These proteins, referred to as encapsulins, form nanocompartments within the bacterium which contain ferritin-like proteins or peroxidases YP_007371594.1 Reported to be an Esx-1 substrate with new-pole cell wall association YP_007371643.1 contains RH3 domain