-- dump date 20140619_153734 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_884424.1 118468117 4535615 499..1692 1 NC_008596.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1692 dnaN 4535615 dnaN Mycobacterium smegmatis str. MC2 155 DNA polymerase III subunit beta YP_884424.1 499 D 246196 CDS YP_884425.1 118471954 4536178 1721..2614 1 NC_008596.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 2614 4536178 MSMEG_0002 Mycobacterium smegmatis str. MC2 155 6-phosphogluconate dehydrogenase YP_884425.1 1721 D 246196 CDS YP_884426.1 118467917 4532650 2624..3778 1 NC_008596.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 3778 recF 4532650 recF Mycobacterium smegmatis str. MC2 155 recombination protein F YP_884426.1 2624 D 246196 CDS YP_884427.1 118470893 4537198 3775..4359 1 NC_008596.1 RecF-gyrB intergenic region protein; identified by match to protein family HMM PF05258; hypothetical protein 4359 4537198 MSMEG_0004 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884427.1 3775 D 246196 CDS YP_884428.1 118470567 4531510 4591..6618 1 NC_008596.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 6618 gyrB 4531510 gyrB Mycobacterium smegmatis str. MC2 155 DNA gyrase subunit B YP_884428.1 4591 D 246196 CDS YP_884429.1 118467811 4535988 6648..9176 1 NC_008596.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 9176 gyrA 4535988 gyrA Mycobacterium smegmatis str. MC2 155 DNA gyrase subunit A YP_884429.1 6648 D 246196 CDS YP_884430.1 118470742 4533293 9229..10011 1 NC_008596.1 hypothetical protein 10011 4533293 MSMEG_0007 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884430.1 9229 D 246196 CDS YP_884431.1 118473279 4535541 10184..10276 1 NC_008596.1 hypothetical protein 10276 4535541 MSMEG_0009 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884431.1 10184 D 246196 CDS YP_884432.1 118470556 4531499 10411..11211 1 NC_008596.1 identified by match to protein family HMM PF04954; match to protein family HMM PF08021; hypothetical protein 11211 4531499 MSMEG_0011 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884432.1 10411 D 246196 CDS YP_884433.1 118467909 4531265 11215..12246 1 NC_008596.1 identified by match to protein family HMM PF01032; ferric enterobactin transporter permease FepD 12246 4531265 MSMEG_0012 Mycobacterium smegmatis str. MC2 155 ferric enterobactin transporter permease FepD YP_884433.1 11215 D 246196 CDS YP_884434.1 118471554 4532202 13310..14140 1 NC_008596.1 identified by match to protein family HMM PF00005; ferric enterobactin transport ATP-binding protein FepC 14140 4532202 MSMEG_0015 Mycobacterium smegmatis str. MC2 155 ferric enterobactin transport ATP-binding protein FepC YP_884434.1 13310 D 246196 CDS YP_884435.1 118470693 4532530 complement(14130..15098) 1 NC_008596.1 identified by match to protein family HMM PF00551; match to protein family HMM PF02911; Formyl transferase 15098 4532530 MSMEG_0014 Mycobacterium smegmatis str. MC2 155 Formyl transferase YP_884435.1 14130 R 246196 CDS YP_884436.1 118469728 4537603 15256..15522 1 NC_008596.1 identified by match to protein family HMM PF03621; hypothetical protein 15522 4537603 MSMEG_0016 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884436.1 15256 D 246196 CDS YP_884437.1 118472346 4531597 15525..17252 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter permease 17252 4531597 MSMEG_0017 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_884437.1 15525 D 246196 CDS YP_884438.1 118472884 4534027 17249..19018 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter permease 19018 4534027 MSMEG_0018 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_884438.1 17249 D 246196 CDS YP_884439.1 118470215 4533906 19052..41623 1 NC_008596.1 identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; amino acid adenylation protein 41623 4533906 MSMEG_0019 Mycobacterium smegmatis str. MC2 155 amino acid adenylation protein YP_884439.1 19052 D 246196 CDS YP_884440.1 118469059 4537245 complement(41689..42636) 1 NC_008596.1 identified by match to protein family HMM PF01497; periplasmic binding protein 42636 4537245 MSMEG_0020 Mycobacterium smegmatis str. MC2 155 periplasmic binding protein YP_884440.1 41689 R 246196 CDS YP_884441.1 118473676 4531073 42944..43354 1 NC_008596.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 43354 panD 4531073 panD Mycobacterium smegmatis str. MC2 155 aspartate alpha-decarboxylase YP_884441.1 42944 D 246196 CDS YP_884442.1 118471393 4534987 43366..44688 1 NC_008596.1 L-ornithine 5-monooxygenase 44688 4534987 MSMEG_0022 Mycobacterium smegmatis str. MC2 155 L-ornithine 5-monooxygenase YP_884442.1 43366 D 246196 CDS YP_884443.1 118472943 4531759 complement(44692..45102) 1 NC_008596.1 hypothetical protein 45102 4531759 MSMEG_0023 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884443.1 44692 R 246196 CDS YP_884444.1 118468422 4535580 45223..45750 1 NC_008596.1 identified by match to protein family HMM PF00160; peptidyl-prolyl cis-trans isomerase B 45750 4535580 MSMEG_0024 Mycobacterium smegmatis str. MC2 155 peptidyl-prolyl cis-trans isomerase B YP_884444.1 45223 D 246196 CDS YP_884445.1 118469885 4536577 complement(45854..46261) 1 NC_008596.1 hypothetical protein 46261 4536577 MSMEG_0025 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884445.1 45854 R 246196 CDS YP_884446.1 118471515 4537226 complement(46417..46701) 1 NC_008596.1 integral membrane protein involved in inhibition of the Z-ring formation; septation inhibitor protein 46701 4537226 MSMEG_0026 Mycobacterium smegmatis str. MC2 155 septation inhibitor protein YP_884446.1 46417 R 246196 CDS YP_884447.1 118469202 4535791 46797..47546 1 NC_008596.1 identified by match to protein family HMM PF05949; hypothetical protein 47546 4535791 MSMEG_0027 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884447.1 46797 D 246196 CDS YP_884448.1 118467576 4532866 47564..48238 1 NC_008596.1 aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity; para-aminobenzoate synthase component II 48238 4532866 MSMEG_0029 Mycobacterium smegmatis str. MC2 155 para-aminobenzoate synthase component II YP_884448.1 47564 D 246196 CDS YP_884449.1 118471844 4536298 complement(48216..50093) 1 NC_008596.1 identified by match to protein family HMM PF00069; match to protein family HMM PF03793; serine-threonine protein kinase 50093 4536298 MSMEG_0028 Mycobacterium smegmatis str. MC2 155 serine-threonine protein kinase YP_884449.1 48216 R 246196 CDS YP_884450.1 118472918 4531207 complement(50090..51349) 1 NC_008596.1 identified by match to protein family HMM PF00069; serine/threonine protein kinase 51349 pknA 4531207 pknA Mycobacterium smegmatis str. MC2 155 serine/threonine protein kinase YP_884450.1 50090 R 246196 CDS YP_884451.1 118469030 4530882 complement(51381..52856) 1 NC_008596.1 identified by match to protein family HMM PF00905; penicillin binding protein transpeptidase domain-containing protein 52856 4530882 MSMEG_0031 Mycobacterium smegmatis str. MC2 155 penicillin binding protein transpeptidase domain-containing protein YP_884451.1 51381 R 246196 CDS YP_884452.1 118468873 4533758 complement(52853..54268) 1 NC_008596.1 identified by match to protein family HMM PF01098; cell cycle protein, FtsW/RodA/SpoVE family protein 54268 4533758 MSMEG_0032 Mycobacterium smegmatis str. MC2 155 cell cycle protein, FtsW/RodA/SpoVE family protein YP_884452.1 52853 R 246196 CDS YP_884453.1 118470123 4534494 complement(54265..55803) 1 NC_008596.1 identified by match to protein family HMM PF00481; protein phosphatase 2C 55803 4534494 MSMEG_0033 Mycobacterium smegmatis str. MC2 155 protein phosphatase 2C YP_884453.1 54265 R 246196 CDS YP_884454.1 118472708 4531676 complement(55826..56293) 1 NC_008596.1 identified by match to protein family HMM PF00498; FHA domain-containing protein 56293 4531676 MSMEG_0034 Mycobacterium smegmatis str. MC2 155 FHA domain-containing protein YP_884454.1 55826 R 246196 CDS YP_884455.1 118471786 4536357 complement(56429..57892) 1 NC_008596.1 identified by match to protein family HMM PF00498; FHA domain-containing protein 57892 4536357 MSMEG_0035 Mycobacterium smegmatis str. MC2 155 FHA domain-containing protein YP_884455.1 56429 R 246196 CDS YP_884456.1 118467853 4532875 complement(58033..58140) 1 NC_008596.1 hypothetical protein 58140 4532875 MSMEG_0036 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884456.1 58033 R 246196 CDS YP_884457.1 118469105 4535298 complement(58655..59029) 1 NC_008596.1 small membrane hydrophobic protein 59029 4535298 MSMEG_0039 Mycobacterium smegmatis str. MC2 155 small membrane hydrophobic protein YP_884457.1 58655 R 246196 CDS YP_884458.1 118469688 4536821 complement(59041..59346) 1 NC_008596.1 hypothetical protein 59346 4536821 MSMEG_0040 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884458.1 59041 R 246196 CDS YP_884459.1 118468567 4533701 complement(59348..59824) 1 NC_008596.1 hypothetical protein 59824 4533701 MSMEG_0041 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884459.1 59348 R 246196 CDS YP_884460.1 118467560 4535514 59900..60463 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 60463 4535514 MSMEG_0042 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_884460.1 59900 D 246196 CDS YP_884461.1 118473743 4537348 complement(60479..61303) 1 NC_008596.1 identified by match to protein family HMM PF02900; extradiol ring-cleavage dioxygenase, class III enzyme, subunit B 61303 4537348 MSMEG_0043 Mycobacterium smegmatis str. MC2 155 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YP_884461.1 60479 R 246196 CDS YP_884462.1 118470024 4531639 61470..63548 1 NC_008596.1 hypothetical protein 63548 4531639 MSMEG_0044 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884462.1 61470 D 246196 CDS YP_884463.1 118469427 4534323 63545..66013 1 NC_008596.1 hypothetical protein 66013 4534323 MSMEG_0045 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884463.1 63545 D 246196 CDS YP_884464.1 118468267 4534000 66010..67167 1 NC_008596.1 hypothetical protein 67167 4534000 MSMEG_0046 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884464.1 66010 D 246196 CDS YP_884465.1 118467476 4536994 complement(67182..68117) 1 NC_008596.1 hypothetical protein 68117 4536994 MSMEG_0047 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884465.1 67182 R 246196 CDS YP_884466.1 118471734 4536420 68264..68767 1 NC_008596.1 identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 68767 4536420 MSMEG_0048 Mycobacterium smegmatis str. MC2 155 pyridoxamine 5'-phosphate oxidase YP_884466.1 68264 D 246196 CDS YP_884467.1 118468908 4537070 complement(68769..69734) 1 NC_008596.1 identified by match to protein family HMM PF02678; match to protein family HMM PF05726; pirin 69734 4537070 MSMEG_0049 Mycobacterium smegmatis str. MC2 155 pirin YP_884467.1 68769 R 246196 CDS YP_884468.1 118468746 4534274 69779..70045 1 NC_008596.1 hypothetical protein 70045 4534274 MSMEG_0050 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884468.1 69779 D 246196 CDS YP_884469.1 118473042 4533195 complement(70234..70527) 1 NC_008596.1 identified by match to protein family HMM PF02467; transcription factor WhiB family protein 70527 4533195 MSMEG_0051 Mycobacterium smegmatis str. MC2 155 transcription factor WhiB family protein YP_884469.1 70234 R 246196 CDS YP_884470.1 118467671 4536937 70911..71690 1 NC_008596.1 hypothetical protein 71690 4536937 MSMEG_0052 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884470.1 70911 D 246196 CDS YP_884471.1 118472505 4533735 71738..72823 1 NC_008596.1 identified by similarity to GB:CAD18826.1; ISMsm2, transposase 72823 4533735 MSMEG_0054 Mycobacterium smegmatis str. MC2 155 ISMsm2, transposase YP_884471.1 71738 D 246196 CDS YP_884472.1 118471679 4536441 complement(72820..74208) 1 NC_008596.1 hypothetical protein 74208 4536441 MSMEG_0053 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884472.1 72820 R 246196 CDS YP_884473.1 118469229 4535365 74600..76177 1 NC_008596.1 hypothetical protein 76177 4535365 MSMEG_0055 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884473.1 74600 D 246196 CDS YP_884474.1 118469912 4535566 76213..76530 1 NC_008596.1 hypothetical protein 76530 4535566 MSMEG_0056 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884474.1 76213 D 246196 CDS YP_884475.1 118472873 4531357 76535..77383 1 NC_008596.1 hypothetical protein 77383 4531357 MSMEG_0057 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884475.1 76535 D 246196 CDS YP_884476.1 118470703 4532540 77398..77925 1 NC_008596.1 hypothetical protein 77925 4532540 MSMEG_0058 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884476.1 77398 D 246196 CDS YP_884477.1 118472323 4532911 77918..79642 1 NC_008596.1 identified by match to protein family HMM PF00004; ATPase AAA 79642 4532911 MSMEG_0059 Mycobacterium smegmatis str. MC2 155 ATPase AAA YP_884477.1 77918 D 246196 CDS YP_884478.1 118470512 4537565 79650..81089 1 NC_008596.1 identified by match to protein family HMM PF05108; hypothetical protein 81089 4537565 MSMEG_0060 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884478.1 79650 D 246196 CDS YP_884479.1 118472312 4532900 81089..83317 1 NC_008596.1 identified by match to protein family HMM PF01580; ftsk/SpoIIIE family protein 83317 4532900 MSMEG_0061 Mycobacterium smegmatis str. MC2 155 ftsk/SpoIIIE family protein YP_884479.1 81089 D 246196 CDS YP_884480.1 118469179 4534286 83318..85099 1 NC_008596.1 identified by match to protein family HMM PF01580; ftsk/SpoIIIE family protein 85099 4534286 MSMEG_0062 Mycobacterium smegmatis str. MC2 155 ftsk/SpoIIIE family protein YP_884480.1 83318 D 246196 CDS YP_884481.1 118467647 4534995 85248..85541 1 NC_008596.1 PE family protein 85541 4534995 MSMEG_0063 Mycobacterium smegmatis str. MC2 155 PE family protein YP_884481.1 85248 D 246196 CDS YP_884482.1 118468579 4532706 85616..86911 1 NC_008596.1 identified by match to protein family HMM PF00823; PPE family protein 86911 4532706 MSMEG_0064 Mycobacterium smegmatis str. MC2 155 PPE family protein YP_884482.1 85616 D 246196 CDS YP_884483.1 118473747 4537352 86997..87299 1 NC_008596.1 hypothetical protein 87299 4537352 MSMEG_0065 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884483.1 86997 D 246196 CDS YP_884484.1 118473376 4536621 87331..87618 1 NC_008596.1 early secretory antigenic target, 6 kDa 87618 4536621 MSMEG_0066 Mycobacterium smegmatis str. MC2 155 early secretory antigenic target, 6 kDa YP_884484.1 87331 D 246196 CDS YP_884485.1 118472342 4534233 87738..89162 1 NC_008596.1 hypothetical protein 89162 4534233 MSMEG_0067 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884485.1 87738 D 246196 CDS YP_884486.1 118473897 4536592 89159..90691 1 NC_008596.1 identified by match to protein family HMM PF04600; match to protein family HMM TIGR02958; transmembrane protein 90691 4536592 MSMEG_0068 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_884486.1 89159 D 246196 CDS YP_884487.1 118468706 4534696 91173..91874 1 NC_008596.1 translation initiation factor IF-2 91874 4534696 MSMEG_0069 Mycobacterium smegmatis str. MC2 155 translation initiation factor IF-2 YP_884487.1 91173 D 246196 CDS YP_884488.1 118468104 4535602 92737..93072 1 NC_008596.1 hypothetical protein 93072 4535602 MSMEG_0070 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884488.1 92737 D 246196 CDS YP_884489.1 118467650 4534998 93072..95339 1 NC_008596.1 hypothetical protein 95339 4534998 MSMEG_0071 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884489.1 93072 D 246196 CDS YP_884490.1 118472235 4532456 96469..97935 1 NC_008596.1 identified by similarity to GP:2935133; match to protein family HMM PF01609; IS1549, transposase 97935 4532456 MSMEG_0074 Mycobacterium smegmatis str. MC2 155 IS1549, transposase YP_884490.1 96469 D 246196 CDS YP_884491.1 118471626 4536501 99229..99585 1 NC_008596.1 hypothetical protein 99585 4536501 MSMEG_0075 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884491.1 99229 D 246196 CDS YP_884492.1 118474029 4533442 99798..101360 1 NC_008596.1 antigen MTB48 101360 4533442 MSMEG_0076 Mycobacterium smegmatis str. MC2 155 antigen MTB48 YP_884492.1 99798 D 246196 CDS YP_884493.1 118470100 4534935 complement(101776..102093) 1 NC_008596.1 hypothetical protein 102093 4534935 MSMEG_0077 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884493.1 101776 R 246196 CDS YP_884494.1 118473597 4534871 complement(102127..102702) 1 NC_008596.1 hypothetical protein 102702 4534871 MSMEG_0078 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884494.1 102127 R 246196 CDS YP_884495.1 118467832 4534583 complement(102936..103682) 1 NC_008596.1 hypothetical protein 103682 4534583 MSMEG_0079 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884495.1 102936 R 246196 CDS YP_884496.1 118469183 4534290 complement(103713..104243) 1 NC_008596.1 hypothetical protein 104243 4534290 MSMEG_0080 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884496.1 103713 R 246196 CDS YP_884497.1 118468461 4537282 complement(104251..104583) 1 NC_008596.1 hypothetical protein 104583 4537282 MSMEG_0081 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884497.1 104251 R 246196 CDS YP_884498.1 118468438 4535596 complement(104594..105988) 1 NC_008596.1 hypothetical protein 105988 4535596 MSMEG_0082 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884498.1 104594 R 246196 CDS YP_884499.1 118467898 4531254 complement(105985..107334) 1 NC_008596.1 identified by match to protein family HMM PF00082; membrane-anchored mycosin mycp1 107334 4531254 MSMEG_0083 Mycobacterium smegmatis str. MC2 155 membrane-anchored mycosin mycp1 YP_884499.1 105985 R 246196 CDS YP_884500.1 118467582 4532872 complement(107565..107822) 1 NC_008596.1 identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003; phosphocarrier protein HPr 107822 4532872 MSMEG_0084 Mycobacterium smegmatis str. MC2 155 phosphocarrier protein HPr YP_884500.1 107565 R 246196 CDS YP_884501.1 118468259 4533992 complement(107834..109849) 1 NC_008596.1 identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427; PTS system, Fru family protein, IIABC components 109849 4533992 MSMEG_0085 Mycobacterium smegmatis str. MC2 155 PTS system, Fru family protein, IIABC components YP_884501.1 107834 R 246196 CDS YP_884502.1 118472636 4537655 complement(109846..110829) 1 NC_008596.1 identified by match to protein family HMM PF00294; 1-phosphofructokinase 110829 4537655 MSMEG_0086 Mycobacterium smegmatis str. MC2 155 1-phosphofructokinase YP_884502.1 109846 R 246196 CDS YP_884503.1 118468789 4535307 complement(110826..111593) 1 NC_008596.1 identified by match to protein family HMM PF00455; match to protein family HMM PF08220; glucitol operon repressor 111593 4535307 MSMEG_0087 Mycobacterium smegmatis str. MC2 155 glucitol operon repressor YP_884503.1 110826 R 246196 CDS YP_884504.1 118473073 4533147 111735..113369 1 NC_008596.1 identified by match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; phosphoenolpyruvate-protein phosphotransferase 113369 ptsI 4533147 ptsI Mycobacterium smegmatis str. MC2 155 phosphoenolpyruvate-protein phosphotransferase YP_884504.1 111735 D 246196 CDS YP_884505.1 118472785 4533128 113433..114407 1 NC_008596.1 identified by match to protein family HMM PF02678; match to protein family HMM PF05726; chromosome condensation protein 114407 4533128 MSMEG_0089 Mycobacterium smegmatis str. MC2 155 chromosome condensation protein YP_884505.1 113433 D 246196 CDS YP_884506.1 118471193 4531487 complement(114447..116594) 1 NC_008596.1 hypothetical protein 116594 4531487 MSMEG_0090 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884506.1 114447 R 246196 CDS YP_884507.1 118471952 4536176 complement(116600..117193) 1 NC_008596.1 transcriptional regulator 117193 4536176 MSMEG_0091 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_884507.1 116600 R 246196 CDS YP_884508.1 118469318 4533383 117306..117941 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulatory protein 117941 4533383 MSMEG_0092 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_884508.1 117306 D 246196 CDS YP_884509.1 118468041 4531398 118003..118965 1 NC_008596.1 identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase 118965 4531398 MSMEG_0093 Mycobacterium smegmatis str. MC2 155 methyltransferase YP_884509.1 118003 D 246196 CDS YP_884510.1 118467600 4531416 118962..119897 1 NC_008596.1 identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase 119897 4531416 MSMEG_0095 Mycobacterium smegmatis str. MC2 155 methyltransferase YP_884510.1 118962 D 246196 CDS YP_884511.1 118472453 4533594 complement(119878..120057) 1 NC_008596.1 hypothetical protein 120057 4533594 MSMEG_0094 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884511.1 119878 R 246196 CDS YP_884512.1 118470219 4533910 120261..121115 1 NC_008596.1 identified by match to protein family HMM PF00106; peroxisomal hydratase-dehydrogenase-epimerase 121115 4533910 MSMEG_0096 Mycobacterium smegmatis str. MC2 155 peroxisomal hydratase-dehydrogenase-epimerase YP_884512.1 120261 D 246196 CDS YP_884513.1 118467805 4535982 121119..122084 1 NC_008596.1 identified by match to protein family HMM PF00107; oxidoreductase, zinc-binding dehydrogenase 122084 4535982 MSMEG_0097 Mycobacterium smegmatis str. MC2 155 oxidoreductase, zinc-binding dehydrogenase YP_884513.1 121119 D 246196 CDS YP_884514.1 118472123 4532165 122105..122818 1 NC_008596.1 identified by match to protein family HMM PF01209; methyltransferase 122818 4532165 MSMEG_0098 Mycobacterium smegmatis str. MC2 155 methyltransferase YP_884514.1 122105 D 246196 CDS YP_884515.1 118469893 4533212 122829..123314 1 NC_008596.1 hypothetical protein 123314 4533212 MSMEG_0099 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884515.1 122829 D 246196 CDS YP_884516.1 118472794 4533137 123311..123865 1 NC_008596.1 hypothetical protein 123865 4533137 MSMEG_0101 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884516.1 123311 D 246196 CDS YP_884517.1 118470992 4531912 complement(123837..124643) 1 NC_008596.1 phosphotyrosine protein phosphatase ptpb 124643 4531912 MSMEG_0100 Mycobacterium smegmatis str. MC2 155 phosphotyrosine protein phosphatase ptpb YP_884517.1 123837 R 246196 CDS YP_884518.1 118470550 4533004 complement(124640..125875) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 125875 4533004 MSMEG_0102 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_884518.1 124640 R 246196 CDS YP_884519.1 118469137 4532553 complement(125900..127099) 1 NC_008596.1 identified by match to protein family HMM PF07690; major facilitator family protein transporter 127099 4532553 MSMEG_0103 Mycobacterium smegmatis str. MC2 155 major facilitator family protein transporter YP_884519.1 125900 R 246196 CDS YP_884520.1 118467624 4534198 complement(127143..128024) 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 128024 4534198 MSMEG_0104 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_884520.1 127143 R 246196 CDS YP_884521.1 118471878 4536254 128084..128734 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; LuxR family transcriptional regulator 128734 4536254 MSMEG_0105 Mycobacterium smegmatis str. MC2 155 LuxR family transcriptional regulator YP_884521.1 128084 D 246196 CDS YP_884522.1 118471818 4536311 128750..129916 1 NC_008596.1 identified by match to protein family HMM PF02518; sensory histidine kinase 129916 4536311 MSMEG_0106 Mycobacterium smegmatis str. MC2 155 sensory histidine kinase YP_884522.1 128750 D 246196 CDS YP_884523.1 118473313 4535185 complement(129926..131527) 1 NC_008596.1 identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; cell envelope-related function transcriptional attenuator 131527 4535185 MSMEG_0107 Mycobacterium smegmatis str. MC2 155 cell envelope-related function transcriptional attenuator YP_884523.1 129926 R 246196 CDS YP_884524.1 118468177 4535049 complement(131570..132709) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 132709 4535049 MSMEG_0108 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_884524.1 131570 R 246196 CDS YP_884525.1 118471082 4537525 complement(132711..134153) 1 NC_008596.1 identified by similarity to SP:P07002; match to protein family HMM PF02233; NAD(P) transhydrogenase subunit beta 134153 pntB 4537525 pntB Mycobacterium smegmatis str. MC2 155 NAD(P) transhydrogenase subunit beta YP_884525.1 132711 R 246196 CDS YP_884526.1 118472776 4531867 complement(134172..135713) 1 NC_008596.1 forms a tetramer composed of 2 subunit alphas and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha 135713 pntA 4531867 pntA Mycobacterium smegmatis str. MC2 155 NAD(P) transhydrogenase subunit alpha YP_884526.1 134172 R 246196 CDS YP_884527.1 118471294 4532188 complement(135783..136787) 1 NC_008596.1 identified by match to protein family HMM PF01544; magnesium transporter 136787 4532188 MSMEG_0111 Mycobacterium smegmatis str. MC2 155 magnesium transporter YP_884527.1 135783 R 246196 CDS YP_884528.1 118468772 4535663 complement(136796..136912) 1 NC_008596.1 hypothetical protein 136912 4535663 MSMEG_0112 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884528.1 136796 R 246196 CDS YP_884529.1 118472743 4532372 136950..137810 1 NC_008596.1 identified by match to protein family HMM PF00528; taurine transporter permease TauC 137810 4532372 MSMEG_0113 Mycobacterium smegmatis str. MC2 155 taurine transporter permease TauC YP_884529.1 136950 D 246196 CDS YP_884530.1 118472450 4533591 137817..138845 1 NC_008596.1 identified by match to protein family HMM PF04069; extracellular solute-binding protein 138845 4533591 MSMEG_0114 Mycobacterium smegmatis str. MC2 155 extracellular solute-binding protein YP_884530.1 137817 D 246196 CDS YP_884531.1 118468961 4533525 138829..139626 1 NC_008596.1 identified by match to protein family HMM PF00005; taurine import ATP-binding protein TauB 139626 4533525 MSMEG_0116 Mycobacterium smegmatis str. MC2 155 taurine import ATP-binding protein TauB YP_884531.1 138829 D 246196 CDS YP_884532.1 118469225 4533279 complement(139607..140287) 1 NC_008596.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01428; match to protein family HMM TIGR01493; haloacid dehalogenase 140287 dehII 4533279 dehII Mycobacterium smegmatis str. MC2 155 haloacid dehalogenase YP_884532.1 139607 R 246196 CDS YP_884533.1 118472845 4537441 complement(140284..141147) 1 NC_008596.1 identified by match to protein family HMM PF00561; hydrolase 141147 4537441 MSMEG_0117 Mycobacterium smegmatis str. MC2 155 hydrolase YP_884533.1 140284 R 246196 CDS YP_884534.1 118473955 4533901 141232..141732 1 NC_008596.1 identified by match to protein family HMM PF07336; hypothetical protein 141732 4533901 MSMEG_0118 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884534.1 141232 D 246196 CDS YP_884535.1 118471830 4536323 complement(141740..141850) 1 NC_008596.1 hypothetical protein 141850 4536323 MSMEG_0119 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884535.1 141740 R 246196 CDS YP_884536.1 118472085 4537094 141969..142628 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulatory protein 142628 4537094 MSMEG_0120 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_884536.1 141969 D 246196 CDS YP_884537.1 118469452 4534829 142625..143398 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; rhamnolipid biosynthesis 3-oxoacyl-ACP reductase 143398 4534829 MSMEG_0121 Mycobacterium smegmatis str. MC2 155 rhamnolipid biosynthesis 3-oxoacyl-ACP reductase YP_884537.1 142625 D 246196 CDS YP_884538.1 118467460 4536605 143535..144542 1 NC_008596.1 identified by match to protein family HMM PF03401; periplasmic solute-binding protein 144542 4536605 MSMEG_0122 Mycobacterium smegmatis str. MC2 155 periplasmic solute-binding protein YP_884538.1 143535 D 246196 CDS YP_884539.1 118469138 4532554 144542..145048 1 NC_008596.1 hypothetical protein 145048 4532554 MSMEG_0123 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884539.1 144542 D 246196 CDS YP_884540.1 118468057 4534172 145067..146593 1 NC_008596.1 identified by match to protein family HMM PF01970; integral membrane protein 146593 4534172 MSMEG_0125 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_884540.1 145067 D 246196 CDS YP_884541.1 118473403 4537021 complement(146549..147232) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 147232 4537021 MSMEG_0124 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_884541.1 146549 R 246196 CDS YP_884542.1 118471936 4536198 complement(147229..148347) 1 NC_008596.1 identified by match to protein family HMM PF01188; match to protein family HMM PF02746; mandelate racemase/muconate lactonizing enzyme 148347 4536198 MSMEG_0126 Mycobacterium smegmatis str. MC2 155 mandelate racemase/muconate lactonizing enzyme YP_884542.1 147229 R 246196 CDS YP_884543.1 118467830 4534581 complement(148387..149478) 1 NC_008596.1 identified by match to protein family HMM PF00107; oxidoreductase, zinc-binding dehydrogenase 149478 4534581 MSMEG_0127 Mycobacterium smegmatis str. MC2 155 oxidoreductase, zinc-binding dehydrogenase YP_884543.1 148387 R 246196 CDS YP_884544.1 118469873 4536565 149514..149963 1 NC_008596.1 identified by match to protein family HMM PF03061; thioesterase 149963 4536565 MSMEG_0128 Mycobacterium smegmatis str. MC2 155 thioesterase YP_884544.1 149514 D 246196 CDS YP_884545.1 118473269 4537699 149990..150424 1 NC_008596.1 similar to Streptomyces cyclase/dehydrase; identified by match to protein family HMM PF03364; cyclase/dehydrase 150424 4537699 MSMEG_0129 Mycobacterium smegmatis str. MC2 155 cyclase/dehydrase YP_884545.1 149990 D 246196 CDS YP_884546.1 118468175 4535047 complement(150431..151123) 1 NC_008596.1 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 151123 4535047 MSMEG_0130 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_884546.1 150431 R 246196 CDS YP_884547.1 118470372 4532319 151273..152907 1 NC_008596.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 152907 4532319 MSMEG_0131 Mycobacterium smegmatis str. MC2 155 long-chain-fatty-acid--CoA ligase YP_884547.1 151273 D 246196 CDS YP_884548.1 118469614 4531586 153100..153900 1 NC_008596.1 identified by match to protein family HMM PF02405; hypothetical protein 153900 4531586 MSMEG_0132 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884548.1 153100 D 246196 CDS YP_884549.1 118471402 4534877 153902..154771 1 NC_008596.1 identified by match to protein family HMM PF02405; ABC transporter 154771 4534877 MSMEG_0133 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_884549.1 153902 D 246196 CDS YP_884550.1 118472305 4532777 154776..156005 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 156005 4532777 MSMEG_0134 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_884550.1 154776 D 246196 CDS YP_884551.1 118468987 4535097 156002..157033 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 157033 4535097 MSMEG_0135 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_884551.1 156002 D 246196 CDS YP_884552.1 118473407 4537025 157030..158604 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 158604 4537025 MSMEG_0136 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_884552.1 157030 D 246196 CDS YP_884553.1 118471615 4536528 158623..160266 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor mce family protein 160266 4536528 MSMEG_0137 Mycobacterium smegmatis str. MC2 155 virulence factor mce family protein YP_884553.1 158623 D 246196 CDS YP_884554.1 118472695 4531663 160266..161438 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 161438 4531663 MSMEG_0138 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_884554.1 160266 D 246196 CDS YP_884555.1 118473635 4531031 161440..162996 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; mce-family protein mce1f 162996 4531031 MSMEG_0139 Mycobacterium smegmatis str. MC2 155 mce-family protein mce1f YP_884555.1 161440 D 246196 CDS YP_884556.1 118473174 4532576 162966..163574 1 NC_008596.1 mce associated membrane protein 163574 4532576 MSMEG_0140 Mycobacterium smegmatis str. MC2 155 mce associated membrane protein YP_884556.1 162966 D 246196 CDS YP_884557.1 118468353 4533952 163571..164539 1 NC_008596.1 identified by match to protein family HMM PF06271; mce associated transmembrane protein 164539 4533952 MSMEG_0141 Mycobacterium smegmatis str. MC2 155 mce associated transmembrane protein YP_884557.1 163571 D 246196 CDS YP_884558.1 118467389 4533860 164536..165084 1 NC_008596.1 hypothetical protein 165084 4533860 MSMEG_0142 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884558.1 164536 D 246196 CDS YP_884559.1 118472957 4532295 165051..165941 1 NC_008596.1 mce associated membrane protein 165941 4532295 MSMEG_0143 Mycobacterium smegmatis str. MC2 155 mce associated membrane protein YP_884559.1 165051 D 246196 CDS YP_884560.1 118473651 4533519 165944..166612 1 NC_008596.1 identified by match to protein family HMM PF06912; hypothetical protein 166612 4533519 MSMEG_0145 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884560.1 165944 D 246196 CDS YP_884561.1 118472249 4531558 complement(166609..168477) 1 NC_008596.1 identified by match to protein family HMM PF01844; match to protein family HMM PF02720; HNH endonuclease 168477 4531558 MSMEG_0144 Mycobacterium smegmatis str. MC2 155 HNH endonuclease YP_884561.1 166609 R 246196 CDS YP_884562.1 118472589 4534370 complement(168543..169361) 1 NC_008596.1 identified by match to protein family HMM PF03473; mosc domain-containing protein 169361 4534370 MSMEG_0146 Mycobacterium smegmatis str. MC2 155 mosc domain-containing protein YP_884562.1 168543 R 246196 CDS YP_884563.1 118467841 4535468 complement(169419..170333) 1 NC_008596.1 C-5 sterol desaturase 170333 4535468 MSMEG_0147 Mycobacterium smegmatis str. MC2 155 C-5 sterol desaturase YP_884563.1 169419 R 246196 CDS YP_884564.1 118468941 4537475 complement(170367..170996) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 170996 4537475 MSMEG_0148 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_884564.1 170367 R 246196 CDS YP_884565.1 118470952 4533688 complement(171077..172504) 1 NC_008596.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 172504 4533688 MSMEG_0149 Mycobacterium smegmatis str. MC2 155 thiamine biosynthesis protein ThiC YP_884565.1 171077 R 246196 CDS YP_884566.1 118470393 4533454 complement(172501..173934) 1 NC_008596.1 identified by match to protein family HMM PF02233; NAD(P) transhydrogenase subunit beta 173934 4533454 MSMEG_0150 Mycobacterium smegmatis str. MC2 155 NAD(P) transhydrogenase subunit beta YP_884566.1 172501 R 246196 CDS YP_884567.1 118471935 4536197 complement(173931..174254) 1 NC_008596.1 PntAB protein 174254 4536197 MSMEG_0151 Mycobacterium smegmatis str. MC2 155 PntAB protein YP_884567.1 173931 R 246196 CDS YP_884568.1 118469165 4534751 complement(174258..175340) 1 NC_008596.1 identified by match to protein family HMM PF01262; match to protein family HMM PF05222; alanine dehydrogenase 175340 4534751 MSMEG_0152 Mycobacterium smegmatis str. MC2 155 alanine dehydrogenase YP_884568.1 174258 R 246196 CDS YP_884569.1 118472907 4533776 175555..176568 1 NC_008596.1 Ketopantoate reductase; catalyzes the NADPH reduction of Ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 176568 panE 4533776 panE Mycobacterium smegmatis str. MC2 155 2-dehydropantoate 2-reductase YP_884569.1 175555 D 246196 CDS YP_884570.1 118467787 4535708 176579..178012 1 NC_008596.1 identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase 178012 pyk 4535708 pyk Mycobacterium smegmatis str. MC2 155 pyruvate kinase YP_884570.1 176579 D 246196 CDS YP_884571.1 118472146 4532483 complement(178054..178524) 1 NC_008596.1 identified by match to protein family HMM PF00989; match to protein family HMM TIGR00229; transcriptional regulator 178524 4532483 MSMEG_0155 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_884571.1 178054 R 246196 CDS YP_884572.1 118472402 4531812 178631..179557 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 179557 4531812 MSMEG_0156 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_884572.1 178631 D 246196 CDS YP_884573.1 118472408 4531329 179717..181450 1 NC_008596.1 catalyzes the formation of formyl-CoA from oxalyl-CoA; oxalyl-CoA decarboxylase 181450 4531329 MSMEG_0157 Mycobacterium smegmatis str. MC2 155 oxalyl-CoA decarboxylase YP_884573.1 179717 D 246196 CDS YP_884574.1 118467789 4535711 181519..182781 1 NC_008596.1 catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA; formyl-coenzyme A transferase 182781 4535711 MSMEG_0158 Mycobacterium smegmatis str. MC2 155 formyl-coenzyme A transferase YP_884574.1 181519 D 246196 CDS YP_884575.1 118473363 4530839 182884..183369 1 NC_008596.1 identified by similarity to GB:CAA11233.1; match to protein family HMM PF01257; formate dehydrogenase subunit gamma 183369 4530839 MSMEG_0159 Mycobacterium smegmatis str. MC2 155 formate dehydrogenase subunit gamma YP_884575.1 182884 D 246196 CDS YP_884576.1 118472465 4533831 183366..184964 1 NC_008596.1 identified by similarity to GB:CAA11234.1; match to protein family HMM PF01512; formate dehydrogenase subunit beta 184964 4533831 MSMEG_0160 Mycobacterium smegmatis str. MC2 155 formate dehydrogenase subunit beta YP_884576.1 183366 D 246196 CDS YP_884577.1 118470937 4533672 184961..187780 1 NC_008596.1 identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01591; formate dehydrogenase subunit alpha 187780 4533672 MSMEG_0161 Mycobacterium smegmatis str. MC2 155 formate dehydrogenase subunit alpha YP_884577.1 184961 D 246196 CDS YP_884578.1 118467550 4535503 187782..188006 1 NC_008596.1 NAD-dependent formate dehydrogenase subunit delta 188006 4535503 MSMEG_0162 Mycobacterium smegmatis str. MC2 155 NAD-dependent formate dehydrogenase subunit delta YP_884578.1 187782 D 246196 CDS YP_884579.1 118471161 4530951 complement(188070..188381) 1 NC_008596.1 hypothetical protein 188381 4530951 MSMEG_0163 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884579.1 188070 R 246196 CDS YP_884580.1 118470014 4532752 complement(188427..189770) 1 NC_008596.1 identified by match to protein family HMM PF07690; transmembrane transporter 189770 4532752 MSMEG_0164 Mycobacterium smegmatis str. MC2 155 transmembrane transporter YP_884580.1 188427 R 246196 CDS YP_884581.1 118471883 4536259 189944..190786 1 NC_008596.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 190786 fdhD 4536259 fdhD Mycobacterium smegmatis str. MC2 155 formate dehydrogenase accessory protein YP_884581.1 189944 D 246196 CDS YP_884582.1 118470906 4537580 complement(190817..191545) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 191545 4537580 MSMEG_0166 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_884582.1 190817 R 246196 CDS YP_884583.1 118473569 4531003 complement(191746..193149) 1 NC_008596.1 identified by match to protein family HMM PF07690; transmembrane transporter 193149 4531003 MSMEG_0167 Mycobacterium smegmatis str. MC2 155 transmembrane transporter YP_884583.1 191746 R 246196 CDS YP_884584.1 118467942 4533422 193685..194971 1 NC_008596.1 catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA; formyl-coenzyme A transferase 194971 4533422 MSMEG_0168 Mycobacterium smegmatis str. MC2 155 formyl-coenzyme A transferase YP_884584.1 193685 D 246196 CDS YP_884585.1 118471951 4536175 complement(195087..195203) 1 NC_008596.1 hypothetical protein 195203 4536175 MSMEG_0169 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884585.1 195087 R 246196 CDS YP_884586.1 118467976 4535158 195185..196567 1 NC_008596.1 identified by match to protein family HMM PF07690; transmembrane transporter 196567 4535158 MSMEG_0170 Mycobacterium smegmatis str. MC2 155 transmembrane transporter YP_884586.1 195185 D 246196 CDS YP_884587.1 118472445 4533586 196658..197587 1 NC_008596.1 identified by match to protein family HMM PF00850; histone deacetylase superfamily protein 197587 4533586 MSMEG_0171 Mycobacterium smegmatis str. MC2 155 histone deacetylase superfamily protein YP_884587.1 196658 D 246196 CDS YP_884588.1 118468561 4533695 complement(197588..198190) 1 NC_008596.1 transmembrane protein 198190 4533695 MSMEG_0172 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_884588.1 197588 R 246196 CDS YP_884589.1 118468839 4535416 complement(198371..198691) 1 NC_008596.1 hypothetical protein 198691 4535416 MSMEG_0173 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884589.1 198371 R 246196 CDS YP_884590.1 118469982 4535756 complement(198688..199059) 1 NC_008596.1 identified by match to protein family HMM PF02656; inner membrane protein 199059 4535756 MSMEG_0174 Mycobacterium smegmatis str. MC2 155 inner membrane protein YP_884590.1 198688 R 246196 CDS YP_884591.1 118470473 4536782 199157..200293 1 NC_008596.1 identified by match to protein family HMM PF01266; FAD dependent oxidoreductase 200293 4536782 MSMEG_0175 Mycobacterium smegmatis str. MC2 155 FAD dependent oxidoreductase YP_884591.1 199157 D 246196 CDS YP_884592.1 118467346 4534705 200304..201158 1 NC_008596.1 identified by match to protein family HMM PF00497; glutamine ABC transporter periplasmic protein 201158 4534705 MSMEG_0176 Mycobacterium smegmatis str. MC2 155 glutamine ABC transporter periplasmic protein YP_884592.1 200304 D 246196 CDS YP_884593.1 118473378 4536623 201116..202087 1 NC_008596.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; polar amino acid ABC transporter inner membrane protein 202087 4536623 MSMEG_0177 Mycobacterium smegmatis str. MC2 155 polar amino acid ABC transporter inner membrane protein YP_884593.1 201116 D 246196 CDS YP_884594.1 118468308 4533066 202084..202866 1 NC_008596.1 identified by match to protein family HMM PF00005; ATP-binding protein 202866 4533066 MSMEG_0178 Mycobacterium smegmatis str. MC2 155 ATP-binding protein YP_884594.1 202084 D 246196 CDS YP_884595.1 118473586 4534859 complement(202876..203547) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 203547 4534859 MSMEG_0179 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_884595.1 202876 R 246196 CDS YP_884596.1 118469617 4531589 complement(203664..204173) 1 NC_008596.1 identified by match to protein family HMM PF00440; HTH-type transcriptional regulator 204173 4531589 MSMEG_0180 Mycobacterium smegmatis str. MC2 155 HTH-type transcriptional regulator YP_884596.1 203664 R 246196 CDS YP_884597.1 118470370 4532317 204225..205163 1 NC_008596.1 identified by match to protein family HMM PF02668; alpha-ketoglutarate-dependent taurine dioxygenase 205163 4532317 MSMEG_0181 Mycobacterium smegmatis str. MC2 155 alpha-ketoglutarate-dependent taurine dioxygenase YP_884597.1 204225 D 246196 CDS YP_884598.1 118470639 4532398 205190..206347 1 NC_008596.1 identified by match to protein family HMM PF00561; match to protein family HMM PF06441; epoxide hydrolase 1 206347 4532398 MSMEG_0182 Mycobacterium smegmatis str. MC2 155 epoxide hydrolase 1 YP_884598.1 205190 D 246196 CDS YP_884599.1 118468010 4533091 206362..208134 1 NC_008596.1 identified by match to protein family HMM PF01019; transferase 208134 4533091 MSMEG_0184 Mycobacterium smegmatis str. MC2 155 transferase YP_884599.1 206362 D 246196 CDS YP_884600.1 118468853 4535626 complement(208033..208584) 1 NC_008596.1 hypothetical protein 208584 4535626 MSMEG_0183 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884600.1 208033 R 246196 CDS YP_884601.1 118471067 4537140 complement(208581..211442) 1 NC_008596.1 identified by match to protein family HMM PF03176; MmpL6 protein 211442 4537140 MSMEG_0185 Mycobacterium smegmatis str. MC2 155 MmpL6 protein YP_884601.1 208581 R 246196 CDS YP_884602.1 118471989 4536136 complement(211421..211915) 1 NC_008596.1 identified by match to protein family HMM PF05423; MmpS2 protein 211915 4536136 MSMEG_0186 Mycobacterium smegmatis str. MC2 155 MmpS2 protein YP_884602.1 211421 R 246196 CDS YP_884603.1 118469896 4533215 212103..212558 1 NC_008596.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 212558 4533215 MSMEG_0188 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_884603.1 212103 D 246196 CDS YP_884604.1 118468385 4534774 complement(212548..213024) 1 NC_008596.1 identified by match to protein family HMM PF00583; acetyltransferase 213024 4534774 MSMEG_0187 Mycobacterium smegmatis str. MC2 155 acetyltransferase YP_884604.1 212548 R 246196 CDS YP_884605.1 118467421 4536037 complement(212999..214165) 1 NC_008596.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 214165 anmK 4536037 anmK Mycobacterium smegmatis str. MC2 155 anhydro-N-acetylmuramic acid kinase YP_884605.1 212999 R 246196 CDS YP_884606.1 118472694 4531662 complement(214183..215742) 1 NC_008596.1 identified by match to protein family HMM PF00474; integral membrane transporter 215742 4531662 MSMEG_0190 Mycobacterium smegmatis str. MC2 155 integral membrane transporter YP_884606.1 214183 R 246196 CDS YP_884607.1 118473541 4533641 complement(215751..216680) 1 NC_008596.1 identified by match to protein family HMM PF01869; BadF/BadG/BcrA/BcrD ATPase 216680 4533641 MSMEG_0191 Mycobacterium smegmatis str. MC2 155 BadF/BadG/BcrA/BcrD ATPase YP_884607.1 215751 R 246196 CDS YP_884608.1 118473395 4537013 216912..217814 1 NC_008596.1 identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family transcriptional regulator protein 217814 4537013 MSMEG_0192 Mycobacterium smegmatis str. MC2 155 RpiR family transcriptional regulator protein YP_884608.1 216912 D 246196 CDS YP_884609.1 118472501 4533731 217828..218724 1 NC_008596.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 218724 murQ 4533731 murQ Mycobacterium smegmatis str. MC2 155 N-acetylmuramic acid 6-phosphate etherase YP_884609.1 217828 D 246196 CDS YP_884610.1 118470941 4533676 complement(218725..219423) 1 NC_008596.1 identified by match to protein family HMM PF01083; serine esterase, cutinase 219423 4533676 MSMEG_0194 Mycobacterium smegmatis str. MC2 155 serine esterase, cutinase YP_884610.1 218725 R 246196 CDS YP_884611.1 118468167 4535039 219598..221238 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF07992; steroid monooxygenase 221238 4535039 MSMEG_0195 Mycobacterium smegmatis str. MC2 155 steroid monooxygenase YP_884611.1 219598 D 246196 CDS YP_884612.1 118473426 4537413 221243..222139 1 NC_008596.1 identified by match to protein family HMM PF00296; dehydrogenase 222139 4537413 MSMEG_0196 Mycobacterium smegmatis str. MC2 155 dehydrogenase YP_884612.1 221243 D 246196 CDS YP_884613.1 118472734 4532363 complement(222149..222793) 1 NC_008596.1 identified by match to protein family HMM PF00293; nudix hydrolase 222793 4532363 MSMEG_0197 Mycobacterium smegmatis str. MC2 155 nudix hydrolase YP_884613.1 222149 R 246196 CDS YP_884614.1 118468858 4535631 complement(222803..223936) 1 NC_008596.1 identified by match to protein family HMM PF08028; acyl-CoA dehydrogenase 223936 4535631 MSMEG_0198 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_884614.1 222803 R 246196 CDS YP_884615.1 118473989 4531433 225160..227712 1 NC_008596.1 hypothetical protein 227712 4531433 MSMEG_0200 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884615.1 225160 D 246196 CDS YP_884616.1 118470989 4531909 complement(227725..228231) 1 NC_008596.1 hypothetical protein 228231 4531909 MSMEG_0201 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884616.1 227725 R 246196 CDS YP_884617.1 118471364 4535271 227950..229272 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 229272 4535271 MSMEG_0202 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_884617.1 227950 D 246196 CDS YP_884618.1 118469195 4535784 complement(229280..229981) 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 229981 4535784 MSMEG_0203 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_884618.1 229280 R 246196 CDS YP_884619.1 118470591 4531378 230210..232255 1 NC_008596.1 hypothetical protein 232255 4531378 MSMEG_0204 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884619.1 230210 D 246196 CDS YP_884620.1 118468725 4532795 complement(232344..232667) 1 NC_008596.1 identified by match to protein family HMM PF03992; tetracenomycin polyketide synthesis hydroxylase TcmH 232667 4532795 MSMEG_0205 Mycobacterium smegmatis str. MC2 155 tetracenomycin polyketide synthesis hydroxylase TcmH YP_884620.1 232344 R 246196 CDS YP_884621.1 118471008 4533501 232728..233168 1 NC_008596.1 identified by match to protein family HMM PF01047; match to protein family HMM PF01978; MarR family transcriptional regulator 233168 4533501 MSMEG_0207 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_884621.1 232728 D 246196 CDS YP_884622.1 118470113 4534948 complement(233161..235296) 1 NC_008596.1 identified by match to protein family HMM PF01757; acyltransferase 235296 4534948 MSMEG_0206 Mycobacterium smegmatis str. MC2 155 acyltransferase YP_884622.1 233161 R 246196 CDS YP_884623.1 118469189 4535778 235408..235785 1 NC_008596.1 identified by match to protein family HMM PF00545; ribonuclease 235785 4535778 MSMEG_0208 Mycobacterium smegmatis str. MC2 155 ribonuclease YP_884623.1 235408 D 246196 CDS YP_884624.1 118469418 4534314 235782..236060 1 NC_008596.1 ribonuclease inhibitor 236060 4534314 MSMEG_0209 Mycobacterium smegmatis str. MC2 155 ribonuclease inhibitor YP_884624.1 235782 D 246196 CDS YP_884625.1 118468192 4534406 complement(236061..237149) 1 NC_008596.1 LprO protein 237149 4534406 MSMEG_0210 Mycobacterium smegmatis str. MC2 155 LprO protein YP_884625.1 236061 R 246196 CDS YP_884626.1 118472204 4530862 complement(237244..239607) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 239607 4530862 MSMEG_0211 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_884626.1 237244 R 246196 CDS YP_884627.1 118472975 4532255 complement(239607..240026) 1 NC_008596.1 identified by match to protein family HMM PF00903; lyase 240026 4532255 MSMEG_0212 Mycobacterium smegmatis str. MC2 155 lyase YP_884627.1 239607 R 246196 CDS YP_884628.1 118472972 4532311 complement(240031..240471) 1 NC_008596.1 identified by match to protein family HMM PF00165; transcriptional regulator 240471 4532311 MSMEG_0213 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_884628.1 240031 R 246196 CDS YP_884629.1 118473205 4531055 complement(240488..241771) 1 NC_008596.1 L-sorbosone dehydrogenase 241771 4531055 MSMEG_0214 Mycobacterium smegmatis str. MC2 155 L-sorbosone dehydrogenase YP_884629.1 240488 R 246196 CDS YP_884630.1 118468234 4537419 complement(241749..242465) 1 NC_008596.1 identified by match to protein family HMM PF02678; hypothetical protein 242465 4537419 MSMEG_0215 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884630.1 241749 R 246196 CDS YP_884631.1 118473192 4533309 242603..243397 1 NC_008596.1 identified by match to protein family HMM PF00106; 3-hydroxyacyl-CoA dehydrogenase 243397 4533309 MSMEG_0216 Mycobacterium smegmatis str. MC2 155 3-hydroxyacyl-CoA dehydrogenase YP_884631.1 242603 D 246196 CDS YP_884632.1 118467401 4535822 complement(243477..244601) 1 NC_008596.1 identified by match to protein family HMM PF00107; alcohol dehydrogenase 244601 4535822 MSMEG_0217 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_884632.1 243477 R 246196 CDS YP_884633.1 118472089 4537098 244773..245267 1 NC_008596.1 identified by match to protein family HMM PF06983; 3-demethylubiquinone-9 3-methyltransferase 245267 4537098 MSMEG_0218 Mycobacterium smegmatis str. MC2 155 3-demethylubiquinone-9 3-methyltransferase YP_884633.1 244773 D 246196 CDS YP_884634.1 118473080 4533155 complement(245271..246293) 1 NC_008596.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 246293 4533155 MSMEG_0219 Mycobacterium smegmatis str. MC2 155 RNA polymerase factor sigma-70 YP_884634.1 245271 R 246196 CDS YP_884635.1 118472240 4532461 246357..247199 1 NC_008596.1 identified by match to protein family HMM PF00561; monoglyceride lipase 247199 4532461 MSMEG_0220 Mycobacterium smegmatis str. MC2 155 monoglyceride lipase YP_884635.1 246357 D 246196 CDS YP_884636.1 118472570 4534154 247214..248173 1 NC_008596.1 hypothetical protein 248173 4534154 MSMEG_0221 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884636.1 247214 D 246196 CDS YP_884637.1 118470922 4533970 248214..248957 1 NC_008596.1 hypothetical protein 248957 4533970 MSMEG_0222 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884637.1 248214 D 246196 CDS YP_884638.1 118471118 4533477 248954..249436 1 NC_008596.1 hypothetical protein 249436 4533477 MSMEG_0223 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884638.1 248954 D 246196 CDS YP_884639.1 118469290 4532629 249456..250112 1 NC_008596.1 identified by match to protein family HMM PF01135; match to protein family HMM PF01596; O-methyltransferase MdmC 250112 4532629 MSMEG_0224 Mycobacterium smegmatis str. MC2 155 O-methyltransferase MdmC YP_884639.1 249456 D 246196 CDS YP_884640.1 118467493 4537380 complement(250120..253017) 1 NC_008596.1 identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; MmpL4 protein 253017 4537380 MSMEG_0225 Mycobacterium smegmatis str. MC2 155 MmpL4 protein YP_884640.1 250120 R 246196 CDS YP_884641.1 118471113 4533472 complement(253014..253442) 1 NC_008596.1 identified by match to protein family HMM PF05423; MmpS5 protein 253442 4533472 MSMEG_0226 Mycobacterium smegmatis str. MC2 155 MmpS5 protein YP_884641.1 253014 R 246196 CDS YP_884642.1 118473693 4531090 253688..254257 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 254257 4531090 MSMEG_0227 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_884642.1 253688 D 246196 CDS YP_884643.1 118468375 4532924 254330..257482 1 NC_008596.1 identified by match to protein family HMM PF00211; adenylate and guanylate cyclase catalytic domain-containing protein 257482 4532924 MSMEG_0228 Mycobacterium smegmatis str. MC2 155 adenylate and guanylate cyclase catalytic domain-containing protein YP_884643.1 254330 D 246196 CDS YP_884644.1 118471241 4534428 complement(257573..259288) 1 NC_008596.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 259288 ilvD 4534428 ilvD Mycobacterium smegmatis str. MC2 155 dihydroxy-acid dehydratase YP_884644.1 257573 R 246196 CDS YP_884645.1 118467640 4534215 259367..259672 1 NC_008596.1 identified by match to protein family HMM PF02583; hypothetical protein 259672 4534215 MSMEG_0230 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884645.1 259367 D 246196 CDS YP_884646.1 118471972 4536158 complement(259691..259990) 1 NC_008596.1 identified by match to protein family HMM PF01910; match to protein family HMM TIGR00106; hypothetical protein 259990 4536158 MSMEG_0231 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884646.1 259691 R 246196 CDS YP_884647.1 118469230 4535366 260053..261282 1 NC_008596.1 identified by match to protein family HMM PF07690; sugar transporter family protein 261282 4535366 MSMEG_0232 Mycobacterium smegmatis str. MC2 155 sugar transporter family protein YP_884647.1 260053 D 246196 CDS YP_884648.1 118473851 4533551 261440..262480 1 NC_008596.1 identified by match to protein family HMM PF03734; lipoprotein Lpps 262480 4533551 MSMEG_0233 Mycobacterium smegmatis str. MC2 155 lipoprotein Lpps YP_884648.1 261440 D 246196 CDS YP_884649.1 118467687 4537325 complement(262543..264543) 1 NC_008596.1 identified by match to protein family HMM PF01431; match to protein family HMM PF05649; metallopeptidase 264543 4537325 MSMEG_0234 Mycobacterium smegmatis str. MC2 155 metallopeptidase YP_884649.1 262543 R 246196 CDS YP_884650.1 118468337 4532088 264607..265227 1 NC_008596.1 hypothetical protein 265227 4532088 MSMEG_0235 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884650.1 264607 D 246196 CDS YP_884651.1 118472229 4532450 265224..265913 1 NC_008596.1 transmembrane protein 265913 4532450 MSMEG_0236 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_884651.1 265224 D 246196 CDS YP_884652.1 118471015 4534471 266047..267453 1 NC_008596.1 identified by similarity to GP:4838457; match to protein family HMM PF01609; ISMsm3, transposase 267453 4534471 MSMEG_0237 Mycobacterium smegmatis str. MC2 155 ISMsm3, transposase YP_884652.1 266047 D 246196 CDS YP_884653.1 118469974 4535748 complement(267632..268102) 1 NC_008596.1 identified by match to protein family HMM PF02629; O-acetylhomoserine/O-acetylserine sulfhydrylase 268102 4535748 MSMEG_0238 Mycobacterium smegmatis str. MC2 155 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_884653.1 267632 R 246196 CDS YP_884654.1 118473884 4536579 complement(268095..269390) 1 NC_008596.1 identified by match to protein family HMM PF01053; match to protein family HMM TIGR01326; O-acetylhomoserine/O-acetylserine sulfhydrylase 269390 4536579 MSMEG_0239 Mycobacterium smegmatis str. MC2 155 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_884654.1 268095 R 246196 CDS YP_884655.1 118473090 4531151 complement(269466..270074) 1 NC_008596.1 hypothetical protein 270074 4531151 MSMEG_0240 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884655.1 269466 R 246196 CDS YP_884656.1 118469722 4537596 complement(270077..272941) 1 NC_008596.1 identified by match to protein family HMM PF03176; MmpL11 protein 272941 4537596 MSMEG_0241 Mycobacterium smegmatis str. MC2 155 MmpL11 protein YP_884656.1 270077 R 246196 CDS YP_884657.1 118471449 4535124 273263..273844 1 NC_008596.1 hypothetical protein 273844 4535124 MSMEG_0242 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884657.1 273263 D 246196 CDS YP_884658.1 118469909 4535563 274044..274394 1 NC_008596.1 hypothetical protein 274394 4535563 MSMEG_0243 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884658.1 274044 D 246196 CDS YP_884659.1 118470690 4531753 274400..275140 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; two component response transcriptional regulatory protein prra 275140 4531753 MSMEG_0244 Mycobacterium smegmatis str. MC2 155 two component response transcriptional regulatory protein prra YP_884659.1 274400 D 246196 CDS YP_884660.1 118471864 4536279 275161..276513 1 NC_008596.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor-type histidine kinase PrrB 276513 4536279 MSMEG_0246 Mycobacterium smegmatis str. MC2 155 sensor-type histidine kinase PrrB YP_884660.1 275161 D 246196 CDS YP_884661.1 118467522 4535533 complement(276501..276869) 1 NC_008596.1 transmembrane protein 276869 4535533 MSMEG_0245 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_884661.1 276501 R 246196 CDS YP_884662.1 118468955 4532618 complement(276856..278070) 1 NC_008596.1 identified by match to protein family HMM PF01551; secreted peptidase 278070 4532618 MSMEG_0247 Mycobacterium smegmatis str. MC2 155 secreted peptidase YP_884662.1 276856 R 246196 CDS YP_884663.1 118469523 4536727 complement(278070..279161) 1 NC_008596.1 identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374; hypothetical protein 279161 4536727 MSMEG_0248 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884663.1 278070 R 246196 CDS YP_884664.1 118471020 4534476 279235..280374 1 NC_008596.1 identified by match to protein family HMM PF01594; integral membrane protein 280374 4534476 MSMEG_0249 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_884664.1 279235 D 246196 CDS YP_884665.1 118472473 4533839 complement(280382..283423) 1 NC_008596.1 membrane protein, MmpL family protein 283423 4533839 MSMEG_0250 Mycobacterium smegmatis str. MC2 155 membrane protein, MmpL family protein YP_884665.1 280382 R 246196 CDS YP_884666.1 118468859 4535632 complement(283518..284216) 1 NC_008596.1 hypothetical protein 284216 4535632 MSMEG_0251 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884666.1 283518 R 246196 CDS YP_884667.1 118470320 4535198 complement(284219..284941) 1 NC_008596.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 284941 trmB 4535198 trmB Mycobacterium smegmatis str. MC2 155 tRNA (guanine-N(7)-)-methyltransferase YP_884667.1 284219 R 246196 CDS YP_884668.1 118467866 4532888 285164..286186 1 NC_008596.1 hypothetical protein 286186 4532888 MSMEG_0253 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884668.1 285164 D 246196 CDS YP_884669.1 118470371 4532318 286183..287649 1 NC_008596.1 hypothetical protein 287649 4532318 MSMEG_0254 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884669.1 286183 D 246196 CDS YP_884670.1 118472266 4531575 287807..289633 1 NC_008596.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 289633 4531575 MSMEG_0255 Mycobacterium smegmatis str. MC2 155 phosphoenolpyruvate carboxykinase YP_884670.1 287807 D 246196 CDS YP_884671.1 118468379 4532928 289749..290651 1 NC_008596.1 hypothetical protein 290651 4532928 MSMEG_0256 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884671.1 289749 D 246196 CDS YP_884672.1 118469180 4534287 290685..292199 1 NC_008596.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 292199 4534287 MSMEG_0257 Mycobacterium smegmatis str. MC2 155 long-chain-fatty-acid--CoA ligase YP_884672.1 290685 D 246196 CDS YP_884673.1 118470830 4532516 292201..293106 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 293106 4532516 MSMEG_0259 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase/isomerase YP_884673.1 292201 D 246196 CDS YP_884674.1 118472222 4531472 complement(293084..293794) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; oxidoreductase, short chain dehydrogenase/reductase 293794 4531472 MSMEG_0258 Mycobacterium smegmatis str. MC2 155 oxidoreductase, short chain dehydrogenase/reductase YP_884674.1 293084 R 246196 CDS YP_884675.1 118469340 4535930 293906..294721 1 NC_008596.1 DNA-binding protein 294721 4535930 MSMEG_0260 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_884675.1 293906 D 246196 CDS YP_884676.1 118473109 4531835 294737..295729 1 NC_008596.1 p40 protein 295729 4531835 MSMEG_0261 Mycobacterium smegmatis str. MC2 155 p40 protein YP_884676.1 294737 D 246196 CDS YP_884677.1 118468075 4533022 295766..296872 1 NC_008596.1 hypothetical protein 296872 4533022 MSMEG_0262 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884677.1 295766 D 246196 CDS YP_884678.1 118468530 4535355 296866..298137 1 NC_008596.1 identified by match to protein family HMM PF07969; amidohydrolase 298137 4535355 MSMEG_0263 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_884678.1 296866 D 246196 CDS YP_884679.1 118470683 4531746 298158..299276 1 NC_008596.1 identified by match to protein family HMM PF07690; transmembrane transporter 299276 4531746 MSMEG_0264 Mycobacterium smegmatis str. MC2 155 transmembrane transporter YP_884679.1 298158 D 246196 CDS YP_884680.1 118472909 4533778 299314..300771 1 NC_008596.1 identified by match to protein family HMM PF01276; match to protein family HMM PF03711; arginine decarboxylase 300771 4533778 MSMEG_0266 Mycobacterium smegmatis str. MC2 155 arginine decarboxylase YP_884680.1 299314 D 246196 CDS YP_884681.1 118473024 4532345 complement(300761..301390) 1 NC_008596.1 identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758; uracil DNA glycosylase superfamily protein 301390 4532345 MSMEG_0265 Mycobacterium smegmatis str. MC2 155 uracil DNA glycosylase superfamily protein YP_884681.1 300761 R 246196 CDS YP_884682.1 118472930 4531219 301478..302494 1 NC_008596.1 identified by match to protein family HMM PF07859; esterase 302494 4531219 MSMEG_0267 Mycobacterium smegmatis str. MC2 155 esterase YP_884682.1 301478 D 246196 CDS YP_884683.1 118472184 4533722 complement(302495..303274) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF02082; match to protein family HMM PF07702; GntR family transcriptional regulator 303274 4533722 MSMEG_0268 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_884683.1 302495 R 246196 CDS YP_884684.1 118469255 4531547 complement(303324..304103) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase 304103 4531547 MSMEG_0269 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_884684.1 303324 R 246196 CDS YP_884685.1 118467539 4536001 complement(304140..305144) 1 NC_008596.1 identified by match to protein family HMM PF01636; aminoglycoside phosphotransferase 305144 4536001 MSMEG_0270 Mycobacterium smegmatis str. MC2 155 aminoglycoside phosphotransferase YP_884685.1 304140 R 246196 CDS YP_884686.1 118472983 4532263 complement(305144..305800) 1 NC_008596.1 hypothetical protein 305800 4532263 MSMEG_0271 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884686.1 305144 R 246196 CDS YP_884687.1 118472671 4532935 complement(305803..306084) 1 NC_008596.1 identified by match to protein family HMM PF00936; propanediol utilization protein PduA 306084 4532935 MSMEG_0272 Mycobacterium smegmatis str. MC2 155 propanediol utilization protein PduA YP_884687.1 305803 R 246196 CDS YP_884688.1 118467656 4535004 complement(306097..306360) 1 NC_008596.1 identified by match to protein family HMM PF03319; ethanolamine utilization protein EutN 306360 4535004 MSMEG_0273 Mycobacterium smegmatis str. MC2 155 ethanolamine utilization protein EutN YP_884688.1 306097 R 246196 CDS YP_884689.1 118469575 4531449 complement(306377..306898) 1 NC_008596.1 hypothetical protein 306898 4531449 MSMEG_0274 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884689.1 306377 R 246196 CDS YP_884690.1 118470509 4537562 complement(306901..307509) 1 NC_008596.1 identified by match to protein family HMM PF00936; microcompartments protein family protein 307509 4537562 MSMEG_0275 Mycobacterium smegmatis str. MC2 155 microcompartments protein family protein YP_884690.1 306901 R 246196 CDS YP_884691.1 118472790 4533133 complement(307518..309101) 1 NC_008596.1 identified by match to protein family HMM PF00171; aldehyde-alcohol dehydrogenase 309101 4533133 MSMEG_0276 Mycobacterium smegmatis str. MC2 155 aldehyde-alcohol dehydrogenase YP_884691.1 307518 R 246196 CDS YP_884692.1 118470490 4537174 complement(309098..310378) 1 NC_008596.1 identified by match to protein family HMM PF00202; aminotransferase 310378 4537174 MSMEG_0277 Mycobacterium smegmatis str. MC2 155 aminotransferase YP_884692.1 309098 R 246196 CDS YP_884693.1 118470607 4532110 310563..312098 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 312098 4532110 MSMEG_0279 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_884693.1 310563 D 246196 CDS YP_884694.1 118473039 4533192 complement(312095..312322) 1 NC_008596.1 hypothetical protein 312322 4533192 MSMEG_0278 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884694.1 312095 R 246196 CDS YP_884695.1 118473630 4531026 complement(312359..313258) 1 NC_008596.1 identified by match to protein family HMM PF07859; alpha/beta hydrolase 313258 4531026 MSMEG_0280 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_884695.1 312359 R 246196 CDS YP_884696.1 118473552 4532422 313349..314920 1 NC_008596.1 identified by match to protein family HMM PF00732; match to protein family HMM PF05199; choline dehydrogenase 314920 4532422 MSMEG_0281 Mycobacterium smegmatis str. MC2 155 choline dehydrogenase YP_884696.1 313349 D 246196 CDS YP_884697.1 118471507 4536846 314913..315233 1 NC_008596.1 identified by match to protein family HMM PF07110; match to protein family HMM TIGR02118; hypothetical protein 315233 4536846 MSMEG_0282 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884697.1 314913 D 246196 CDS YP_884698.1 118470968 4534540 315285..316055 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 316055 4534540 MSMEG_0283 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_884698.1 315285 D 246196 CDS YP_884699.1 118468543 4536095 complement(316060..316854) 1 NC_008596.1 identified by match to protein family HMM PF02525; ribosyldihydronicotinamide dehydrogenase 316854 4536095 MSMEG_0284 Mycobacterium smegmatis str. MC2 155 ribosyldihydronicotinamide dehydrogenase YP_884699.1 316060 R 246196 CDS YP_884700.1 118469008 4536059 complement(316851..317453) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 317453 4536059 MSMEG_0285 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_884700.1 316851 R 246196 CDS YP_884701.1 118469565 4537511 complement(317634..318320) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07702; GntR family transcriptional regulator 318320 4537511 MSMEG_0286 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_884701.1 317634 R 246196 CDS YP_884702.1 118474043 4531724 complement(318317..318844) 1 NC_008596.1 hypothetical protein 318844 4531724 MSMEG_0287 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884702.1 318317 R 246196 CDS YP_884703.1 118471863 4536278 318960..320069 1 NC_008596.1 identified by match to protein family HMM PF01266; FAD dependent oxidoreductase 320069 4536278 MSMEG_0288 Mycobacterium smegmatis str. MC2 155 FAD dependent oxidoreductase YP_884703.1 318960 D 246196 CDS YP_884704.1 118468043 4531400 320261..321361 1 NC_008596.1 identified by match to protein family HMM PF07859; alpha/beta hydrolase 321361 4531400 MSMEG_0289 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_884704.1 320261 D 246196 CDS YP_884705.1 118468221 4537035 321386..322804 1 NC_008596.1 identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; acyltransferase 322804 4537035 MSMEG_0290 Mycobacterium smegmatis str. MC2 155 acyltransferase YP_884705.1 321386 D 246196 CDS YP_884706.1 118473602 4531037 complement(322807..323652) 1 NC_008596.1 identified by match to protein family HMM PF02668; dioxygenase, TauD/TfdA family protein 323652 4531037 MSMEG_0291 Mycobacterium smegmatis str. MC2 155 dioxygenase, TauD/TfdA family protein YP_884706.1 322807 R 246196 CDS YP_884707.1 118472044 4535390 complement(323681..324010) 1 NC_008596.1 hypothetical protein 324010 4535390 MSMEG_0292 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884707.1 323681 R 246196 CDS YP_884708.1 118469159 4534745 complement(324012..325277) 1 NC_008596.1 identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein 325277 4534745 MSMEG_0293 Mycobacterium smegmatis str. MC2 155 Rieske (2Fe-2S) domain-containing protein YP_884708.1 324012 R 246196 CDS YP_884709.1 118473887 4536582 complement(325317..326060) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; 3-oxoacyl-ACP reductase 326060 fabG 4536582 fabG Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_884709.1 325317 R 246196 CDS YP_884710.1 118472124 4532166 complement(326057..327133) 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; oxidoreductase, FAD-binding 327133 4532166 MSMEG_0295 Mycobacterium smegmatis str. MC2 155 oxidoreductase, FAD-binding YP_884710.1 326057 R 246196 CDS YP_884711.1 118468178 4534392 complement(327192..327647) 1 NC_008596.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 327647 4534392 MSMEG_0296 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_884711.1 327192 R 246196 CDS YP_884712.1 118473888 4536583 complement(327678..328937) 1 NC_008596.1 identified by match to protein family HMM PF01979; match to protein family HMM PF07969; amidohydrolase 328937 4536583 MSMEG_0297 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_884712.1 327678 R 246196 CDS YP_884713.1 118472275 4534801 complement(328934..329275) 1 NC_008596.1 hypothetical protein 329275 4534801 MSMEG_0298 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884713.1 328934 R 246196 CDS YP_884714.1 118471477 4531878 complement(329279..330544) 1 NC_008596.1 identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein 330544 4531878 MSMEG_0299 Mycobacterium smegmatis str. MC2 155 Rieske (2Fe-2S) domain-containing protein YP_884714.1 329279 R 246196 CDS YP_884715.1 118468582 4532709 330792..331799 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 331799 4532709 MSMEG_0300 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_884715.1 330792 D 246196 CDS YP_884716.1 118472951 4531768 complement(331803..333170) 1 NC_008596.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02913; oxidoreductase, FAD-binding 333170 4531768 MSMEG_0301 Mycobacterium smegmatis str. MC2 155 oxidoreductase, FAD-binding YP_884716.1 331803 R 246196 CDS YP_884717.1 118473658 4531229 333272..334264 1 NC_008596.1 identified by match to protein family HMM PF00107; alcohol dehydrogenase 334264 4531229 MSMEG_0303 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_884717.1 333272 D 246196 CDS YP_884718.1 118468419 4534561 complement(334261..335472) 1 NC_008596.1 identified by match to protein family HMM PF00326; match to protein family HMM PF07859; peptidase, S9A/B/C families 335472 4534561 MSMEG_0302 Mycobacterium smegmatis str. MC2 155 peptidase, S9A/B/C families YP_884718.1 334261 R 246196 CDS YP_884719.1 118470076 4535969 complement(335465..337096) 1 NC_008596.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 337096 4535969 MSMEG_0304 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_884719.1 335465 R 246196 CDS YP_884720.1 118469820 4532846 complement(337102..337911) 1 NC_008596.1 identified by match to protein family HMM PF01553; acyltransferase domain-containing protein 337911 4532846 MSMEG_0305 Mycobacterium smegmatis str. MC2 155 acyltransferase domain-containing protein YP_884720.1 337102 R 246196 CDS YP_884721.1 118470600 4532102 337990..338826 1 NC_008596.1 identified by match to protein family HMM PF00797; arylamine N-acetyltransferase 338826 4532102 MSMEG_0306 Mycobacterium smegmatis str. MC2 155 arylamine N-acetyltransferase YP_884721.1 337990 D 246196 CDS YP_884722.1 118467970 4535152 338897..339805 1 NC_008596.1 AraC family transcriptional regulator 339805 4535152 MSMEG_0307 Mycobacterium smegmatis str. MC2 155 AraC family transcriptional regulator YP_884722.1 338897 D 246196 CDS YP_884723.1 118473247 4537307 339809..340336 1 NC_008596.1 dihydrofolate reductase 340336 4537307 MSMEG_0308 Mycobacterium smegmatis str. MC2 155 dihydrofolate reductase YP_884723.1 339809 D 246196 CDS YP_884724.1 118468840 4535417 complement(340411..341904) 1 NC_008596.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 341904 4535417 MSMEG_0309 Mycobacterium smegmatis str. MC2 155 aldehyde dehydrogenase YP_884724.1 340411 R 246196 CDS YP_884725.1 118471101 4535866 342748..343923 1 NC_008596.1 identified by match to protein family HMM PF00534; glycosyltransferase 343923 4535866 MSMEG_0311 Mycobacterium smegmatis str. MC2 155 glycosyltransferase YP_884725.1 342748 D 246196 CDS YP_884726.1 118473288 4535550 complement(343930..344559) 1 NC_008596.1 identified by similarity to SP:P10177; match to protein family HMM PF01081; match to protein family HMM TIGR01182; 2-dehydro-3-deoxyphosphogluconate aldolase 344559 eda 4535550 eda Mycobacterium smegmatis str. MC2 155 2-dehydro-3-deoxyphosphogluconate aldolase YP_884726.1 343930 R 246196 CDS YP_884727.1 118470923 4533971 complement(344556..346385) 1 NC_008596.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 346385 edd 4533971 edd Mycobacterium smegmatis str. MC2 155 phosphogluconate dehydratase YP_884727.1 344556 R 246196 CDS YP_884728.1 118470281 4537542 complement(346382..347869) 1 NC_008596.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 347869 zwf 4537542 zwf Mycobacterium smegmatis str. MC2 155 glucose-6-phosphate 1-dehydrogenase YP_884728.1 346382 R 246196 CDS YP_884729.1 118467726 4534009 348060..349247 1 NC_008596.1 identified by match to protein family HMM PF00480; NagC regulator 349247 4534009 MSMEG_0316 Mycobacterium smegmatis str. MC2 155 NagC regulator YP_884729.1 348060 D 246196 CDS YP_884730.1 118473197 4533314 complement(349207..350844) 1 NC_008596.1 transmembrane protein 350844 4533314 MSMEG_0315 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_884730.1 349207 R 246196 CDS YP_884731.1 118473375 4536620 complement(350874..352070) 1 NC_008596.1 hypothetical protein 352070 4536620 MSMEG_0317 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884731.1 350874 R 246196 CDS YP_884732.1 118473105 4531166 352236..353429 1 NC_008596.1 identified by match to protein family HMM PF01757; acyltransferase 353429 4531166 MSMEG_0319 Mycobacterium smegmatis str. MC2 155 acyltransferase YP_884732.1 352236 D 246196 CDS YP_884733.1 118469411 4531964 complement(353392..354879) 1 NC_008596.1 identified by match to protein family HMM PF00501; AMP-dependent synthetase/ligase 354879 4531964 MSMEG_0318 Mycobacterium smegmatis str. MC2 155 AMP-dependent synthetase/ligase YP_884733.1 353392 R 246196 CDS YP_884734.1 118468184 4534398 complement(354881..355858) 1 NC_008596.1 identified by match to protein family HMM PF02126; phosphotriesterase 355858 4534398 MSMEG_0320 Mycobacterium smegmatis str. MC2 155 phosphotriesterase YP_884734.1 354881 R 246196 CDS YP_884735.1 118473454 4534898 complement(355916..358708) 1 NC_008596.1 identified by match to protein family HMM PF00196; match to protein family HMM PF07721; transcriptional regulator 358708 4534898 MSMEG_0321 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_884735.1 355916 R 246196 CDS YP_884736.1 118472223 4531473 complement(359235..360470) 1 NC_008596.1 identified by match to protein family HMM PF08028; acyl-CoA dehydrogenase 360470 4531473 MSMEG_0323 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_884736.1 359235 R 246196 CDS YP_884737.1 118468096 4536024 360723..361178 1 NC_008596.1 identified by match to protein family HMM PF07366; match to protein family HMM TIGR02096; hypothetical protein 361178 4536024 MSMEG_0324 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884737.1 360723 D 246196 CDS YP_884738.1 118469243 4535379 361191..361703 1 NC_008596.1 identified by match to protein family HMM TIGR02096; hypothetical protein 361703 4535379 MSMEG_0325 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884738.1 361191 D 246196 CDS YP_884739.1 118473471 4531173 361710..363317 1 NC_008596.1 identified by match to protein family HMM PF00501; AMP-dependent synthetase/ligase 363317 4531173 MSMEG_0326 Mycobacterium smegmatis str. MC2 155 AMP-dependent synthetase/ligase YP_884739.1 361710 D 246196 CDS YP_884740.1 118472213 4531463 363333..364835 1 NC_008596.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 364835 4531463 MSMEG_0327 Mycobacterium smegmatis str. MC2 155 aldehyde dehydrogenase YP_884740.1 363333 D 246196 CDS YP_884741.1 118469664 4535426 364857..365306 1 NC_008596.1 hypothetical protein 365306 4535426 MSMEG_0328 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884741.1 364857 D 246196 CDS YP_884742.1 118468131 4535219 365303..365797 1 NC_008596.1 identified by match to protein family HMM PF01613; FMN oxidoreductase 365797 4535219 MSMEG_0329 Mycobacterium smegmatis str. MC2 155 FMN oxidoreductase YP_884742.1 365303 D 246196 CDS YP_884743.1 118471623 4536536 complement(365798..366985) 1 NC_008596.1 identified by match to protein family HMM PF00196; LuxR family transcriptional regulator 366985 4536536 MSMEG_0330 Mycobacterium smegmatis str. MC2 155 LuxR family transcriptional regulator YP_884743.1 365798 R 246196 CDS YP_884744.1 118473214 4531064 complement(366982..368034) 1 NC_008596.1 identified by match to protein family HMM PF00196; match to protein family HMM PF01590; LuxR family transcriptional regulator 368034 4531064 MSMEG_0331 Mycobacterium smegmatis str. MC2 155 LuxR family transcriptional regulator YP_884744.1 366982 R 246196 CDS YP_884745.1 118473497 4532130 368223..369158 1 NC_008596.1 identified by match to protein family HMM PF03060; 2-nitropropane dioxygenase 369158 4532130 MSMEG_0332 Mycobacterium smegmatis str. MC2 155 2-nitropropane dioxygenase YP_884745.1 368223 D 246196 CDS YP_884746.1 118468687 4535910 369275..370873 1 NC_008596.1 identified by match to protein family HMM PF01039; carboxyl transferase domain-containing protein 370873 4535910 MSMEG_0333 Mycobacterium smegmatis str. MC2 155 carboxyl transferase domain-containing protein YP_884746.1 369275 D 246196 CDS YP_884747.1 118470640 4532399 370879..372888 1 NC_008596.1 identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF01071; match to protein family HMM PF02785; match to protein family HMM PF02786; acetyl-/propionyl-coenzyme A carboxylase subunit alpha 372888 4532399 MSMEG_0334 Mycobacterium smegmatis str. MC2 155 acetyl-/propionyl-coenzyme A carboxylase subunit alpha YP_884747.1 370879 D 246196 CDS YP_884748.1 118469639 4534100 372885..373643 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 373643 4534100 MSMEG_0335 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase/isomerase YP_884748.1 372885 D 246196 CDS YP_884749.1 118470656 4534665 373643..374437 1 NC_008596.1 identified by match to protein family HMM TIGR03083; match to protein family HMM TIGR03084; hypothetical protein 374437 4534665 MSMEG_0336 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884749.1 373643 D 246196 CDS YP_884750.1 118469732 4537607 374434..376188 1 NC_008596.1 identified by match to protein family HMM PF07287; hypothetical protein 376188 4537607 MSMEG_0337 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884750.1 374434 D 246196 CDS YP_884751.1 118469196 4535785 376204..377340 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 377340 4535785 MSMEG_0338 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_884751.1 376204 D 246196 CDS YP_884752.1 118469947 4530910 377377..378393 1 NC_008596.1 identified by match to protein family HMM PF00296; FMN-dependent monooxygenase 378393 4530910 MSMEG_0339 Mycobacterium smegmatis str. MC2 155 FMN-dependent monooxygenase YP_884752.1 377377 D 246196 CDS YP_884753.1 118472194 4530852 378402..379154 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 379154 4530852 MSMEG_0340 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase/isomerase YP_884753.1 378402 D 246196 CDS YP_884754.1 118471227 4534414 complement(379158..380174) 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 380174 4534414 MSMEG_0341 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884754.1 379158 R 246196 CDS YP_884755.1 118473543 4532413 complement(380208..381053) 1 NC_008596.1 hypothetical protein 381053 4532413 MSMEG_0342 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884755.1 380208 R 246196 CDS YP_884756.1 118473706 4533254 complement(381177..381809) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 381809 4533254 MSMEG_0343 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_884756.1 381177 R 246196 CDS YP_884757.1 118470891 4537196 382067..382837 1 NC_008596.1 identified by match to protein family HMM PF02405; hypothetical protein 382837 4537196 MSMEG_0344 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884757.1 382067 D 246196 CDS YP_884758.1 118472034 4534115 382881..383699 1 NC_008596.1 identified by match to protein family HMM PF02405; hypothetical protein 383699 4534115 MSMEG_0345 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884758.1 382881 D 246196 CDS YP_884759.1 118470152 4531711 383703..385127 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor 385127 4531711 MSMEG_0346 Mycobacterium smegmatis str. MC2 155 virulence factor YP_884759.1 383703 D 246196 CDS YP_884760.1 118469807 4535948 385157..386185 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 386185 4535948 MSMEG_0347 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_884760.1 385157 D 246196 CDS YP_884761.1 118470845 4534300 386170..387498 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; mce-family protein mce3c 387498 4534300 MSMEG_0348 Mycobacterium smegmatis str. MC2 155 mce-family protein mce3c YP_884761.1 386170 D 246196 CDS YP_884762.1 118468362 4533961 387495..388796 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor mce family protein 388796 4533961 MSMEG_0349 Mycobacterium smegmatis str. MC2 155 virulence factor mce family protein YP_884762.1 387495 D 246196 CDS YP_884763.1 118468700 4534690 388793..389932 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 389932 4534690 MSMEG_0350 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_884763.1 388793 D 246196 CDS YP_884764.1 118473126 4531853 389934..391421 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor mce family protein 391421 4531853 MSMEG_0351 Mycobacterium smegmatis str. MC2 155 virulence factor mce family protein YP_884764.1 389934 D 246196 CDS YP_884765.1 118472928 4531217 391385..391987 1 NC_008596.1 hypothetical protein 391987 4531217 MSMEG_0352 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884765.1 391385 D 246196 CDS YP_884766.1 118473626 4531022 392047..392592 1 NC_008596.1 hypothetical protein 392592 4531022 MSMEG_0353 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884766.1 392047 D 246196 CDS YP_884767.1 118471627 4536502 392616..392957 1 NC_008596.1 identified by match to protein family HMM PF05305; hypothetical protein 392957 4536502 MSMEG_0354 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884767.1 392616 D 246196 CDS YP_884768.1 118470930 4533978 392954..393448 1 NC_008596.1 hypothetical protein 393448 4533978 MSMEG_0355 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884768.1 392954 D 246196 CDS YP_884769.1 118472704 4531672 complement(393601..393897) 1 NC_008596.1 acetyltransferase 393897 4531672 MSMEG_0356 Mycobacterium smegmatis str. MC2 155 acetyltransferase YP_884769.1 393601 R 246196 CDS YP_884770.1 118468968 4533532 394013..395614 1 NC_008596.1 identified by match to protein family HMM PF05977; match to protein family HMM PF07690; transmembrane transporter 395614 4533532 MSMEG_0357 Mycobacterium smegmatis str. MC2 155 transmembrane transporter YP_884770.1 394013 D 246196 CDS YP_884771.1 118470345 4534928 395654..396616 1 NC_008596.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 396616 4534928 MSMEG_0358 Mycobacterium smegmatis str. MC2 155 ribonucleotide-diphosphate reductase subunit beta YP_884771.1 395654 D 246196 CDS YP_884772.1 118469359 4533183 complement(396891..401135) 1 NC_008596.1 hypothetical protein 401135 4533183 MSMEG_0359 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884772.1 396891 R 246196 CDS YP_884773.1 118472091 4537100 complement(401170..401343) 1 NC_008596.1 hypothetical protein 401343 4537100 MSMEG_0360 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884773.1 401170 R 246196 CDS YP_884774.1 118468690 4534680 401448..402611 1 NC_008596.1 identified by match to protein family HMM PF00933; glycosyl hydrolase 402611 4534680 MSMEG_0361 Mycobacterium smegmatis str. MC2 155 glycosyl hydrolase YP_884774.1 401448 D 246196 CDS YP_884775.1 118473847 4533547 complement(402623..403786) 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 403786 4533547 MSMEG_0362 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_884775.1 402623 R 246196 CDS YP_884776.1 118467472 4536989 403864..404502 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 404502 4536989 MSMEG_0363 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_884776.1 403864 D 246196 CDS YP_884777.1 118472780 4531871 404569..404868 1 NC_008596.1 hypothetical protein 404868 4531871 MSMEG_0364 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884777.1 404569 D 246196 CDS YP_884778.1 118471234 4534421 404871..406751 1 NC_008596.1 identified by match to protein family HMM PF06259; hypothetical protein 406751 4534421 MSMEG_0365 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884778.1 404871 D 246196 CDS YP_884779.1 118470546 4533000 406748..407275 1 NC_008596.1 hypothetical protein 407275 4533000 MSMEG_0366 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884779.1 406748 D 246196 CDS YP_884780.1 118467411 4535833 complement(407282..408355) 1 NC_008596.1 identified by match to protein family HMM PF00891; O-demethylpuromycin-O-methyltransferase 408355 4535833 MSMEG_0367 Mycobacterium smegmatis str. MC2 155 O-demethylpuromycin-O-methyltransferase YP_884780.1 407282 R 246196 CDS YP_884781.1 118470398 4533459 408516..409982 1 NC_008596.1 hypothetical protein 409982 4533459 MSMEG_0368 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884781.1 408516 D 246196 CDS YP_884782.1 118468150 4532693 409979..410701 1 NC_008596.1 hypothetical protein 410701 4532693 MSMEG_0369 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884782.1 409979 D 246196 CDS YP_884783.1 118473943 4533889 410691..414047 1 NC_008596.1 hypothetical protein 414047 4533889 MSMEG_0370 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884783.1 410691 D 246196 CDS YP_884784.1 118471054 4537127 complement(414063..414920) 1 NC_008596.1 identified by match to protein family HMM PF01575; MaoC like domain-containing protein 414920 4537127 MSMEG_0371 Mycobacterium smegmatis str. MC2 155 MaoC like domain-containing protein YP_884784.1 414063 R 246196 CDS YP_884785.1 118471722 4536408 complement(414922..416274) 1 NC_008596.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 416274 fabG 4536408 fabG Mycobacterium smegmatis str. MC2 155 3-ketoacyl-ACP reductase YP_884785.1 414922 R 246196 CDS YP_884786.1 118468168 4535040 416355..417653 1 NC_008596.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 417653 4535040 MSMEG_0373 Mycobacterium smegmatis str. MC2 155 acetyl-CoA acetyltransferase YP_884786.1 416355 D 246196 CDS YP_884787.1 118472523 4534721 complement(418197..420065) 1 NC_008596.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02913; glycolate oxidase subunit 420065 4534721 MSMEG_0374 Mycobacterium smegmatis str. MC2 155 glycolate oxidase subunit YP_884787.1 418197 R 246196 CDS YP_884788.1 118473458 4534902 complement(420213..421805) 1 NC_008596.1 identified by match to protein family HMM PF00614; phospholipase D 421805 4534902 MSMEG_0375 Mycobacterium smegmatis str. MC2 155 phospholipase D YP_884788.1 420213 R 246196 CDS YP_884789.1 118469681 4536814 421882..422928 1 NC_008596.1 identified by match to protein family HMM PF00165; match to protein family HMM PF01965; AraC family transcriptional regulator 422928 4536814 MSMEG_0376 Mycobacterium smegmatis str. MC2 155 AraC family transcriptional regulator YP_884789.1 421882 D 246196 CDS YP_884790.1 118470643 4532402 422996..423736 1 NC_008596.1 nitrile hydratase 423736 4532402 MSMEG_0377 Mycobacterium smegmatis str. MC2 155 nitrile hydratase YP_884790.1 422996 D 246196 CDS YP_884791.1 118467812 4535989 423733..424353 1 NC_008596.1 identified by match to protein family HMM PF02979; match to protein family HMM TIGR01323; nitrile hydratase subunit alpha 424353 nthA 4535989 nthA Mycobacterium smegmatis str. MC2 155 nitrile hydratase subunit alpha YP_884791.1 423733 D 246196 CDS YP_884792.1 118467383 4533854 424350..424631 1 NC_008596.1 nitrile hydratase activator P14k 424631 4533854 MSMEG_0379 Mycobacterium smegmatis str. MC2 155 nitrile hydratase activator P14k YP_884792.1 424350 D 246196 CDS YP_884793.1 118473924 4537362 425344..425763 1 NC_008596.1 identified by match to protein family HMM PF05423; MmpS4 protein 425763 4537362 MSMEG_0380 Mycobacterium smegmatis str. MC2 155 MmpS4 protein YP_884793.1 425344 D 246196 CDS YP_884794.1 118471014 4534470 425760..428642 1 NC_008596.1 identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; Mmp14a protein 428642 4534470 MSMEG_0381 Mycobacterium smegmatis str. MC2 155 Mmp14a protein YP_884794.1 425760 D 246196 CDS YP_884795.1 118470823 4532509 428652..431636 1 NC_008596.1 identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; transporter 431636 4532509 MSMEG_0382 Mycobacterium smegmatis str. MC2 155 transporter YP_884795.1 428652 D 246196 CDS YP_884796.1 118469849 4532740 complement(431707..432045) 1 NC_008596.1 hypothetical protein 432045 4532740 MSMEG_0383 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884796.1 431707 R 246196 CDS YP_884797.1 118470588 4531375 complement(432229..433095) 1 NC_008596.1 identified by match to protein family HMM PF00483; match to protein family HMM TIGR01207; glucose-1-phosphate thymidylyltransferase 433095 rfbA 4531375 rfbA Mycobacterium smegmatis str. MC2 155 glucose-1-phosphate thymidylyltransferase YP_884797.1 432229 R 246196 CDS YP_884798.1 118468906 4537068 433614..434870 1 NC_008596.1 identified by match to protein family HMM PF03033; glycosyl transferase family protein 434870 4537068 MSMEG_0385 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_884798.1 433614 D 246196 CDS YP_884799.1 118470339 4534922 434928..436061 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD dependent epimerase/dehydratase 436061 4534922 MSMEG_0386 Mycobacterium smegmatis str. MC2 155 NAD dependent epimerase/dehydratase YP_884799.1 434928 D 246196 CDS YP_884800.1 118469551 4537497 436310..437044 1 NC_008596.1 Rmt2 protein 437044 4537497 MSMEG_0387 Mycobacterium smegmatis str. MC2 155 Rmt2 protein YP_884800.1 436310 D 246196 CDS YP_884801.1 118471957 4536181 437374..438096 1 NC_008596.1 identified by match to protein family HMM PF05711; macrocin-O-methyltransferase 438096 tylF 4536181 tylF Mycobacterium smegmatis str. MC2 155 macrocin-O-methyltransferase YP_884801.1 437374 D 246196 CDS YP_884802.1 118470982 4531902 438130..439398 1 NC_008596.1 identified by match to protein family HMM PF03033; glycosyl transferase family protein 439398 4531902 MSMEG_0389 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_884802.1 438130 D 246196 CDS YP_884803.1 118473249 4537309 439605..440687 1 NC_008596.1 identified by match to protein family HMM PF01757; acyltransferase 440687 4537309 MSMEG_0390 Mycobacterium smegmatis str. MC2 155 acyltransferase YP_884803.1 439605 D 246196 CDS YP_884804.1 118469021 4530873 440861..441649 1 NC_008596.1 Rmt3 protein 441649 4530873 MSMEG_0391 Mycobacterium smegmatis str. MC2 155 Rmt3 protein YP_884804.1 440861 D 246196 CDS YP_884805.1 118469029 4530881 complement(441687..443201) 1 NC_008596.1 identified by match to protein family HMM PF03033; glycosyl transferase family protein 443201 4530881 MSMEG_0392 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_884805.1 441687 R 246196 CDS YP_884806.1 118468071 4533018 443164..443967 1 NC_008596.1 Fmt protein 443967 4533018 MSMEG_0393 Mycobacterium smegmatis str. MC2 155 Fmt protein YP_884806.1 443164 D 246196 CDS YP_884807.1 118470092 4532967 444075..444329 1 NC_008596.1 hypothetical protein 444329 4532967 MSMEG_0394 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884807.1 444075 D 246196 CDS YP_884808.1 118468342 4532093 444662..444796 1 NC_008596.1 hypothetical protein 444796 4532093 MSMEG_0395 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884808.1 444662 D 246196 CDS YP_884809.1 118472952 4531769 complement(445187..445585) 1 NC_008596.1 hypothetical protein 445585 4531769 MSMEG_0396 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884809.1 445187 R 246196 CDS YP_884810.1 118469643 4535053 445304..446626 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 446626 4535053 MSMEG_0397 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_884810.1 445304 D 246196 CDS YP_884811.1 118470692 4532529 complement(446634..447335) 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 447335 4532529 MSMEG_0398 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_884811.1 446634 R 246196 CDS YP_884812.1 118471126 4533485 447638..447868 1 NC_008596.1 identified by match to protein family HMM PF03621; hypothetical protein 447868 4533485 MSMEG_0399 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884812.1 447638 D 246196 CDS YP_884813.1 118471822 4536315 447897..455186 1 NC_008596.1 identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; peptide synthetase 455186 4536315 MSMEG_0400 Mycobacterium smegmatis str. MC2 155 peptide synthetase YP_884813.1 447897 D 246196 CDS YP_884814.1 118472853 4537449 455186..458191 1 NC_008596.1 identified by match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01720; non-ribosomal peptide synthase 458191 4537449 MSMEG_0401 Mycobacterium smegmatis str. MC2 155 non-ribosomal peptide synthase YP_884814.1 455186 D 246196 CDS YP_884815.1 118468008 4533089 458188..465867 1 NC_008596.1 identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; match to protein family HMM TIGR01746; linear gramicidin synthetase subunit D 465867 4533089 MSMEG_0402 Mycobacterium smegmatis str. MC2 155 linear gramicidin synthetase subunit D YP_884815.1 458188 D 246196 CDS YP_884816.1 118468883 4536676 465884..466702 1 NC_008596.1 integral membrane protein 466702 4536676 MSMEG_0403 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_884816.1 465884 D 246196 CDS YP_884817.1 118471544 4537625 466804..467214 1 NC_008596.1 identified by match to protein family HMM PF04946; sigma associated protein 467214 4537625 MSMEG_0404 Mycobacterium smegmatis str. MC2 155 sigma associated protein YP_884817.1 466804 D 246196 CDS YP_884818.1 118470803 4536088 467223..468398 1 NC_008596.1 identified by match to protein family HMM PF04542; match to protein family HMM TIGR02937; extra cytoplasmic sigma factor 468398 4536088 MSMEG_0405 Mycobacterium smegmatis str. MC2 155 extra cytoplasmic sigma factor YP_884818.1 467223 D 246196 CDS YP_884819.1 118473445 4534136 complement(468441..470276) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 470276 4534136 MSMEG_0406 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_884819.1 468441 R 246196 CDS YP_884820.1 118472728 4532356 470514..471602 1 NC_008596.1 identified by match to protein family HMM PF01113; hypothetical protein 471602 4532356 MSMEG_0407 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884820.1 470514 D 246196 CDS YP_884821.1 118471646 4536483 complement(471613..482571) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801; type I modular polyketide synthase 482571 4536483 MSMEG_0408 Mycobacterium smegmatis str. MC2 155 type I modular polyketide synthase YP_884821.1 471613 R 246196 CDS YP_884822.1 118471131 4531818 482813..484234 1 NC_008596.1 identified by match to protein family HMM PF00668; condensation domain-containing protein 484234 4531818 MSMEG_0409 Mycobacterium smegmatis str. MC2 155 condensation domain-containing protein YP_884822.1 482813 D 246196 CDS YP_884823.1 118473558 4532429 484268..487276 1 NC_008596.1 identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; MmpL protein 487276 4532429 MSMEG_0410 Mycobacterium smegmatis str. MC2 155 MmpL protein YP_884823.1 484268 D 246196 CDS YP_884824.1 118468834 4535411 487386..489095 1 NC_008596.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 489095 4535411 MSMEG_0411 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_884824.1 487386 D 246196 CDS YP_884825.1 118471696 4536458 489157..490308 1 NC_008596.1 hypothetical protein 490308 4536458 MSMEG_0412 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884825.1 489157 D 246196 CDS YP_884826.1 118470074 4535967 complement(490313..490990) 1 NC_008596.1 hypothetical protein 490990 4535967 MSMEG_0413 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884826.1 490313 R 246196 CDS YP_884827.1 118467622 4533084 491026..492051 1 NC_008596.1 identified by match to protein family HMM PF03171; oxidoreductase, 2OG-Fe(II) oxygenase 492051 4533084 MSMEG_0414 Mycobacterium smegmatis str. MC2 155 oxidoreductase, 2OG-Fe(II) oxygenase YP_884827.1 491026 D 246196 CDS YP_884828.1 118472837 4537062 492065..492550 1 NC_008596.1 identified by match to protein family HMM PF01613; NADH-FMN oxidoreductase 492550 4537062 MSMEG_0415 Mycobacterium smegmatis str. MC2 155 NADH-FMN oxidoreductase YP_884828.1 492065 D 246196 CDS YP_884829.1 118471502 4536841 complement(492595..492756) 1 NC_008596.1 hypothetical protein 492756 4536841 MSMEG_0416 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884829.1 492595 R 246196 CDS YP_884830.1 118469210 4533264 complement(492834..493583) 1 NC_008596.1 catalyzes the fumarate and succinate interconversion; fumarate reductase is used under anaerobic conditions with glucose or glycerol as carbon source; fumarate reductase iron-sulfur subunit 493583 4533264 MSMEG_0417 Mycobacterium smegmatis str. MC2 155 fumarate reductase iron-sulfur subunit YP_884830.1 492834 R 246196 CDS YP_884831.1 118468903 4537065 complement(493585..495492) 1 NC_008596.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 495492 sdhA 4537065 sdhA Mycobacterium smegmatis str. MC2 155 succinate dehydrogenase flavoprotein subunit YP_884831.1 493585 R 246196 CDS YP_884832.1 118468474 4537295 complement(495575..496396) 1 NC_008596.1 integral membrane protein 496396 4537295 MSMEG_0419 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_884832.1 495575 R 246196 CDS YP_884833.1 118471681 4536443 complement(496449..496745) 1 NC_008596.1 hypothetical protein 496745 4536443 MSMEG_0420 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884833.1 496449 R 246196 CDS YP_884834.1 118472083 4537092 496794..496940 1 NC_008596.1 hypothetical protein 496940 4537092 MSMEG_0421 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884834.1 496794 D 246196 CDS YP_884835.1 118469127 4535340 497010..497777 1 NC_008596.1 transferase 497777 4535340 MSMEG_0422 Mycobacterium smegmatis str. MC2 155 transferase YP_884835.1 497010 D 246196 CDS YP_884836.1 118470907 4537581 497860..498360 1 NC_008596.1 hypothetical protein 498360 4537581 MSMEG_0423 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884836.1 497860 D 246196 CDS YP_884837.1 118472842 4537438 complement(498438..498875) 1 NC_008596.1 identified by match to protein family HMM PF00011; Hsp20/alpha crystallin family protein 498875 4537438 MSMEG_0424 Mycobacterium smegmatis str. MC2 155 Hsp20/alpha crystallin family protein YP_884837.1 498438 R 246196 CDS YP_884838.1 118467662 4536928 complement(498953..499888) 1 NC_008596.1 identified by match to protein family HMM PF00892; membrane protein DcsA 499888 4536928 MSMEG_0425 Mycobacterium smegmatis str. MC2 155 membrane protein DcsA YP_884838.1 498953 R 246196 CDS YP_884839.1 118469904 4533223 499923..501296 1 NC_008596.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator 501296 4533223 MSMEG_0426 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_884839.1 499923 D 246196 CDS YP_884840.1 118469199 4535788 501440..504019 1 NC_008596.1 identified by match to protein family HMM PF00070; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM PF04324; match to protein family HMM PF07992; match to protein family HMM TIGR02374; nitrite reductase [NAD(P)H], large subunit 504019 nirB 4535788 nirB Mycobacterium smegmatis str. MC2 155 nitrite reductase [NAD(P)H], large subunit YP_884840.1 501440 D 246196 CDS YP_884841.1 118467344 4534703 504016..504384 1 NC_008596.1 nitrite reductase [NAD(P)H] small subunit 504384 4534703 MSMEG_0428 Mycobacterium smegmatis str. MC2 155 nitrite reductase [NAD(P)H] small subunit YP_884841.1 504016 D 246196 CDS YP_884842.1 118468528 4535353 complement(504399..504641) 1 NC_008596.1 ferric uptake regulator 504641 4535353 MSMEG_0429 Mycobacterium smegmatis str. MC2 155 ferric uptake regulator YP_884842.1 504399 R 246196 CDS YP_884843.1 118473208 4531058 505025..506392 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; ISMsm4, transposase 506392 4531058 MSMEG_0430 Mycobacterium smegmatis str. MC2 155 ISMsm4, transposase YP_884843.1 505025 D 246196 CDS YP_884844.1 118471319 4534659 complement(506807..507502) 1 NC_008596.1 identified by match to protein family HMM PF01903; hypothetical protein 507502 4534659 MSMEG_0431 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884844.1 506807 R 246196 CDS YP_884845.1 118472313 4532901 complement(507499..508656) 1 NC_008596.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; bifunctional uroporphyrinogen-III synthetase/response regulator domain-containing protein 508656 4532901 MSMEG_0432 Mycobacterium smegmatis str. MC2 155 bifunctional uroporphyrinogen-III synthetase/response regulator domain-containing protein YP_884845.1 507499 R 246196 CDS YP_884846.1 118473903 4536969 complement(508691..510100) 1 NC_008596.1 identified by match to protein family HMM PF07690; nitrite extrusion protein 510100 4536969 MSMEG_0433 Mycobacterium smegmatis str. MC2 155 nitrite extrusion protein YP_884846.1 508691 R 246196 CDS YP_884847.1 118468391 4534780 complement(510209..510841) 1 NC_008596.1 identified by match to protein family HMM PF00583; aminoglycoside 2'-N-acetyltransferase 510841 4534780 MSMEG_0434 Mycobacterium smegmatis str. MC2 155 aminoglycoside 2'-N-acetyltransferase YP_884847.1 510209 R 246196 CDS YP_884848.1 118473156 4532597 complement(510873..511757) 1 NC_008596.1 identified by match to protein family HMM PF02626; match to protein family HMM TIGR00724; allophanate hydrolase subunit 2 511757 4532597 MSMEG_0435 Mycobacterium smegmatis str. MC2 155 allophanate hydrolase subunit 2 YP_884848.1 510873 R 246196 CDS YP_884849.1 118470969 4534541 complement(511773..512405) 1 NC_008596.1 identified by match to protein family HMM PF02682; allophanate hydrolase subunit 1 512405 4534541 MSMEG_0436 Mycobacterium smegmatis str. MC2 155 allophanate hydrolase subunit 1 YP_884849.1 511773 R 246196 CDS YP_884850.1 118473599 4531034 complement(512510..513190) 1 NC_008596.1 identified by match to protein family HMM PF02592; match to protein family HMM TIGR00697; hypothetical protein 513190 4531034 MSMEG_0437 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884850.1 512510 R 246196 CDS YP_884851.1 118469408 4531961 complement(513215..514168) 1 NC_008596.1 identified by match to protein family HMM PF01497; periplasmic binding protein 514168 4531961 MSMEG_0438 Mycobacterium smegmatis str. MC2 155 periplasmic binding protein YP_884851.1 513215 R 246196 CDS YP_884852.1 118469831 4532722 complement(514184..515320) 1 NC_008596.1 identified by match to protein family HMM PF03601; hypothetical protein 515320 4532722 MSMEG_0439 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884852.1 514184 R 246196 CDS YP_884853.1 118470924 4533972 complement(515317..515415) 1 NC_008596.1 hypothetical protein 515415 4533972 MSMEG_0440 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884853.1 515317 R 246196 CDS YP_884854.1 118473163 4532604 complement(515471..516199) 1 NC_008596.1 identified by match to protein family HMM TIGR03083; hypothetical protein 516199 4532604 MSMEG_0441 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884854.1 515471 R 246196 CDS YP_884855.1 118472016 4533617 complement(516209..516811) 1 NC_008596.1 identified by match to protein family HMM PF02909; tetracycline repressor domain-containing protein 516811 4533617 MSMEG_0442 Mycobacterium smegmatis str. MC2 155 tetracycline repressor domain-containing protein YP_884855.1 516209 R 246196 CDS YP_884856.1 118467910 4532643 516901..517893 1 NC_008596.1 identified by match to protein family HMM PF00795; carbon-nitrogen hydrolase 517893 4532643 MSMEG_0443 Mycobacterium smegmatis str. MC2 155 carbon-nitrogen hydrolase YP_884856.1 516901 D 246196 CDS YP_884857.1 118467596 4531412 517901..518923 1 NC_008596.1 identified by match to protein family HMM PF04371; agmatine deiminase 518923 4531412 MSMEG_0444 Mycobacterium smegmatis str. MC2 155 agmatine deiminase YP_884857.1 517901 D 246196 CDS YP_884858.1 118469906 4535560 518920..520557 1 NC_008596.1 identified by match to protein family HMM PF07969; amidohydrolase 520557 4535560 MSMEG_0445 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_884858.1 518920 D 246196 CDS YP_884859.1 118469376 4535890 520569..521912 1 NC_008596.1 identified by match to protein family HMM PF00324; putrescine importer 521912 4535890 MSMEG_0446 Mycobacterium smegmatis str. MC2 155 putrescine importer YP_884859.1 520569 D 246196 CDS YP_884860.1 118468596 4532375 complement(521987..522406) 1 NC_008596.1 identified by match to protein family HMM PF02566; hypothetical protein 522406 4532375 MSMEG_0447 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884860.1 521987 R 246196 CDS YP_884861.1 118473145 4532585 522533..522976 1 NC_008596.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 522976 4532585 MSMEG_0448 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_884861.1 522533 D 246196 CDS YP_884862.1 118471447 4535122 complement(522988..524988) 1 NC_008596.1 identified by match to protein family HMM PF00582; match to protein family HMM PF07690; transporter major facilitator family protein 524988 4535122 MSMEG_0449 Mycobacterium smegmatis str. MC2 155 transporter major facilitator family protein YP_884862.1 522988 R 246196 CDS YP_884863.1 118467402 4535823 525004..525219 1 NC_008596.1 hypothetical protein 525219 4535823 MSMEG_0450 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884863.1 525004 D 246196 CDS YP_884864.1 118473079 4533153 complement(525323..525571) 1 NC_008596.1 oxidoreductase, FAD-linked 525571 4533153 MSMEG_0451 Mycobacterium smegmatis str. MC2 155 oxidoreductase, FAD-linked YP_884864.1 525323 R 246196 CDS YP_884865.1 118469065 4537251 complement(525610..527055) 1 NC_008596.1 identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791; inner membrane permease YgbN 527055 4537251 MSMEG_0452 Mycobacterium smegmatis str. MC2 155 inner membrane permease YgbN YP_884865.1 525610 R 246196 CDS YP_884866.1 118472885 4534028 complement(527092..527604) 1 NC_008596.1 identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313; shikimate kinase 527604 aroK 4534028 aroK Mycobacterium smegmatis str. MC2 155 shikimate kinase YP_884866.1 527092 R 246196 CDS YP_884867.1 118467768 4533399 527730..528464 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 528464 4533399 MSMEG_0454 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_884867.1 527730 D 246196 CDS YP_884868.1 118469782 4535806 528536..529963 1 NC_008596.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 529963 4535806 MSMEG_0455 Mycobacterium smegmatis str. MC2 155 aldehyde dehydrogenase YP_884868.1 528536 D 246196 CDS YP_884869.1 118474051 4531732 complement(529995..532136) 1 NC_008596.1 identified by match to protein family HMM PF00521; match to protein family HMM PF03989; DNA gyrase subunit A 532136 4531732 MSMEG_0456 Mycobacterium smegmatis str. MC2 155 DNA gyrase subunit A YP_884869.1 529995 R 246196 CDS YP_884870.1 118468752 4534241 complement(532147..534180) 1 NC_008596.1 identified by match to protein family HMM PF00986; match to protein family HMM PF02518; DNA topoisomerase IV subunit B 534180 4534241 MSMEG_0457 Mycobacterium smegmatis str. MC2 155 DNA topoisomerase IV subunit B YP_884870.1 532147 R 246196 CDS YP_884871.1 118471407 4534883 534392..535687 1 NC_008596.1 identified by match to protein family HMM PF02518; match to protein family HMM PF07730; two-component system sensor kinase 535687 4534883 MSMEG_0458 Mycobacterium smegmatis str. MC2 155 two-component system sensor kinase YP_884871.1 534392 D 246196 CDS YP_884872.1 118472867 4531351 535697..536341 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; two-component system response regulator 536341 4531351 MSMEG_0459 Mycobacterium smegmatis str. MC2 155 two-component system response regulator YP_884872.1 535697 D 246196 CDS YP_884873.1 118472400 4531810 complement(536353..537297) 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 537297 4531810 MSMEG_0460 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_884873.1 536353 R 246196 CDS YP_884874.1 118472304 4532776 537351..537965 1 NC_008596.1 identified by match to protein family HMM PF01205; CinZ protein 537965 4532776 MSMEG_0461 Mycobacterium smegmatis str. MC2 155 CinZ protein YP_884874.1 537351 D 246196 CDS YP_884875.1 118474004 4530964 538102..538545 1 NC_008596.1 identified by match to protein family HMM PF05423; MmpS4 protein 538545 4530964 MSMEG_0462 Mycobacterium smegmatis str. MC2 155 MmpS4 protein YP_884875.1 538102 D 246196 CDS YP_884876.1 118470420 4534193 538542..541427 1 NC_008596.1 identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; MmpL4 protein 541427 4534193 MSMEG_0463 Mycobacterium smegmatis str. MC2 155 MmpL4 protein YP_884876.1 538542 D 246196 CDS YP_884877.1 118471575 4534437 541484..542098 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 542098 4534437 MSMEG_0465 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_884877.1 541484 D 246196 CDS YP_884878.1 118470874 4536806 complement(542092..542898) 1 NC_008596.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase 542898 4536806 MSMEG_0464 Mycobacterium smegmatis str. MC2 155 phosphomethylpyrimidine kinase YP_884878.1 542092 R 246196 CDS YP_884879.1 118471919 4536220 543024..543872 1 NC_008596.1 hypothetical protein 543872 4536220 MSMEG_0466 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884879.1 543024 D 246196 CDS YP_884880.1 118468593 4532720 complement(543882..544481) 1 NC_008596.1 identified by match to protein family HMM PF01810; match to protein family HMM TIGR00948; membrane transporter 544481 4532720 MSMEG_0467 Mycobacterium smegmatis str. MC2 155 membrane transporter YP_884880.1 543882 R 246196 CDS YP_884881.1 118467610 4533072 544595..545467 1 NC_008596.1 identified by match to protein family HMM PF00583; match to protein family HMM PF01047; PadR family transcriptional regulator 545467 4533072 MSMEG_0469 Mycobacterium smegmatis str. MC2 155 PadR family transcriptional regulator YP_884881.1 544595 D 246196 CDS YP_884882.1 118471968 4536153 complement(545434..546294) 1 NC_008596.1 identified by match to protein family HMM PF00892; integral membrane protein 546294 4536153 MSMEG_0468 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_884882.1 545434 R 246196 CDS YP_884883.1 118470224 4533915 546423..547280 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 547280 4533915 MSMEG_0471 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_884883.1 546423 D 246196 CDS YP_884884.1 118471224 4534411 complement(547268..548872) 1 NC_008596.1 identified by match to protein family HMM PF00135; para-nitrobenzyl esterase 548872 4534411 MSMEG_0470 Mycobacterium smegmatis str. MC2 155 para-nitrobenzyl esterase YP_884884.1 547268 R 246196 CDS YP_884885.1 118468224 4537039 complement(548983..549768) 1 NC_008596.1 lipoprotein 549768 4537039 MSMEG_0472 Mycobacterium smegmatis str. MC2 155 lipoprotein YP_884885.1 548983 R 246196 CDS YP_884886.1 118470159 4534337 550350..551168 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; LuxR family transcriptional regulator 551168 4534337 MSMEG_0473 Mycobacterium smegmatis str. MC2 155 LuxR family transcriptional regulator YP_884886.1 550350 D 246196 CDS YP_884887.1 118467491 4537378 551334..553121 1 NC_008596.1 identified by match to protein family HMM PF00310; match to protein family HMM PF01380; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 553121 4537378 MSMEG_0474 Mycobacterium smegmatis str. MC2 155 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) YP_884887.1 551334 D 246196 CDS YP_884888.1 118469980 4535754 553181..554419 1 NC_008596.1 identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; nucleotide-sugar dehydrogenase 554419 4535754 MSMEG_0475 Mycobacterium smegmatis str. MC2 155 nucleotide-sugar dehydrogenase YP_884888.1 553181 D 246196 CDS YP_884889.1 118469286 4532625 554422..555717 1 NC_008596.1 identified by match to protein family HMM PF00535; match to protein family HMM PF03142; chitin synthase 555717 4532625 MSMEG_0476 Mycobacterium smegmatis str. MC2 155 chitin synthase YP_884889.1 554422 D 246196 CDS YP_884890.1 118471621 4536534 555747..557249 1 NC_008596.1 identified by match to protein family HMM PF01522; hypothetical protein 557249 4536534 MSMEG_0478 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884890.1 555747 D 246196 CDS YP_884891.1 118468610 4532390 complement(557246..557977) 1 NC_008596.1 hypothetical protein 557977 4532390 MSMEG_0477 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884891.1 557246 R 246196 CDS YP_884892.1 118471999 4536146 557252..557959 1 NC_008596.1 hypothetical protein 557959 4536146 MSMEG_0479 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884892.1 557252 D 246196 CDS YP_884893.1 118473781 4535138 complement(557995..558654) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 558654 4535138 MSMEG_0480 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_884893.1 557995 R 246196 CDS YP_884894.1 118469942 4535853 558749..560095 1 NC_008596.1 identified by match to protein family HMM PF01266; FAD dependent oxidoreductase 560095 4535853 MSMEG_0481 Mycobacterium smegmatis str. MC2 155 FAD dependent oxidoreductase YP_884894.1 558749 D 246196 CDS YP_884895.1 118469444 4534820 560092..561786 1 NC_008596.1 identified by match to protein family HMM PF00920; dihydroxy-acid dehydratase 561786 4534820 MSMEG_0482 Mycobacterium smegmatis str. MC2 155 dihydroxy-acid dehydratase YP_884895.1 560092 D 246196 CDS YP_884896.1 118472649 4537668 561813..563186 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; shikimate transporter 563186 4537668 MSMEG_0483 Mycobacterium smegmatis str. MC2 155 shikimate transporter YP_884896.1 561813 D 246196 CDS YP_884897.1 118471660 4536497 complement(563191..564300) 1 NC_008596.1 identified by match to protein family HMM PF03069; formamidase 564300 4536497 MSMEG_0484 Mycobacterium smegmatis str. MC2 155 formamidase YP_884897.1 563191 R 246196 CDS YP_884898.1 118468365 4533964 complement(564297..565826) 1 NC_008596.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 565826 4533964 MSMEG_0485 Mycobacterium smegmatis str. MC2 155 amidase YP_884898.1 564297 R 246196 CDS YP_884899.1 118467386 4533857 complement(565863..566894) 1 NC_008596.1 ABC transporter periplasmic protein 566894 4533857 MSMEG_0486 Mycobacterium smegmatis str. MC2 155 ABC transporter periplasmic protein YP_884899.1 565863 R 246196 CDS YP_884900.1 118472663 4535083 complement(566907..567740) 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 567740 4535083 MSMEG_0487 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_884900.1 566907 R 246196 CDS YP_884901.1 118472127 4532169 complement(567784..568551) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 568551 4532169 MSMEG_0488 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_884901.1 567784 R 246196 CDS YP_884902.1 118472659 4535079 568865..570037 1 NC_008596.1 identified by match to protein family HMM PF02515; racemase 570037 4535079 MSMEG_0489 Mycobacterium smegmatis str. MC2 155 racemase YP_884902.1 568865 D 246196 CDS YP_884903.1 118468698 4534688 570034..570816 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase 570816 4534688 MSMEG_0490 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_884903.1 570034 D 246196 CDS YP_884904.1 118467899 4531255 complement(570847..571875) 1 NC_008596.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 571875 4531255 MSMEG_0491 Mycobacterium smegmatis str. MC2 155 LacI family transcriptional regulator YP_884904.1 570847 R 246196 CDS YP_884905.1 118469998 4533121 complement(571918..572553) 1 NC_008596.1 hypothetical protein 572553 4533121 MSMEG_0492 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884905.1 571918 R 246196 CDS YP_884906.1 118469833 4532724 complement(572636..572803) 1 NC_008596.1 hypothetical protein 572803 4532724 MSMEG_0493 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884906.1 572636 R 246196 CDS YP_884907.1 118470908 4537582 complement(573002..573169) 1 NC_008596.1 hypothetical protein 573169 4537582 MSMEG_0494 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884907.1 573002 R 246196 CDS YP_884908.1 118468095 4536023 complement(574846..575205) 1 NC_008596.1 coenzyme B12-dependent glycerol dehydrogenase small subunit 575205 4536023 MSMEG_0496 Mycobacterium smegmatis str. MC2 155 coenzyme B12-dependent glycerol dehydrogenase small subunit YP_884908.1 574846 R 246196 CDS YP_884909.1 118470012 4532750 complement(575202..577466) 1 NC_008596.1 identified by match to protein family HMM PF02286; glycerol dehydratase large subunit 577466 4532750 MSMEG_0497 Mycobacterium smegmatis str. MC2 155 glycerol dehydratase large subunit YP_884909.1 575202 R 246196 CDS YP_884910.1 118471505 4536844 complement(577603..577719) 1 NC_008596.1 hypothetical protein 577719 4536844 MSMEG_0498 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884910.1 577603 R 246196 CDS YP_884911.1 118472802 4536656 577723..579150 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 579150 4536656 MSMEG_0499 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_884911.1 577723 D 246196 CDS YP_884912.1 118473975 4533046 579284..580351 1 NC_008596.1 identified by match to protein family HMM PF07905; regulator of polyketide synthase expression 580351 4533046 MSMEG_0500 Mycobacterium smegmatis str. MC2 155 regulator of polyketide synthase expression YP_884912.1 579284 D 246196 CDS YP_884913.1 118468489 4537678 complement(580361..581107) 1 NC_008596.1 identified by match to protein family HMM PF01182; glucosamine-6-phosphate deaminase 1 581107 4537678 MSMEG_0501 Mycobacterium smegmatis str. MC2 155 glucosamine-6-phosphate deaminase 1 YP_884913.1 580361 R 246196 CDS YP_884914.1 118467694 4537332 complement(581104..582480) 1 NC_008596.1 identified by match to protein family HMM PF02056; glucosidase 582480 4537332 MSMEG_0502 Mycobacterium smegmatis str. MC2 155 glucosidase YP_884914.1 581104 R 246196 CDS YP_884915.1 118470629 4532987 complement(582477..583253) 1 NC_008596.1 identified by match to protein family HMM PF00455; match to protein family HMM PF08220; DeoR family transcriptional regulator 583253 4532987 MSMEG_0503 Mycobacterium smegmatis str. MC2 155 DeoR family transcriptional regulator YP_884915.1 582477 R 246196 CDS YP_884916.1 118469709 4537214 583427..584413 1 NC_008596.1 identified by match to protein family HMM PF00294; carbohydrate kinase 584413 4537214 MSMEG_0504 Mycobacterium smegmatis str. MC2 155 carbohydrate kinase YP_884916.1 583427 D 246196 CDS YP_884917.1 118468779 4535670 584410..585780 1 NC_008596.1 identified by match to protein family HMM PF01547; sugar ABC transporter substrate-binding protein 585780 4535670 MSMEG_0505 Mycobacterium smegmatis str. MC2 155 sugar ABC transporter substrate-binding protein YP_884917.1 584410 D 246196 CDS YP_884918.1 118472618 4537268 585885..586739 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 586739 4537268 MSMEG_0506 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_884918.1 585885 D 246196 CDS YP_884919.1 118468306 4533064 586736..587560 1 NC_008596.1 identified by match to protein family HMM PF00528; sugar ABC transporter permease 587560 4533064 MSMEG_0507 Mycobacterium smegmatis str. MC2 155 sugar ABC transporter permease YP_884919.1 586736 D 246196 CDS YP_884920.1 118470869 4536801 587587..588657 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF03459; glycerol-phosphate porter 588657 4536801 MSMEG_0508 Mycobacterium smegmatis str. MC2 155 glycerol-phosphate porter YP_884920.1 587587 D 246196 CDS YP_884921.1 118472758 4531947 complement(588742..589527) 1 NC_008596.1 identified by match to protein family HMM PF00455; match to protein family HMM PF01022; match to protein family HMM PF08220; transcriptional regulatory protein 589527 4531947 MSMEG_0509 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_884921.1 588742 R 246196 CDS YP_884922.1 118473625 4531021 589666..590988 1 NC_008596.1 identified by match to protein family HMM PF08013; match to protein family HMM TIGR02810; D-tagatose-bisphosphate aldolase non-catalytic subunit 590988 4531021 MSMEG_0510 Mycobacterium smegmatis str. MC2 155 D-tagatose-bisphosphate aldolase non-catalytic subunit YP_884922.1 589666 D 246196 CDS YP_884923.1 118472617 4537267 590985..592127 1 NC_008596.1 identified by match to protein family HMM PF01380; sugar isomerase 592127 4537267 MSMEG_0511 Mycobacterium smegmatis str. MC2 155 sugar isomerase YP_884923.1 590985 D 246196 CDS YP_884924.1 118468803 4535321 592124..593104 1 NC_008596.1 identified by match to protein family HMM PF01869; BadF/BadG/BcrA/BcrD ATPase 593104 4535321 MSMEG_0512 Mycobacterium smegmatis str. MC2 155 BadF/BadG/BcrA/BcrD ATPase YP_884924.1 592124 D 246196 CDS YP_884925.1 118469751 4532036 593126..594091 1 NC_008596.1 identified by match to protein family HMM PF00892; integral membrane protein 594091 4532036 MSMEG_0513 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_884925.1 593126 D 246196 CDS YP_884926.1 118468792 4535310 594088..595401 1 NC_008596.1 identified by match to protein family HMM PF02056; alpha-galactosidase 595401 4535310 MSMEG_0514 Mycobacterium smegmatis str. MC2 155 alpha-galactosidase YP_884926.1 594088 D 246196 CDS YP_884927.1 118473008 4531300 595444..596721 1 NC_008596.1 identified by match to protein family HMM PF01547; sugar transporter sugar binding lipoprotein 596721 4531300 MSMEG_0515 Mycobacterium smegmatis str. MC2 155 sugar transporter sugar binding lipoprotein YP_884927.1 595444 D 246196 CDS YP_884928.1 118471945 4536169 596736..597647 1 NC_008596.1 identified by match to protein family HMM PF00528; sugar transporter 597647 4536169 MSMEG_0516 Mycobacterium smegmatis str. MC2 155 sugar transporter YP_884928.1 596736 D 246196 CDS YP_884929.1 118472031 4534112 597644..598570 1 NC_008596.1 identified by match to protein family HMM PF00528; sugar binding-protein dependent transporter system permease 598570 4534112 MSMEG_0517 Mycobacterium smegmatis str. MC2 155 sugar binding-protein dependent transporter system permease YP_884929.1 597644 D 246196 CDS YP_884930.1 118470058 4534603 598612..599718 1 NC_008596.1 identified by match to protein family HMM PF00005; sn-glycerol-3-phosphate ABC transporter ATPase 599718 4534603 MSMEG_0518 Mycobacterium smegmatis str. MC2 155 sn-glycerol-3-phosphate ABC transporter ATPase YP_884930.1 598612 D 246196 CDS YP_884931.1 118468876 4533761 599806..599922 1 NC_008596.1 hypothetical protein 599922 4533761 MSMEG_0519 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884931.1 599806 D 246196 CDS YP_884932.1 118471254 4531530 600086..600733 1 NC_008596.1 porin 600733 4531530 MSMEG_0520 Mycobacterium smegmatis str. MC2 155 porin YP_884932.1 600086 D 246196 CDS YP_884933.1 118471892 4536229 601925..602077 1 NC_008596.1 pp24 protein 602077 4536229 MSMEG_0522 Mycobacterium smegmatis str. MC2 155 pp24 protein YP_884933.1 601925 D 246196 CDS YP_884934.1 118469559 4537505 complement(602113..603006) 1 NC_008596.1 DNA-binding protein 603006 4537505 MSMEG_0523 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_884934.1 602113 R 246196 CDS YP_884935.1 118473754 4537730 complement(603036..603863) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase 603863 4537730 MSMEG_0524 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_884935.1 603036 R 246196 CDS YP_884936.1 118474001 4530961 603897..604079 1 NC_008596.1 hypothetical protein 604079 4530961 MSMEG_0525 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884936.1 603897 D 246196 CDS YP_884937.1 118470429 4532220 604076..605674 1 NC_008596.1 identified by match to protein family HMM PF00732; match to protein family HMM PF05199; oxidoreductase, GMC family protein 605674 4532220 MSMEG_0526 Mycobacterium smegmatis str. MC2 155 oxidoreductase, GMC family protein YP_884937.1 604076 D 246196 CDS YP_884938.1 118471175 4534961 605757..606500 1 NC_008596.1 identified by match to protein family HMM PF00106; 2-hydroxycyclohexnecarboxyl-CoA dehydrogenase 606500 4534961 MSMEG_0527 Mycobacterium smegmatis str. MC2 155 2-hydroxycyclohexnecarboxyl-CoA dehydrogenase YP_884938.1 605757 D 246196 CDS YP_884939.1 118468574 4532701 606524..607450 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 607450 4532701 MSMEG_0528 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884939.1 606524 D 246196 CDS YP_884940.1 118469133 4532549 complement(607494..610940) 1 NC_008596.1 identified by match to protein family HMM PF00069; match to protein family HMM PF07721; serine/threonine protein kinase 610940 4532549 MSMEG_0529 Mycobacterium smegmatis str. MC2 155 serine/threonine protein kinase YP_884940.1 607494 R 246196 CDS YP_884941.1 118468381 4532930 complement(611055..611756) 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 611756 4532930 MSMEG_0530 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_884941.1 611055 R 246196 CDS YP_884942.1 118467521 4535532 complement(611979..613190) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 613190 4535532 MSMEG_0531 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_884942.1 611979 R 246196 CDS YP_884943.1 118469521 4536725 complement(613219..613836) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 613836 4536725 MSMEG_0532 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_884943.1 613219 R 246196 CDS YP_884944.1 118470469 4536778 complement(613901..614440) 1 NC_008596.1 gp236 protein 614440 4536778 MSMEG_0533 Mycobacterium smegmatis str. MC2 155 gp236 protein YP_884944.1 613901 R 246196 CDS YP_884945.1 118467480 4536998 complement(614551..615804) 1 NC_008596.1 identified by match to protein family HMM PF07690; permease, major facilitator family protein 615804 4536998 MSMEG_0534 Mycobacterium smegmatis str. MC2 155 permease, major facilitator family protein YP_884945.1 614551 R 246196 CDS YP_884946.1 118469006 4536056 complement(615801..616439) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 616439 4536056 MSMEG_0535 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_884946.1 615801 R 246196 CDS YP_884947.1 118472145 4532482 complement(616498..617064) 1 NC_008596.1 identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382; intracellular protease PfpI family protein 617064 4532482 MSMEG_0536 Mycobacterium smegmatis str. MC2 155 intracellular protease PfpI family protein YP_884947.1 616498 R 246196 CDS YP_884948.1 118471260 4531536 complement(617136..617564) 1 NC_008596.1 hypothetical protein 617564 4531536 MSMEG_0537 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884948.1 617136 R 246196 CDS YP_884949.1 118469120 4535333 complement(617579..618070) 1 NC_008596.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 618070 4535333 MSMEG_0538 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_884949.1 617579 R 246196 CDS YP_884950.1 118471613 4536525 complement(618144..618818) 1 NC_008596.1 identified by match to protein family HMM PF00027; match to protein family HMM PF00325; Crp/Fnr family transcriptional regulator protein 618818 4536525 MSMEG_0539 Mycobacterium smegmatis str. MC2 155 Crp/Fnr family transcriptional regulator protein YP_884950.1 618144 R 246196 CDS YP_884951.1 118473404 4537022 618988..619611 1 NC_008596.1 identified by match to protein family HMM PF04299; transcriptional regulator 619611 4537022 MSMEG_0540 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_884951.1 618988 D 246196 CDS YP_884952.1 118472883 4534026 619744..620037 1 NC_008596.1 hypothetical protein 620037 4534026 MSMEG_0541 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884952.1 619744 D 246196 CDS YP_884953.1 118470623 4532981 620034..620738 1 NC_008596.1 identified by match to protein family HMM PF03861; ANTAR domain-containing protein 620738 4532981 MSMEG_0542 Mycobacterium smegmatis str. MC2 155 ANTAR domain-containing protein YP_884953.1 620034 D 246196 CDS YP_884954.1 118468440 4535598 620809..621762 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator 621762 4535598 MSMEG_0544 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_884954.1 620809 D 246196 CDS YP_884955.1 118473222 4536908 complement(621750..622790) 1 NC_008596.1 hypothetical protein 622790 4536908 MSMEG_0543 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884955.1 621750 R 246196 CDS YP_884956.1 118473302 4535173 complement(622986..623513) 1 NC_008596.1 LuxR family transcriptional regulator 623513 4535173 MSMEG_0545 Mycobacterium smegmatis str. MC2 155 LuxR family transcriptional regulator YP_884956.1 622986 R 246196 CDS YP_884957.1 118471454 4534373 complement(623786..624613) 1 NC_008596.1 hypothetical protein 624613 4534373 MSMEG_0546 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884957.1 623786 R 246196 CDS YP_884958.1 118472265 4531574 624722..625600 1 NC_008596.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 625600 4531574 MSMEG_0548 Mycobacterium smegmatis str. MC2 155 chromosome replication initiation inhibitor protein YP_884958.1 624722 D 246196 CDS YP_884959.1 118471964 4536149 complement(625597..626658) 1 NC_008596.1 identified by similarity to GB:CAD18826.1; ISMsm5, transposase 626658 4536149 MSMEG_0547 Mycobacterium smegmatis str. MC2 155 ISMsm5, transposase YP_884959.1 625597 R 246196 CDS YP_884960.1 118469502 4533329 complement(626702..627430) 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 627430 4533329 MSMEG_0549 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_884960.1 626702 R 246196 CDS YP_884961.1 118467390 4533861 complement(627472..628440) 1 NC_008596.1 identified by match to protein family HMM TIGR01728; sulfonate binding protein 628440 4533861 MSMEG_0550 Mycobacterium smegmatis str. MC2 155 sulfonate binding protein YP_884961.1 627472 R 246196 CDS YP_884962.1 118469282 4532252 complement(628489..629271) 1 NC_008596.1 identified by match to protein family HMM PF00005; nitrate/sulfonate/bicarbonate ABC transporter ATPase 629271 4532252 MSMEG_0551 Mycobacterium smegmatis str. MC2 155 nitrate/sulfonate/bicarbonate ABC transporter ATPase YP_884962.1 628489 R 246196 CDS YP_884963.1 118470222 4533913 629360..629854 1 NC_008596.1 identified by match to protein family HMM PF02566; hypothetical protein 629854 4533913 MSMEG_0552 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884963.1 629360 D 246196 CDS YP_884964.1 118468330 4532081 629922..631274 1 NC_008596.1 identified by match to protein family HMM PF01547; sugar ABC transporter substrate-binding protein 631274 4532081 MSMEG_0553 Mycobacterium smegmatis str. MC2 155 sugar ABC transporter substrate-binding protein YP_884964.1 629922 D 246196 CDS YP_884965.1 118470279 4537540 631271..632140 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 632140 4537540 MSMEG_0554 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_884965.1 631271 D 246196 CDS YP_884966.1 118470147 4531706 632137..632928 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 632928 4531706 MSMEG_0555 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_884966.1 632137 D 246196 CDS YP_884967.1 118469449 4534826 632925..633980 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter 633980 4534826 MSMEG_0556 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_884967.1 632925 D 246196 CDS YP_884968.1 118470993 4531913 634165..634302 1 NC_008596.1 hypothetical protein 634302 4531913 MSMEG_0557 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884968.1 634165 D 246196 CDS YP_884969.1 118467935 4533414 634299..634826 1 NC_008596.1 hypothetical protein 634826 4533414 MSMEG_0558 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884969.1 634299 D 246196 CDS YP_884970.1 118470416 4534189 complement(634899..635102) 1 NC_008596.1 identified by match to protein family HMM PF00313; hypothetical protein 635102 4534189 MSMEG_0559 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884970.1 634899 R 246196 CDS YP_884971.1 118468914 4537076 complement(635220..636284) 1 NC_008596.1 identified by match to protein family HMM PF01113; dihydrodipicolinate reductase N-terminus domain-containing protein 636284 dapB 4537076 dapB Mycobacterium smegmatis str. MC2 155 dihydrodipicolinate reductase N-terminus domain-containing protein YP_884971.1 635220 R 246196 CDS YP_884972.1 118470920 4533968 636421..637101 1 NC_008596.1 identified by match to protein family HMM PF00440; match to protein family HMM PF02909; TetR family transcriptional regulator 637101 4533968 MSMEG_0561 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_884972.1 636421 D 246196 CDS YP_884973.1 118469667 4535429 637149..637904 1 NC_008596.1 hypothetical protein 637904 4535429 MSMEG_0563 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884973.1 637149 D 246196 CDS YP_884974.1 118470642 4532401 complement(637893..638879) 1 NC_008596.1 identified by match to protein family HMM PF05661; hypothetical protein 638879 4532401 MSMEG_0562 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884974.1 637893 R 246196 CDS YP_884975.1 118469877 4536569 complement(638914..640326) 1 NC_008596.1 identified by match to protein family HMM PF00860; match to protein family HMM PF00916; xanthine/uracil permease 640326 4536569 MSMEG_0564 Mycobacterium smegmatis str. MC2 155 xanthine/uracil permease YP_884975.1 638914 R 246196 CDS YP_884976.1 118467394 4533865 complement(640338..641435) 1 NC_008596.1 identified by match to protein family HMM PF00534; glycosyl transferase family protein 641435 4533865 MSMEG_0565 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_884976.1 640338 R 246196 CDS YP_884977.1 118468302 4533060 complement(641432..642280) 1 NC_008596.1 identified by match to protein family HMM PF00795; aliphatic amidase 642280 4533060 MSMEG_0566 Mycobacterium smegmatis str. MC2 155 aliphatic amidase YP_884977.1 641432 R 246196 CDS YP_884978.1 118468587 4532714 complement(642290..643711) 1 NC_008596.1 identified by match to protein family HMM PF00583; match to protein family HMM PF02769; selenophosphate synthetase 643711 4532714 MSMEG_0567 Mycobacterium smegmatis str. MC2 155 selenophosphate synthetase YP_884978.1 642290 R 246196 CDS YP_884979.1 118469593 4531098 complement(643711..644760) 1 NC_008596.1 identified by match to protein family HMM PF04055; radical SAM domain-containing protein 644760 4531098 MSMEG_0568 Mycobacterium smegmatis str. MC2 155 radical SAM domain-containing protein YP_884979.1 643711 R 246196 CDS YP_884980.1 118472231 4532452 complement(644774..646045) 1 NC_008596.1 identified by match to protein family HMM PF07992; potassium transport flavoprotein 646045 4532452 MSMEG_0569 Mycobacterium smegmatis str. MC2 155 potassium transport flavoprotein YP_884980.1 644774 R 246196 CDS YP_884981.1 118473341 4532006 complement(646042..646338) 1 NC_008596.1 hypothetical protein 646338 4532006 MSMEG_0570 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884981.1 646042 R 246196 CDS YP_884982.1 118471946 4536170 complement(646331..647233) 1 NC_008596.1 identified by match to protein family HMM PF00795; carbon-nitrogen hydrolase 647233 4536170 MSMEG_0571 Mycobacterium smegmatis str. MC2 155 carbon-nitrogen hydrolase YP_884982.1 646331 R 246196 CDS YP_884983.1 118467804 4535981 complement(647243..647764) 1 NC_008596.1 hypothetical protein 647764 4535981 MSMEG_0572 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884983.1 647243 R 246196 CDS YP_884984.1 118470458 4534521 648080..648733 1 NC_008596.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; ECF sigma factor RpoE1 648733 4534521 MSMEG_0574 Mycobacterium smegmatis str. MC2 155 ECF sigma factor RpoE1 YP_884984.1 648080 D 246196 CDS YP_884985.1 118470136 4531695 complement(648700..649296) 1 NC_008596.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; ECF sigma factor RpoE1 649296 4531695 MSMEG_0573 Mycobacterium smegmatis str. MC2 155 ECF sigma factor RpoE1 YP_884985.1 648700 R 246196 CDS YP_884986.1 118472449 4533590 649562..649978 1 NC_008596.1 identified by match to protein family HMM PF05423; MmpS1 protein 649978 4533590 MSMEG_0575 Mycobacterium smegmatis str. MC2 155 MmpS1 protein YP_884986.1 649562 D 246196 CDS YP_884987.1 118471573 4534435 649975..652866 1 NC_008596.1 identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; MmpL4 protein 652866 4534435 MSMEG_0576 Mycobacterium smegmatis str. MC2 155 MmpL4 protein YP_884987.1 649975 D 246196 CDS YP_884988.1 118473984 4531428 652908..654131 1 NC_008596.1 identified by match to protein family HMM PF07690; major facilitator superfamily protein 654131 4531428 MSMEG_0577 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_884988.1 652908 D 246196 CDS YP_884989.1 118469489 4534463 654135..655271 1 NC_008596.1 identified by match to protein family HMM PF02770; acyl-CoA dehydrogenase 655271 4534463 MSMEG_0578 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_884989.1 654135 D 246196 CDS YP_884990.1 118473254 4537315 655294..656088 1 NC_008596.1 hypothetical protein 656088 4537315 MSMEG_0580 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884990.1 655294 D 246196 CDS YP_884991.1 118473441 4534132 complement(656078..657565) 1 NC_008596.1 identified by match to protein family HMM PF02954; match to protein family HMM PF07905; Fis family transcriptional regulator 657565 4534132 MSMEG_0579 Mycobacterium smegmatis str. MC2 155 Fis family transcriptional regulator YP_884991.1 656078 R 246196 CDS YP_884992.1 118467469 4536614 657676..659022 1 NC_008596.1 identified by match to protein family HMM PF00202; match to protein family HMM TIGR00700; 4-aminobutyrate aminotransferase 659022 gabT 4536614 gabT Mycobacterium smegmatis str. MC2 155 4-aminobutyrate aminotransferase YP_884992.1 657676 D 246196 CDS YP_884993.1 118470545 4532999 659025..660479 1 NC_008596.1 identified by match to protein family HMM PF00171; succinate-semialdehyde dehydrogenase 660479 4532999 MSMEG_0582 Mycobacterium smegmatis str. MC2 155 succinate-semialdehyde dehydrogenase YP_884993.1 659025 D 246196 CDS YP_884994.1 118468606 4532386 complement(660492..660752) 1 NC_008596.1 hypothetical protein 660752 4532386 MSMEG_0583 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884994.1 660492 R 246196 CDS YP_884995.1 118471495 4536834 complement(660999..662471) 1 NC_008596.1 hypothetical protein 662471 4536834 MSMEG_0584 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_884995.1 660999 R 246196 CDS YP_884996.1 118473414 4537401 661011..662237 1 NC_008596.1 identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F 662237 4537401 MSMEG_0585 Mycobacterium smegmatis str. MC2 155 L-carnitine dehydratase/bile acid-inducible protein F YP_884996.1 661011 D 246196 CDS YP_884997.1 118469263 4531556 complement(662508..662897) 1 NC_008596.1 identified by match to protein family HMM PF01740; STAS domain-containing protein 662897 4531556 MSMEG_0586 Mycobacterium smegmatis str. MC2 155 STAS domain-containing protein YP_884997.1 662508 R 246196 CDS YP_884998.1 118472946 4531762 663229..663549 1 NC_008596.1 identified by match to protein family HMM PF05336; L-rhamnose 1-epimerase 663549 rhaU 4531762 rhaU Mycobacterium smegmatis str. MC2 155 L-rhamnose 1-epimerase YP_884998.1 663229 D 246196 CDS YP_884999.1 118467713 4537721 663590..664921 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; rhamnose tranport protein 664921 4537721 MSMEG_0588 Mycobacterium smegmatis str. MC2 155 rhamnose tranport protein YP_884999.1 663590 D 246196 CDS YP_885000.1 118473831 4531985 664918..666081 1 NC_008596.1 identified by match to protein family HMM TIGR02635; L-rhamnose isomerase 666081 rhaI 4531985 rhaI Mycobacterium smegmatis str. MC2 155 L-rhamnose isomerase YP_885000.1 664918 D 246196 CDS YP_885001.1 118471451 4535126 666069..668123 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF00596; match to protein family HMM TIGR02632; short chain dehydrogenase 668123 rhaD 4535126 rhaD Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_885001.1 666069 D 246196 CDS YP_885002.1 118473677 4531074 668184..669641 1 NC_008596.1 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; rhamnulokinase 669641 rhaB 4531074 rhaB Mycobacterium smegmatis str. MC2 155 rhamnulokinase YP_885002.1 668184 D 246196 CDS YP_885003.1 118469612 4531584 669649..670650 1 NC_008596.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; rhamnose catabolism operon transcriptional regulator 670650 4531584 MSMEG_0592 Mycobacterium smegmatis str. MC2 155 rhamnose catabolism operon transcriptional regulator YP_885003.1 669649 D 246196 CDS YP_885004.1 118470832 4532518 complement(670737..671384) 1 NC_008596.1 identified by match to protein family HMM PF02589; hypothetical protein 671384 4532518 MSMEG_0593 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885004.1 670737 R 246196 CDS YP_885005.1 118473259 4537688 complement(671348..672817) 1 NC_008596.1 identified by match to protein family HMM TIGR00273; iron-sulfur cluster binding protein 672817 4537688 MSMEG_0594 Mycobacterium smegmatis str. MC2 155 iron-sulfur cluster binding protein YP_885005.1 671348 R 246196 CDS YP_885006.1 118467419 4536035 complement(672814..673551) 1 NC_008596.1 identified by match to protein family HMM PF02754; glycolate oxidase 673551 4536035 MSMEG_0595 Mycobacterium smegmatis str. MC2 155 glycolate oxidase YP_885006.1 672814 R 246196 CDS YP_885007.1 118472081 4537090 673641..674327 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 674327 4537090 MSMEG_0596 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_885007.1 673641 D 246196 CDS YP_885008.1 118468889 4536682 674388..674783 1 NC_008596.1 hypothetical protein 674783 4536682 MSMEG_0598 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885008.1 674388 D 246196 CDS YP_885009.1 118470392 4533453 complement(674780..676060) 1 NC_008596.1 hypothetical protein 676060 4533453 MSMEG_0597 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885009.1 674780 R 246196 CDS YP_885010.1 118473796 4531275 676104..677750 1 NC_008596.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 677750 4531275 MSMEG_0599 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_885010.1 676104 D 246196 CDS YP_885011.1 118472857 4537453 677821..678603 1 NC_008596.1 identified by match to protein family HMM PF00106; dehydrogenase 678603 4537453 MSMEG_0600 Mycobacterium smegmatis str. MC2 155 dehydrogenase YP_885011.1 677821 D 246196 CDS YP_885012.1 118470066 4535959 complement(678620..678928) 1 NC_008596.1 hypothetical protein 678928 4535959 MSMEG_0601 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885012.1 678620 R 246196 CDS YP_885013.1 118469104 4535297 complement(678969..679124) 1 NC_008596.1 hypothetical protein 679124 4535297 MSMEG_0602 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885013.1 678969 R 246196 CDS YP_885014.1 118468972 4533536 complement(679378..681582) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 681582 4533536 MSMEG_0603 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_885014.1 679378 R 246196 CDS YP_885015.1 118468626 4535024 complement(681693..682661) 1 NC_008596.1 identified by match to protein family HMM PF00389; match to protein family HMM PF02826; glyoxylate reductase 682661 4535024 MSMEG_0604 Mycobacterium smegmatis str. MC2 155 glyoxylate reductase YP_885015.1 681693 R 246196 CDS YP_885016.1 118469958 4530921 complement(682652..683758) 1 NC_008596.1 hypothetical protein 683758 4530921 MSMEG_0605 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885016.1 682652 R 246196 CDS YP_885017.1 118470523 4536115 complement(683791..684420) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 684420 4536115 MSMEG_0606 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885017.1 683791 R 246196 CDS YP_885018.1 118470332 4534915 684535..685134 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase 685134 4534915 MSMEG_0608 Mycobacterium smegmatis str. MC2 155 glyoxalase YP_885018.1 684535 D 246196 CDS YP_885019.1 118473691 4531088 complement(685104..685946) 1 NC_008596.1 identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, , family protein 685946 4531088 MSMEG_0607 Mycobacterium smegmatis str. MC2 155 methyltransferase, , family protein YP_885019.1 685104 R 246196 CDS YP_885020.1 118472648 4537667 complement(685955..686830) 1 NC_008596.1 identified by match to protein family HMM PF01381; hypothetical protein 686830 4537667 MSMEG_0609 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885020.1 685955 R 246196 CDS YP_885021.1 118468701 4534691 686934..687842 1 NC_008596.1 identified by match to protein family HMM PF00753; beta-lactamase 687842 4534691 MSMEG_0610 Mycobacterium smegmatis str. MC2 155 beta-lactamase YP_885021.1 686934 D 246196 CDS YP_885022.1 118473393 4537011 687835..689295 1 NC_008596.1 identified by match to protein family HMM PF00135; para-nitrobenzyl esterase 689295 4537011 MSMEG_0611 Mycobacterium smegmatis str. MC2 155 para-nitrobenzyl esterase YP_885022.1 687835 D 246196 CDS YP_885023.1 118468230 4537045 complement(689301..689912) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 689912 4537045 MSMEG_0612 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885023.1 689301 R 246196 CDS YP_885024.1 118467455 4536600 689985..690890 1 NC_008596.1 hypothetical protein 690890 4536600 MSMEG_0613 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885024.1 689985 D 246196 CDS YP_885025.1 118473880 4531128 690921..691814 1 NC_008596.1 identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase 691814 4531128 MSMEG_0614 Mycobacterium smegmatis str. MC2 155 methyltransferase YP_885025.1 690921 D 246196 CDS YP_885026.1 118467798 4535974 691998..693767 1 NC_008596.1 identified by match to protein family HMM PF00004; ATPase AAA 693767 4535974 MSMEG_0615 Mycobacterium smegmatis str. MC2 155 ATPase AAA YP_885026.1 691998 D 246196 CDS YP_885027.1 118473477 4531181 693764..695320 1 NC_008596.1 identified by match to protein family HMM PF05108; hypothetical protein 695320 4531181 MSMEG_0616 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885027.1 693764 D 246196 CDS YP_885028.1 118468237 4537422 695317..699294 1 NC_008596.1 identified by match to protein family HMM PF01580; ftsk/SpoIIIE family protein 699294 4537422 MSMEG_0617 Mycobacterium smegmatis str. MC2 155 ftsk/SpoIIIE family protein YP_885028.1 695317 D 246196 CDS YP_885029.1 118470806 4531916 699291..699602 1 NC_008596.1 identified by match to protein family HMM PF00934; PE family protein 699602 4531916 MSMEG_0618 Mycobacterium smegmatis str. MC2 155 PE family protein YP_885029.1 699291 D 246196 CDS YP_885030.1 118468729 4534257 699604..701175 1 NC_008596.1 identified by match to protein family HMM PF00823; PPE family protein 701175 4534257 MSMEG_0619 Mycobacterium smegmatis str. MC2 155 PPE family protein YP_885030.1 699604 D 246196 CDS YP_885031.1 118469490 4534464 701225..701518 1 NC_008596.1 PE family protein 701518 4534464 MSMEG_0620 Mycobacterium smegmatis str. MC2 155 PE family protein YP_885031.1 701225 D 246196 CDS YP_885032.1 118470541 4532995 701553..701840 1 NC_008596.1 low molecular weight protein antigen 7 701840 4532995 MSMEG_0621 Mycobacterium smegmatis str. MC2 155 low molecular weight protein antigen 7 YP_885032.1 701553 D 246196 CDS YP_885033.1 118470815 4531925 701853..702734 1 NC_008596.1 DNA-binding protein 702734 4531925 MSMEG_0622 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_885033.1 701853 D 246196 CDS YP_885034.1 118471932 4536194 702737..704164 1 NC_008596.1 identified by match to protein family HMM PF04600; match to protein family HMM TIGR02958; secretion protein Snm4 704164 snm 4536194 snm Mycobacterium smegmatis str. MC2 155 secretion protein Snm4 YP_885034.1 702737 D 246196 CDS YP_885035.1 118469114 4535326 704172..705551 1 NC_008596.1 identified by match to protein family HMM PF00082; subtilase 705551 4535326 MSMEG_0624 Mycobacterium smegmatis str. MC2 155 subtilase YP_885035.1 704172 D 246196 CDS YP_885036.1 118471713 4536438 705548..706477 1 NC_008596.1 hypothetical protein 706477 4536438 MSMEG_0626 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885036.1 705548 D 246196 CDS YP_885037.1 118470994 4533486 complement(706433..707632) 1 NC_008596.1 hypothetical protein 707632 4533486 MSMEG_0625 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885037.1 706433 R 246196 CDS YP_885038.1 118469142 4532558 complement(707650..709398) 1 NC_008596.1 identified by match to protein family HMM PF02366; glycosyl transferase family protein 709398 4532558 MSMEG_0627 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_885038.1 707650 R 246196 CDS YP_885039.1 118473173 4532575 complement(709441..710328) 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 710328 4532575 MSMEG_0628 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_885039.1 709441 R 246196 CDS YP_885040.1 118469390 4532284 710373..711137 1 NC_008596.1 catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; trans-aconitate 2-methyltransferase 711137 4532284 MSMEG_0629 Mycobacterium smegmatis str. MC2 155 trans-aconitate 2-methyltransferase YP_885040.1 710373 D 246196 CDS YP_885041.1 118467454 4536599 complement(711186..711989) 1 NC_008596.1 hypothetical protein 711989 4536599 MSMEG_0630 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885041.1 711186 R 246196 CDS YP_885042.1 118471895 4536232 complement(713531..714025) 1 NC_008596.1 hypothetical protein 714025 4536232 MSMEG_0632 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885042.1 713531 R 246196 CDS YP_885043.1 118471342 4533226 714093..714764 1 NC_008596.1 identified by match to protein family HMM PF01569; PAP2 superfamily protein 714764 4533226 MSMEG_0634 Mycobacterium smegmatis str. MC2 155 PAP2 superfamily protein YP_885043.1 714093 D 246196 CDS YP_885044.1 118469500 4533327 complement(714718..716181) 1 NC_008596.1 identified by match to protein family HMM PF00781; match to protein family HMM PF01569; PAP2 superfamily protein 716181 4533327 MSMEG_0633 Mycobacterium smegmatis str. MC2 155 PAP2 superfamily protein YP_885044.1 714718 R 246196 CDS YP_885045.1 118473185 4533302 716288..716914 1 NC_008596.1 hypothetical protein 716914 4533302 MSMEG_0635 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885045.1 716288 D 246196 CDS YP_885046.1 118473685 4531082 complement(716920..717405) 1 NC_008596.1 hypothetical protein 717405 4531082 MSMEG_0636 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885046.1 716920 R 246196 CDS YP_885047.1 118471280 4532154 complement(717434..719002) 1 NC_008596.1 identified by match to protein family HMM PF00355; match to protein family HMM PF01266; iron-sulfur binding oxidoreductase 719002 4532154 MSMEG_0637 Mycobacterium smegmatis str. MC2 155 iron-sulfur binding oxidoreductase YP_885047.1 717434 R 246196 CDS YP_885048.1 118469763 4532827 719172..721103 1 NC_008596.1 hypothetical protein 721103 4532827 MSMEG_0638 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885048.1 719172 D 246196 CDS YP_885049.1 118467442 4535451 complement(721104..722114) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; oligopeptide transport ATP-binding protein AppF 722114 4535451 MSMEG_0639 Mycobacterium smegmatis str. MC2 155 oligopeptide transport ATP-binding protein AppF YP_885049.1 721104 R 246196 CDS YP_885050.1 118472922 4531211 complement(722111..723097) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; oligopeptide transport ATP-binding protein OppD 723097 4531211 MSMEG_0640 Mycobacterium smegmatis str. MC2 155 oligopeptide transport ATP-binding protein OppD YP_885050.1 722111 R 246196 CDS YP_885051.1 118471300 4532194 complement(723094..724056) 1 NC_008596.1 identified by match to protein family HMM PF00528; binding-protein-dependent transporters inner membrane component 724056 4532194 MSMEG_0641 Mycobacterium smegmatis str. MC2 155 binding-protein-dependent transporters inner membrane component YP_885051.1 723094 R 246196 CDS YP_885052.1 118469588 4531093 complement(724060..725070) 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 725070 4531093 MSMEG_0642 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_885052.1 724060 R 246196 CDS YP_885053.1 118470335 4534918 complement(725067..726722) 1 NC_008596.1 identified by match to protein family HMM PF00496; extracellular solute-binding protein 726722 4534918 MSMEG_0643 Mycobacterium smegmatis str. MC2 155 extracellular solute-binding protein YP_885053.1 725067 R 246196 CDS YP_885054.1 118468066 4533013 726931..727503 1 NC_008596.1 identified by match to protein family HMM PF07883; cupin 727503 4533013 MSMEG_0644 Mycobacterium smegmatis str. MC2 155 cupin YP_885054.1 726931 D 246196 CDS YP_885055.1 118468277 4535764 727629..728471 1 NC_008596.1 identified by match to protein family HMM PF00722; beta-1,3-glucanase 728471 4535764 MSMEG_0645 Mycobacterium smegmatis str. MC2 155 beta-1,3-glucanase YP_885055.1 727629 D 246196 CDS YP_885056.1 118473495 4532128 complement(728572..730170) 1 NC_008596.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01097; transporter 730170 4532128 MSMEG_0646 Mycobacterium smegmatis str. MC2 155 transporter YP_885056.1 728572 R 246196 CDS YP_885057.1 118467872 4532894 730087..730212 1 NC_008596.1 hypothetical protein 730212 4532894 MSMEG_0648 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885057.1 730087 D 246196 CDS YP_885058.1 118471148 4530938 complement(730167..730958) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR02315; phosphonate ABC transporter ATP-binding protein 730958 phnC 4530938 phnC Mycobacterium smegmatis str. MC2 155 phosphonate ABC transporter ATP-binding protein YP_885058.1 730167 R 246196 CDS YP_885059.1 118471794 4536326 complement(730969..731934) 1 NC_008596.1 identified by match to protein family HMM TIGR01098; phosphonate-binding periplasmic protein 731934 4536326 MSMEG_0649 Mycobacterium smegmatis str. MC2 155 phosphonate-binding periplasmic protein YP_885059.1 730969 R 246196 CDS YP_885060.1 118470468 4536777 732117..732869 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07702; GntR family transcriptional regulator 732869 4536777 MSMEG_0650 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_885060.1 732117 D 246196 CDS YP_885061.1 118469520 4536724 732984..733664 1 NC_008596.1 hypothetical protein 733664 4536724 MSMEG_0651 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885061.1 732984 D 246196 CDS YP_885062.1 118469028 4530880 733710..734573 1 NC_008596.1 hypothetical protein 734573 4530880 MSMEG_0652 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885062.1 733710 D 246196 CDS YP_885063.1 118471074 4537517 complement(735585..736520) 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 736520 4537517 MSMEG_0654 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885063.1 735585 R 246196 CDS YP_885064.1 118470533 4536125 736636..737415 1 NC_008596.1 identified by match to protein family HMM PF00106; glucose 1-dehydrogenase 737415 4536125 MSMEG_0655 Mycobacterium smegmatis str. MC2 155 glucose 1-dehydrogenase YP_885064.1 736636 D 246196 CDS YP_885065.1 118469800 4535941 complement(737416..738018) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 738018 4535941 MSMEG_0656 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885065.1 737416 R 246196 CDS YP_885066.1 118473905 4536971 complement(738064..739248) 1 NC_008596.1 identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein 739248 4536971 MSMEG_0657 Mycobacterium smegmatis str. MC2 155 Rieske (2Fe-2S) domain-containing protein YP_885066.1 738064 R 246196 CDS YP_885067.1 118471306 4534646 complement(739263..740168) 1 NC_008596.1 identified by match to protein family HMM PF00528; polyamine ABC-transporter inner membrane subunit 740168 4534646 MSMEG_0658 Mycobacterium smegmatis str. MC2 155 polyamine ABC-transporter inner membrane subunit YP_885067.1 739263 R 246196 CDS YP_885068.1 118472037 4534119 complement(740165..741106) 1 NC_008596.1 identified by match to protein family HMM PF00528; polyamine ABC transporter permease 741106 4534119 MSMEG_0659 Mycobacterium smegmatis str. MC2 155 polyamine ABC transporter permease YP_885068.1 740165 R 246196 CDS YP_885069.1 118468563 4533697 complement(741111..742385) 1 NC_008596.1 identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409; extracellular solute-binding protein 742385 4533697 MSMEG_0660 Mycobacterium smegmatis str. MC2 155 extracellular solute-binding protein YP_885069.1 741111 R 246196 CDS YP_885070.1 118468020 4533101 742519..743907 1 NC_008596.1 identified by match to protein family HMM PF00202; glutamate-1-semialdehyde 2,1-aminomutase 743907 4533101 MSMEG_0661 Mycobacterium smegmatis str. MC2 155 glutamate-1-semialdehyde 2,1-aminomutase YP_885070.1 742519 D 246196 CDS YP_885071.1 118471705 4536429 743924..745081 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM TIGR01187; putrescine transport ATP-binding protein PotG 745081 4536429 MSMEG_0662 Mycobacterium smegmatis str. MC2 155 putrescine transport ATP-binding protein PotG YP_885071.1 743924 D 246196 CDS YP_885072.1 118469150 4534736 complement(745088..745795) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 745795 4534736 MSMEG_0663 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885072.1 745088 R 246196 CDS YP_885073.1 118469632 4534093 745913..747574 1 NC_008596.1 identified by match to protein family HMM PF01266; FAD dependent oxidoreductase 747574 4534093 MSMEG_0664 Mycobacterium smegmatis str. MC2 155 FAD dependent oxidoreductase YP_885073.1 745913 D 246196 CDS YP_885074.1 118471918 4536219 747619..749646 1 NC_008596.1 identified by match to protein family HMM PF02629; acetyl-CoA synthetase 749646 4536219 MSMEG_0666 Mycobacterium smegmatis str. MC2 155 acetyl-CoA synthetase YP_885074.1 747619 D 246196 CDS YP_885075.1 118469754 4532818 complement(749627..750838) 1 NC_008596.1 identified by match to protein family HMM PF01266; sarcosine oxidase subunit beta 750838 4532818 MSMEG_0665 Mycobacterium smegmatis str. MC2 155 sarcosine oxidase subunit beta YP_885075.1 749627 R 246196 CDS YP_885076.1 118468947 4532610 750914..752092 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; butyryl-CoA dehydrogenase 752092 4532610 MSMEG_0667 Mycobacterium smegmatis str. MC2 155 butyryl-CoA dehydrogenase YP_885076.1 750914 D 246196 CDS YP_885077.1 118467772 4533403 752138..752347 1 NC_008596.1 integral membrane protein 752347 4533403 MSMEG_0668 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_885077.1 752138 D 246196 CDS YP_885078.1 118473112 4531838 752392..753333 1 NC_008596.1 identified by match to protein family HMM PF03486; match to protein family HMM PF07992; FAD dependent oxidoreductase 753333 4531838 MSMEG_0670 Mycobacterium smegmatis str. MC2 155 FAD dependent oxidoreductase YP_885078.1 752392 D 246196 CDS YP_885079.1 118473728 4536962 complement(753330..753836) 1 NC_008596.1 hypothetical protein 753836 4536962 MSMEG_0669 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885079.1 753330 R 246196 CDS YP_885080.1 118469314 4533379 complement(753920..755068) 1 NC_008596.1 identified by match to protein family HMM PF00107; S-(hydroxymethyl)glutathione dehydrogenase 755068 4533379 MSMEG_0671 Mycobacterium smegmatis str. MC2 155 S-(hydroxymethyl)glutathione dehydrogenase YP_885080.1 753920 R 246196 CDS YP_885081.1 118467387 4533858 complement(755161..755814) 1 NC_008596.1 hypothetical protein 755814 4533858 MSMEG_0672 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885081.1 755161 R 246196 CDS YP_885082.1 118471215 4533817 complement(755982..756524) 1 NC_008596.1 hypothetical protein 756524 4533817 MSMEG_0673 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885082.1 755982 R 246196 CDS YP_885083.1 118474030 4533443 complement(756845..757855) 1 NC_008596.1 identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 757855 4533443 MSMEG_0674 Mycobacterium smegmatis str. MC2 155 ErfK/YbiS/YcfS/YnhG family protein YP_885083.1 756845 R 246196 CDS YP_885084.1 118472111 4537492 complement(758055..759272) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 759272 4537492 MSMEG_0675 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_885084.1 758055 R 246196 CDS YP_885085.1 118467465 4536610 759460..759996 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulatory protein 759996 4536610 MSMEG_0676 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_885085.1 759460 D 246196 CDS YP_885086.1 118469785 4535809 760192..760761 1 NC_008596.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 760761 dcd 4535809 dcd Mycobacterium smegmatis str. MC2 155 deoxycytidine triphosphate deaminase YP_885086.1 760192 D 246196 CDS YP_885087.1 118472489 4532440 761054..762742 1 NC_008596.1 hypothetical protein 762742 4532440 MSMEG_0679 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885087.1 761054 D 246196 CDS YP_885088.1 118472352 4531603 762836..764170 1 NC_008596.1 identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; UDP-glucose 6-dehydrogenase 764170 4531603 MSMEG_0680 Mycobacterium smegmatis str. MC2 155 UDP-glucose 6-dehydrogenase YP_885088.1 762836 D 246196 CDS YP_885089.1 118468531 4535356 764248..765516 1 NC_008596.1 identified by match to protein family HMM PF00067; P450 heme-thiolate protein 765516 4535356 MSMEG_0681 Mycobacterium smegmatis str. MC2 155 P450 heme-thiolate protein YP_885089.1 764248 D 246196 CDS YP_885090.1 118471045 4536747 765518..766270 1 NC_008596.1 identified by match to protein family HMM PF07398; match to protein family HMM TIGR03083; hypothetical protein 766270 4536747 MSMEG_0682 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885090.1 765518 D 246196 CDS YP_885091.1 118468757 4534246 766289..766657 1 NC_008596.1 hypothetical protein 766657 4534246 MSMEG_0683 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885091.1 766289 D 246196 CDS YP_885092.1 118467971 4535153 complement(766670..768784) 1 NC_008596.1 identified by match to protein family HMM PF01315; match to protein family HMM PF02738; aldehyde oxidase 768784 4535153 MSMEG_0684 Mycobacterium smegmatis str. MC2 155 aldehyde oxidase YP_885092.1 766670 R 246196 CDS YP_885093.1 118472547 4532674 complement(768781..769776) 1 NC_008596.1 identified by match to protein family HMM PF00941; match to protein family HMM PF03450; oxidoreductase, molybdopterin-binding subunit 769776 4532674 MSMEG_0685 Mycobacterium smegmatis str. MC2 155 oxidoreductase, molybdopterin-binding subunit YP_885093.1 768781 R 246196 CDS YP_885094.1 118469258 4531551 complement(769773..770294) 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF01799; oxidoreductase 770294 4531551 MSMEG_0686 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_885094.1 769773 R 246196 CDS YP_885095.1 118473770 4537746 complement(770334..771569) 1 NC_008596.1 identified by match to protein family HMM PF07907; hypothetical protein 771569 4537746 MSMEG_0687 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885095.1 770334 R 246196 CDS YP_885096.1 118471384 4534978 complement(771588..772862) 1 NC_008596.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase 772862 4534978 MSMEG_0688 Mycobacterium smegmatis str. MC2 155 aminotransferase YP_885096.1 771588 R 246196 CDS YP_885097.1 118469219 4533273 773110..773346 1 NC_008596.1 hypothetical protein 773346 4533273 MSMEG_0689 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885097.1 773110 D 246196 CDS YP_885098.1 118471642 4536518 complement(773427..776555) 1 NC_008596.1 identified by match to protein family HMM PF00037; match to protein family HMM PF02754; (Fe-S)-binding protein 776555 4536518 MSMEG_0690 Mycobacterium smegmatis str. MC2 155 (Fe-S)-binding protein YP_885098.1 773427 R 246196 CDS YP_885099.1 118470595 4532097 complement(776854..779364) 1 NC_008596.1 identified by match to protein family HMM PF00196; transcriptional regulatory protein 779364 4532097 MSMEG_0691 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_885099.1 776854 R 246196 CDS YP_885100.1 118468356 4533955 complement(779379..781166) 1 NC_008596.1 hypothetical protein 781166 4533955 MSMEG_0692 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885100.1 779379 R 246196 CDS YP_885101.1 118470928 4533976 781358..781909 1 NC_008596.1 hypothetical protein 781909 4533976 MSMEG_0693 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885101.1 781358 D 246196 CDS YP_885102.1 118467676 4536942 783439..785247 1 NC_008596.1 isoniazid inductible protein IniA 785247 4536942 MSMEG_0695 Mycobacterium smegmatis str. MC2 155 isoniazid inductible protein IniA YP_885102.1 783439 D 246196 CDS YP_885103.1 118467748 4535648 complement(785252..785593) 1 NC_008596.1 hypothetical protein 785593 4535648 MSMEG_0696 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885103.1 785252 R 246196 CDS YP_885104.1 118473646 4533514 complement(785583..785996) 1 NC_008596.1 identified by match to protein family HMM PF07332; integral membrane protein 785996 4533514 MSMEG_0697 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_885104.1 785583 R 246196 CDS YP_885105.1 118468589 4532716 786166..787659 1 NC_008596.1 isoniazid inductible protein IniC 787659 4532716 MSMEG_0698 Mycobacterium smegmatis str. MC2 155 isoniazid inductible protein IniC YP_885105.1 786166 D 246196 CDS YP_885106.1 118473591 4534864 787715..789565 1 NC_008596.1 hypothetical protein 789565 4534864 MSMEG_0699 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885106.1 787715 D 246196 CDS YP_885107.1 118467888 4535264 complement(789578..790090) 1 NC_008596.1 hypothetical protein 790090 4535264 MSMEG_0700 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885107.1 789578 R 246196 CDS YP_885108.1 118473415 4537402 790135..790428 1 NC_008596.1 hypothetical protein 790428 4537402 MSMEG_0701 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885108.1 790135 D 246196 CDS YP_885109.1 118470078 4535971 complement(790621..791553) 1 NC_008596.1 identified by match to protein family HMM PF00296; monooxygenase 791553 4535971 MSMEG_0702 Mycobacterium smegmatis str. MC2 155 monooxygenase YP_885109.1 790621 R 246196 CDS YP_885110.1 118470988 4531908 complement(791573..792196) 1 NC_008596.1 identified by match to protein family HMM TIGR03083; match to protein family HMM TIGR03085; hypothetical protein 792196 4531908 MSMEG_0703 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885110.1 791573 R 246196 CDS YP_885111.1 118471374 4535281 complement(792264..792803) 1 NC_008596.1 LpqJ protein 792803 4535281 MSMEG_0704 Mycobacterium smegmatis str. MC2 155 LpqJ protein YP_885111.1 792264 R 246196 CDS YP_885112.1 118468065 4533012 complement(792856..794181) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; permease of the major facilitator superfamily protein 794181 4533012 MSMEG_0705 Mycobacterium smegmatis str. MC2 155 permease of the major facilitator superfamily protein YP_885112.1 792856 R 246196 CDS YP_885113.1 118470768 4531131 complement(794200..794811) 1 NC_008596.1 identified by match to protein family HMM PF03737; 4-carboxy-4-hydroxy-2-oxoadipate aldolase 794811 4531131 MSMEG_0706 Mycobacterium smegmatis str. MC2 155 4-carboxy-4-hydroxy-2-oxoadipate aldolase YP_885113.1 794200 R 246196 CDS YP_885114.1 118471809 4536341 complement(794808..795467) 1 NC_008596.1 identified by similarity to GB:CAD18384.1; match to protein family HMM PF03737; hypothetical protein 795467 4536341 MSMEG_0707 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885114.1 794808 R 246196 CDS YP_885115.1 118471663 4536462 795587..796540 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 796540 4536462 MSMEG_0708 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_885115.1 795587 D 246196 CDS YP_885116.1 118472423 4532040 796766..798634 1 NC_008596.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 798634 dnaK 4532040 dnaK Mycobacterium smegmatis str. MC2 155 molecular chaperone DnaK YP_885116.1 796766 D 246196 CDS YP_885117.1 118468522 4535347 798631..799281 1 NC_008596.1 identified by match to protein family HMM PF01025; co-chaperone GrpE 799281 grpE 4535347 grpE Mycobacterium smegmatis str. MC2 155 co-chaperone GrpE YP_885117.1 798631 D 246196 CDS YP_885118.1 118470348 4534931 799323..800495 1 NC_008596.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 800495 dnaJ 4534931 dnaJ Mycobacterium smegmatis str. MC2 155 molecular chaperone DnaJ YP_885118.1 799323 D 246196 CDS YP_885119.1 118468115 4535613 800492..800851 1 NC_008596.1 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 800851 4535613 MSMEG_0713 Mycobacterium smegmatis str. MC2 155 MerR family transcriptional regulator YP_885119.1 800492 D 246196 CDS YP_885120.1 118468297 4533055 complement(800848..801438) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 801438 4533055 MSMEG_0712 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885120.1 800848 R 246196 CDS YP_885121.1 118469793 4535933 complement(801516..802700) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 802700 4535933 MSMEG_0714 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_885121.1 801516 R 246196 CDS YP_885122.1 118467710 4537718 complement(802729..803472) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; 3-oxoacyl-ACP reductase 803472 4537718 MSMEG_0715 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_885122.1 802729 R 246196 CDS YP_885123.1 118472656 4535076 803662..804960 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily protein 804960 4535076 MSMEG_0716 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_885123.1 803662 D 246196 CDS YP_885124.1 118468765 4534254 804960..806609 1 NC_008596.1 identified by match to protein family HMM PF00501; acetyl-CoA synthetase 806609 4534254 MSMEG_0718 Mycobacterium smegmatis str. MC2 155 acetyl-CoA synthetase YP_885124.1 804960 D 246196 CDS YP_885125.1 118470689 4531752 complement(806596..807498) 1 NC_008596.1 identified by match to protein family HMM PF01263; aldose 1-epimerase 807498 4531752 MSMEG_0717 Mycobacterium smegmatis str. MC2 155 aldose 1-epimerase YP_885125.1 806596 R 246196 CDS YP_885126.1 118470480 4537164 complement(807543..808682) 1 NC_008596.1 identified by match to protein family HMM PF00042; match to protein family HMM PF00175; match to protein family HMM PF00970; flavohemoprotein 808682 4537164 MSMEG_0719 Mycobacterium smegmatis str. MC2 155 flavohemoprotein YP_885126.1 807543 R 246196 CDS YP_885127.1 118471907 4536207 complement(808724..809722) 1 NC_008596.1 integral membrane protein 809722 4536207 MSMEG_0720 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_885127.1 808724 R 246196 CDS YP_885128.1 118468817 4534073 complement(810514..811017) 1 NC_008596.1 hypothetical protein 811017 4534073 MSMEG_0722 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885128.1 810514 R 246196 CDS YP_885129.1 118468981 4535091 complement(811187..811729) 1 NC_008596.1 hypothetical protein 811729 4535091 MSMEG_0723 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885129.1 811187 R 246196 CDS YP_885130.1 118468019 4533100 811835..812161 1 NC_008596.1 similar at the nucleotide level to IS1137 in the IS Finder database.; identified by match to protein family HMM PF01527; IS1137, transposase orfA 812161 4533100 MSMEG_0724 Mycobacterium smegmatis str. MC2 155 IS1137, transposase orfA YP_885130.1 811835 D 246196 CDS YP_885131.1 118467838 4535465 812164..813117 1 NC_008596.1 similar at the nucleotide level to IS1137 in the IS Finder database.; identified by match to protein family HMM PF00665; IS1137, transposase orfB 813117 4535465 MSMEG_0725 Mycobacterium smegmatis str. MC2 155 IS1137, transposase orfB YP_885131.1 812164 D 246196 CDS YP_885132.1 118469550 4537496 complement(813145..813267) 1 NC_008596.1 hypothetical protein 813267 4537496 MSMEG_0726 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885132.1 813145 R 246196 CDS YP_885133.1 118470698 4532535 complement(813749..814006) 1 NC_008596.1 hypothetical protein 814006 4532535 MSMEG_0727 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885133.1 813749 R 246196 CDS YP_885134.1 118471720 4536406 complement(814372..814680) 1 NC_008596.1 hypothetical protein 814680 4536406 MSMEG_0728 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885134.1 814372 R 246196 CDS YP_885135.1 118472749 4531938 complement(814904..815572) 1 NC_008596.1 hypothetical protein 815572 4531938 MSMEG_0729 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885135.1 814904 R 246196 CDS YP_885136.1 118472832 4537056 complement(815642..816844) 1 NC_008596.1 identified by match to protein family HMM PF00201; match to protein family HMM TIGR01426; oleandomycin glycosyltransferase 816844 4537056 MSMEG_0730 Mycobacterium smegmatis str. MC2 155 oleandomycin glycosyltransferase YP_885136.1 815642 R 246196 CDS YP_885137.1 118470067 4535960 complement(816851..817474) 1 NC_008596.1 hypothetical protein 817474 4535960 MSMEG_0731 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885137.1 816851 R 246196 CDS YP_885138.1 118470039 4531654 817638..820184 1 NC_008596.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; chaperone ClpB 820184 4531654 MSMEG_0732 Mycobacterium smegmatis str. MC2 155 chaperone ClpB YP_885138.1 817638 D 246196 CDS YP_885139.1 118471349 4533233 complement(820263..821342) 1 NC_008596.1 identified by match to protein family HMM PF01113; dihydrodipicolinate reductase N-terminus domain-containing protein 821342 dapB 4533233 dapB Mycobacterium smegmatis str. MC2 155 dihydrodipicolinate reductase N-terminus domain-containing protein YP_885139.1 820263 R 246196 CDS YP_885140.1 118472866 4531350 complement(821339..822418) 1 NC_008596.1 identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein 822418 4531350 MSMEG_0734 Mycobacterium smegmatis str. MC2 155 Rieske (2Fe-2S) domain-containing protein YP_885140.1 821339 R 246196 CDS YP_885141.1 118467623 4533085 822502..823164 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 823164 4533085 MSMEG_0735 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_885141.1 822502 D 246196 CDS YP_885142.1 118470708 4532545 823231..824067 1 NC_008596.1 hypothetical protein 824067 4532545 MSMEG_0736 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885142.1 823231 D 246196 CDS YP_885143.1 118471673 4536474 824113..824889 1 NC_008596.1 identified by match to protein family HMM PF00106; dehydrogenase 824889 4536474 MSMEG_0737 Mycobacterium smegmatis str. MC2 155 dehydrogenase YP_885143.1 824113 D 246196 CDS YP_885144.1 118469952 4530915 824920..825822 1 NC_008596.1 hypothetical protein 825822 4530915 MSMEG_0738 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885144.1 824920 D 246196 CDS YP_885145.1 118468653 4535229 825815..826459 1 NC_008596.1 identified by match to protein family HMM PF00588; spou rRNA methylase 826459 4535229 MSMEG_0739 Mycobacterium smegmatis str. MC2 155 spou rRNA methylase YP_885145.1 825815 D 246196 CDS YP_885146.1 118471514 4537225 826475..827656 1 NC_008596.1 identified by match to protein family HMM PF03663; glycosyl hydrolase 827656 4537225 MSMEG_0740 Mycobacterium smegmatis str. MC2 155 glycosyl hydrolase YP_885146.1 826475 D 246196 CDS YP_885147.1 118472283 4534809 827660..828568 1 NC_008596.1 hypothetical protein 828568 4534809 MSMEG_0741 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885147.1 827660 D 246196 CDS YP_885148.1 118472923 4531212 complement(828573..829526) 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulatory protein 829526 4531212 MSMEG_0742 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_885148.1 828573 R 246196 CDS YP_885149.1 118467467 4536612 829538..830698 1 NC_008596.1 identified by match to protein family HMM PF02625; xanthine dehydrogenase 830698 4536612 MSMEG_0743 Mycobacterium smegmatis str. MC2 155 xanthine dehydrogenase YP_885149.1 829538 D 246196 CDS YP_885150.1 118473300 4535171 830754..831644 1 NC_008596.1 identified by match to protein family HMM PF00941; match to protein family HMM PF03450; carbon monoxide dehydrogenase 831644 4535171 MSMEG_0744 Mycobacterium smegmatis str. MC2 155 carbon monoxide dehydrogenase YP_885150.1 830754 D 246196 CDS YP_885151.1 118469009 4536060 831647..832123 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF01799; 2Fe-2S-binding domain-containing protein 832123 4536060 MSMEG_0745 Mycobacterium smegmatis str. MC2 155 2Fe-2S-binding domain-containing protein YP_885151.1 831647 D 246196 CDS YP_885152.1 118467964 4532076 832120..834519 1 NC_008596.1 identified by match to protein family HMM PF01315; match to protein family HMM PF02738; match to protein family HMM TIGR02416; carbon-monoxide dehydrogenase, large subunit 834519 4532076 MSMEG_0746 Mycobacterium smegmatis str. MC2 155 carbon-monoxide dehydrogenase, large subunit YP_885152.1 832120 D 246196 CDS YP_885153.1 118471343 4533227 834538..835275 1 NC_008596.1 identified by match to protein family HMM PF02625; carbon monoxide dehydrogenase F protein 835275 4533227 MSMEG_0747 Mycobacterium smegmatis str. MC2 155 carbon monoxide dehydrogenase F protein YP_885153.1 834538 D 246196 CDS YP_885154.1 118468110 4535608 835259..836161 1 NC_008596.1 identified by match to protein family HMM PF00004; match to protein family HMM PF07726; match to protein family HMM PF07728; ATPase 836161 4535608 MSMEG_0748 Mycobacterium smegmatis str. MC2 155 ATPase YP_885154.1 835259 D 246196 CDS YP_885155.1 118471035 4536737 836174..836869 1 NC_008596.1 identified by match to protein family HMM PF06240; carbon monoxide dehydrogenase subunit G (CoxG) family protein 836869 4536737 MSMEG_0749 Mycobacterium smegmatis str. MC2 155 carbon monoxide dehydrogenase subunit G (CoxG) family protein YP_885155.1 836174 D 246196 CDS YP_885156.1 118472831 4537055 836866..838059 1 NC_008596.1 identified by match to protein family HMM PF05762; hypothetical protein 838059 4537055 MSMEG_0751 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885156.1 836866 D 246196 CDS YP_885157.1 118469253 4531545 complement(838056..838778) 1 NC_008596.1 membrane protein 838778 4531545 MSMEG_0750 Mycobacterium smegmatis str. MC2 155 membrane protein YP_885157.1 838056 R 246196 CDS YP_885158.1 118469861 4530899 838859..839896 1 NC_008596.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 839896 fbaA 4530899 fbaA Mycobacterium smegmatis str. MC2 155 fructose-bisphosphate aldolase YP_885158.1 838859 D 246196 CDS YP_885159.1 118473560 4530994 complement(839930..840730) 1 NC_008596.1 hypothetical protein 840730 4530994 MSMEG_0753 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885159.1 839930 R 246196 CDS YP_885160.1 118472635 4537654 840804..841211 1 NC_008596.1 hypothetical protein 841211 4537654 MSMEG_0754 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885160.1 840804 D 246196 CDS YP_885161.1 118470723 4533938 complement(841222..842115) 1 NC_008596.1 identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cobalt-zinc-cadmium resistance protein 842115 4533938 MSMEG_0755 Mycobacterium smegmatis str. MC2 155 cobalt-zinc-cadmium resistance protein YP_885161.1 841222 R 246196 CDS YP_885162.1 118473660 4531231 842208..842702 1 NC_008596.1 hypothetical protein 842702 4531231 MSMEG_0757 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885162.1 842208 D 246196 CDS YP_885163.1 118472331 4534222 complement(842699..843478) 1 NC_008596.1 identified by match to protein family HMM PF02163; peptidase, M50B family protein 843478 4534222 MSMEG_0756 Mycobacterium smegmatis str. MC2 155 peptidase, M50B family protein YP_885163.1 842699 R 246196 CDS YP_885164.1 118473507 4533869 complement(843524..844063) 1 NC_008596.1 hypothetical protein 844063 4533869 MSMEG_0758 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885164.1 843524 R 246196 CDS YP_885165.1 118472725 4532353 844214..845509 1 NC_008596.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 845509 purA 4532353 purA Mycobacterium smegmatis str. MC2 155 adenylosuccinate synthetase YP_885165.1 844214 D 246196 CDS YP_885166.1 118470811 4531921 845509..846159 1 NC_008596.1 identified by match to protein family HMM PF03061; thioesterase 846159 4531921 MSMEG_0760 Mycobacterium smegmatis str. MC2 155 thioesterase YP_885166.1 845509 D 246196 CDS YP_885167.1 118469801 4535942 complement(846166..846360) 1 NC_008596.1 hypothetical protein 846360 4535942 MSMEG_0761 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885167.1 846166 R 246196 CDS YP_885168.1 118471637 4536512 complement(846366..847571) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 847571 4536512 MSMEG_0762 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_885168.1 846366 R 246196 CDS YP_885169.1 118472878 4531362 complement(847627..849621) 1 NC_008596.1 identified by match to protein family HMM PF03176; antibiotic transporter 849621 4531362 MSMEG_0763 Mycobacterium smegmatis str. MC2 155 antibiotic transporter YP_885169.1 847627 R 246196 CDS YP_885170.1 118473794 4531273 complement(849626..851209) 1 NC_008596.1 identified by match to protein family HMM PF00999; match to protein family HMM TIGR00831; Na+/H+ antiporter 851209 4531273 MSMEG_0764 Mycobacterium smegmatis str. MC2 155 Na+/H+ antiporter YP_885170.1 849626 R 246196 CDS YP_885171.1 118473531 4533631 851254..851556 1 NC_008596.1 hypothetical protein 851556 4533631 MSMEG_0765 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885171.1 851254 D 246196 CDS YP_885172.1 118472682 4532947 851580..852980 1 NC_008596.1 identified by match to protein family HMM PF02222; phosphoribosylglycinamide formyltransferase 2 852980 purT 4532947 purT Mycobacterium smegmatis str. MC2 155 phosphoribosylglycinamide formyltransferase 2 YP_885172.1 851580 D 246196 CDS YP_885173.1 118467448 4535457 852984..853469 1 NC_008596.1 hypothetical protein 853469 4535457 MSMEG_0767 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885173.1 852984 D 246196 CDS YP_885174.1 118469737 4532022 853466..853876 1 NC_008596.1 hypothetical protein 853876 4532022 MSMEG_0768 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885174.1 853466 D 246196 CDS YP_885175.1 118468205 4536647 853886..855103 1 NC_008596.1 identified by match to protein family HMM PF01053; match to protein family HMM TIGR01325; O-succinylhomoserine sulfhydrylase 855103 metZ 4536647 metZ Mycobacterium smegmatis str. MC2 155 O-succinylhomoserine sulfhydrylase YP_885175.1 853886 D 246196 CDS YP_885176.1 118467396 4535817 855107..855514 1 NC_008596.1 hypothetical protein 855514 4535817 MSMEG_0770 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885176.1 855107 D 246196 CDS YP_885177.1 118470236 4536755 complement(855584..856444) 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 856444 4536755 MSMEG_0771 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_885177.1 855584 R 246196 CDS YP_885178.1 118471169 4534955 complement(856524..857672) 1 NC_008596.1 phytase 857672 4534955 MSMEG_0772 Mycobacterium smegmatis str. MC2 155 phytase YP_885178.1 856524 R 246196 CDS YP_885179.1 118474011 4530971 857779..858309 1 NC_008596.1 identified by match to protein family HMM PF00583; acetyltransferase 858309 4530971 MSMEG_0773 Mycobacterium smegmatis str. MC2 155 acetyltransferase YP_885179.1 857779 D 246196 CDS YP_885180.1 118468014 4533095 859468..859779 1 NC_008596.1 hypothetical protein 859779 4533095 MSMEG_0776 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885180.1 859468 D 246196 CDS YP_885181.1 118473438 4534129 complement(859776..860522) 1 NC_008596.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 860522 4534129 MSMEG_0775 Mycobacterium smegmatis str. MC2 155 metallo-beta-lactamase superfamily protein YP_885181.1 859776 R 246196 CDS YP_885182.1 118472894 4534037 860554..861567 1 NC_008596.1 identified by match to protein family HMM PF00296; F420-dependent glucose-6-phosphate dehydrogenase 861567 4534037 MSMEG_0777 Mycobacterium smegmatis str. MC2 155 F420-dependent glucose-6-phosphate dehydrogenase YP_885182.1 860554 D 246196 CDS YP_885183.1 118469920 4535574 complement(861746..862510) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07702; transcriptional regulator 862510 4535574 MSMEG_0778 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_885183.1 861746 R 246196 CDS YP_885184.1 118468825 4534081 complement(862519..863295) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; short chain dehydrogenase 863295 4534081 MSMEG_0779 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_885184.1 862519 R 246196 CDS YP_885185.1 118467580 4532870 complement(863307..864413) 1 NC_008596.1 identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein 864413 4532870 MSMEG_0780 Mycobacterium smegmatis str. MC2 155 phosphotransferase enzyme family protein YP_885185.1 863307 R 246196 CDS YP_885186.1 118469149 4534735 864599..866176 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 866176 4534735 MSMEG_0781 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_885186.1 864599 D 246196 CDS YP_885187.1 118469652 4535062 866234..867556 1 NC_008596.1 identified by match to protein family HMM PF00202; class III aminotransferase 867556 4535062 MSMEG_0782 Mycobacterium smegmatis str. MC2 155 class III aminotransferase YP_885187.1 866234 D 246196 CDS YP_885188.1 118473540 4533640 867578..869656 1 NC_008596.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 869656 pta 4533640 pta Mycobacterium smegmatis str. MC2 155 phosphate acetyltransferase YP_885188.1 867578 D 246196 CDS YP_885189.1 118472723 4531693 869653..870783 1 NC_008596.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 870783 ackA 4531693 ackA Mycobacterium smegmatis str. MC2 155 acetate kinase YP_885189.1 869653 D 246196 CDS YP_885190.1 118468415 4534557 complement(870902..871771) 1 NC_008596.1 hypothetical protein 871771 4534557 MSMEG_0785 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885190.1 870902 R 246196 CDS YP_885191.1 118468912 4537074 complement(872016..874298) 1 NC_008596.1 identified by match to protein family HMM PF00069; serine/threonine protein kinase 874298 4537074 MSMEG_0786 Mycobacterium smegmatis str. MC2 155 serine/threonine protein kinase YP_885191.1 872016 R 246196 CDS YP_885192.1 118468998 4535108 complement(874298..875266) 1 NC_008596.1 identified by match to protein family HMM PF00497; extracellular solute-binding protein 875266 4535108 MSMEG_0787 Mycobacterium smegmatis str. MC2 155 extracellular solute-binding protein YP_885192.1 874298 R 246196 CDS YP_885193.1 118470854 4534309 complement(875362..876675) 1 NC_008596.1 hypothetical protein 876675 4534309 MSMEG_0788 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885193.1 875362 R 246196 CDS YP_885194.1 118469744 4532029 876862..877341 1 NC_008596.1 identified by match to protein family HMM PF00293; NUDIX family hydrolase 877341 4532029 MSMEG_0790 Mycobacterium smegmatis str. MC2 155 NUDIX family hydrolase YP_885194.1 876862 D 246196 CDS YP_885195.1 118467945 4533425 complement(877325..878008) 1 NC_008596.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase 878008 thiE 4533425 thiE Mycobacterium smegmatis str. MC2 155 thiamine-phosphate pyrophosphorylase YP_885195.1 877325 R 246196 CDS YP_885196.1 118470194 4530829 878147..879151 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM TIGR02352; glycine oxidase ThiO 879151 thiO 4530829 thiO Mycobacterium smegmatis str. MC2 155 glycine oxidase ThiO YP_885196.1 878147 D 246196 CDS YP_885197.1 118472483 4532434 879148..879348 1 NC_008596.1 with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS 879348 thiS 4532434 thiS Mycobacterium smegmatis str. MC2 155 sulfur carrier protein ThiS YP_885197.1 879148 D 246196 CDS YP_885198.1 118469300 4532639 879341..880099 1 NC_008596.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 880099 thiG 4532639 thiG Mycobacterium smegmatis str. MC2 155 thiazole synthase YP_885198.1 879341 D 246196 CDS YP_885199.1 118471196 4531490 880120..880869 1 NC_008596.1 hypothetical protein 880869 4531490 MSMEG_0794 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885199.1 880120 D 246196 CDS YP_885200.1 118472181 4533719 880883..881794 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 881794 4533719 MSMEG_0795 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_885200.1 880883 D 246196 CDS YP_885201.1 118472872 4531356 881791..882549 1 NC_008596.1 ABC transporter 882549 4531356 MSMEG_0796 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_885201.1 881791 D 246196 CDS YP_885202.1 118468745 4534273 885068..885736 1 NC_008596.1 hypothetical protein 885736 4534273 MSMEG_0798 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885202.1 885068 D 246196 CDS YP_885203.1 118473980 4531424 885893..886069 1 NC_008596.1 hypothetical protein 886069 4531424 MSMEG_0799 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885203.1 885893 D 246196 CDS YP_885204.1 118471333 4534846 886332..886511 1 NC_008596.1 hypothetical protein 886511 4534846 MSMEG_0800 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885204.1 886332 D 246196 CDS YP_885205.1 118469691 4536824 886821..887522 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 887522 4536824 MSMEG_0801 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_885205.1 886821 D 246196 CDS YP_885206.1 118469525 4536729 complement(887530..888852) 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 888852 4536729 MSMEG_0802 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_885206.1 887530 R 246196 CDS YP_885207.1 118468352 4533951 888571..889056 1 NC_008596.1 hypothetical protein 889056 4533951 MSMEG_0803 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885207.1 888571 D 246196 CDS YP_885208.1 118469540 4537114 complement(889186..889623) 1 NC_008596.1 hypothetical protein 889623 4537114 MSMEG_0804 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885208.1 889186 R 246196 CDS YP_885209.1 118471934 4536196 889631..890662 1 NC_008596.1 hypothetical protein 890662 4536196 MSMEG_0805 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885209.1 889631 D 246196 CDS YP_885210.1 118468172 4535044 890643..892154 1 NC_008596.1 identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389; hydrolase 892154 4535044 MSMEG_0806 Mycobacterium smegmatis str. MC2 155 hydrolase YP_885210.1 890643 D 246196 CDS YP_885211.1 118468703 4534693 892151..893602 1 NC_008596.1 identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389; leupeptin-inactivating enzyme 1 893602 4534693 MSMEG_0807 Mycobacterium smegmatis str. MC2 155 leupeptin-inactivating enzyme 1 YP_885211.1 892151 D 246196 CDS YP_885212.1 118467422 4536038 893674..894762 1 NC_008596.1 identified by match to protein family HMM PF00195; match to protein family HMM PF02797; chalcone synthase Pks10 894762 4536038 MSMEG_0808 Mycobacterium smegmatis str. MC2 155 chalcone synthase Pks10 YP_885212.1 893674 D 246196 CDS YP_885213.1 118467589 4531405 894762..895265 1 NC_008596.1 identified by match to protein family HMM PF04140; isoprenylcysteine carboxyl methyltransferase 895265 4531405 MSMEG_0809 Mycobacterium smegmatis str. MC2 155 isoprenylcysteine carboxyl methyltransferase YP_885213.1 894762 D 246196 CDS YP_885214.1 118472392 4531802 895262..896290 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01494; oxidoreductase 896290 4531802 MSMEG_0811 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_885214.1 895262 D 246196 CDS YP_885215.1 118471084 4537527 complement(896271..897566) 1 NC_008596.1 identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; pyrimidine permease RutG 897566 4537527 MSMEG_0810 Mycobacterium smegmatis str. MC2 155 pyrimidine permease RutG YP_885215.1 896271 R 246196 CDS YP_885216.1 118467844 4535471 complement(897612..898832) 1 NC_008596.1 identified by match to protein family HMM PF00324; match to protein family HMM PF01490; amino acid transporter 898832 4535471 MSMEG_0812 Mycobacterium smegmatis str. MC2 155 amino acid transporter YP_885216.1 897612 R 246196 CDS YP_885217.1 118472754 4531943 complement(898848..899174) 1 NC_008596.1 hypothetical protein 899174 4531943 MSMEG_0813 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885217.1 898848 R 246196 CDS YP_885218.1 118469469 4535732 899192..900652 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 900652 4535732 MSMEG_0815 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885218.1 899192 D 246196 CDS YP_885219.1 118470661 4534670 complement(900619..900891) 1 NC_008596.1 membrane protein 900891 4534670 MSMEG_0814 Mycobacterium smegmatis str. MC2 155 membrane protein YP_885219.1 900619 R 246196 CDS YP_885220.1 118471553 4532201 complement(900908..902392) 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF07992; flavin-binding monooxygenase 902392 4532201 MSMEG_0816 Mycobacterium smegmatis str. MC2 155 flavin-binding monooxygenase YP_885220.1 900908 R 246196 CDS YP_885221.1 118468231 4537416 902464..903387 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 903387 4537416 MSMEG_0817 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_885221.1 902464 D 246196 CDS YP_885222.1 118467609 4533071 903499..904851 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; transporter major facilitator family protein 904851 4533071 MSMEG_0818 Mycobacterium smegmatis str. MC2 155 transporter major facilitator family protein YP_885222.1 903499 D 246196 CDS YP_885223.1 118471965 4536150 904883..906142 1 NC_008596.1 identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879; N-carbamoyl-L-amino acid amidohydrolase 906142 4536150 MSMEG_0819 Mycobacterium smegmatis str. MC2 155 N-carbamoyl-L-amino acid amidohydrolase YP_885223.1 904883 D 246196 CDS YP_885224.1 118473973 4533044 906142..907605 1 NC_008596.1 identified by match to protein family HMM PF01425; glutamyl-tRNA(Gln) amidotransferase subunit A 907605 4533044 MSMEG_0821 Mycobacterium smegmatis str. MC2 155 glutamyl-tRNA(Gln) amidotransferase subunit A YP_885224.1 906142 D 246196 CDS YP_885225.1 118471323 4534836 complement(907599..907868) 1 NC_008596.1 hypothetical protein 907868 4534836 MSMEG_0820 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885225.1 907599 R 246196 CDS YP_885226.1 118472064 4536704 complement(907874..909241) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 909241 4536704 MSMEG_0822 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_885226.1 907874 R 246196 CDS YP_885227.1 118473136 4531197 complement(909288..909842) 1 NC_008596.1 hypothetical protein 909842 4531197 MSMEG_0823 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885227.1 909288 R 246196 CDS YP_885228.1 118468351 4533950 complement(909845..910492) 1 NC_008596.1 hypothetical protein 910492 4533950 MSMEG_0824 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885228.1 909845 R 246196 CDS YP_885229.1 118470193 4530828 complement(910482..911318) 1 NC_008596.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase 911318 thiD 4530828 thiD Mycobacterium smegmatis str. MC2 155 phosphomethylpyrimidine kinase YP_885229.1 910482 R 246196 CDS YP_885230.1 118467543 4536005 complement(911327..912901) 1 NC_008596.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 912901 thiC 4536005 thiC Mycobacterium smegmatis str. MC2 155 thiamine biosynthesis protein ThiC YP_885230.1 911327 R 246196 CDS YP_885231.1 118473773 4535130 913283..915019 1 NC_008596.1 identified by match to protein family HMM PF07690; major facilitator superfamily protein 915019 4535130 MSMEG_0827 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_885231.1 913283 D 246196 CDS YP_885232.1 118472077 4537086 complement(915135..916205) 1 NC_008596.1 immunogenic protein MPT63 916205 4537086 MSMEG_0828 Mycobacterium smegmatis str. MC2 155 immunogenic protein MPT63 YP_885232.1 915135 R 246196 CDS YP_885233.1 118472074 4536714 complement(916410..917192) 1 NC_008596.1 identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 917192 xth 4536714 xth Mycobacterium smegmatis str. MC2 155 exodeoxyribonuclease III YP_885233.1 916410 R 246196 CDS YP_885234.1 118470230 4533921 917379..918095 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase 918095 4533921 MSMEG_0831 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_885234.1 917379 D 246196 CDS YP_885235.1 118468281 4535768 complement(918079..919005) 1 NC_008596.1 identified by match to protein family HMM PF00583; acetyltransferase, gnat family protein 919005 4535768 MSMEG_0830 Mycobacterium smegmatis str. MC2 155 acetyltransferase, gnat family protein YP_885235.1 918079 R 246196 CDS YP_885236.1 118470670 4534679 complement(919024..919617) 1 NC_008596.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 919617 def 4534679 def Mycobacterium smegmatis str. MC2 155 peptide deformylase YP_885236.1 919024 R 246196 CDS YP_885237.1 118469601 4531106 919745..920056 1 NC_008596.1 hypothetical protein 920056 4531106 MSMEG_0833 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885237.1 919745 D 246196 CDS YP_885238.1 118468649 4533581 920096..920572 1 NC_008596.1 tuberculin-like protein 920572 4533581 MSMEG_0834 Mycobacterium smegmatis str. MC2 155 tuberculin-like protein YP_885238.1 920096 D 246196 CDS YP_885239.1 118473568 4531002 920583..921293 1 NC_008596.1 identified by similarity to PDB:1IB5_A.0; match to protein family HMM PF00080; copper/zinc superoxide dismutase 921293 sodC 4531002 sodC Mycobacterium smegmatis str. MC2 155 copper/zinc superoxide dismutase YP_885239.1 920583 D 246196 CDS YP_885240.1 118471684 4536446 921274..922404 1 NC_008596.1 ATP-dependent carboxylate-amine ligase; carboxylate-amine ligase 922404 4536446 MSMEG_0836 Mycobacterium smegmatis str. MC2 155 carboxylate-amine ligase YP_885240.1 921274 D 246196 CDS YP_885241.1 118471444 4535119 922415..922870 1 NC_008596.1 hypothetical protein 922870 4535119 MSMEG_0837 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885241.1 922415 D 246196 CDS YP_885242.1 118471403 4534878 complement(922879..923928) 1 NC_008596.1 identified by match to protein family HMM PF01037; AsnC family transcriptional regulator 923928 4534878 MSMEG_0838 Mycobacterium smegmatis str. MC2 155 AsnC family transcriptional regulator YP_885242.1 922879 R 246196 CDS YP_885243.1 118468409 4534551 924025..924651 1 NC_008596.1 identified by match to protein family HMM PF02190; ATP-dependent protease La 924651 4534551 MSMEG_0839 Mycobacterium smegmatis str. MC2 155 ATP-dependent protease La YP_885243.1 924025 D 246196 CDS YP_885244.1 118469571 4531445 complement(924856..925509) 1 NC_008596.1 hypothetical protein 925509 4531445 MSMEG_0840 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885244.1 924856 R 246196 CDS YP_885245.1 118471896 4536233 complement(926980..927264) 1 NC_008596.1 hypothetical protein 927264 4536233 MSMEG_0842 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885245.1 926980 R 246196 CDS YP_885246.1 118472742 4532371 complement(927500..927853) 1 NC_008596.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit G 927853 4532371 MSMEG_0843 Mycobacterium smegmatis str. MC2 155 monovalent cation/H+ antiporter subunit G YP_885246.1 927500 R 246196 CDS YP_885247.1 118472924 4531213 complement(927850..928140) 1 NC_008596.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit F 928140 4531213 MSMEG_0844 Mycobacterium smegmatis str. MC2 155 monovalent cation/H+ antiporter subunit F YP_885247.1 927850 R 246196 CDS YP_885248.1 118471580 4534442 complement(928137..928676) 1 NC_008596.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit E 928676 4534442 MSMEG_0845 Mycobacterium smegmatis str. MC2 155 monovalent cation/H+ antiporter subunit E YP_885248.1 928137 R 246196 CDS YP_885249.1 118469847 4532738 complement(928673..930268) 1 NC_008596.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D 930268 4532738 MSMEG_0846 Mycobacterium smegmatis str. MC2 155 monovalent cation/H+ antiporter subunit D YP_885249.1 928673 R 246196 CDS YP_885250.1 118470804 4531914 complement(930265..930732) 1 NC_008596.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 930732 4531914 MSMEG_0847 Mycobacterium smegmatis str. MC2 155 monovalent cation/H+ antiporter subunit C YP_885250.1 930265 R 246196 CDS YP_885251.2 161598320 4536387 complement(930732..933611) 1 NC_008596.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit A 933611 4536387 MSMEG_0848 Mycobacterium smegmatis str. MC2 155 monovalent cation/H+ antiporter subunit A YP_885251.2 930732 R 246196 CDS YP_885252.1 118471739 4536386 933768..934085 1 NC_008596.1 oxygenase 934085 4536386 MSMEG_0849 Mycobacterium smegmatis str. MC2 155 oxygenase YP_885252.1 933768 D 246196 CDS YP_885253.1 118472700 4531668 934162..935004 1 NC_008596.1 hypothetical protein 935004 4531668 MSMEG_0850 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885253.1 934162 D 246196 CDS YP_885254.1 118473619 4531015 complement(935059..936345) 1 NC_008596.1 identified by match to protein family HMM PF02040; match to protein family HMM PF03600; citrate transporter 936345 4531015 MSMEG_0851 Mycobacterium smegmatis str. MC2 155 citrate transporter YP_885254.1 935059 R 246196 CDS YP_885255.1 118467949 4532060 complement(936364..936822) 1 NC_008596.1 identified by match to protein family HMM PF00571; hypothetical protein 936822 4532060 MSMEG_0852 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885255.1 936364 R 246196 CDS YP_885256.1 118468627 4535025 complement(936855..937103) 1 NC_008596.1 hypothetical protein 937103 4535025 MSMEG_0853 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885256.1 936855 R 246196 CDS YP_885257.1 118469789 4535813 937236..938204 1 NC_008596.1 identified by match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF07730; two-component system sensor kinase 938204 4535813 MSMEG_0854 Mycobacterium smegmatis str. MC2 155 two-component system sensor kinase YP_885257.1 937236 D 246196 CDS YP_885258.1 118468464 4537285 938204..938851 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; LuxR family transcriptional regulator 938851 4537285 MSMEG_0856 Mycobacterium smegmatis str. MC2 155 LuxR family transcriptional regulator YP_885258.1 938204 D 246196 CDS YP_885259.1 118469910 4535564 complement(938818..939270) 1 NC_008596.1 identified by match to protein family HMM PF08044; hypothetical protein 939270 4535564 MSMEG_0855 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885259.1 938818 R 246196 CDS YP_885260.1 118471135 4531822 complement(939331..939645) 1 NC_008596.1 hypothetical protein 939645 4531822 MSMEG_0857 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885260.1 939331 R 246196 CDS YP_885261.1 118470584 4531371 939739..940752 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 940752 4531371 MSMEG_0859 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885261.1 939739 D 246196 CDS YP_885262.1 118471027 4534483 complement(940749..942986) 1 NC_008596.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02359; cell division control protein Cdc48 942986 4534483 MSMEG_0858 Mycobacterium smegmatis str. MC2 155 cell division control protein Cdc48 YP_885262.1 940749 R 246196 CDS YP_885263.1 118473526 4533626 complement(942988..943848) 1 NC_008596.1 identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; CDP-diacylglycerol--serine O-phosphatidyltransferase 943848 4533626 MSMEG_0860 Mycobacterium smegmatis str. MC2 155 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_885263.1 942988 R 246196 CDS YP_885264.1 118473627 4531023 complement(943845..944543) 1 NC_008596.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 944543 psd 4531023 psd Mycobacterium smegmatis str. MC2 155 phosphatidylserine decarboxylase YP_885264.1 943845 R 246196 CDS YP_885265.1 118468631 4535029 complement(944579..945775) 1 NC_008596.1 identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis protein MoeA 945775 4535029 MSMEG_0862 Mycobacterium smegmatis str. MC2 155 molybdopterin biosynthesis protein MoeA YP_885265.1 944579 R 246196 CDS YP_885266.1 118469642 4535052 complement(945772..946695) 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 946695 4535052 MSMEG_0863 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_885266.1 945772 R 246196 CDS YP_885267.1 118469019 4530870 946733..947272 1 NC_008596.1 identified by match to protein family HMM PF03703; membrane flanked domain-containing protein 947272 4530870 MSMEG_0864 Mycobacterium smegmatis str. MC2 155 membrane flanked domain-containing protein YP_885267.1 946733 D 246196 CDS YP_885268.1 118471736 4536383 947269..948768 1 NC_008596.1 identified by match to protein family HMM PF03703; membrane flanked domain-containing protein 948768 4536383 MSMEG_0865 Mycobacterium smegmatis str. MC2 155 membrane flanked domain-containing protein YP_885268.1 947269 D 246196 CDS YP_885269.1 118471392 4534986 948794..949609 1 NC_008596.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460; hydrolase 949609 4534986 MSMEG_0867 Mycobacterium smegmatis str. MC2 155 hydrolase YP_885269.1 948794 D 246196 CDS YP_885270.1 118468804 4535322 complement(949606..951312) 1 NC_008596.1 identified by match to protein family HMM PF04851; DNA or RNA helicase of superfamily protein II 951312 4535322 MSMEG_0866 Mycobacterium smegmatis str. MC2 155 DNA or RNA helicase of superfamily protein II YP_885270.1 949606 R 246196 CDS YP_885271.1 118469834 4532725 complement(951585..955409) 1 NC_008596.1 hypothetical protein 955409 4532725 MSMEG_0868 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885271.1 951585 R 246196 CDS YP_885272.1 118470077 4535970 955503..955901 1 NC_008596.1 hypothetical protein 955901 4535970 MSMEG_0869 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885272.1 955503 D 246196 CDS YP_885273.1 118474038 4531719 complement(956321..958486) 1 NC_008596.1 identified by match to protein family HMM PF01315; match to protein family HMM PF02738; oxidoreductase 958486 4531719 MSMEG_0870 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_885273.1 956321 R 246196 CDS YP_885274.1 118472992 4532272 complement(958483..959457) 1 NC_008596.1 identified by match to protein family HMM PF00941; aldehyde or xanthine dehydrogenase, molybdopterin binding subunit protein 959457 4532272 MSMEG_0871 Mycobacterium smegmatis str. MC2 155 aldehyde or xanthine dehydrogenase, molybdopterin binding subunit protein YP_885274.1 958483 R 246196 CDS YP_885275.1 118470338 4534921 complement(959461..960078) 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF01799; twin-arginine translocation pathway signal 960078 4534921 MSMEG_0872 Mycobacterium smegmatis str. MC2 155 twin-arginine translocation pathway signal YP_885275.1 959461 R 246196 CDS YP_885276.1 118472736 4532365 complement(960209..960379) 1 NC_008596.1 hypothetical protein 960379 4532365 MSMEG_0873 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885276.1 960209 R 246196 CDS YP_885277.1 118467792 4535714 960615..961319 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 961319 4535714 MSMEG_0874 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_885277.1 960615 D 246196 CDS YP_885278.1 118469388 4532282 961391..962794 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; sialic acid transporter 962794 4532282 MSMEG_0875 Mycobacterium smegmatis str. MC2 155 sialic acid transporter YP_885278.1 961391 D 246196 CDS YP_885279.1 118469880 4536572 962791..963723 1 NC_008596.1 identified by match to protein family HMM PF00701; dihydrodipicolinate synthase 963723 4536572 MSMEG_0877 Mycobacterium smegmatis str. MC2 155 dihydrodipicolinate synthase YP_885279.1 962791 D 246196 CDS YP_885280.1 118471698 4536421 complement(963720..964637) 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 964637 4536421 MSMEG_0876 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_885280.1 963720 R 246196 CDS YP_885281.1 118468552 4536104 964736..965305 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 965305 4536104 MSMEG_0878 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_885281.1 964736 D 246196 CDS YP_885282.1 118469335 4535925 complement(965380..965526) 1 NC_008596.1 hypothetical protein 965526 4535925 MSMEG_0879 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885282.1 965380 R 246196 CDS YP_885283.1 118469510 4533338 965533..967158 1 NC_008596.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 967158 groEL 4533338 groEL Mycobacterium smegmatis str. MC2 155 molecular chaperone GroEL YP_885283.1 965533 D 246196 CDS YP_885284.1 118471345 4533229 967303..968136 1 NC_008596.1 hypothetical protein 968136 4533229 MSMEG_0881 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885284.1 967303 D 246196 CDS YP_885285.1 118471680 4536442 complement(968200..968583) 1 NC_008596.1 hypothetical protein 968583 4536442 MSMEG_0882 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885285.1 968200 R 246196 CDS YP_885286.1 118472407 4531328 complement(968609..970351) 1 NC_008596.1 identified by match to protein family HMM PF07908; match to protein family HMM PF07969; amidohydrolase 970351 4531328 MSMEG_0883 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_885286.1 968609 R 246196 CDS YP_885287.1 118468915 4537077 970433..970813 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase 970813 4537077 MSMEG_0884 Mycobacterium smegmatis str. MC2 155 glyoxalase YP_885287.1 970433 D 246196 CDS YP_885288.1 118470007 4532745 complement(970817..971320) 1 NC_008596.1 hypothetical protein 971320 4532745 MSMEG_0885 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885288.1 970817 R 246196 CDS YP_885289.1 118471062 4537135 complement(971320..972810) 1 NC_008596.1 identified by match to protein family HMM PF00069; serine/threonine protein kinase 972810 4537135 MSMEG_0886 Mycobacterium smegmatis str. MC2 155 serine/threonine protein kinase YP_885289.1 971320 R 246196 CDS YP_885290.1 118470336 4534919 972865..973422 1 NC_008596.1 hypothetical protein 973422 4534919 MSMEG_0887 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885290.1 972865 D 246196 CDS YP_885291.1 118472099 4537480 973419..973982 1 NC_008596.1 hypothetical protein 973982 4537480 MSMEG_0888 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885291.1 973419 D 246196 CDS YP_885292.1 118473298 4535169 973997..975526 1 NC_008596.1 identified by match to protein family HMM PF00171; succinate-semialdehyde dehydrogenase 975526 4535169 MSMEG_0889 Mycobacterium smegmatis str. MC2 155 succinate-semialdehyde dehydrogenase YP_885292.1 973997 D 246196 CDS YP_885293.1 118467958 4532069 975595..976194 1 NC_008596.1 identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; HD domain-containing protein 976194 4532069 MSMEG_0890 Mycobacterium smegmatis str. MC2 155 HD domain-containing protein YP_885293.1 975595 D 246196 CDS YP_885294.1 118468289 4535776 976256..977107 1 NC_008596.1 identified by match to protein family HMM PF03976; polyphosphate kinase 977107 4535776 MSMEG_0891 Mycobacterium smegmatis str. MC2 155 polyphosphate kinase YP_885294.1 976256 D 246196 CDS YP_885295.1 118471532 4537612 977160..978005 1 NC_008596.1 hypothetical protein 978005 4537612 MSMEG_0892 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885295.1 977160 D 246196 CDS YP_885296.1 118473715 4536949 complement(978024..978347) 1 NC_008596.1 hypothetical protein 978347 4536949 MSMEG_0893 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885296.1 978024 R 246196 CDS YP_885297.1 118472915 4533784 978540..979904 1 NC_008596.1 identified by match to protein family HMM PF01408; match to protein family HMM PF03447; dihydrodipicolinate reductase 979904 4533784 MSMEG_0894 Mycobacterium smegmatis str. MC2 155 dihydrodipicolinate reductase YP_885297.1 978540 D 246196 CDS YP_885298.1 118473104 4531165 980004..980747 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 980747 4531165 MSMEG_0895 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_885298.1 980004 D 246196 CDS YP_885299.1 118468479 4537300 980820..982190 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; integral membrane transporter 982190 4537300 MSMEG_0896 Mycobacterium smegmatis str. MC2 155 integral membrane transporter YP_885299.1 980820 D 246196 CDS YP_885300.1 118468109 4535607 982187..983464 1 NC_008596.1 hypothetical protein 983464 4535607 MSMEG_0897 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885300.1 982187 D 246196 CDS YP_885301.1 118471328 4534841 983461..984273 1 NC_008596.1 identified by match to protein family HMM PF01116; tagatose-1,6-bisphosphate aldolase GatY 984273 4534841 MSMEG_0898 Mycobacterium smegmatis str. MC2 155 tagatose-1,6-bisphosphate aldolase GatY YP_885301.1 983461 D 246196 CDS YP_885302.1 118471612 4536524 complement(984361..986376) 1 NC_008596.1 identified by match to protein family HMM PF00326; match to protein family HMM PF02897; prolyl oligopeptidase 986376 4536524 MSMEG_0899 Mycobacterium smegmatis str. MC2 155 prolyl oligopeptidase YP_885302.1 984361 R 246196 CDS YP_885303.1 118470249 4536768 986441..987964 1 NC_008596.1 identified by match to protein family HMM PF00171; eptc-inducible aldehyde dehydrogenase 987964 4536768 MSMEG_0900 Mycobacterium smegmatis str. MC2 155 eptc-inducible aldehyde dehydrogenase YP_885303.1 986441 D 246196 CDS YP_885304.1 118468734 4534262 987998..988474 1 NC_008596.1 identified by match to protein family HMM PF05610; hypothetical protein 988474 4534262 MSMEG_0901 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885304.1 987998 D 246196 CDS YP_885305.1 118471433 4532816 complement(988475..989344) 1 NC_008596.1 identified by match to protein family HMM PF02353; cyclopropane-fatty-acyl-phospholipid synthase 989344 4532816 MSMEG_0902 Mycobacterium smegmatis str. MC2 155 cyclopropane-fatty-acyl-phospholipid synthase YP_885305.1 988475 R 246196 CDS YP_885306.1 118472596 4536874 989521..990915 1 NC_008596.1 E3 component of alpha keto acid dehydrogenase complexes LpdC; forms a homodimer; binds one molecule of FAD monomer; catalyzes NAD+-dependent oxidation of dihydrolipoyl cofactors that are covalently linked to the E2 component; dihydrolipoamide dehydrogenase 990915 lpdA 4536874 lpdA Mycobacterium smegmatis str. MC2 155 dihydrolipoamide dehydrogenase YP_885306.1 989521 D 246196 CDS YP_885307.1 118467482 4537000 990912..991181 1 NC_008596.1 hypothetical protein 991181 4537000 MSMEG_0904 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885307.1 990912 D 246196 CDS YP_885308.1 118470195 4532489 complement(991188..991748) 1 NC_008596.1 identified by match to protein family HMM PF02627; hypothetical protein 991748 pcaC 4532489 pcaC Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885308.1 991188 R 246196 CDS YP_885309.1 118468644 4533576 complement(991776..993212) 1 NC_008596.1 identified by match to protein family HMM PF01381; match to protein family HMM PF06114; DNA-binding protein 993212 4533576 MSMEG_0906 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_885309.1 991776 R 246196 CDS YP_885310.1 118473755 4537731 993284..993628 1 NC_008596.1 hypothetical protein 993628 4537731 MSMEG_0907 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885310.1 993284 D 246196 CDS YP_885311.1 118469938 4535849 993604..994002 1 NC_008596.1 hypothetical protein 994002 4535849 MSMEG_0908 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885311.1 993604 D 246196 CDS YP_885312.1 118472377 4534767 994104..994952 1 NC_008596.1 identified by match to protein family HMM PF01643; acyl-ACP thioesterase 994952 4534767 MSMEG_0909 Mycobacterium smegmatis str. MC2 155 acyl-ACP thioesterase YP_885312.1 994104 D 246196 CDS YP_885313.1 118467919 4532652 complement(995033..995167) 1 NC_008596.1 hypothetical protein 995167 4532652 MSMEG_0910 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885313.1 995033 R 246196 CDS YP_885314.1 118471509 4536848 995201..996487 1 NC_008596.1 identified by match to protein family HMM PF00463; match to protein family HMM TIGR01346; isocitrate lyase 996487 aceA 4536848 aceA Mycobacterium smegmatis str. MC2 155 isocitrate lyase YP_885314.1 995201 D 246196 CDS YP_885315.1 118469602 4531107 996618..997478 1 NC_008596.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 997478 4531107 MSMEG_0912 Mycobacterium smegmatis str. MC2 155 3-hydroxybutyryl-CoA dehydrogenase YP_885315.1 996618 D 246196 CDS YP_885316.1 118470425 4532216 997643..998515 1 NC_008596.1 identified by match to protein family HMM PF02353; methoxy mycolic acid synthase 1 998515 4532216 MSMEG_0913 Mycobacterium smegmatis str. MC2 155 methoxy mycolic acid synthase 1 YP_885316.1 997643 D 246196 CDS YP_885317.1 118468502 4535483 complement(998555..999427) 1 NC_008596.1 hypothetical protein 999427 4535483 MSMEG_0914 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885317.1 998555 R 246196 CDS YP_885318.1 118473722 4536956 complement(999537..1000424) 1 NC_008596.1 identified by match to protein family HMM PF03976; polyphosphate kinase 1000424 4536956 MSMEG_0915 Mycobacterium smegmatis str. MC2 155 polyphosphate kinase YP_885318.1 999537 R 246196 CDS YP_885319.1 118472997 4531289 complement(1000429..1001133) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1001133 4531289 MSMEG_0916 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885319.1 1000429 R 246196 CDS YP_885320.1 118471156 4530946 1001253..1002569 1 NC_008596.1 identified by match to protein family HMM PF04286; hypothetical protein 1002569 4530946 MSMEG_0917 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885320.1 1001253 D 246196 CDS YP_885321.1 118467518 4535529 1002657..1003085 1 NC_008596.1 identified by match to protein family HMM PF01381; XRE family transcriptional regulator 1003085 4535529 MSMEG_0918 Mycobacterium smegmatis str. MC2 155 XRE family transcriptional regulator YP_885321.1 1002657 D 246196 CDS YP_885322.1 118468465 4537286 1003169..1003867 1 NC_008596.1 heparin-binding hemagglutinin 1003867 4537286 MSMEG_0919 Mycobacterium smegmatis str. MC2 155 heparin-binding hemagglutinin YP_885322.1 1003169 D 246196 CDS YP_885323.1 118468340 4532091 1003944..1004228 1 NC_008596.1 hypothetical protein 1004228 4532091 MSMEG_0920 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885323.1 1003944 D 246196 CDS YP_885324.1 118471304 4534644 1004242..1004646 1 NC_008596.1 hypothetical protein 1004646 4534644 MSMEG_0921 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885324.1 1004242 D 246196 CDS YP_885325.1 118471242 4534429 1004646..1005329 1 NC_008596.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 1005329 deoC 4534429 deoC Mycobacterium smegmatis str. MC2 155 deoxyribose-phosphate aldolase YP_885325.1 1004646 D 246196 CDS YP_885326.1 118469907 4535561 complement(1005367..1006302) 1 NC_008596.1 hypothetical protein 1006302 4535561 MSMEG_0923 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885326.1 1005367 R 246196 CDS YP_885327.1 118472269 4534795 complement(1006363..1007163) 1 NC_008596.1 identified by match to protein family HMM PF00795; carbon-nitrogen hydrolase 1007163 4534795 MSMEG_0924 Mycobacterium smegmatis str. MC2 155 carbon-nitrogen hydrolase YP_885327.1 1006363 R 246196 CDS YP_885328.1 118471235 4534422 complement(1007170..1007946) 1 NC_008596.1 hypothetical protein 1007946 4534422 MSMEG_0925 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885328.1 1007170 R 246196 CDS YP_885329.1 118471995 4536142 complement(1007951..1008442) 1 NC_008596.1 hypothetical protein 1008442 4536142 MSMEG_0926 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885329.1 1007951 R 246196 CDS YP_885330.1 118468388 4534777 complement(1008489..1008995) 1 NC_008596.1 hypothetical protein 1008995 4534777 MSMEG_0927 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885330.1 1008489 R 246196 CDS YP_885331.1 118473099 4531160 1009022..1010113 1 NC_008596.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1010113 murB 4531160 murB Mycobacterium smegmatis str. MC2 155 UDP-N-acetylenolpyruvoylglucosamine reductase YP_885331.1 1009022 D 246196 CDS YP_885332.1 118468294 4533052 1010120..1011478 1 NC_008596.1 identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 1011478 4533052 MSMEG_0929 Mycobacterium smegmatis str. MC2 155 ErfK/YbiS/YcfS/YnhG family protein YP_885332.1 1010120 D 246196 CDS YP_885333.1 118468207 4536649 complement(1011488..1012237) 1 NC_008596.1 identified by match to protein family HMM PF00106; serine 3-dehydrogenase 1012237 4536649 MSMEG_0930 Mycobacterium smegmatis str. MC2 155 serine 3-dehydrogenase YP_885333.1 1011488 R 246196 CDS YP_885334.1 118470467 4536776 complement(1012270..1012557) 1 NC_008596.1 hypothetical protein 1012557 4536776 MSMEG_0931 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885334.1 1012270 R 246196 CDS YP_885335.1 118469375 4535889 1012561..1013760 1 NC_008596.1 identified by match to protein family HMM PF00480; ROK family protein 1013760 4535889 MSMEG_0932 Mycobacterium smegmatis str. MC2 155 ROK family protein YP_885335.1 1012561 D 246196 CDS YP_885336.1 118473929 4537367 1013771..1015075 1 NC_008596.1 identified by match to protein family HMM PF00534; hypothetical protein 1015075 4537367 MSMEG_0933 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885336.1 1013771 D 246196 CDS YP_885337.1 118471255 4531531 1015072..1015569 1 NC_008596.1 hypothetical protein 1015569 4531531 MSMEG_0934 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885337.1 1015072 D 246196 CDS YP_885338.1 118471051 4537124 1015609..1016352 1 NC_008596.1 identified by match to protein family HMM PF00300; match to protein family HMM TIGR01258; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1016352 4537124 MSMEG_0935 Mycobacterium smegmatis str. MC2 155 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_885338.1 1015609 D 246196 CDS YP_885339.1 118471880 4536256 1016604..1017758 1 NC_008596.1 identified by similarity to SP:P23545; match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase SenX3 1017758 senX3 4536256 senX3 Mycobacterium smegmatis str. MC2 155 sensor histidine kinase SenX3 YP_885339.1 1016604 D 246196 CDS YP_885340.1 118470709 4532546 1017764..1018441 1 NC_008596.1 identified by similarity to SP:Q50447; match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator RegX3 1018441 regX3 4532546 regX3 Mycobacterium smegmatis str. MC2 155 DNA-binding response regulator RegX3 YP_885340.1 1017764 D 246196 CDS YP_885341.1 118472817 4536671 complement(1018465..1019265) 1 NC_008596.1 hypothetical protein 1019265 4536671 MSMEG_0938 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885341.1 1018465 R 246196 CDS YP_885342.1 118468013 4533094 1019379..1020338 1 NC_008596.1 identified by match to protein family HMM PF02541; Ppx/GppA phosphatase 1020338 4533094 MSMEG_0939 Mycobacterium smegmatis str. MC2 155 Ppx/GppA phosphatase YP_885342.1 1019379 D 246196 CDS YP_885343.1 118470488 4537172 1020368..1021438 1 NC_008596.1 hypothetical protein 1021438 4537172 MSMEG_0940 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885343.1 1020368 D 246196 CDS YP_885344.1 118470382 4532329 1021461..1022306 1 NC_008596.1 identified by match to protein family HMM PF01261; AP endonuclease, family protein 2 1022306 4532329 MSMEG_0941 Mycobacterium smegmatis str. MC2 155 AP endonuclease, family protein 2 YP_885344.1 1021461 D 246196 CDS YP_885345.1 118472243 4532464 1022339..1023154 1 NC_008596.1 hypothetical protein 1023154 4532464 MSMEG_0942 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885345.1 1022339 D 246196 CDS YP_885346.1 118472220 4531470 1023180..1024040 1 NC_008596.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 1024040 proC 4531470 proC Mycobacterium smegmatis str. MC2 155 pyrroline-5-carboxylate reductase YP_885346.1 1023180 D 246196 CDS YP_885347.1 118469304 4533369 1024188..1024406 1 NC_008596.1 identified by match to protein family HMM TIGR01764; DNA binding domain-containing protein 1024406 4533369 MSMEG_0944 Mycobacterium smegmatis str. MC2 155 DNA binding domain-containing protein YP_885347.1 1024188 D 246196 CDS YP_885348.1 118472375 4534765 1024591..1024692 1 NC_008596.1 identified by match to protein family HMM PF08213; hypothetical protein 1024692 4534765 MSMEG_0945 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885348.1 1024591 D 246196 CDS YP_885349.1 118467367 4534052 1024821..1025849 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; NAD dependent epimerase/dehydratase 1025849 4534052 MSMEG_0946 Mycobacterium smegmatis str. MC2 155 NAD dependent epimerase/dehydratase YP_885349.1 1024821 D 246196 CDS YP_885350.1 118467692 4537330 1025886..1026950 1 NC_008596.1 identified by match to protein family HMM PF01553; acyltransferase 1026950 4537330 MSMEG_0947 Mycobacterium smegmatis str. MC2 155 acyltransferase YP_885350.1 1025886 D 246196 CDS YP_885351.1 118472344 4534235 complement(1026981..1027514) 1 NC_008596.1 hypothetical protein 1027514 4534235 MSMEG_0948 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885351.1 1026981 R 246196 CDS YP_885352.1 118472550 4532677 complement(1027603..1028493) 1 NC_008596.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; HAD-superfamily hydrolase 1028493 4532677 MSMEG_0949 Mycobacterium smegmatis str. MC2 155 HAD-superfamily hydrolase YP_885352.1 1027603 R 246196 CDS YP_885353.1 118467825 4534576 complement(1028516..1028839) 1 NC_008596.1 hypothetical protein 1028839 4534576 MSMEG_0950 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885353.1 1028516 R 246196 CDS YP_885354.1 118473155 4532596 1028600..1028842 1 NC_008596.1 identified by match to protein family HMM PF05768; glutaredoxin 1028842 4532596 MSMEG_0951 Mycobacterium smegmatis str. MC2 155 glutaredoxin YP_885354.1 1028600 D 246196 CDS YP_885355.1 118468822 4534078 1029002..1030357 1 NC_008596.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 1030357 hemA 4534078 hemA Mycobacterium smegmatis str. MC2 155 glutamyl-tRNA reductase YP_885355.1 1029002 D 246196 CDS YP_885356.1 118472022 4534102 1030361..1031317 1 NC_008596.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 1031317 hemC 4534102 hemC Mycobacterium smegmatis str. MC2 155 porphobilinogen deaminase YP_885356.1 1030361 D 246196 CDS YP_885357.1 118473053 4534605 1031413..1033245 1 NC_008596.1 identified by match to protein family HMM PF00590; match to protein family HMM PF02602; uroporphyrinogen-III synthase 1033245 hemD 4534605 hemD Mycobacterium smegmatis str. MC2 155 uroporphyrinogen-III synthase YP_885357.1 1031413 D 246196 CDS YP_885358.1 118467685 4537323 1033330..1034310 1 NC_008596.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1034310 hemB 4537323 hemB Mycobacterium smegmatis str. MC2 155 delta-aminolevulinic acid dehydratase YP_885358.1 1033330 D 246196 CDS YP_885359.1 118468963 4533527 complement(1034274..1034771) 1 NC_008596.1 hypothetical protein 1034771 4533527 MSMEG_0955 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885359.1 1034274 R 246196 CDS YP_885360.1 118470504 4537557 1034307..1034738 1 NC_008596.1 hypothetical protein 1034738 4537557 MSMEG_0957 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885360.1 1034307 D 246196 CDS YP_885361.1 118469438 4534814 1034759..1035154 1 NC_008596.1 hypothetical protein 1035154 4534814 MSMEG_0958 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885361.1 1034759 D 246196 CDS YP_885362.1 118470196 4532490 1035189..1035683 1 NC_008596.1 transmembrane protein 1035683 4532490 MSMEG_0959 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_885362.1 1035189 D 246196 CDS YP_885363.1 118472625 4537275 1035680..1035910 1 NC_008596.1 transmembrane protein 1035910 4537275 MSMEG_0960 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_885363.1 1035680 D 246196 CDS YP_885364.1 118468305 4533063 1036854..1037447 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1037447 4533063 MSMEG_0962 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885364.1 1036854 D 246196 CDS YP_885365.1 118469668 4535430 1037522..1037764 1 NC_008596.1 hypothetical protein 1037764 4535430 MSMEG_0963 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885365.1 1037522 D 246196 CDS YP_885366.1 118469930 4535841 1037801..1038283 1 NC_008596.1 identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 1038283 4535841 MSMEG_0964 Mycobacterium smegmatis str. MC2 155 pyridoxamine 5'-phosphate oxidase YP_885366.1 1037801 D 246196 CDS YP_885367.1 118472180 4533718 1038908..1039543 1 NC_008596.1 porin 1039543 4533718 MSMEG_0965 Mycobacterium smegmatis str. MC2 155 porin YP_885367.1 1038908 D 246196 CDS YP_885368.1 118471013 4534469 complement(1039684..1040067) 1 NC_008596.1 identified by match to protein family HMM TIGR00026; hypothetical protein 1040067 4534469 MSMEG_0966 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885368.1 1039684 R 246196 CDS YP_885369.1 118468773 4535664 complement(1040090..1040470) 1 NC_008596.1 identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 1040470 4535664 MSMEG_0967 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885369.1 1040090 R 246196 CDS YP_885370.1 118467459 4536604 1040556..1042010 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 1042010 4536604 MSMEG_0968 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_885370.1 1040556 D 246196 CDS YP_885371.1 118473236 4536923 1042040..1043395 1 NC_008596.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 1043395 hemL 4536923 hemL Mycobacterium smegmatis str. MC2 155 glutamate-1-semialdehyde aminotransferase YP_885371.1 1042040 D 246196 CDS YP_885372.1 118470802 4536086 1043446..1044054 1 NC_008596.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase 1044054 4536086 MSMEG_0970 Mycobacterium smegmatis str. MC2 155 phosphoglycerate mutase YP_885372.1 1043446 D 246196 CDS YP_885373.1 118470613 4532116 1044054..1044707 1 NC_008596.1 hypothetical protein 1044707 4532116 MSMEG_0971 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885373.1 1044054 D 246196 CDS YP_885374.1 118471789 4536360 1044704..1045489 1 NC_008596.1 identified by match to protein family HMM PF02683; cytochrome C biogenesis protein transmembrane region 1045489 4536360 MSMEG_0972 Mycobacterium smegmatis str. MC2 155 cytochrome C biogenesis protein transmembrane region YP_885374.1 1044704 D 246196 CDS YP_885375.1 118467775 4533406 1045489..1047138 1 NC_008596.1 identified by match to protein family HMM PF05140; hypothetical protein 1047138 4533406 MSMEG_0973 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885375.1 1045489 D 246196 CDS YP_885376.1 118468805 4535323 1047135..1048130 1 NC_008596.1 identified by match to protein family HMM PF01578; match to protein family HMM TIGR03144; cytochrome C biogenesis protein CcsB 1048130 ccsB 4535323 ccsB Mycobacterium smegmatis str. MC2 155 cytochrome C biogenesis protein CcsB YP_885376.1 1047135 D 246196 CDS YP_885377.1 118469741 4532026 1048209..1049537 1 NC_008596.1 hypothetical protein 1049537 4532026 MSMEG_0975 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885377.1 1048209 D 246196 CDS YP_885378.1 118471467 4534386 complement(1049555..1049719) 1 NC_008596.1 hypothetical protein 1049719 4534386 MSMEG_0976 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885378.1 1049555 R 246196 CDS YP_885379.1 118473675 4531072 1049796..1050068 1 NC_008596.1 hypothetical protein 1050068 4531072 MSMEG_0977 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885379.1 1049796 D 246196 CDS YP_885380.1 118472881 4534024 1050065..1051105 1 NC_008596.1 identified by match to protein family HMM PF00266; class V aminotransferase 1051105 4534024 MSMEG_0978 Mycobacterium smegmatis str. MC2 155 class V aminotransferase YP_885380.1 1050065 D 246196 CDS YP_885381.1 118468455 4536903 1051203..1051451 1 NC_008596.1 keratin associated protein 1051451 4536903 MSMEG_0979 Mycobacterium smegmatis str. MC2 155 keratin associated protein YP_885381.1 1051203 D 246196 CDS YP_885382.1 118471546 4537627 complement(1051528..1053159) 1 NC_008596.1 identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730; signal transduction histidine kinase 1053159 4537627 MSMEG_0980 Mycobacterium smegmatis str. MC2 155 signal transduction histidine kinase YP_885382.1 1051528 R 246196 CDS YP_885383.1 118472273 4534799 1053329..1053688 1 NC_008596.1 identified by match to protein family HMM PF00072; two-component system regulator 1053688 4534799 MSMEG_0981 Mycobacterium smegmatis str. MC2 155 two-component system regulator YP_885383.1 1053329 D 246196 CDS YP_885384.1 118468327 4532078 1053805..1054854 1 NC_008596.1 identified by match to protein family HMM TIGR02122; immunogenic protein 1054854 4532078 MSMEG_0982 Mycobacterium smegmatis str. MC2 155 immunogenic protein YP_885384.1 1053805 D 246196 CDS YP_885385.1 118469818 4532844 1054857..1056935 1 NC_008596.1 identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM TIGR02123; trap transporter 4tm/12tm fusion protein 1056935 4532844 MSMEG_0984 Mycobacterium smegmatis str. MC2 155 trap transporter 4tm/12tm fusion protein YP_885385.1 1054857 D 246196 CDS YP_885386.1 118468578 4532705 complement(1056913..1057566) 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; two-component system response regulator 1057566 4532705 MSMEG_0983 Mycobacterium smegmatis str. MC2 155 two-component system response regulator YP_885386.1 1056913 R 246196 CDS YP_885387.1 118470068 4535961 complement(1057684..1059033) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; sugar transporter family protein 1059033 4535961 MSMEG_0985 Mycobacterium smegmatis str. MC2 155 sugar transporter family protein YP_885387.1 1057684 R 246196 CDS YP_885388.1 118470250 4536769 complement(1059121..1059849) 1 NC_008596.1 identified by match to protein family HMM PF00440; RemM protein 1059849 4536769 MSMEG_0986 Mycobacterium smegmatis str. MC2 155 RemM protein YP_885388.1 1059121 R 246196 CDS YP_885389.1 118467747 4535647 1059955..1060326 1 NC_008596.1 hypothetical protein 1060326 4535647 MSMEG_0987 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885389.1 1059955 D 246196 CDS YP_885390.1 118470734 4533285 complement(1060331..1061200) 1 NC_008596.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1061200 menA 4533285 menA Mycobacterium smegmatis str. MC2 155 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_885390.1 1060331 R 246196 CDS YP_885391.1 118472295 4532767 1061291..1061536 1 NC_008596.1 hypothetical protein 1061536 4532767 MSMEG_0989 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885391.1 1061291 D 246196 CDS YP_885392.1 118468329 4532080 1061533..1062312 1 NC_008596.1 Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate; 5'-methylthioadenosine phosphorylase 1062312 mtaP 4532080 mtaP Mycobacterium smegmatis str. MC2 155 5'-methylthioadenosine phosphorylase YP_885392.1 1061533 D 246196 CDS YP_885393.1 118469353 4533177 1062309..1063349 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase 1063349 4533177 MSMEG_0991 Mycobacterium smegmatis str. MC2 155 NAD-dependent epimerase/dehydratase YP_885393.1 1062309 D 246196 CDS YP_885394.1 118470075 4535968 1063406..1064533 1 NC_008596.1 identified by match to protein family HMM PF03060; 2-nitropropane dioxygenase 1064533 4535968 MSMEG_0992 Mycobacterium smegmatis str. MC2 155 2-nitropropane dioxygenase YP_885394.1 1063406 D 246196 CDS YP_885395.1 118469292 4532631 complement(1064543..1065556) 1 NC_008596.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; histidine kinase 1065556 4532631 MSMEG_0993 Mycobacterium smegmatis str. MC2 155 histidine kinase YP_885395.1 1064543 R 246196 CDS YP_885396.1 118467913 4532646 complement(1065553..1066230) 1 NC_008596.1 identified by similarity to SP:P35163; match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator ResD 1066230 resD 4532646 resD Mycobacterium smegmatis str. MC2 155 DNA-binding response regulator ResD YP_885396.1 1065553 R 246196 CDS YP_885397.1 118473697 4533245 1066335..1066994 1 NC_008596.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 1066994 4533245 MSMEG_0995 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_885397.1 1066335 D 246196 CDS YP_885398.1 118470896 4537202 1066994..1067647 1 NC_008596.1 hypothetical protein 1067647 4537202 MSMEG_0996 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885398.1 1066994 D 246196 CDS YP_885399.1 118471429 4532812 1067651..1068280 1 NC_008596.1 hypothetical protein 1068280 4532812 MSMEG_0997 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885399.1 1067651 D 246196 CDS YP_885400.1 118468213 4536655 1068322..1069431 1 NC_008596.1 identified by match to protein family HMM PF00174; oxidoreductase, molybdopterin binding 1069431 4536655 MSMEG_0998 Mycobacterium smegmatis str. MC2 155 oxidoreductase, molybdopterin binding YP_885400.1 1068322 D 246196 CDS YP_885401.1 118472358 4531609 1069356..1069922 1 NC_008596.1 hypothetical protein 1069922 4531609 MSMEG_1000 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885401.1 1069356 D 246196 CDS YP_885402.1 118473533 4533633 complement(1069848..1071212) 1 NC_008596.1 integral membrane protein 1071212 4533633 MSMEG_0999 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_885402.1 1069848 R 246196 CDS YP_885403.1 118467897 4531253 1071264..1072121 1 NC_008596.1 identified by match to protein family HMM PF00583; acetyltransferase, gnat family protein 1072121 4531253 MSMEG_1001 Mycobacterium smegmatis str. MC2 155 acetyltransferase, gnat family protein YP_885403.1 1071264 D 246196 CDS YP_885404.1 118468861 4535634 1072393..1073094 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 1073094 4535634 MSMEG_1002 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_885404.1 1072393 D 246196 CDS YP_885405.1 118472819 4536673 complement(1073102..1074424) 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 1074424 4536673 MSMEG_1003 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_885405.1 1073102 R 246196 CDS YP_885406.1 118472806 4536660 1074818..1075633 1 NC_008596.1 identified by match to protein family HMM PF01170; methyltransferase type 11 1075633 4536660 MSMEG_1005 Mycobacterium smegmatis str. MC2 155 methyltransferase type 11 YP_885406.1 1074818 D 246196 CDS YP_885407.1 118473963 4533034 1075656..1076717 1 NC_008596.1 identified by match to protein family HMM PF01636; aminoglycoside phosphotransferase 1076717 4533034 MSMEG_1006 Mycobacterium smegmatis str. MC2 155 aminoglycoside phosphotransferase YP_885407.1 1075656 D 246196 CDS YP_885408.1 118472092 4537101 complement(1076746..1077507) 1 NC_008596.1 identified by match to protein family HMM PF01925; transporter 1077507 4537101 MSMEG_1007 Mycobacterium smegmatis str. MC2 155 transporter YP_885408.1 1076746 R 246196 CDS YP_885409.1 118473153 4532594 1077699..1078190 1 NC_008596.1 hypothetical protein 1078190 4532594 MSMEG_1008 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885409.1 1077699 D 246196 CDS YP_885410.1 118471223 4533826 complement(1078286..1079770) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome p450 1079770 4533826 MSMEG_1009 Mycobacterium smegmatis str. MC2 155 cytochrome p450 YP_885410.1 1078286 R 246196 CDS YP_885411.1 118473528 4533628 1079902..1080561 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1080561 4533628 MSMEG_1010 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885411.1 1079902 D 246196 CDS YP_885412.1 118469634 4534095 1080585..1081448 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 1081448 4534095 MSMEG_1011 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_885412.1 1080585 D 246196 CDS YP_885413.1 118472761 4531950 complement(1081451..1082986) 1 NC_008596.1 identified by match to protein family HMM PF00245; alkaline phosphatase 1082986 4531950 MSMEG_1012 Mycobacterium smegmatis str. MC2 155 alkaline phosphatase YP_885413.1 1081451 R 246196 CDS YP_885414.1 118467484 4537002 complement(1083088..1084272) 1 NC_008596.1 hypothetical protein 1084272 4537002 MSMEG_1013 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885414.1 1083088 R 246196 CDS YP_885415.1 118468166 4535038 complement(1084283..1085353) 1 NC_008596.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 1085353 dinB 4535038 dinB Mycobacterium smegmatis str. MC2 155 DNA polymerase IV YP_885415.1 1084283 R 246196 CDS YP_885416.1 118473721 4536955 complement(1085358..1085972) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1085972 4536955 MSMEG_1015 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885416.1 1085358 R 246196 CDS YP_885417.1 118467632 4534206 1086080..1086643 1 NC_008596.1 identified by match to protein family HMM PF02525; match to protein family HMM PF03358; hypothetical protein 1086643 4534206 MSMEG_1016 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885417.1 1086080 D 246196 CDS YP_885418.1 118469775 4535799 1087117..1087356 1 NC_008596.1 identified by match to protein family HMM PF00462; match to protein family HMM TIGR02194; glutaredoxin 1087356 4535799 MSMEG_1017 Mycobacterium smegmatis str. MC2 155 glutaredoxin YP_885418.1 1087117 D 246196 CDS YP_885419.1 118469666 4535428 1087851..1089971 1 NC_008596.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1089971 4535428 MSMEG_1019 Mycobacterium smegmatis str. MC2 155 ribonucleotide-diphosphate reductase subunit alpha YP_885419.1 1087851 D 246196 CDS YP_885420.1 118468507 4535488 complement(1091275..1091694) 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase/bleomycin resistance protein/dioxygenase 1091694 4535488 MSMEG_1021 Mycobacterium smegmatis str. MC2 155 glyoxalase/bleomycin resistance protein/dioxygenase YP_885420.1 1091275 R 246196 CDS YP_885421.1 118470548 4533002 complement(1091864..1092091) 1 NC_008596.1 hypothetical protein 1092091 4533002 MSMEG_1022 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885421.1 1091864 R 246196 CDS YP_885422.1 118473648 4533516 1091966..1093375 1 NC_008596.1 identified by match to protein family HMM PF07690; integral membrane transporter 1093375 4533516 MSMEG_1023 Mycobacterium smegmatis str. MC2 155 integral membrane transporter YP_885422.1 1091966 D 246196 CDS YP_885423.1 118470926 4533974 1093372..1093515 1 NC_008596.1 hypothetical protein 1093515 4533974 MSMEG_1024 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885423.1 1093372 D 246196 CDS YP_885424.1 118469889 4533208 1093566..1094417 1 NC_008596.1 identified by match to protein family HMM PF00583; acetyltransferase 1094417 4533208 MSMEG_1026 Mycobacterium smegmatis str. MC2 155 acetyltransferase YP_885424.1 1093566 D 246196 CDS YP_885425.1 118469192 4535781 complement(1094389..1094964) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1094964 4535781 MSMEG_1025 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885425.1 1094389 R 246196 CDS YP_885426.1 118472046 4535392 1095088..1095966 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 1095966 4535392 MSMEG_1027 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885426.1 1095088 D 246196 CDS YP_885427.1 118469401 4531953 complement(1096036..1097223) 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM TIGR02032; geranylgeranyl reductase 1097223 4531953 MSMEG_1028 Mycobacterium smegmatis str. MC2 155 geranylgeranyl reductase YP_885427.1 1096036 R 246196 CDS YP_885428.1 118470138 4531697 1097374..1098111 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulatory protein 1098111 4531697 MSMEG_1029 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_885428.1 1097374 D 246196 CDS YP_885429.1 118468898 4536691 1098227..1099726 1 NC_008596.1 monooxygenase 1099726 4536691 MSMEG_1030 Mycobacterium smegmatis str. MC2 155 monooxygenase YP_885429.1 1098227 D 246196 CDS YP_885430.1 118472977 4532257 1099821..1100336 1 NC_008596.1 hypothetical protein 1100336 4532257 MSMEG_1031 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885430.1 1099821 D 246196 CDS YP_885431.1 118471904 4536242 1100390..1100539 1 NC_008596.1 hypothetical protein 1100539 4536242 MSMEG_1032 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885431.1 1100390 D 246196 CDS YP_885432.1 118469934 4535845 1100553..1101527 1 NC_008596.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 1101527 nrdF2 4535845 nrdF2 Mycobacterium smegmatis str. MC2 155 ribonucleotide-diphosphate reductase subunit beta YP_885432.1 1100553 D 246196 CDS YP_885433.1 118470775 4531139 1101597..1102979 1 NC_008596.1 identified by match to protein family HMM PF00756; esterase 1102979 4531139 MSMEG_1034 Mycobacterium smegmatis str. MC2 155 esterase YP_885433.1 1101597 D 246196 CDS YP_885434.1 118471711 4536436 1102979..1104559 1 NC_008596.1 hypothetical protein 1104559 4536436 MSMEG_1035 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885434.1 1102979 D 246196 CDS YP_885435.1 118468049 4534163 complement(1106170..1107219) 1 NC_008596.1 identified by match to protein family HMM PF00107; alcohol dehydrogenase 1107219 4534163 MSMEG_1037 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_885435.1 1106170 R 246196 CDS YP_885436.1 118469170 4534277 complement(1107407..1107682) 1 NC_008596.1 identified by match to protein family HMM PF03795; GTP cyclohydrolase II 1107682 4534277 MSMEG_1038 Mycobacterium smegmatis str. MC2 155 GTP cyclohydrolase II YP_885436.1 1107407 R 246196 CDS YP_885437.1 118471624 4536537 complement(1107692..1108765) 1 NC_008596.1 identified by match to protein family HMM PF01497; periplasmic binding protein 1108765 4536537 MSMEG_1039 Mycobacterium smegmatis str. MC2 155 periplasmic binding protein YP_885437.1 1107692 R 246196 CDS YP_885438.1 118470217 4533908 1110747..1111988 1 NC_008596.1 identified by match to protein family HMM PF00702; match to protein family HMM PF01842; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488; phosphoserine phosphatase 1111988 serB 4533908 serB Mycobacterium smegmatis str. MC2 155 phosphoserine phosphatase YP_885438.1 1110747 D 246196 CDS YP_885439.1 118468243 4537428 1112116..1112409 1 NC_008596.1 hypothetical protein 1112409 4537428 MSMEG_1042 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885439.1 1112116 D 246196 CDS YP_885440.1 118473983 4531427 complement(1112411..1113850) 1 NC_008596.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator 1113850 4531427 MSMEG_1043 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_885440.1 1112411 R 246196 CDS YP_885441.1 118468349 4533948 1113914..1114060 1 NC_008596.1 hypothetical protein 1114060 4533948 MSMEG_1044 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885441.1 1113914 D 246196 CDS YP_885442.1 118471605 4536556 1114057..1114752 1 NC_008596.1 identified by match to protein family HMM PF02588; integral membrane protein 1114752 4536556 MSMEG_1045 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_885442.1 1114057 D 246196 CDS YP_885443.1 118467925 4532658 1114707..1115555 1 NC_008596.1 identified by match to protein family HMM PF00005; molybdenum ABC transporter ATPase 1115555 4532658 MSMEG_1046 Mycobacterium smegmatis str. MC2 155 molybdenum ABC transporter ATPase YP_885443.1 1114707 D 246196 CDS YP_885444.1 118473609 4531044 1115548..1116369 1 NC_008596.1 identified by match to protein family HMM PF00293; nudix hydrolase 1116369 4531044 MSMEG_1047 Mycobacterium smegmatis str. MC2 155 nudix hydrolase YP_885444.1 1115548 D 246196 CDS YP_885445.1 118468676 4535899 1116366..1117073 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1117073 4535899 MSMEG_1048 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_885445.1 1116366 D 246196 CDS YP_885446.1 118470865 4536797 1117108..1118088 1 NC_008596.1 UbiE/COQ5 family methyltransferase 1118088 4536797 MSMEG_1049 Mycobacterium smegmatis str. MC2 155 UbiE/COQ5 family methyltransferase YP_885446.1 1117108 D 246196 CDS YP_885447.1 118471606 4536557 1118097..1119260 1 NC_008596.1 SAM-dependent methyltransferase 1119260 4536557 MSMEG_1050 Mycobacterium smegmatis str. MC2 155 SAM-dependent methyltransferase YP_885447.1 1118097 D 246196 CDS YP_885448.1 118470882 4537187 1119333..1120034 1 NC_008596.1 hypothetical protein 1120034 4537187 MSMEG_1051 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885448.1 1119333 D 246196 CDS YP_885449.1 118467579 4532869 complement(1120066..1121610) 1 NC_008596.1 identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; amino acid carrier protein 1121610 4532869 MSMEG_1052 Mycobacterium smegmatis str. MC2 155 amino acid carrier protein YP_885449.1 1120066 R 246196 CDS YP_885450.1 118472650 4535070 1121617..1121739 1 NC_008596.1 hypothetical protein 1121739 4535070 MSMEG_1054 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885450.1 1121617 D 246196 CDS YP_885451.1 118472970 4532309 complement(1121728..1123011) 1 NC_008596.1 hypothetical protein 1123011 4532309 MSMEG_1053 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885451.1 1121728 R 246196 CDS YP_885452.1 118469959 4530922 1123108..1123851 1 NC_008596.1 identified by match to protein family HMM PF00132; hexapeptide transferase 1123851 4530922 MSMEG_1055 Mycobacterium smegmatis str. MC2 155 hexapeptide transferase YP_885452.1 1123108 D 246196 CDS YP_885453.1 118468592 4532719 1124625..1125650 1 NC_008596.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase 1125650 fni 4532719 fni Mycobacterium smegmatis str. MC2 155 isopentenyl pyrophosphate isomerase YP_885453.1 1124625 D 246196 CDS YP_885454.1 118471937 4536199 1125683..1126309 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 1126309 4536199 MSMEG_1058 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_885454.1 1125683 D 246196 CDS YP_885455.1 118468671 4535894 complement(1126317..1127639) 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 1127639 4535894 MSMEG_1059 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_885455.1 1126317 R 246196 CDS YP_885456.1 118469619 4531591 complement(1127726..1128130) 1 NC_008596.1 Lsr2 protein 1128130 4531591 MSMEG_1060 Mycobacterium smegmatis str. MC2 155 Lsr2 protein YP_885456.1 1127726 R 246196 CDS YP_885457.1 118471488 4531890 complement(1128363..1128977) 1 NC_008596.1 identified by match to protein family HMM PF01243; phosphohydrolase 1128977 4531890 MSMEG_1061 Mycobacterium smegmatis str. MC2 155 phosphohydrolase YP_885457.1 1128363 R 246196 CDS YP_885458.1 118468985 4535095 complement(1129017..1130057) 1 NC_008596.1 identified by match to protein family HMM PF00501; O-succinylbenzoic acid--CoA ligase 1130057 4535095 MSMEG_1062 Mycobacterium smegmatis str. MC2 155 O-succinylbenzoic acid--CoA ligase YP_885458.1 1129017 R 246196 CDS YP_885459.1 118469236 4535372 complement(1130153..1130476) 1 NC_008596.1 hypothetical protein 1130476 4535372 MSMEG_1063 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885459.1 1130153 R 246196 CDS YP_885460.1 118471329 4534842 1130758..1132014 1 NC_008596.1 identified by match to protein family HMM PF01384; phosphate/sulfate permease 1132014 4534842 MSMEG_1064 Mycobacterium smegmatis str. MC2 155 phosphate/sulfate permease YP_885460.1 1130758 D 246196 CDS YP_885461.1 118473717 4536951 1132030..1132308 1 NC_008596.1 hypothetical protein 1132308 4536951 MSMEG_1065 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885461.1 1132030 D 246196 CDS YP_885462.1 118473520 4533882 1132310..1132621 1 NC_008596.1 hypothetical protein 1132621 4533882 MSMEG_1066 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885462.1 1132310 D 246196 CDS YP_885463.1 118469745 4532030 complement(1132639..1133010) 1 NC_008596.1 identified by match to protein family HMM PF00903; hypothetical protein 1133010 4532030 MSMEG_1067 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885463.1 1132639 R 246196 CDS YP_885464.1 118472886 4534029 complement(1133059..1134474) 1 NC_008596.1 identified by match to protein family HMM PF07905; regulatory protein 1134474 4534029 MSMEG_1068 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_885464.1 1133059 R 246196 CDS YP_885465.1 118473557 4532428 1134639..1136105 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 1136105 4532428 MSMEG_1069 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_885465.1 1134639 D 246196 CDS YP_885466.1 118467734 4534017 1136102..1136797 1 NC_008596.1 identified by match to protein family HMM PF00106; 3-oxoacyl-ACP reductase 1136797 4534017 MSMEG_1070 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_885466.1 1136102 D 246196 CDS YP_885467.1 118468253 4533986 1136794..1137555 1 NC_008596.1 identified by match to protein family HMM PF00106; 3-oxoacyl-ACP reductase 1137555 4533986 MSMEG_1071 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_885467.1 1136794 D 246196 CDS YP_885468.1 118469242 4535378 1137579..1138550 1 NC_008596.1 identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; agmatinase 1138550 speB 4535378 speB Mycobacterium smegmatis str. MC2 155 agmatinase YP_885468.1 1137579 D 246196 CDS YP_885469.1 118473318 4530977 1138540..1139403 1 NC_008596.1 identified by match to protein family HMM PF01522; polysaccharide deacetylase 1139403 4530977 MSMEG_1074 Mycobacterium smegmatis str. MC2 155 polysaccharide deacetylase YP_885469.1 1138540 D 246196 CDS YP_885470.1 118471221 4533824 complement(1139384..1140298) 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 1140298 4533824 MSMEG_1073 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_885470.1 1139384 R 246196 CDS YP_885471.1 118472778 4531869 complement(1140401..1141330) 1 NC_008596.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 1141330 menB 4531869 menB Mycobacterium smegmatis str. MC2 155 naphthoate synthase YP_885471.1 1140401 R 246196 CDS YP_885472.1 118471597 4536548 1141429..1141704 1 NC_008596.1 hypothetical protein 1141704 4536548 MSMEG_1076 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885472.1 1141429 D 246196 CDS YP_885473.1 118472307 4532895 complement(1141706..1142155) 1 NC_008596.1 identified by match to protein family HMM TIGR00026; hypothetical protein 1142155 4532895 MSMEG_1077 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885473.1 1141706 R 246196 CDS YP_885474.1 118472990 4532270 complement(1142177..1142866) 1 NC_008596.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; hydrolase 1142866 4532270 MSMEG_1078 Mycobacterium smegmatis str. MC2 155 hydrolase YP_885474.1 1142177 R 246196 CDS YP_885475.1 118467686 4537324 1143028..1143432 1 NC_008596.1 hypothetical protein 1143432 4537324 MSMEG_1079 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885475.1 1143028 D 246196 CDS YP_885476.1 118473611 4531046 1143429..1145873 1 NC_008596.1 large subunit of N,N-dimethylformamidase 1145873 4531046 MSMEG_1080 Mycobacterium smegmatis str. MC2 155 large subunit of N,N-dimethylformamidase YP_885476.1 1143429 D 246196 CDS YP_885477.1 118472233 4532454 1145899..1146657 1 NC_008596.1 hypothetical protein 1146657 4532454 MSMEG_1081 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885477.1 1145899 D 246196 CDS YP_885478.1 118471080 4537523 1146756..1147487 1 NC_008596.1 identified by match to protein family HMM PF00196; response regulator 1147487 4537523 MSMEG_1082 Mycobacterium smegmatis str. MC2 155 response regulator YP_885478.1 1146756 D 246196 CDS YP_885479.1 118468016 4533097 complement(1147565..1147696) 1 NC_008596.1 hypothetical protein 1147696 4533097 MSMEG_1083 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885479.1 1147565 R 246196 CDS YP_885480.1 118468882 4533767 1147718..1149322 1 NC_008596.1 identified by match to protein family HMM PF00496; peptide/opine/nickel uptake family protein ABC transporter periplasmic substrate-binding protein 1149322 4533767 MSMEG_1084 Mycobacterium smegmatis str. MC2 155 peptide/opine/nickel uptake family protein ABC transporter periplasmic substrate-binding protein YP_885480.1 1147718 D 246196 CDS YP_885481.1 118472494 4532445 1149333..1150292 1 NC_008596.1 identified by match to protein family HMM PF00528; dipeptide transporter permease DppB 1150292 4532445 MSMEG_1085 Mycobacterium smegmatis str. MC2 155 dipeptide transporter permease DppB YP_885481.1 1149333 D 246196 CDS YP_885482.1 118470904 4537578 1150289..1151224 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 1151224 4537578 MSMEG_1086 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_885482.1 1150289 D 246196 CDS YP_885483.1 118473135 4531196 1152901..1154301 1 NC_008596.1 identified by match to protein family HMM PF01425; glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase subunit alpha 1154301 gatA 4531196 gatA Mycobacterium smegmatis str. MC2 155 glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase subunit alpha YP_885483.1 1152901 D 246196 CDS YP_885484.1 118473889 4536584 1154316..1154507 1 NC_008596.1 hypothetical protein 1154507 4536584 MSMEG_1089 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885484.1 1154316 D 246196 CDS YP_885485.1 118468900 4536693 1154545..1155951 1 NC_008596.1 identified by match to protein family HMM PF01425; amidase 1155951 4536693 MSMEG_1090 Mycobacterium smegmatis str. MC2 155 amidase YP_885485.1 1154545 D 246196 CDS YP_885486.1 118472340 4534231 1155953..1156411 1 NC_008596.1 involved in the assembly of the urease metallocenter; nickel donor; urease accessory protein UreE 1156411 ureE 4534231 ureE Mycobacterium smegmatis str. MC2 155 urease accessory protein UreE YP_885486.1 1155953 D 246196 CDS YP_885487.1 118470800 4536084 1156408..1157070 1 NC_008596.1 identified by match to protein family HMM PF01730; urease accessory protein UreF 1157070 4536084 MSMEG_1092 Mycobacterium smegmatis str. MC2 155 urease accessory protein UreF YP_885487.1 1156408 D 246196 CDS YP_885488.1 118471718 4536404 1157081..1157737 1 NC_008596.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; bifunctional urease subunit gamma/beta 1157737 4536404 MSMEG_1093 Mycobacterium smegmatis str. MC2 155 bifunctional urease subunit gamma/beta YP_885488.1 1157081 D 246196 CDS YP_885489.1 118472448 4533589 1157739..1159445 1 NC_008596.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 1159445 ureC 4533589 ureC Mycobacterium smegmatis str. MC2 155 urease subunit alpha YP_885489.1 1157739 D 246196 CDS YP_885490.1 118467926 4532659 1159442..1160059 1 NC_008596.1 identified by match to protein family HMM PF02492; match to protein family HMM TIGR00101; urease accessory protein UreG 1160059 ureG 4532659 ureG Mycobacterium smegmatis str. MC2 155 urease accessory protein UreG YP_885490.1 1159442 D 246196 CDS YP_885491.1 118471464 4534383 1160056..1160871 1 NC_008596.1 urease accessory protein UreD 1160871 4534383 MSMEG_1096 Mycobacterium smegmatis str. MC2 155 urease accessory protein UreD YP_885491.1 1160056 D 246196 CDS YP_885492.1 118469215 4533269 1160901..1161584 1 NC_008596.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 1161584 4533269 MSMEG_1097 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_885492.1 1160901 D 246196 CDS YP_885493.1 118471378 4534972 complement(1161655..1163274) 1 NC_008596.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 1163274 4534972 MSMEG_1098 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_885493.1 1161655 R 246196 CDS YP_885494.1 118467534 4535996 complement(1163456..1163758) 1 NC_008596.1 hypothetical protein 1163758 4535996 MSMEG_1099 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885494.1 1163456 R 246196 CDS YP_885495.1 118470182 4530817 complement(1163698..1164150) 1 NC_008596.1 identified by match to protein family HMM PF04946; DGPFAETKE domain-containing protein 1164150 4530817 MSMEG_1100 Mycobacterium smegmatis str. MC2 155 DGPFAETKE domain-containing protein YP_885495.1 1163698 R 246196 CDS YP_885496.1 118469803 4535944 1164280..1165446 1 NC_008596.1 hypothetical protein 1165446 4535944 MSMEG_1101 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885496.1 1164280 D 246196 CDS YP_885497.1 118473346 4532012 1165456..1167066 1 NC_008596.1 identified by match to protein family HMM PF07969; twin-arginine translocation pathway signal 1167066 4532012 MSMEG_1102 Mycobacterium smegmatis str. MC2 155 twin-arginine translocation pathway signal YP_885497.1 1165456 D 246196 CDS YP_885498.1 118472120 4532162 1167087..1168052 1 NC_008596.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase 1168052 4532162 MSMEG_1103 Mycobacterium smegmatis str. MC2 155 O-succinylbenzoate synthase YP_885498.1 1167087 D 246196 CDS YP_885499.1 118469132 4532548 1168409..1168600 1 NC_008596.1 hypothetical protein 1168600 4532548 MSMEG_1104 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885499.1 1168409 D 246196 CDS YP_885500.1 118471063 4537136 1169847..1170854 1 NC_008596.1 identified by match to protein family HMM PF00165; match to protein family HMM PF01965; AraC family transcriptional regulator 1170854 4537136 MSMEG_1106 Mycobacterium smegmatis str. MC2 155 AraC family transcriptional regulator YP_885500.1 1169847 D 246196 CDS YP_885501.1 118471850 4536265 1170870..1171601 1 NC_008596.1 identified by match to protein family HMM PF01965; isonitrile hydratase 1171601 4536265 MSMEG_1107 Mycobacterium smegmatis str. MC2 155 isonitrile hydratase YP_885501.1 1170870 D 246196 CDS YP_885502.1 118473645 4533513 1171579..1172457 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 1172457 4533513 MSMEG_1108 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_885502.1 1171579 D 246196 CDS YP_885503.1 118471524 4537235 1172457..1174100 1 NC_008596.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 1174100 4537235 MSMEG_1109 Mycobacterium smegmatis str. MC2 155 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_885503.1 1172457 D 246196 CDS YP_885504.1 118472595 4536873 1174103..1174594 1 NC_008596.1 transmembrane protein 1174594 4536873 MSMEG_1110 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_885504.1 1174103 D 246196 CDS YP_885505.1 118469901 4533220 complement(1174598..1175296) 1 NC_008596.1 hypothetical protein 1175296 4533220 MSMEG_1111 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885505.1 1174598 R 246196 CDS YP_885506.1 118469174 4534281 1175363..1176490 1 NC_008596.1 identified by match to protein family HMM PF00534; glycosyl transferase family protein 1176490 4534281 MSMEG_1113 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_885506.1 1175363 D 246196 CDS YP_885507.1 118467554 4535508 complement(1176487..1178451) 1 NC_008596.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1178451 4535508 MSMEG_1112 Mycobacterium smegmatis str. MC2 155 aconitate hydratase YP_885507.1 1176487 R 246196 CDS YP_885508.1 118468640 4533572 complement(1178579..1179403) 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 1179403 4533572 MSMEG_1114 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_885508.1 1178579 R 246196 CDS YP_885509.1 118470851 4534306 1179533..1180222 1 NC_008596.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 1180222 ubiE 4534306 ubiE Mycobacterium smegmatis str. MC2 155 ubiquinone/menaquinone biosynthesis methyltransferase YP_885509.1 1179533 D 246196 CDS YP_885510.1 118469757 4532821 complement(1180363..1181715) 1 NC_008596.1 identified by match to protein family HMM PF00120; gamma-glutamylisopropylamide synthetase 1181715 4532821 MSMEG_1116 Mycobacterium smegmatis str. MC2 155 gamma-glutamylisopropylamide synthetase YP_885510.1 1180363 R 246196 CDS YP_885511.1 118471555 4532203 1181811..1182530 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptional regulator 1182530 4532203 MSMEG_1117 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_885511.1 1181811 D 246196 CDS YP_885512.1 118473977 4531421 1182618..1184153 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 1184153 4531421 MSMEG_1118 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_885512.1 1182618 D 246196 CDS YP_885513.1 118471203 4531497 1184153..1184869 1 NC_008596.1 identified by match to protein family HMM PF00117; match to protein family HMM PF07722; glutamine amidotransferase 1184869 4531497 MSMEG_1119 Mycobacterium smegmatis str. MC2 155 glutamine amidotransferase YP_885513.1 1184153 D 246196 CDS YP_885514.1 118469296 4532635 1184860..1185837 1 NC_008596.1 identified by match to protein family HMM PF00795; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1185837 4532635 MSMEG_1120 Mycobacterium smegmatis str. MC2 155 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_885514.1 1184860 D 246196 CDS YP_885515.1 118470099 4534934 1185840..1186217 1 NC_008596.1 hypothetical protein 1186217 4534934 MSMEG_1121 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885515.1 1185840 D 246196 CDS YP_885516.1 118467372 4534057 complement(1186298..1186426) 1 NC_008596.1 hypothetical protein 1186426 4534057 MSMEG_1122 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885516.1 1186298 R 246196 CDS YP_885517.1 118471498 4536837 1186442..1187440 1 NC_008596.1 identified by match to protein family HMM PF02492; match to protein family HMM PF07683; cobalamin synthesis protein 1187440 4536837 MSMEG_1123 Mycobacterium smegmatis str. MC2 155 cobalamin synthesis protein YP_885517.1 1186442 D 246196 CDS YP_885518.1 118470782 4531146 1187553..1187897 1 NC_008596.1 identified by match to protein family HMM PF00037; ferredoxin FdxA 1187897 4531146 MSMEG_1124 Mycobacterium smegmatis str. MC2 155 ferredoxin FdxA YP_885518.1 1187553 D 246196 CDS YP_885519.1 118473036 4533189 1187897..1188550 1 NC_008596.1 identified by match to protein family HMM PF01726; ArsR family transcriptional regulator 1188550 4533189 MSMEG_1125 Mycobacterium smegmatis str. MC2 155 ArsR family transcriptional regulator YP_885519.1 1187897 D 246196 CDS YP_885520.1 118472608 4536886 1188580..1188864 1 NC_008596.1 hypothetical protein 1188864 4536886 MSMEG_1126 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885520.1 1188580 D 246196 CDS YP_885521.1 118471142 4531829 1188880..1189476 1 NC_008596.1 transmembrane protein 1189476 4531829 MSMEG_1127 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_885521.1 1188880 D 246196 CDS YP_885522.1 118472107 4537488 complement(1189652..1189771) 1 NC_008596.1 hypothetical protein 1189771 4537488 MSMEG_1128 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885522.1 1189652 R 246196 CDS YP_885523.1 118473472 4531174 1189972..1191243 1 NC_008596.1 identified by match to protein family HMM PF01266; D-amino-acid dehydrogenase 1191243 4531174 MSMEG_1129 Mycobacterium smegmatis str. MC2 155 D-amino-acid dehydrogenase YP_885523.1 1189972 D 246196 CDS YP_885524.1 118467816 4534567 1191772..1192899 1 NC_008596.1 hypothetical protein 1192899 4534567 MSMEG_1130 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885524.1 1191772 D 246196 CDS YP_885525.1 118473690 4531087 1192990..1193475 1 NC_008596.1 identified by match to protein family HMM PF03073; tryptophan-rich sensory protein 1193475 4531087 MSMEG_1131 Mycobacterium smegmatis str. MC2 155 tryptophan-rich sensory protein YP_885525.1 1192990 D 246196 CDS YP_885526.1 118470409 4534182 complement(1193567..1194796) 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF04820; match to protein family HMM PF05834; match to protein family HMM PF07992; match to protein family HMM TIGR02032; FAD binding domain-containing protein 1194796 4534182 MSMEG_1132 Mycobacterium smegmatis str. MC2 155 FAD binding domain-containing protein YP_885526.1 1193567 R 246196 CDS YP_885527.1 118469870 4536561 1194836..1195825 1 NC_008596.1 identified by match to protein family HMM PF00348; bifunctional short chain isoprenyl diphosphate synthase 1195825 4536561 MSMEG_1133 Mycobacterium smegmatis str. MC2 155 bifunctional short chain isoprenyl diphosphate synthase YP_885527.1 1194836 D 246196 CDS YP_885528.1 118470983 4531903 1195912..1196799 1 NC_008596.1 metalloprotease; heat shock protein HtpX 1196799 4531903 MSMEG_1134 Mycobacterium smegmatis str. MC2 155 heat shock protein HtpX YP_885528.1 1195912 D 246196 CDS YP_885529.1 118473232 4536919 1197495..1197794 1 NC_008596.1 hypothetical protein 1197794 4536919 MSMEG_1135 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885529.1 1197495 D 246196 CDS YP_885530.1 118471911 4536212 1197841..1198365 1 NC_008596.1 hypothetical protein 1198365 4536212 MSMEG_1136 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885530.1 1197841 D 246196 CDS YP_885531.1 118467712 4537720 complement(1198367..1199806) 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 1199806 4537720 MSMEG_1137 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_885531.1 1198367 R 246196 CDS YP_885532.1 118473095 4531156 complement(1199825..1200961) 1 NC_008596.1 identified by match to protein family HMM PF00107; alcohol dehydrogenase 1200961 4531156 MSMEG_1138 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_885532.1 1199825 R 246196 CDS YP_885533.1 118471236 4534423 1201113..1201682 1 NC_008596.1 identified by match to protein family HMM PF01381; match to protein family HMM PF07883; transcriptional regulator 1201682 4534423 MSMEG_1139 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_885533.1 1201113 D 246196 CDS YP_885534.1 118471985 4536132 complement(1201699..1202724) 1 NC_008596.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1202724 4536132 MSMEG_1140 Mycobacterium smegmatis str. MC2 155 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_885534.1 1201699 R 246196 CDS YP_885535.1 118469389 4532283 1203291..1204160 1 NC_008596.1 identified by match to protein family HMM PF02405; ABC transporter 1204160 4532283 MSMEG_1141 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_885535.1 1203291 D 246196 CDS YP_885536.1 118469400 4531952 1204162..1205019 1 NC_008596.1 identified by match to protein family HMM PF02405; ABC transporter 1205019 4531952 MSMEG_1142 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_885536.1 1204162 D 246196 CDS YP_885537.1 118472932 4531221 1205021..1206625 1 NC_008596.1 identified by match to protein family HMM PF02470; mce related protein 1206625 4531221 MSMEG_1143 Mycobacterium smegmatis str. MC2 155 mce related protein YP_885537.1 1205021 D 246196 CDS YP_885538.1 118472058 4536698 1206622..1207677 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 1207677 4536698 MSMEG_1144 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_885538.1 1206622 D 246196 CDS YP_885539.1 118469321 4533386 1207670..1208710 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 1208710 4533386 MSMEG_1145 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_885539.1 1207670 D 246196 CDS YP_885540.1 118468242 4537427 1208707..1209828 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 1209828 4537427 MSMEG_1146 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_885540.1 1208707 D 246196 CDS YP_885541.1 118472982 4532262 1209825..1211105 1 NC_008596.1 identified by match to protein family HMM PF02470; mce related protein 1211105 4532262 MSMEG_1147 Mycobacterium smegmatis str. MC2 155 mce related protein YP_885541.1 1209825 D 246196 CDS YP_885542.1 118471128 4531815 1211102..1212358 1 NC_008596.1 identified by match to protein family HMM PF02470; mce related protein 1212358 4531815 MSMEG_1148 Mycobacterium smegmatis str. MC2 155 mce related protein YP_885542.1 1211102 D 246196 CDS YP_885543.1 118473928 4537366 1212385..1213071 1 NC_008596.1 hypothetical protein 1213071 4537366 MSMEG_1149 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885543.1 1212385 D 246196 CDS YP_885544.1 118473400 4537018 1213041..1213862 1 NC_008596.1 hypothetical protein 1213862 4537018 MSMEG_1150 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885544.1 1213041 D 246196 CDS YP_885545.1 118472418 4531340 1214090..1214695 1 NC_008596.1 identified by match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding protein 1214695 4531340 MSMEG_1151 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_885545.1 1214090 D 246196 CDS YP_885546.1 118468532 4535357 1214846..1216132 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; citrate-proton symporter 1216132 4535357 MSMEG_1152 Mycobacterium smegmatis str. MC2 155 citrate-proton symporter YP_885546.1 1214846 D 246196 CDS YP_885547.1 118470362 4534637 1216141..1217541 1 NC_008596.1 identified by match to protein family HMM PF00890; match to protein family HMM PF01266; FAD dependent oxidoreductase 1217541 4534637 MSMEG_1153 Mycobacterium smegmatis str. MC2 155 FAD dependent oxidoreductase YP_885547.1 1216141 D 246196 CDS YP_885548.1 118467975 4535157 1217538..1218719 1 NC_008596.1 identified by match to protein family HMM PF02515; formyl-coenzyme A transferase 1218719 4535157 MSMEG_1154 Mycobacterium smegmatis str. MC2 155 formyl-coenzyme A transferase YP_885548.1 1217538 D 246196 CDS YP_885549.1 118469024 4530876 1218716..1219522 1 NC_008596.1 identified by match to protein family HMM PF00378; carnitinyl-CoA dehydratase 1219522 4530876 MSMEG_1155 Mycobacterium smegmatis str. MC2 155 carnitinyl-CoA dehydratase YP_885549.1 1218716 D 246196 CDS YP_885550.1 118473816 4531626 1219519..1220406 1 NC_008596.1 identified by match to protein family HMM PF00701; dihydrodipicolinate synthetase 1220406 4531626 MSMEG_1156 Mycobacterium smegmatis str. MC2 155 dihydrodipicolinate synthetase YP_885550.1 1219519 D 246196 CDS YP_885551.1 118470998 4533491 1220407..1221180 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 1221180 4533491 MSMEG_1157 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_885551.1 1220407 D 246196 CDS YP_885552.1 118469092 4537648 1221223..1222650 1 NC_008596.1 identified by match to protein family HMM PF00171; 5-oxovalerate dehydrogenase 1222650 4537648 MSMEG_1158 Mycobacterium smegmatis str. MC2 155 5-oxovalerate dehydrogenase YP_885552.1 1221223 D 246196 CDS YP_885553.1 118470585 4531372 1222785..1223855 1 NC_008596.1 ABC transporter 1223855 4531372 MSMEG_1159 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_885553.1 1222785 D 246196 CDS YP_885554.1 118472380 4534770 1223852..1224655 1 NC_008596.1 identified by match to protein family HMM PF00005; nitrate/sulfonate/bicarbonate ABC transporter ATPase 1224655 4534770 MSMEG_1160 Mycobacterium smegmatis str. MC2 155 nitrate/sulfonate/bicarbonate ABC transporter ATPase YP_885554.1 1223852 D 246196 CDS YP_885555.1 118473365 4530841 1224687..1225493 1 NC_008596.1 identified by match to protein family HMM PF00528; taurine transporter permease TauC 1225493 4530841 MSMEG_1161 Mycobacterium smegmatis str. MC2 155 taurine transporter permease TauC YP_885555.1 1224687 D 246196 CDS YP_885556.1 118471275 4532149 1225516..1226862 1 NC_008596.1 nitrilotriacetate monooxygenase component A 1226862 4532149 MSMEG_1162 Mycobacterium smegmatis str. MC2 155 nitrilotriacetate monooxygenase component A YP_885556.1 1225516 D 246196 CDS YP_885557.1 118470960 4534532 1226859..1226981 1 NC_008596.1 hypothetical protein 1226981 4534532 MSMEG_1163 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885557.1 1226859 D 246196 CDS YP_885558.1 118470647 4532406 complement(1227792..1228283) 1 NC_008596.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 1228283 4532406 MSMEG_1165 Mycobacterium smegmatis str. MC2 155 nucleotide-binding protein YP_885558.1 1227792 R 246196 CDS YP_885559.1 118468727 4532797 complement(1228550..1229989) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 1229989 4532797 MSMEG_1167 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_885559.1 1228550 R 246196 CDS YP_885560.1 118473067 4534619 1230134..1230784 1 NC_008596.1 transcriptional regulator 1230784 4534619 MSMEG_1168 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_885560.1 1230134 D 246196 CDS YP_885561.1 118469256 4531548 1230896..1232140 1 NC_008596.1 identified by match to protein family HMM PF07690; integral membrane transporter 1232140 4531548 MSMEG_1169 Mycobacterium smegmatis str. MC2 155 integral membrane transporter YP_885561.1 1230896 D 246196 CDS YP_885562.1 118470650 4532409 1232200..1232415 1 NC_008596.1 hypothetical protein 1232415 4532409 MSMEG_1170 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885562.1 1232200 D 246196 CDS YP_885563.1 118468770 4535661 complement(1232517..1232927) 1 NC_008596.1 identified by match to protein family HMM PF01451; low molecular weight phosphotyrosine protein phosphatase 1232927 4535661 MSMEG_1171 Mycobacterium smegmatis str. MC2 155 low molecular weight phosphotyrosine protein phosphatase YP_885563.1 1232517 R 246196 CDS YP_885564.1 118467822 4534573 complement(1232924..1234000) 1 NC_008596.1 identified by match to protein family HMM PF01758; match to protein family HMM TIGR00832; arsenic resistance protein 1234000 arsB 4534573 arsB Mycobacterium smegmatis str. MC2 155 arsenic resistance protein YP_885564.1 1232924 R 246196 CDS YP_885565.1 118472746 4531935 complement(1233997..1234368) 1 NC_008596.1 identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 1234368 4531935 MSMEG_1173 Mycobacterium smegmatis str. MC2 155 ArsR family transcriptional regulator YP_885565.1 1233997 R 246196 CDS YP_885566.1 118471797 4536329 complement(1234447..1234911) 1 NC_008596.1 identified by match to protein family HMM PF00903; cadmium inducible protein cadi 1234911 4536329 MSMEG_1174 Mycobacterium smegmatis str. MC2 155 cadmium inducible protein cadi YP_885566.1 1234447 R 246196 CDS YP_885567.1 118470033 4531648 1235012..1235371 1 NC_008596.1 identified by match to protein family HMM PF01022; transcriptional regulatory protein 1235371 4531648 MSMEG_1175 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_885567.1 1235012 D 246196 CDS YP_885568.1 118468397 4534786 1235405..1236928 1 NC_008596.1 hypothetical protein 1236928 4534786 MSMEG_1176 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885568.1 1235405 D 246196 CDS YP_885569.1 118467416 4536032 complement(1236938..1238374) 1 NC_008596.1 identified by match to protein family HMM PF02133; cytosine/purines uracil thiamine allantoin permease 1238374 4536032 MSMEG_1177 Mycobacterium smegmatis str. MC2 155 cytosine/purines uracil thiamine allantoin permease YP_885569.1 1236938 R 246196 CDS YP_885570.1 118471903 4536241 1238701..1239618 1 NC_008596.1 identified by match to protein family HMM PF01418; transcriptional regulator 1239618 4536241 MSMEG_1178 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_885570.1 1238701 D 246196 CDS YP_885571.1 118469805 4535946 1239680..1241338 1 NC_008596.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 1241338 hutU 4535946 hutU Mycobacterium smegmatis str. MC2 155 urocanate hydratase YP_885571.1 1239680 D 246196 CDS YP_885572.1 118473390 4537008 1241335..1242549 1 NC_008596.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1242549 4537008 MSMEG_1180 Mycobacterium smegmatis str. MC2 155 allantoate amidohydrolase YP_885572.1 1241335 D 246196 CDS YP_885573.1 118472472 4533838 1242546..1243877 1 NC_008596.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase 1243877 hutF 4533838 hutF Mycobacterium smegmatis str. MC2 155 N-formimino-L-glutamate deiminase YP_885573.1 1242546 D 246196 CDS YP_885574.1 118469350 4533173 1243874..1245064 1 NC_008596.1 catalyzes the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 1245064 hutI 4533173 hutI Mycobacterium smegmatis str. MC2 155 imidazolonepropionase YP_885574.1 1243874 D 246196 CDS YP_885575.1 118471752 4536399 1245061..1246605 1 NC_008596.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 1246605 hutH 4536399 hutH Mycobacterium smegmatis str. MC2 155 histidine ammonia-lyase YP_885575.1 1245061 D 246196 CDS YP_885576.1 118472818 4536672 1246704..1247582 1 NC_008596.1 identified by match to protein family HMM PF01083; serine esterase, cutinase 1247582 4536672 MSMEG_1184 Mycobacterium smegmatis str. MC2 155 serine esterase, cutinase YP_885576.1 1246704 D 246196 CDS YP_885577.1 118468897 4536690 complement(1247625..1248647) 1 NC_008596.1 identified by match to protein family HMM PF01037; AsnC family transcriptional regulator 1248647 4536690 MSMEG_1185 Mycobacterium smegmatis str. MC2 155 AsnC family transcriptional regulator YP_885577.1 1247625 R 246196 CDS YP_885578.1 118471732 4536418 1248910..1250229 1 NC_008596.1 identified by match to protein family HMM PF03553; match to protein family HMM PF03600; permease 1250229 4536418 MSMEG_1186 Mycobacterium smegmatis str. MC2 155 permease YP_885578.1 1248910 D 246196 CDS YP_885579.1 118470717 4533932 1250238..1251833 1 NC_008596.1 identified by match to protein family HMM PF01979; match to protein family HMM PF07908; match to protein family HMM PF07969; N-acyl-D-aspartate deacylase 1251833 4533932 MSMEG_1187 Mycobacterium smegmatis str. MC2 155 N-acyl-D-aspartate deacylase YP_885579.1 1250238 D 246196 CDS YP_885580.1 118472679 4532944 complement(1251852..1253759) 1 NC_008596.1 hypothetical protein 1253759 4532944 MSMEG_1188 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885580.1 1251852 R 246196 CDS YP_885581.1 118472057 4536697 1253948..1255630 1 NC_008596.1 hypothetical protein 1255630 4536697 MSMEG_1189 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885581.1 1253948 D 246196 CDS YP_885582.1 118472741 4532370 1255770..1257644 1 NC_008596.1 identified by match to protein family HMM PF00069; serine/threonine protein kinase 1257644 4532370 MSMEG_1190 Mycobacterium smegmatis str. MC2 155 serine/threonine protein kinase YP_885582.1 1255770 D 246196 CDS YP_885583.1 118471168 4534954 complement(1257700..1257921) 1 NC_008596.1 hypothetical protein 1257921 4534954 MSMEG_1191 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885583.1 1257700 R 246196 CDS YP_885584.1 118468737 4534265 complement(1257963..1259165) 1 NC_008596.1 identified by match to protein family HMM PF01551; M23 peptidase domain-containing protein 1259165 4534265 MSMEG_1192 Mycobacterium smegmatis str. MC2 155 M23 peptidase domain-containing protein YP_885584.1 1257963 R 246196 CDS YP_885585.1 118473054 4534606 1259580..1261274 1 NC_008596.1 identified by match to protein family HMM PF05731; TROVE domain-containing protein 1261274 4534606 MSMEG_1193 Mycobacterium smegmatis str. MC2 155 TROVE domain-containing protein YP_885585.1 1259580 D 246196 CDS YP_885586.1 118467350 4534709 complement(1261318..1261740) 1 NC_008596.1 hypothetical protein 1261740 4534709 MSMEG_1194 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885586.1 1261318 R 246196 CDS YP_885587.1 118473849 4533549 1261917..1263128 1 NC_008596.1 hypothetical protein 1263128 4533549 MSMEG_1195 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885587.1 1261917 D 246196 CDS YP_885588.1 118468269 4534002 complement(1263197..1265188) 1 NC_008596.1 identified by match to protein family HMM PF00176; SNF2 domain-containing protein 1265188 4534002 MSMEG_1196 Mycobacterium smegmatis str. MC2 155 SNF2 domain-containing protein YP_885588.1 1263197 R 246196 CDS YP_885589.1 118472056 4536696 complement(1265252..1265509) 1 NC_008596.1 identified by match to protein family HMM PF00196; LuxR family transcriptional regulator 1265509 4536696 MSMEG_1197 Mycobacterium smegmatis str. MC2 155 LuxR family transcriptional regulator YP_885589.1 1265252 R 246196 CDS YP_885590.1 118471832 4536286 1265675..1266436 1 NC_008596.1 hypothetical protein 1266436 4536286 MSMEG_1198 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885590.1 1265675 D 246196 CDS YP_885591.1 118473157 4532598 complement(1266507..1268882) 1 NC_008596.1 identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374; hypothetical protein 1268882 4532598 MSMEG_1199 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885591.1 1266507 R 246196 CDS YP_885592.1 118467837 4535464 1269105..1270931 1 NC_008596.1 identified by match to protein family HMM PF00069; match to protein family HMM PF00497; serine/threonine protein kinase 1270931 4535464 MSMEG_1200 Mycobacterium smegmatis str. MC2 155 serine/threonine protein kinase YP_885592.1 1269105 D 246196 CDS YP_885593.1 118470520 4536112 complement(1270939..1271619) 1 NC_008596.1 hypothetical protein 1271619 4536112 MSMEG_1201 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885593.1 1270939 R 246196 CDS YP_885594.1 118473065 4534617 1271693..1271971 1 NC_008596.1 hypothetical protein 1271971 4534617 MSMEG_1202 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885594.1 1271693 D 246196 CDS YP_885595.1 118471865 4536280 1272165..1273415 1 NC_008596.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 1273415 4536280 MSMEG_1204 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP synthase YP_885595.1 1272165 D 246196 CDS YP_885596.1 118471800 4536332 complement(1273412..1274296) 1 NC_008596.1 identified by match to protein family HMM PF02353; methoxy mycolic acid synthase 1 1274296 4536332 MSMEG_1203 Mycobacterium smegmatis str. MC2 155 methoxy mycolic acid synthase 1 YP_885596.1 1273412 R 246196 CDS YP_885597.1 118472911 4533780 complement(1274296..1275219) 1 NC_008596.1 identified by match to protein family HMM PF02353; cyclopropane-fatty-acyl-phospholipid synthase 1275219 4533780 MSMEG_1205 Mycobacterium smegmatis str. MC2 155 cyclopropane-fatty-acyl-phospholipid synthase YP_885597.1 1274296 R 246196 CDS YP_885598.1 118473578 4531012 complement(1275439..1275573) 1 NC_008596.1 hypothetical protein 1275573 4531012 MSMEG_1206 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885598.1 1275439 R 246196 CDS YP_885599.1 118471803 4536335 1276157..1277335 1 NC_008596.1 identified by match to protein family HMM PF00534; glycosyltransferase, group I 1277335 4536335 MSMEG_1207 Mycobacterium smegmatis str. MC2 155 glycosyltransferase, group I YP_885599.1 1276157 D 246196 CDS YP_885600.1 118473239 4536926 1277332..1278369 1 NC_008596.1 glycosyltransferase, group I 1278369 4536926 MSMEG_1208 Mycobacterium smegmatis str. MC2 155 glycosyltransferase, group I YP_885600.1 1277332 D 246196 CDS YP_885601.1 118468936 4537470 1278387..1279841 1 NC_008596.1 identified by match to protein family HMM PF04041; glycosidase 1279841 4537470 MSMEG_1209 Mycobacterium smegmatis str. MC2 155 glycosidase YP_885601.1 1278387 D 246196 CDS YP_885602.1 118470413 4534186 complement(1279842..1280711) 1 NC_008596.1 identified by match to protein family HMM PF01936; hypothetical protein 1280711 4534186 MSMEG_1210 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885602.1 1279842 R 246196 CDS YP_885603.1 118469459 4535722 1280838..1281929 1 NC_008596.1 identified by match to protein family HMM PF00487; Fatty acid desaturase 1281929 4535722 MSMEG_1211 Mycobacterium smegmatis str. MC2 155 Fatty acid desaturase YP_885603.1 1280838 D 246196 CDS YP_885604.1 118468992 4535102 1282273..1282482 1 NC_008596.1 hypothetical protein 1282482 4535102 MSMEG_1212 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885604.1 1282273 D 246196 CDS YP_885605.1 118467999 4531319 1282629..1283942 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 monooxygenase 1283942 4531319 MSMEG_1213 Mycobacterium smegmatis str. MC2 155 cytochrome P450 monooxygenase YP_885605.1 1282629 D 246196 CDS YP_885606.1 118472023 4534103 1283977..1284996 1 NC_008596.1 identified by match to protein family HMM PF07995; oxidoreductase 1284996 4534103 MSMEG_1214 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_885606.1 1283977 D 246196 CDS YP_885607.1 118471244 4531520 1285067..1285705 1 NC_008596.1 serine/threonine protein kinase 1285705 4531520 MSMEG_1215 Mycobacterium smegmatis str. MC2 155 serine/threonine protein kinase YP_885607.1 1285067 D 246196 CDS YP_885608.1 118469177 4534284 complement(1285707..1287002) 1 NC_008596.1 identified by match to protein family HMM PF01094; ABC transporter periplasmic protein 1287002 4534284 MSMEG_1216 Mycobacterium smegmatis str. MC2 155 ABC transporter periplasmic protein YP_885608.1 1285707 R 246196 CDS YP_885609.1 118473261 4537691 complement(1287035..1287748) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1287748 4537691 MSMEG_1217 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_885609.1 1287035 R 246196 CDS YP_885610.1 118473873 4531121 complement(1287741..1288457) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1288457 4531121 MSMEG_1218 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_885610.1 1287741 R 246196 CDS YP_885611.1 118468073 4533020 complement(1288454..1289461) 1 NC_008596.1 identified by match to protein family HMM PF02653; ABC transporter permease 1289461 4533020 MSMEG_1219 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_885611.1 1288454 R 246196 CDS YP_885612.1 118473141 4531202 complement(1289458..1290333) 1 NC_008596.1 identified by match to protein family HMM PF02653; ABC transporter permease 1290333 4531202 MSMEG_1220 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_885612.1 1289458 R 246196 CDS YP_885613.1 118469048 4536862 1290581..1291009 1 NC_008596.1 rifampin ADP-ribosyl transferase 1291009 4536862 MSMEG_1221 Mycobacterium smegmatis str. MC2 155 rifampin ADP-ribosyl transferase YP_885613.1 1290581 D 246196 CDS YP_885614.1 118472621 4537271 complement(1291202..1292839) 1 NC_008596.1 identified by similarity to GP:2935133; match to protein family HMM PF01609; ISMsm6, transposase 1292839 4537271 MSMEG_1222 Mycobacterium smegmatis str. MC2 155 ISMsm6, transposase YP_885614.1 1291202 R 246196 CDS YP_885615.1 118468271 4535758 1292948..1293064 1 NC_008596.1 rifampin ADP-ribosyl transferase 1293064 4535758 MSMEG_1224 Mycobacterium smegmatis str. MC2 155 rifampin ADP-ribosyl transferase YP_885615.1 1292948 D 246196 CDS YP_885616.1 118471211 4533813 complement(1293051..1293362) 1 NC_008596.1 hypothetical protein 1293362 4533813 MSMEG_1223 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885616.1 1293051 R 246196 CDS YP_885617.1 118473614 4531049 complement(1294590..1295882) 1 NC_008596.1 hypothetical protein 1295882 4531049 MSMEG_1225 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885617.1 1294590 R 246196 CDS YP_885618.1 118469714 4537219 1295995..1296870 1 NC_008596.1 identified by match to protein family HMM PF03781; sulfatase-modifying factor 1 1296870 4537219 MSMEG_1226 Mycobacterium smegmatis str. MC2 155 sulfatase-modifying factor 1 YP_885618.1 1295995 D 246196 CDS YP_885619.1 118472592 4536870 1297094..1297819 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07702; GntR family transcriptional regulator 1297819 4536870 MSMEG_1227 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_885619.1 1297094 D 246196 CDS YP_885620.1 118471747 4536394 1297882..1299234 1 NC_008596.1 identified by match to protein family HMM PF00884; sulfatase 1299234 4536394 MSMEG_1228 Mycobacterium smegmatis str. MC2 155 sulfatase YP_885620.1 1297882 D 246196 CDS YP_885621.1 118470463 4534526 1299255..1301174 1 NC_008596.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 1301174 gyrB 4534526 gyrB Mycobacterium smegmatis str. MC2 155 DNA gyrase subunit B YP_885621.1 1299255 D 246196 CDS YP_885622.1 118473401 4537019 complement(1301175..1301498) 1 NC_008596.1 hypothetical protein 1301498 4537019 MSMEG_1230 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885622.1 1301175 R 246196 CDS YP_885623.1 118472452 4533593 complement(1301495..1301863) 1 NC_008596.1 identified by match to protein family HMM PF02656; inner membrane protein YidH 1301863 4533593 MSMEG_1231 Mycobacterium smegmatis str. MC2 155 inner membrane protein YidH YP_885623.1 1301495 R 246196 CDS YP_885624.1 118467957 4532068 1302007..1303464 1 NC_008596.1 ABC transporter substrate-binding protein 1303464 4532068 MSMEG_1232 Mycobacterium smegmatis str. MC2 155 ABC transporter substrate-binding protein YP_885624.1 1302007 D 246196 CDS YP_885625.1 118468857 4535630 1304379..1305128 1 NC_008596.1 identified by match to protein family HMM PF00005; taurine import ATP-binding protein TauB 1305128 4535630 MSMEG_1234 Mycobacterium smegmatis str. MC2 155 taurine import ATP-binding protein TauB YP_885625.1 1304379 D 246196 CDS YP_885626.1 118470583 4531370 1305154..1306650 1 NC_008596.1 identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740; sulfate permease 1306650 4531370 MSMEG_1235 Mycobacterium smegmatis str. MC2 155 sulfate permease YP_885626.1 1305154 D 246196 CDS YP_885627.1 118469809 4535950 complement(1306698..1307345) 1 NC_008596.1 Mpr protein 1307345 4535950 MSMEG_1236 Mycobacterium smegmatis str. MC2 155 Mpr protein YP_885627.1 1306698 R 246196 CDS YP_885628.1 118468287 4535774 1307514..1307831 1 NC_008596.1 hypothetical protein 1307831 4535774 MSMEG_1237 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885628.1 1307514 D 246196 CDS YP_885629.1 118468638 4533570 1308315..1310015 1 NC_008596.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; type III restriction enzyme, res subunit 1310015 4533570 MSMEG_1238 Mycobacterium smegmatis str. MC2 155 type III restriction enzyme, res subunit YP_885629.1 1308315 D 246196 CDS YP_885630.1 118467929 4533408 complement(1310225..1311592) 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; ISMsm4, transposase 1311592 4533408 MSMEG_1239 Mycobacterium smegmatis str. MC2 155 ISMsm4, transposase YP_885630.1 1310225 R 246196 CDS YP_885631.1 118473491 4532124 1311730..1313316 1 NC_008596.1 hypothetical protein 1313316 4532124 MSMEG_1240 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885631.1 1311730 D 246196 CDS YP_885632.1 118472717 4531686 1313313..1314251 1 NC_008596.1 hypothetical protein 1314251 4531686 MSMEG_1241 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885632.1 1313313 D 246196 CDS YP_885633.1 118471674 4536475 1314552..1315712 1 NC_008596.1 identified by match to protein family HMM PF00266; cysteine desulfurase IscS 1315712 iscS 4536475 iscS Mycobacterium smegmatis str. MC2 155 cysteine desulfurase IscS YP_885633.1 1314552 D 246196 CDS YP_885634.1 118471687 4536449 1315709..1316782 1 NC_008596.1 hypothetical protein 1316782 4536449 MSMEG_1243 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885634.1 1315709 D 246196 CDS YP_885635.1 118470740 4533291 1316779..1320237 1 NC_008596.1 hypothetical protein 1320237 4533291 MSMEG_1244 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885635.1 1316779 D 246196 CDS YP_885636.1 118469772 4532836 1320230..1321078 1 NC_008596.1 identified by match to protein family HMM PF01507; phosphoadenosine phosphosulfate reductase 1321078 4532836 MSMEG_1245 Mycobacterium smegmatis str. MC2 155 phosphoadenosine phosphosulfate reductase YP_885636.1 1320230 D 246196 CDS YP_885637.1 118468835 4535412 1321231..1322667 1 NC_008596.1 hypothetical protein 1322667 4535412 MSMEG_1246 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885637.1 1321231 D 246196 CDS YP_885638.1 118467445 4535454 1323156..1323980 1 NC_008596.1 hypothetical protein 1323980 4535454 MSMEG_1247 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885638.1 1323156 D 246196 CDS YP_885639.1 118473377 4536622 1324238..1324906 1 NC_008596.1 hypothetical protein 1324906 4536622 MSMEG_1248 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885639.1 1324238 D 246196 CDS YP_885640.1 118473912 4536978 complement(1325180..1326046) 1 NC_008596.1 identified by similarity to GP:12484144; match to protein family HMM PF00665; ISMsm7, transposase orfB 1326046 4536978 MSMEG_1249 Mycobacterium smegmatis str. MC2 155 ISMsm7, transposase orfB YP_885640.1 1325180 R 246196 CDS YP_885641.1 118473170 4532572 complement(1326043..1326339) 1 NC_008596.1 identified by similarity to GP:6572439; match to protein family HMM PF01527; ISMsm7, transposase orfA 1326339 4532572 MSMEG_1250 Mycobacterium smegmatis str. MC2 155 ISMsm7, transposase orfA YP_885641.1 1326043 R 246196 CDS YP_885642.1 118471997 4536144 1326988..1327353 1 NC_008596.1 identified by match to protein family HMM PF05305; hypothetical protein 1327353 4536144 MSMEG_1251 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885642.1 1326988 D 246196 CDS YP_885643.1 118471375 4535282 1327732..1333908 1 NC_008596.1 hypothetical protein 1333908 4535282 MSMEG_1252 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885643.1 1327732 D 246196 CDS YP_885644.1 118468709 4534699 1334462..1337860 1 NC_008596.1 hypothetical protein 1337860 4534699 MSMEG_1253 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885644.1 1334462 D 246196 CDS YP_885645.1 118469828 4532854 1337844..1342847 1 NC_008596.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; DEAD/DEAH box helicase 1342847 4532854 MSMEG_1254 Mycobacterium smegmatis str. MC2 155 DEAD/DEAH box helicase YP_885645.1 1337844 D 246196 CDS YP_885646.1 118470029 4531644 1343125..1345338 1 NC_008596.1 identified by match to protein family HMM PF00580; UvrD/REP helicase 1345338 4531644 MSMEG_1255 Mycobacterium smegmatis str. MC2 155 UvrD/REP helicase YP_885646.1 1343125 D 246196 CDS YP_885647.1 118472490 4532441 1345348..1345767 1 NC_008596.1 hypothetical protein 1345767 4532441 MSMEG_1256 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885647.1 1345348 D 246196 CDS YP_885648.1 118468619 4535017 1346160..1346861 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 1346861 4535017 MSMEG_1257 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_885648.1 1346160 D 246196 CDS YP_885649.1 118471955 4536179 complement(1346869..1348191) 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 1348191 4536179 MSMEG_1258 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_885649.1 1346869 R 246196 CDS YP_885650.1 118472144 4532481 1347910..1348326 1 NC_008596.1 hypothetical protein 1348326 4532481 MSMEG_1259 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885650.1 1347910 D 246196 CDS YP_885651.1 118470506 4537559 complement(1348648..1350015) 1 NC_008596.1 hypothetical protein 1350015 4537559 MSMEG_1260 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885651.1 1348648 R 246196 CDS YP_885652.1 118469558 4537504 1350265..1351347 1 NC_008596.1 hypothetical protein 1351347 4537504 MSMEG_1261 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885652.1 1350265 D 246196 CDS YP_885653.1 118468160 4535032 1351351..1351716 1 NC_008596.1 hypothetical protein 1351716 4535032 MSMEG_1262 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885653.1 1351351 D 246196 CDS YP_885654.1 118469495 4533321 complement(1352309..1352833) 1 NC_008596.1 hypothetical protein 1352833 4533321 MSMEG_1263 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885654.1 1352309 R 246196 CDS YP_885655.1 118468833 4535410 1353580..1353978 1 NC_008596.1 identified by match to protein family HMM PF07553; prophage Lp1 protein 5 1353978 4535410 MSMEG_1264 Mycobacterium smegmatis str. MC2 155 prophage Lp1 protein 5 YP_885655.1 1353580 D 246196 CDS YP_885656.1 118472508 4533738 complement(1354095..1355633) 1 NC_008596.1 hypothetical protein 1355633 4533738 MSMEG_1265 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885656.1 1354095 R 246196 CDS YP_885657.1 118469829 4532855 complement(1355685..1356374) 1 NC_008596.1 ankyrin 1356374 4532855 MSMEG_1266 Mycobacterium smegmatis str. MC2 155 ankyrin YP_885657.1 1355685 R 246196 CDS YP_885658.1 118472787 4533130 1357886..1358554 1 NC_008596.1 identified by match to protein family HMM PF00293; nudix hydrolase 1358554 4533130 MSMEG_1268 Mycobacterium smegmatis str. MC2 155 nudix hydrolase YP_885658.1 1357886 D 246196 CDS YP_885659.1 118473263 4537693 complement(1358568..1359566) 1 NC_008596.1 identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase 1359566 4537693 MSMEG_1269 Mycobacterium smegmatis str. MC2 155 Ser/Thr protein phosphatase YP_885659.1 1358568 R 246196 CDS YP_885660.1 118470843 4534298 complement(1359598..1359891) 1 NC_008596.1 hypothetical protein 1359891 4534298 MSMEG_1270 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885660.1 1359598 R 246196 CDS YP_885661.1 118472361 4531612 complement(1360010..1360372) 1 NC_008596.1 hypothetical protein 1360372 4531612 MSMEG_1271 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885661.1 1360010 R 246196 CDS YP_885662.1 118469894 4533213 complement(1360369..1361847) 1 NC_008596.1 identified by match to protein family HMM PF00782; match to protein family HMM PF03747; ribosylglycohydrolase 1361847 4533213 MSMEG_1272 Mycobacterium smegmatis str. MC2 155 ribosylglycohydrolase YP_885662.1 1360369 R 246196 CDS YP_885663.1 118469526 4536730 complement(1362036..1362377) 1 NC_008596.1 identified by match to protein family HMM PF05305; hypothetical protein 1362377 4536730 MSMEG_1273 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885663.1 1362036 R 246196 CDS YP_885664.1 118473824 4531634 complement(1362437..1363564) 1 NC_008596.1 identified by match to protein family HMM PF03758; gluconolactonase 1363564 4531634 MSMEG_1274 Mycobacterium smegmatis str. MC2 155 gluconolactonase YP_885664.1 1362437 R 246196 CDS YP_885665.1 118472349 4531600 complement(1363745..1364824) 1 NC_008596.1 HNH nuclease 1364824 4531600 MSMEG_1275 Mycobacterium smegmatis str. MC2 155 HNH nuclease YP_885665.1 1363745 R 246196 CDS YP_885666.1 118470747 4533299 1364892..1365188 1 NC_008596.1 hypothetical protein 1365188 4533299 MSMEG_1276 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885666.1 1364892 D 246196 CDS YP_885667.1 118471644 4536481 1365336..1365533 1 NC_008596.1 hypothetical protein 1365533 4536481 MSMEG_1277 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885667.1 1365336 D 246196 CDS YP_885668.1 118470086 4532961 1365530..1365922 1 NC_008596.1 identified by match to protein family HMM PF05012; match to protein family HMM TIGR01550; death-on-curing protein 1365922 4532961 MSMEG_1278 Mycobacterium smegmatis str. MC2 155 death-on-curing protein YP_885668.1 1365530 D 246196 CDS YP_885669.1 118469044 4536858 1365999..1367429 1 NC_008596.1 hypothetical protein 1367429 4536858 MSMEG_1279 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885669.1 1365999 D 246196 CDS YP_885670.1 118472384 4531794 1367426..1368148 1 NC_008596.1 hypothetical protein 1368148 4531794 MSMEG_1280 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885670.1 1367426 D 246196 CDS YP_885671.1 118469553 4537499 1368135..1371380 1 NC_008596.1 hypothetical protein 1371380 4537499 MSMEG_1281 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885671.1 1368135 D 246196 CDS YP_885672.1 118468056 4534171 1371377..1372546 1 NC_008596.1 hypothetical protein 1372546 4534171 MSMEG_1282 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885672.1 1371377 D 246196 CDS YP_885673.1 118468950 4532613 1372567..1372821 1 NC_008596.1 identified by match to protein family HMM PF07704; ribbon-helix-helix transcription factor, family protein 1372821 4532613 MSMEG_1283 Mycobacterium smegmatis str. MC2 155 ribbon-helix-helix transcription factor, family protein YP_885673.1 1372567 D 246196 CDS YP_885674.1 118472447 4533588 1372821..1373210 1 NC_008596.1 identified by match to protein family HMM PF01850; twitching motility protein PilT 1373210 4533588 MSMEG_1284 Mycobacterium smegmatis str. MC2 155 twitching motility protein PilT YP_885674.1 1372821 D 246196 CDS YP_885675.1 118473383 4536628 complement(1373229..1375634) 1 NC_008596.1 identified by match to protein family HMM PF02810; match to protein family HMM PF07721; hypothetical protein 1375634 4536628 MSMEG_1285 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885675.1 1373229 R 246196 CDS YP_885676.1 118469124 4535337 complement(1375656..1377416) 1 NC_008596.1 identified by match to protein family HMM PF00884; sulfatase 1377416 4535337 MSMEG_1286 Mycobacterium smegmatis str. MC2 155 sulfatase YP_885676.1 1375656 R 246196 CDS YP_885677.1 118469635 4534096 complement(1377413..1377850) 1 NC_008596.1 similar to Streptomyces cyclase/dehydrase; identified by match to protein family HMM PF03364; cyclase/dehydrase 1377850 4534096 MSMEG_1287 Mycobacterium smegmatis str. MC2 155 cyclase/dehydrase YP_885677.1 1377413 R 246196 CDS YP_885678.1 118470437 4532228 1378017..1379666 1 NC_008596.1 hypothetical protein 1379666 4532228 MSMEG_1288 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885678.1 1378017 D 246196 CDS YP_885679.1 118467966 4535148 complement(1379677..1380480) 1 NC_008596.1 hypothetical protein 1380480 4535148 MSMEG_1289 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885679.1 1379677 R 246196 CDS YP_885680.1 118472170 4535696 1380557..1382425 1 NC_008596.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1382425 ilvD 4535696 ilvD Mycobacterium smegmatis str. MC2 155 dihydroxy-acid dehydratase YP_885680.1 1380557 D 246196 CDS YP_885681.1 118470305 4533363 complement(1382428..1385109) 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF01315; match to protein family HMM PF01799; match to protein family HMM PF02738; oxidoreductase 1385109 4533363 MSMEG_1291 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_885681.1 1382428 R 246196 CDS YP_885682.1 118472666 4535086 complement(1385106..1385990) 1 NC_008596.1 identified by match to protein family HMM PF00941; FAD binding domain-containing protein 1385990 4535086 MSMEG_1292 Mycobacterium smegmatis str. MC2 155 FAD binding domain-containing protein YP_885682.1 1385106 R 246196 CDS YP_885683.1 118471205 4533807 1386036..1387940 1 NC_008596.1 identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; xanthine/uracil permeases family protein 1387940 4533807 MSMEG_1293 Mycobacterium smegmatis str. MC2 155 xanthine/uracil permeases family protein YP_885683.1 1386036 D 246196 CDS YP_885684.1 118469182 4534289 1387942..1388448 1 NC_008596.1 OHCU decarboxylase 1388448 4534289 MSMEG_1294 Mycobacterium smegmatis str. MC2 155 OHCU decarboxylase YP_885684.1 1387942 D 246196 CDS YP_885685.1 118468946 4532609 1388445..1388762 1 NC_008596.1 identified by match to protein family HMM PF00576; transthyretin 1388762 4532609 MSMEG_1295 Mycobacterium smegmatis str. MC2 155 transthyretin YP_885685.1 1388445 D 246196 CDS YP_885686.1 118473957 4533903 1388764..1389663 1 NC_008596.1 identified by match to protein family HMM PF01014; uricase 1389663 4533903 MSMEG_1296 Mycobacterium smegmatis str. MC2 155 uricase YP_885686.1 1388764 D 246196 CDS YP_885687.1 118467901 4531257 1389680..1391038 1 NC_008596.1 catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase 1391038 4531257 MSMEG_1297 Mycobacterium smegmatis str. MC2 155 hydroxydechloroatrazine ethylaminohydrolase YP_885687.1 1389680 D 246196 CDS YP_885688.1 118472759 4531948 1391035..1392369 1 NC_008596.1 identified by match to protein family HMM PF01979; match to protein family HMM PF07969; guanine deaminase 1392369 4531948 MSMEG_1298 Mycobacterium smegmatis str. MC2 155 guanine deaminase YP_885688.1 1391035 D 246196 CDS YP_885689.1 118470389 4533450 1392514..1393572 1 NC_008596.1 identified by match to protein family HMM PF03171; oxidoreductase, 2OG-Fe(II) oxygenase 1393572 4533450 MSMEG_1299 Mycobacterium smegmatis str. MC2 155 oxidoreductase, 2OG-Fe(II) oxygenase YP_885689.1 1392514 D 246196 CDS YP_885690.1 118468801 4535319 1393703..1394095 1 NC_008596.1 hypothetical protein 1394095 4535319 MSMEG_1300 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885690.1 1393703 D 246196 CDS YP_885691.1 118467754 4535654 1394284..1394544 1 NC_008596.1 identified by match to protein family HMM PF00196; hypothetical protein 1394544 4535654 MSMEG_1301 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885691.1 1394284 D 246196 CDS YP_885692.1 118469823 4532849 1394787..1394954 1 NC_008596.1 alkylphosphonate uptake protein 1394954 4532849 MSMEG_1302 Mycobacterium smegmatis str. MC2 155 alkylphosphonate uptake protein YP_885692.1 1394787 D 246196 CDS YP_885693.1 118468667 4535243 complement(1395326..1396144) 1 NC_008596.1 identified by match to protein family HMM PF01381; transcriptional regulator 1396144 4535243 MSMEG_1303 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_885693.1 1395326 R 246196 CDS YP_885694.1 118473950 4533896 1396275..1397318 1 NC_008596.1 identified by match to protein family HMM PF00248; rhizopine catabolism protein 1397318 4533896 MSMEG_1304 Mycobacterium smegmatis str. MC2 155 rhizopine catabolism protein YP_885694.1 1396275 D 246196 CDS YP_885695.1 118472598 4536876 complement(1397328..1397936) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1397936 4536876 MSMEG_1305 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885695.1 1397328 R 246196 CDS YP_885696.1 118468721 4532791 complement(1398000..1399523) 1 NC_008596.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 1399523 4532791 MSMEG_1306 Mycobacterium smegmatis str. MC2 155 aldehyde dehydrogenase YP_885696.1 1398000 R 246196 CDS YP_885697.1 118470679 4531742 complement(1399532..1399834) 1 NC_008596.1 identified by match to protein family HMM PF07110; match to protein family HMM TIGR02118; EthD protein 1399834 4531742 MSMEG_1307 Mycobacterium smegmatis str. MC2 155 EthD protein YP_885697.1 1399532 R 246196 CDS YP_885698.1 118472874 4531358 complement(1399868..1401571) 1 NC_008596.1 identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976; peptidase S15 1401571 4531358 MSMEG_1308 Mycobacterium smegmatis str. MC2 155 peptidase S15 YP_885698.1 1399868 R 246196 CDS YP_885699.1 118468573 4533709 1402155..1402271 1 NC_008596.1 hypothetical protein 1402271 4533709 MSMEG_1309 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885699.1 1402155 D 246196 CDS YP_885700.1 118467553 4535507 1402450..1403853 1 NC_008596.1 identified by match to protein family HMM PF01609; TnpC protein 1403853 4535507 MSMEG_1310 Mycobacterium smegmatis str. MC2 155 TnpC protein YP_885700.1 1402450 D 246196 CDS YP_885701.1 118470017 4532755 complement(1404005..1405996) 1 NC_008596.1 identified by match to protein family HMM PF03169; match to protein family HMM TIGR00728; match to protein family HMM TIGR00733; oligopeptide transporter OPT family protein 1405996 4532755 MSMEG_1311 Mycobacterium smegmatis str. MC2 155 oligopeptide transporter OPT family protein YP_885701.1 1404005 R 246196 CDS YP_885702.1 118469087 4537643 1406153..1406749 1 NC_008596.1 hypothetical protein 1406749 4537643 MSMEG_1312 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885702.1 1406153 D 246196 CDS YP_885703.1 118468052 4534166 1406859..1409201 1 NC_008596.1 hypothetical protein 1409201 4534166 MSMEG_1313 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885703.1 1406859 D 246196 CDS YP_885704.1 118470719 4533934 1409246..1410160 1 NC_008596.1 identified by match to protein family HMM PF00924; transporter small conductance mechanosensitive ion channel (MscS) family protein 1410160 4533934 MSMEG_1315 Mycobacterium smegmatis str. MC2 155 transporter small conductance mechanosensitive ion channel (MscS) family protein YP_885704.1 1409246 D 246196 CDS YP_885705.1 118468322 4533801 complement(1410157..1410906) 1 NC_008596.1 hypothetical protein 1410906 4533801 MSMEG_1314 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885705.1 1410157 R 246196 CDS YP_885706.1 118472609 4536887 complement(1411176..1412792) 1 NC_008596.1 identified by match to protein family HMM PF00009; match to protein family HMM TIGR00231; match to protein family HMM TIGR00503; peptide chain release factor 3 1412792 prfC 4536887 prfC Mycobacterium smegmatis str. MC2 155 peptide chain release factor 3 YP_885706.1 1411176 R 246196 CDS YP_885707.1 118469407 4531960 complement(1413062..1413751) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptional regulator 1413751 4531960 MSMEG_1317 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_885707.1 1413062 R 246196 CDS YP_885708.1 118473574 4531008 complement(1413803..1414714) 1 NC_008596.1 identified by match to protein family HMM PF01522; polysaccharide deacetylase 1414714 4531008 MSMEG_1318 Mycobacterium smegmatis str. MC2 155 polysaccharide deacetylase YP_885708.1 1413803 R 246196 CDS YP_885709.1 118472910 4533779 complement(1414728..1415882) 1 NC_008596.1 identified by match to protein family HMM PF01177; Asp/Glu racemase 1415882 4533779 MSMEG_1319 Mycobacterium smegmatis str. MC2 155 Asp/Glu racemase YP_885709.1 1414728 R 246196 CDS YP_885710.1 118473991 4531435 complement(1415879..1417180) 1 NC_008596.1 identified by match to protein family HMM PF07690; major facilitator superfamily protein 1417180 4531435 MSMEG_1320 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_885710.1 1415879 R 246196 CDS YP_885711.1 118470042 4534586 1417321..1417941 1 NC_008596.1 identified by match to protein family HMM PF01557; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 1417941 4534586 MSMEG_1321 Mycobacterium smegmatis str. MC2 155 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_885711.1 1417321 D 246196 CDS YP_885712.1 118471476 4531877 1418115..1419377 1 NC_008596.1 identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 1419377 4531877 MSMEG_1322 Mycobacterium smegmatis str. MC2 155 ErfK/YbiS/YcfS/YnhG family protein YP_885712.1 1418115 D 246196 CDS YP_885713.1 118473793 4531272 1419591..1419878 1 NC_008596.1 hypothetical protein 1419878 4531272 MSMEG_1323 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885713.1 1419591 D 246196 CDS YP_885714.1 118470240 4536759 complement(1419914..1420030) 1 NC_008596.1 hypothetical protein 1420030 4536759 MSMEG_1324 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885714.1 1419914 R 246196 CDS YP_885715.1 118473947 4533893 1420278..1420427 1 NC_008596.1 hypothetical protein 1420427 4533893 MSMEG_1326 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885715.1 1420278 D 246196 CDS YP_885716.1 118472888 4534031 complement(1420424..1422088) 1 NC_008596.1 identified by match to protein family HMM TIGR01447; exodeoxyribonuclease V subunit alpha 1422088 recD 4534031 recD Mycobacterium smegmatis str. MC2 155 exodeoxyribonuclease V subunit alpha YP_885716.1 1420424 R 246196 CDS YP_885717.1 118467867 4532889 complement(1422085..1425336) 1 NC_008596.1 identified by match to protein family HMM PF00580; match to protein family HMM TIGR00609; exodeoxyribonuclease V subunit beta 1425336 recB 4532889 recB Mycobacterium smegmatis str. MC2 155 exodeoxyribonuclease V subunit beta YP_885717.1 1422085 R 246196 CDS YP_885718.1 118471772 4536343 complement(1425333..1428596) 1 NC_008596.1 identified by match to protein family HMM PF04257; match to protein family HMM TIGR01450; exodeoxyribonuclease V subunit gamma 1428596 recC 4536343 recC Mycobacterium smegmatis str. MC2 155 exodeoxyribonuclease V subunit gamma YP_885718.1 1425333 R 246196 CDS YP_885719.1 118471085 4537528 complement(1428614..1429858) 1 NC_008596.1 identified by match to protein family HMM PF05977; match to protein family HMM PF07690; major facilitator superfamily protein 1429858 4537528 MSMEG_1329 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_885719.1 1428614 R 246196 CDS YP_885720.1 118470539 4532993 complement(1429855..1430313) 1 NC_008596.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1430313 4532993 MSMEG_1330 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_885720.1 1429855 R 246196 CDS YP_885721.1 118469238 4535374 complement(1430426..1431133) 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1431133 4535374 MSMEG_1331 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_885721.1 1430426 R 246196 CDS YP_885722.1 118471537 4537617 complement(1431151..1432008) 1 NC_008596.1 hypothetical protein 1432008 4537617 MSMEG_1332 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885722.1 1431151 R 246196 CDS YP_885723.1 118472242 4532463 complement(1432067..1433059) 1 NC_008596.1 hypothetical protein 1433059 4532463 MSMEG_1333 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885723.1 1432067 R 246196 CDS YP_885724.1 118470931 4533979 complement(1433302..1434039) 1 NC_008596.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase 1434039 4533979 MSMEG_1334 Mycobacterium smegmatis str. MC2 155 metallo-beta-lactamase YP_885724.1 1433302 R 246196 CDS YP_885725.1 118472493 4532444 1434167..1434628 1 NC_008596.1 identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; BadM/Rrf2 family transcriptional regulator 1434628 4532444 MSMEG_1335 Mycobacterium smegmatis str. MC2 155 BadM/Rrf2 family transcriptional regulator YP_885725.1 1434167 D 246196 CDS YP_885726.1 118473221 4531071 1434628..1435863 1 NC_008596.1 identified by similarity to SP:P39662; match to protein family HMM PF00042; match to protein family HMM PF00175; match to protein family HMM PF00970; flavohemoprotein 1435863 4531071 MSMEG_1336 Mycobacterium smegmatis str. MC2 155 flavohemoprotein YP_885726.1 1434628 D 246196 CDS YP_885727.1 118471282 4532176 1436204..1436371 1 NC_008596.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 1436371 rpmG 4532176 rpmG Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L33 YP_885727.1 1436204 D 246196 CDS YP_885728.1 118473876 4531124 1436382..1436858 1 NC_008596.1 functions as a heterodimer along with HadB in fatty acid biosynthesis; fatty acid synthase type II; FAS-II; (3R)-hydroxyacyl-ACP dehydratase subunit HadA 1436858 4531124 MSMEG_1340 Mycobacterium smegmatis str. MC2 155 (3R)-hydroxyacyl-ACP dehydratase subunit HadA YP_885728.1 1436382 D 246196 CDS YP_885729.1 118471980 4536166 1436845..1437273 1 NC_008596.1 functions as a heterodimer along with HadA or HadC in fatty acid biosynthesis; fatty acid synthase type II; FAS-II; (3R)-hydroxyacyl-ACP dehydratase subunit HadB 1437273 4536166 MSMEG_1341 Mycobacterium smegmatis str. MC2 155 (3R)-hydroxyacyl-ACP dehydratase subunit HadB YP_885729.1 1436845 D 246196 CDS YP_885730.1 118471308 4534648 1437283..1437792 1 NC_008596.1 functions as a heterodimer along with HadB in fatty acid biosynthesis; fatty acid synthase type II; FAS-II; (3R)-hydroxyacyl-ACP dehydratase subunit HadC 1437792 4534648 MSMEG_1342 Mycobacterium smegmatis str. MC2 155 (3R)-hydroxyacyl-ACP dehydratase subunit HadC YP_885730.1 1437283 D 246196 CDS YP_885731.1 118468481 4537670 1438122..1438556 1 NC_008596.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 1438556 secE 4537670 secE Mycobacterium smegmatis str. MC2 155 preprotein translocase subunit SecE YP_885731.1 1438122 D 246196 CDS YP_885732.1 118467542 4536004 1438583..1439425 1 NC_008596.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 1439425 nusG 4536004 nusG Mycobacterium smegmatis str. MC2 155 transcription antitermination protein NusG YP_885732.1 1438583 D 246196 CDS YP_885733.1 118473904 4536970 1439493..1439921 1 NC_008596.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 1439921 rplK 4536970 rplK Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L11 YP_885733.1 1439493 D 246196 CDS YP_885734.1 118473196 4533313 1439987..1440694 1 NC_008596.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1440694 rplA 4533313 rplA Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L1 YP_885734.1 1439987 D 246196 CDS YP_885735.1 118468155 4532698 complement(1440768..1441997) 1 NC_008596.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase ECF-subfamily protein sigma factor 1441997 4532698 MSMEG_1348 Mycobacterium smegmatis str. MC2 155 RNA polymerase ECF-subfamily protein sigma factor YP_885735.1 1440768 R 246196 CDS YP_885736.1 118468837 4535414 complement(1442005..1442700) 1 NC_008596.1 identified by match to protein family HMM PF04946; DGPF domain-containing protein 1442700 4535414 MSMEG_1349 Mycobacterium smegmatis str. MC2 155 DGPF domain-containing protein YP_885736.1 1442005 R 246196 CDS YP_885737.1 118468354 4533953 complement(1442825..1443685) 1 NC_008596.1 identified by match to protein family HMM PF02353; cyclopropane-fatty-acyl-phospholipid synthase 1443685 4533953 MSMEG_1350 Mycobacterium smegmatis str. MC2 155 cyclopropane-fatty-acyl-phospholipid synthase YP_885737.1 1442825 R 246196 CDS YP_885738.1 118473972 4533043 complement(1443878..1444750) 1 NC_008596.1 identified by match to protein family HMM PF02353; cyclopropane-fatty-acyl-phospholipid synthase 1444750 4533043 MSMEG_1351 Mycobacterium smegmatis str. MC2 155 cyclopropane-fatty-acyl-phospholipid synthase YP_885738.1 1443878 R 246196 CDS YP_885739.1 118469628 4534086 complement(1444930..1445847) 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 1445847 4534086 MSMEG_1352 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_885739.1 1444930 R 246196 CDS YP_885740.1 118471799 4536331 complement(1445847..1447268) 1 NC_008596.1 identified by match to protein family HMM PF03109; ABC transporter 1447268 4536331 MSMEG_1353 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_885740.1 1445847 R 246196 CDS YP_885741.1 118470454 4534517 1448423..1449022 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1449022 4534517 MSMEG_1355 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885741.1 1448423 D 246196 CDS YP_885742.1 118469661 4535423 complement(1449027..1449638) 1 NC_008596.1 identified by match to protein family HMM PF04978; hypothetical protein 1449638 4535423 MSMEG_1356 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885742.1 1449027 R 246196 CDS YP_885743.1 118468134 4535222 complement(1449643..1450170) 1 NC_008596.1 hypothetical protein 1450170 4535222 MSMEG_1357 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885743.1 1449643 R 246196 CDS YP_885744.1 118469865 4530903 1450233..1451195 1 NC_008596.1 identified by match to protein family HMM PF02082; match to protein family HMM PF08220; DeoR family transcriptional regulator 1451195 4530903 MSMEG_1359 Mycobacterium smegmatis str. MC2 155 DeoR family transcriptional regulator YP_885744.1 1450233 D 246196 CDS YP_885745.1 118470218 4533909 complement(1451188..1451748) 1 NC_008596.1 hypothetical protein 1451748 4533909 MSMEG_1358 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885745.1 1451188 R 246196 CDS YP_885746.1 118467365 4534050 1451809..1452558 1 NC_008596.1 identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase 1452558 4534050 MSMEG_1360 Mycobacterium smegmatis str. MC2 155 endonuclease/exonuclease/phosphatase YP_885746.1 1451809 D 246196 CDS YP_885747.1 118472620 4537270 1452576..1456718 1 NC_008596.1 identified by match to protein family HMM PF01074; match to protein family HMM PF07748; alpha-mannosidase 1456718 4537270 MSMEG_1361 Mycobacterium smegmatis str. MC2 155 alpha-mannosidase YP_885747.1 1452576 D 246196 CDS YP_885748.1 118473455 4534899 1456715..1457314 1 NC_008596.1 hypothetical protein 1457314 4534899 MSMEG_1362 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885748.1 1456715 D 246196 CDS YP_885749.1 118467471 4536988 1457319..1458224 1 NC_008596.1 identified by match to protein family HMM PF00480; glucokinase 1458224 4536988 MSMEG_1363 Mycobacterium smegmatis str. MC2 155 glucokinase YP_885749.1 1457319 D 246196 CDS YP_885750.1 118473128 4531189 1458668..1459195 1 NC_008596.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 1459195 rplJ 4531189 rplJ Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L10 YP_885750.1 1458668 D 246196 CDS YP_885751.1 118468616 4535014 1459265..1459657 1 NC_008596.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 1459657 rplL 4535014 rplL Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L7/L12 YP_885751.1 1459265 D 246196 CDS YP_885752.1 118470350 4534624 1459848..1460930 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1460930 4534624 MSMEG_1366 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_885752.1 1459848 D 246196 CDS YP_885753.1 118468129 4535217 1461630..1465139 1 NC_008596.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; subunit beta is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1465139 rpoB 4535217 rpoB Mycobacterium smegmatis str. MC2 155 DNA-directed RNA polymerase subunit beta YP_885753.1 1461630 D 246196 CDS YP_885754.1 118469768 4532832 1465203..1469156 1 NC_008596.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 1469156 rpoC 4532832 rpoC Mycobacterium smegmatis str. MC2 155 DNA-directed RNA polymerase subunit beta' YP_885754.1 1465203 D 246196 CDS YP_885755.1 118467575 4532865 complement(1469221..1470270) 1 NC_008596.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 1470270 4532865 MSMEG_1369 Mycobacterium smegmatis str. MC2 155 LacI family transcriptional regulator YP_885755.1 1469221 R 246196 CDS YP_885756.1 118469450 4534827 1470431..1471456 1 NC_008596.1 identified by match to protein family HMM PF00107; 2-deoxy-scyllo-inosamine dehydrogenase 1471456 4534827 MSMEG_1370 Mycobacterium smegmatis str. MC2 155 2-deoxy-scyllo-inosamine dehydrogenase YP_885756.1 1470431 D 246196 CDS YP_885757.1 118467887 4535262 1471453..1472454 1 NC_008596.1 hypothetical protein 1472454 4535262 MSMEG_1371 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885757.1 1471453 D 246196 CDS YP_885758.1 118472440 4532057 1472465..1473223 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1473223 4532057 MSMEG_1372 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_885758.1 1472465 D 246196 CDS YP_885759.1 118471109 4533467 1473220..1474338 1 NC_008596.1 identified by match to protein family HMM PF02653; ribose/xylose/arabinose/galactoside ABC-type transport systems, permeases 1474338 4533467 MSMEG_1373 Mycobacterium smegmatis str. MC2 155 ribose/xylose/arabinose/galactoside ABC-type transport systems, permeases YP_885759.1 1473220 D 246196 CDS YP_885760.1 118470426 4532217 1474328..1475374 1 NC_008596.1 identified by match to protein family HMM PF00532; ribose ABC transporter periplasmic binding protein 1475374 4532217 MSMEG_1374 Mycobacterium smegmatis str. MC2 155 ribose ABC transporter periplasmic binding protein YP_885760.1 1474328 D 246196 CDS YP_885761.1 118471801 4536333 complement(1475387..1476229) 1 NC_008596.1 identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; tagatose-1,6-bisphosphate aldolase GatY 1476229 4536333 MSMEG_1375 Mycobacterium smegmatis str. MC2 155 tagatose-1,6-bisphosphate aldolase GatY YP_885761.1 1475387 R 246196 CDS YP_885762.1 118471845 4536299 1476315..1477562 1 NC_008596.1 identified by match to protein family HMM PF00370; xylulose kinase 1477562 4536299 MSMEG_1376 Mycobacterium smegmatis str. MC2 155 xylulose kinase YP_885762.1 1476315 D 246196 CDS YP_885763.1 118468114 4535612 1477559..1478347 1 NC_008596.1 identified by match to protein family HMM PF00455; match to protein family HMM PF08220; DeoR family transcriptional regulator 1478347 4535612 MSMEG_1377 Mycobacterium smegmatis str. MC2 155 DeoR family transcriptional regulator YP_885763.1 1477559 D 246196 CDS YP_885764.1 118470352 4534626 1478344..1479261 1 NC_008596.1 identified by match to protein family HMM PF00294; 1-phosphofructokinase 1479261 4534626 MSMEG_1378 Mycobacterium smegmatis str. MC2 155 1-phosphofructokinase YP_885764.1 1478344 D 246196 CDS YP_885765.1 118473271 4537701 1479288..1480475 1 NC_008596.1 identified by similarity to SP:P37339; match to protein family HMM PF01266; hypothetical protein 1480475 4537701 MSMEG_1379 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885765.1 1479288 D 246196 CDS YP_885766.1 118470864 4536796 complement(1480902..1481606) 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 1481606 4536796 MSMEG_1380 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_885766.1 1480902 R 246196 CDS YP_885767.1 118468420 4534563 1481785..1482201 1 NC_008596.1 identified by match to protein family HMM PF05423; MmpS5 protein 1482201 4534563 MSMEG_1381 Mycobacterium smegmatis str. MC2 155 MmpS5 protein YP_885767.1 1481785 D 246196 CDS YP_885768.1 118472405 4531326 1482198..1485101 1 NC_008596.1 identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; MmpL5 protein 1485101 4531326 MSMEG_1382 Mycobacterium smegmatis str. MC2 155 MmpL5 protein YP_885768.1 1482198 D 246196 CDS YP_885769.1 118468437 4535595 1485148..1485900 1 NC_008596.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 1485900 4535595 MSMEG_1383 Mycobacterium smegmatis str. MC2 155 endonuclease IV YP_885769.1 1485148 D 246196 CDS YP_885770.1 118473982 4531426 1485994..1487205 1 NC_008596.1 identified by match to protein family HMM PF01569; PAP2 superfamily protein 1487205 4531426 MSMEG_1385 Mycobacterium smegmatis str. MC2 155 PAP2 superfamily protein YP_885770.1 1485994 D 246196 CDS YP_885771.1 118467409 4535831 complement(1487074..1487475) 1 NC_008596.1 identified by match to protein family HMM PF05899; hypothetical protein 1487475 4535831 MSMEG_1384 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885771.1 1487074 R 246196 CDS YP_885772.1 118468054 4534168 1487534..1488700 1 NC_008596.1 hypothetical protein 1488700 4534168 MSMEG_1386 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885772.1 1487534 D 246196 CDS YP_885773.1 118472712 4531680 1488754..1490409 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 1490409 4531680 MSMEG_1387 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_885773.1 1488754 D 246196 CDS YP_885774.1 118473962 4533033 1490456..1491394 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1491394 4533033 MSMEG_1388 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_885774.1 1490456 D 246196 CDS YP_885775.1 118468768 4535659 1491401..1492138 1 NC_008596.1 identified by match to protein family HMM PF07848; match to protein family HMM PF08223; hypothetical protein 1492138 4535659 MSMEG_1389 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885775.1 1491401 D 246196 CDS YP_885776.1 118468033 4531390 1492135..1492899 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1492899 4531390 MSMEG_1390 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_885776.1 1492135 D 246196 CDS YP_885777.1 118472322 4532910 complement(1492993..1493892) 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 1493892 4532910 MSMEG_1391 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_885777.1 1492993 R 246196 CDS YP_885778.1 118470966 4534538 1494011..1495168 1 NC_008596.1 identified by match to protein family HMM PF00465; alcohol dehydrogenase 1495168 4534538 MSMEG_1392 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_885778.1 1494011 D 246196 CDS YP_885779.1 118472451 4533592 complement(1495173..1495583) 1 NC_008596.1 hypothetical protein 1495583 4533592 MSMEG_1393 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885779.1 1495173 R 246196 CDS YP_885780.1 118472828 4537052 complement(1495614..1495991) 1 NC_008596.1 transmembrane protein 1495991 4537052 MSMEG_1394 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_885780.1 1495614 R 246196 CDS YP_885781.1 118468055 4534169 1496172..1496753 1 NC_008596.1 lipoprotein 1496753 4534169 MSMEG_1395 Mycobacterium smegmatis str. MC2 155 lipoprotein YP_885781.1 1496172 D 246196 CDS YP_885782.1 118468258 4533991 1496756..1497277 1 NC_008596.1 LprB protein 1497277 4533991 MSMEG_1396 Mycobacterium smegmatis str. MC2 155 LprB protein YP_885782.1 1496756 D 246196 CDS YP_885783.1 118469406 4531959 1497443..1498018 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1498018 4531959 MSMEG_1397 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885783.1 1497443 D 246196 CDS YP_885784.1 118471302 4534642 1498302..1498676 1 NC_008596.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 1498676 rpsL 4534642 rpsL Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S12 YP_885784.1 1498302 D 246196 CDS YP_885785.1 118472053 4535400 1498676..1499146 1 NC_008596.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 1499146 rpsG 4535400 rpsG Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S7 YP_885785.1 1498676 D 246196 CDS YP_885786.1 118471088 4537531 1501413..1502603 1 NC_008596.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1502603 tuf 4537531 tuf Mycobacterium smegmatis str. MC2 155 elongation factor Tu YP_885786.1 1501413 D 246196 CDS YP_885787.1 118468655 4535231 1502841..1503758 1 NC_008596.1 hypothetical protein 1503758 4535231 MSMEG_1402 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885787.1 1502841 D 246196 CDS YP_885788.1 118467776 4533407 1503848..1504765 1 NC_008596.1 identified by match to protein family HMM PF01083; cutinase 1504765 4533407 MSMEG_1403 Mycobacterium smegmatis str. MC2 155 cutinase YP_885788.1 1503848 D 246196 CDS YP_885789.1 118470625 4532983 1504930..1506252 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 1506252 4532983 MSMEG_1404 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_885789.1 1504930 D 246196 CDS YP_885790.1 118469624 4534082 complement(1506260..1506961) 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 1506961 4534082 MSMEG_1405 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_885790.1 1506260 R 246196 CDS YP_885791.1 118467727 4534010 1507065..1507916 1 NC_008596.1 hypothetical protein 1507916 4534010 MSMEG_1406 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885791.1 1507065 D 246196 CDS YP_885792.1 118468239 4537424 1510936..1512213 1 NC_008596.1 catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 1512213 arcA 4537424 arcA Mycobacterium smegmatis str. MC2 155 arginine deiminase YP_885792.1 1510936 D 246196 CDS YP_885793.1 118470687 4531750 1512243..1513094 1 NC_008596.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1513094 fabG 4531750 fabG Mycobacterium smegmatis str. MC2 155 3-ketoacyl-ACP reductase YP_885793.1 1512243 D 246196 CDS YP_885794.1 118471262 4531538 complement(1513135..1514016) 1 NC_008596.1 identified by match to protein family HMM PF00582; universal stress protein family protein 1514016 4531538 MSMEG_1411 Mycobacterium smegmatis str. MC2 155 universal stress protein family protein YP_885794.1 1513135 R 246196 CDS YP_885795.1 118473162 4532603 complement(1514075..1515580) 1 NC_008596.1 identified by match to protein family HMM PF00324; match to protein family HMM PF01490; amino acid permease 1515580 4532603 MSMEG_1412 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_885795.1 1514075 R 246196 CDS YP_885796.1 118468088 4536016 complement(1515608..1516876) 1 NC_008596.1 identified by match to protein family HMM PF00202; match to protein family HMM TIGR01885; ornithine--oxo-acid transaminase 1516876 rocD 4536016 rocD Mycobacterium smegmatis str. MC2 155 ornithine--oxo-acid transaminase YP_885796.1 1515608 R 246196 CDS YP_885797.1 118472203 4530861 complement(1516873..1517760) 1 NC_008596.1 identified by match to protein family HMM PF02274; amidinotransferase 1517760 4530861 MSMEG_1414 Mycobacterium smegmatis str. MC2 155 amidinotransferase YP_885797.1 1516873 R 246196 CDS YP_885798.1 118469975 4535749 1517874..1518320 1 NC_008596.1 identified by match to protein family HMM PF01037; AsnC family transcriptional regulator 1518320 4535749 MSMEG_1415 Mycobacterium smegmatis str. MC2 155 AsnC family transcriptional regulator YP_885798.1 1517874 D 246196 CDS YP_885799.1 118468368 4532917 1518390..1519577 1 NC_008596.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 1519577 4532917 MSMEG_1416 Mycobacterium smegmatis str. MC2 155 pyridine nucleotide-disulfide oxidoreductase YP_885799.1 1518390 D 246196 CDS YP_885800.1 118472958 4532296 complement(1519642..1520925) 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase 1520925 4532296 MSMEG_1417 Mycobacterium smegmatis str. MC2 155 glyoxalase YP_885800.1 1519642 R 246196 CDS YP_885801.1 118474018 4533431 complement(1520922..1521446) 1 NC_008596.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase ECF-type sigma factor 1521446 4533431 MSMEG_1418 Mycobacterium smegmatis str. MC2 155 RNA polymerase ECF-type sigma factor YP_885801.1 1520922 R 246196 CDS YP_885802.1 118467541 4536003 1521559..1522269 1 NC_008596.1 hypothetical protein 1522269 4536003 MSMEG_1419 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885802.1 1521559 D 246196 CDS YP_885803.1 118472856 4537452 complement(1522270..1522872) 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulatory protein 1522872 4537452 MSMEG_1420 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_885803.1 1522270 R 246196 CDS YP_885804.1 118473061 4534613 1522905..1523063 1 NC_008596.1 hypothetical protein 1523063 4534613 MSMEG_1421 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885804.1 1522905 D 246196 CDS YP_885805.1 118471463 4534382 1523066..1523374 1 NC_008596.1 hypothetical protein 1523374 4534382 MSMEG_1422 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885805.1 1523066 D 246196 CDS YP_885806.1 118470885 4537190 1523371..1524549 1 NC_008596.1 identified by match to protein family HMM PF04055; radical SAM domain-containing protein 1524549 4537190 MSMEG_1423 Mycobacterium smegmatis str. MC2 155 radical SAM domain-containing protein YP_885806.1 1523371 D 246196 CDS YP_885807.1 118469884 4536576 1524546..1525745 1 NC_008596.1 identified by match to protein family HMM PF01070; FMN-dependent dehydrogenase 1525745 4536576 MSMEG_1424 Mycobacterium smegmatis str. MC2 155 FMN-dependent dehydrogenase YP_885807.1 1524546 D 246196 CDS YP_885808.1 118468439 4535597 1525942..1526610 1 NC_008596.1 identified by match to protein family HMM PF02633; creatininase subfamily protein 1526610 4535597 MSMEG_1425 Mycobacterium smegmatis str. MC2 155 creatininase subfamily protein YP_885808.1 1525942 D 246196 CDS YP_885809.1 118469916 4535570 1526607..1528019 1 NC_008596.1 identified by match to protein family HMM PF00535; membrane sugar transferase 1528019 4535570 MSMEG_1426 Mycobacterium smegmatis str. MC2 155 membrane sugar transferase YP_885809.1 1526607 D 246196 CDS YP_885810.1 118473127 4531188 1528038..1529444 1 NC_008596.1 identified by match to protein family HMM PF00732; match to protein family HMM PF05199; glucose-methanol-choline oxidoreductase 1529444 4531188 MSMEG_1428 Mycobacterium smegmatis str. MC2 155 glucose-methanol-choline oxidoreductase YP_885810.1 1528038 D 246196 CDS YP_885811.1 118473596 4534870 complement(1529431..1531005) 1 NC_008596.1 identified by match to protein family HMM PF07690; transmembrane efflux protein 1531005 4534870 MSMEG_1427 Mycobacterium smegmatis str. MC2 155 transmembrane efflux protein YP_885811.1 1529431 R 246196 CDS YP_885812.1 118467669 4536935 1531094..1531729 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1531729 4536935 MSMEG_1430 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885812.1 1531094 D 246196 CDS YP_885813.1 118472520 4534718 complement(1531695..1532945) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450-terp 1532945 4534718 MSMEG_1429 Mycobacterium smegmatis str. MC2 155 cytochrome P450-terp YP_885813.1 1531695 R 246196 CDS YP_885814.1 118468495 4537684 complement(1533049..1534344) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450-terp 1534344 4537684 MSMEG_1431 Mycobacterium smegmatis str. MC2 155 cytochrome P450-terp YP_885814.1 1533049 R 246196 CDS YP_885815.1 118472936 4531225 1534440..1536026 1 NC_008596.1 identified by match to protein family HMM PF00135; acetylcholinesterase 1536026 4531225 MSMEG_1432 Mycobacterium smegmatis str. MC2 155 acetylcholinesterase YP_885815.1 1534440 D 246196 CDS YP_885816.1 118470739 4533290 1536028..1536393 1 NC_008596.1 hypothetical protein 1536393 4533290 MSMEG_1434 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885816.1 1536028 D 246196 CDS YP_885817.1 118467843 4535470 complement(1536329..1537144) 1 NC_008596.1 thioesterase 1537144 4535470 MSMEG_1433 Mycobacterium smegmatis str. MC2 155 thioesterase YP_885817.1 1536329 R 246196 CDS YP_885818.1 118473457 4534901 1537276..1537581 1 NC_008596.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1537581 rpsJ 4534901 rpsJ Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S10 YP_885818.1 1537276 D 246196 CDS YP_885819.1 118473190 4533307 1537596..1538249 1 NC_008596.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1538249 rplC 4533307 rplC Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L3 YP_885819.1 1537596 D 246196 CDS YP_885820.1 118470088 4532963 1538249..1538896 1 NC_008596.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1538896 rplD 4532963 rplD Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L4 YP_885820.1 1538249 D 246196 CDS YP_885821.1 118468304 4533062 1538896..1539198 1 NC_008596.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1539198 rplW 4533062 rplW Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L23 YP_885821.1 1538896 D 246196 CDS YP_885822.1 118472263 4531572 1539223..1540059 1 NC_008596.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1540059 rplB 4531572 rplB Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L2 YP_885822.1 1539223 D 246196 CDS YP_885823.1 118471461 4534380 1540081..1540362 1 NC_008596.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1540362 rpsS 4534380 rpsS Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S19 YP_885823.1 1540081 D 246196 CDS YP_885824.1 118469115 4535328 1540359..1540820 1 NC_008596.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1540820 rplV 4535328 rplV Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L22 YP_885824.1 1540359 D 246196 CDS YP_885825.1 118473160 4532601 1540820..1541647 1 NC_008596.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1541647 rpsC 4532601 rpsC Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S3 YP_885825.1 1540820 D 246196 CDS YP_885826.1 118472062 4536702 1541650..1542066 1 NC_008596.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1542066 rplP 4536702 rplP Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L16 YP_885826.1 1541650 D 246196 CDS YP_885827.1 118471307 4534647 1542066..1542299 1 NC_008596.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 1542299 rpmC 4534647 rpmC Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L29 YP_885827.1 1542066 D 246196 CDS YP_885828.1 118470178 4530813 1542299..1542595 1 NC_008596.1 identified by match to protein family HMM PF00366; 30S ribosomal protein S17 1542595 4530813 MSMEG_1445 Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S17 YP_885828.1 1542299 D 246196 CDS YP_885829.1 118469465 4535728 1542699..1543220 1 NC_008596.1 identified by match to protein family HMM PF00293; NTP pyrophosphohydrolase 1543220 4535728 MSMEG_1446 Mycobacterium smegmatis str. MC2 155 NTP pyrophosphohydrolase YP_885829.1 1542699 D 246196 CDS YP_885830.1 118472823 4537047 complement(1543239..1543640) 1 NC_008596.1 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 1543640 4537047 MSMEG_1447 Mycobacterium smegmatis str. MC2 155 MerR family transcriptional regulator YP_885830.1 1543239 R 246196 CDS YP_885831.1 118467744 4535643 complement(1543640..1545139) 1 NC_008596.1 identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740; integral membrane transporter 1545139 4535643 MSMEG_1448 Mycobacterium smegmatis str. MC2 155 integral membrane transporter YP_885831.1 1543640 R 246196 CDS YP_885832.1 118471534 4537614 1546037..1546177 1 NC_008596.1 hypothetical protein 1546177 4537614 MSMEG_1450 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885832.1 1546037 D 246196 CDS YP_885833.1 118472947 4531764 1546230..1548581 1 NC_008596.1 identified by match to protein family HMM PF00884; arylsulfatase 1548581 4531764 MSMEG_1451 Mycobacterium smegmatis str. MC2 155 arylsulfatase YP_885833.1 1546230 D 246196 CDS YP_885834.1 118473016 4532337 1548624..1549514 1 NC_008596.1 identified by match to protein family HMM PF03781; sulfatase-modifying factor 1 1549514 4532337 MSMEG_1452 Mycobacterium smegmatis str. MC2 155 sulfatase-modifying factor 1 YP_885834.1 1548624 D 246196 CDS YP_885835.1 118469200 4535789 complement(1549538..1551166) 1 NC_008596.1 identified by match to protein family HMM PF03600; citrate transporter 1551166 4535789 MSMEG_1453 Mycobacterium smegmatis str. MC2 155 citrate transporter YP_885835.1 1549538 R 246196 CDS YP_885836.1 118467376 4533847 1551217..1551333 1 NC_008596.1 hypothetical protein 1551333 4533847 MSMEG_1454 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885836.1 1551217 D 246196 CDS YP_885837.1 118473750 4537356 1551538..1552914 1 NC_008596.1 identified by match to protein family HMM PF07690; multidrug resistance protein 1552914 4537356 MSMEG_1455 Mycobacterium smegmatis str. MC2 155 multidrug resistance protein YP_885837.1 1551538 D 246196 CDS YP_885838.1 118472834 4537058 complement(1552915..1554600) 1 NC_008596.1 hypothetical protein 1554600 4537058 MSMEG_1456 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885838.1 1552915 R 246196 CDS YP_885839.1 118472488 4532439 1554800..1555246 1 NC_008596.1 identified by match to protein family HMM PF03928; hypothetical protein 1555246 4532439 MSMEG_1457 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885839.1 1554800 D 246196 CDS YP_885840.1 118468433 4535591 1555365..1556084 1 NC_008596.1 identified by match to protein family HMM PF03070; tena/thi-4 family protein 1556084 4535591 MSMEG_1458 Mycobacterium smegmatis str. MC2 155 tena/thi-4 family protein YP_885840.1 1555365 D 246196 CDS YP_885841.1 118471217 4533820 1556130..1556480 1 NC_008596.1 identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein 1556480 4533820 MSMEG_1459 Mycobacterium smegmatis str. MC2 155 Rieske (2Fe-2S) domain-containing protein YP_885841.1 1556130 D 246196 CDS YP_885842.1 118471102 4535867 1556477..1557703 1 NC_008596.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 1557703 4535867 MSMEG_1460 Mycobacterium smegmatis str. MC2 155 pyridine nucleotide-disulfide oxidoreductase YP_885842.1 1556477 D 246196 CDS YP_885843.1 118473915 4536981 1557700..1559142 1 NC_008596.1 identified by match to protein family HMM PF00171; 5-oxovalerate dehydrogenase 1559142 4536981 MSMEG_1461 Mycobacterium smegmatis str. MC2 155 5-oxovalerate dehydrogenase YP_885843.1 1557700 D 246196 CDS YP_885844.1 118468262 4533995 1559157..1559510 1 NC_008596.1 identified by match to protein family HMM PF00355; ferredoxin 1559510 4533995 MSMEG_1462 Mycobacterium smegmatis str. MC2 155 ferredoxin YP_885844.1 1559157 D 246196 CDS YP_885845.1 118473999 4530959 1559507..1561111 1 NC_008596.1 identified by match to protein family HMM PF01019; gamma-glutamyltranspeptidase 1561111 4530959 MSMEG_1463 Mycobacterium smegmatis str. MC2 155 gamma-glutamyltranspeptidase YP_885845.1 1559507 D 246196 CDS YP_885846.1 118468290 4533048 1561101..1561595 1 NC_008596.1 identified by match to protein family HMM PF01042; translation initiation inhibitor 1561595 4533048 MSMEG_1464 Mycobacterium smegmatis str. MC2 155 translation initiation inhibitor YP_885846.1 1561101 D 246196 CDS YP_885847.1 118470225 4533916 1561939..1562307 1 NC_008596.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1562307 rplN 4533916 rplN Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L14 YP_885847.1 1561939 D 246196 CDS YP_885848.1 118470956 4534528 1562308..1562625 1 NC_008596.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1562625 rplX 4534528 rplX Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L24 YP_885848.1 1562308 D 246196 CDS YP_885849.1 118472900 4533769 1562625..1563188 1 NC_008596.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1563188 rplE 4533769 rplE Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L5 YP_885849.1 1562625 D 246196 CDS YP_885850.1 118468358 4533957 1563192..1563377 1 NC_008596.1 identified by match to protein family HMM PF00253; 30S ribosomal protein S14 1563377 rpsN 4533957 rpsN Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S14 YP_885850.1 1563192 D 246196 CDS YP_885851.1 118473240 4536927 1563476..1563874 1 NC_008596.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1563874 rpsH 4536927 rpsH Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S8 YP_885851.1 1563476 D 246196 CDS YP_885852.1 118471041 4536743 1563889..1564428 1 NC_008596.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1564428 rplF 4536743 rplF Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L6 YP_885852.1 1563889 D 246196 CDS YP_885853.1 118471867 4536282 1564456..1564839 1 NC_008596.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1564839 rplR 4536282 rplR Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L18 YP_885853.1 1564456 D 246196 CDS YP_885854.1 118469641 4535051 1564865..1565509 1 NC_008596.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1565509 rpsE 4535051 rpsE Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S5 YP_885854.1 1564865 D 246196 CDS YP_885855.1 118473233 4536920 1565512..1565697 1 NC_008596.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 1565697 rpmD 4536920 rpmD Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L30 YP_885855.1 1565512 D 246196 CDS YP_885856.1 118470728 4533943 1565694..1566137 1 NC_008596.1 late assembly protein; 50S ribosomal protein L15 1566137 rplO 4533943 rplO Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L15 YP_885856.1 1565694 D 246196 CDS YP_885857.1 118469415 4531968 complement(1566207..1567187) 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 1567187 4531968 MSMEG_1475 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885857.1 1566207 R 246196 CDS YP_885858.1 118467630 4534204 1567306..1569090 1 NC_008596.1 identified by match to protein family HMM PF01343; match to protein family HMM TIGR00705; match to protein family HMM TIGR00706; signal peptide peptidase SppA, 67K type 1569090 sppA 4534204 sppA Mycobacterium smegmatis str. MC2 155 signal peptide peptidase SppA, 67K type YP_885858.1 1567306 D 246196 CDS YP_885859.1 118468974 4533538 1569316..1570743 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily protein 1570743 4533538 MSMEG_1477 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_885859.1 1569316 D 246196 CDS YP_885860.1 118473787 4535145 1570776..1571426 1 NC_008596.1 identified by match to protein family HMM PF01810; transporter LysE family protein 1571426 4535145 MSMEG_1478 Mycobacterium smegmatis str. MC2 155 transporter LysE family protein YP_885860.1 1570776 D 246196 CDS YP_885861.1 118470302 4533360 complement(1571431..1572342) 1 NC_008596.1 identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase, , family protein 1572342 4533360 MSMEG_1479 Mycobacterium smegmatis str. MC2 155 methyltransferase, , family protein YP_885861.1 1571431 R 246196 CDS YP_885862.1 118469362 4535876 complement(1572351..1573247) 1 NC_008596.1 identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase 1573247 4535876 MSMEG_1480 Mycobacterium smegmatis str. MC2 155 methyltransferase YP_885862.1 1572351 R 246196 CDS YP_885863.1 118471143 4531830 complement(1573257..1574171) 1 NC_008596.1 identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase 1574171 4531830 MSMEG_1481 Mycobacterium smegmatis str. MC2 155 methyltransferase YP_885863.1 1573257 R 246196 CDS YP_885864.1 118468732 4534260 complement(1574178..1575092) 1 NC_008596.1 identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase 1575092 4534260 MSMEG_1482 Mycobacterium smegmatis str. MC2 155 methyltransferase YP_885864.1 1574178 R 246196 CDS YP_885865.1 118473505 4533867 1575442..1576767 1 NC_008596.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1576767 secY 4533867 secY Mycobacterium smegmatis str. MC2 155 preprotein translocase subunit SecY YP_885865.1 1575442 D 246196 CDS YP_885866.1 118473144 4531206 1576764..1577309 1 NC_008596.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1577309 adk 4531206 adk Mycobacterium smegmatis str. MC2 155 adenylate kinase YP_885866.1 1576764 D 246196 CDS YP_885867.1 118472276 4534802 1577329..1578126 1 NC_008596.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 1578126 map 4534802 map Mycobacterium smegmatis str. MC2 155 methionine aminopeptidase YP_885867.1 1577329 D 246196 CDS YP_885868.1 118468828 4535405 1578235..1578777 1 NC_008596.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. tuberculosis this protein regulates polyketide synthases and secreted or membrane proteins; RNA polymerase sigma factor SigL 1578777 4535405 MSMEG_1486 Mycobacterium smegmatis str. MC2 155 RNA polymerase sigma factor SigL YP_885868.1 1578235 D 246196 CDS YP_885869.1 118472236 4532457 1578774..1579505 1 NC_008596.1 hypothetical protein 1579505 4532457 MSMEG_1487 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885869.1 1578774 D 246196 CDS YP_885870.1 118469623 4531595 1579678..1581408 1 NC_008596.1 identified by match to protein family HMM PF02775; match to protein family HMM PF02776; acetolactate synthase 1581408 4531595 MSMEG_1488 Mycobacterium smegmatis str. MC2 155 acetolactate synthase YP_885870.1 1579678 D 246196 CDS YP_885871.1 118470925 4533973 1581389..1582069 1 NC_008596.1 hypothetical protein 1582069 4533973 MSMEG_1489 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885871.1 1581389 D 246196 CDS YP_885872.1 118471583 4534445 1582078..1583100 1 NC_008596.1 3-oxoacyl-ACP synthase 1583100 4534445 MSMEG_1490 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP synthase YP_885872.1 1582078 D 246196 CDS YP_885873.1 118467512 4535523 1583124..1584137 1 NC_008596.1 identified by match to protein family HMM PF00155; histidinol-phosphate aminotransferase 2 1584137 4535523 MSMEG_1491 Mycobacterium smegmatis str. MC2 155 histidinol-phosphate aminotransferase 2 YP_885873.1 1583124 D 246196 CDS YP_885874.1 118469066 4537252 1584173..1584694 1 NC_008596.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1584694 4537252 MSMEG_1492 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_885874.1 1584173 D 246196 CDS YP_885875.1 118471701 4536424 complement(1584746..1585987) 1 NC_008596.1 identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730; sensor histidine kinase 1585987 4536424 MSMEG_1493 Mycobacterium smegmatis str. MC2 155 sensor histidine kinase YP_885875.1 1584746 R 246196 CDS YP_885876.1 118468546 4536098 complement(1585984..1586646) 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; transcriptional regulatory protein DegU 1586646 4536098 MSMEG_1494 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein DegU YP_885876.1 1585984 R 246196 CDS YP_885877.1 118469568 4531442 1586745..1587569 1 NC_008596.1 identified by match to protein family HMM PF00702; HAD-superfamily hydrolase 1587569 4531442 MSMEG_1495 Mycobacterium smegmatis str. MC2 155 HAD-superfamily hydrolase YP_885877.1 1586745 D 246196 CDS YP_885878.1 118470697 4532534 complement(1587649..1588521) 1 NC_008596.1 identified by match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR01692; 3-hydroxyisobutyrate dehydrogenase 1588521 mmsB 4532534 mmsB Mycobacterium smegmatis str. MC2 155 3-hydroxyisobutyrate dehydrogenase YP_885878.1 1587649 R 246196 CDS YP_885879.1 118472185 4533723 complement(1588538..1589725) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 1589725 4533723 MSMEG_1497 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_885879.1 1588538 R 246196 CDS YP_885880.1 118468130 4535218 complement(1589732..1591252) 1 NC_008596.1 identified by similarity to GB:AAA99190.1; match to protein family HMM PF00171; match to protein family HMM TIGR01722; methylmalonate-semialdehyde dehydrogenase 1591252 mmsA 4535218 mmsA Mycobacterium smegmatis str. MC2 155 methylmalonate-semialdehyde dehydrogenase YP_885880.1 1589732 R 246196 CDS YP_885881.1 118468886 4536679 1591424..1592929 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01494; oxygenase 1592929 4536679 MSMEG_1499 Mycobacterium smegmatis str. MC2 155 oxygenase YP_885881.1 1591424 D 246196 CDS YP_885882.1 118469361 4535875 1592926..1593525 1 NC_008596.1 identified by match to protein family HMM PF00440; match to protein family HMM PF02796; TetR family transcriptional regulator 1593525 4535875 MSMEG_1500 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885882.1 1592926 D 246196 CDS YP_885883.1 118470794 4536078 1593619..1594473 1 NC_008596.1 identified by match to protein family HMM TIGR00027; methyltransferase, , family protein 1594473 4536078 MSMEG_1501 Mycobacterium smegmatis str. MC2 155 methyltransferase, , family protein YP_885883.1 1593619 D 246196 CDS YP_885884.1 118471961 4536185 1594527..1595402 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1595402 4536185 MSMEG_1502 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_885884.1 1594527 D 246196 CDS YP_885885.1 118473059 4534611 1595399..1596112 1 NC_008596.1 antibiotic ABC transporter transmembrane protein 1596112 4534611 MSMEG_1503 Mycobacterium smegmatis str. MC2 155 antibiotic ABC transporter transmembrane protein YP_885885.1 1595399 D 246196 CDS YP_885886.1 118470648 4532407 1596109..1596867 1 NC_008596.1 antibiotic ABC transporter transmembrane protein 1596867 4532407 MSMEG_1504 Mycobacterium smegmatis str. MC2 155 antibiotic ABC transporter transmembrane protein YP_885886.1 1596109 D 246196 CDS YP_885887.1 118473997 4530956 complement(1596886..1597764) 1 NC_008596.1 identified by match to protein family HMM PF00892; integral membrane protein 1597764 4530956 MSMEG_1505 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_885887.1 1596886 R 246196 CDS YP_885888.1 118469638 4534099 complement(1597761..1598429) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1598429 4534099 MSMEG_1506 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885888.1 1597761 R 246196 CDS YP_885889.1 118471846 4536300 1598476..1599585 1 NC_008596.1 identified by match to protein family HMM PF03576; D-aminopeptidase 1599585 4536300 MSMEG_1507 Mycobacterium smegmatis str. MC2 155 D-aminopeptidase YP_885889.1 1598476 D 246196 CDS YP_885890.1 118469464 4535727 1599585..1601009 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 1601009 4535727 MSMEG_1508 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_885890.1 1599585 D 246196 CDS YP_885891.1 118472084 4537093 complement(1601016..1601612) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1601612 4537093 MSMEG_1509 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885891.1 1601016 R 246196 CDS YP_885892.1 118472261 4531570 1601665..1602363 1 NC_008596.1 identified by match to protein family HMM PF00881; oxidoreductase 1602363 4531570 MSMEG_1511 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_885892.1 1601665 D 246196 CDS YP_885893.1 118469056 4537242 complement(1602360..1602965) 1 NC_008596.1 identified by match to protein family HMM PF00908; dTDP-4-dehydrorhamnose 3,5-epimerase 1602965 4537242 MSMEG_1510 Mycobacterium smegmatis str. MC2 155 dTDP-4-dehydrorhamnose 3,5-epimerase YP_885893.1 1602360 R 246196 CDS YP_885894.1 118467903 4531259 complement(1602962..1603957) 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181; dTDP-glucose 4,6-dehydratase 1603957 rfbB 4531259 rfbB Mycobacterium smegmatis str. MC2 155 dTDP-glucose 4,6-dehydratase YP_885894.1 1602962 R 246196 CDS YP_885895.1 118467601 4531417 complement(1603984..1604835) 1 NC_008596.1 hypothetical protein 1604835 4531417 MSMEG_1513 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885895.1 1603984 R 246196 CDS YP_885896.1 118472332 4534223 complement(1604864..1605760) 1 NC_008596.1 hypothetical protein 1605760 4534223 MSMEG_1514 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885896.1 1604864 R 246196 CDS YP_885897.1 118470016 4532754 complement(1605862..1607334) 1 NC_008596.1 identified by match to protein family HMM PF00027; match to protein family HMM PF02518; two-component sensor histidine kinase 1607334 4532754 MSMEG_1515 Mycobacterium smegmatis str. MC2 155 two-component sensor histidine kinase YP_885897.1 1605862 R 246196 CDS YP_885898.1 118470493 4537177 complement(1607344..1609002) 1 NC_008596.1 identified by match to protein family HMM PF00070; match to protein family HMM PF00072; match to protein family HMM PF01266; match to protein family HMM PF07992; thioredoxin reductase 1609002 4537177 MSMEG_1516 Mycobacterium smegmatis str. MC2 155 thioredoxin reductase YP_885898.1 1607344 R 246196 CDS YP_885899.1 118470581 4531368 complement(1609139..1610719) 1 NC_008596.1 identified by match to protein family HMM PF01145; hypothetical protein 1610719 4531368 MSMEG_1517 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885899.1 1609139 R 246196 CDS YP_885900.1 118473272 4537702 complement(1610744..1611241) 1 NC_008596.1 hypothetical protein 1611241 4537702 MSMEG_1518 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885900.1 1610744 R 246196 CDS YP_885901.1 118472549 4532676 1611597..1611818 1 NC_008596.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1611818 infA 4532676 infA Mycobacterium smegmatis str. MC2 155 translation initiation factor IF-1 YP_885901.1 1611597 D 246196 CDS YP_885902.1 118473421 4537408 1611901..1612014 1 NC_008596.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 1612014 rpmJ 4537408 rpmJ Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L36 YP_885902.1 1611901 D 246196 CDS YP_885903.1 118473987 4531431 1612201..1612575 1 NC_008596.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1612575 rpsM 4531431 rpsM Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S13 YP_885903.1 1612201 D 246196 CDS YP_885904.1 118467427 4536043 1612581..1612997 1 NC_008596.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1612997 rpsK 4536043 rpsK Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S11 YP_885904.1 1612581 D 246196 CDS YP_885905.1 118468301 4533059 1613023..1613628 1 NC_008596.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1613628 rpsD 4533059 rpsD Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S4 YP_885905.1 1613023 D 246196 CDS YP_885906.1 118469556 4537502 1613721..1614773 1 NC_008596.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1614773 rpoA 4537502 rpoA Mycobacterium smegmatis str. MC2 155 DNA-directed RNA polymerase subunit alpha YP_885906.1 1613721 D 246196 CDS YP_885907.1 118471400 4534875 1614848..1615447 1 NC_008596.1 identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059; 50S ribosomal protein L17 1615447 4534875 MSMEG_1525 Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L17 YP_885907.1 1614848 D 246196 CDS YP_885908.1 118473191 4533308 1615467..1616342 1 NC_008596.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1616342 truA 4533308 truA Mycobacterium smegmatis str. MC2 155 tRNA pseudouridine synthase A YP_885908.1 1615467 D 246196 CDS YP_885909.1 118473530 4533630 complement(1616339..1617031) 1 NC_008596.1 identified by match to protein family HMM PF01083; cutinase 1617031 4533630 MSMEG_1526 Mycobacterium smegmatis str. MC2 155 cutinase YP_885909.1 1616339 R 246196 CDS YP_885910.1 118470563 4531506 complement(1617095..1617769) 1 NC_008596.1 identified by match to protein family HMM PF01083; cutinase 1617769 4531506 MSMEG_1528 Mycobacterium smegmatis str. MC2 155 cutinase YP_885910.1 1617095 R 246196 CDS YP_885911.1 118471093 4535858 complement(1617806..1618441) 1 NC_008596.1 identified by match to protein family HMM PF01083; serine esterase, cutinase 1618441 4535858 MSMEG_1529 Mycobacterium smegmatis str. MC2 155 serine esterase, cutinase YP_885911.1 1617806 R 246196 CDS YP_885912.1 118471639 4536514 complement(1618493..1619572) 1 NC_008596.1 identified by match to protein family HMM PF00892; integral membrane protein 1619572 4536514 MSMEG_1530 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_885912.1 1618493 R 246196 CDS YP_885913.1 118467800 4535976 1619643..1620203 1 NC_008596.1 identified by match to protein family HMM PF07336; hypothetical protein 1620203 4535976 MSMEG_1531 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885913.1 1619643 D 246196 CDS YP_885914.1 118468509 4535490 complement(1620225..1620545) 1 NC_008596.1 identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase 1620545 4535490 MSMEG_1532 Mycobacterium smegmatis str. MC2 155 antibiotic biosynthesis monooxygenase YP_885914.1 1620225 R 246196 CDS YP_885915.1 118471784 4536355 1620683..1622059 1 NC_008596.1 identified by match to protein family HMM PF05108; hypothetical protein 1622059 4536355 MSMEG_1534 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885915.1 1620683 D 246196 CDS YP_885916.1 118467437 4535446 complement(1622024..1623352) 1 NC_008596.1 identified by match to protein family HMM PF00082; subtilase 1623352 4535446 MSMEG_1533 Mycobacterium smegmatis str. MC2 155 subtilase YP_885916.1 1622024 R 246196 CDS YP_885917.1 118468927 4537461 complement(1623349..1624662) 1 NC_008596.1 hypothetical protein 1624662 4537461 MSMEG_1535 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885917.1 1623349 R 246196 CDS YP_885918.1 118470570 4531513 1624781..1628416 1 NC_008596.1 identified by match to protein family HMM PF01580; ftsk/SpoIIIE family protein 1628416 4531513 MSMEG_1536 Mycobacterium smegmatis str. MC2 155 ftsk/SpoIIIE family protein YP_885918.1 1624781 D 246196 CDS YP_885919.1 118471245 4531521 1628401..1629507 1 NC_008596.1 hypothetical protein 1629507 4531521 MSMEG_1537 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885919.1 1628401 D 246196 CDS YP_885920.1 118471975 4536161 1629580..1629891 1 NC_008596.1 hypothetical protein 1629891 4536161 MSMEG_1538 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885920.1 1629580 D 246196 CDS YP_885921.1 118470444 4534507 1629917..1630213 1 NC_008596.1 hypothetical protein 1630213 4534507 MSMEG_1539 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885921.1 1629917 D 246196 CDS YP_885922.1 118469993 4533116 complement(1630283..1631665) 1 NC_008596.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent RNA helicase 1631665 4533116 MSMEG_1540 Mycobacterium smegmatis str. MC2 155 ATP-dependent RNA helicase YP_885922.1 1630283 R 246196 CDS YP_885923.1 118471229 4534416 1631708..1631833 1 NC_008596.1 hypothetical protein 1631833 4534416 MSMEG_1541 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885923.1 1631708 D 246196 CDS YP_885924.1 118469100 4535292 1631951..1633222 1 NC_008596.1 identified by match to protein family HMM PF00486; match to protein family HMM PF01590; transcriptional regulator 1633222 4535292 MSMEG_1542 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_885924.1 1631951 D 246196 CDS YP_885925.1 118467594 4531410 1633314..1634858 1 NC_008596.1 identified by match to protein family HMM PF00171; eptc-inducible aldehyde dehydrogenase 1634858 4531410 MSMEG_1543 Mycobacterium smegmatis str. MC2 155 eptc-inducible aldehyde dehydrogenase YP_885925.1 1633314 D 246196 CDS YP_885926.1 118472987 4532267 1635013..1635411 1 NC_008596.1 identified by match to protein family HMM PF03928; PduO protein 1635411 4532267 MSMEG_1544 Mycobacterium smegmatis str. MC2 155 PduO protein YP_885926.1 1635013 D 246196 CDS YP_885927.1 118471112 4533471 complement(1635427..1636125) 1 NC_008596.1 hypothetical protein 1636125 4533471 MSMEG_1545 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885927.1 1635427 R 246196 CDS YP_885928.1 118472086 4537095 1636280..1636708 1 NC_008596.1 identified by match to protein family HMM PF02287; coenzyme B12-dependent glycerol dehydrogenase small subunit 1636708 4537095 MSMEG_1546 Mycobacterium smegmatis str. MC2 155 coenzyme B12-dependent glycerol dehydrogenase small subunit YP_885928.1 1636280 D 246196 CDS YP_885929.1 118472362 4531613 1636718..1638430 1 NC_008596.1 identified by match to protein family HMM PF02286; glycerol dehydratase large subunit 1638430 4531613 MSMEG_1547 Mycobacterium smegmatis str. MC2 155 glycerol dehydratase large subunit YP_885929.1 1636718 D 246196 CDS YP_885930.1 118467606 4533068 1638427..1639029 1 NC_008596.1 identified by match to protein family HMM PF02288; propanediol utilization: dehydratase, medium subunit 1639029 4533068 MSMEG_1548 Mycobacterium smegmatis str. MC2 155 propanediol utilization: dehydratase, medium subunit YP_885930.1 1638427 D 246196 CDS YP_885931.1 118472367 4534757 1640922..1641263 1 NC_008596.1 PduH protein 1641263 4534757 MSMEG_1550 Mycobacterium smegmatis str. MC2 155 PduH protein YP_885931.1 1640922 D 246196 CDS YP_885932.1 118471906 4536245 complement(1641323..1641517) 1 NC_008596.1 hypothetical protein 1641517 4536245 MSMEG_1551 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885932.1 1641323 R 246196 CDS YP_885933.1 118469117 4535330 1641497..1642909 1 NC_008596.1 identified by match to protein family HMM PF00324; match to protein family HMM TIGR00908; ethanolamine permease 1642909 eat 4535330 eat Mycobacterium smegmatis str. MC2 155 ethanolamine permease YP_885933.1 1641497 D 246196 CDS YP_885934.1 118470052 4534597 1642906..1644321 1 NC_008596.1 identified by match to protein family HMM PF06751; ethanolamine ammonia-lyase, large subunit 1644321 eutB 4534597 eutB Mycobacterium smegmatis str. MC2 155 ethanolamine ammonia-lyase, large subunit YP_885934.1 1642906 D 246196 CDS YP_885935.1 118473833 4531987 1644318..1645094 1 NC_008596.1 catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit 1645094 eutC 4531987 eutC Mycobacterium smegmatis str. MC2 155 ethanolamine ammonia-lyase small subunit YP_885935.1 1644318 D 246196 CDS YP_885936.1 118471450 4535125 1646296..1646739 1 NC_008596.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1646739 rplM 4535125 rplM Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L13 YP_885936.1 1646296 D 246196 CDS YP_885937.1 118468477 4537298 1646736..1647188 1 NC_008596.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1647188 rpsI 4537298 rpsI Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S9 YP_885937.1 1646736 D 246196 CDS YP_885938.1 118472585 4534366 1647548..1648012 1 NC_008596.1 hypothetical protein 1648012 4534366 MSMEG_1558 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885938.1 1647548 D 246196 CDS YP_885939.1 118467852 4535479 1648164..1649525 1 NC_008596.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1649525 glmM 4535479 glmM Mycobacterium smegmatis str. MC2 155 phosphoglucosamine mutase YP_885939.1 1648164 D 246196 CDS YP_885940.1 118469781 4535805 1649573..1649881 1 NC_008596.1 hypothetical protein 1649881 4535805 MSMEG_1560 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885940.1 1649573 D 246196 CDS YP_885941.1 118469291 4532630 complement(1651286..1652176) 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 1652176 4532630 MSMEG_1561 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_885941.1 1651286 R 246196 CDS YP_885942.1 118470280 4537541 1652167..1652964 1 NC_008596.1 short-chain dehydrogenase/reductase SDR 1652964 4537541 MSMEG_1563 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase SDR YP_885942.1 1652167 D 246196 CDS YP_885943.1 118467371 4534056 complement(1652977..1654452) 1 NC_008596.1 identified by match to protein family HMM PF03055; lignostilbene-alpha,beta-dioxygenase 1654452 4534056 MSMEG_1564 Mycobacterium smegmatis str. MC2 155 lignostilbene-alpha,beta-dioxygenase YP_885943.1 1652977 R 246196 CDS YP_885944.1 118468120 4535207 1654695..1655318 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1655318 4535207 MSMEG_1565 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885944.1 1654695 D 246196 CDS YP_885945.1 118472841 4537437 complement(1655346..1656389) 1 NC_008596.1 identified by match to protein family HMM PF00296; oxidoreductase 1656389 4537437 MSMEG_1566 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_885945.1 1655346 R 246196 CDS YP_885946.1 118468621 4535019 complement(1656437..1657288) 1 NC_008596.1 hypothetical protein 1657288 4535019 MSMEG_1567 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885946.1 1656437 R 246196 CDS YP_885947.1 118469514 4536717 1657467..1659353 1 NC_008596.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1659353 glmS 4536717 glmS Mycobacterium smegmatis str. MC2 155 glucosamine--fructose-6-phosphate aminotransferase YP_885947.1 1657467 D 246196 CDS YP_885948.1 118470678 4531741 1659357..1660295 1 NC_008596.1 identified by match to protein family HMM PF00561; carboxylesterase 1660295 4531741 MSMEG_1570 Mycobacterium smegmatis str. MC2 155 carboxylesterase YP_885948.1 1659357 D 246196 CDS YP_885949.1 118472426 4532043 complement(1660216..1660425) 1 NC_008596.1 hypothetical protein 1660425 4532043 MSMEG_1569 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885949.1 1660216 R 246196 CDS YP_885950.1 118473482 4531186 complement(1660346..1661329) 1 NC_008596.1 identified by match to protein family HMM PF00892; integral membrane protein 1661329 4531186 MSMEG_1571 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_885950.1 1660346 R 246196 CDS YP_885951.1 118473322 4530981 1661357..1662760 1 NC_008596.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator 1662760 4530981 MSMEG_1572 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_885951.1 1661357 D 246196 CDS YP_885952.1 118469057 4537243 1662840..1664252 1 NC_008596.1 identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197; carbohydrate kinase 1664252 4537243 MSMEG_1573 Mycobacterium smegmatis str. MC2 155 carbohydrate kinase YP_885952.1 1662840 D 246196 CDS YP_885953.1 118473737 4537342 1664273..1665652 1 NC_008596.1 identified by match to protein family HMM PF00282; match to protein family HMM TIGR01788; glutamate decarboxylase 1665652 4537342 MSMEG_1574 Mycobacterium smegmatis str. MC2 155 glutamate decarboxylase YP_885953.1 1664273 D 246196 CDS YP_885954.1 118472399 4531809 1665708..1666877 1 NC_008596.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 1666877 alr 4531809 alr Mycobacterium smegmatis str. MC2 155 alanine racemase YP_885954.1 1665708 D 246196 CDS YP_885955.1 118472905 4533774 1666901..1667959 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 1667959 4533774 MSMEG_1576 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_885955.1 1666901 D 246196 CDS YP_885956.1 118473830 4531984 1667952..1668419 1 NC_008596.1 identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein 1668419 4531984 MSMEG_1577 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885956.1 1667952 D 246196 CDS YP_885957.1 118467836 4535463 1668416..1669060 1 NC_008596.1 identified by match to protein family HMM PF00814; peptidase M22, glycoprotease 1669060 4535463 MSMEG_1578 Mycobacterium smegmatis str. MC2 155 peptidase M22, glycoprotease YP_885957.1 1668416 D 246196 CDS YP_885958.1 118471587 4536538 1669057..1669533 1 NC_008596.1 identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575; ribosomal-protein-alanine acetyltransferase 1669533 rimI 4536538 rimI Mycobacterium smegmatis str. MC2 155 ribosomal-protein-alanine acetyltransferase YP_885958.1 1669057 D 246196 CDS YP_885959.1 118473010 4531302 1669530..1670552 1 NC_008596.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 1670552 gcp 4531302 gcp Mycobacterium smegmatis str. MC2 155 DNA-binding/iron metalloprotein/AP endonuclease YP_885959.1 1669530 D 246196 CDS YP_885960.1 118467733 4534016 1670549..1670998 1 NC_008596.1 hypothetical protein 1670998 4534016 MSMEG_1581 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885960.1 1670549 D 246196 CDS YP_885961.1 118470431 4532222 1671178..1671480 1 NC_008596.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1671480 groES 4532222 groES Mycobacterium smegmatis str. MC2 155 co-chaperonin GroES YP_885961.1 1671178 D 246196 CDS YP_885962.1 118469216 4533270 1671564..1673186 1 NC_008596.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; molecular chaperone GroEL 1673186 groEL 4533270 groEL Mycobacterium smegmatis str. MC2 155 molecular chaperone GroEL YP_885962.1 1671564 D 246196 CDS YP_885963.1 118471828 4536321 1673236..1673706 1 NC_008596.1 hypothetical protein 1673706 4536321 MSMEG_1584 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885963.1 1673236 D 246196 CDS YP_885964.1 118470829 4532515 1673703..1674266 1 NC_008596.1 identified by match to protein family HMM PF07883; cupin 1674266 4532515 MSMEG_1585 Mycobacterium smegmatis str. MC2 155 cupin YP_885964.1 1673703 D 246196 CDS YP_885965.1 118471628 4536503 complement(1674284..1675408) 1 NC_008596.1 identified by match to protein family HMM PF00144; beta-lactamase 1675408 4536503 MSMEG_1586 Mycobacterium smegmatis str. MC2 155 beta-lactamase YP_885965.1 1674284 R 246196 CDS YP_885966.1 118472896 4534039 1675529..1675864 1 NC_008596.1 hypothetical protein 1675864 4534039 MSMEG_1588 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885966.1 1675529 D 246196 CDS YP_885967.1 118468549 4536101 complement(1675840..1676820) 1 NC_008596.1 alpha/beta hydrolase 1676820 4536101 MSMEG_1587 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_885967.1 1675840 R 246196 CDS YP_885968.1 118469960 4530923 complement(1676817..1677860) 1 NC_008596.1 hypothetical protein 1677860 4530923 MSMEG_1589 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885968.1 1676817 R 246196 CDS YP_885969.1 118467532 4535994 1677871..1678182 1 NC_008596.1 hypothetical protein 1678182 4535994 MSMEG_1590 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885969.1 1677871 D 246196 CDS YP_885970.1 118469899 4533218 1678351..1679754 1 NC_008596.1 identified by match to protein family HMM PF01609; TnpC protein 1679754 4533218 MSMEG_1591 Mycobacterium smegmatis str. MC2 155 TnpC protein YP_885970.1 1678351 D 246196 CDS YP_885971.1 118468483 4537672 1680305..1681108 1 NC_008596.1 hypothetical protein 1681108 4537672 MSMEG_1592 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885971.1 1680305 D 246196 CDS YP_885972.1 118470128 4534499 1681151..1681948 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase 1681948 4534499 MSMEG_1594 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_885972.1 1681151 D 246196 CDS YP_885973.1 118472692 4531660 complement(1681937..1682101) 1 NC_008596.1 hypothetical protein 1682101 4531660 MSMEG_1593 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885973.1 1681937 R 246196 CDS YP_885974.1 118467573 4532863 complement(1682146..1682877) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF07993; oxidoreductase 1682877 4532863 MSMEG_1595 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_885974.1 1682146 R 246196 CDS YP_885975.1 118473220 4531070 1682974..1683543 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 1683543 4531070 MSMEG_1596 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_885975.1 1682974 D 246196 CDS YP_885976.1 118471283 4532177 complement(1683664..1683954) 1 NC_008596.1 identified by match to protein family HMM PF02467; transcription factor WhiB 1683954 4532177 MSMEG_1597 Mycobacterium smegmatis str. MC2 155 transcription factor WhiB YP_885976.1 1683664 R 246196 CDS YP_885977.1 118472066 4536706 1684388..1685194 1 NC_008596.1 hypothetical protein 1685194 4536706 MSMEG_1598 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885977.1 1684388 D 246196 CDS YP_885978.1 118470176 4530811 1685284..1685862 1 NC_008596.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this protein is involved in expression of ribosome-associated gene products in stationary phase; RNA polymerase sigma factor SigD 1685862 4530811 MSMEG_1599 Mycobacterium smegmatis str. MC2 155 RNA polymerase sigma factor SigD YP_885978.1 1685284 D 246196 CDS YP_885979.1 118468270 4535757 1685855..1687054 1 NC_008596.1 hypothetical protein 1687054 4535757 MSMEG_1600 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885979.1 1685855 D 246196 CDS YP_885980.1 118470151 4531710 complement(1687085..1687495) 1 NC_008596.1 hypothetical protein 1687495 4531710 MSMEG_1601 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885980.1 1687085 R 246196 CDS YP_885981.1 118467449 4535458 1687637..1689178 1 NC_008596.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 1689178 guaB 4535458 guaB Mycobacterium smegmatis str. MC2 155 inosine 5'-monophosphate dehydrogenase YP_885981.1 1687637 D 246196 CDS YP_885982.1 118473142 4531203 1689207..1690334 1 NC_008596.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase 1690334 4531203 MSMEG_1603 Mycobacterium smegmatis str. MC2 155 inosine 5-monophosphate dehydrogenase YP_885982.1 1689207 D 246196 CDS YP_885983.1 118473493 4532126 1690403..1692139 1 NC_008596.1 identified by match to protein family HMM PF00037; match to protein family HMM PF01266; FAD dependent oxidoreductase 1692139 4532126 MSMEG_1604 Mycobacterium smegmatis str. MC2 155 FAD dependent oxidoreductase YP_885983.1 1690403 D 246196 CDS YP_885984.1 118471381 4534975 1692222..1692881 1 NC_008596.1 identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate transporter regulatory protein PhoU 1692881 phoU 4534975 phoU Mycobacterium smegmatis str. MC2 155 phosphate transporter regulatory protein PhoU YP_885984.1 1692222 D 246196 CDS YP_885985.1 118470040 4531655 1693036..1694649 1 NC_008596.1 identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; benzoylformate decarboxylase 1694649 4531655 MSMEG_1606 Mycobacterium smegmatis str. MC2 155 benzoylformate decarboxylase YP_885985.1 1693036 D 246196 CDS YP_885986.1 118470620 4532978 1694678..1695097 1 NC_008596.1 tautomerase 1695097 4532978 MSMEG_1607 Mycobacterium smegmatis str. MC2 155 tautomerase YP_885986.1 1694678 D 246196 CDS YP_885987.1 118468782 4535673 complement(1695107..1697470) 1 NC_008596.1 identified by match to protein family HMM PF03632; match to protein family HMM PF03633; match to protein family HMM PF03636; glycosyl transferase family protein 1697470 4535673 MSMEG_1608 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_885987.1 1695107 R 246196 CDS YP_885988.1 118470807 4531917 1698411..1699973 1 NC_008596.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1699973 guaA 4531917 guaA Mycobacterium smegmatis str. MC2 155 GMP synthase YP_885988.1 1698411 D 246196 CDS YP_885989.1 118472773 4531864 1699984..1700661 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1700661 4531864 MSMEG_1611 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_885989.1 1699984 D 246196 CDS YP_885990.1 118472383 4534773 1700804..1701661 1 NC_008596.1 identified by match to protein family HMM PF00497; extracellular solute-binding protein 1701661 4534773 MSMEG_1612 Mycobacterium smegmatis str. MC2 155 extracellular solute-binding protein YP_885990.1 1700804 D 246196 CDS YP_885991.1 118469246 4535382 1701672..1702463 1 NC_008596.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; polar amino acid ABC transporter inner membrane protein 1702463 4535382 MSMEG_1613 Mycobacterium smegmatis str. MC2 155 polar amino acid ABC transporter inner membrane protein YP_885991.1 1701672 D 246196 CDS YP_885992.1 118471052 4537125 1702467..1703264 1 NC_008596.1 identified by match to protein family HMM PF00005; glutamine transport ATP-binding protein GlnQ 1703264 4537125 MSMEG_1614 Mycobacterium smegmatis str. MC2 155 glutamine transport ATP-binding protein GlnQ YP_885992.1 1702467 D 246196 CDS YP_885993.1 118469378 4535892 1703278..1704852 1 NC_008596.1 identified by match to protein family HMM PF01019; gamma-glutamyltranspeptidase 1704852 ggt 4535892 ggt Mycobacterium smegmatis str. MC2 155 gamma-glutamyltranspeptidase YP_885993.1 1703278 D 246196 CDS YP_885994.1 118473419 4537406 complement(1706845..1708497) 1 NC_008596.1 kumamolisin 1708497 4537406 MSMEG_1617 Mycobacterium smegmatis str. MC2 155 kumamolisin YP_885994.1 1706845 R 246196 CDS YP_885995.1 118473753 4537729 complement(1708535..1708825) 1 NC_008596.1 hypothetical protein 1708825 4537729 MSMEG_1618 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885995.1 1708535 R 246196 CDS YP_885996.1 118467563 4535517 1709112..1709237 1 NC_008596.1 hypothetical protein 1709237 4535517 MSMEG_1619 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885996.1 1709112 D 246196 CDS YP_885997.1 118472482 4532433 1709234..1709941 1 NC_008596.1 hypothetical protein 1709941 4532433 MSMEG_1620 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_885997.1 1709234 D 246196 CDS YP_885998.1 118473914 4536980 1709944..1711521 1 NC_008596.1 DNA repair polymerase 1711521 4536980 MSMEG_1622 Mycobacterium smegmatis str. MC2 155 DNA repair polymerase YP_885998.1 1709944 D 246196 CDS YP_885999.1 118469555 4537501 complement(1711512..1712564) 1 NC_008596.1 identified by match to protein family HMM PF01156; pyrimidine-specific ribonucleoside hydrolase RihA 1712564 4537501 MSMEG_1621 Mycobacterium smegmatis str. MC2 155 pyrimidine-specific ribonucleoside hydrolase RihA YP_885999.1 1711512 R 246196 CDS YP_886000.1 118470009 4532747 complement(1712618..1714654) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; short chain dehydrogenase 1714654 4532747 MSMEG_1623 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_886000.1 1712618 R 246196 CDS YP_886001.1 118472486 4532437 1714853..1715740 1 NC_008596.1 universal stress protein family protein 1715740 4532437 MSMEG_1624 Mycobacterium smegmatis str. MC2 155 universal stress protein family protein YP_886001.1 1714853 D 246196 CDS YP_886002.1 118467356 4534715 1715737..1717305 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid transporter 1717305 4534715 MSMEG_1625 Mycobacterium smegmatis str. MC2 155 amino acid transporter YP_886002.1 1715737 D 246196 CDS YP_886003.1 118468217 4537030 complement(1717307..1718188) 1 NC_008596.1 DNA-binding protein 1718188 4537030 MSMEG_1626 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_886003.1 1717307 R 246196 CDS YP_886004.1 118470568 4531511 1718346..1719197 1 NC_008596.1 identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 1719197 4531511 MSMEG_1628 Mycobacterium smegmatis str. MC2 155 oxidoreductase, short chain dehydrogenase/reductase YP_886004.1 1718346 D 246196 CDS YP_886005.1 118471549 4532197 complement(1719178..1719336) 1 NC_008596.1 hypothetical protein 1719336 4532197 MSMEG_1627 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886005.1 1719178 R 246196 CDS YP_886006.1 118470974 4531894 complement(1719261..1720430) 1 NC_008596.1 hypothetical protein 1720430 4531894 MSMEG_1629 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886006.1 1719261 R 246196 CDS YP_886007.1 118470674 4531737 complement(1720546..1721337) 1 NC_008596.1 identified by match to protein family HMM PF00106; 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase 1721337 4531737 MSMEG_1630 Mycobacterium smegmatis str. MC2 155 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase YP_886007.1 1720546 R 246196 CDS YP_886008.1 118468345 4532096 1721434..1722288 1 NC_008596.1 DNA-binding protein 1722288 4532096 MSMEG_1631 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_886008.1 1721434 D 246196 CDS YP_886009.1 118471589 4536540 1722325..1725612 1 NC_008596.1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase 1725612 dnaE2 4536540 dnaE2 Mycobacterium smegmatis str. MC2 155 error-prone DNA polymerase YP_886009.1 1722325 D 246196 CDS YP_886010.1 118473396 4537014 complement(1725589..1726479) 1 NC_008596.1 hypothetical protein 1726479 4537014 MSMEG_1632 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886010.1 1725589 R 246196 CDS YP_886011.1 118468739 4534267 1726761..1727360 1 NC_008596.1 forkhead-associated protein 1727360 4534267 MSMEG_1634 Mycobacterium smegmatis str. MC2 155 forkhead-associated protein YP_886011.1 1726761 D 246196 CDS YP_886012.1 118472454 4533595 1727405..1728046 1 NC_008596.1 identified by match to protein family HMM PF00881; nitroreductase 1728046 4533595 MSMEG_1635 Mycobacterium smegmatis str. MC2 155 nitroreductase YP_886012.1 1727405 D 246196 CDS YP_886013.1 118468881 4533766 complement(1728064..1728528) 1 NC_008596.1 identified by match to protein family HMM PF00588; TrmH family RNA methyltransferase 1728528 4533766 MSMEG_1636 Mycobacterium smegmatis str. MC2 155 TrmH family RNA methyltransferase YP_886013.1 1728064 R 246196 CDS YP_886014.1 118470327 4535205 1728945..1731728 1 NC_008596.1 identified by match to protein family HMM PF00672; match to protein family HMM PF02518; sensor signal transduction histidine kinase 1731728 4535205 MSMEG_1637 Mycobacterium smegmatis str. MC2 155 sensor signal transduction histidine kinase YP_886014.1 1728945 D 246196 CDS YP_886015.1 118471090 4535855 1731725..1732132 1 NC_008596.1 identified by match to protein family HMM PF03259; roadblock/LC7 domain-contain protein 1732132 4535855 MSMEG_1638 Mycobacterium smegmatis str. MC2 155 roadblock/LC7 domain-contain protein YP_886015.1 1731725 D 246196 CDS YP_886016.1 118472605 4536883 1732149..1732514 1 NC_008596.1 identified by match to protein family HMM PF05331; hypothetical protein 1732514 4536883 MSMEG_1639 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886016.1 1732149 D 246196 CDS YP_886017.1 118473306 4535177 1732495..1733076 1 NC_008596.1 identified by match to protein family HMM PF03029; ATP/GTP-binding protein 1733076 4535177 MSMEG_1640 Mycobacterium smegmatis str. MC2 155 ATP/GTP-binding protein YP_886017.1 1732495 D 246196 CDS YP_886018.1 118470978 4531898 1733082..1733657 1 NC_008596.1 identified by match to protein family HMM PF00805; hypothetical protein 1733657 4531898 MSMEG_1641 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886018.1 1733082 D 246196 CDS YP_886019.1 118471926 4536188 complement(1733760..1736459) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061; ABC transporter ATP-binding protein 1736459 4536188 MSMEG_1642 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_886019.1 1733760 R 246196 CDS YP_886020.1 118472455 4533596 1736549..1738318 1 NC_008596.1 hypothetical protein 1738318 4533596 MSMEG_1643 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886020.1 1736549 D 246196 CDS YP_886021.1 118469968 4535742 complement(1738323..1739228) 1 NC_008596.1 hypothetical protein 1739228 4535742 MSMEG_1644 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886021.1 1738323 R 246196 CDS YP_886022.1 118473868 4531116 complement(1739234..1740454) 1 NC_008596.1 identified by match to protein family HMM PF00724; NADH:flavin oxidoreductase 1740454 4531116 MSMEG_1645 Mycobacterium smegmatis str. MC2 155 NADH:flavin oxidoreductase YP_886022.1 1739234 R 246196 CDS YP_886023.1 118467544 4536006 1740535..1741386 1 NC_008596.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1741386 4536006 MSMEG_1647 Mycobacterium smegmatis str. MC2 155 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_886023.1 1740535 D 246196 CDS YP_886024.1 118471619 4536532 complement(1741293..1742453) 1 NC_008596.1 identified by match to protein family HMM PF00398; ribosomal RNA adenine dimethylase 1742453 4536532 MSMEG_1646 Mycobacterium smegmatis str. MC2 155 ribosomal RNA adenine dimethylase YP_886024.1 1741293 R 246196 CDS YP_886025.1 118468249 4537434 1742683..1743300 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 1743300 4537434 MSMEG_1648 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_886025.1 1742683 D 246196 CDS YP_886026.1 118474056 4531776 1743297..1744841 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01494; FAD dependent oxidoreductase 1744841 4531776 MSMEG_1649 Mycobacterium smegmatis str. MC2 155 FAD dependent oxidoreductase YP_886026.1 1743297 D 246196 CDS YP_886027.1 118473798 4531277 complement(1744845..1745582) 1 NC_008596.1 methyltransferase type 11 1745582 4531277 MSMEG_1650 Mycobacterium smegmatis str. MC2 155 methyltransferase type 11 YP_886027.1 1744845 R 246196 CDS YP_886028.1 118469217 4533271 complement(1745579..1746721) 1 NC_008596.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 1746721 metX 4533271 metX Mycobacterium smegmatis str. MC2 155 homoserine O-acetyltransferase YP_886028.1 1745579 R 246196 CDS YP_886029.1 118469926 4535837 complement(1746742..1748073) 1 NC_008596.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 1748073 4535837 MSMEG_1652 Mycobacterium smegmatis str. MC2 155 O-acetylhomoserine aminocarboxypropyltransferase YP_886029.1 1746742 R 246196 CDS YP_886030.1 118470756 4533659 complement(1748300..1748419) 1 NC_008596.1 hypothetical protein 1748419 4533659 MSMEG_1653 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886030.1 1748300 R 246196 CDS YP_886031.1 118467432 4535441 1748543..1750774 1 NC_008596.1 identified by match to protein family HMM PF03971; match to protein family HMM TIGR00178; isocitrate dehydrogenase 1750774 4535441 MSMEG_1654 Mycobacterium smegmatis str. MC2 155 isocitrate dehydrogenase YP_886031.1 1748543 D 246196 CDS YP_886032.1 118471160 4530950 complement(1750851..1751690) 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 1751690 4530950 MSMEG_1655 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_886032.1 1750851 R 246196 CDS YP_886033.1 118470089 4532964 1751775..1752596 1 NC_008596.1 identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 1752596 xth 4532964 xth Mycobacterium smegmatis str. MC2 155 exodeoxyribonuclease III YP_886033.1 1751775 D 246196 CDS YP_886034.1 118471756 4536364 1752612..1753628 1 NC_008596.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 1753628 trpS 4536364 trpS Mycobacterium smegmatis str. MC2 155 tryptophanyl-tRNA synthetase YP_886034.1 1752612 D 246196 CDS YP_886035.1 118472662 4535082 1753643..1754680 1 NC_008596.1 identified by match to protein family HMM PF03631; match to protein family HMM TIGR00766; ribonuclease 1754680 4535082 MSMEG_1658 Mycobacterium smegmatis str. MC2 155 ribonuclease YP_886035.1 1753643 D 246196 CDS YP_886036.1 118469812 4532838 complement(1754723..1755040) 1 NC_008596.1 identified by match to protein family HMM PF00893; multidrug resistance protein, SMR family protein 1755040 4532838 MSMEG_1659 Mycobacterium smegmatis str. MC2 155 multidrug resistance protein, SMR family protein YP_886036.1 1754723 R 246196 CDS YP_886037.1 118468756 4534245 1755150..1756019 1 NC_008596.1 identified by match to protein family HMM PF03060; oxidoreductase, 2-nitropropane dioxygenase 1756019 4534245 MSMEG_1660 Mycobacterium smegmatis str. MC2 155 oxidoreductase, 2-nitropropane dioxygenase YP_886037.1 1755150 D 246196 CDS YP_886038.1 118471047 4536749 complement(1756022..1757215) 1 NC_008596.1 identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase 1757215 4536749 MSMEG_1661 Mycobacterium smegmatis str. MC2 155 D-alanyl-D-alanine carboxypeptidase YP_886038.1 1756022 R 246196 CDS YP_886039.1 118472070 4536710 complement(1757394..1758779) 1 NC_008596.1 identified by match to protein family HMM PF00202; hypothetical protein 1758779 4536710 MSMEG_1662 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886039.1 1757394 R 246196 CDS YP_886040.1 118470812 4531922 complement(1758776..1759246) 1 NC_008596.1 identified by match to protein family HMM PF01037; AsnC family transcriptional regulator 1759246 4531922 MSMEG_1663 Mycobacterium smegmatis str. MC2 155 AsnC family transcriptional regulator YP_886040.1 1758776 R 246196 CDS YP_886041.1 118472562 4534146 complement(1759209..1759499) 1 NC_008596.1 hypothetical protein 1759499 4534146 MSMEG_1664 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886041.1 1759209 R 246196 CDS YP_886042.1 118469784 4535808 1759434..1760915 1 NC_008596.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase 1760915 4535808 MSMEG_1665 Mycobacterium smegmatis str. MC2 155 gamma-aminobutyraldehyde dehydrogenase YP_886042.1 1759434 D 246196 CDS YP_886043.1 118473352 4532018 1761019..1761933 1 NC_008596.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigJ 1761933 4532018 MSMEG_1666 Mycobacterium smegmatis str. MC2 155 RNA polymerase sigma factor SigJ YP_886043.1 1761019 D 246196 CDS YP_886044.1 118472007 4533608 1761933..1762454 1 NC_008596.1 identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 1762454 4533608 MSMEG_1668 Mycobacterium smegmatis str. MC2 155 pyridoxamine 5'-phosphate oxidase YP_886044.1 1761933 D 246196 CDS YP_886045.1 118469821 4532847 complement(1763124..1763909) 1 NC_008596.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 1763909 sdhB 4532847 sdhB Mycobacterium smegmatis str. MC2 155 succinate dehydrogenase iron-sulfur subunit YP_886045.1 1763124 R 246196 CDS YP_886046.1 118468078 4533025 complement(1763912..1765666) 1 NC_008596.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 1765666 sdhA 4533025 sdhA Mycobacterium smegmatis str. MC2 155 succinate dehydrogenase flavoprotein subunit YP_886046.1 1763912 R 246196 CDS YP_886047.1 118473638 4533506 complement(1765677..1766147) 1 NC_008596.1 succinate dehydrogenase hydrophobic membrane anchor protein SdhD 1766147 4533506 MSMEG_1671 Mycobacterium smegmatis str. MC2 155 succinate dehydrogenase hydrophobic membrane anchor protein SdhD YP_886047.1 1765677 R 246196 CDS YP_886048.1 118471568 4534430 complement(1766144..1766560) 1 NC_008596.1 identified by match to protein family HMM PF01127; match to protein family HMM TIGR02970; succinate dehydrogenase, cytochrome b556 subunit 1766560 sdhC 4534430 sdhC Mycobacterium smegmatis str. MC2 155 succinate dehydrogenase, cytochrome b556 subunit YP_886048.1 1766144 R 246196 CDS YP_886049.1 118472624 4537274 1766790..1767176 1 NC_008596.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase 1767176 cdd 4537274 cdd Mycobacterium smegmatis str. MC2 155 cytidine deaminase YP_886049.1 1766790 D 246196 CDS YP_886050.1 118469779 4535803 complement(1767247..1767342) 1 NC_008596.1 hypothetical protein 1767342 4535803 MSMEG_1674 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886050.1 1767247 R 246196 CDS YP_886051.1 118470133 4534504 1767305..1768546 1 NC_008596.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase 1768546 deoA 4534504 deoA Mycobacterium smegmatis str. MC2 155 thymidine phosphorylase YP_886051.1 1767305 D 246196 CDS YP_886052.1 118467725 4534008 1768749..1769849 1 NC_008596.1 catalyzes the formation of inosine from adenosine; adenosine deaminase 1769849 add 4534008 add Mycobacterium smegmatis str. MC2 155 adenosine deaminase YP_886052.1 1768749 D 246196 CDS YP_886053.1 118473843 4531997 1769956..1770891 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 1770891 4531997 MSMEG_1678 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_886053.1 1769956 D 246196 CDS YP_886054.1 118470635 4532394 complement(1770884..1772305) 1 NC_008596.1 identified by match to protein family HMM PF00206; aspartate ammonia-lyase 1772305 aspA 4532394 aspA Mycobacterium smegmatis str. MC2 155 aspartate ammonia-lyase YP_886054.1 1770884 R 246196 CDS YP_886055.1 118469679 4536812 complement(1772302..1773459) 1 NC_008596.1 identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891; AmiB protein 1773459 4536812 MSMEG_1679 Mycobacterium smegmatis str. MC2 155 AmiB protein YP_886055.1 1772302 R 246196 CDS YP_886056.1 118472895 4534038 complement(1773456..1774130) 1 NC_008596.1 identified by match to protein family HMM PF06267; hypothetical protein 1774130 4534038 MSMEG_1680 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886056.1 1773456 R 246196 CDS YP_886057.1 118473804 4531283 complement(1774127..1774570) 1 NC_008596.1 identified by match to protein family HMM PF01042; endoribonuclease L-PSP superfamily protein 1774570 4531283 MSMEG_1681 Mycobacterium smegmatis str. MC2 155 endoribonuclease L-PSP superfamily protein YP_886057.1 1774127 R 246196 CDS YP_886058.1 118468571 4533706 complement(1774567..1775832) 1 NC_008596.1 flavin-containing monooxygenase FMO 1775832 4533706 MSMEG_1682 Mycobacterium smegmatis str. MC2 155 flavin-containing monooxygenase FMO YP_886058.1 1774567 R 246196 CDS YP_886059.1 118469050 4536864 complement(1775984..1777435) 1 NC_008596.1 identified by match to protein family HMM PF02133; cytosine/purines uracil thiamine allantoin permease 1777435 4536864 MSMEG_1683 Mycobacterium smegmatis str. MC2 155 cytosine/purines uracil thiamine allantoin permease YP_886059.1 1775984 R 246196 CDS YP_886060.1 118470513 4537567 complement(1777578..1778873) 1 NC_008596.1 hypothetical protein 1778873 4537567 MSMEG_1684 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886060.1 1777578 R 246196 CDS YP_886061.1 118473688 4531085 complement(1778947..1779114) 1 NC_008596.1 hypothetical protein 1779114 4531085 MSMEG_1685 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886061.1 1778947 R 246196 CDS YP_886062.1 118468604 4532384 complement(1779111..1780178) 1 NC_008596.1 identified by match to protein family HMM PF00877; NPL/P60-family protein membrane protein 1780178 4532384 MSMEG_1686 Mycobacterium smegmatis str. MC2 155 NPL/P60-family protein membrane protein YP_886062.1 1779111 R 246196 CDS YP_886063.1 118473556 4532427 complement(1780185..1780475) 1 NC_008596.1 hypothetical protein 1780475 4532427 MSMEG_1687 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886063.1 1780185 R 246196 CDS YP_886064.1 118468076 4533023 complement(1780527..1780937) 1 NC_008596.1 identified by match to protein family HMM PF07883; cupin 1780937 4533023 MSMEG_1688 Mycobacterium smegmatis str. MC2 155 cupin YP_886064.1 1780527 R 246196 CDS YP_886065.1 118470686 4531749 complement(1780950..1781672) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF07993; 3-oxoacyl-ACP reductase 1781672 4531749 MSMEG_1689 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_886065.1 1780950 R 246196 CDS YP_886066.1 118470755 4533658 complement(1781688..1782320) 1 NC_008596.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; ECF sigma factor RpoE1 1782320 4533658 MSMEG_1690 Mycobacterium smegmatis str. MC2 155 ECF sigma factor RpoE1 YP_886066.1 1781688 R 246196 CDS YP_886067.1 118471728 4536414 complement(1782369..1785062) 1 NC_008596.1 identified by match to protein family HMM PF00196; transcriptional regulatory protein 1785062 4536414 MSMEG_1691 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_886067.1 1782369 R 246196 CDS YP_886068.1 118472691 4531659 1785177..1786091 1 NC_008596.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02957; ECF-family protein RNA polymerase sigma factor 1786091 4531659 MSMEG_1692 Mycobacterium smegmatis str. MC2 155 ECF-family protein RNA polymerase sigma factor YP_886068.1 1785177 D 246196 CDS YP_886069.1 118471540 4537621 complement(1786092..1787828) 1 NC_008596.1 identified by match to protein family HMM PF00890; match to protein family HMM PF02910; succinate dehydrogenase [ubiquinone] flavoprotein subunit 1787828 4537621 MSMEG_1693 Mycobacterium smegmatis str. MC2 155 succinate dehydrogenase [ubiquinone] flavoprotein subunit YP_886069.1 1786092 R 246196 CDS YP_886070.1 118470186 4530821 1787883..1788506 1 NC_008596.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 1788506 upp 4530821 upp Mycobacterium smegmatis str. MC2 155 uracil phosphoribosyltransferase YP_886070.1 1787883 D 246196 CDS YP_886071.1 118472051 4535397 complement(1788531..1790147) 1 NC_008596.1 identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase 1790147 4535397 MSMEG_1695 Mycobacterium smegmatis str. MC2 155 phosphoglucomutase/phosphomannomutase YP_886071.1 1788531 R 246196 CDS YP_886072.1 118467604 4531420 complement(1790144..1790620) 1 NC_008596.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1790620 4531420 MSMEG_1696 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_886072.1 1790144 R 246196 CDS YP_886073.1 118469153 4534739 1790726..1791835 1 NC_008596.1 identified by match to protein family HMM PF05145; match to protein family HMM TIGR03082; ammonia monooxygenase 1791835 4534739 MSMEG_1698 Mycobacterium smegmatis str. MC2 155 ammonia monooxygenase YP_886073.1 1790726 D 246196 CDS YP_886074.1 118471733 4536419 complement(1791793..1792557) 1 NC_008596.1 hypothetical protein 1792557 4536419 MSMEG_1697 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886074.1 1791793 R 246196 CDS YP_886075.1 118473742 4537347 complement(1792582..1793730) 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01494; pentachlorophenol 4-monooxygenase 1793730 4537347 MSMEG_1699 Mycobacterium smegmatis str. MC2 155 pentachlorophenol 4-monooxygenase YP_886075.1 1792582 R 246196 CDS YP_886076.1 118468904 4537066 1793829..1794374 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1794374 4537066 MSMEG_1700 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886076.1 1793829 D 246196 CDS YP_886077.1 118470367 4532314 complement(1794381..1795175) 1 NC_008596.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 1795175 4532314 MSMEG_1701 Mycobacterium smegmatis str. MC2 155 purine nucleoside phosphorylase YP_886077.1 1794381 R 246196 CDS YP_886078.1 118469160 4534746 1795223..1796407 1 NC_008596.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; amidohydrolase 1796407 4534746 MSMEG_1702 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_886078.1 1795223 D 246196 CDS YP_886079.1 118468608 4532388 1796404..1797576 1 NC_008596.1 identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891; amidohydrolase 1797576 4532388 MSMEG_1703 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_886079.1 1796404 D 246196 CDS YP_886080.1 118473829 4531983 1797877..1798974 1 NC_008596.1 ABC transporter 1798974 4531983 MSMEG_1704 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_886080.1 1797877 D 246196 CDS YP_886081.1 118469817 4532843 1798971..1800500 1 NC_008596.1 identified by match to protein family HMM PF00005; D-xylose transport ATP-binding protein XylG 1800500 4532843 MSMEG_1705 Mycobacterium smegmatis str. MC2 155 D-xylose transport ATP-binding protein XylG YP_886081.1 1798971 D 246196 CDS YP_886082.1 118469080 4537635 1800501..1801760 1 NC_008596.1 identified by match to protein family HMM PF02653; xylose transporter permease XylH 1801760 4537635 MSMEG_1706 Mycobacterium smegmatis str. MC2 155 xylose transporter permease XylH YP_886082.1 1800501 D 246196 CDS YP_886083.1 118472876 4531360 complement(1801804..1802463) 1 NC_008596.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; phosphatase YfbT 1802463 4531360 MSMEG_1707 Mycobacterium smegmatis str. MC2 155 phosphatase YfbT YP_886083.1 1801804 R 246196 CDS YP_886084.1 118472387 4531797 complement(1802474..1803478) 1 NC_008596.1 identified by similarity to SP:P03023; match to protein family HMM PF00356; match to protein family HMM PF00532; ribose operon repressor 1803478 4531797 MSMEG_1708 Mycobacterium smegmatis str. MC2 155 ribose operon repressor YP_886084.1 1802474 R 246196 CDS YP_886085.1 118469527 4536731 complement(1803499..1804524) 1 NC_008596.1 identified by match to protein family HMM PF02653; ABC transporter 1804524 4536731 MSMEG_1709 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_886085.1 1803499 R 246196 CDS YP_886086.1 118468037 4531394 complement(1804521..1805594) 1 NC_008596.1 identified by match to protein family HMM PF02653; ribose transporter permease RbsC 1805594 4531394 MSMEG_1710 Mycobacterium smegmatis str. MC2 155 ribose transporter permease RbsC YP_886086.1 1804521 R 246196 CDS YP_886087.1 118473251 4537311 complement(1805591..1807099) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1807099 4537311 MSMEG_1711 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_886087.1 1805591 R 246196 CDS YP_886088.1 118473741 4537346 complement(1807122..1808108) 1 NC_008596.1 identified by match to protein family HMM PF00532; ABC transporter periplasmic protein 1808108 4537346 MSMEG_1712 Mycobacterium smegmatis str. MC2 155 ABC transporter periplasmic protein YP_886088.1 1807122 R 246196 CDS YP_886089.1 118471065 4537138 1808508..1810199 1 NC_008596.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase 1810199 araB 4537138 araB Mycobacterium smegmatis str. MC2 155 ribulokinase YP_886089.1 1808508 D 246196 CDS YP_886090.1 118471823 4536316 1810196..1810891 1 NC_008596.1 catalyzes the formation of D-xylulose 5-phosphate from L-ribulose 5-phosphate; L-ribulose-5-phosphate 4-epimerase 1810891 4536316 MSMEG_1714 Mycobacterium smegmatis str. MC2 155 L-ribulose-5-phosphate 4-epimerase YP_886090.1 1810196 D 246196 CDS YP_886091.1 118469669 4535431 1810894..1812399 1 NC_008596.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 1812399 araA 4535431 araA Mycobacterium smegmatis str. MC2 155 L-arabinose isomerase YP_886091.1 1810894 D 246196 CDS YP_886092.1 118469824 4532850 1812681..1812956 1 NC_008596.1 identified by similarity to GP:15619022; match to protein family HMM PF01527; IS3 family protein element, transposase orfA 1812956 4532850 MSMEG_1716 Mycobacterium smegmatis str. MC2 155 IS3 family protein element, transposase orfA YP_886092.1 1812681 D 246196 CDS YP_886093.1 118467851 4535478 complement(1813566..1814966) 1 NC_008596.1 identified by similarity to SP:P37248; match to protein family HMM PF00665; ISMsm8, transposase 1814966 4535478 MSMEG_1717 Mycobacterium smegmatis str. MC2 155 ISMsm8, transposase YP_886093.1 1813566 R 246196 CDS YP_886094.1 118472703 4531671 1815873..1816148 1 NC_008596.1 similar at the nucleotide level to IS1137 in the IS Finder database.; identified by match to protein family HMM PF01527; IS1137, transposase orfA 1816148 4531671 MSMEG_1720 Mycobacterium smegmatis str. MC2 155 IS1137, transposase orfA YP_886094.1 1815873 D 246196 CDS YP_886095.1 118473564 4530998 1816151..1817104 1 NC_008596.1 similar at the nucleotide level to IS1137 in the IS Finder database.; identified by match to protein family HMM PF00665; IS1137, transposase orfB 1817104 4530998 MSMEG_1721 Mycobacterium smegmatis str. MC2 155 IS1137, transposase orfB YP_886095.1 1816151 D 246196 CDS YP_886096.1 118469305 4533370 complement(1817135..1817806) 1 NC_008596.1 hypothetical protein 1817806 4533370 MSMEG_1722 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886096.1 1817135 R 246196 CDS YP_886097.1 118472147 4532484 1818047..1818370 1 NC_008596.1 hypothetical protein 1818370 4532484 MSMEG_1723 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886097.1 1818047 D 246196 CDS YP_886098.1 118467793 4535715 complement(1818478..1818885) 1 NC_008596.1 hypothetical protein 1818885 4535715 MSMEG_1724 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886098.1 1818478 R 246196 CDS YP_886099.1 118470547 4533001 1819287..1819676 1 NC_008596.1 transposase 1819676 4533001 MSMEG_1725 Mycobacterium smegmatis str. MC2 155 transposase YP_886099.1 1819287 D 246196 CDS YP_886100.1 118473369 4530845 1819676..1820689 1 NC_008596.1 identified by match to protein family HMM PF00665; transposase 1820689 4530845 MSMEG_1726 Mycobacterium smegmatis str. MC2 155 transposase YP_886100.1 1819676 D 246196 CDS YP_886101.1 118472404 4531325 1821176..1821511 1 NC_008596.1 identified by similarity to GP:16551202; match to protein family HMM PF01527; ISMsm1, transposase orfA 1821511 4531325 MSMEG_1728 Mycobacterium smegmatis str. MC2 155 ISMsm1, transposase orfA YP_886101.1 1821176 D 246196 CDS YP_886102.1 118472462 4533828 1821508..1822437 1 NC_008596.1 identified by similarity to GP:16551202; match to protein family HMM PF00665; ISMsm1, transposase orfB 1822437 4533828 MSMEG_1730 Mycobacterium smegmatis str. MC2 155 ISMsm1, transposase orfB YP_886102.1 1821508 D 246196 CDS YP_886103.1 118472777 4531868 1823395..1824546 1 NC_008596.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; transposase IS116/IS110/IS902 1824546 4531868 MSMEG_1732 Mycobacterium smegmatis str. MC2 155 transposase IS116/IS110/IS902 YP_886103.1 1823395 D 246196 CDS YP_886104.1 118473511 4533873 complement(1824488..1825807) 1 NC_008596.1 identified by similarity to SP:P35883; match to protein family HMM PF00872; IS6120, transposase 1825807 4533873 MSMEG_1731 Mycobacterium smegmatis str. MC2 155 IS6120, transposase YP_886104.1 1824488 R 246196 CDS YP_886105.1 118471877 4536253 1826089..1826988 1 NC_008596.1 hypothetical protein 1826988 4536253 MSMEG_1733 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886105.1 1826089 D 246196 CDS YP_886106.1 118470573 4531516 complement(1827076..1827543) 1 NC_008596.1 hypothetical protein 1827543 4531516 MSMEG_1734 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886106.1 1827076 R 246196 CDS YP_886107.1 118473132 4531193 1827585..1829000 1 NC_008596.1 catalyzes the reduction of nonspecific electron acceptors such as 2,6-dimethyl-1,4-benzoquinone and 5-hydroxy-1,4-naphthaquinone; does not have lipoamide dehydrogenase activity; flavoprotein disulfide reductase 1829000 4531193 MSMEG_1735 Mycobacterium smegmatis str. MC2 155 flavoprotein disulfide reductase YP_886107.1 1827585 D 246196 CDS YP_886108.1 118468636 4533568 1829060..1830805 1 NC_008596.1 identified by match to protein family HMM PF01266; glycerol-3-phosphate dehydrogenase 1830805 4533568 MSMEG_1736 Mycobacterium smegmatis str. MC2 155 glycerol-3-phosphate dehydrogenase YP_886108.1 1829060 D 246196 CDS YP_886109.1 118473504 4533866 1830802..1831677 1 NC_008596.1 identified by match to protein family HMM PF00849; RNA pseudouridine synthase 1831677 4533866 MSMEG_1737 Mycobacterium smegmatis str. MC2 155 RNA pseudouridine synthase YP_886109.1 1830802 D 246196 CDS YP_886110.1 118470859 4536791 complement(1831699..1832286) 1 NC_008596.1 transmembrane protein 1832286 4536791 MSMEG_1738 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_886110.1 1831699 R 246196 CDS YP_886111.1 118470344 4534927 1832435..1833205 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; dehydrogenase/reductase SDR family protein member 4 1833205 4534927 MSMEG_1740 Mycobacterium smegmatis str. MC2 155 dehydrogenase/reductase SDR family protein member 4 YP_886111.1 1832435 D 246196 CDS YP_886112.1 118468122 4535209 complement(1833174..1833962) 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 1833962 4535209 MSMEG_1739 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase/isomerase YP_886112.1 1833174 R 246196 CDS YP_886113.1 118468964 4533528 complement(1833986..1834660) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1834660 4533528 MSMEG_1741 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886113.1 1833986 R 246196 CDS YP_886114.1 118471893 4536230 1834732..1835823 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; oxidoreductase 1835823 4536230 MSMEG_1742 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_886114.1 1834732 D 246196 CDS YP_886115.1 118473665 4531236 1835832..1836980 1 NC_008596.1 identified by match to protein family HMM PF00487; Fatty acid desaturase 1836980 4531236 MSMEG_1743 Mycobacterium smegmatis str. MC2 155 Fatty acid desaturase YP_886115.1 1835832 D 246196 CDS YP_886116.1 118473276 4537706 complement(1837050..1837967) 1 NC_008596.1 hypothetical protein 1837967 4537706 MSMEG_1744 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886116.1 1837050 R 246196 CDS YP_886117.1 118467375 4534060 complement(1838043..1838657) 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 1838657 4534060 MSMEG_1745 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_886117.1 1838043 R 246196 CDS YP_886118.1 118468905 4537067 1838767..1840137 1 NC_008596.1 identified by match to protein family HMM PF01565; 6-hydroxy-D-nicotine oxidase 1840137 4537067 MSMEG_1746 Mycobacterium smegmatis str. MC2 155 6-hydroxy-D-nicotine oxidase YP_886118.1 1838767 D 246196 CDS YP_886119.1 118473960 4533031 1840251..1840865 1 NC_008596.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase sigma-70 factor 1840865 4533031 MSMEG_1747 Mycobacterium smegmatis str. MC2 155 RNA polymerase sigma-70 factor YP_886119.1 1840251 D 246196 CDS YP_886120.1 118471129 4531816 1840862..1841299 1 NC_008596.1 identified by match to protein family HMM PF06172; hypothetical protein 1841299 4531816 MSMEG_1748 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886120.1 1840862 D 246196 CDS YP_886121.1 118471963 4536148 1841151..1841429 1 NC_008596.1 hypothetical protein 1841429 4536148 MSMEG_1750 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886121.1 1841151 D 246196 CDS YP_886122.1 118469135 4532551 complement(1841333..1842214) 1 NC_008596.1 monooxygenase 1842214 4532551 MSMEG_1749 Mycobacterium smegmatis str. MC2 155 monooxygenase YP_886122.1 1841333 R 246196 CDS YP_886123.1 118471889 4536226 complement(1842253..1843281) 1 NC_008596.1 identified by match to protein family HMM PF00248; norsolorinic acid reductase 1843281 4536226 MSMEG_1751 Mycobacterium smegmatis str. MC2 155 norsolorinic acid reductase YP_886123.1 1842253 R 246196 CDS YP_886124.1 118467752 4535652 complement(1843338..1843448) 1 NC_008596.1 hypothetical protein 1843448 4535652 MSMEG_1752 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886124.1 1843338 R 246196 CDS YP_886125.1 118468736 4534264 1843365..1844117 1 NC_008596.1 identified by match to protein family HMM PF01048; match to protein family HMM TIGR01704; MTA/SAH nucleosidase 1844117 mtnN 4534264 mtnN Mycobacterium smegmatis str. MC2 155 MTA/SAH nucleosidase YP_886125.1 1843365 D 246196 CDS YP_886126.1 118473584 4534857 1844249..1844629 1 NC_008596.1 hypothetical protein 1844629 4534857 MSMEG_1754 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886126.1 1844249 D 246196 CDS YP_886127.1 118472554 4532681 complement(1844642..1845010) 1 NC_008596.1 anti-sigm factor, ChrR 1845010 4532681 MSMEG_1755 Mycobacterium smegmatis str. MC2 155 anti-sigm factor, ChrR YP_886127.1 1844642 R 246196 CDS YP_886128.1 118472403 4531813 complement(1845058..1845816) 1 NC_008596.1 identified by match to protein family HMM PF01149; match to protein family HMM PF06827; match to protein family HMM PF06831; endonuclease VIII 1845816 4531813 MSMEG_1756 Mycobacterium smegmatis str. MC2 155 endonuclease VIII YP_886128.1 1845058 R 246196 CDS YP_886129.1 118468040 4531397 complement(1845819..1850342) 1 NC_008596.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; DEAD/DEAH box helicase 1850342 4531397 MSMEG_1757 Mycobacterium smegmatis str. MC2 155 DEAD/DEAH box helicase YP_886129.1 1845819 R 246196 CDS YP_886130.1 118470351 4534625 complement(1850404..1850577) 1 NC_008596.1 hypothetical protein 1850577 4534625 MSMEG_1758 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886130.1 1850404 R 246196 CDS YP_886131.1 118468023 4533104 1850576..1850854 1 NC_008596.1 hypothetical protein 1850854 4533104 MSMEG_1759 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886131.1 1850576 D 246196 CDS YP_886132.1 118470501 4537553 1850826..1852142 1 NC_008596.1 identified by match to protein family HMM PF06762; integral membrane protein 1852142 4537553 MSMEG_1761 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_886132.1 1850826 D 246196 CDS YP_886133.1 118472822 4537046 complement(1852110..1852925) 1 NC_008596.1 identified by match to protein family HMM PF00106; short-chain dehydrogenase/reductase SDR 1852925 4537046 MSMEG_1760 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase SDR YP_886133.1 1852110 R 246196 CDS YP_886134.1 118470359 4534634 complement(1852964..1854547) 1 NC_008596.1 identified by match to protein family HMM PF00171; piperideine-6-carboxylic acid dehydrogenase 1854547 4534634 MSMEG_1762 Mycobacterium smegmatis str. MC2 155 piperideine-6-carboxylic acid dehydrogenase YP_886134.1 1852964 R 246196 CDS YP_886135.1 118469678 4536811 1854610..1855083 1 NC_008596.1 identified by match to protein family HMM PF01037; leucine-responsive regulatory protein 1855083 4536811 MSMEG_1763 Mycobacterium smegmatis str. MC2 155 leucine-responsive regulatory protein YP_886135.1 1854610 D 246196 CDS YP_886136.1 118468713 4532782 1855136..1856500 1 NC_008596.1 catalyzes the formation of 2-aminoadipate 6-semiladehyde and glutamate from lysine and 2-oxoglutarate; L-lysine aminotransferase 1856500 4532782 MSMEG_1764 Mycobacterium smegmatis str. MC2 155 L-lysine aminotransferase YP_886136.1 1855136 D 246196 CDS YP_886137.1 118467366 4534051 complement(1856508..1857038) 1 NC_008596.1 identified by match to protein family HMM PF04471; restriction endonuclease 1857038 4534051 MSMEG_1765 Mycobacterium smegmatis str. MC2 155 restriction endonuclease YP_886137.1 1856508 R 246196 CDS YP_886138.1 118473996 4531440 1857176..1857421 1 NC_008596.1 hypothetical protein 1857421 4531440 MSMEG_1766 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886138.1 1857176 D 246196 CDS YP_886139.1 118468813 4534069 1857437..1857826 1 NC_008596.1 hypothetical protein 1857826 4534069 MSMEG_1767 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886139.1 1857437 D 246196 CDS YP_886140.1 118472651 4535071 1857823..1858440 1 NC_008596.1 hypothetical protein 1858440 4535071 MSMEG_1768 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886140.1 1857823 D 246196 CDS YP_886141.1 118471198 4531492 1858494..1858793 1 NC_008596.1 UsfY protein 1858793 4531492 MSMEG_1769 Mycobacterium smegmatis str. MC2 155 UsfY protein YP_886141.1 1858494 D 246196 CDS YP_886142.1 118469797 4535938 complement(1858875..1859117) 1 NC_008596.1 identified by match to protein family HMM PF05532; hypothetical protein 1859117 4535938 MSMEG_1770 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886142.1 1858875 R 246196 CDS YP_886143.1 118469810 4535951 1859306..1859974 1 NC_008596.1 identified by match to protein family HMM PF01170; match to protein family HMM PF05175; match to protein family HMM TIGR00537; methylase 1859974 4535951 MSMEG_1771 Mycobacterium smegmatis str. MC2 155 methylase YP_886143.1 1859306 D 246196 CDS YP_886144.1 118470590 4531377 1859971..1860186 1 NC_008596.1 hypothetical protein 1860186 4531377 MSMEG_1772 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886144.1 1859971 D 246196 CDS YP_886145.1 118473399 4537017 complement(1860268..1861290) 1 NC_008596.1 hypothetical protein 1861290 4537017 MSMEG_1773 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886145.1 1860268 R 246196 CDS YP_886146.1 118467667 4536933 complement(1861547..1862041) 1 NC_008596.1 hypothetical protein 1862041 4536933 MSMEG_1774 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886146.1 1861547 R 246196 CDS YP_886147.1 118472892 4534035 1862204..1863577 1 NC_008596.1 cytochrome P450 monooxygenase 1863577 4534035 MSMEG_1775 Mycobacterium smegmatis str. MC2 155 cytochrome P450 monooxygenase YP_886147.1 1862204 D 246196 CDS YP_886148.1 118471506 4536845 complement(1863597..1864526) 1 NC_008596.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 1864526 4536845 MSMEG_1776 Mycobacterium smegmatis str. MC2 155 ribonuclease Z YP_886148.1 1863597 R 246196 CDS YP_886149.1 118472245 4532466 1864669..1864974 1 NC_008596.1 UsfY protein 1864974 4532466 MSMEG_1777 Mycobacterium smegmatis str. MC2 155 UsfY protein YP_886149.1 1864669 D 246196 CDS YP_886150.1 118467511 4535522 complement(1864985..1865326) 1 NC_008596.1 hypothetical protein 1865326 4535522 MSMEG_1778 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886150.1 1864985 R 246196 CDS YP_886151.1 118472303 4532775 complement(1865313..1865714) 1 NC_008596.1 hypothetical protein 1865714 4532775 MSMEG_1779 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886151.1 1865313 R 246196 CDS YP_886152.1 118471150 4530940 complement(1865711..1866940) 1 NC_008596.1 hypothetical protein 1866940 4530940 MSMEG_1780 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886152.1 1865711 R 246196 CDS YP_886153.1 118470525 4536117 complement(1866940..1867401) 1 NC_008596.1 hypothetical protein 1867401 4536117 MSMEG_1781 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886153.1 1866940 R 246196 CDS YP_886154.1 118471841 4536295 complement(1867419..1868306) 1 NC_008596.1 identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 1868306 4536295 MSMEG_1782 Mycobacterium smegmatis str. MC2 155 oxidoreductase, short chain dehydrogenase/reductase YP_886154.1 1867419 R 246196 CDS YP_886155.1 118472537 4532663 complement(1868321..1868551) 1 NC_008596.1 hypothetical protein 1868551 4532663 MSMEG_1783 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886155.1 1868321 R 246196 CDS YP_886156.1 118471358 4533242 1868617..1869747 1 NC_008596.1 hypothetical protein 1869747 4533242 MSMEG_1785 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886156.1 1868617 D 246196 CDS YP_886157.1 118469134 4532550 complement(1868641..1869657) 1 NC_008596.1 type I topoisomerase 1869657 4532550 MSMEG_1784 Mycobacterium smegmatis str. MC2 155 type I topoisomerase YP_886157.1 1868641 R 246196 CDS YP_886158.1 118469103 4535295 1869761..1870345 1 NC_008596.1 RsbW protein 1870345 4535295 MSMEG_1787 Mycobacterium smegmatis str. MC2 155 RsbW protein YP_886158.1 1869761 D 246196 CDS YP_886159.1 118472641 4537660 complement(1870342..1870770) 1 NC_008596.1 identified by match to protein family HMM PF01740; STAS domain-containing protein 1870770 4537660 MSMEG_1786 Mycobacterium smegmatis str. MC2 155 STAS domain-containing protein YP_886159.1 1870342 R 246196 CDS YP_886160.1 118468788 4535306 1871258..1871512 1 NC_008596.1 hypothetical protein 1871512 4535306 MSMEG_1788 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886160.1 1871258 D 246196 CDS YP_886161.1 118467771 4533402 1871520..1871675 1 NC_008596.1 hypothetical protein 1871675 4533402 MSMEG_1789 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886161.1 1871520 D 246196 CDS YP_886162.1 118468300 4533058 1871713..1871970 1 NC_008596.1 hypothetical protein 1871970 4533058 MSMEG_1790 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886162.1 1871713 D 246196 CDS YP_886163.1 118469227 4535363 1872145..1872453 1 NC_008596.1 UsfY protein 1872453 4535363 MSMEG_1791 Mycobacterium smegmatis str. MC2 155 UsfY protein YP_886163.1 1872145 D 246196 CDS YP_886164.1 118468059 4534174 complement(1872508..1872858) 1 NC_008596.1 hypothetical protein 1872858 4534174 MSMEG_1792 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886164.1 1872508 R 246196 CDS YP_886165.1 118470985 4531905 1872888..1873895 1 NC_008596.1 identified by match to protein family HMM PF00296; dehydrogenase 1873895 4531905 MSMEG_1794 Mycobacterium smegmatis str. MC2 155 dehydrogenase YP_886165.1 1872888 D 246196 CDS YP_886166.1 118470379 4532326 complement(1873863..1874426) 1 NC_008596.1 membrane protein 1874426 4532326 MSMEG_1793 Mycobacterium smegmatis str. MC2 155 membrane protein YP_886166.1 1873863 R 246196 CDS YP_886167.1 118470517 4536109 complement(1874566..1875648) 1 NC_008596.1 identified by match to protein family HMM PF00107; 2-deoxy-scyllo-inosamine dehydrogenase 1875648 4536109 MSMEG_1795 Mycobacterium smegmatis str. MC2 155 2-deoxy-scyllo-inosamine dehydrogenase YP_886167.1 1874566 R 246196 CDS YP_886168.1 118469539 4537113 complement(1875645..1877078) 1 NC_008596.1 identified by match to protein family HMM PF01266; membrane protein 1877078 4537113 MSMEG_1796 Mycobacterium smegmatis str. MC2 155 membrane protein YP_886168.1 1875645 R 246196 CDS YP_886169.1 118470712 4533927 complement(1877075..1877791) 1 NC_008596.1 identified by match to protein family HMM PF00561; salicylate esterase 1877791 4533927 MSMEG_1797 Mycobacterium smegmatis str. MC2 155 salicylate esterase YP_886169.1 1877075 R 246196 CDS YP_886170.1 118473466 4534910 complement(1877776..1879104) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily protein 1879104 4534910 MSMEG_1798 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_886170.1 1877776 R 246196 CDS YP_886171.1 118472774 4531865 1879301..1880209 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator 1880209 4531865 MSMEG_1799 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_886171.1 1879301 D 246196 CDS YP_886172.1 118468632 4533564 complement(1880234..1880365) 1 NC_008596.1 hypothetical protein 1880365 4533564 MSMEG_1800 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886172.1 1880234 R 246196 CDS YP_886173.1 118467882 4535257 1880491..1880622 1 NC_008596.1 hypothetical protein 1880622 4535257 MSMEG_1801 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886173.1 1880491 D 246196 CDS YP_886174.1 118473343 4532008 1880724..1881143 1 NC_008596.1 identified by match to protein family HMM PF06150; ChaB protein 1881143 4532008 MSMEG_1802 Mycobacterium smegmatis str. MC2 155 ChaB protein YP_886174.1 1880724 D 246196 CDS YP_886175.1 118469037 4536851 1881247..1881663 1 NC_008596.1 RsbW protein 1881663 4536851 MSMEG_1803 Mycobacterium smegmatis str. MC2 155 RsbW protein YP_886175.1 1881247 D 246196 CDS YP_886176.1 118470482 4537166 1881660..1882412 1 NC_008596.1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is a general stress response regulator; expressed in stationary phase and under nitrogen depletion and cold shock; RNA polymerase sigma factor SigF 1882412 4537166 MSMEG_1804 Mycobacterium smegmatis str. MC2 155 RNA polymerase sigma factor SigF YP_886176.1 1881660 D 246196 CDS YP_886177.1 118471927 4536189 1882438..1882986 1 NC_008596.1 hypothetical protein 1882986 4536189 MSMEG_1806 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886177.1 1882438 D 246196 CDS YP_886178.1 118470451 4534514 complement(1882976..1883332) 1 NC_008596.1 hypothetical protein 1883332 4534514 MSMEG_1805 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886178.1 1882976 R 246196 CDS YP_886179.1 118469108 4535301 complement(1883433..1885229) 1 NC_008596.1 identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786; acetyl-/propionyl-coenzyme A carboxylase subunit alpha 1885229 4535301 MSMEG_1807 Mycobacterium smegmatis str. MC2 155 acetyl-/propionyl-coenzyme A carboxylase subunit alpha YP_886179.1 1883433 R 246196 CDS YP_886180.1 118473389 4536635 complement(1885624..1886034) 1 NC_008596.1 identified by match to protein family HMM PF02657; Fe-S metabolism associated SufE 1886034 4536635 MSMEG_1808 Mycobacterium smegmatis str. MC2 155 Fe-S metabolism associated SufE YP_886180.1 1885624 R 246196 CDS YP_886181.1 118472457 4533598 complement(1886037..1886924) 1 NC_008596.1 identified by match to protein family HMM PF00581; thiosulfate sulfurtransferase 1886924 4533598 MSMEG_1809 Mycobacterium smegmatis str. MC2 155 thiosulfate sulfurtransferase YP_886181.1 1886037 R 246196 CDS YP_886182.1 118467994 4531314 complement(1887074..1887283) 1 NC_008596.1 hypothetical protein 1887283 4531314 MSMEG_1810 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886182.1 1887074 R 246196 CDS YP_886183.1 118469503 4533330 complement(1887457..1888092) 1 NC_008596.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 1888092 maf 4533330 maf Mycobacterium smegmatis str. MC2 155 Maf-like protein YP_886183.1 1887457 R 246196 CDS YP_886184.1 118472385 4531795 complement(1888189..1888473) 1 NC_008596.1 hypothetical protein 1888473 4531795 MSMEG_1812 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886184.1 1888189 R 246196 CDS YP_886185.1 118471917 4536218 complement(1888497..1890125) 1 NC_008596.1 identified by match to protein family HMM PF01039; propionyl-CoA carboxylase subunit beta 1890125 4536218 MSMEG_1813 Mycobacterium smegmatis str. MC2 155 propionyl-CoA carboxylase subunit beta YP_886185.1 1888497 R 246196 CDS YP_886186.1 118472217 4531467 1890327..1890539 1 NC_008596.1 hypothetical protein 1890539 4531467 MSMEG_1814 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886186.1 1890327 D 246196 CDS YP_886187.1 118468933 4537467 complement(1890966..1891139) 1 NC_008596.1 hypothetical protein 1891139 4537467 MSMEG_1815 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886187.1 1890966 R 246196 CDS YP_886188.1 118471315 4534655 1892734..1893252 1 NC_008596.1 identified by match to protein family HMM PF03703; membrane flanked domain-containing protein 1893252 4534655 MSMEG_1818 Mycobacterium smegmatis str. MC2 155 membrane flanked domain-containing protein YP_886188.1 1892734 D 246196 CDS YP_886189.1 118469379 4535893 complement(1893207..1893878) 1 NC_008596.1 identified by match to protein family HMM PF04138; transmembrane protein 1893878 4535893 MSMEG_1817 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_886189.1 1893207 R 246196 CDS YP_886190.1 118470258 4537150 1893955..1895181 1 NC_008596.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 1895181 purK 4537150 purK Mycobacterium smegmatis str. MC2 155 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_886190.1 1893955 D 246196 CDS YP_886191.1 118467408 4535830 1895208..1895687 1 NC_008596.1 identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase catalytic subunit 1895687 purE 4535830 purE Mycobacterium smegmatis str. MC2 155 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_886191.1 1895208 D 246196 CDS YP_886192.1 118471048 4536750 1896033..1897202 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 1897202 4536750 MSMEG_1821 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_886192.1 1896033 D 246196 CDS YP_886193.1 118472517 4533747 1897225..1898037 1 NC_008596.1 identified by match to protein family HMM PF02237; match to protein family HMM PF03099; match to protein family HMM TIGR00121; biotin-[acetyl-CoA-carboxylase] ligase 1898037 4533747 MSMEG_1822 Mycobacterium smegmatis str. MC2 155 biotin-[acetyl-CoA-carboxylase] ligase YP_886193.1 1897225 D 246196 CDS YP_886194.1 118468911 4537073 complement(1898113..1898817) 1 NC_008596.1 identified by match to protein family HMM TIGR03089; hypothetical protein 1898817 4537073 MSMEG_1823 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886194.1 1898113 R 246196 CDS YP_886195.1 118470097 4534932 complement(1898840..1900321) 1 NC_008596.1 identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; LytR family transcriptional regulator 1900321 4534932 MSMEG_1824 Mycobacterium smegmatis str. MC2 155 LytR family transcriptional regulator YP_886195.1 1898840 R 246196 CDS YP_886196.1 118472789 4533132 1900308..1901291 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01214; dTDP-4-dehydrorhamnose reductase 1901291 rfbD 4533132 rfbD Mycobacterium smegmatis str. MC2 155 dTDP-4-dehydrorhamnose reductase YP_886196.1 1900308 D 246196 CDS YP_886197.1 118471030 4534486 1901315..1902184 1 NC_008596.1 identified by match to protein family HMM PF00535; dTDP-RhA:a-D-GlcNAc-diphosphoryl polyprenol, a-3-L-rhamnosyl transferase 1902184 4534486 MSMEG_1826 Mycobacterium smegmatis str. MC2 155 dTDP-RhA:a-D-GlcNAc-diphosphoryl polyprenol, a-3-L-rhamnosyl transferase YP_886197.1 1901315 D 246196 CDS YP_886198.1 118468223 4537038 complement(1903244..1903792) 1 NC_008596.1 identified by match to protein family HMM PF00293; hydrolase, nudix family protein 1903792 4537038 MSMEG_1827 Mycobacterium smegmatis str. MC2 155 hydrolase, nudix family protein YP_886198.1 1903244 R 246196 CDS YP_886199.1 118467479 4536997 complement(1903789..1905153) 1 NC_008596.1 catalyzes the addition of gamma linked glutamate to 7,8-didemethyl-8-hydroxy-5-deazariboflavin coenzyme F420-0); F420-0--gamma-glutamyl ligase 1905153 4536997 MSMEG_1829 Mycobacterium smegmatis str. MC2 155 F420-0--gamma-glutamyl ligase YP_886199.1 1903789 R 246196 CDS YP_886200.1 118469334 4535924 complement(1905150..1906133) 1 NC_008596.1 catalyzes the formation of the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) and GMP from actyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); LPPG:FO 2-phospho-L-lactate transferase 1906133 cofD 4535924 cofD Mycobacterium smegmatis str. MC2 155 LPPG:FO 2-phospho-L-lactate transferase YP_886200.1 1905150 R 246196 CDS YP_886201.1 118472139 4532476 1906425..1906814 1 NC_008596.1 identified by match to protein family HMM PF02467; transcription factor WhiB 1906814 4532476 MSMEG_1831 Mycobacterium smegmatis str. MC2 155 transcription factor WhiB YP_886201.1 1906425 D 246196 CDS YP_886202.1 118473439 4534130 complement(1906855..1907319) 1 NC_008596.1 hypothetical protein 1907319 4534130 MSMEG_1832 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886202.1 1906855 R 246196 CDS YP_886203.1 118471977 4536163 1907407..1907826 1 NC_008596.1 hypothetical protein 1907826 4536163 MSMEG_1833 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886203.1 1907407 D 246196 CDS YP_886204.1 118472721 4531690 1907957..1909375 1 NC_008596.1 converts mannose-6-phosphate to mannose-1-phosphate; the resulting product is then converted to GDP-mannose by ManC which is then used in the synthesis of mannose-containing glycoconjugates that are important for mediating entry into host cells; phosphomannomutase 1909375 manB 4531690 manB Mycobacterium smegmatis str. MC2 155 phosphomannomutase YP_886204.1 1907957 D 246196 CDS YP_886205.1 118469644 4535054 1909372..1910454 1 NC_008596.1 TobH protein 1910454 4535054 MSMEG_1835 Mycobacterium smegmatis str. MC2 155 TobH protein YP_886205.1 1909372 D 246196 CDS YP_886206.1 118468938 4537472 1910546..1911685 1 NC_008596.1 identified by match to protein family HMM PF01238; match to protein family HMM TIGR00218; mannose-6-phosphate isomerase 1911685 manA 4537472 manA Mycobacterium smegmatis str. MC2 155 mannose-6-phosphate isomerase YP_886206.1 1910546 D 246196 CDS YP_886207.1 118471810 4536342 complement(1911718..1913127) 1 NC_008596.1 hypothetical protein 1913127 4536342 MSMEG_1837 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886207.1 1911718 R 246196 CDS YP_886208.1 118470999 4533492 1913166..1914650 1 NC_008596.1 identified by match to protein family HMM PF00324; cationic amino acid transporter 1914650 4533492 MSMEG_1838 Mycobacterium smegmatis str. MC2 155 cationic amino acid transporter YP_886208.1 1913166 D 246196 CDS YP_886209.1 118470321 4535199 1914807..1916039 1 NC_008596.1 identified by match to protein family HMM PF00487; alkane 1-monooxygenase 1916039 4535199 MSMEG_1839 Mycobacterium smegmatis str. MC2 155 alkane 1-monooxygenase YP_886209.1 1914807 D 246196 CDS YP_886210.1 118470183 4530818 1916036..1916209 1 NC_008596.1 identified by match to protein family HMM PF00301; rubredoxin 1916209 4530818 MSMEG_1840 Mycobacterium smegmatis str. MC2 155 rubredoxin YP_886210.1 1916036 D 246196 CDS YP_886211.1 118473312 4535184 1916206..1916388 1 NC_008596.1 identified by match to protein family HMM PF00301; rubredoxin 1916388 4535184 MSMEG_1841 Mycobacterium smegmatis str. MC2 155 rubredoxin YP_886211.1 1916206 D 246196 CDS YP_886212.1 118468884 4536677 1916396..1917121 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1917121 4536677 MSMEG_1842 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886212.1 1916396 D 246196 CDS YP_886213.1 118472752 4531941 complement(1918791..1919315) 1 NC_008596.1 hypothetical protein 1919315 4531941 MSMEG_1844 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886213.1 1918791 R 246196 CDS YP_886214.1 118467359 4534044 complement(1919373..1919999) 1 NC_008596.1 identified by match to protein family HMM PF03458; hypothetical protein 1919999 4534044 MSMEG_1845 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886214.1 1919373 R 246196 CDS YP_886215.1 118471512 4537223 complement(1920009..1921031) 1 NC_008596.1 identified by match to protein family HMM PF03916; polysulfide reductase NrfD 1921031 4537223 MSMEG_1846 Mycobacterium smegmatis str. MC2 155 polysulfide reductase NrfD YP_886215.1 1920009 R 246196 CDS YP_886216.1 118472264 4531573 complement(1921055..1921969) 1 NC_008596.1 identified by match to protein family HMM PF00037; 4Fe-4S ferredoxin 1921969 4531573 MSMEG_1847 Mycobacterium smegmatis str. MC2 155 4Fe-4S ferredoxin YP_886216.1 1921055 R 246196 CDS YP_886217.1 118472690 4531658 complement(1925424..1927136) 1 NC_008596.1 identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM TIGR00475; selenocysteine-specific translation elongation factor 1927136 selB 4531658 selB Mycobacterium smegmatis str. MC2 155 selenocysteine-specific translation elongation factor YP_886217.1 1925424 R 246196 CDS YP_886218.1 118470399 4533460 complement(1927124..1928404) 1 NC_008596.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 1928404 selA 4533460 selA Mycobacterium smegmatis str. MC2 155 selenocysteine synthase YP_886218.1 1927124 R 246196 CDS YP_886219.1 118469594 4531099 1928562..1929554 1 NC_008596.1 identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00476; selenide, water dikinase 1929554 selD 4531099 selD Mycobacterium smegmatis str. MC2 155 selenide, water dikinase YP_886219.1 1928562 D 246196 CDS YP_886220.1 118469354 4533178 1931586..1932791 1 NC_008596.1 identified by match to protein family HMM PF00004; valosin containing protein-1 1932791 4533178 MSMEG_1854 Mycobacterium smegmatis str. MC2 155 valosin containing protein-1 YP_886220.1 1931586 D 246196 CDS YP_886221.1 118471199 4531493 1932788..1933810 1 NC_008596.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 1933810 4531493 MSMEG_1855 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886221.1 1932788 D 246196 CDS YP_886222.1 118473867 4531115 complement(1933836..1934534) 1 NC_008596.1 hypothetical protein 1934534 4531115 MSMEG_1856 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886222.1 1933836 R 246196 CDS YP_886223.1 118473295 4535557 1934812..1936173 1 NC_008596.1 identified by match to protein family HMM PF00665; transposase IstA protein 1936173 4535557 MSMEG_1857 Mycobacterium smegmatis str. MC2 155 transposase IstA protein YP_886223.1 1934812 D 246196 CDS YP_886224.1 118468637 4533569 1936170..1937024 1 NC_008596.1 identified by match to protein family HMM PF01695; transposition helper protein 1937024 4533569 MSMEG_1858 Mycobacterium smegmatis str. MC2 155 transposition helper protein YP_886224.1 1936170 D 246196 CDS YP_886225.1 118469735 4537610 complement(1937032..1937322) 1 NC_008596.1 hypothetical protein 1937322 4537610 MSMEG_1859 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886225.1 1937032 R 246196 CDS YP_886226.1 118470110 4534945 complement(1937342..1937530) 1 NC_008596.1 hypothetical protein 1937530 4534945 MSMEG_1860 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886226.1 1937342 R 246196 CDS YP_886227.1 118471159 4530949 complement(1937660..1938472) 1 NC_008596.1 hypothetical protein 1938472 4530949 MSMEG_1861 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886227.1 1937660 R 246196 CDS YP_886228.1 118473347 4532013 complement(1938555..1939568) 1 NC_008596.1 identified by match to protein family HMM PF00665; transposase 1939568 4532013 MSMEG_1862 Mycobacterium smegmatis str. MC2 155 transposase YP_886228.1 1938555 R 246196 CDS YP_886229.1 118471072 4537515 complement(1939568..1939957) 1 NC_008596.1 transposase 1939957 4537515 MSMEG_1863 Mycobacterium smegmatis str. MC2 155 transposase YP_886229.1 1939568 R 246196 CDS YP_886230.1 118471870 4536246 complement(1940145..1940354) 1 NC_008596.1 transposase 1940354 4536246 MSMEG_1864 Mycobacterium smegmatis str. MC2 155 transposase YP_886230.1 1940145 R 246196 CDS YP_886231.1 118472469 4533835 1940497..1941963 1 NC_008596.1 identified by similarity to GP:2935133; match to protein family HMM PF01609; IS1549, transposase 1941963 4533835 MSMEG_1865 Mycobacterium smegmatis str. MC2 155 IS1549, transposase YP_886231.1 1940497 D 246196 CDS YP_886232.1 118468044 4534158 complement(1942190..1943023) 1 NC_008596.1 identified by match to protein family HMM PF00665; transposase B 1943023 4534158 MSMEG_1866 Mycobacterium smegmatis str. MC2 155 transposase B YP_886232.1 1942190 R 246196 CDS YP_886233.1 118468656 4535232 complement(1943053..1943334) 1 NC_008596.1 identified by match to protein family HMM PF01527; transposase 1943334 4535232 MSMEG_1867 Mycobacterium smegmatis str. MC2 155 transposase YP_886233.1 1943053 R 246196 CDS YP_886234.1 118470942 4533677 complement(1943545..1943838) 1 NC_008596.1 hypothetical protein 1943838 4533677 MSMEG_1868 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886234.1 1943545 R 246196 CDS YP_886235.1 118471899 4536236 complement(1943875..1944624) 1 NC_008596.1 hypothetical protein 1944624 4536236 MSMEG_1869 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886235.1 1943875 R 246196 CDS YP_886236.1 118467661 4535009 complement(1944699..1948496) 1 NC_008596.1 hypothetical protein 1948496 4535009 MSMEG_1870 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886236.1 1944699 R 246196 CDS YP_886237.1 118473642 4533510 complement(1948496..1948774) 1 NC_008596.1 hypothetical protein 1948774 4533510 MSMEG_1871 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886237.1 1948496 R 246196 CDS YP_886238.1 118472978 4532258 complement(1948794..1949663) 1 NC_008596.1 identified by match to protein family HMM PF06013; hypothetical protein 1949663 4532258 MSMEG_1872 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886238.1 1948794 R 246196 CDS YP_886239.1 118468484 4537673 1949753..1950385 1 NC_008596.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 1950385 4537673 MSMEG_1873 Mycobacterium smegmatis str. MC2 155 thymidylate kinase YP_886239.1 1949753 D 246196 CDS YP_886240.1 118467592 4531408 1950437..1951123 1 NC_008596.1 identified by similarity to SP:Q50447; match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator MtrA 1951123 mtrA 4531408 mtrA Mycobacterium smegmatis str. MC2 155 DNA-binding response regulator MtrA YP_886240.1 1950437 D 246196 CDS YP_886241.1 118472967 4532306 1951266..1952852 1 NC_008596.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase MtrB 1952852 4532306 MSMEG_1875 Mycobacterium smegmatis str. MC2 155 sensor histidine kinase MtrB YP_886241.1 1951266 D 246196 CDS YP_886242.1 118469987 4533110 1952849..1954606 1 NC_008596.1 lipoprotein LpqB 1954606 4533110 MSMEG_1876 Mycobacterium smegmatis str. MC2 155 lipoprotein LpqB YP_886242.1 1952849 D 246196 CDS YP_886243.1 118474033 4533446 1954646..1955299 1 NC_008596.1 hypothetical protein 1955299 4533446 MSMEG_1877 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886243.1 1954646 D 246196 CDS YP_886244.1 118473146 4532586 1955596..1956288 1 NC_008596.1 identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; S30AE family protein 1956288 4532586 MSMEG_1878 Mycobacterium smegmatis str. MC2 155 S30AE family protein YP_886244.1 1955596 D 246196 CDS YP_886245.1 118470461 4534524 complement(1956363..1956488) 1 NC_008596.1 hypothetical protein 1956488 4534524 MSMEG_1879 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886245.1 1956363 R 246196 CDS YP_886246.1 118471837 4536291 1956525..1959386 1 NC_008596.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 1959386 secA 4536291 secA Mycobacterium smegmatis str. MC2 155 preprotein translocase subunit SecA YP_886246.1 1956525 D 246196 CDS YP_886247.1 118469426 4534322 complement(1959383..1959925) 1 NC_008596.1 hypothetical protein 1959925 4534322 MSMEG_1880 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886247.1 1959383 R 246196 CDS YP_886248.1 118467488 4537006 1960095..1961504 1 NC_008596.1 identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; acyltransferase 1961504 4537006 MSMEG_1882 Mycobacterium smegmatis str. MC2 155 acyltransferase YP_886248.1 1960095 D 246196 CDS YP_886249.1 118468508 4535489 1961567..1963423 1 NC_008596.1 identified by match to protein family HMM PF02028; match to protein family HMM TIGR00842; glycine betaine transporter OpuD 1963423 4535489 MSMEG_1883 Mycobacterium smegmatis str. MC2 155 glycine betaine transporter OpuD YP_886249.1 1961567 D 246196 CDS YP_886250.1 118469211 4533265 1963433..1963930 1 NC_008596.1 hypothetical protein 1963930 4533265 MSMEG_1884 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886250.1 1963433 D 246196 CDS YP_886251.1 118472582 4534362 1963982..1965133 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; 2Fe-2S iron-sulfur cluster binding domain-containing protein 1965133 4534362 MSMEG_1885 Mycobacterium smegmatis str. MC2 155 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_886251.1 1963982 D 246196 CDS YP_886252.1 118473967 4533038 1965203..1966459 1 NC_008596.1 identified by match to protein family HMM PF00487; Fatty acid desaturase 1966459 4533038 MSMEG_1886 Mycobacterium smegmatis str. MC2 155 Fatty acid desaturase YP_886252.1 1965203 D 246196 CDS YP_886253.1 118468726 4532796 1966654..1967082 1 NC_008596.1 hypothetical protein 1967082 4532796 MSMEG_1887 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886253.1 1966654 D 246196 CDS YP_886254.1 118469497 4533324 complement(1967099..1968031) 1 NC_008596.1 identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; methyltransferase 1968031 4533324 MSMEG_1888 Mycobacterium smegmatis str. MC2 155 methyltransferase YP_886254.1 1967099 R 246196 CDS YP_886255.1 118469007 4536057 complement(1968124..1969131) 1 NC_008596.1 identified by match to protein family HMM PF03193; ribosome small subunit-dependent GTPase RsgA 1969131 4536057 MSMEG_1889 Mycobacterium smegmatis str. MC2 155 ribosome small subunit-dependent GTPase RsgA YP_886255.1 1968124 R 246196 CDS YP_886256.1 118470357 4534632 complement(1969128..1970459) 1 NC_008596.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1970459 aroA 4534632 aroA Mycobacterium smegmatis str. MC2 155 3-phosphoshikimate 1-carboxyvinyltransferase YP_886256.1 1969128 R 246196 CDS YP_886257.1 118470876 4536808 1970515..1971303 1 NC_008596.1 identified by match to protein family HMM PF02586; hypothetical protein 1971303 4536808 MSMEG_1891 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886257.1 1970515 D 246196 CDS YP_886258.1 118473287 4535549 1971300..1972799 1 NC_008596.1 identified by match to protein family HMM PF05175; transferase 1972799 4535549 MSMEG_1892 Mycobacterium smegmatis str. MC2 155 transferase YP_886258.1 1971300 D 246196 CDS YP_886259.1 118472540 4532666 complement(1972807..1973613) 1 NC_008596.1 UbiE/COQ5 methyltransferase 1973613 4532666 MSMEG_1893 Mycobacterium smegmatis str. MC2 155 UbiE/COQ5 methyltransferase YP_886259.1 1972807 R 246196 CDS YP_886260.1 118467444 4535453 complement(1973653..1974519) 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 1974519 4535453 MSMEG_1894 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_886260.1 1973653 R 246196 CDS YP_886261.1 118469574 4531448 complement(1974521..1975435) 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; HTH-type transcriptional regulator AlsR 1975435 4531448 MSMEG_1895 Mycobacterium smegmatis str. MC2 155 HTH-type transcriptional regulator AlsR YP_886261.1 1974521 R 246196 CDS YP_886262.1 118469356 4533180 1975509..1976741 1 NC_008596.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1976741 4533180 MSMEG_1896 Mycobacterium smegmatis str. MC2 155 acetyl-CoA acetyltransferase YP_886262.1 1975509 D 246196 CDS YP_886263.1 118467764 4533395 1976738..1977514 1 NC_008596.1 identified by match to protein family HMM PF00561; match to protein family HMM TIGR02427; 3-oxoadipate enol-lactonase 1977514 pcaD 4533395 pcaD Mycobacterium smegmatis str. MC2 155 3-oxoadipate enol-lactonase YP_886263.1 1976738 D 246196 CDS YP_886264.1 118470565 4531508 1977511..1978308 1 NC_008596.1 identified by match to protein family HMM PF01144; match to protein family HMM TIGR02429; succinyl-CoA:3-ketoacid-coenzyme A transferase 1 1978308 4531508 MSMEG_1898 Mycobacterium smegmatis str. MC2 155 succinyl-CoA:3-ketoacid-coenzyme A transferase 1 YP_886264.1 1977511 D 246196 CDS YP_886265.1 118467668 4536934 1978305..1978955 1 NC_008596.1 identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428; succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B 1978955 4536934 MSMEG_1899 Mycobacterium smegmatis str. MC2 155 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B YP_886265.1 1978305 D 246196 CDS YP_886266.1 118472948 4531765 complement(1978960..1979517) 1 NC_008596.1 identified by match to protein family HMM PF02557; D-alanyl-D-alanine carboxypeptidase 1979517 4531765 MSMEG_1900 Mycobacterium smegmatis str. MC2 155 D-alanyl-D-alanine carboxypeptidase YP_886266.1 1978960 R 246196 CDS YP_886267.1 118473710 4533258 complement(1979558..1982224) 1 NC_008596.1 identified by match to protein family HMM PF00196; match to protein family HMM PF07721; DNA-binding HTH domain-containing protein 1982224 4533258 MSMEG_1901 Mycobacterium smegmatis str. MC2 155 DNA-binding HTH domain-containing protein YP_886267.1 1979558 R 246196 CDS YP_886268.1 118470744 4533296 complement(1982232..1983185) 1 NC_008596.1 identified by match to protein family HMM PF00126; transcriptional regulator 1983185 4533296 MSMEG_1902 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_886268.1 1982232 R 246196 CDS YP_886269.1 118472187 4533725 complement(1983261..1985660) 1 NC_008596.1 identified by match to protein family HMM PF02515; caib/baif family protein 1985660 4533725 MSMEG_1903 Mycobacterium smegmatis str. MC2 155 caib/baif family protein YP_886269.1 1983261 R 246196 CDS YP_886270.1 118471480 4531881 complement(1985666..1986859) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 1986859 4531881 MSMEG_1904 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_886270.1 1985666 R 246196 CDS YP_886271.1 118469027 4530879 complement(1986861..1987976) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02771; acyl-CoA dehydrogenase 1987976 4530879 MSMEG_1905 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_886271.1 1986861 R 246196 CDS YP_886272.1 118470496 4537180 complement(1988141..1990903) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF07729; match to protein family HMM PF08021; toluate 1,2-dioxygenase electron transfer component 1990903 4537180 MSMEG_1906 Mycobacterium smegmatis str. MC2 155 toluate 1,2-dioxygenase electron transfer component YP_886272.1 1988141 R 246196 CDS YP_886273.1 118470593 4531380 complement(1990913..1991428) 1 NC_008596.1 identified by match to protein family HMM PF00866; toluate 1,2-dioxygenase subunit beta 1991428 4531380 MSMEG_1907 Mycobacterium smegmatis str. MC2 155 toluate 1,2-dioxygenase subunit beta YP_886273.1 1990913 R 246196 CDS YP_886274.1 118472516 4533746 complement(1991430..1992794) 1 NC_008596.1 identified by match to protein family HMM PF00355; match to protein family HMM PF00848; benzoate 1,2-dioxygenase subunit alpha 1992794 4533746 MSMEG_1908 Mycobacterium smegmatis str. MC2 155 benzoate 1,2-dioxygenase subunit alpha YP_886274.1 1991430 R 246196 CDS YP_886275.1 118468666 4535242 1993004..1993930 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; HTH-type transcriptional regulator YnfL 1993930 4535242 MSMEG_1909 Mycobacterium smegmatis str. MC2 155 HTH-type transcriptional regulator YnfL YP_886275.1 1993004 D 246196 CDS YP_886276.1 118470554 4533008 1993927..1995030 1 NC_008596.1 identified by match to protein family HMM PF01188; match to protein family HMM PF02746; muconate cycloisomerase 1995030 4533008 MSMEG_1910 Mycobacterium smegmatis str. MC2 155 muconate cycloisomerase YP_886276.1 1993927 D 246196 CDS YP_886277.1 118473469 4531171 1995064..1995957 1 NC_008596.1 identified by match to protein family HMM PF00775; match to protein family HMM PF04444; match to protein family HMM TIGR02438; catechol 1,2-dioxygenase 1995957 catA 4531171 catA Mycobacterium smegmatis str. MC2 155 catechol 1,2-dioxygenase YP_886277.1 1995064 D 246196 CDS YP_886278.1 118471569 4534431 1995965..1996249 1 NC_008596.1 identified by match to protein family HMM PF02426; muconolactone delta-isomerase 1 1996249 4534431 MSMEG_1912 Mycobacterium smegmatis str. MC2 155 muconolactone delta-isomerase 1 YP_886278.1 1995965 D 246196 CDS YP_886279.1 118470403 4533464 complement(1996254..1996745) 1 NC_008596.1 identified by match to protein family HMM PF04073; match to protein family HMM TIGR00011; hypothetical protein 1996745 ybaK 4533464 ybaK Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886279.1 1996254 R 246196 CDS YP_886280.1 118469630 4534089 1997014..1997673 1 NC_008596.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02947; RNA polymerase sigma-70 factor, family protein 1997673 4534089 MSMEG_1914 Mycobacterium smegmatis str. MC2 155 RNA polymerase sigma-70 factor, family protein YP_886280.1 1997014 D 246196 CDS YP_886281.1 118467967 4535149 1997670..1997975 1 NC_008596.1 identified by match to protein family HMM TIGR02949; anti-sigma factor, family protein 1997975 4535149 MSMEG_1915 Mycobacterium smegmatis str. MC2 155 anti-sigma factor, family protein YP_886281.1 1997670 D 246196 CDS YP_886282.1 118470866 4536798 complement(1997988..1998062) 1 NC_008596.1 hypothetical protein 1998062 4536798 MSMEG_1916 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886282.1 1997988 R 246196 CDS YP_886283.1 118473734 4537339 1998180..1998401 1 NC_008596.1 identified by match to protein family HMM PF00364; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 1998401 4537339 MSMEG_1917 Mycobacterium smegmatis str. MC2 155 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_886283.1 1998180 D 246196 CDS YP_886284.1 118468520 4535345 1998476..1999975 1 NC_008596.1 identified by match to protein family HMM PF02518; match to protein family HMM PF07568; sensor histidine kinase 1999975 4535345 MSMEG_1918 Mycobacterium smegmatis str. MC2 155 sensor histidine kinase YP_886284.1 1998476 D 246196 CDS YP_886285.1 118471404 4534879 complement(2000143..2000397) 1 NC_008596.1 identified by match to protein family HMM PF02467; transcription factor WhiB 2000397 4534879 MSMEG_1919 Mycobacterium smegmatis str. MC2 155 transcription factor WhiB YP_886285.1 2000143 R 246196 CDS YP_886286.1 118472397 4531807 complement(2000646..2001608) 1 NC_008596.1 identified by match to protein family HMM PF00781; diacylglycerol kinase catalytic subunit 2001608 4531807 MSMEG_1920 Mycobacterium smegmatis str. MC2 155 diacylglycerol kinase catalytic subunit YP_886286.1 2000646 R 246196 CDS YP_886287.1 118468072 4533019 complement(2001654..2002043) 1 NC_008596.1 identified by match to protein family HMM PF02810; SecC motif-containing protein 2002043 4533019 MSMEG_1921 Mycobacterium smegmatis str. MC2 155 SecC motif-containing protein YP_886287.1 2001654 R 246196 CDS YP_886288.1 118469396 4532290 2002144..2002581 1 NC_008596.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 2002581 aroQ 4532290 aroQ Mycobacterium smegmatis str. MC2 155 3-dehydroquinate dehydratase YP_886288.1 2002144 D 246196 CDS YP_886289.1 118471117 4533476 2002578..2002958 1 NC_008596.1 membrane protein 2002958 4533476 MSMEG_1923 Mycobacterium smegmatis str. MC2 155 membrane protein YP_886289.1 2002578 D 246196 CDS YP_886290.1 118472565 4534149 complement(2002965..2003444) 1 NC_008596.1 identified by match to protein family HMM PF00583; N-acetyltransferase Ats1 2003444 4534149 MSMEG_1924 Mycobacterium smegmatis str. MC2 155 N-acetyltransferase Ats1 YP_886290.1 2002965 R 246196 CDS YP_886291.1 118467514 4535525 complement(2003441..2004532) 1 NC_008596.1 identified by match to protein family HMM PF00425; match to protein family HMM TIGR00543; isochorismate synthase DhbC 2004532 4535525 MSMEG_1925 Mycobacterium smegmatis str. MC2 155 isochorismate synthase DhbC YP_886291.1 2003441 R 246196 CDS YP_886292.1 118469838 4532729 complement(2004529..2005140) 1 NC_008596.1 forms a homodimer in Mycobacterium tuberculosis; belongs to the dPGM superfamily; acid phosphatase 2005140 4532729 MSMEG_1926 Mycobacterium smegmatis str. MC2 155 acid phosphatase YP_886292.1 2004529 R 246196 CDS YP_886293.1 118467510 4535521 2005199..2005996 1 NC_008596.1 identified by match to protein family HMM PF01656; cobyrinic acid a,c-diamide synthase 2005996 4535521 MSMEG_1927 Mycobacterium smegmatis str. MC2 155 cobyrinic acid a,c-diamide synthase YP_886293.1 2005199 D 246196 CDS YP_886294.1 118473762 4537738 2006011..2006712 1 NC_008596.1 identified by match to protein family HMM PF00481; regulatory protein 2006712 4537738 MSMEG_1928 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_886294.1 2006011 D 246196 CDS YP_886295.1 118472510 4533740 complement(2006724..2007941) 1 NC_008596.1 hypothetical protein 2007941 4533740 MSMEG_1929 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886295.1 2006724 R 246196 CDS YP_886296.1 118469425 4534321 complement(2007957..2009465) 1 NC_008596.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; DEAD/DEAH box helicase 2009465 4534321 MSMEG_1930 Mycobacterium smegmatis str. MC2 155 DEAD/DEAH box helicase YP_886296.1 2007957 R 246196 CDS YP_886297.1 118470446 4534509 2009771..2010469 1 NC_008596.1 hypothetical protein 2010469 4534509 MSMEG_1931 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886297.1 2009771 D 246196 CDS YP_886298.1 118472705 4531673 2010381..2010563 1 NC_008596.1 hypothetical protein 2010563 4531673 MSMEG_1933 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886298.1 2010381 D 246196 CDS YP_886299.1 118470889 4537194 complement(2010476..2011300) 1 NC_008596.1 MmpS3 protein 2011300 4537194 MSMEG_1932 Mycobacterium smegmatis str. MC2 155 MmpS3 protein YP_886299.1 2010476 R 246196 CDS YP_886300.1 118473381 4536626 2011602..2011841 1 NC_008596.1 ATP-binding protein 2011841 4536626 MSMEG_1934 Mycobacterium smegmatis str. MC2 155 ATP-binding protein YP_886300.1 2011602 D 246196 CDS YP_886301.1 118470500 4537552 complement(2011850..2012509) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2012509 4537552 MSMEG_1935 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886301.1 2011850 R 246196 CDS YP_886302.1 118469549 4537495 2012755..2013789 1 NC_008596.1 hypothetical protein 2013789 4537495 MSMEG_1936 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886302.1 2012755 D 246196 CDS YP_886303.1 118467494 4537381 2013931..2015121 1 NC_008596.1 The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2,6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation; molybdopterin biosynthesis-like protein MoeZ 2015121 4537381 MSMEG_1937 Mycobacterium smegmatis str. MC2 155 molybdopterin biosynthesis-like protein MoeZ YP_886303.1 2013931 D 246196 CDS YP_886304.1 118471778 4536349 2015158..2016012 1 NC_008596.1 identified by match to protein family HMM TIGR02569; hypothetical protein 2016012 4536349 MSMEG_1938 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886304.1 2015158 D 246196 CDS YP_886305.1 118472816 4536670 complement(2016090..2016386) 1 NC_008596.1 identified by match to protein family HMM PF01035; 6-O-methylguanine DNA methyltransferase 2016386 4536670 MSMEG_1939 Mycobacterium smegmatis str. MC2 155 6-O-methylguanine DNA methyltransferase YP_886305.1 2016090 R 246196 CDS YP_886306.1 118469874 4536566 complement(2016388..2017149) 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 2017149 4536566 MSMEG_1940 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_886306.1 2016388 R 246196 CDS YP_886307.1 118470846 4534301 2017285..2020422 1 NC_008596.1 identified by match to protein family HMM PF00580; helicase, UvrD/Rep family protein 2020422 4534301 MSMEG_1941 Mycobacterium smegmatis str. MC2 155 helicase, UvrD/Rep family protein YP_886307.1 2017285 D 246196 CDS YP_886308.1 118472301 4532773 2020443..2023706 1 NC_008596.1 identified by match to protein family HMM PF00580; ATP-dependent DNA helicase 2023706 4532773 MSMEG_1943 Mycobacterium smegmatis str. MC2 155 ATP-dependent DNA helicase YP_886308.1 2020443 D 246196 CDS YP_886309.1 118473496 4532129 complement(2023699..2024412) 1 NC_008596.1 identified by match to protein family HMM PF01988; integral membrane protein 2024412 4532129 MSMEG_1942 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_886309.1 2023699 R 246196 CDS YP_886310.1 118467619 4533081 complement(2024543..2024932) 1 NC_008596.1 membrane protein 2024932 4533081 MSMEG_1944 Mycobacterium smegmatis str. MC2 155 membrane protein YP_886310.1 2024543 R 246196 CDS YP_886311.1 118469713 4537218 2025002..2026096 1 NC_008596.1 identified by match to protein family HMM PF02254; match to protein family HMM PF07885; ion channel membrane protein 2026096 4537218 MSMEG_1945 Mycobacterium smegmatis str. MC2 155 ion channel membrane protein YP_886311.1 2025002 D 246196 CDS YP_886312.1 118470688 4531751 2026093..2027028 1 NC_008596.1 can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase 2027028 nudC 4531751 nudC Mycobacterium smegmatis str. MC2 155 NADH pyrophosphatase YP_886312.1 2026093 D 246196 CDS YP_886313.1 118473244 4537304 complement(2027051..2027299) 1 NC_008596.1 identified by match to protein family HMM PF00462; match to protein family HMM TIGR02200; hypothetical protein 2027299 4537304 MSMEG_1947 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886313.1 2027051 R 246196 CDS YP_886314.1 118468851 4535624 complement(2027434..2027625) 1 NC_008596.1 hypothetical protein 2027625 4535624 MSMEG_1948 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886314.1 2027434 R 246196 CDS YP_886315.1 118469277 4532247 2027614..2027757 1 NC_008596.1 hypothetical protein 2027757 4532247 MSMEG_1949 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886315.1 2027614 D 246196 CDS YP_886316.1 118472913 4533782 2027837..2028406 1 NC_008596.1 identified by match to protein family HMM PF05532; hypothetical protein 2028406 4533782 MSMEG_1950 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886316.1 2027837 D 246196 CDS YP_886317.1 118470303 4533361 2028409..2029071 1 NC_008596.1 hypothetical protein 2029071 4533361 MSMEG_1951 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886317.1 2028409 D 246196 CDS YP_886318.1 118469673 4535435 2029125..2031275 1 NC_008596.1 identified by match to protein family HMM PF00570; match to protein family HMM PF00580; ATP-dependent DNA helicase 2031275 4535435 MSMEG_1952 Mycobacterium smegmatis str. MC2 155 ATP-dependent DNA helicase YP_886318.1 2029125 D 246196 CDS YP_886319.1 118470605 4532108 2031777..2032088 1 NC_008596.1 identified by match to protein family HMM PF02467; transcription factor WhiB 2032088 4532108 MSMEG_1953 Mycobacterium smegmatis str. MC2 155 transcription factor WhiB YP_886319.1 2031777 D 246196 CDS YP_886320.1 118468814 4534070 complement(2032190..2033509) 1 NC_008596.1 identified by match to protein family HMM PF03109; ABC transporter 2033509 4534070 MSMEG_1954 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_886320.1 2032190 R 246196 CDS YP_886321.1 118468344 4532095 2033351..2033593 1 NC_008596.1 hypothetical protein 2033593 4532095 MSMEG_1956 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886321.1 2033351 D 246196 CDS YP_886322.1 118472615 4537265 complement(2033567..2034406) 1 NC_008596.1 hypothetical protein 2034406 4537265 MSMEG_1955 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886322.1 2033567 R 246196 CDS YP_886323.1 118468686 4535909 complement(2034464..2035873) 1 NC_008596.1 hypothetical protein 2035873 4535909 MSMEG_1957 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886323.1 2034464 R 246196 CDS YP_886324.1 118472005 4533606 2035981..2037018 1 NC_008596.1 PDZ domain-containing protein 2037018 4533606 MSMEG_1958 Mycobacterium smegmatis str. MC2 155 PDZ domain-containing protein YP_886324.1 2035981 D 246196 CDS YP_886325.1 118467503 4537390 2037115..2040126 1 NC_008596.1 identified by match to protein family HMM PF03699; hypothetical protein 2040126 4537390 MSMEG_1959 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886325.1 2037115 D 246196 CDS YP_886326.1 118470596 4532098 2040307..2040828 1 NC_008596.1 hypothetical protein 2040828 4532098 MSMEG_1960 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886326.1 2040307 D 246196 CDS YP_886327.1 118468276 4535763 2040821..2041996 1 NC_008596.1 hypothetical protein 2041996 4535763 MSMEG_1961 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886327.1 2040821 D 246196 CDS YP_886328.1 118473711 4533259 2041993..2042538 1 NC_008596.1 hypothetical protein 2042538 4533259 MSMEG_1962 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886328.1 2041993 D 246196 CDS YP_886329.1 118470329 4534912 2042589..2045987 1 NC_008596.1 identified by match to protein family HMM PF00486; match to protein family HMM PF03704; transcriptional regulatory protein 2045987 4534912 MSMEG_1963 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_886329.1 2042589 D 246196 CDS YP_886330.1 118468404 4534546 2046110..2047510 1 NC_008596.1 identified by match to protein family HMM PF01565; mitomycin radical oxidase 2047510 4534546 MSMEG_1964 Mycobacterium smegmatis str. MC2 155 mitomycin radical oxidase YP_886330.1 2046110 D 246196 CDS YP_886331.1 118471432 4532815 complement(2048141..2048551) 1 NC_008596.1 hypothetical protein 2048551 4532815 MSMEG_1966 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886331.1 2048141 R 246196 CDS YP_886332.1 118470470 4536779 2048646..2049275 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2049275 4536779 MSMEG_1967 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886332.1 2048646 D 246196 CDS YP_886333.1 118469949 4530912 complement(2049610..2050320) 1 NC_008596.1 identified by match to protein family HMM PF00106; oxidoreductase 2050320 4530912 MSMEG_1968 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_886333.1 2049610 R 246196 CDS YP_886334.1 118471970 4536156 2050405..2050770 1 NC_008596.1 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 2050770 4536156 MSMEG_1969 Mycobacterium smegmatis str. MC2 155 MerR family transcriptional regulator YP_886334.1 2050405 D 246196 CDS YP_886335.1 118473131 4531192 complement(2050786..2052537) 1 NC_008596.1 identified by match to protein family HMM PF01590; match to protein family HMM PF02954; sigma factor 2052537 4531192 MSMEG_1970 Mycobacterium smegmatis str. MC2 155 sigma factor YP_886335.1 2050786 R 246196 CDS YP_886336.1 118473521 4533884 2052753..2054381 1 NC_008596.1 identified by match to protein family HMM PF02332; propane monooxygenase hydroxylase large subunit 2054381 4533884 MSMEG_1971 Mycobacterium smegmatis str. MC2 155 propane monooxygenase hydroxylase large subunit YP_886336.1 2052753 D 246196 CDS YP_886337.1 118467893 4531249 2054473..2055519 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; methane monooxygenase component C 2055519 4531249 MSMEG_1972 Mycobacterium smegmatis str. MC2 155 methane monooxygenase component C YP_886337.1 2054473 D 246196 CDS YP_886338.1 118471408 4534884 2056647..2056991 1 NC_008596.1 propane monooxygenase coupling protein 2056991 4534884 MSMEG_1974 Mycobacterium smegmatis str. MC2 155 propane monooxygenase coupling protein YP_886338.1 2056647 D 246196 CDS YP_886339.1 118472969 4532308 2057028..2058071 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 2058071 4532308 MSMEG_1975 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_886339.1 2057028 D 246196 CDS YP_886340.1 118468570 4533705 2058068..2058811 1 NC_008596.1 identified by match to protein family HMM PF01883; hypothetical protein 2058811 4533705 MSMEG_1976 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886340.1 2058068 D 246196 CDS YP_886341.1 118470082 4532957 2058811..2059836 1 NC_008596.1 identified by match to protein family HMM PF00107; alcohol dehydrogenase 2059836 4532957 MSMEG_1977 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_886341.1 2058811 D 246196 CDS YP_886342.1 118473326 4530985 2059864..2061513 1 NC_008596.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; the rhizobia and high GC gram-positive bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the R. leguminosarum protein in this cluster is transcribed under anaerobic conditions and is not necessary for growth; molecular chaperone GroEL 2061513 groEL 4530985 groEL Mycobacterium smegmatis str. MC2 155 molecular chaperone GroEL YP_886342.1 2059864 D 246196 CDS YP_886343.1 118470578 4531365 2061539..2061880 1 NC_008596.1 identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase 2061880 4531365 MSMEG_1979 Mycobacterium smegmatis str. MC2 155 antibiotic biosynthesis monooxygenase YP_886343.1 2061539 D 246196 CDS YP_886344.1 118471301 4532195 complement(2061887..2063062) 1 NC_008596.1 identified by match to protein family HMM PF01494; hypothetical protein 2063062 4532195 MSMEG_1980 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886344.1 2061887 R 246196 CDS YP_886345.1 118468680 4535903 complement(2063059..2063547) 1 NC_008596.1 identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 2063547 4535903 MSMEG_1981 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886345.1 2063059 R 246196 CDS YP_886346.1 118470199 4532493 2063768..2065315 1 NC_008596.1 identified by match to protein family HMM PF00501; acyl-CoA synthetase 2065315 4532493 MSMEG_1982 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_886346.1 2063768 D 246196 CDS YP_886347.1 118473714 4536948 complement(2065325..2066677) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family protein transporter 2066677 4536948 MSMEG_1983 Mycobacterium smegmatis str. MC2 155 major facilitator family protein transporter YP_886347.1 2065325 R 246196 CDS YP_886348.1 118467914 4532647 complement(2066756..2067646) 1 NC_008596.1 identified by match to protein family HMM PF00561; haloacetate dehalogenase H-1 2067646 4532647 MSMEG_1984 Mycobacterium smegmatis str. MC2 155 haloacetate dehalogenase H-1 YP_886348.1 2066756 R 246196 CDS YP_886349.1 118472966 4532305 2067763..2068695 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 2068695 4532305 MSMEG_1985 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_886349.1 2067763 D 246196 CDS YP_886350.1 118470792 4536076 2068955..2070055 1 NC_008596.1 identified by similarity to SP:Q51945; match to protein family HMM PF00180; match to protein family HMM TIGR02089; tartrate dehydrogenase 2070055 4536076 MSMEG_1986 Mycobacterium smegmatis str. MC2 155 tartrate dehydrogenase YP_886350.1 2068955 D 246196 CDS YP_886351.1 118470948 4533684 2070195..2070575 1 NC_008596.1 hypothetical protein 2070575 4533684 MSMEG_1987 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886351.1 2070195 D 246196 CDS YP_886352.1 118467986 4531306 2070610..2071146 1 NC_008596.1 hypothetical protein 2071146 4531306 MSMEG_1988 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886352.1 2070610 D 246196 CDS YP_886353.1 118471654 4536491 2071147..2072145 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; phenoxybenzoate dioxygenase subunit beta 2072145 4536491 MSMEG_1989 Mycobacterium smegmatis str. MC2 155 phenoxybenzoate dioxygenase subunit beta YP_886353.1 2071147 D 246196 CDS YP_886354.1 118473481 4531185 2072174..2073247 1 NC_008596.1 hypothetical protein 2073247 4531185 MSMEG_1990 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886354.1 2072174 D 246196 CDS YP_886355.1 118471487 4531888 2073322..2074476 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; isovaleryl-CoA dehydrogenase 2074476 4531888 MSMEG_1991 Mycobacterium smegmatis str. MC2 155 isovaleryl-CoA dehydrogenase YP_886355.1 2073322 D 246196 CDS YP_886356.1 118474027 4533440 2074476..2075642 1 NC_008596.1 identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F 2075642 4533440 MSMEG_1992 Mycobacterium smegmatis str. MC2 155 L-carnitine dehydratase/bile acid-inducible protein F YP_886356.1 2074476 D 246196 CDS YP_886357.1 118471974 4536160 2075672..2076505 1 NC_008596.1 identified by match to protein family HMM PF01575; MaoC like domain-containing protein 2076505 4536160 MSMEG_1993 Mycobacterium smegmatis str. MC2 155 MaoC like domain-containing protein YP_886357.1 2075672 D 246196 CDS YP_886358.1 118469307 4533372 2076502..2076633 1 NC_008596.1 HpcH/HpaI aldolase 2076633 4533372 MSMEG_1994 Mycobacterium smegmatis str. MC2 155 HpcH/HpaI aldolase YP_886358.1 2076502 D 246196 CDS YP_886359.1 118467406 4535828 complement(2076671..2077354) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptional regulator MdcY family protein 2077354 4535828 MSMEG_1995 Mycobacterium smegmatis str. MC2 155 transcriptional regulator MdcY family protein YP_886359.1 2076671 R 246196 CDS YP_886360.1 118468321 4533800 2077513..2078376 1 NC_008596.1 identified by match to protein family HMM PF00296; N5,N10- methylenetetrahydromethanopterin reductase-related protein 2078376 4533800 MSMEG_1996 Mycobacterium smegmatis str. MC2 155 N5,N10- methylenetetrahydromethanopterin reductase-related protein YP_886360.1 2077513 D 246196 CDS YP_886361.1 118471513 4537224 2078514..2080274 1 NC_008596.1 N-acyl-D-glutamate amidohydrolase 2080274 4537224 MSMEG_1997 Mycobacterium smegmatis str. MC2 155 N-acyl-D-glutamate amidohydrolase YP_886361.1 2078514 D 246196 CDS YP_886362.1 118471140 4531827 2080271..2081164 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 2081164 4531827 MSMEG_1998 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_886362.1 2080271 D 246196 CDS YP_886363.1 118473917 4536983 complement(2081235..2081378) 1 NC_008596.1 hypothetical protein 2081378 4536983 MSMEG_1999 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886363.1 2081235 R 246196 CDS YP_886364.1 118470432 4532223 complement(2081621..2082070) 1 NC_008596.1 hypothetical protein 2082070 4532223 MSMEG_2000 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886364.1 2081621 R 246196 CDS YP_886365.1 118468580 4532707 complement(2082169..2082831) 1 NC_008596.1 identified by match to protein family HMM PF00083; sugar transporter 2082831 4532707 MSMEG_2001 Mycobacterium smegmatis str. MC2 155 sugar transporter YP_886365.1 2082169 R 246196 CDS YP_886366.1 118471988 4536135 2082987..2083688 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 2083688 4536135 MSMEG_2002 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_886366.1 2082987 D 246196 CDS YP_886367.1 118469494 4533320 complement(2083696..2085018) 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 2085018 4533320 MSMEG_2003 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_886367.1 2083696 R 246196 CDS YP_886368.1 118467972 4535154 complement(2085076..2085840) 1 NC_008596.1 arabinose-proton symporter 2085840 4535154 MSMEG_2004 Mycobacterium smegmatis str. MC2 155 arabinose-proton symporter YP_886368.1 2085076 R 246196 CDS YP_886369.1 118473124 4531851 complement(2085866..2086792) 1 NC_008596.1 identified by match to protein family HMM PF01261; sugar phosphate isomerase/epimerase 2086792 4531851 MSMEG_2005 Mycobacterium smegmatis str. MC2 155 sugar phosphate isomerase/epimerase YP_886369.1 2085866 R 246196 CDS YP_886370.1 118469700 4537205 complement(2086952..2087875) 1 NC_008596.1 identified by match to protein family HMM PF00903; 2,3-dihydroxybiphenyl 1,2-dioxygenase 2087875 4537205 MSMEG_2006 Mycobacterium smegmatis str. MC2 155 2,3-dihydroxybiphenyl 1,2-dioxygenase YP_886370.1 2086952 R 246196 CDS YP_886371.1 118470665 4534674 complement(2087878..2088741) 1 NC_008596.1 identified by match to protein family HMM PF01557; HpcE protein 2088741 4534674 MSMEG_2007 Mycobacterium smegmatis str. MC2 155 HpcE protein YP_886371.1 2087878 R 246196 CDS YP_886372.1 118470762 4533665 2088661..2088927 1 NC_008596.1 hypothetical protein 2088927 4533665 MSMEG_2008 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886372.1 2088661 D 246196 CDS YP_886373.1 118471725 4536411 2088924..2089604 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 2089604 4536411 MSMEG_2009 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_886373.1 2088924 D 246196 CDS YP_886374.1 118468411 4534553 complement(2089639..2089956) 1 NC_008596.1 identified by match to protein family HMM PF07876; stress responsive A/B barrel domain superfamily protein 2089956 4534553 MSMEG_2010 Mycobacterium smegmatis str. MC2 155 stress responsive A/B barrel domain superfamily protein YP_886374.1 2089639 R 246196 CDS YP_886375.1 118472657 4535077 complement(2090102..2091106) 1 NC_008596.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 2091106 4535077 MSMEG_2011 Mycobacterium smegmatis str. MC2 155 LacI family transcriptional regulator YP_886375.1 2090102 R 246196 CDS YP_886376.1 118468103 4535601 2091191..2092510 1 NC_008596.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 2092510 hisD 4535601 hisD Mycobacterium smegmatis str. MC2 155 histidinol dehydrogenase YP_886376.1 2091191 D 246196 CDS YP_886377.1 118470663 4534672 2092507..2093262 1 NC_008596.1 identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 2093262 4534672 MSMEG_2013 Mycobacterium smegmatis str. MC2 155 oxidoreductase, short chain dehydrogenase/reductase YP_886377.1 2092507 D 246196 CDS YP_886378.1 118471650 4536487 complement(2093263..2094348) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF03459; molybdenum import ATP-binding protein ModC 2094348 4536487 MSMEG_2014 Mycobacterium smegmatis str. MC2 155 molybdenum import ATP-binding protein ModC YP_886378.1 2093263 R 246196 CDS YP_886379.1 118473613 4531048 complement(2094345..2095157) 1 NC_008596.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01581; match to protein family HMM TIGR02141; molybdate ABC transporter permease 2095157 modB 4531048 modB Mycobacterium smegmatis str. MC2 155 molybdate ABC transporter permease YP_886379.1 2094345 R 246196 CDS YP_886380.1 118473123 4531850 complement(2095154..2095897) 1 NC_008596.1 identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256; molybdate ABC transporter periplasmic molybdate-binding protein 2095897 modA 4531850 modA Mycobacterium smegmatis str. MC2 155 molybdate ABC transporter periplasmic molybdate-binding protein YP_886380.1 2095154 R 246196 CDS YP_886381.1 118471489 4531891 complement(2095894..2096298) 1 NC_008596.1 identified by match to protein family HMM PF00376; match to protein family HMM PF03459; match to protein family HMM TIGR01764; MerR family transcriptional regulator 2096298 4531891 MSMEG_2017 Mycobacterium smegmatis str. MC2 155 MerR family transcriptional regulator YP_886381.1 2095894 R 246196 CDS YP_886382.1 118470758 4533661 2096408..2097154 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short-chain dehydrogenase/reductase SDR 2097154 4533661 MSMEG_2019 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase SDR YP_886382.1 2096408 D 246196 CDS YP_886383.1 118468380 4532929 2098884..2100914 1 NC_008596.1 identified by match to protein family HMM PF01757; lipopolysaccharide biosynthesis acyltransferase, M 2100914 4532929 MSMEG_2021 Mycobacterium smegmatis str. MC2 155 lipopolysaccharide biosynthesis acyltransferase, M YP_886383.1 2098884 D 246196 CDS YP_886384.1 118471668 4536468 2101118..2102572 1 NC_008596.1 identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM PF06808; GntT protein 2102572 4536468 MSMEG_2022 Mycobacterium smegmatis str. MC2 155 GntT protein YP_886384.1 2101118 D 246196 CDS YP_886385.1 118467693 4537331 2102587..2103825 1 NC_008596.1 identified by match to protein family HMM PF02515; CAIB/BAIF family protein 2103825 4537331 MSMEG_2023 Mycobacterium smegmatis str. MC2 155 CAIB/BAIF family protein YP_886385.1 2102587 D 246196 CDS YP_886386.1 118473372 4536616 2103822..2104766 1 NC_008596.1 identified by match to protein family HMM PF00682; hydroxymethylglutaryl-CoA lyase 2104766 4536616 MSMEG_2024 Mycobacterium smegmatis str. MC2 155 hydroxymethylglutaryl-CoA lyase YP_886386.1 2103822 D 246196 CDS YP_886387.1 118469051 4536865 2104783..2105565 1 NC_008596.1 identified by match to protein family HMM PF01614; IclR family protein transcriptional regulator 2105565 4536865 MSMEG_2025 Mycobacterium smegmatis str. MC2 155 IclR family protein transcriptional regulator YP_886387.1 2104783 D 246196 CDS YP_886388.1 118471316 4534656 2105584..2106414 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 2106414 4534656 MSMEG_2026 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_886388.1 2105584 D 246196 CDS YP_886389.1 118473151 4532592 complement(2106472..2106894) 1 NC_008596.1 identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 2106894 4532592 MSMEG_2027 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886389.1 2106472 R 246196 CDS YP_886390.1 118468035 4531392 complement(2106948..2108135) 1 NC_008596.1 identified by match to protein family HMM PF07690; chloramphenicol resistance protein 2108135 4531392 MSMEG_2028 Mycobacterium smegmatis str. MC2 155 chloramphenicol resistance protein YP_886390.1 2106948 R 246196 CDS YP_886391.1 118471620 4536533 complement(2108135..2108896) 1 NC_008596.1 identified by match to protein family HMM PF00106; 3-ketoacyl-ACP reductase 2108896 4536533 MSMEG_2029 Mycobacterium smegmatis str. MC2 155 3-ketoacyl-ACP reductase YP_886391.1 2108135 R 246196 CDS YP_886392.1 118469032 4530884 2108966..2109559 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2109559 4530884 MSMEG_2030 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886392.1 2108966 D 246196 CDS YP_886393.1 118471943 4536206 complement(2109561..2109743) 1 NC_008596.1 hypothetical protein 2109743 4536206 MSMEG_2031 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886393.1 2109561 R 246196 CDS YP_886394.1 118472564 4534148 2109768..2110526 1 NC_008596.1 identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044; hypothetical protein 2110526 4534148 MSMEG_2032 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886394.1 2109768 D 246196 CDS YP_886395.1 118471122 4533481 complement(2110538..2111509) 1 NC_008596.1 identified by match to protein family HMM PF00107; oxidoreductase, zinc-binding dehydrogenase 2111509 4533481 MSMEG_2033 Mycobacterium smegmatis str. MC2 155 oxidoreductase, zinc-binding dehydrogenase YP_886395.1 2110538 R 246196 CDS YP_886396.1 118470179 4530814 2111627..2112715 1 NC_008596.1 identified by match to protein family HMM PF00107; aryl-alcohol dehydrogenase 2112715 4530814 MSMEG_2034 Mycobacterium smegmatis str. MC2 155 aryl-alcohol dehydrogenase YP_886396.1 2111627 D 246196 CDS YP_886397.1 118468673 4535896 2112758..2113684 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 2113684 4535896 MSMEG_2036 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_886397.1 2112758 D 246196 CDS YP_886398.1 118471273 4532147 complement(2113659..2115026) 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01593; amine oxidase 2115026 4532147 MSMEG_2035 Mycobacterium smegmatis str. MC2 155 amine oxidase YP_886398.1 2113659 R 246196 CDS YP_886399.1 118469756 4532820 2115046..2116035 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 2116035 4532820 MSMEG_2037 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886399.1 2115046 D 246196 CDS YP_886400.1 118468210 4536652 2116080..2117639 1 NC_008596.1 identified by match to protein family HMM PF01266; monooxygenase, flavin-binding family protein 2117639 4536652 MSMEG_2038 Mycobacterium smegmatis str. MC2 155 monooxygenase, flavin-binding family protein YP_886400.1 2116080 D 246196 CDS YP_886401.1 118473779 4535136 complement(2117665..2118420) 1 NC_008596.1 identified by match to protein family HMM PF00165; transcriptional regulator 2118420 4535136 MSMEG_2039 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_886401.1 2117665 R 246196 CDS YP_886402.1 118473985 4531429 2118476..2118826 1 NC_008596.1 hypothetical protein 2118826 4531429 MSMEG_2040 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886402.1 2118476 D 246196 CDS YP_886403.1 118472707 4531675 complement(2119958..2121094) 1 NC_008596.1 identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein 2121094 4531675 MSMEG_2042 Mycobacterium smegmatis str. MC2 155 phosphotransferase enzyme family protein YP_886403.1 2119958 R 246196 CDS YP_886404.1 118473506 4533868 2121141..2121749 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2121749 4533868 MSMEG_2043 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886404.1 2121141 D 246196 CDS YP_886405.1 118470764 4533667 2121822..2123135 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; integral membrane transporter 2123135 4533667 MSMEG_2044 Mycobacterium smegmatis str. MC2 155 integral membrane transporter YP_886405.1 2121822 D 246196 CDS YP_886406.1 118469780 4535804 2123135..2124499 1 NC_008596.1 identified by match to protein family HMM PF00296; monoxygenase 2124499 4535804 MSMEG_2045 Mycobacterium smegmatis str. MC2 155 monoxygenase YP_886406.1 2123135 D 246196 CDS YP_886407.1 118472068 4536708 2124514..2125188 1 NC_008596.1 identified by match to protein family HMM PF02585; GlcNAc-PI de-N-acetylase 2125188 4536708 MSMEG_2046 Mycobacterium smegmatis str. MC2 155 GlcNAc-PI de-N-acetylase YP_886407.1 2124514 D 246196 CDS YP_886408.1 118469398 4532292 2125208..2126242 1 NC_008596.1 identified by match to protein family HMM PF00107; alcohol dehydrogenase 2126242 4532292 MSMEG_2048 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_886408.1 2125208 D 246196 CDS YP_886409.1 118469769 4532833 complement(2126239..2127006) 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2127006 4532833 MSMEG_2047 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_886409.1 2126239 R 246196 CDS YP_886410.1 118469430 4534326 2127094..2127675 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2127675 4534326 MSMEG_2049 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886410.1 2127094 D 246196 CDS YP_886411.1 118470109 4534944 complement(2127764..2129329) 1 NC_008596.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 2129329 nuoN 4534944 nuoN Mycobacterium smegmatis str. MC2 155 NADH dehydrogenase subunit N YP_886411.1 2127764 R 246196 CDS YP_886412.1 118473357 4530833 complement(2129331..2130920) 1 NC_008596.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 2130920 nuoM 4530833 nuoM Mycobacterium smegmatis str. MC2 155 NADH dehydrogenase subunit M YP_886412.1 2129331 R 246196 CDS YP_886413.1 118467369 4534054 complement(2130914..2132803) 1 NC_008596.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 2132803 nuoL 4534054 nuoL Mycobacterium smegmatis str. MC2 155 NADH dehydrogenase subunit L YP_886413.1 2130914 R 246196 CDS YP_886414.1 118470662 4534671 complement(2132811..2133110) 1 NC_008596.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 2133110 nuoK 4534671 nuoK Mycobacterium smegmatis str. MC2 155 NADH dehydrogenase subunit K YP_886414.1 2132811 R 246196 CDS YP_886415.1 118472606 4536884 complement(2133116..2133874) 1 NC_008596.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 2133874 4536884 MSMEG_2054 Mycobacterium smegmatis str. MC2 155 NADH dehydrogenase subunit J YP_886415.1 2133116 R 246196 CDS YP_886416.1 118467785 4535706 complement(2133871..2134413) 1 NC_008596.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 2134413 nuoI 4535706 nuoI Mycobacterium smegmatis str. MC2 155 NADH dehydrogenase subunit I YP_886416.1 2133871 R 246196 CDS YP_886417.1 118469595 4531100 complement(2134406..2135632) 1 NC_008596.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 2135632 nuoH 4531100 nuoH Mycobacterium smegmatis str. MC2 155 NADH dehydrogenase subunit H YP_886417.1 2134406 R 246196 CDS YP_886418.1 118467665 4536931 complement(2135629..2138013) 1 NC_008596.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 2138013 nuoG 4536931 nuoG Mycobacterium smegmatis str. MC2 155 NADH dehydrogenase subunit G YP_886418.1 2135629 R 246196 CDS YP_886419.1 118471561 4532209 complement(2138102..2139433) 1 NC_008596.1 identified by similarity to SP:P31979; match to protein family HMM PF01512; match to protein family HMM TIGR01959; NADH-quinone oxidoreductase subunit F 2139433 nuoF 4532209 nuoF Mycobacterium smegmatis str. MC2 155 NADH-quinone oxidoreductase subunit F YP_886419.1 2138102 R 246196 CDS YP_886420.1 118469125 4535338 complement(2139430..2140167) 1 NC_008596.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 2140167 4535338 MSMEG_2059 Mycobacterium smegmatis str. MC2 155 NADH dehydrogenase subunit E YP_886420.1 2139430 R 246196 CDS YP_886421.1 118473895 4536590 complement(2140228..2141556) 1 NC_008596.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 2141556 nuoD 4536590 nuoD Mycobacterium smegmatis str. MC2 155 NADH dehydrogenase subunit D YP_886421.1 2140228 R 246196 CDS YP_886422.1 118468371 4532920 complement(2141556..2142272) 1 NC_008596.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 2142272 4532920 MSMEG_2061 Mycobacterium smegmatis str. MC2 155 NADH dehydrogenase subunit C YP_886422.1 2141556 R 246196 CDS YP_886423.1 118467443 4535452 complement(2142269..2142823) 1 NC_008596.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 2142823 nuoB 4535452 nuoB Mycobacterium smegmatis str. MC2 155 NADH dehydrogenase subunit B YP_886423.1 2142269 R 246196 CDS YP_886424.1 118470227 4533918 complement(2142814..2143182) 1 NC_008596.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 2143182 nuoA 4533918 nuoA Mycobacterium smegmatis str. MC2 155 NADH dehydrogenase subunit A YP_886424.1 2142814 R 246196 CDS YP_886425.1 118469271 4532241 complement(2143366..2143764) 1 NC_008596.1 two-component system response regulator 2143764 4532241 MSMEG_2064 Mycobacterium smegmatis str. MC2 155 two-component system response regulator YP_886425.1 2143366 R 246196 CDS YP_886426.1 118473544 4532414 complement(2143828..2144346) 1 NC_008596.1 identified by match to protein family HMM PF04264; hypothetical protein 2144346 4532414 MSMEG_2065 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886426.1 2143828 R 246196 CDS YP_886427.1 118469478 4534452 complement(2144378..2144779) 1 NC_008596.1 hypothetical protein 2144779 4534452 MSMEG_2066 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886427.1 2144378 R 246196 CDS YP_886428.1 118468119 4535617 2144836..2145471 1 NC_008596.1 identified by match to protein family HMM PF05724; methyltransferase type 12 2145471 4535617 MSMEG_2067 Mycobacterium smegmatis str. MC2 155 methyltransferase type 12 YP_886428.1 2144836 D 246196 CDS YP_886429.1 118470466 4536775 complement(2145479..2145835) 1 NC_008596.1 hypothetical protein 2145835 4536775 MSMEG_2068 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886429.1 2145479 R 246196 CDS YP_886430.1 118472623 4537273 complement(2145832..2146821) 1 NC_008596.1 identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein 2146821 4537273 MSMEG_2069 Mycobacterium smegmatis str. MC2 155 phosphotransferase enzyme family protein YP_886430.1 2145832 R 246196 CDS YP_886431.1 118467950 4532061 complement(2146818..2148062) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 2148062 4532061 MSMEG_2070 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_886431.1 2146818 R 246196 CDS YP_886432.1 118470247 4536766 complement(2148073..2148684) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2148684 4536766 MSMEG_2071 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886432.1 2148073 R 246196 CDS YP_886433.1 118471757 4536365 complement(2148691..2149593) 1 NC_008596.1 identified by match to protein family HMM PF00682; 3-hydroxy-3-methylglutaryl-CoA lyase 2149593 4536365 MSMEG_2072 Mycobacterium smegmatis str. MC2 155 3-hydroxy-3-methylglutaryl-CoA lyase YP_886433.1 2148691 R 246196 CDS YP_886434.1 118468991 4535101 complement(2149593..2150795) 1 NC_008596.1 identified by match to protein family HMM PF02515; CAIB/BAIF family protein 2150795 4535101 MSMEG_2073 Mycobacterium smegmatis str. MC2 155 CAIB/BAIF family protein YP_886434.1 2149593 R 246196 CDS YP_886435.1 118470246 4536765 complement(2150792..2152021) 1 NC_008596.1 hypothetical protein 2152021 4536765 MSMEG_2074 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886435.1 2150792 R 246196 CDS YP_886436.1 118471986 4536133 complement(2152022..2153125) 1 NC_008596.1 identified by match to protein family HMM PF04209; homogentisate 1,2-dioxygenase 2153125 hmgA 4536133 hmgA Mycobacterium smegmatis str. MC2 155 homogentisate 1,2-dioxygenase YP_886436.1 2152022 R 246196 CDS YP_886437.1 118471248 4531524 complement(2153254..2153850) 1 NC_008596.1 identified by match to protein family HMM PF04229; hypothetical protein 2153850 4531524 MSMEG_2076 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886437.1 2153254 R 246196 CDS YP_886438.1 118468473 4537294 complement(2153861..2155042) 1 NC_008596.1 identified by match to protein family HMM PF08028; acyl-CoA dehydrogenase 2155042 4537294 MSMEG_2077 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_886438.1 2153861 R 246196 CDS YP_886439.1 118473709 4533257 2155501..2156478 1 NC_008596.1 identified by match to protein family HMM PF00756; antigen 85-C 2156478 4533257 MSMEG_2078 Mycobacterium smegmatis str. MC2 155 antigen 85-C YP_886439.1 2155501 D 246196 CDS YP_886440.1 118469856 4530894 complement(2156545..2157543) 1 NC_008596.1 identified by match to protein family HMM PF00107; match to protein family HMM TIGR02823; alcohol dehydrogenase 2157543 4530894 MSMEG_2079 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_886440.1 2156545 R 246196 CDS YP_886441.1 118470733 4533284 complement(2157633..2158853) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 2158853 4533284 MSMEG_2080 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_886441.1 2157633 R 246196 CDS YP_886442.1 118472697 4531665 complement(2158889..2160217) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 2160217 4531665 MSMEG_2081 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_886442.1 2158889 R 246196 CDS YP_886443.1 118470535 4536127 2160227..2160346 1 NC_008596.1 hypothetical protein 2160346 4536127 MSMEG_2082 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886443.1 2160227 D 246196 CDS YP_886444.1 118473604 4531039 complement(2160404..2161186) 1 NC_008596.1 identified by match to protein family HMM PF00459; match to protein family HMM TIGR02067; inositol monophosphatase 2161186 4531039 MSMEG_2083 Mycobacterium smegmatis str. MC2 155 inositol monophosphatase YP_886444.1 2160404 R 246196 CDS YP_886445.1 118471748 4536395 2161210..2161590 1 NC_008596.1 hypothetical protein 2161590 4536395 MSMEG_2084 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886445.1 2161210 D 246196 CDS YP_886446.1 118473158 4532599 2163153..2164259 1 NC_008596.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 2164259 prfB 4532599 prfB Mycobacterium smegmatis str. MC2 155 peptide chain release factor 2 YP_886446.1 2163153 D 246196 CDS YP_886447.1 118473758 4537734 2164249..2165229 1 NC_008596.1 identified by match to protein family HMM PF00924; transporter small conductance mechanosensitive ion channel (MscS) family protein 2165229 4537734 MSMEG_2087 Mycobacterium smegmatis str. MC2 155 transporter small conductance mechanosensitive ion channel (MscS) family protein YP_886447.1 2164249 D 246196 CDS YP_886448.1 118469794 4535934 2165307..2165747 1 NC_008596.1 hypothetical protein 2165747 4535934 MSMEG_2088 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886448.1 2165307 D 246196 CDS YP_886449.1 118473811 4531621 2165793..2166482 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR00960; match to protein family HMM TIGR02673; cell division ATP-binding protein FtsE 2166482 ftsE 4531621 ftsE Mycobacterium smegmatis str. MC2 155 cell division ATP-binding protein FtsE YP_886449.1 2165793 D 246196 CDS YP_886450.1 118472638 4537657 2166483..2167379 1 NC_008596.1 identified by match to protein family HMM PF02687; cell division protein FtsX 2167379 4537657 MSMEG_2090 Mycobacterium smegmatis str. MC2 155 cell division protein FtsX YP_886450.1 2166483 D 246196 CDS YP_886451.1 118473405 4537023 2167390..2167875 1 NC_008596.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2167875 smpB 4537023 smpB Mycobacterium smegmatis str. MC2 155 SsrA-binding protein YP_886451.1 2167390 D 246196 CDS YP_886452.1 118469466 4535729 2168040..2169143 1 NC_008596.1 identified by match to protein family HMM PF03576; D-aminopeptidase 2169143 4535729 MSMEG_2092 Mycobacterium smegmatis str. MC2 155 D-aminopeptidase YP_886452.1 2168040 D 246196 CDS YP_886453.1 118472430 4532047 complement(2169678..2171087) 1 NC_008596.1 identified by match to protein family HMM PF05694; 56kDa selenium binding protein 2171087 4532047 MSMEG_2094 Mycobacterium smegmatis str. MC2 155 56kDa selenium binding protein YP_886453.1 2169678 R 246196 CDS YP_886454.1 118472843 4537439 2171219..2172142 1 NC_008596.1 identified by match to protein family HMM PF01083; serine esterase, cutinase 2172142 4537439 MSMEG_2095 Mycobacterium smegmatis str. MC2 155 serine esterase, cutinase YP_886454.1 2171219 D 246196 CDS YP_886455.1 118468712 4532781 complement(2172275..2173018) 1 NC_008596.1 identified by match to protein family HMM PF01925; integral membrane protein 2173018 4532781 MSMEG_2096 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_886455.1 2172275 R 246196 CDS YP_886456.1 118472262 4531571 complement(2173038..2174138) 1 NC_008596.1 identified by match to protein family HMM PF03417; acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 2174138 4531571 MSMEG_2097 Mycobacterium smegmatis str. MC2 155 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase YP_886456.1 2173038 R 246196 CDS YP_886457.1 118469089 4537645 complement(2174138..2175013) 1 NC_008596.1 identified by match to protein family HMM PF01557; fumarylacetoacetate hydrolase 2175013 4537645 MSMEG_2098 Mycobacterium smegmatis str. MC2 155 fumarylacetoacetate hydrolase YP_886457.1 2174138 R 246196 CDS YP_886458.1 118469990 4533113 complement(2175058..2176023) 1 NC_008596.1 nitrate/sulfonate ABC transporter substrate-binding protein 2176023 4533113 MSMEG_2099 Mycobacterium smegmatis str. MC2 155 nitrate/sulfonate ABC transporter substrate-binding protein YP_886458.1 2175058 R 246196 CDS YP_886459.1 118473720 4536954 complement(2176102..2177433) 1 NC_008596.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; peptidase M20/M25/M40 2177433 4536954 MSMEG_2100 Mycobacterium smegmatis str. MC2 155 peptidase M20/M25/M40 YP_886459.1 2176102 R 246196 CDS YP_886460.1 118467969 4535151 complement(2178248..2179069) 1 NC_008596.1 identified by match to protein family HMM PF00005; nitrate transport ATP-binding protein NrtD 2179069 4535151 MSMEG_2102 Mycobacterium smegmatis str. MC2 155 nitrate transport ATP-binding protein NrtD YP_886460.1 2178248 R 246196 CDS YP_886461.1 118468674 4535897 complement(2179121..2180020) 1 NC_008596.1 5,10-methylenetetrahydromethanopterin reductase 2180020 4535897 MSMEG_2103 Mycobacterium smegmatis str. MC2 155 5,10-methylenetetrahydromethanopterin reductase YP_886461.1 2179121 R 246196 CDS YP_886462.1 118470175 4530810 complement(2180401..2181750) 1 NC_008596.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator 2181750 4530810 MSMEG_2104 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_886462.1 2180401 R 246196 CDS YP_886463.1 118467938 4533417 complement(2182038..2183003) 1 NC_008596.1 ATP dependent DNA ligase 2183003 4533417 MSMEG_2105 Mycobacterium smegmatis str. MC2 155 ATP dependent DNA ligase YP_886463.1 2182038 R 246196 CDS YP_886464.1 118469123 4535336 2183185..2184645 1 NC_008596.1 hypothetical protein 2184645 4535336 MSMEG_2107 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886464.1 2183185 D 246196 CDS YP_886465.1 118471397 4534872 complement(2184617..2185249) 1 NC_008596.1 identified by match to protein family HMM PF00440; match to protein family HMM PF02796; transcriptional regulator 2185249 4534872 MSMEG_2106 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_886465.1 2184617 R 246196 CDS YP_886466.1 118472730 4532359 2185414..2186352 1 NC_008596.1 hypothetical protein 2186352 4532359 MSMEG_2108 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886466.1 2185414 D 246196 CDS YP_886467.1 118470395 4533456 2186345..2187502 1 NC_008596.1 hypothetical protein 2187502 4533456 MSMEG_2109 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886467.1 2186345 D 246196 CDS YP_886468.1 118473918 4536984 2187612..2188592 1 NC_008596.1 hypothetical protein 2188592 4536984 MSMEG_2110 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886468.1 2187612 D 246196 CDS YP_886469.1 118472117 4532159 2188645..2189190 1 NC_008596.1 catalyzes the interconversion of chorismate to prephenate; chorismate mutase 2189190 4532159 MSMEG_2111 Mycobacterium smegmatis str. MC2 155 chorismate mutase YP_886469.1 2188645 D 246196 CDS YP_886470.1 118473826 4531980 2189268..2189852 1 NC_008596.1 hypothetical protein 2189852 4531980 MSMEG_2112 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886470.1 2189268 D 246196 CDS YP_886471.1 118467762 4533393 2189849..2190382 1 NC_008596.1 hypothetical protein 2190382 4533393 MSMEG_2115 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886471.1 2189849 D 246196 CDS YP_886472.1 118472714 4531682 complement(2190275..2190532) 1 NC_008596.1 hypothetical protein 2190532 4531682 MSMEG_2113 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886472.1 2190275 R 246196 CDS YP_886473.1 118473459 4534903 complement(2190361..2190525) 1 NC_008596.1 glucose-6-phosphate isomerase 2190525 4534903 MSMEG_2114 Mycobacterium smegmatis str. MC2 155 glucose-6-phosphate isomerase YP_886473.1 2190361 R 246196 CDS YP_886474.1 118472299 4532771 complement(2190853..2192436) 1 NC_008596.1 identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; PTS system, glucose-specific IIBC component 2192436 4532771 MSMEG_2116 Mycobacterium smegmatis str. MC2 155 PTS system, glucose-specific IIBC component YP_886474.1 2190853 R 246196 CDS YP_886475.1 118469094 4535286 2192581..2193051 1 NC_008596.1 identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830; beta-glucoside-specific EII permease 2193051 4535286 MSMEG_2117 Mycobacterium smegmatis str. MC2 155 beta-glucoside-specific EII permease YP_886475.1 2192581 D 246196 CDS YP_886476.1 118467625 4534199 2193073..2193858 1 NC_008596.1 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase 2193858 nagB 4534199 nagB Mycobacterium smegmatis str. MC2 155 glucosamine-6-phosphate deaminase YP_886476.1 2193073 D 246196 CDS YP_886477.1 118470549 4533003 2193860..2195017 1 NC_008596.1 identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221; N-acetylglucosamine-6-phosphate deacetylase 2195017 nagA 4533003 nagA Mycobacterium smegmatis str. MC2 155 N-acetylglucosamine-6-phosphate deacetylase YP_886477.1 2193860 D 246196 CDS YP_886478.1 118472503 4533733 2195157..2197775 1 NC_008596.1 identified by match to protein family HMM PF00196; hypothetical protein 2197775 4533733 MSMEG_2120 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886478.1 2195157 D 246196 CDS YP_886479.1 118472228 4531479 complement(2197776..2200202) 1 NC_008596.1 identified by match to protein family HMM PF00381; match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF03610; match to protein family HMM PF05524; match to protein family HMM TIGR01003; match to protein family HMM TIGR01417; match to protein family HMM TIGR02364; multiphosphoryl transfer protein (MTP) 2200202 4531479 MSMEG_2121 Mycobacterium smegmatis str. MC2 155 multiphosphoryl transfer protein (MTP) YP_886479.1 2197776 R 246196 CDS YP_886480.1 118467666 4536932 complement(2200199..2200831) 1 NC_008596.1 identified by match to protein family HMM PF02734; match to protein family HMM TIGR02365; dihydroxyacetone kinase subunit DhaL 2200831 4536932 MSMEG_2122 Mycobacterium smegmatis str. MC2 155 dihydroxyacetone kinase subunit DhaL YP_886480.1 2200199 R 246196 CDS YP_886481.1 118469355 4533179 complement(2200833..2201831) 1 NC_008596.1 identified by match to protein family HMM PF02733; match to protein family HMM TIGR02363; dihydroxyacetone kinase subunit DhaK 2201831 dhaK 4533179 dhaK Mycobacterium smegmatis str. MC2 155 dihydroxyacetone kinase subunit DhaK YP_886481.1 2200833 R 246196 CDS YP_886482.1 118469855 4530893 complement(2201841..2202608) 1 NC_008596.1 identified by match to protein family HMM PF00230; glycerol uptake facilitator, MIP channel 2202608 4530893 MSMEG_2124 Mycobacterium smegmatis str. MC2 155 glycerol uptake facilitator, MIP channel YP_886482.1 2201841 R 246196 CDS YP_886483.1 118473315 4535187 2202762..2203508 1 NC_008596.1 identified by match to protein family HMM PF01614; glycerol operon regulatory protein 2203508 4535187 MSMEG_2125 Mycobacterium smegmatis str. MC2 155 glycerol operon regulatory protein YP_886483.1 2202762 D 246196 CDS YP_886484.1 118467399 4535820 2203331..2203729 1 NC_008596.1 hypothetical protein 2203729 4535820 MSMEG_2126 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886484.1 2203331 D 246196 CDS YP_886485.1 118469417 4531970 2203799..2204158 1 NC_008596.1 identified by match to protein family HMM PF04343; hypothetical protein 2204158 4531970 MSMEG_2127 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886485.1 2203799 D 246196 CDS YP_886486.1 118470319 4535197 2204236..2204883 1 NC_008596.1 malonyl CoA decarboxylase 2204883 4535197 MSMEG_2128 Mycobacterium smegmatis str. MC2 155 malonyl CoA decarboxylase YP_886486.1 2204236 D 246196 CDS YP_886487.1 118468862 4535635 2205039..2205167 1 NC_008596.1 hypothetical protein 2205167 4535635 MSMEG_2129 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886487.1 2205039 D 246196 CDS YP_886488.1 118468588 4532715 complement(2205201..2206385) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 2206385 4532715 MSMEG_2130 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_886488.1 2205201 R 246196 CDS YP_886489.1 118473699 4533247 complement(2206382..2207962) 1 NC_008596.1 converts medium- to long-chain aliphatic fatty acids into acyl adenylate; involved in mycobactin synthesis; long-chain-fatty-acid--ACP ligase 2207962 4533247 MSMEG_2131 Mycobacterium smegmatis str. MC2 155 long-chain-fatty-acid--ACP ligase YP_886489.1 2206382 R 246196 CDS YP_886490.1 118473022 4532343 complement(2207959..2208228) 1 NC_008596.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 2208228 4532343 MSMEG_2132 Mycobacterium smegmatis str. MC2 155 acyl carrier protein YP_886490.1 2207959 R 246196 CDS YP_886491.1 118467724 4534007 complement(2208288..2209358) 1 NC_008596.1 identified by match to protein family HMM PF02641; hypothetical protein 2209358 4534007 MSMEG_2133 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886491.1 2208288 R 246196 CDS YP_886492.1 118470191 4530826 complement(2209355..2209720) 1 NC_008596.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 2209720 crcB 4530826 crcB Mycobacterium smegmatis str. MC2 155 camphor resistance protein CrcB YP_886492.1 2209355 R 246196 CDS YP_886493.1 118468559 4533693 complement(2209717..2210115) 1 NC_008596.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 2210115 4533693 MSMEG_2135 Mycobacterium smegmatis str. MC2 155 camphor resistance protein CrcB YP_886493.1 2209717 R 246196 CDS YP_886494.1 118473345 4532011 2210186..2211820 1 NC_008596.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 2211820 pgm 4532011 pgm Mycobacterium smegmatis str. MC2 155 phosphoglucomutase YP_886494.1 2210186 D 246196 CDS YP_886495.1 118472706 4531674 2211817..2213085 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; permease of the major facilitator superfamily protein 2213085 4531674 MSMEG_2137 Mycobacterium smegmatis str. MC2 155 permease of the major facilitator superfamily protein YP_886495.1 2211817 D 246196 CDS YP_886496.1 118468554 4536106 complement(2213383..2213484) 1 NC_008596.1 hypothetical protein 2213484 4536106 MSMEG_2139 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886496.1 2213383 R 246196 CDS YP_886497.1 118469145 4532561 complement(2213518..2214726) 1 NC_008596.1 identified by match to protein family HMM PF02661; Fic family protein 2214726 4532561 MSMEG_2140 Mycobacterium smegmatis str. MC2 155 Fic family protein YP_886497.1 2213518 R 246196 CDS YP_886498.1 118472964 4532303 2214785..2215036 1 NC_008596.1 gp35 protein 2215036 4532303 MSMEG_2141 Mycobacterium smegmatis str. MC2 155 gp35 protein YP_886498.1 2214785 D 246196 CDS YP_886499.1 118470064 4535957 2215051..2215749 1 NC_008596.1 gp36 protein 2215749 4535957 MSMEG_2142 Mycobacterium smegmatis str. MC2 155 gp36 protein YP_886499.1 2215051 D 246196 CDS YP_886500.1 118473979 4531423 complement(2215760..2216200) 1 NC_008596.1 hypothetical protein 2216200 4531423 MSMEG_2143 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886500.1 2215760 R 246196 CDS YP_886501.1 118473266 4537696 complement(2216197..2216793) 1 NC_008596.1 hypothetical protein 2216793 4537696 MSMEG_2144 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886501.1 2216197 R 246196 CDS YP_886502.1 118472102 4537483 2217015..2217425 1 NC_008596.1 hypothetical protein 2217425 4537483 MSMEG_2145 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886502.1 2217015 D 246196 CDS YP_886503.1 118471371 4535278 2217440..2221084 1 NC_008596.1 gp15 protein 2221084 4535278 MSMEG_2146 Mycobacterium smegmatis str. MC2 155 gp15 protein YP_886503.1 2217440 D 246196 CDS YP_886504.1 118469414 4531967 2222742..2224376 1 NC_008596.1 identified by match to protein family HMM PF01844; HNH endonuclease domain-containing protein 2224376 4531967 MSMEG_2148 Mycobacterium smegmatis str. MC2 155 HNH endonuclease domain-containing protein YP_886504.1 2222742 D 246196 CDS YP_886505.1 118473101 4531162 2224483..2224938 1 NC_008596.1 hypothetical protein 2224938 4531162 MSMEG_2149 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886505.1 2224483 D 246196 CDS YP_886506.1 118473799 4531278 complement(2225109..2225963) 1 NC_008596.1 identified by match to protein family HMM PF01695; transposition helper protein 2225963 4531278 MSMEG_2150 Mycobacterium smegmatis str. MC2 155 transposition helper protein YP_886506.1 2225109 R 246196 CDS YP_886507.1 118471651 4536488 complement(2225960..2227321) 1 NC_008596.1 identified by match to protein family HMM PF00665; transposase IstA protein 2227321 4536488 MSMEG_2151 Mycobacterium smegmatis str. MC2 155 transposase IstA protein YP_886507.1 2225960 R 246196 CDS YP_886508.1 118471079 4537522 complement(2228170..2228763) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2228763 4537522 MSMEG_2153 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886508.1 2228170 R 246196 CDS YP_886509.1 118468106 4535604 2228863..2229687 1 NC_008596.1 hypothetical protein 2229687 4535604 MSMEG_2154 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886509.1 2228863 D 246196 CDS YP_886510.1 118474042 4531723 2229760..2230743 1 NC_008596.1 identified by match to protein family HMM PF00107; trans-2-enoyl-CoA reductase 2230743 4531723 MSMEG_2155 Mycobacterium smegmatis str. MC2 155 trans-2-enoyl-CoA reductase YP_886510.1 2229760 D 246196 CDS YP_886511.1 118471391 4534985 2230794..2231729 1 NC_008596.1 identified by match to protein family HMM PF05368; hypothetical protein 2231729 4534985 MSMEG_2156 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886511.1 2230794 D 246196 CDS YP_886512.1 118469534 4537108 2231876..2232784 1 NC_008596.1 hypothetical protein 2232784 4537108 MSMEG_2157 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886512.1 2231876 D 246196 CDS YP_886513.1 118471891 4536228 2232790..2233644 1 NC_008596.1 identified by match to protein family HMM PF05114; hypothetical protein 2233644 4536228 MSMEG_2159 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886513.1 2232790 D 246196 CDS YP_886514.1 118471458 4534377 complement(2233443..2233865) 1 NC_008596.1 hypothetical protein 2233865 4534377 MSMEG_2158 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886514.1 2233443 R 246196 CDS YP_886515.1 118470349 4534623 2233641..2233796 1 NC_008596.1 hypothetical protein 2233796 4534623 MSMEG_2160 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886515.1 2233641 D 246196 CDS YP_886516.1 118472411 4531332 2237715..2238554 1 NC_008596.1 MmcJ protein 2238554 4531332 MSMEG_2162 Mycobacterium smegmatis str. MC2 155 MmcJ protein YP_886516.1 2237715 D 246196 CDS YP_886517.1 118470929 4533977 2238574..2240016 1 NC_008596.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 2240016 4533977 MSMEG_2163 Mycobacterium smegmatis str. MC2 155 aldehyde dehydrogenase YP_886517.1 2238574 D 246196 CDS YP_886518.1 118471158 4530948 2240142..2240876 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptional regulator 2240876 4530948 MSMEG_2164 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_886518.1 2240142 D 246196 CDS YP_886519.1 118470356 4534631 2241113..2241976 1 NC_008596.1 identified by match to protein family HMM PF00456; transketolase 2241976 4534631 MSMEG_2165 Mycobacterium smegmatis str. MC2 155 transketolase YP_886519.1 2241113 D 246196 CDS YP_886520.1 118471556 4532204 2241973..2243007 1 NC_008596.1 identified by match to protein family HMM PF02779; match to protein family HMM PF02780; transketolase 2243007 4532204 MSMEG_2166 Mycobacterium smegmatis str. MC2 155 transketolase YP_886520.1 2241973 D 246196 CDS YP_886521.1 118467766 4533397 2243141..2244442 1 NC_008596.1 identified by match to protein family HMM PF00557; aminopeptidase 2244442 4533397 MSMEG_2167 Mycobacterium smegmatis str. MC2 155 aminopeptidase YP_886521.1 2243141 D 246196 CDS YP_886522.1 118472680 4532945 2244465..2244662 1 NC_008596.1 hypothetical protein 2244662 4532945 MSMEG_2168 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886522.1 2244465 D 246196 CDS YP_886523.1 118470772 4531136 2244650..2245630 1 NC_008596.1 identified by match to protein family HMM PF03446; match to protein family HMM PF03807; 3-hydroxyisobutyrate dehydrogenase 2245630 4531136 MSMEG_2170 Mycobacterium smegmatis str. MC2 155 3-hydroxyisobutyrate dehydrogenase YP_886523.1 2244650 D 246196 CDS YP_886524.1 118467380 4533851 complement(2245536..2247044) 1 NC_008596.1 identified by match to protein family HMM PF01039; acetyl-CoA carboxylase, carboxyl transferase subunit beta 2247044 accD 4533851 accD Mycobacterium smegmatis str. MC2 155 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_886524.1 2245536 R 246196 CDS YP_886525.1 118470226 4533917 complement(2247041..2248261) 1 NC_008596.1 identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F 2248261 4533917 MSMEG_2171 Mycobacterium smegmatis str. MC2 155 L-carnitine dehydratase/bile acid-inducible protein F YP_886525.1 2247041 R 246196 CDS YP_886526.1 118471233 4534420 complement(2248470..2249870) 1 NC_008596.1 identified by match to protein family HMM PF03600; match to protein family HMM PF07158; dicarboxylate-carrier protein 2249870 4534420 MSMEG_2172 Mycobacterium smegmatis str. MC2 155 dicarboxylate-carrier protein YP_886526.1 2248470 R 246196 CDS YP_886527.1 118473893 4536588 2250029..2250721 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 2250721 4536588 MSMEG_2173 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_886527.1 2250029 D 246196 CDS YP_886528.1 118467483 4537001 2250877..2253087 1 NC_008596.1 superfamily protein I DNA or RNA helicase 2253087 4537001 MSMEG_2174 Mycobacterium smegmatis str. MC2 155 superfamily protein I DNA or RNA helicase YP_886528.1 2250877 D 246196 CDS YP_886529.1 118469377 4535891 2253121..2253447 1 NC_008596.1 hypothetical protein 2253447 4535891 MSMEG_2176 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886529.1 2253121 D 246196 CDS YP_886530.1 118467393 4533864 complement(2253444..2254820) 1 NC_008596.1 nitrilotriacetate monooxygenase component A 2254820 4533864 MSMEG_2175 Mycobacterium smegmatis str. MC2 155 nitrilotriacetate monooxygenase component A YP_886530.1 2253444 R 246196 CDS YP_886531.1 118468331 4532082 complement(2254841..2256019) 1 NC_008596.1 fmnh2-utilizing oxygenase 2256019 4532082 MSMEG_2177 Mycobacterium smegmatis str. MC2 155 fmnh2-utilizing oxygenase YP_886531.1 2254841 R 246196 CDS YP_886532.1 118470156 4534334 complement(2256187..2256384) 1 NC_008596.1 integral membrane protein 2256384 4534334 MSMEG_2178 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_886532.1 2256187 R 246196 CDS YP_886533.1 118471966 4536151 2256454..2257758 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulatory protein 2257758 4536151 MSMEG_2179 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_886533.1 2256454 D 246196 CDS YP_886534.1 118473025 4532346 complement(2257799..2258323) 1 NC_008596.1 RemK protein 2258323 4532346 MSMEG_2180 Mycobacterium smegmatis str. MC2 155 RemK protein YP_886534.1 2257799 R 246196 CDS YP_886535.1 118467741 4535640 2258412..2259011 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 2259011 4535640 MSMEG_2182 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_886535.1 2258412 D 246196 CDS YP_886536.1 118471099 4535864 complement(2258987..2259802) 1 NC_008596.1 identified by match to protein family HMM PF02661; cell filamentation protein 2259802 4535864 MSMEG_2181 Mycobacterium smegmatis str. MC2 155 cell filamentation protein YP_886536.1 2258987 R 246196 CDS YP_886537.1 118471798 4536330 complement(2259796..2260779) 1 NC_008596.1 hypothetical protein 2260779 4536330 MSMEG_2183 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886537.1 2259796 R 246196 CDS YP_886538.1 118469034 4530886 2260965..2262506 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 2262506 4530886 MSMEG_2184 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_886538.1 2260965 D 246196 CDS YP_886539.1 118471439 4535114 2262515..2263351 1 NC_008596.1 hypothetical protein 2263351 4535114 MSMEG_2185 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886539.1 2262515 D 246196 CDS YP_886540.1 118468093 4536021 2263348..2263971 1 NC_008596.1 hypothetical protein 2263971 4536021 MSMEG_2186 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886540.1 2263348 D 246196 CDS YP_886541.1 118468921 4537083 2263968..2265989 1 NC_008596.1 identified by match to protein family HMM PF02626; match to protein family HMM PF02682; match to protein family HMM TIGR00724; urea amidolyase 2265989 4537083 MSMEG_2187 Mycobacterium smegmatis str. MC2 155 urea amidolyase YP_886541.1 2263968 D 246196 CDS YP_886542.1 118472735 4532364 2265986..2267656 1 NC_008596.1 identified by match to protein family HMM PF01425; match to protein family HMM TIGR02713; allophanate hydrolase 2267656 atzF 4532364 atzF Mycobacterium smegmatis str. MC2 155 allophanate hydrolase YP_886542.1 2265986 D 246196 CDS YP_886543.1 118468871 4533756 complement(2267604..2268578) 1 NC_008596.1 identified by match to protein family HMM PF00892; integral membrane protein 2268578 4533756 MSMEG_2188 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_886543.1 2267604 R 246196 CDS YP_886544.1 118472422 4532039 complement(2268648..2269790) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 2269790 4532039 MSMEG_2190 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_886544.1 2268648 R 246196 CDS YP_886545.1 118467502 4537389 complement(2269802..2271034) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; acyl-CoA dehydrogenase 2271034 4537389 MSMEG_2191 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_886545.1 2269802 R 246196 CDS YP_886546.1 118468061 4534176 2271168..2271569 1 NC_008596.1 hypothetical protein 2271569 4534176 MSMEG_2192 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886546.1 2271168 D 246196 CDS YP_886547.1 118469655 4535065 2271642..2272415 1 NC_008596.1 identified by match to protein family HMM PF00376; match to protein family HMM PF07739; MerR family transcriptional regulator 2272415 4535065 MSMEG_2194 Mycobacterium smegmatis str. MC2 155 MerR family transcriptional regulator YP_886547.1 2271642 D 246196 CDS YP_886548.1 118468493 4537682 complement(2272412..2273065) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2273065 4537682 MSMEG_2193 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886548.1 2272412 R 246196 CDS YP_886549.1 118469872 4536563 complement(2273072..2273773) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2273773 4536563 MSMEG_2195 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886549.1 2273072 R 246196 CDS YP_886550.1 118472534 4534733 2274343..2275170 1 NC_008596.1 hypothetical protein 2275170 4534733 MSMEG_2197 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886550.1 2274343 D 246196 CDS YP_886551.1 118467440 4535449 complement(2275150..2276997) 1 NC_008596.1 identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254; sensory box/response regulator 2276997 4535449 MSMEG_2196 Mycobacterium smegmatis str. MC2 155 sensory box/response regulator YP_886551.1 2275150 R 246196 CDS YP_886552.1 118469451 4534828 complement(2277027..2279198) 1 NC_008596.1 identified by match to protein family HMM PF00899; hypothetical protein 2279198 4534828 MSMEG_2198 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886552.1 2277027 R 246196 CDS YP_886553.1 118471208 4533810 complement(2279195..2279959) 1 NC_008596.1 hypothetical protein 2279959 4533810 MSMEG_2199 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886553.1 2279195 R 246196 CDS YP_886554.1 118472154 4535680 2280439..2281332 1 NC_008596.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 2281332 purU 4535680 purU Mycobacterium smegmatis str. MC2 155 formyltetrahydrofolate deformylase YP_886554.1 2280439 D 246196 CDS YP_886555.1 118469564 4537510 2281354..2281806 1 NC_008596.1 identified by match to protein family HMM PF01575; ZbpA protein 2281806 4537510 MSMEG_2201 Mycobacterium smegmatis str. MC2 155 ZbpA protein YP_886555.1 2281354 D 246196 CDS YP_886556.1 118473385 4536630 2281948..2283312 1 NC_008596.1 identified by match to protein family HMM PF00743; dimethylaniline monooxygenase 2283312 4536630 MSMEG_2202 Mycobacterium smegmatis str. MC2 155 dimethylaniline monooxygenase YP_886556.1 2281948 D 246196 CDS YP_886557.1 118467659 4535007 2283309..2284205 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 2284205 4535007 MSMEG_2203 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_886557.1 2283309 D 246196 CDS YP_886558.1 118472931 4531220 complement(2284280..2285101) 1 NC_008596.1 identified by match to protein family HMM PF00106; carveol dehydrogenase 2285101 4531220 MSMEG_2204 Mycobacterium smegmatis str. MC2 155 carveol dehydrogenase YP_886558.1 2284280 R 246196 CDS YP_886559.1 118471201 4531495 complement(2285144..2286337) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 2286337 4531495 MSMEG_2205 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_886559.1 2285144 R 246196 CDS YP_886560.1 118472125 4532167 2286455..2287189 1 NC_008596.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2287189 fabG 4532167 fabG Mycobacterium smegmatis str. MC2 155 3-ketoacyl-ACP reductase YP_886560.1 2286455 D 246196 CDS YP_886561.1 118473935 4537373 2287186..2288409 1 NC_008596.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 2288409 4537373 MSMEG_2207 Mycobacterium smegmatis str. MC2 155 acetyl-CoA acetyltransferase YP_886561.1 2287186 D 246196 CDS YP_886562.1 118472013 4533614 2288417..2289610 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 2289610 4533614 MSMEG_2208 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_886562.1 2288417 D 246196 CDS YP_886563.1 118468374 4532923 2289614..2290282 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 2290282 4532923 MSMEG_2209 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_886563.1 2289614 D 246196 CDS YP_886564.1 118473788 4535146 complement(2291531..2292370) 1 NC_008596.1 identified by match to protein family HMM PF01381; DNA-binding protein 2292370 4535146 MSMEG_2211 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_886564.1 2291531 R 246196 CDS YP_886565.1 118468364 4533963 2292544..2293488 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 2293488 4533963 MSMEG_2212 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_886565.1 2292544 D 246196 CDS YP_886566.1 118468153 4532696 2293527..2294720 1 NC_008596.1 identified by match to protein family HMM PF00891; O-methyltransferase 2294720 4532696 MSMEG_2213 Mycobacterium smegmatis str. MC2 155 O-methyltransferase YP_886566.1 2293527 D 246196 CDS YP_886567.1 118470035 4531650 complement(2294995..2296497) 1 NC_008596.1 identified by match to protein family HMM PF00501; AMP-binding protein 2296497 4531650 MSMEG_2215 Mycobacterium smegmatis str. MC2 155 AMP-binding protein YP_886567.1 2294995 R 246196 CDS YP_886568.1 118471947 4536171 complement(2296490..2297974) 1 NC_008596.1 identified by match to protein family HMM PF00501; AMP-binding protein 2297974 4536171 MSMEG_2216 Mycobacterium smegmatis str. MC2 155 AMP-binding protein YP_886568.1 2296490 R 246196 CDS YP_886569.1 118472288 4532760 complement(2297967..2299418) 1 NC_008596.1 identified by match to protein family HMM PF00501; AMP-dependent synthetase/ligase 2299418 4532760 MSMEG_2217 Mycobacterium smegmatis str. MC2 155 AMP-dependent synthetase/ligase YP_886569.1 2297967 R 246196 CDS YP_886570.1 118471682 4536444 complement(2299418..2300200) 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 2300200 4536444 MSMEG_2218 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase/isomerase YP_886570.1 2299418 R 246196 CDS YP_886571.1 118467621 4533083 complement(2300197..2301003) 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 2301003 4533083 MSMEG_2219 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase/isomerase YP_886571.1 2300197 R 246196 CDS YP_886572.1 118468468 4537289 complement(2301024..2301845) 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 2301845 4537289 MSMEG_2220 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase/isomerase YP_886572.1 2301024 R 246196 CDS YP_886573.1 118470950 4533686 2301934..2302098 1 NC_008596.1 hypothetical protein 2302098 4533686 MSMEG_2221 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886573.1 2301934 D 246196 CDS YP_886574.1 118469607 4531579 2301963..2302109 1 NC_008596.1 hypothetical protein 2302109 4531579 MSMEG_2222 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886574.1 2301963 D 246196 CDS YP_886575.1 118469922 4535576 2302131..2303000 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 2303000 4535576 MSMEG_2223 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase/isomerase YP_886575.1 2302131 D 246196 CDS YP_886576.1 118470841 4534295 2303045..2304229 1 NC_008596.1 identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; acetyl-CoA C-acyltransferase 2304229 4534295 MSMEG_2224 Mycobacterium smegmatis str. MC2 155 acetyl-CoA C-acyltransferase YP_886576.1 2303045 D 246196 CDS YP_886577.1 118472381 4534771 complement(2304294..2305031) 1 NC_008596.1 identified by match to protein family HMM PF00440; match to protein family HMM PF02909; TetR family transcriptional regulator 2305031 4534771 MSMEG_2225 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886577.1 2304294 R 246196 CDS YP_886578.1 118468967 4533531 complement(2305009..2305179) 1 NC_008596.1 hypothetical protein 2305179 4533531 MSMEG_2226 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886578.1 2305009 R 246196 CDS YP_886579.1 118467896 4531252 2305317..2306081 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2306081 4531252 MSMEG_2227 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_886579.1 2305317 D 246196 CDS YP_886580.1 118467612 4533074 2306091..2306888 1 NC_008596.1 identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 2306888 4533074 MSMEG_2228 Mycobacterium smegmatis str. MC2 155 oxidoreductase, short chain dehydrogenase/reductase YP_886580.1 2306091 D 246196 CDS YP_886581.1 118473667 4531238 2307025..2307846 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2307846 4531238 MSMEG_2229 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_886581.1 2307025 D 246196 CDS YP_886582.1 118472599 4536877 2307861..2309111 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 2309111 4536877 MSMEG_2230 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_886582.1 2307861 D 246196 CDS YP_886583.1 118471003 4533496 2309115..2310743 1 NC_008596.1 activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence; acyl-CoA synthetase 2310743 4533496 MSMEG_2231 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_886583.1 2309115 D 246196 CDS YP_886584.1 118470798 4536082 2310740..2311594 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 2311594 4536082 MSMEG_2232 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_886584.1 2310740 D 246196 CDS YP_886585.1 118471708 4536433 2311599..2312648 1 NC_008596.1 identified by match to protein family HMM PF00441; acyl-CoA dehydrogenase 2312648 4536433 MSMEG_2233 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_886585.1 2311599 D 246196 CDS YP_886586.1 118468783 4535674 2312674..2313864 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 2313864 4535674 MSMEG_2234 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_886586.1 2312674 D 246196 CDS YP_886587.1 118469598 4531103 complement(2313886..2315121) 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 2315121 4531103 MSMEG_2235 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_886587.1 2313886 R 246196 CDS YP_886588.1 118471652 4536489 complement(2315214..2316362) 1 NC_008596.1 identified by match to protein family HMM PF02803; thiolase 2316362 4536489 MSMEG_2236 Mycobacterium smegmatis str. MC2 155 thiolase YP_886588.1 2315214 R 246196 CDS YP_886589.1 118470158 4534336 2316524..2318806 1 NC_008596.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; anaerobic dehydrogenase 2318806 4534336 MSMEG_2237 Mycobacterium smegmatis str. MC2 155 anaerobic dehydrogenase YP_886589.1 2316524 D 246196 CDS YP_886590.1 118467498 4537385 2318803..2320329 1 NC_008596.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 2320329 4537385 MSMEG_2238 Mycobacterium smegmatis str. MC2 155 aldehyde dehydrogenase YP_886590.1 2318803 D 246196 CDS YP_886591.1 118472163 4535689 complement(2320363..2321103) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2321103 4535689 MSMEG_2239 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886591.1 2320363 R 246196 CDS YP_886592.1 118468717 4532787 complement(2321106..2322314) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 2322314 4532787 MSMEG_2240 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_886592.1 2321106 R 246196 CDS YP_886593.1 118472791 4533134 2322534..2324021 1 NC_008596.1 identified by match to protein family HMM PF00171; coniferyl aldehyde dehydrogenase 2324021 4533134 MSMEG_2242 Mycobacterium smegmatis str. MC2 155 coniferyl aldehyde dehydrogenase YP_886593.1 2322534 D 246196 CDS YP_886594.1 118473410 4537397 complement(2324005..2325657) 1 NC_008596.1 activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence; acyl-CoA synthetase 2325657 4537397 MSMEG_2241 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_886594.1 2324005 R 246196 CDS YP_886595.1 118470827 4532513 complement(2325677..2326282) 1 NC_008596.1 identified by match to protein family HMM PF00857; isochorismatase 2326282 4532513 MSMEG_2243 Mycobacterium smegmatis str. MC2 155 isochorismatase YP_886595.1 2325677 R 246196 CDS YP_886596.1 118471541 4537622 complement(2326291..2327307) 1 NC_008596.1 identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein 2327307 4537622 MSMEG_2244 Mycobacterium smegmatis str. MC2 155 Rieske (2Fe-2S) domain-containing protein YP_886596.1 2326291 R 246196 CDS YP_886597.1 118472250 4531559 2327539..2327985 1 NC_008596.1 bile-acid 7-alpha dehydratase 2327985 4531559 MSMEG_2245 Mycobacterium smegmatis str. MC2 155 bile-acid 7-alpha dehydratase YP_886597.1 2327539 D 246196 CDS YP_886598.1 118469653 4535063 complement(2327988..2328650) 1 NC_008596.1 hypothetical protein 2328650 4535063 MSMEG_2246 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886598.1 2327988 R 246196 CDS YP_886599.1 118469516 4536720 2328800..2329819 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; dihydrokaempferol 4-reductase 2329819 4536720 MSMEG_2247 Mycobacterium smegmatis str. MC2 155 dihydrokaempferol 4-reductase YP_886599.1 2328800 D 246196 CDS YP_886600.1 118468661 4535237 2329816..2330946 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 2330946 4535237 MSMEG_2249 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886600.1 2329816 D 246196 CDS YP_886601.1 118473612 4531047 complement(2330943..2333096) 1 NC_008596.1 identified by match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730; match to protein family HMM TIGR00229; two-component system sensor kinase 2333096 4531047 MSMEG_2248 Mycobacterium smegmatis str. MC2 155 two-component system sensor kinase YP_886601.1 2330943 R 246196 CDS YP_886602.1 118469312 4533377 2333091..2333234 1 NC_008596.1 hypothetical protein 2333234 4533377 MSMEG_2250 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886602.1 2333091 D 246196 CDS YP_886603.1 118471686 4536448 2333298..2333648 1 NC_008596.1 identified by match to protein family HMM PF00072; nitrate/nitrite response regulator protein 2333648 4536448 MSMEG_2251 Mycobacterium smegmatis str. MC2 155 nitrate/nitrite response regulator protein YP_886603.1 2333298 D 246196 CDS YP_886604.1 118469841 4532732 2333717..2335201 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01494; flavin-type hydroxylase 2335201 4532732 MSMEG_2252 Mycobacterium smegmatis str. MC2 155 flavin-type hydroxylase YP_886604.1 2333717 D 246196 CDS YP_886605.1 118470022 4531637 complement(2335246..2335527) 1 NC_008596.1 hypothetical protein 2335527 4531637 MSMEG_2253 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886605.1 2335246 R 246196 CDS YP_886606.1 118471608 4536520 2335507..2336553 1 NC_008596.1 identified by match to protein family HMM PF00190; match to protein family HMM PF07883; oxalate decarboxylase OxdC 2336553 4536520 MSMEG_2254 Mycobacterium smegmatis str. MC2 155 oxalate decarboxylase OxdC YP_886606.1 2335507 D 246196 CDS YP_886607.1 118469759 4532823 complement(2336583..2338136) 1 NC_008596.1 identified by match to protein family HMM PF01039; carboxyl transferase domain-containing protein 2338136 4532823 MSMEG_2255 Mycobacterium smegmatis str. MC2 155 carboxyl transferase domain-containing protein YP_886607.1 2336583 R 246196 CDS YP_886608.1 118470808 4531918 2338240..2339292 1 NC_008596.1 hypothetical protein 2339292 4531918 MSMEG_2256 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886608.1 2338240 D 246196 CDS YP_886609.1 118470788 4536071 2339303..2340538 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450-terp 2340538 4536071 MSMEG_2257 Mycobacterium smegmatis str. MC2 155 cytochrome P450-terp YP_886609.1 2339303 D 246196 CDS YP_886610.1 118470084 4532959 complement(2340549..2340752) 1 NC_008596.1 hypothetical protein 2340752 4532959 MSMEG_2258 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886610.1 2340549 R 246196 CDS YP_886611.1 118468633 4533565 complement(2340686..2342992) 1 NC_008596.1 identified by match to protein family HMM PF02554; carbon starvation protein A 2342992 4533565 MSMEG_2259 Mycobacterium smegmatis str. MC2 155 carbon starvation protein A YP_886611.1 2340686 R 246196 CDS YP_886612.1 118470190 4530825 complement(2343165..2344226) 1 NC_008596.1 identified by match to protein family HMM PF00165; transcriptional regulator 2344226 4530825 MSMEG_2260 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_886612.1 2343165 R 246196 CDS YP_886613.1 118470532 4536124 2344455..2345024 1 NC_008596.1 hypothetical protein 2345024 4536124 MSMEG_2261 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886613.1 2344455 D 246196 CDS YP_886614.1 118473653 4533521 2345095..2346066 1 NC_008596.1 identified by match to protein family HMM PF01058; hydrogenase-2, small subunit 2346066 hybA 4533521 hybA Mycobacterium smegmatis str. MC2 155 hydrogenase-2, small subunit YP_886614.1 2345095 D 246196 CDS YP_886615.1 118472926 4531215 2346098..2347705 1 NC_008596.1 identified by match to protein family HMM PF00374; hydrogenase-2, large subunit 2347705 hybC 4531215 hybC Mycobacterium smegmatis str. MC2 155 hydrogenase-2, large subunit YP_886615.1 2346098 D 246196 CDS YP_886616.1 118473478 4531182 2347746..2348543 1 NC_008596.1 identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072; peptidase M52, hydrogen uptake protein 2348543 4531182 MSMEG_2264 Mycobacterium smegmatis str. MC2 155 peptidase M52, hydrogen uptake protein YP_886616.1 2347746 D 246196 CDS YP_886617.1 118468339 4532090 2348549..2348812 1 NC_008596.1 hypothetical protein 2348812 4532090 MSMEG_2266 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886617.1 2348549 D 246196 CDS YP_886618.1 118468161 4535033 complement(2348802..2350169) 1 NC_008596.1 hypothetical protein 2350169 4535033 MSMEG_2265 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886618.1 2348802 R 246196 CDS YP_886619.1 118467850 4535477 2348829..2350079 1 NC_008596.1 hypothetical protein 2350079 4535477 MSMEG_2267 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886619.1 2348829 D 246196 CDS YP_886620.1 118470355 4534630 2350076..2350963 1 NC_008596.1 identified by match to protein family HMM PF00355; match to protein family HMM PF01106; hypothetical protein 2350963 4534630 MSMEG_2268 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886620.1 2350076 D 246196 CDS YP_886621.1 118469590 4531095 2350975..2352150 1 NC_008596.1 identified by match to protein family HMM PF01436; hypothetical protein 2352150 4531095 MSMEG_2269 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886621.1 2350975 D 246196 CDS YP_886622.1 118472906 4533775 2352162..2352983 1 NC_008596.1 hypothetical protein 2352983 4533775 MSMEG_2270 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886622.1 2352162 D 246196 CDS YP_886623.1 118467565 4535519 complement(2352990..2353769) 1 NC_008596.1 identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073; hydrogenase nickel incorporation protein HypB 2353769 hypB 4535519 hypB Mycobacterium smegmatis str. MC2 155 hydrogenase nickel incorporation protein HypB YP_886623.1 2352990 R 246196 CDS YP_886624.1 118469892 4533211 complement(2353782..2354117) 1 NC_008596.1 identified by match to protein family HMM PF01155; hydrogenase nickel incorporation protein HypA 2354117 hypA 4533211 hypA Mycobacterium smegmatis str. MC2 155 hydrogenase nickel incorporation protein HypA YP_886624.1 2353782 R 246196 CDS YP_886625.1 118469158 4534744 2354278..2356566 1 NC_008596.1 identified by match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HMM TIGR00143; [NiFe] hydrogenase maturation protein HypF 2356566 hypF 4534744 hypF Mycobacterium smegmatis str. MC2 155 [NiFe] hydrogenase maturation protein HypF YP_886625.1 2354278 D 246196 CDS YP_886626.1 118467704 4537711 2356566..2356826 1 NC_008596.1 identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074; hydrogenase assembly chaperone HypC/HupF 2356826 hypC 4537711 hypC Mycobacterium smegmatis str. MC2 155 hydrogenase assembly chaperone HypC/HupF YP_886626.1 2356566 D 246196 CDS YP_886627.1 118469262 4531555 2356823..2357926 1 NC_008596.1 identified by match to protein family HMM PF01924; match to protein family HMM TIGR00075; hydrogenase expression/formation protein HypD 2357926 hypD 4531555 hypD Mycobacterium smegmatis str. MC2 155 hydrogenase expression/formation protein HypD YP_886627.1 2356823 D 246196 CDS YP_886628.1 118470004 4532742 2357919..2358992 1 NC_008596.1 identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124; hydrogenase expression/formation protein HypE 2358992 hypE 4532742 hypE Mycobacterium smegmatis str. MC2 155 hydrogenase expression/formation protein HypE YP_886628.1 2357919 D 246196 CDS YP_886629.1 118471939 4536201 complement(2358993..2360522) 1 NC_008596.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase 2360522 ligB 4536201 ligB Mycobacterium smegmatis str. MC2 155 ATP-dependent DNA ligase YP_886629.1 2358993 R 246196 CDS YP_886630.1 118472701 4531669 complement(2360646..2362238) 1 NC_008596.1 identified by match to protein family HMM PF00174; match to protein family HMM PF03404; membrane-bound oxidoreductase 2362238 4531669 MSMEG_2278 Mycobacterium smegmatis str. MC2 155 membrane-bound oxidoreductase YP_886630.1 2360646 R 246196 CDS YP_886631.1 118468754 4534243 2362387..2363154 1 NC_008596.1 identified by match to protein family HMM PF00106; 3-hydroxyacyl-CoA dehydrogenase 2363154 4534243 MSMEG_2279 Mycobacterium smegmatis str. MC2 155 3-hydroxyacyl-CoA dehydrogenase YP_886631.1 2362387 D 246196 CDS YP_886632.1 118468802 4535320 2363217..2364947 1 NC_008596.1 catalyzes the formation of acetate from pyruvate; pyruvate dehydrogenase 2364947 4535320 MSMEG_2280 Mycobacterium smegmatis str. MC2 155 pyruvate dehydrogenase YP_886632.1 2363217 D 246196 CDS YP_886633.1 118473577 4531011 2365655..2366356 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 2366356 4531011 MSMEG_2282 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_886633.1 2365655 D 246196 CDS YP_886634.1 118472208 4530866 complement(2366364..2367686) 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 2367686 4530866 MSMEG_2283 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_886634.1 2366364 R 246196 CDS YP_886635.1 118471121 4533480 2368080..2368895 1 NC_008596.1 identified by match to protein family HMM PF01170; methyltransferase type 11 2368895 4533480 MSMEG_2285 Mycobacterium smegmatis str. MC2 155 methyltransferase type 11 YP_886635.1 2368080 D 246196 CDS YP_886636.1 118468716 4532786 2368918..2369979 1 NC_008596.1 identified by match to protein family HMM PF01636; aminoglycoside phosphotransferase 2369979 4532786 MSMEG_2286 Mycobacterium smegmatis str. MC2 155 aminoglycoside phosphotransferase YP_886636.1 2368918 D 246196 CDS YP_886637.1 118470479 4536790 complement(2370008..2370769) 1 NC_008596.1 identified by match to protein family HMM PF01925; transporter 2370769 4536790 MSMEG_2287 Mycobacterium smegmatis str. MC2 155 transporter YP_886637.1 2370008 R 246196 CDS YP_886638.1 118467928 4532661 2370961..2371452 1 NC_008596.1 hypothetical protein 2371452 4532661 MSMEG_2288 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886638.1 2370961 D 246196 CDS YP_886639.1 118468969 4533533 complement(2371548..2373032) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome p450 2373032 4533533 MSMEG_2289 Mycobacterium smegmatis str. MC2 155 cytochrome p450 YP_886639.1 2371548 R 246196 CDS YP_886640.1 118467960 4532071 2373164..2373823 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2373823 4532071 MSMEG_2290 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886640.1 2373164 D 246196 CDS YP_886641.1 118473064 4534616 2373847..2374710 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 2374710 4534616 MSMEG_2291 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_886641.1 2373847 D 246196 CDS YP_886642.1 118468202 4536643 complement(2374713..2376248) 1 NC_008596.1 identified by match to protein family HMM PF00245; alkaline phosphatase 2376248 4536643 MSMEG_2292 Mycobacterium smegmatis str. MC2 155 alkaline phosphatase YP_886642.1 2374713 R 246196 CDS YP_886643.1 118470142 4531701 complement(2376350..2377534) 1 NC_008596.1 hypothetical protein 2377534 4531701 MSMEG_2293 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886643.1 2376350 R 246196 CDS YP_886644.1 118467809 4535986 complement(2377545..2378615) 1 NC_008596.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 2378615 dinB 4535986 dinB Mycobacterium smegmatis str. MC2 155 DNA polymerase IV YP_886644.1 2377545 R 246196 CDS YP_886645.1 118468360 4533959 complement(2378620..2379234) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2379234 4533959 MSMEG_2295 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886645.1 2378620 R 246196 CDS YP_886646.1 118470117 4534488 2379342..2379905 1 NC_008596.1 identified by match to protein family HMM PF02525; match to protein family HMM PF03358; hypothetical protein 2379905 4534488 MSMEG_2296 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886646.1 2379342 D 246196 CDS YP_886647.1 118472864 4531348 2380379..2380618 1 NC_008596.1 identified by match to protein family HMM PF00462; match to protein family HMM TIGR02194; glutaredoxin 2380618 4531348 MSMEG_2297 Mycobacterium smegmatis str. MC2 155 glutaredoxin YP_886647.1 2380379 D 246196 CDS YP_886648.1 118468034 4531391 2381113..2383233 1 NC_008596.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2383233 4531391 MSMEG_2299 Mycobacterium smegmatis str. MC2 155 ribonucleotide-diphosphate reductase subunit alpha YP_886648.1 2381113 D 246196 CDS YP_886649.1 118473406 4537024 complement(2384537..2384956) 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase/bleomycin resistance protein/dioxygenase 2384956 4537024 MSMEG_2301 Mycobacterium smegmatis str. MC2 155 glyoxalase/bleomycin resistance protein/dioxygenase YP_886649.1 2384537 R 246196 CDS YP_886650.1 118472971 4532310 complement(2385126..2385353) 1 NC_008596.1 hypothetical protein 2385353 4532310 MSMEG_2302 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886650.1 2385126 R 246196 CDS YP_886651.1 118471950 4536174 2385228..2386637 1 NC_008596.1 identified by match to protein family HMM PF07690; integral membrane transporter 2386637 4536174 MSMEG_2303 Mycobacterium smegmatis str. MC2 155 integral membrane transporter YP_886651.1 2385228 D 246196 CDS YP_886652.1 118473733 4536967 2386634..2386777 1 NC_008596.1 hypothetical protein 2386777 4536967 MSMEG_2304 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886652.1 2386634 D 246196 CDS YP_886653.1 118470120 4534491 2386828..2387679 1 NC_008596.1 identified by match to protein family HMM PF00583; acetyltransferase 2387679 4534491 MSMEG_2306 Mycobacterium smegmatis str. MC2 155 acetyltransferase YP_886653.1 2386828 D 246196 CDS YP_886654.1 118470894 4537199 complement(2387651..2388226) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2388226 4537199 MSMEG_2305 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886654.1 2387651 R 246196 CDS YP_886655.1 118473463 4534907 2388350..2389228 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 2389228 4534907 MSMEG_2307 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886655.1 2388350 D 246196 CDS YP_886656.1 118467508 4537395 complement(2389298..2390485) 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM TIGR02032; geranylgeranyl reductase 2390485 4537395 MSMEG_2308 Mycobacterium smegmatis str. MC2 155 geranylgeranyl reductase YP_886656.1 2389298 R 246196 CDS YP_886657.1 118472865 4531349 2390636..2391373 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulatory protein 2391373 4531349 MSMEG_2309 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_886657.1 2390636 D 246196 CDS YP_886658.1 118472797 4533140 2391489..2392988 1 NC_008596.1 monooxygenase 2392988 4533140 MSMEG_2310 Mycobacterium smegmatis str. MC2 155 monooxygenase YP_886658.1 2391489 D 246196 CDS YP_886659.1 118472094 4537103 2393083..2393598 1 NC_008596.1 hypothetical protein 2393598 4537103 MSMEG_2311 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886659.1 2393083 D 246196 CDS YP_886660.1 118468620 4535018 2393652..2393801 1 NC_008596.1 hypothetical protein 2393801 4535018 MSMEG_2312 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886660.1 2393652 D 246196 CDS YP_886661.1 118469232 4535368 2393815..2394789 1 NC_008596.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 2394789 nrdF2 4535368 nrdF2 Mycobacterium smegmatis str. MC2 155 ribonucleotide-diphosphate reductase subunit beta YP_886661.1 2393815 D 246196 CDS YP_886662.1 118470751 4533654 2394859..2396241 1 NC_008596.1 identified by match to protein family HMM PF00756; esterase 2396241 4533654 MSMEG_2314 Mycobacterium smegmatis str. MC2 155 esterase YP_886662.1 2394859 D 246196 CDS YP_886663.1 118471879 4536255 2396241..2397821 1 NC_008596.1 hypothetical protein 2397821 4536255 MSMEG_2315 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886663.1 2396241 D 246196 CDS YP_886664.1 118468910 4537072 complement(2399432..2400481) 1 NC_008596.1 identified by match to protein family HMM PF00107; alcohol dehydrogenase 2400481 4537072 MSMEG_2317 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_886664.1 2399432 R 246196 CDS YP_886665.1 118468488 4537677 complement(2400669..2400944) 1 NC_008596.1 identified by match to protein family HMM PF03795; GTP cyclohydrolase II 2400944 4537677 MSMEG_2318 Mycobacterium smegmatis str. MC2 155 GTP cyclohydrolase II YP_886665.1 2400669 R 246196 CDS YP_886666.1 118472378 4534768 complement(2400954..2402027) 1 NC_008596.1 identified by match to protein family HMM PF01497; periplasmic binding protein 2402027 4534768 MSMEG_2319 Mycobacterium smegmatis str. MC2 155 periplasmic binding protein YP_886666.1 2400954 R 246196 CDS YP_886667.1 118467697 4537335 2404009..2405250 1 NC_008596.1 identified by match to protein family HMM PF00702; match to protein family HMM PF01842; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488; phosphoserine phosphatase 2405250 serB 4537335 serB Mycobacterium smegmatis str. MC2 155 phosphoserine phosphatase YP_886667.1 2404009 D 246196 CDS YP_886668.1 118473664 4531235 2405378..2405671 1 NC_008596.1 hypothetical protein 2405671 4531235 MSMEG_2322 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886668.1 2405378 D 246196 CDS YP_886669.1 118467959 4532070 complement(2405673..2407112) 1 NC_008596.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator 2407112 4532070 MSMEG_2323 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_886669.1 2405673 R 246196 CDS YP_886670.1 118470005 4532743 2407176..2407322 1 NC_008596.1 hypothetical protein 2407322 4532743 MSMEG_2324 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886670.1 2407176 D 246196 CDS YP_886671.1 118467458 4536603 2407319..2408014 1 NC_008596.1 identified by match to protein family HMM PF02588; integral membrane protein 2408014 4536603 MSMEG_2325 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_886671.1 2407319 D 246196 CDS YP_886672.1 118468212 4536654 2407969..2408817 1 NC_008596.1 identified by match to protein family HMM PF00005; molybdenum ABC transporter ATPase 2408817 4536654 MSMEG_2326 Mycobacterium smegmatis str. MC2 155 molybdenum ABC transporter ATPase YP_886672.1 2407969 D 246196 CDS YP_886673.1 118471036 4536738 2408810..2409631 1 NC_008596.1 identified by match to protein family HMM PF00293; nudix hydrolase 2409631 4536738 MSMEG_2327 Mycobacterium smegmatis str. MC2 155 nudix hydrolase YP_886673.1 2408810 D 246196 CDS YP_886674.1 118471805 4536337 2409628..2410335 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2410335 4536337 MSMEG_2328 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_886674.1 2409628 D 246196 CDS YP_886675.1 118467769 4533400 2410370..2411350 1 NC_008596.1 UbiE/COQ5 family methyltransferase 2411350 4533400 MSMEG_2329 Mycobacterium smegmatis str. MC2 155 UbiE/COQ5 family methyltransferase YP_886675.1 2410370 D 246196 CDS YP_886676.1 118468767 4535658 2411359..2412522 1 NC_008596.1 SAM-dependent methyltransferase 2412522 4535658 MSMEG_2330 Mycobacterium smegmatis str. MC2 155 SAM-dependent methyltransferase YP_886676.1 2411359 D 246196 CDS YP_886677.1 118473177 4532579 2412595..2413296 1 NC_008596.1 hypothetical protein 2413296 4532579 MSMEG_2331 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886677.1 2412595 D 246196 CDS YP_886678.1 118473474 4531176 complement(2413328..2414872) 1 NC_008596.1 identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; amino acid carrier protein 2414872 4531176 MSMEG_2332 Mycobacterium smegmatis str. MC2 155 amino acid carrier protein YP_886678.1 2413328 R 246196 CDS YP_886679.1 118470749 4533652 2414879..2415001 1 NC_008596.1 hypothetical protein 2415001 4533652 MSMEG_2334 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886679.1 2414879 D 246196 CDS YP_886680.1 118468753 4534242 complement(2414990..2416273) 1 NC_008596.1 hypothetical protein 2416273 4534242 MSMEG_2333 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886680.1 2414990 R 246196 CDS YP_886681.1 118470634 4532393 2416370..2417113 1 NC_008596.1 identified by match to protein family HMM PF00132; hexapeptide transferase 2417113 4532393 MSMEG_2335 Mycobacterium smegmatis str. MC2 155 hexapeptide transferase YP_886681.1 2416370 D 246196 CDS YP_886682.1 118467490 4537377 2417887..2418912 1 NC_008596.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase 2418912 fni 4537377 fni Mycobacterium smegmatis str. MC2 155 isopentenyl pyrophosphate isomerase YP_886682.1 2417887 D 246196 CDS YP_886683.1 118468591 4532718 2418945..2419571 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 2419571 4532718 MSMEG_2338 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_886683.1 2418945 D 246196 CDS YP_886684.1 118473111 4531837 complement(2419579..2420901) 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 2420901 4531837 MSMEG_2339 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_886684.1 2419579 R 246196 CDS YP_886685.1 118473370 4530847 2420692..2421201 1 NC_008596.1 hypothetical protein 2421201 4530847 MSMEG_2340 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886685.1 2420692 D 246196 CDS YP_886686.1 118469957 4530920 2421207..2422448 1 NC_008596.1 identified by match to protein family HMM PF00201; match to protein family HMM PF03033; match to protein family HMM TIGR01426; glycosyltransferase 2422448 4530920 MSMEG_2342 Mycobacterium smegmatis str. MC2 155 glycosyltransferase YP_886686.1 2421207 D 246196 CDS YP_886687.1 118472176 4533714 complement(2422408..2422818) 1 NC_008596.1 hypothetical protein 2422818 4533714 MSMEG_2341 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886687.1 2422408 R 246196 CDS YP_886688.1 118472710 4531678 complement(2422826..2423842) 1 NC_008596.1 identified by match to protein family HMM PF00355; methylesterase 2423842 4531678 MSMEG_2343 Mycobacterium smegmatis str. MC2 155 methylesterase YP_886688.1 2422826 R 246196 CDS YP_886689.1 118470487 4537171 complement(2423839..2425356) 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01593; dehydrogenase 2425356 4537171 MSMEG_2344 Mycobacterium smegmatis str. MC2 155 dehydrogenase YP_886689.1 2423839 R 246196 CDS YP_886690.1 118468542 4536093 complement(2426030..2426977) 1 NC_008596.1 identified by match to protein family HMM PF00494; phytoene synthase 2426977 4536093 MSMEG_2346 Mycobacterium smegmatis str. MC2 155 phytoene synthase YP_886690.1 2426030 R 246196 CDS YP_886691.1 118472766 4531857 complement(2426974..2428527) 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734; phytoene dehydrogenase 2428527 4531857 MSMEG_2347 Mycobacterium smegmatis str. MC2 155 phytoene dehydrogenase YP_886691.1 2426974 R 246196 CDS YP_886692.1 118469272 4532242 complement(2430027..2431571) 1 NC_008596.1 identified by match to protein family HMM PF03065; glycosyl hydrolase family protein 2431571 4532242 MSMEG_2349 Mycobacterium smegmatis str. MC2 155 glycosyl hydrolase family protein YP_886692.1 2430027 R 246196 CDS YP_886693.1 118469928 4535839 complement(2431568..2432341) 1 NC_008596.1 hypothetical protein 2432341 4535839 MSMEG_2350 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886693.1 2431568 R 246196 CDS YP_886694.1 118469254 4531546 2432570..2433361 1 NC_008596.1 identified by similarity to SP:O85691; match to protein family HMM PF01012; electron transfer flavoprotein subunit beta 2433361 etfB 4531546 etfB Mycobacterium smegmatis str. MC2 155 electron transfer flavoprotein subunit beta YP_886694.1 2432570 D 246196 CDS YP_886695.1 118471409 4534885 2433444..2434385 1 NC_008596.1 identified by similarity to SP:P38974; match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein subunit alpha 2434385 etfA 4534885 etfA Mycobacterium smegmatis str. MC2 155 electron transfer flavoprotein subunit alpha YP_886695.1 2433444 D 246196 CDS YP_886696.1 118471398 4534873 2434550..2435293 1 NC_008596.1 identified by match to protein family HMM PF01113; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; hypothetical protein 2435293 4534873 MSMEG_2353 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886696.1 2434550 D 246196 CDS YP_886697.1 118473418 4537405 2435295..2435942 1 NC_008596.1 identified by match to protein family HMM PF00881; oxidoreductase 2435942 4537405 MSMEG_2354 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_886697.1 2435295 D 246196 CDS YP_886698.1 118472732 4532361 2436064..2436912 1 NC_008596.1 hypothetical protein 2436912 4532361 MSMEG_2355 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886698.1 2436064 D 246196 CDS YP_886699.1 118468036 4531393 2436909..2437739 1 NC_008596.1 identified by match to protein family HMM PF01553; acyltransferase 2437739 4531393 MSMEG_2356 Mycobacterium smegmatis str. MC2 155 acyltransferase YP_886699.1 2436909 D 246196 CDS YP_886700.1 118472459 4533600 2437787..2438995 1 NC_008596.1 identified by match to protein family HMM PF00266; match to protein family HMM PF01212; cysteine desulfurase 2438995 4533600 MSMEG_2357 Mycobacterium smegmatis str. MC2 155 cysteine desulfurase YP_886700.1 2437787 D 246196 CDS YP_886701.1 118473593 4534866 2438992..2440062 1 NC_008596.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2440062 mnmA 4534866 mnmA Mycobacterium smegmatis str. MC2 155 tRNA-specific 2-thiouridylase MnmA YP_886701.1 2438992 D 246196 CDS YP_886702.1 118472619 4537269 2440088..2441098 1 NC_008596.1 identified by match to protein family HMM PF01717; methionine synthase, vitamin-B12 independent 2441098 4537269 MSMEG_2359 Mycobacterium smegmatis str. MC2 155 methionine synthase, vitamin-B12 independent YP_886702.1 2440088 D 246196 CDS YP_886703.1 118469708 4537213 complement(2441100..2442674) 1 NC_008596.1 identified by match to protein family HMM PF00501; 4-coumarate--CoA ligase 2442674 4537213 MSMEG_2360 Mycobacterium smegmatis str. MC2 155 4-coumarate--CoA ligase YP_886703.1 2441100 R 246196 CDS YP_886704.1 118470649 4532408 complement(2442671..2443087) 1 NC_008596.1 phosphoribosylglycinamide formyltransferase 2443087 4532408 MSMEG_2361 Mycobacterium smegmatis str. MC2 155 phosphoribosylglycinamide formyltransferase YP_886704.1 2442671 R 246196 CDS YP_886705.1 118470314 4535192 2443172..2445277 1 NC_008596.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 2445277 ligA 4535192 ligA Mycobacterium smegmatis str. MC2 155 NAD-dependent DNA ligase LigA YP_886705.1 2443172 D 246196 CDS YP_886706.1 118471598 4536549 complement(2445348..2446007) 1 NC_008596.1 identified by match to protein family HMM PF01842; amino acid-binding protein 2446007 4536549 MSMEG_2363 Mycobacterium smegmatis str. MC2 155 amino acid-binding protein YP_886706.1 2445348 R 246196 CDS YP_886707.1 118473359 4530835 2446108..2446407 1 NC_008596.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 2446407 gatC 4530835 gatC Mycobacterium smegmatis str. MC2 155 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_886707.1 2446108 D 246196 CDS YP_886708.1 118472463 4533829 2446404..2447888 1 NC_008596.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 2447888 gatA 4533829 gatA Mycobacterium smegmatis str. MC2 155 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_886708.1 2446404 D 246196 CDS YP_004191801.1 320154520 4536564 2447932..>2448964 1 NC_008596.1 6-phosphofructokinase >2448964 4536564 MSMEG_2366 Mycobacterium smegmatis str. MC2 155 6-phosphofructokinase YP_004191801.1 2447932 D 246196 CDS YP_886709.1 118472149 4532486 2449026..2450537 1 NC_008596.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 2450537 gatB 4532486 gatB Mycobacterium smegmatis str. MC2 155 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_886709.1 2449026 D 246196 CDS YP_886710.1 118473575 4531009 complement(2450596..2451234) 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 2451234 4531009 MSMEG_2368 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_886710.1 2450596 R 246196 CDS YP_886711.1 118468293 4533051 complement(2451352..2452446) 1 NC_008596.1 LppZ protein 2452446 4533051 MSMEG_2369 Mycobacterium smegmatis str. MC2 155 LppZ protein YP_886711.1 2451352 R 246196 CDS YP_886712.1 118469364 4535878 2452620..2453462 1 NC_008596.1 identified by match to protein family HMM PF07681; DoxX subfamily protein 2453462 4535878 MSMEG_2370 Mycobacterium smegmatis str. MC2 155 DoxX subfamily protein YP_886712.1 2452620 D 246196 CDS YP_886713.1 118470748 4533651 complement(2453493..2453882) 1 NC_008596.1 low molecular weight protein antigen 6 2453882 4533651 MSMEG_2371 Mycobacterium smegmatis str. MC2 155 low molecular weight protein antigen 6 YP_886713.1 2453493 R 246196 CDS YP_886714.1 118472921 4531210 2454205..2456061 1 NC_008596.1 acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 1 catalytic subunit 2456061 ilvB 4531210 ilvB Mycobacterium smegmatis str. MC2 155 acetolactate synthase 1 catalytic subunit YP_886714.1 2454205 D 246196 CDS YP_886715.1 118470606 4532109 2456125..2456637 1 NC_008596.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 2456637 ilvH 4532109 ilvH Mycobacterium smegmatis str. MC2 155 acetolactate synthase 3 regulatory subunit YP_886715.1 2456125 D 246196 CDS YP_886716.1 118472182 4533720 2456694..2457707 1 NC_008596.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2457707 ilvC 4533720 ilvC Mycobacterium smegmatis str. MC2 155 ketol-acid reductoisomerase YP_886716.1 2456694 D 246196 CDS YP_886717.1 118473744 4537349 complement(2457779..2458390) 1 NC_008596.1 identified by match to protein family HMM PF00258; match to protein family HMM PF03358; match to protein family HMM TIGR01755; NAD(P)H:quinone oxidoreductase, type IV 2458390 wrbA 4537349 wrbA Mycobacterium smegmatis str. MC2 155 NAD(P)H:quinone oxidoreductase, type IV YP_886717.1 2457779 R 246196 CDS YP_886718.1 118468384 4532933 complement(2458418..2458879) 1 NC_008596.1 hypothetical protein 2458879 4532933 MSMEG_2376 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886718.1 2458418 R 246196 CDS YP_886719.1 118469788 4535812 complement(2458912..2460336) 1 NC_008596.1 P49 protein 2460336 4535812 MSMEG_2377 Mycobacterium smegmatis str. MC2 155 P49 protein YP_886719.1 2458912 R 246196 CDS YP_886720.1 118471239 4534426 2460414..2462000 1 NC_008596.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 2462000 serA 4534426 serA Mycobacterium smegmatis str. MC2 155 D-3-phosphoglycerate dehydrogenase YP_886720.1 2460414 D 246196 CDS YP_886721.1 118469173 4534280 2461997..2463019 1 NC_008596.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 2463019 leuB 4534280 leuB Mycobacterium smegmatis str. MC2 155 3-isopropylmalate dehydrogenase YP_886721.1 2461997 D 246196 CDS YP_886722.1 118473624 4531020 complement(2463113..2464348) 1 NC_008596.1 identified by match to protein family HMM PF07690; sugar transporter family protein 2464348 4531020 MSMEG_2380 Mycobacterium smegmatis str. MC2 155 sugar transporter family protein YP_886722.1 2463113 R 246196 CDS YP_886723.1 118472890 4534033 2464399..2465580 1 NC_008596.1 hypothetical protein 2465580 4534033 MSMEG_2381 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886723.1 2464399 D 246196 CDS YP_886724.1 118472218 4531468 2465631..2466410 1 NC_008596.1 identified by match to protein family HMM PF01557; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2466410 4531468 MSMEG_2382 Mycobacterium smegmatis str. MC2 155 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_886724.1 2465631 D 246196 CDS YP_886725.1 118472003 4533604 2466407..2467867 1 NC_008596.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 2467867 gltX 4533604 gltX Mycobacterium smegmatis str. MC2 155 glutamyl-tRNA synthetase YP_886725.1 2466407 D 246196 CDS YP_886726.1 118467638 4534213 complement(2468381..2469082) 1 NC_008596.1 identified by match to protein family HMM PF01614; IclR family transcriptional regulator 2469082 4534213 MSMEG_2386 Mycobacterium smegmatis str. MC2 155 IclR family transcriptional regulator YP_886726.1 2468381 R 246196 CDS YP_886727.1 118469198 4535787 2469194..2470648 1 NC_008596.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2470648 leuC 4535787 leuC Mycobacterium smegmatis str. MC2 155 isopropylmalate isomerase large subunit YP_886727.1 2469194 D 246196 CDS YP_886728.1 118470522 4536114 2470672..2471265 1 NC_008596.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 2471265 leuD 4536114 leuD Mycobacterium smegmatis str. MC2 155 isopropylmalate isomerase small subunit YP_886728.1 2470672 D 246196 CDS YP_886729.1 118471339 4534852 2471469..2472095 1 NC_008596.1 identified by match to protein family HMM PF00216; DNA-binding protein HU 2472095 hup 4534852 hup Mycobacterium smegmatis str. MC2 155 DNA-binding protein HU YP_886729.1 2471469 D 246196 CDS YP_886730.1 118472610 4536888 complement(2472156..2473124) 1 NC_008596.1 identified by match to protein family HMM PF00293; match to protein family HMM PF00300; NUDIX family hydrolase 2473124 4536888 MSMEG_2390 Mycobacterium smegmatis str. MC2 155 NUDIX family hydrolase YP_886730.1 2472156 R 246196 CDS YP_886731.1 118469835 4532726 complement(2473142..2475352) 1 NC_008596.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 2475352 ppk 4532726 ppk Mycobacterium smegmatis str. MC2 155 polyphosphate kinase YP_886731.1 2473142 R 246196 CDS YP_886732.1 118471106 4535871 complement(2475381..2476046) 1 NC_008596.1 identified by match to protein family HMM PF01983; hypothetical protein 2476046 4535871 MSMEG_2392 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886732.1 2475381 R 246196 CDS YP_886733.1 118470026 4531641 2476113..2477108 1 NC_008596.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 2477108 gpsA 4531641 gpsA Mycobacterium smegmatis str. MC2 155 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_886733.1 2476113 D 246196 CDS YP_886734.1 118471029 4534485 2477113..2478222 1 NC_008596.1 catalyzes the formation of cysteine and 2-oxobutanoate from cystathionine; cystathionine gamma-lyase 2478222 4534485 MSMEG_2394 Mycobacterium smegmatis str. MC2 155 cystathionine gamma-lyase YP_886734.1 2477113 D 246196 CDS YP_886735.1 118468335 4532086 2478371..2479492 1 NC_008596.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 2479492 ddl 4532086 ddl Mycobacterium smegmatis str. MC2 155 D-alanyl-alanine synthetase A YP_886735.1 2478371 D 246196 CDS YP_886736.1 118471058 4537131 complement(2479493..2480080) 1 NC_008596.1 hypothetical protein 2480080 4537131 MSMEG_2396 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886736.1 2479493 R 246196 CDS YP_886737.1 118472633 4537652 complement(2480097..2480333) 1 NC_008596.1 identified by match to protein family HMM PF01037; AsnC family transcriptional regulator 2480333 4537652 MSMEG_2397 Mycobacterium smegmatis str. MC2 155 AsnC family transcriptional regulator YP_886737.1 2480097 R 246196 CDS YP_886738.1 118471672 4536473 2480440..2481453 1 NC_008596.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 2481453 thiL 4536473 thiL Mycobacterium smegmatis str. MC2 155 thiamine monophosphate kinase YP_886738.1 2480440 D 246196 CDS YP_886739.1 118469778 4535802 2481480..2482163 1 NC_008596.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 2482163 ung 4535802 ung Mycobacterium smegmatis str. MC2 155 uracil-DNA glycosylase YP_886739.1 2481480 D 246196 CDS YP_886740.1 118473674 4531245 2482174..2482803 1 NC_008596.1 hypothetical protein 2482803 4531245 MSMEG_2401 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886740.1 2482174 D 246196 CDS YP_886741.1 118468800 4535318 complement(2482555..2482749) 1 NC_008596.1 required for 70S ribosome assembly; 50S ribosomal protein L28 2482749 rpmB 4535318 rpmB Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L28 YP_886741.1 2482555 R 246196 CDS YP_886742.1 118472479 4533846 2482984..2484648 1 NC_008596.1 identified by match to protein family HMM PF02734; dihydroxyacetone kinase 2484648 4533846 MSMEG_2402 Mycobacterium smegmatis str. MC2 155 dihydroxyacetone kinase YP_886742.1 2482984 D 246196 CDS YP_886743.1 118469068 4537254 2484645..2486906 1 NC_008596.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 2486906 recG 4537254 recG Mycobacterium smegmatis str. MC2 155 ATP-dependent DNA helicase RecG YP_886743.1 2484645 D 246196 CDS YP_886744.1 118467770 4533401 2486903..2487607 1 NC_008596.1 extracellular deoxyribonuclease 2487607 4533401 MSMEG_2404 Mycobacterium smegmatis str. MC2 155 extracellular deoxyribonuclease YP_886744.1 2486903 D 246196 CDS YP_886745.1 118470373 4532320 complement(2487622..2488116) 1 NC_008596.1 identified by match to protein family HMM PF00583; MarR family transcriptional regulator 2488116 4532320 MSMEG_2405 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_886745.1 2487622 R 246196 CDS YP_886746.1 118468749 4534238 2488188..2488766 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2488766 4534238 MSMEG_2406 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886746.1 2488188 D 246196 CDS YP_886747.1 118473442 4534133 complement(2488797..2489648) 1 NC_008596.1 identified by match to protein family HMM PF00248; morphine 6-dehydrogenase 2489648 4534133 MSMEG_2407 Mycobacterium smegmatis str. MC2 155 morphine 6-dehydrogenase YP_886747.1 2488797 R 246196 CDS YP_886748.1 118471723 4536409 complement(2489654..2490481) 1 NC_008596.1 identified by match to protein family HMM PF00248; 2,5-diketo-D-gluconate reductase A 2490481 4536409 MSMEG_2408 Mycobacterium smegmatis str. MC2 155 2,5-diketo-D-gluconate reductase A YP_886748.1 2489654 R 246196 CDS YP_886749.1 118468648 4533580 2490579..2491631 1 NC_008596.1 identified by match to protein family HMM PF07859; alpha/beta hydrolase 2491631 4533580 MSMEG_2409 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_886749.1 2490579 D 246196 CDS YP_886750.1 118468714 4532783 2491665..2492393 1 NC_008596.1 serine-threonine protein kinase 2492393 4532783 MSMEG_2410 Mycobacterium smegmatis str. MC2 155 serine-threonine protein kinase YP_886750.1 2491665 D 246196 CDS YP_886751.1 118472216 4531466 2492393..2493025 1 NC_008596.1 identified by match to protein family HMM PF07884; integral membrane protein 2493025 4531466 MSMEG_2411 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_886751.1 2492393 D 246196 CDS YP_886752.1 118473087 4533162 2493061..2496444 1 NC_008596.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 2496444 pyc 4533162 pyc Mycobacterium smegmatis str. MC2 155 pyruvate carboxylase YP_886752.1 2493061 D 246196 CDS YP_886753.1 118474000 4530960 2496486..2496995 1 NC_008596.1 identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095; methyltransferase 2496995 4530960 MSMEG_2413 Mycobacterium smegmatis str. MC2 155 methyltransferase YP_886753.1 2496486 D 246196 CDS YP_886754.1 118472558 4534142 2497021..2497497 1 NC_008596.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 2497497 coaD 4534142 coaD Mycobacterium smegmatis str. MC2 155 phosphopantetheine adenylyltransferase YP_886754.1 2497021 D 246196 CDS YP_886755.1 118470790 4536073 2497580..2498158 1 NC_008596.1 identified by match to protein family HMM PF01814; hemerythrin HHE cation binding protein 2498158 4536073 MSMEG_2415 Mycobacterium smegmatis str. MC2 155 hemerythrin HHE cation binding protein YP_886755.1 2497580 D 246196 CDS YP_886756.1 118467545 4536007 2498281..2499018 1 NC_008596.1 hypothetical protein 2499018 4536007 MSMEG_2416 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886756.1 2498281 D 246196 CDS YP_886757.1 118468390 4534779 2499088..2499699 1 NC_008596.1 identified by match to protein family HMM PF02620; hypothetical protein 2499699 4534779 MSMEG_2417 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886757.1 2499088 D 246196 CDS YP_886758.1 118470776 4531140 2499696..2500388 1 NC_008596.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 2500388 rnc 4531140 rnc Mycobacterium smegmatis str. MC2 155 ribonuclease III YP_886758.1 2499696 D 246196 CDS YP_886759.1 118470267 4537159 2500395..2501252 1 NC_008596.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 2501252 mutM 4537159 mutM Mycobacterium smegmatis str. MC2 155 formamidopyrimidine-DNA glycosylase YP_886759.1 2500395 D 246196 CDS YP_886760.1 118470430 4532221 complement(2501271..2502047) 1 NC_008596.1 hypothetical protein 2502047 4532221 MSMEG_2420 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886760.1 2501271 R 246196 CDS YP_886761.1 118469470 4535733 2502168..2502587 1 NC_008596.1 identified by match to protein family HMM PF02566; hypothetical protein 2502587 4535733 MSMEG_2421 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886761.1 2502168 D 246196 CDS YP_886762.1 118470855 4534310 2502584..2502880 1 NC_008596.1 identified by match to protein family HMM PF00708; acylphosphatase 2502880 4534310 MSMEG_2422 Mycobacterium smegmatis str. MC2 155 acylphosphatase YP_886762.1 2502584 D 246196 CDS YP_886763.1 118472416 4531338 2502907..2506494 1 NC_008596.1 identified by match to protein family HMM PF02463; match to protein family HMM PF06470; match to protein family HMM TIGR02168; chromosome segregation protein SMC 2506494 smc 4531338 smc Mycobacterium smegmatis str. MC2 155 chromosome segregation protein SMC YP_886763.1 2502907 D 246196 CDS YP_886764.1 118473366 4530842 2506567..2508042 1 NC_008596.1 identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY 2508042 ftsY 4530842 ftsY Mycobacterium smegmatis str. MC2 155 signal recognition particle-docking protein FtsY YP_886764.1 2506567 D 246196 CDS YP_886765.1 118470603 4532106 2508282..2509631 1 NC_008596.1 identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836; ammonium transporter 2509631 amt 4532106 amt Mycobacterium smegmatis str. MC2 155 ammonium transporter YP_886765.1 2508282 D 246196 CDS YP_886766.1 118470899 4537573 2509665..2510003 1 NC_008596.1 identified by match to protein family HMM PF00543; nitrogen regulatory protein P-II 2510003 4537573 MSMEG_2426 Mycobacterium smegmatis str. MC2 155 nitrogen regulatory protein P-II YP_886766.1 2509665 D 246196 CDS YP_886767.1 118471212 4533814 2510091..2512565 1 NC_008596.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; also involved in adenylylating and deadelnylyating GlnK; PII uridylyl-transferase 2512565 glnD 4533814 glnD Mycobacterium smegmatis str. MC2 155 PII uridylyl-transferase YP_886767.1 2510091 D 246196 CDS YP_886768.1 118473207 4531057 complement(2512566..2513411) 1 NC_008596.1 DNA-binding protein 2513411 4531057 MSMEG_2428 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_886768.1 2512566 R 246196 CDS YP_886769.1 118473909 4536975 2513512..2514516 1 NC_008596.1 identified by match to protein family HMM PF00248; aldo/keto reductase 2514516 4536975 MSMEG_2429 Mycobacterium smegmatis str. MC2 155 aldo/keto reductase YP_886769.1 2513512 D 246196 CDS YP_886770.1 118468367 4532916 2514582..2516150 1 NC_008596.1 identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein 2516150 ffh 4532916 ffh Mycobacterium smegmatis str. MC2 155 signal recognition particle protein YP_886770.1 2514582 D 246196 CDS YP_886771.1 118469063 4537249 2516150..2517226 1 NC_008596.1 identified by match to protein family HMM PF01979; amidohydrolase 2517226 4537249 MSMEG_2431 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_886771.1 2516150 D 246196 CDS YP_886772.1 118471560 4532208 complement(2517308..2518135) 1 NC_008596.1 identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase 2518135 4532208 MSMEG_2432 Mycobacterium smegmatis str. MC2 155 D-alanyl-D-alanine carboxypeptidase YP_886772.1 2517308 R 246196 CDS YP_886773.1 118469695 4536828 complement(2518205..2519095) 1 NC_008596.1 identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase 2519095 4536828 MSMEG_2433 Mycobacterium smegmatis str. MC2 155 D-alanyl-D-alanine carboxypeptidase YP_886773.1 2518205 R 246196 CDS YP_886774.1 118470814 4531924 2519128..2519562 1 NC_008596.1 hypothetical protein 2519562 4531924 MSMEG_2434 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886774.1 2519128 D 246196 CDS YP_886775.1 118467618 4533080 2519767..2520237 1 NC_008596.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 2520237 rpsP 4533080 rpsP Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S16 YP_886775.1 2519767 D 246196 CDS YP_886776.1 118468387 4534776 2520258..2520488 1 NC_008596.1 hypothetical protein 2520488 4534776 MSMEG_2436 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886776.1 2520258 D 246196 CDS YP_886777.1 118469073 4537259 2520523..2521044 1 NC_008596.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 2521044 rimM 4537259 rimM Mycobacterium smegmatis str. MC2 155 16S rRNA-processing protein RimM YP_886777.1 2520523 D 246196 CDS YP_886778.1 118471023 4534479 2521059..2521736 1 NC_008596.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 2521736 trmD 4534479 trmD Mycobacterium smegmatis str. MC2 155 tRNA (guanine-N(1)-)-methyltransferase YP_886778.1 2521059 D 246196 CDS YP_886779.1 118471770 4536379 complement(2521737..2522681) 1 NC_008596.1 LppW protein 2522681 4536379 MSMEG_2439 Mycobacterium smegmatis str. MC2 155 LppW protein YP_886779.1 2521737 R 246196 CDS YP_886780.1 118467755 4535655 2523015..2523356 1 NC_008596.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 2523356 rplS 4535655 rplS Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L19 YP_886780.1 2523015 D 246196 CDS YP_886781.1 118469690 4536823 2523424..2524293 1 NC_008596.1 identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I 2524293 lepB 4536823 lepB Mycobacterium smegmatis str. MC2 155 signal peptidase I YP_886781.1 2523424 D 246196 CDS YP_886782.1 118471655 4536492 2524304..2525122 1 NC_008596.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 2525122 rnhB 4536492 rnhB Mycobacterium smegmatis str. MC2 155 ribonuclease HII YP_886782.1 2524304 D 246196 CDS YP_886783.1 118471776 4536347 2525199..2525504 1 NC_008596.1 hypothetical protein 2525504 4536347 MSMEG_2443 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886783.1 2525199 D 246196 CDS YP_886784.1 118472341 4534232 complement(2525519..2526229) 1 NC_008596.1 identified by match to protein family HMM PF01738; dienelactone hydrolase 2526229 4534232 MSMEG_2444 Mycobacterium smegmatis str. MC2 155 dienelactone hydrolase YP_886784.1 2525519 R 246196 CDS YP_886785.1 118469393 4532287 complement(2526276..2527730) 1 NC_008596.1 identified by match to protein family HMM PF02696; hypothetical protein 2527730 4532287 MSMEG_2445 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886785.1 2526276 R 246196 CDS YP_886786.1 118468454 4536902 complement(2527780..2528202) 1 NC_008596.1 hypothetical protein 2528202 4536902 MSMEG_2446 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886786.1 2527780 R 246196 CDS YP_886787.1 118472335 4534226 complement(2528276..2529892) 1 NC_008596.1 identified by match to protein family HMM PF07905; regulatory protein 2529892 4534226 MSMEG_2447 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_886787.1 2528276 R 246196 CDS YP_886788.1 118473228 4536914 complement(2529889..2530023) 1 NC_008596.1 hypothetical protein 2530023 4536914 MSMEG_2448 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886788.1 2529889 R 246196 CDS YP_886789.1 118469836 4532727 2530003..2531496 1 NC_008596.1 identified by match to protein family HMM PF00171; match to protein family HMM TIGR01722; methylmalonate-semialdehyde dehydrogenase 2531496 mmsA 4532727 mmsA Mycobacterium smegmatis str. MC2 155 methylmalonate-semialdehyde dehydrogenase YP_886789.1 2530003 D 246196 CDS YP_886790.1 118473766 4537742 2531510..2532895 1 NC_008596.1 identified by match to protein family HMM PF00202; hypothetical protein 2532895 4537742 MSMEG_2450 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886790.1 2531510 D 246196 CDS YP_886791.1 118470582 4531369 2533009..2533785 1 NC_008596.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460; HAD-superfamily hydrolase 2533785 4531369 MSMEG_2451 Mycobacterium smegmatis str. MC2 155 HAD-superfamily hydrolase YP_886791.1 2533009 D 246196 CDS YP_886792.1 118468000 4531320 2533824..2534033 1 NC_008596.1 hypothetical protein 2534033 4531320 MSMEG_2452 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886792.1 2533824 D 246196 CDS YP_886793.1 118472324 4532912 2534312..2535046 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 2535046 4532912 MSMEG_2453 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_886793.1 2534312 D 246196 CDS YP_886794.1 118473780 4535137 2535043..2535504 1 NC_008596.1 identified by match to protein family HMM PF01042; translation initiation inhibitor 2535504 4535137 MSMEG_2454 Mycobacterium smegmatis str. MC2 155 translation initiation inhibitor YP_886794.1 2535043 D 246196 CDS YP_886795.1 118469584 4531458 complement(2535507..2536103) 1 NC_008596.1 identified by match to protein family HMM PF06240; carbon monoxide dehydrogenase subunit G (CoxG) superfamily protein 2536103 4531458 MSMEG_2455 Mycobacterium smegmatis str. MC2 155 carbon monoxide dehydrogenase subunit G (CoxG) superfamily protein YP_886795.1 2535507 R 246196 CDS YP_886796.1 118470041 4534585 2536199..2537197 1 NC_008596.1 identified by match to protein family HMM PF00296; 5,10-methylenetetrahydromethanopterin reductase 2537197 4534585 MSMEG_2456 Mycobacterium smegmatis str. MC2 155 5,10-methylenetetrahydromethanopterin reductase YP_886796.1 2536199 D 246196 CDS YP_886797.1 118469971 4535745 2537190..2537507 1 NC_008596.1 hypothetical protein 2537507 4535745 MSMEG_2457 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886797.1 2537190 D 246196 CDS YP_886798.1 118472114 4532156 2537542..2538522 1 NC_008596.1 hypothetical protein 2538522 4532156 MSMEG_2458 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886798.1 2537542 D 246196 CDS YP_886799.1 118472289 4532761 2538553..2539353 1 NC_008596.1 identified by match to protein family HMM PF00005; transporter ATPase 2539353 4532761 MSMEG_2459 Mycobacterium smegmatis str. MC2 155 transporter ATPase YP_886799.1 2538553 D 246196 CDS YP_886800.1 118470106 4534941 2539350..2540198 1 NC_008596.1 identified by match to protein family HMM PF00528; transporter permease 2540198 4534941 MSMEG_2460 Mycobacterium smegmatis str. MC2 155 transporter permease YP_886800.1 2539350 D 246196 CDS YP_886801.1 118467527 4535538 2540195..2540983 1 NC_008596.1 identified by match to protein family HMM PF00528; transporter permease 2540983 4535538 MSMEG_2461 Mycobacterium smegmatis str. MC2 155 transporter permease YP_886801.1 2540195 D 246196 CDS YP_886802.1 118472476 4533843 2540980..2543313 1 NC_008596.1 identified by match to protein family HMM PF01315; match to protein family HMM PF02738; carbon-monoxide dehydrogenase 2543313 4533843 MSMEG_2462 Mycobacterium smegmatis str. MC2 155 carbon-monoxide dehydrogenase YP_886802.1 2540980 D 246196 CDS YP_886803.1 118473353 4532019 2543310..2544191 1 NC_008596.1 identified by match to protein family HMM PF00941; nicotine dehydrogenase chain A 2544191 4532019 MSMEG_2463 Mycobacterium smegmatis str. MC2 155 nicotine dehydrogenase chain A YP_886803.1 2543310 D 246196 CDS YP_886804.1 118470945 4533680 2544178..2544684 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF01799; 2Fe-2S-binding domain-containing protein 2544684 4533680 MSMEG_2464 Mycobacterium smegmatis str. MC2 155 2Fe-2S-binding domain-containing protein YP_886804.1 2544178 D 246196 CDS YP_886805.1 118473965 4533036 2544747..2545967 1 NC_008596.1 identified by match to protein family HMM PF01979; match to protein family HMM PF07969; adenine deaminase 2545967 4533036 MSMEG_2465 Mycobacterium smegmatis str. MC2 155 adenine deaminase YP_886805.1 2544747 D 246196 CDS YP_886806.1 118467571 4532861 2546004..2547203 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; glutaryl-CoA dehydrogenase 2547203 4532861 MSMEG_2466 Mycobacterium smegmatis str. MC2 155 glutaryl-CoA dehydrogenase YP_886806.1 2546004 D 246196 CDS YP_886807.1 118468547 4536099 2547242..2549401 1 NC_008596.1 identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780; transketolase, central region 2549401 4536099 MSMEG_2467 Mycobacterium smegmatis str. MC2 155 transketolase, central region YP_886807.1 2547242 D 246196 CDS YP_886808.1 118467583 4532873 2549414..2550649 1 NC_008596.1 identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F 2550649 4532873 MSMEG_2468 Mycobacterium smegmatis str. MC2 155 L-carnitine dehydratase/bile acid-inducible protein F YP_886808.1 2549414 D 246196 CDS YP_886809.1 118467654 4535002 2550646..2551455 1 NC_008596.1 identified by match to protein family HMM PF02551; acyl-CoA thioesterase 2551455 4535002 MSMEG_2470 Mycobacterium smegmatis str. MC2 155 acyl-CoA thioesterase YP_886809.1 2550646 D 246196 CDS YP_886810.1 118472577 4534356 complement(2551339..2553918) 1 NC_008596.1 identified by match to protein family HMM PF00501; match to protein family HMM PF00550; AMP-dependent synthetase/ligase 2553918 4534356 MSMEG_2469 Mycobacterium smegmatis str. MC2 155 AMP-dependent synthetase/ligase YP_886810.1 2551339 R 246196 CDS YP_886811.1 118469616 4531588 complement(2554008..2556437) 1 NC_008596.1 identified by match to protein family HMM PF02779; match to protein family HMM PF02780; pyruvate dehydrogenase subunit alpha 2556437 4531588 MSMEG_2471 Mycobacterium smegmatis str. MC2 155 pyruvate dehydrogenase subunit alpha YP_886811.1 2554008 R 246196 CDS YP_886812.1 118468087 4536015 2556536..2557012 1 NC_008596.1 identified by match to protein family HMM PF01037; AsnC family transcriptional regulator 2557012 4536015 MSMEG_2472 Mycobacterium smegmatis str. MC2 155 AsnC family transcriptional regulator YP_886812.1 2556536 D 246196 CDS YP_886813.1 118470895 4537200 2558654..2559433 1 NC_008596.1 identified by match to protein family HMM PF01083; match to protein family HMM PF02230; cutinase Cut3 2559433 4537200 MSMEG_2474 Mycobacterium smegmatis str. MC2 155 cutinase Cut3 YP_886813.1 2558654 D 246196 CDS YP_886814.1 118473694 4531091 complement(2559495..2560349) 1 NC_008596.1 identified by match to protein family HMM PF00248; oxidoreductase YdbC 2560349 4531091 MSMEG_2475 Mycobacterium smegmatis str. MC2 155 oxidoreductase YdbC YP_886814.1 2559495 R 246196 CDS YP_886815.1 118468844 4535421 complement(2560435..2560866) 1 NC_008596.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 2560866 4535421 MSMEG_2476 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_886815.1 2560435 R 246196 CDS YP_886816.1 118470726 4533941 complement(2560939..2562006) 1 NC_008596.1 identified by match to protein family HMM PF00106; cyclopentanol dehydrogenase 2562006 4533941 MSMEG_2477 Mycobacterium smegmatis str. MC2 155 cyclopentanol dehydrogenase YP_886816.1 2560939 R 246196 CDS YP_886817.1 118472238 4532459 complement(2562032..2562889) 1 NC_008596.1 identified by match to protein family HMM PF01557; fumarylacetoacetate hydrolase 2562889 4532459 MSMEG_2478 Mycobacterium smegmatis str. MC2 155 fumarylacetoacetate hydrolase YP_886817.1 2562032 R 246196 CDS YP_886818.1 118471417 4532800 2562764..2562925 1 NC_008596.1 hypothetical protein 2562925 4532800 MSMEG_2479 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886818.1 2562764 D 246196 CDS YP_886819.1 118469076 4537631 2562958..2563698 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 2563698 4537631 MSMEG_2480 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_886819.1 2562958 D 246196 CDS YP_886820.1 118470787 4536070 2563709..2564953 1 NC_008596.1 hypothetical protein 2564953 4536070 MSMEG_2481 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886820.1 2563709 D 246196 CDS YP_886821.1 118472938 4531754 2565001..2565369 1 NC_008596.1 hypothetical protein 2565369 4531754 MSMEG_2482 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886821.1 2565001 D 246196 CDS YP_886822.1 118472632 4537651 2565362..2566084 1 NC_008596.1 identified by match to protein family HMM PF01614; IclR family transcriptional regulator 2566084 4537651 MSMEG_2483 Mycobacterium smegmatis str. MC2 155 IclR family transcriptional regulator YP_886822.1 2565362 D 246196 CDS YP_886823.1 118470381 4532328 complement(2566112..2566801) 1 NC_008596.1 hypothetical protein 2566801 4532328 MSMEG_2484 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886823.1 2566112 R 246196 CDS YP_886824.1 118473309 4535181 complement(2566837..2568444) 1 NC_008596.1 catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate; 3-(3-hydroxyphenyl)propionate hydroxylase 2568444 mhpA 4535181 mhpA Mycobacterium smegmatis str. MC2 155 3-(3-hydroxyphenyl)propionate hydroxylase YP_886824.1 2566837 R 246196 CDS YP_886825.1 118468918 4537080 2568753..2570159 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily protein 2570159 4537080 MSMEG_2486 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_886825.1 2568753 D 246196 CDS YP_886826.1 118468965 4533529 complement(2570219..2571472) 1 NC_008596.1 identified by match to protein family HMM PF00202; 4-aminobutyrate aminotransferase 2571472 4533529 MSMEG_2487 Mycobacterium smegmatis str. MC2 155 4-aminobutyrate aminotransferase YP_886826.1 2570219 R 246196 CDS YP_886827.1 118470465 4536774 2571561..2573021 1 NC_008596.1 identified by match to protein family HMM PF00171; [NADP+] succinate-semialdehyde dehydrogenase 2573021 4536774 MSMEG_2488 Mycobacterium smegmatis str. MC2 155 [NADP+] succinate-semialdehyde dehydrogenase YP_886827.1 2571561 D 246196 CDS YP_886828.1 118469730 4537605 complement(2573037..2573759) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 2573759 4537605 MSMEG_2489 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_886828.1 2573037 R 246196 CDS YP_886829.1 118471511 4537222 complement(2573756..2574385) 1 NC_008596.1 identified by match to protein family HMM PF01177; decarboxylase 2574385 4537222 MSMEG_2490 Mycobacterium smegmatis str. MC2 155 decarboxylase YP_886829.1 2573756 R 246196 CDS YP_886830.1 118467953 4532064 2574544..2577402 1 NC_008596.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02754; match to protein family HMM PF02913; D-lactate dehydrogenase 2577402 4532064 MSMEG_2492 Mycobacterium smegmatis str. MC2 155 D-lactate dehydrogenase YP_886830.1 2574544 D 246196 CDS YP_886831.1 118473436 4534127 complement(2577399..2578571) 1 NC_008596.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910; acetylornithine deacetylase 2578571 4534127 MSMEG_2491 Mycobacterium smegmatis str. MC2 155 acetylornithine deacetylase YP_886831.1 2577399 R 246196 CDS YP_886832.1 118467803 4535980 complement(2578576..2579775) 1 NC_008596.1 identified by match to protein family HMM PF00155; aminotransferase, class I and II family protein 2579775 4535980 MSMEG_2493 Mycobacterium smegmatis str. MC2 155 aminotransferase, class I and II family protein YP_886832.1 2578576 R 246196 CDS YP_886833.1 118468524 4535349 complement(2579779..2580945) 1 NC_008596.1 identified by match to protein family HMM PF00557; Xaa-Pro aminopeptidase 2580945 4535349 MSMEG_2494 Mycobacterium smegmatis str. MC2 155 Xaa-Pro aminopeptidase YP_886833.1 2579779 R 246196 CDS YP_886834.1 118472284 4534810 complement(2580942..2581646) 1 NC_008596.1 identified by match to protein family HMM PF01177; decarboxylase 2581646 4534810 MSMEG_2495 Mycobacterium smegmatis str. MC2 155 decarboxylase YP_886834.1 2580942 R 246196 CDS YP_886835.1 118471518 4537229 2581723..2582772 1 NC_008596.1 identified by match to protein family HMM PF00389; match to protein family HMM PF02826; NAD-binding protein 2582772 4537229 MSMEG_2496 Mycobacterium smegmatis str. MC2 155 NAD-binding protein YP_886835.1 2581723 D 246196 CDS YP_886836.1 118469908 4535562 2582769..2584172 1 NC_008596.1 identified by match to protein family HMM PF01425; amidase 2584172 4535562 MSMEG_2497 Mycobacterium smegmatis str. MC2 155 amidase YP_886836.1 2582769 D 246196 CDS YP_886837.1 118473700 4533248 2584169..2584669 1 NC_008596.1 hypothetical protein 2584669 4533248 MSMEG_2498 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886837.1 2584169 D 246196 CDS YP_886838.1 118471442 4535117 2584688..2585911 1 NC_008596.1 hypothetical protein 2585911 4535117 MSMEG_2500 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886838.1 2584688 D 246196 CDS YP_886839.1 118471564 4532212 complement(2585908..2586690) 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter 2586690 4532212 MSMEG_2499 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_886839.1 2585908 R 246196 CDS YP_886840.1 118467860 4532882 complement(2586687..2587553) 1 NC_008596.1 identified by match to protein family HMM PF00528; nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein 2587553 4532882 MSMEG_2501 Mycobacterium smegmatis str. MC2 155 nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein YP_886840.1 2586687 R 246196 CDS YP_886841.1 118473672 4531243 complement(2587550..2588344) 1 NC_008596.1 identified by match to protein family HMM PF00005; transporter ATPase 2588344 4531243 MSMEG_2502 Mycobacterium smegmatis str. MC2 155 transporter ATPase YP_886841.1 2587550 R 246196 CDS YP_886842.1 118471707 4536432 complement(2588395..2589414) 1 NC_008596.1 hypothetical protein 2589414 4536432 MSMEG_2503 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886842.1 2588395 R 246196 CDS YP_886843.1 118470044 4534588 complement(2589424..2589951) 1 NC_008596.1 identified by match to protein family HMM TIGR02087; 3-isopropylmalate dehydratase small subunit 2589951 4534588 MSMEG_2504 Mycobacterium smegmatis str. MC2 155 3-isopropylmalate dehydratase small subunit YP_886843.1 2589424 R 246196 CDS YP_886844.1 118468545 4536097 complement(2589951..2591192) 1 NC_008596.1 identified by match to protein family HMM PF00330; 3-isopropylmalate dehydratase large subunit 2591192 4536097 MSMEG_2505 Mycobacterium smegmatis str. MC2 155 3-isopropylmalate dehydratase large subunit YP_886844.1 2589951 R 246196 CDS YP_886845.1 118473776 4535133 complement(2591193..2592062) 1 NC_008596.1 carboxyvinyl-carboxyphosphonate phosphorylmutase 2592062 4535133 MSMEG_2506 Mycobacterium smegmatis str. MC2 155 carboxyvinyl-carboxyphosphonate phosphorylmutase YP_886845.1 2591193 R 246196 CDS YP_886846.1 118472354 4531605 complement(2592063..2592839) 1 NC_008596.1 identified by match to protein family HMM PF01614; IclR-family protein transcriptional regulator 2592839 4531605 MSMEG_2507 Mycobacterium smegmatis str. MC2 155 IclR-family protein transcriptional regulator YP_886846.1 2592063 R 246196 CDS YP_886847.1 118469536 4537110 2593267..2593641 1 NC_008596.1 identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; hypothetical protein 2593641 4537110 MSMEG_2508 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886847.1 2593267 D 246196 CDS YP_886848.1 118468932 4537466 2593697..2595151 1 NC_008596.1 identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368; Mg-chelatase subunits D/I family protein, ComM subfamily protein 2595151 4537466 MSMEG_2509 Mycobacterium smegmatis str. MC2 155 Mg-chelatase subunits D/I family protein, ComM subfamily protein YP_886848.1 2593697 D 246196 CDS YP_886849.1 118471191 4531485 2596370..2597242 1 NC_008596.1 identified by match to protein family HMM PF04954; match to protein family HMM PF08021; siderophore utilization protein 2597242 4531485 MSMEG_2511 Mycobacterium smegmatis str. MC2 155 siderophore utilization protein YP_886849.1 2596370 D 246196 CDS YP_886850.1 118469434 4534330 2597267..2598430 1 NC_008596.1 identified by match to protein family HMM PF01070; lactate 2-monooxygenase 2598430 4534330 MSMEG_2512 Mycobacterium smegmatis str. MC2 155 lactate 2-monooxygenase YP_886850.1 2597267 D 246196 CDS YP_886851.1 118469336 4535926 2598528..2599364 1 NC_008596.1 hypothetical protein 2599364 4535926 MSMEG_2513 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886851.1 2598528 D 246196 CDS YP_886852.1 118473200 4533317 2601428..2602330 1 NC_008596.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 2602330 xerC 4533317 xerC Mycobacterium smegmatis str. MC2 155 site-specific tyrosine recombinase XerC YP_886852.1 2601428 D 246196 CDS YP_886853.1 118473858 4533558 2602327..2603208 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 2603208 4533558 MSMEG_2517 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_886853.1 2602327 D 246196 CDS YP_886854.1 118471481 4531882 complement(2603192..2604121) 1 NC_008596.1 identified by match to protein family HMM PF00296; oxidoreductase 2604121 4531882 MSMEG_2516 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_886854.1 2603192 R 246196 CDS YP_886855.1 118472121 4532163 complement(2604148..2604666) 1 NC_008596.1 identified by match to protein family HMM PF01551; peptidase M23B 2604666 4532163 MSMEG_2518 Mycobacterium smegmatis str. MC2 155 peptidase M23B YP_886855.1 2604148 R 246196 CDS YP_886856.1 118469915 4535569 2604918..2605793 1 NC_008596.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 2605793 rpsB 4535569 rpsB Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S2 YP_886856.1 2604918 D 246196 CDS YP_886857.1 118468193 4534407 2605809..2606636 1 NC_008596.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 2606636 tsf 4534407 tsf Mycobacterium smegmatis str. MC2 155 elongation factor Ts YP_886857.1 2605809 D 246196 CDS YP_886858.1 118472861 4531345 2606795..2608255 1 NC_008596.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 2608255 4531345 MSMEG_2521 Mycobacterium smegmatis str. MC2 155 amidase YP_886858.1 2606795 D 246196 CDS YP_886859.1 118470453 4534516 2608371..2609555 1 NC_008596.1 identified by match to protein family HMM PF02687; efflux ABC transporter permease 2609555 4534516 MSMEG_2522 Mycobacterium smegmatis str. MC2 155 efflux ABC transporter permease YP_886859.1 2608371 D 246196 CDS YP_886860.1 118467963 4532075 2609552..2610118 1 NC_008596.1 identified by match to protein family HMM PF02687; efflux ABC transporter permease 2610118 4532075 MSMEG_2523 Mycobacterium smegmatis str. MC2 155 efflux ABC transporter permease YP_886860.1 2609552 D 246196 CDS YP_886861.1 118471737 4536384 2610123..2610845 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2610845 4536384 MSMEG_2524 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_886861.1 2610123 D 246196 CDS YP_886862.1 118468467 4537288 2610917..2612377 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 2612377 4537288 MSMEG_2525 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_886862.1 2610917 D 246196 CDS YP_886863.1 118471372 4535279 2612646..2614619 1 NC_008596.1 catalyzes the formation of phenylacetaldehyde from 2-phenylethylamine; tyramine oxidase 2614619 tynA 4535279 tynA Mycobacterium smegmatis str. MC2 155 tyramine oxidase YP_886863.1 2612646 D 246196 CDS YP_886864.1 118468500 4535481 2614912..2615016 1 NC_008596.1 hypothetical protein 2615016 4535481 MSMEG_2527 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886864.1 2614912 D 246196 CDS YP_886865.1 118469222 4533276 complement(2615039..2616163) 1 NC_008596.1 identified by match to protein family HMM PF02595; match to protein family HMM TIGR00045; glycerate kinase 2616163 4533276 MSMEG_2528 Mycobacterium smegmatis str. MC2 155 glycerate kinase YP_886865.1 2615039 R 246196 CDS YP_886866.1 118469235 4535371 complement(2616171..2617124) 1 NC_008596.1 identified by match to protein family HMM PF00389; match to protein family HMM PF02826; glyoxylate reductase 2617124 4535371 MSMEG_2529 Mycobacterium smegmatis str. MC2 155 glyoxylate reductase YP_886866.1 2616171 R 246196 CDS YP_886867.1 118472925 4531214 complement(2617182..2617610) 1 NC_008596.1 identified by match to protein family HMM PF02627; hypothetical protein 2617610 pcaC 4531214 pcaC Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886867.1 2617182 R 246196 CDS YP_886868.1 118472973 4532312 complement(2617653..2618345) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 2618345 4532312 MSMEG_2531 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_886868.1 2617653 R 246196 CDS YP_886869.1 118473633 4531029 2618774..2619349 1 NC_008596.1 identified by match to protein family HMM PF01220; dehydroquinase dehydratase, type II 2619349 aroQ 4531029 aroQ Mycobacterium smegmatis str. MC2 155 dehydroquinase dehydratase, type II YP_886869.1 2618774 D 246196 CDS YP_886870.1 118471475 4531876 2619436..2619741 1 NC_008596.1 hypothetical protein 2619741 4531876 MSMEG_2533 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886870.1 2619436 D 246196 CDS YP_886871.1 118472196 4530854 2619738..2620601 1 NC_008596.1 identified by match to protein family HMM PF00561; carboxylesterase 2620601 4530854 MSMEG_2534 Mycobacterium smegmatis str. MC2 155 carboxylesterase YP_886871.1 2619738 D 246196 CDS YP_886872.1 118468359 4533958 2620637..2621404 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; dehydrogenase/reductase SDR family protein member 10 2621404 4533958 MSMEG_2535 Mycobacterium smegmatis str. MC2 155 dehydrogenase/reductase SDR family protein member 10 YP_886872.1 2620637 D 246196 CDS YP_886873.1 118469441 4534817 2621453..2622208 1 NC_008596.1 identified by match to protein family HMM PF00106; 3-oxoacyl-ACP reductase 2622208 4534817 MSMEG_2536 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_886873.1 2621453 D 246196 CDS YP_886874.1 118473559 4532430 2622262..2623653 1 NC_008596.1 identified by match to protein family HMM PF07690; transporter protein 2623653 4532430 MSMEG_2537 Mycobacterium smegmatis str. MC2 155 transporter protein YP_886874.1 2622262 D 246196 CDS YP_886875.1 118467907 4531263 complement(2623666..2624094) 1 NC_008596.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 2624094 4531263 MSMEG_2538 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_886875.1 2623666 R 246196 CDS YP_886876.1 118470628 4532986 2624131..2624811 1 NC_008596.1 identified by match to protein family HMM PF05724; thiopurine S-methyltransferase (tpmt) superfamily protein 2624811 4532986 MSMEG_2539 Mycobacterium smegmatis str. MC2 155 thiopurine S-methyltransferase (tpmt) superfamily protein YP_886876.1 2624131 D 246196 CDS YP_886877.1 118468795 4535313 2624947..2625693 1 NC_008596.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 2625693 pyrH 4535313 pyrH Mycobacterium smegmatis str. MC2 155 uridylate kinase YP_886877.1 2624947 D 246196 CDS YP_886878.1 118472629 4537279 2625741..2626298 1 NC_008596.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 2626298 frr 4537279 frr Mycobacterium smegmatis str. MC2 155 ribosome recycling factor YP_886878.1 2625741 D 246196 CDS YP_886879.1 118470724 4533939 2626299..2627177 1 NC_008596.1 identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase 2627177 cdsA 4533939 cdsA Mycobacterium smegmatis str. MC2 155 phosphatidate cytidylyltransferase YP_886879.1 2626299 D 246196 CDS YP_886880.1 118473537 4533637 complement(2627136..2628050) 1 NC_008596.1 identified by match to protein family HMM PF00892; hypothetical protein 2628050 4533637 MSMEG_2542 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886880.1 2627136 R 246196 CDS YP_886881.1 118471146 4531833 2628197..2629090 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 2629090 4531833 MSMEG_2544 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_886881.1 2628197 D 246196 CDS YP_886882.1 118472101 4537482 2629087..2630205 1 NC_008596.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 2630205 4537482 MSMEG_2545 Mycobacterium smegmatis str. MC2 155 ribosomal RNA large subunit methyltransferase N YP_886882.1 2629087 D 246196 CDS YP_886883.1 118473549 4532419 complement(2630288..2630989) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 2630989 4532419 MSMEG_2546 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_886883.1 2630288 R 246196 CDS YP_886884.1 118467548 4535501 complement(2631062..2632063) 1 NC_008596.1 identified by match to protein family HMM PF04198; transcriptional regulator 2632063 4535501 MSMEG_2547 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_886884.1 2631062 R 246196 CDS YP_886885.1 118472353 4531604 2632377..2633153 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; 3-oxoacyl-ACP reductase 2633153 4531604 MSMEG_2548 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_886885.1 2632377 D 246196 CDS YP_886886.1 118470337 4534920 2633198..2634526 1 NC_008596.1 identified by match to protein family HMM PF07690; major facilitator superfamily protein 2634526 4534920 MSMEG_2549 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_886886.1 2633198 D 246196 CDS YP_886887.1 118473971 4533042 2634530..2635594 1 NC_008596.1 identified by match to protein family HMM PF00389; match to protein family HMM PF02826; glyoxylate reductase 2635594 4533042 MSMEG_2550 Mycobacterium smegmatis str. MC2 155 glyoxylate reductase YP_886887.1 2634530 D 246196 CDS YP_886888.1 118471859 4536274 complement(2635629..2635754) 1 NC_008596.1 hypothetical protein 2635754 4536274 MSMEG_2551 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886888.1 2635629 R 246196 CDS YP_886889.1 118471105 4535870 complement(2635751..2637235) 1 NC_008596.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 2637235 4535870 MSMEG_2552 Mycobacterium smegmatis str. MC2 155 aldehyde dehydrogenase YP_886889.1 2635751 R 246196 CDS YP_886890.1 118470150 4531709 complement(2637301..2637849) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2637849 4531709 MSMEG_2553 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886890.1 2637301 R 246196 CDS YP_886891.1 118468206 4536648 complement(2637892..2639031) 1 NC_008596.1 identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein 2639031 4536648 MSMEG_2554 Mycobacterium smegmatis str. MC2 155 phosphotransferase enzyme family protein YP_886891.1 2637892 R 246196 CDS YP_886892.1 118468186 4534400 complement(2639368..2639781) 1 NC_008596.1 hypothetical protein 2639781 4534400 MSMEG_2555 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886892.1 2639368 R 246196 CDS YP_886893.1 118473333 4530992 complement(2639792..2642041) 1 NC_008596.1 identified by match to protein family HMM PF00933; match to protein family HMM PF01915; beta-glucosidase 2642041 4530992 MSMEG_2556 Mycobacterium smegmatis str. MC2 155 beta-glucosidase YP_886893.1 2639792 R 246196 CDS YP_886894.1 118472417 4531339 complement(2642079..2642627) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2642627 4531339 MSMEG_2557 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_886894.1 2642079 R 246196 CDS YP_886895.1 118469762 4532826 2642713..2643969 1 NC_008596.1 identified by match to protein family HMM PF00067; NikQ protein 2643969 4532826 MSMEG_2558 Mycobacterium smegmatis str. MC2 155 NikQ protein YP_886895.1 2642713 D 246196 CDS YP_886896.1 118472933 4531222 2643983..2644174 1 NC_008596.1 hypothetical protein 2644174 4531222 MSMEG_2559 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886896.1 2643983 D 246196 CDS YP_886897.1 118472756 4531945 complement(2644175..2644993) 1 NC_008596.1 hypothetical protein 2644993 4531945 MSMEG_2560 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886897.1 2644175 R 246196 CDS YP_886898.1 118473938 4537376 complement(2645003..2645887) 1 NC_008596.1 identified by match to protein family HMM PF03758; gluconolactonase 2645887 4537376 MSMEG_2561 Mycobacterium smegmatis str. MC2 155 gluconolactonase YP_886898.1 2645003 R 246196 CDS YP_886899.1 118467351 4534710 2645963..2646667 1 NC_008596.1 hypothetical protein 2646667 4534710 MSMEG_2562 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886899.1 2645963 D 246196 CDS YP_886900.1 118469276 4532246 2646676..2647914 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 2647914 4532246 MSMEG_2563 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_886900.1 2646676 D 246196 CDS YP_886901.1 118472109 4537490 2647916..2648884 1 NC_008596.1 identified by match to protein family HMM PF00107; oxidoreductase, zinc-binding dehydrogenase 2648884 4537490 MSMEG_2564 Mycobacterium smegmatis str. MC2 155 oxidoreductase, zinc-binding dehydrogenase YP_886901.1 2647916 D 246196 CDS YP_886902.1 118472535 4534734 2648881..2649663 1 NC_008596.1 identified by match to protein family HMM PF03328; 4-hydroxy-2-oxovalerate aldolase 2649663 4534734 MSMEG_2565 Mycobacterium smegmatis str. MC2 155 4-hydroxy-2-oxovalerate aldolase YP_886902.1 2648881 D 246196 CDS YP_886903.1 118470917 4533965 2649687..2650415 1 NC_008596.1 identified by match to protein family HMM PF00106; 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase 2650415 4533965 MSMEG_2566 Mycobacterium smegmatis str. MC2 155 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase YP_886903.1 2649687 D 246196 CDS YP_886904.1 118470914 4537588 2650397..2651911 1 NC_008596.1 monooxygenase 2651911 4537588 MSMEG_2567 Mycobacterium smegmatis str. MC2 155 monooxygenase YP_886904.1 2650397 D 246196 CDS YP_886905.1 118472357 4531608 2651913..2652845 1 NC_008596.1 identified by match to protein family HMM PF07859; LipW protein 2652845 4531608 MSMEG_2568 Mycobacterium smegmatis str. MC2 155 LipW protein YP_886905.1 2651913 D 246196 CDS YP_886906.1 118469154 4534740 complement(2652955..2653929) 1 NC_008596.1 identified by match to protein family HMM PF03171; oxidoreductase, 2OG-Fe(II) oxygenase 2653929 4534740 MSMEG_2569 Mycobacterium smegmatis str. MC2 155 oxidoreductase, 2OG-Fe(II) oxygenase YP_886906.1 2652955 R 246196 CDS YP_886907.1 118467700 4537338 complement(2653937..2655358) 1 NC_008596.1 identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM TIGR00801; xanthine/uracil permease 2655358 4537338 MSMEG_2570 Mycobacterium smegmatis str. MC2 155 xanthine/uracil permease YP_886907.1 2653937 R 246196 CDS YP_886908.1 118468452 4536900 2655727..2656023 1 NC_008596.1 cupin 2656023 4536900 MSMEG_2571 Mycobacterium smegmatis str. MC2 155 cupin YP_886908.1 2655727 D 246196 CDS YP_886909.1 118473666 4531237 complement(2656031..2656504) 1 NC_008596.1 hypothetical protein 2656504 4531237 MSMEG_2572 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886909.1 2656031 R 246196 CDS YP_886910.1 118467688 4537326 complement(2656525..2657232) 1 NC_008596.1 identified by match to protein family HMM PF04248; hypothetical protein 2657232 4537326 MSMEG_2573 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886910.1 2656525 R 246196 CDS YP_886911.1 118469843 4532734 2657470..2658036 1 NC_008596.1 hypothetical protein 2658036 4532734 MSMEG_2574 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886911.1 2657470 D 246196 CDS YP_886912.1 118467927 4532660 complement(2658074..2658328) 1 NC_008596.1 hypothetical protein 2658328 4532660 MSMEG_2575 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886912.1 2658074 R 246196 CDS YP_886913.1 118472574 4534353 complement(2658411..2659769) 1 NC_008596.1 identified by match to protein family HMM PF00875; match to protein family HMM PF03441; deoxyribodipyrimidine photo-lyase 2659769 4534353 MSMEG_2576 Mycobacterium smegmatis str. MC2 155 deoxyribodipyrimidine photo-lyase YP_886913.1 2658411 R 246196 CDS YP_886914.1 118471662 4536460 2659722..2659961 1 NC_008596.1 hypothetical protein 2659961 4536460 MSMEG_2577 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886914.1 2659722 D 246196 CDS YP_886915.1 118471802 4536334 2660026..2661222 1 NC_008596.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2661222 dxr 4536334 dxr Mycobacterium smegmatis str. MC2 155 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_886915.1 2660026 D 246196 CDS YP_886916.1 118472533 4534732 2661219..2662439 1 NC_008596.1 identified by match to protein family HMM PF02163; zinc metalloprotease 2662439 4534732 MSMEG_2579 Mycobacterium smegmatis str. MC2 155 zinc metalloprotease YP_886916.1 2661219 D 246196 CDS YP_886917.1 118468236 4537421 2662456..2663622 1 NC_008596.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2663622 ispG 4537421 ispG Mycobacterium smegmatis str. MC2 155 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_886917.1 2662456 D 246196 CDS YP_886918.1 118473916 4536982 2663721..2664533 1 NC_008596.1 identified by match to protein family HMM PF00583; acetyltransferase 2664533 4536982 MSMEG_2581 Mycobacterium smegmatis str. MC2 155 acetyltransferase YP_886918.1 2663721 D 246196 CDS YP_886919.1 118471521 4537232 complement(2664545..2665084) 1 NC_008596.1 hypothetical protein 2665084 4537232 MSMEG_2582 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886919.1 2664545 R 246196 CDS YP_886920.1 118470161 4534339 2665175..2665783 1 NC_008596.1 identified by match to protein family HMM PF00440; match to protein family HMM PF02909; transcriptional regulator 2665783 4534339 MSMEG_2583 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_886920.1 2665175 D 246196 CDS YP_886921.1 118473870 4531118 2665920..2667740 1 NC_008596.1 identified by match to protein family HMM PF00905; match to protein family HMM PF05223; penicillin-binding protein 2667740 4531118 MSMEG_2584 Mycobacterium smegmatis str. MC2 155 penicillin-binding protein YP_886921.1 2665920 D 246196 CDS YP_886922.1 118472809 4536663 2667790..2668377 1 NC_008596.1 identified by match to protein family HMM PF08044; hypothetical protein 2668377 4536663 MSMEG_2585 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886922.1 2667790 D 246196 CDS YP_886923.1 118470557 4531500 complement(2668397..2668783) 1 NC_008596.1 identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; hypothetical protein 2668783 4531500 MSMEG_2586 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886923.1 2668397 R 246196 CDS YP_886924.1 118469093 4537649 2668898..2669755 1 NC_008596.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential; methionine aminopeptidase 2669755 map 4537649 map Mycobacterium smegmatis str. MC2 155 methionine aminopeptidase YP_886924.1 2668898 D 246196 CDS YP_886925.1 118468618 4535016 2669752..2671242 1 NC_008596.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 2671242 cobQ 4535016 cobQ Mycobacterium smegmatis str. MC2 155 cobyric acid synthase YP_886925.1 2669752 D 246196 CDS YP_886926.1 118467859 4532881 complement(2671246..2671656) 1 NC_008596.1 hypothetical protein 2671656 4532881 MSMEG_2589 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886926.1 2671246 R 246196 CDS YP_886927.1 118467937 4533416 2671766..2672536 1 NC_008596.1 identified by match to protein family HMM PF00165; match to protein family HMM PF02311; AraC family transcriptional regulator 2672536 4533416 MSMEG_2590 Mycobacterium smegmatis str. MC2 155 AraC family transcriptional regulator YP_886927.1 2671766 D 246196 CDS YP_886928.1 118470397 4533458 2672585..2673241 1 NC_008596.1 hypothetical protein 2673241 4533458 MSMEG_2591 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886928.1 2672585 D 246196 CDS YP_886929.1 118473386 4536631 2673315..2673878 1 NC_008596.1 hypothetical protein 2673878 4536631 MSMEG_2592 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886929.1 2673315 D 246196 CDS YP_886930.1 118471790 4536361 complement(2673880..2675709) 1 NC_008596.1 identified by match to protein family HMM PF00583; match to protein family HMM TIGR03103; GNAT family acetyltransferase 2675709 4536361 MSMEG_2593 Mycobacterium smegmatis str. MC2 155 GNAT family acetyltransferase YP_886930.1 2673880 R 246196 CDS YP_886931.1 118472108 4537489 complement(2675706..2677511) 1 NC_008596.1 identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536; match to protein family HMM TIGR03104; asparagine synthase 2677511 asnB 4537489 asnB Mycobacterium smegmatis str. MC2 155 asparagine synthase YP_886931.1 2675706 R 246196 CDS YP_886932.1 118468369 4532918 2677864..2679237 1 NC_008596.1 identified by match to protein family HMM PF00120; gamma-glutamylisopropylamide synthetase 2679237 4532918 MSMEG_2595 Mycobacterium smegmatis str. MC2 155 gamma-glutamylisopropylamide synthetase YP_886932.1 2677864 D 246196 CDS YP_886933.1 118468376 4532925 2679224..2679973 1 NC_008596.1 identified by match to protein family HMM PF00117; match to protein family HMM PF07722; peptidase C26 2679973 4532925 MSMEG_2596 Mycobacterium smegmatis str. MC2 155 peptidase C26 YP_886933.1 2679224 D 246196 CDS YP_886934.1 118467824 4534575 2679970..2681325 1 NC_008596.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 2681325 4534575 MSMEG_2597 Mycobacterium smegmatis str. MC2 155 aldehyde dehydrogenase YP_886934.1 2679970 D 246196 CDS YP_886935.1 118472622 4537272 2681364..2682137 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 2682137 4537272 MSMEG_2598 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_886935.1 2681364 D 246196 CDS YP_886936.1 118469703 4537208 2682163..2682897 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF02082; match to protein family HMM PF07729; GntR family transcriptional regulator 2682897 4537208 MSMEG_2599 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_886936.1 2682163 D 246196 CDS YP_886937.1 118468954 4532617 complement(2682903..2683643) 1 NC_008596.1 identified by match to protein family HMM PF01614; regulatory protein 2683643 4532617 MSMEG_2600 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_886937.1 2682903 R 246196 CDS YP_886938.1 118471854 4536269 2683715..2684461 1 NC_008596.1 identified by match to protein family HMM PF00775; match to protein family HMM TIGR02422; protocatechuate 3,4-dioxygenase subunit beta 2684461 pcaH 4536269 pcaH Mycobacterium smegmatis str. MC2 155 protocatechuate 3,4-dioxygenase subunit beta YP_886938.1 2683715 D 246196 CDS YP_886939.1 118470366 4534641 2684461..2685018 1 NC_008596.1 identified by match to protein family HMM PF00775; match to protein family HMM TIGR02423; protocatechuate 3,4-dioxygenase subunit alpha 2685018 pcaG 4534641 pcaG Mycobacterium smegmatis str. MC2 155 protocatechuate 3,4-dioxygenase subunit alpha YP_886939.1 2684461 D 246196 CDS YP_886940.1 118469448 4534825 2685015..2686217 1 NC_008596.1 identified by match to protein family HMM PF00206; match to protein family HMM TIGR02426; 3-carboxy-cis,cis-muconate cycloisomerase 2686217 pcaB 4534825 pcaB Mycobacterium smegmatis str. MC2 155 3-carboxy-cis,cis-muconate cycloisomerase YP_886940.1 2685015 D 246196 CDS YP_886941.1 118467987 4531307 2686214..2686618 1 NC_008596.1 identified by match to protein family HMM PF02627; match to protein family HMM TIGR02425; 4-carboxymuconolactone decarboxylase 2686618 pcaC 4531307 pcaC Mycobacterium smegmatis str. MC2 155 4-carboxymuconolactone decarboxylase YP_886941.1 2686214 D 246196 CDS YP_886942.1 118473713 4533261 complement(2686690..2687430) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 2687430 4533261 MSMEG_2605 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_886942.1 2686690 R 246196 CDS YP_886943.1 118468357 4533956 2687544..2687846 1 NC_008596.1 identified by match to protein family HMM PF01022; match to protein family HMM PF07848; ArsR family transcriptional regulator 2687846 4533956 MSMEG_2606 Mycobacterium smegmatis str. MC2 155 ArsR family transcriptional regulator YP_886943.1 2687544 D 246196 CDS YP_886944.1 118472628 4537278 2687927..2688613 1 NC_008596.1 identified by match to protein family HMM PF01891; cobalamin biosynthesis protein CbiM 2688613 cbiM 4537278 cbiM Mycobacterium smegmatis str. MC2 155 cobalamin biosynthesis protein CbiM YP_886944.1 2687927 D 246196 CDS YP_886945.1 118469985 4533108 2688610..2688948 1 NC_008596.1 cobalt transporter CbiM 2688948 4533108 MSMEG_2608 Mycobacterium smegmatis str. MC2 155 cobalt transporter CbiM YP_886945.1 2688610 D 246196 CDS YP_886946.1 118471267 4532141 2688950..2689729 1 NC_008596.1 identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454; cobalt ABC transporter permease 2689729 cbiQ 4532141 cbiQ Mycobacterium smegmatis str. MC2 155 cobalt ABC transporter permease YP_886946.1 2688950 D 246196 CDS YP_886947.1 118472336 4534227 2689726..2690475 1 NC_008596.1 identified by match to protein family HMM PF00005; cobalt transporter ATP-binding subunit 2690475 4534227 MSMEG_2610 Mycobacterium smegmatis str. MC2 155 cobalt transporter ATP-binding subunit YP_886947.1 2689726 D 246196 CDS YP_886948.1 118472887 4534030 complement(2690486..2691871) 1 NC_008596.1 catalyzes the reduction of mycothione or glutathione to mycothione or glutathione disulfide; mycothione reductase 2691871 4534030 MSMEG_2611 Mycobacterium smegmatis str. MC2 155 mycothione reductase YP_886948.1 2690486 R 246196 CDS YP_886949.1 118473820 4531630 complement(2691876..2692907) 1 NC_008596.1 hypothetical protein 2692907 4531630 MSMEG_2612 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886949.1 2691876 R 246196 CDS YP_886950.1 118470048 4534593 2693158..2694690 1 NC_008596.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 2694690 mqo 4534593 mqo Mycobacterium smegmatis str. MC2 155 malate:quinone oxidoreductase YP_886950.1 2693158 D 246196 CDS YP_886951.1 118472908 4533777 2694704..2695177 1 NC_008596.1 identified by match to protein family HMM PF00583; ElaA protein 2695177 4533777 MSMEG_2614 Mycobacterium smegmatis str. MC2 155 ElaA protein YP_886951.1 2694704 D 246196 CDS YP_886952.1 118470093 4532968 2695174..2697057 1 NC_008596.1 identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728; chelatase 2697057 4532968 MSMEG_2615 Mycobacterium smegmatis str. MC2 155 chelatase YP_886952.1 2695174 D 246196 CDS YP_886953.1 118472197 4530855 2697091..2697684 1 NC_008596.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 2697684 cobO 4530855 cobO Mycobacterium smegmatis str. MC2 155 cob(I)yrinic acid a,c-diamide adenosyltransferase YP_886953.1 2697091 D 246196 CDS YP_886954.1 118468399 4534788 2697720..2699096 1 NC_008596.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 2699096 cobB 4534788 cobB Mycobacterium smegmatis str. MC2 155 cobyrinic acid a,c-diamide synthase YP_886954.1 2697720 D 246196 CDS YP_886955.1 118472829 4537053 2699162..2700370 1 NC_008596.1 identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; match to protein family HMM TIGR01470; uroporphyrin-III C-methyltransferase 2700370 cobA 4537053 cobA Mycobacterium smegmatis str. MC2 155 uroporphyrin-III C-methyltransferase YP_886955.1 2699162 D 246196 CDS YP_886956.1 118471791 4536362 2700404..2701951 1 NC_008596.1 identified by match to protein family HMM PF07690; efflux protein 2701951 4536362 MSMEG_2619 Mycobacterium smegmatis str. MC2 155 efflux protein YP_886956.1 2700404 D 246196 CDS YP_886957.1 118469370 4535884 2701968..2702672 1 NC_008596.1 hypothetical protein 2702672 4535884 MSMEG_2620 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886957.1 2701968 D 246196 CDS YP_886958.1 118472270 4534796 2702707..2704464 1 NC_008596.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 2704464 proS 4534796 proS Mycobacterium smegmatis str. MC2 155 prolyl-tRNA synthetase YP_886958.1 2702707 D 246196 CDS YP_886959.1 118467364 4534049 complement(2704485..2704958) 1 NC_008596.1 hypothetical protein 2704958 4534049 MSMEG_2622 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886959.1 2704485 R 246196 CDS YP_886960.1 118467883 4535258 complement(2704955..2705503) 1 NC_008596.1 identified by match to protein family HMM TIGR01409; Tat pathway signal sequence domain-containing protein 2705503 4535258 MSMEG_2623 Mycobacterium smegmatis str. MC2 155 Tat pathway signal sequence domain-containing protein YP_886960.1 2704955 R 246196 CDS YP_886961.1 118473512 4533874 2705700..2706245 1 NC_008596.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 2706245 4533874 MSMEG_2624 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886961.1 2705700 D 246196 CDS YP_886962.1 118470868 4536800 2706242..2707273 1 NC_008596.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 2707273 nusA 4536800 nusA Mycobacterium smegmatis str. MC2 155 transcription elongation factor NusA YP_886962.1 2706242 D 246196 CDS YP_886963.1 118470438 4532229 2707322..2707672 1 NC_008596.1 identified by match to protein family HMM PF04296; hypothetical protein 2707672 4532229 MSMEG_2626 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886963.1 2707322 D 246196 CDS YP_886964.1 118473023 4532344 complement(2707937..2708785) 1 NC_008596.1 hypothetical protein 2708785 4532344 MSMEG_2627 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886964.1 2707937 R 246196 CDS YP_886965.1 118469118 4535331 2708747..2710579 1 NC_008596.1 identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF04760; match to protein family HMM TIGR00231; match to protein family HMM TIGR00487; translation initiation factor IF-2 2710579 infB 4535331 infB Mycobacterium smegmatis str. MC2 155 translation initiation factor IF-2 YP_886965.1 2708747 D 246196 CDS YP_886966.1 118472364 4531616 2710579..2711049 1 NC_008596.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 2711049 rbfA 4531616 rbfA Mycobacterium smegmatis str. MC2 155 ribosome-binding factor A YP_886966.1 2710579 D 246196 CDS YP_886967.1 118473809 4531619 2711052..2712074 1 NC_008596.1 identified by match to protein family HMM PF01368; match to protein family HMM PF02272; DHH family protein 2712074 4531619 MSMEG_2630 Mycobacterium smegmatis str. MC2 155 DHH family protein YP_886967.1 2711052 D 246196 CDS YP_886968.1 118469333 4535923 2712067..2713434 1 NC_008596.1 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 2713434 4535923 MSMEG_2631 Mycobacterium smegmatis str. MC2 155 MATE efflux family protein YP_886968.1 2712067 D 246196 CDS YP_886969.1 118467740 4535639 complement(2713440..2714060) 1 NC_008596.1 identified by match to protein family HMM PF01209; SAM-dependent methyltransferase 2714060 4535639 MSMEG_2632 Mycobacterium smegmatis str. MC2 155 SAM-dependent methyltransferase YP_886969.1 2713440 R 246196 CDS YP_886970.1 118468595 4532374 complement(2714104..2714925) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2714925 4532374 MSMEG_2633 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_886970.1 2714104 R 246196 CDS YP_886971.1 118470619 4532977 complement(2714946..2715989) 1 NC_008596.1 hypothetical protein 2715989 4532977 MSMEG_2634 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886971.1 2714946 R 246196 CDS YP_886972.1 118471557 4532205 complement(2716010..2716903) 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 2716903 4532205 MSMEG_2635 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_886972.1 2716010 R 246196 CDS YP_886973.1 118471153 4530943 complement(2717025..2718056) 1 NC_008596.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 2718056 4530943 MSMEG_2636 Mycobacterium smegmatis str. MC2 155 LacI family transcriptional regulator YP_886973.1 2717025 R 246196 CDS YP_886974.1 118474016 4533429 2718150..2719415 1 NC_008596.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; oxidoreductase, Gfo/Idh/MocA family protein 2719415 4533429 MSMEG_2637 Mycobacterium smegmatis str. MC2 155 oxidoreductase, Gfo/Idh/MocA family protein YP_886974.1 2718150 D 246196 CDS YP_886975.1 118468320 4533799 2719412..2720602 1 NC_008596.1 identified by match to protein family HMM PF06187; hypothetical protein 2720602 4533799 MSMEG_2638 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886975.1 2719412 D 246196 CDS YP_886976.1 118470134 4534505 2720599..2721432 1 NC_008596.1 identified by match to protein family HMM PF01261; 3-dehydroshikimate dehydratase 2721432 4534505 MSMEG_2640 Mycobacterium smegmatis str. MC2 155 3-dehydroshikimate dehydratase YP_886976.1 2720599 D 246196 CDS YP_886977.1 118472317 4532905 complement(2721419..2722243) 1 NC_008596.1 identified by match to protein family HMM PF00892; integral membrane protein 2722243 4532905 MSMEG_2639 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_886977.1 2721419 R 246196 CDS YP_886978.1 118469041 4536855 complement(2722400..2723158) 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2723158 4536855 MSMEG_2641 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_886978.1 2722400 R 246196 CDS YP_886979.1 118473844 4531998 2723196..2723471 1 NC_008596.1 hypothetical protein 2723471 4531998 MSMEG_2642 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886979.1 2723196 D 246196 CDS YP_886980.1 118468613 4535011 2723468..2724031 1 NC_008596.1 hypothetical protein 2724031 4535011 MSMEG_2643 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886980.1 2723468 D 246196 CDS YP_886981.1 118467979 4535161 complement(2724054..2725727) 1 NC_008596.1 identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976; hydrolase 2725727 4535161 MSMEG_2644 Mycobacterium smegmatis str. MC2 155 hydrolase YP_886981.1 2724054 R 246196 CDS YP_886982.1 118468975 4533539 complement(2725764..2726348) 1 NC_008596.1 hypothetical protein 2726348 4533539 MSMEG_2645 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886982.1 2725764 R 246196 CDS YP_886983.1 118470313 4535191 complement(2726511..2727722) 1 NC_008596.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; mini-circle transposase for 2727722 4535191 MSMEG_2646 Mycobacterium smegmatis str. MC2 155 mini-circle transposase for YP_886983.1 2726511 R 246196 CDS YP_886984.1 118467567 4532857 2727996..2728961 1 NC_008596.1 identified by match to protein family HMM PF00149; metallophosphoesterase 2728961 4532857 MSMEG_2647 Mycobacterium smegmatis str. MC2 155 metallophosphoesterase YP_886984.1 2727996 D 246196 CDS YP_886985.1 118471293 4532187 2728958..2729623 1 NC_008596.1 identified by match to protein family HMM PF01648; Sfp-type phosphopantetheinyl transferase 2729623 4532187 MSMEG_2648 Mycobacterium smegmatis str. MC2 155 Sfp-type phosphopantetheinyl transferase YP_886985.1 2728958 D 246196 CDS YP_886986.1 118472061 4536701 2729620..2730531 1 NC_008596.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 2730531 truB 4536701 truB Mycobacterium smegmatis str. MC2 155 tRNA pseudouridine synthase B YP_886986.1 2729620 D 246196 CDS YP_886987.1 118473527 4533627 complement(2730551..2731765) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase 2731765 4533627 MSMEG_2650 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_886987.1 2730551 R 246196 CDS YP_886988.1 118471631 4536506 complement(2731781..2732938) 1 NC_008596.1 identified by similarity to SP:P40402; alkanesulfonate monooxygenase 2732938 4536506 MSMEG_2651 Mycobacterium smegmatis str. MC2 155 alkanesulfonate monooxygenase YP_886988.1 2731781 R 246196 CDS YP_886989.1 118473748 4537353 complement(2733015..2733725) 1 NC_008596.1 identified by match to protein family HMM PF01325; match to protein family HMM PF02742; match to protein family HMM PF04023; iron repressor protein 2733725 4537353 MSMEG_2652 Mycobacterium smegmatis str. MC2 155 iron repressor protein YP_886989.1 2733015 R 246196 CDS YP_886990.1 118467591 4531407 2733807..2734784 1 NC_008596.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 2734784 ribF 4531407 ribF Mycobacterium smegmatis str. MC2 155 bifunctional riboflavin kinase/FMN adenylyltransferase YP_886990.1 2733807 D 246196 CDS YP_886991.1 118471582 4534444 2734886..2735155 1 NC_008596.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 2735155 rpsO 4534444 rpsO Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S15 YP_886991.1 2734886 D 246196 CDS YP_886992.1 118473707 4533255 2735260..2735667 1 NC_008596.1 LppU protein 2735667 4533255 MSMEG_2655 Mycobacterium smegmatis str. MC2 155 LppU protein YP_886992.1 2735260 D 246196 CDS YP_886993.1 118471281 4532155 2735997..2738288 1 NC_008596.1 identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; match to protein family HMM TIGR02696; polynucleotide phosphorylase 2738288 gpsI 4532155 gpsI Mycobacterium smegmatis str. MC2 155 polynucleotide phosphorylase YP_886993.1 2735997 D 246196 CDS YP_886994.1 118472683 4532948 2738311..2739615 1 NC_008596.1 identified by match to protein family HMM PF00675; match to protein family HMM PF05193; peptidase, M16 family protein 2739615 4532948 MSMEG_2657 Mycobacterium smegmatis str. MC2 155 peptidase, M16 family protein YP_886994.1 2738311 D 246196 CDS YP_886995.1 118473563 4530997 2739634..2740515 1 NC_008596.1 identified by match to protein family HMM PF00144; match to protein family HMM TIGR01409; beta-lactamase 2740515 4530997 MSMEG_2658 Mycobacterium smegmatis str. MC2 155 beta-lactamase YP_886995.1 2739634 D 246196 CDS YP_886996.1 118468812 4534068 complement(2740567..2741682) 1 NC_008596.1 identified by match to protein family HMM PF01262; match to protein family HMM PF02826; match to protein family HMM PF05222; match to protein family HMM TIGR00518; alanine dehydrogenase 2741682 ald 4534068 ald Mycobacterium smegmatis str. MC2 155 alanine dehydrogenase YP_886996.1 2740567 R 246196 CDS YP_886997.1 118467849 4535476 2741778..2742293 1 NC_008596.1 identified by match to protein family HMM PF01037; AsnC family transcriptional regulator 2742293 4535476 MSMEG_2660 Mycobacterium smegmatis str. MC2 155 AsnC family transcriptional regulator YP_886997.1 2741778 D 246196 CDS YP_886998.1 118468138 4535226 complement(2742304..2743065) 1 NC_008596.1 identified by match to protein family HMM PF03724; hypothetical protein 2743065 4535226 MSMEG_2661 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886998.1 2742304 R 246196 CDS YP_886999.1 118472443 4533584 2743220..2743516 1 NC_008596.1 hypothetical protein 2743516 4533584 MSMEG_2662 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_886999.1 2743220 D 246196 CDS YP_887000.1 118470235 4536754 complement(2743713..2745449) 1 NC_008596.1 identified by match to protein family HMM PF02720; hypothetical protein 2745449 4536754 MSMEG_2663 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887000.1 2743713 R 246196 CDS YP_887001.1 118469338 4535928 2745690..2746427 1 NC_008596.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 2746427 dapB 4535928 dapB Mycobacterium smegmatis str. MC2 155 dihydrodipicolinate reductase YP_887001.1 2745690 D 246196 CDS YP_887002.1 118473113 4531839 2746424..2746891 1 NC_008596.1 hypothetical protein 2746891 4531839 MSMEG_2665 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887002.1 2746424 D 246196 CDS YP_887003.1 118472988 4532268 2746888..2747343 1 NC_008596.1 multimeric flavodoxin WrbA 2747343 4532268 MSMEG_2666 Mycobacterium smegmatis str. MC2 155 multimeric flavodoxin WrbA YP_887003.1 2746888 D 246196 CDS YP_887004.1 118467696 4537334 2747354..2747815 1 NC_008596.1 hypothetical protein 2747815 4537334 MSMEG_2668 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887004.1 2747354 D 246196 CDS YP_887005.1 118467428 4536044 complement(2747809..2748729) 1 NC_008596.1 identified by match to protein family HMM PF03328; HpcH/HpaI aldolase/citrate lyase 2748729 4536044 MSMEG_2667 Mycobacterium smegmatis str. MC2 155 HpcH/HpaI aldolase/citrate lyase YP_887005.1 2747809 R 246196 CDS YP_887006.1 118468031 4531388 complement(2748751..2749500) 1 NC_008596.1 identified by match to protein family HMM PF01738; hydrolase 2749500 4531388 MSMEG_2669 Mycobacterium smegmatis str. MC2 155 hydrolase YP_887006.1 2748751 R 246196 CDS YP_887007.1 118467946 4533426 2749543..2750343 1 NC_008596.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 2750343 thyA 4533426 thyA Mycobacterium smegmatis str. MC2 155 thymidylate synthase YP_887007.1 2749543 D 246196 CDS YP_887008.1 118474019 4533432 2750372..2750836 1 NC_008596.1 identified by match to protein family HMM PF00186; dihydrofolate reductase 2750836 folA 4533432 folA Mycobacterium smegmatis str. MC2 155 dihydrofolate reductase YP_887008.1 2750372 D 246196 CDS YP_887009.1 118469113 4535325 2750910..2751554 1 NC_008596.1 acyl-CoA synthetase 2751554 4535325 MSMEG_2672 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_887009.1 2750910 D 246196 CDS YP_887010.1 118470400 4533461 2751938..2753338 1 NC_008596.1 identified by similarity to SP:P37248; match to protein family HMM PF00665; ISMsm8, transposase 2753338 4533461 MSMEG_2675 Mycobacterium smegmatis str. MC2 155 ISMsm8, transposase YP_887010.1 2751938 D 246196 CDS YP_887011.1 118470833 4532519 complement(2753996..2754322) 1 NC_008596.1 similar at the nucleotide level to IS1137 in the IS Finder database.; identified by match to protein family HMM PF01527; IS1137, transposase orfA 2754322 4532519 MSMEG_2676 Mycobacterium smegmatis str. MC2 155 IS1137, transposase orfA YP_887011.1 2753996 R 246196 CDS YP_887012.1 118470127 4534498 complement(2754283..2755590) 1 NC_008596.1 identified by match to protein family HMM PF03176; large membrane protein 2755590 4534498 MSMEG_2677 Mycobacterium smegmatis str. MC2 155 large membrane protein YP_887012.1 2754283 R 246196 CDS YP_887013.1 118467728 4534011 complement(2755771..2755920) 1 NC_008596.1 hypothetical protein 2755920 4534011 MSMEG_2678 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887013.1 2755771 R 246196 CDS YP_887014.1 118472563 4534147 2756022..2757218 1 NC_008596.1 identified by match to protein family HMM PF06224; hypothetical protein 2757218 4534147 MSMEG_2679 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887014.1 2756022 D 246196 CDS YP_887015.1 118470257 4537149 complement(2757263..2758669) 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid transporter 2758669 4537149 MSMEG_2680 Mycobacterium smegmatis str. MC2 155 amino acid transporter YP_887015.1 2757263 R 246196 CDS YP_887016.1 118467626 4534200 complement(2758699..2759628) 1 NC_008596.1 identified by match to protein family HMM PF00561; match to protein family HMM TIGR01250; proline imino-peptidase 2759628 4534200 MSMEG_2681 Mycobacterium smegmatis str. MC2 155 proline imino-peptidase YP_887016.1 2758699 R 246196 CDS YP_887017.1 118471940 4536202 2759690..2760487 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptional regulator 2760487 4536202 MSMEG_2682 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_887017.1 2759690 D 246196 CDS YP_887018.1 118473148 4532589 2760518..2761270 1 NC_008596.1 flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase 2761270 thyX 4532589 thyX Mycobacterium smegmatis str. MC2 155 FAD-dependent thymidylate synthase YP_887018.1 2760518 D 246196 CDS YP_887019.1 118470003 4532741 2761296..2762198 1 NC_008596.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 2762198 dapA 4532741 dapA Mycobacterium smegmatis str. MC2 155 dihydrodipicolinate synthase YP_887019.1 2761296 D 246196 CDS YP_887020.1 118472017 4533618 2762206..2763882 1 NC_008596.1 identified by match to protein family HMM PF00753; match to protein family HMM PF07521; metallo-beta-lactamase superfamily protein 2763882 4533618 MSMEG_2685 Mycobacterium smegmatis str. MC2 155 metallo-beta-lactamase superfamily protein YP_887020.1 2762206 D 246196 CDS YP_887021.1 118469345 4533168 complement(2763894..2764331) 1 NC_008596.1 hypothetical protein 2764331 4533168 MSMEG_2686 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887021.1 2763894 R 246196 CDS YP_887022.1 118468526 4535351 complement(2764345..2765172) 1 NC_008596.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2765172 4535351 MSMEG_2687 Mycobacterium smegmatis str. MC2 155 3-ketoacyl-ACP reductase YP_887022.1 2764345 R 246196 CDS YP_887023.1 118467990 4531310 complement(2765195..2765509) 1 NC_008596.1 identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase domain-containing protein 2765509 4531310 MSMEG_2688 Mycobacterium smegmatis str. MC2 155 antibiotic biosynthesis monooxygenase domain-containing protein YP_887023.1 2765195 R 246196 CDS YP_887024.1 118473964 4533035 2765524..2768304 1 NC_008596.1 identified by match to protein family HMM PF01580; DNA translocase FtsK 2768304 4533035 MSMEG_2690 Mycobacterium smegmatis str. MC2 155 DNA translocase FtsK YP_887024.1 2765524 D 246196 CDS YP_887025.1 118468659 4535235 complement(2765743..2765871) 1 NC_008596.1 hypothetical protein 2765871 4535235 MSMEG_2689 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887025.1 2765743 R 246196 CDS YP_887026.1 118469898 4533217 complement(2768315..2768797) 1 NC_008596.1 catalyzes the conversion of l-glutamate to a-N-acetyl-l-glutamate in arginine biosynthesis; N-acetylglutamate synthase 2768797 4533217 MSMEG_2691 Mycobacterium smegmatis str. MC2 155 N-acetylglutamate synthase YP_887026.1 2768315 R 246196 CDS YP_887027.1 118471132 4531819 2768903..2769508 1 NC_008596.1 identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2769508 pgsA 4531819 pgsA Mycobacterium smegmatis str. MC2 155 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_887027.1 2768903 D 246196 CDS YP_887028.1 118469320 4533385 2769486..2769974 1 NC_008596.1 identified by match to protein family HMM PF02464; match to protein family HMM TIGR00199; competence-damaged protein 2769974 4533385 MSMEG_2693 Mycobacterium smegmatis str. MC2 155 competence-damaged protein YP_887028.1 2769486 D 246196 CDS YP_887029.1 118467423 4536039 2770097..2770435 1 NC_008596.1 identified by match to protein family HMM PF01381; XRE family transcriptional regulator 2770435 4536039 MSMEG_2694 Mycobacterium smegmatis str. MC2 155 XRE family transcriptional regulator YP_887029.1 2770097 D 246196 CDS YP_887030.1 118468923 4537457 2770675..2771514 1 NC_008596.1 identified by match to protein family HMM PF04012; hypothetical protein 2771514 4537457 MSMEG_2695 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887030.1 2770675 D 246196 CDS YP_887031.1 118473582 4534855 2771533..2772369 1 NC_008596.1 membrane alanine rich protein 2772369 4534855 MSMEG_2696 Mycobacterium smegmatis str. MC2 155 membrane alanine rich protein YP_887031.1 2771533 D 246196 CDS YP_887032.1 118468317 4533796 complement(2772377..2772784) 1 NC_008596.1 hypothetical protein 2772784 4533796 MSMEG_2697 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887032.1 2772377 R 246196 CDS YP_887033.1 118470516 4537570 complement(2772781..2773191) 1 NC_008596.1 identified by match to protein family HMM PF07366; match to protein family HMM PF07858; hypothetical protein 2773191 4537570 MSMEG_2698 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887033.1 2772781 R 246196 CDS YP_887034.1 118468760 4534249 2773253..2774425 1 NC_008596.1 hypothetical protein 2774425 4534249 MSMEG_2699 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887034.1 2773253 D 246196 CDS YP_887035.1 118469337 4535927 2774435..2774629 1 NC_008596.1 hypothetical protein 2774629 4535927 MSMEG_2700 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887035.1 2774435 D 246196 CDS YP_887036.1 118471535 4537615 2774673..2774876 1 NC_008596.1 hypothetical protein 2774876 4537615 MSMEG_2701 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887036.1 2774673 D 246196 CDS YP_887037.1 118469860 4530898 complement(2774889..2776013) 1 NC_008596.1 identified by match to protein family HMM PF01924; match to protein family HMM TIGR00075; hydrogenase expression/formation protein HypD 2776013 hypD 4530898 hypD Mycobacterium smegmatis str. MC2 155 hydrogenase expression/formation protein HypD YP_887037.1 2774889 R 246196 CDS YP_887038.1 118469442 4534818 complement(2776054..2776338) 1 NC_008596.1 identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074; hydrogenase assembly chaperone HypC/HupF 2776338 hypC 4534818 hypC Mycobacterium smegmatis str. MC2 155 hydrogenase assembly chaperone HypC/HupF YP_887038.1 2776054 R 246196 CDS YP_887039.1 118468235 4537420 complement(2777828..2778901) 1 NC_008596.1 identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124; hydrogenase expression/formation protein HypE 2778901 hypE 4537420 hypE Mycobacterium smegmatis str. MC2 155 hydrogenase expression/formation protein HypE YP_887039.1 2777828 R 246196 CDS YP_887040.1 118469463 4535726 complement(2778898..2779581) 1 NC_008596.1 phosphoheptose isomerase 2779581 gmhA 4535726 gmhA Mycobacterium smegmatis str. MC2 155 phosphoheptose isomerase YP_887040.1 2778898 R 246196 CDS YP_887041.1 118467570 4532860 complement(2779578..2780315) 1 NC_008596.1 hypothetical protein 2780315 4532860 MSMEG_2707 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887041.1 2779578 R 246196 CDS YP_887042.1 118469560 4537506 2780291..2780443 1 NC_008596.1 hypothetical protein 2780443 4537506 MSMEG_2709 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887042.1 2780291 D 246196 CDS YP_887043.1 118469223 4533277 complement(2780312..2780503) 1 NC_008596.1 hypothetical protein 2780503 4533277 MSMEG_2708 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887043.1 2780312 R 246196 CDS YP_887044.1 118472020 4533621 complement(2780500..2781228) 1 NC_008596.1 hypothetical protein 2781228 4533621 MSMEG_2710 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887044.1 2780500 R 246196 CDS YP_887045.1 118469275 4532245 complement(2781233..2783524) 1 NC_008596.1 identified by match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HMM TIGR00143; [NiFe] hydrogenase maturation protein HypF 2783524 hypF 4532245 hypF Mycobacterium smegmatis str. MC2 155 [NiFe] hydrogenase maturation protein HypF YP_887045.1 2781233 R 246196 CDS YP_887046.1 118470538 4532992 complement(2783521..2783781) 1 NC_008596.1 identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074; hydrogenase assembly chaperone HypC/HupF 2783781 hypC 4532992 hypC Mycobacterium smegmatis str. MC2 155 hydrogenase assembly chaperone HypC/HupF YP_887046.1 2783521 R 246196 CDS YP_887047.1 118467705 4537712 complement(2783783..2784265) 1 NC_008596.1 identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072; peptidase M52, hydrogen uptake protein 2784265 4537712 MSMEG_2713 Mycobacterium smegmatis str. MC2 155 peptidase M52, hydrogen uptake protein YP_887047.1 2783783 R 246196 CDS YP_887048.1 118472826 4537050 complement(2784269..2784388) 1 NC_008596.1 hypothetical protein 2784388 4537050 MSMEG_2714 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887048.1 2784269 R 246196 CDS YP_887049.1 118472032 4534113 complement(2784414..2785739) 1 NC_008596.1 hypothetical protein 2785739 4534113 MSMEG_2715 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887049.1 2784414 R 246196 CDS YP_887050.1 118468893 4536686 complement(2785736..2786392) 1 NC_008596.1 hypothetical protein 2786392 4536686 MSMEG_2716 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887050.1 2785736 R 246196 CDS YP_887051.1 118469049 4536863 complement(2786389..2786949) 1 NC_008596.1 hypothetical protein 2786949 4536863 MSMEG_2717 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887051.1 2786389 R 246196 CDS YP_887052.1 118468815 4534071 complement(2787037..2787960) 1 NC_008596.1 identified by match to protein family HMM PF01106; (Fe-S)-binding protein 2787960 4534071 MSMEG_2718 Mycobacterium smegmatis str. MC2 155 (Fe-S)-binding protein YP_887052.1 2787037 R 246196 CDS YP_887053.1 118472539 4532665 complement(2787964..2789760) 1 NC_008596.1 identified by match to protein family HMM PF00374; hydrogen:quinone oxidoreductase 2789760 4532665 MSMEG_2719 Mycobacterium smegmatis str. MC2 155 hydrogen:quinone oxidoreductase YP_887053.1 2787964 R 246196 CDS YP_887054.1 118471434 4535109 complement(2789863..2790918) 1 NC_008596.1 identified by match to protein family HMM PF01058; NADH ubiquinone oxidoreductase, 20 kDa subunit 2790918 4535109 MSMEG_2720 Mycobacterium smegmatis str. MC2 155 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_887054.1 2789863 R 246196 CDS YP_887055.1 118470704 4532541 complement(2791028..2791807) 1 NC_008596.1 identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073; hydrogenase nickel incorporation protein HypB 2791807 hypB 4532541 hypB Mycobacterium smegmatis str. MC2 155 hydrogenase nickel incorporation protein HypB YP_887055.1 2791028 R 246196 CDS YP_887056.1 118470165 4534343 complement(2791809..2792138) 1 NC_008596.1 identified by match to protein family HMM PF01155; hydrogenase nickel incorporation protein HypA 2792138 hypA 4534343 hypA Mycobacterium smegmatis str. MC2 155 hydrogenase nickel incorporation protein HypA YP_887056.1 2791809 R 246196 CDS YP_887057.1 118472151 4532488 2792363..2793412 1 NC_008596.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 2793412 recA 4532488 recA Mycobacterium smegmatis str. MC2 155 recombinase A YP_887057.1 2792363 D 246196 CDS YP_887058.1 118473993 4531437 2793381..2793947 1 NC_008596.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 2793947 recX 4531437 recX Mycobacterium smegmatis str. MC2 155 recombination regulator RecX YP_887058.1 2793381 D 246196 CDS YP_887059.1 118469776 4535800 complement(2794005..2794904) 1 NC_008596.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; glutamate transporter permease GluD 2794904 4535800 MSMEG_2725 Mycobacterium smegmatis str. MC2 155 glutamate transporter permease GluD YP_887059.1 2794005 R 246196 CDS YP_887060.1 118473702 4533250 complement(2794901..2795581) 1 NC_008596.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; glutamate permease 2795581 4533250 MSMEG_2726 Mycobacterium smegmatis str. MC2 155 glutamate permease YP_887060.1 2794901 R 246196 CDS YP_887061.1 118470248 4536767 complement(2795600..2796421) 1 NC_008596.1 identified by match to protein family HMM PF00497; glutamate binding protein 2796421 4536767 MSMEG_2727 Mycobacterium smegmatis str. MC2 155 glutamate binding protein YP_887061.1 2795600 R 246196 CDS YP_887062.1 118472100 4537481 complement(2796447..2797232) 1 NC_008596.1 identified by match to protein family HMM PF00005; glutamate transport ATP-binding protein GluA 2797232 4537481 MSMEG_2728 Mycobacterium smegmatis str. MC2 155 glutamate transport ATP-binding protein GluA YP_887062.1 2796447 R 246196 CDS YP_887063.1 118471123 4533482 2797337..2798875 1 NC_008596.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 2798875 miaB 4533482 miaB Mycobacterium smegmatis str. MC2 155 (dimethylallyl)adenosine tRNA methylthiotransferase YP_887063.1 2797337 D 246196 CDS YP_887064.1 118470103 4534938 complement(2799515..2800879) 1 NC_008596.1 identified by match to protein family HMM PF03993; DNA repair ATPase 2800879 4534938 MSMEG_2731 Mycobacterium smegmatis str. MC2 155 DNA repair ATPase YP_887064.1 2799515 R 246196 CDS YP_887065.1 118467468 4536613 2801006..2801893 1 NC_008596.1 hypothetical protein 2801893 4536613 MSMEG_2732 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887065.1 2801006 D 246196 CDS YP_887066.1 118468888 4536681 2801903..2802589 1 NC_008596.1 hypothetical protein 2802589 4536681 MSMEG_2733 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887066.1 2801903 D 246196 CDS YP_887067.1 118469507 4533335 2802586..2803494 1 NC_008596.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 2803494 miaA 4533335 miaA Mycobacterium smegmatis str. MC2 155 tRNA delta(2)-isopentenylpyrophosphate transferase YP_887067.1 2802586 D 246196 CDS YP_887068.1 118471346 4533230 2803499..2804374 1 NC_008596.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 2804374 dapF 4533230 dapF Mycobacterium smegmatis str. MC2 155 diaminopimelate epimerase YP_887068.1 2803499 D 246196 CDS YP_887069.1 118473800 4531279 2804420..2805832 1 NC_008596.1 identified by match to protein family HMM PF01926; GTP-binding protein 2805832 4531279 MSMEG_2736 Mycobacterium smegmatis str. MC2 155 GTP-binding protein YP_887069.1 2804420 D 246196 CDS YP_887070.1 118472555 4534139 complement(2805853..2807556) 1 NC_008596.1 PPE family protein 2807556 4534139 MSMEG_2737 Mycobacterium smegmatis str. MC2 155 PPE family protein YP_887070.1 2805853 R 246196 CDS YP_887071.1 118471440 4535115 complement(2807642..2809933) 1 NC_008596.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR00509; biotin sulfoxide reductase 2809933 4535115 MSMEG_2738 Mycobacterium smegmatis str. MC2 155 biotin sulfoxide reductase YP_887071.1 2807642 R 246196 CDS YP_887072.1 118470552 4533006 2810192..2812627 1 NC_008596.1 hypothetical protein 2812627 4533006 MSMEG_2739 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887072.1 2810192 D 246196 CDS YP_887073.1 118468004 4531324 complement(2812637..2813368) 1 NC_008596.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 2813368 lexA 4531324 lexA Mycobacterium smegmatis str. MC2 155 LexA repressor YP_887073.1 2812637 R 246196 CDS YP_887074.1 118469723 4537597 2813453..2813581 1 NC_008596.1 hypothetical protein 2813581 4537597 MSMEG_2741 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887074.1 2813453 D 246196 CDS YP_887075.1 118468533 4535358 2813632..2814189 1 NC_008596.1 identified by match to protein family HMM PF01476; DNA-damage-inducible protein 2814189 4535358 MSMEG_2742 Mycobacterium smegmatis str. MC2 155 DNA-damage-inducible protein YP_887075.1 2813632 D 246196 CDS YP_887076.1 118468724 4532794 2814351..2814803 1 NC_008596.1 identified by match to protein family HMM PF03477; match to protein family HMM TIGR00244; NrdR family transcriptional regulator 2814803 nrdR 4532794 nrdR Mycobacterium smegmatis str. MC2 155 NrdR family transcriptional regulator YP_887076.1 2814351 D 246196 CDS YP_887077.1 118472830 4537054 complement(2814822..2815511) 1 NC_008596.1 identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654; thymidylate synthase 2815511 4537054 MSMEG_2744 Mycobacterium smegmatis str. MC2 155 thymidylate synthase YP_887077.1 2814822 R 246196 CDS YP_887078.1 118471616 4536529 complement(2816586..2817632) 1 NC_008596.1 identified by match to protein family HMM PF01908; hypothetical protein 2817632 4536529 MSMEG_2746 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887078.1 2816586 R 246196 CDS YP_887079.1 118468100 4536029 complement(2818671..2820086) 1 NC_008596.1 catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase 2820086 sthA 4536029 sthA Mycobacterium smegmatis str. MC2 155 soluble pyridine nucleotide transhydrogenase YP_887079.1 2818671 R 246196 CDS YP_887080.1 118468826 4535403 2820136..2821314 1 NC_008596.1 hypothetical protein 2821314 4535403 MSMEG_2749 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887080.1 2820136 D 246196 CDS YP_887081.1 118468273 4535760 complement(2821344..2822036) 1 NC_008596.1 identified by match to protein family HMM PF01325; match to protein family HMM PF02742; match to protein family HMM PF04023; iron-dependent repressor IdeR 2822036 4535760 MSMEG_2750 Mycobacterium smegmatis str. MC2 155 iron-dependent repressor IdeR YP_887081.1 2821344 R 246196 CDS YP_887082.1 118472360 4531611 complement(2822116..2822265) 1 NC_008596.1 hypothetical protein 2822265 4531611 MSMEG_2751 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887082.1 2822116 R 246196 CDS YP_887083.1 118472772 4531863 complement(2822265..2823224) 1 NC_008596.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma factors in this cluster are active during stationary phase; RNA polymerase sigma factor SigB 2823224 4531863 MSMEG_2752 Mycobacterium smegmatis str. MC2 155 RNA polymerase sigma factor SigB YP_887083.1 2822265 R 246196 CDS YP_887084.1 118468312 4533791 complement(2823372..2823800) 1 NC_008596.1 hypothetical protein 2823800 4533791 MSMEG_2753 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887084.1 2823372 R 246196 CDS YP_887085.1 118469977 4535751 2823878..2824114 1 NC_008596.1 hypothetical protein 2824114 4535751 MSMEG_2754 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887085.1 2823878 D 246196 CDS YP_887086.1 118471083 4537526 complement(2824118..2825110) 1 NC_008596.1 identified by match to protein family HMM PF03631; hypothetical protein 2825110 4537526 MSMEG_2755 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887086.1 2824118 R 246196 CDS YP_887087.1 118473772 4535129 complement(2825183..2825374) 1 NC_008596.1 hypothetical protein 2825374 4535129 MSMEG_2756 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887087.1 2825183 R 246196 CDS YP_887088.1 118471978 4536164 2825532..2825897 1 NC_008596.1 identified by match to protein family HMM PF06108; glutathione S-transferase domain-containing protein 2825897 4536164 MSMEG_2757 Mycobacterium smegmatis str. MC2 155 glutathione S-transferase domain-containing protein YP_887088.1 2825532 D 246196 CDS YP_887089.1 118472038 4535383 2826103..2826228 1 NC_008596.1 hypothetical protein 2826228 4535383 MSMEG_2759 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887089.1 2826103 D 246196 CDS YP_887090.1 118469122 4535335 complement(2826225..2827625) 1 NC_008596.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; RNA polymerase sigma factor 2827625 4535335 MSMEG_2758 Mycobacterium smegmatis str. MC2 155 RNA polymerase sigma factor YP_887090.1 2826225 R 246196 CDS YP_887091.1 118471335 4534848 complement(2827821..2828639) 1 NC_008596.1 identified by match to protein family HMM PF00480; polyphosphate glucokinase 2828639 4534848 MSMEG_2760 Mycobacterium smegmatis str. MC2 155 polyphosphate glucokinase YP_887091.1 2827821 R 246196 CDS YP_887092.1 118470498 4537182 2828808..2829659 1 NC_008596.1 identified by match to protein family HMM PF00459; inositol-1-monophosphatase 2829659 4537182 MSMEG_2762 Mycobacterium smegmatis str. MC2 155 inositol-1-monophosphatase YP_887092.1 2828808 D 246196 CDS YP_887093.1 118470963 4534535 complement(2829633..2830283) 1 NC_008596.1 secreted alanine rich protein 2830283 4534535 MSMEG_2761 Mycobacterium smegmatis str. MC2 155 secreted alanine rich protein YP_887093.1 2829633 R 246196 CDS YP_887094.1 118470036 4531651 2830449..2830751 1 NC_008596.1 hypothetical protein 2830751 4531651 MSMEG_2763 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887094.1 2830449 D 246196 CDS YP_887095.1 118473048 4533201 complement(2830772..2831251) 1 NC_008596.1 hypothetical protein 2831251 4533201 MSMEG_2764 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887095.1 2830772 R 246196 CDS YP_887096.1 118467578 4532868 2831277..2831741 1 NC_008596.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 2831741 dut 4532868 dut Mycobacterium smegmatis str. MC2 155 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_887096.1 2831277 D 246196 CDS YP_887097.1 118473654 4533523 2831738..2832532 1 NC_008596.1 hypothetical protein 2832532 4533523 MSMEG_2766 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887097.1 2831738 D 246196 CDS YP_887098.1 118467886 4535261 complement(2832575..2833276) 1 NC_008596.1 hypothetical protein 2833276 4535261 MSMEG_2767 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887098.1 2832575 R 246196 CDS YP_887099.1 118474012 4530972 2833409..2833780 1 NC_008596.1 identified by match to protein family HMM PF01336; OB-fold nucleic acid binding domain-containing protein 2833780 4530972 MSMEG_2768 Mycobacterium smegmatis str. MC2 155 OB-fold nucleic acid binding domain-containing protein YP_887099.1 2833409 D 246196 CDS YP_887100.1 118473532 4533632 2833777..2834520 1 NC_008596.1 integral membrane alanine and leucine rich protein 2834520 4533632 MSMEG_2770 Mycobacterium smegmatis str. MC2 155 integral membrane alanine and leucine rich protein YP_887100.1 2833777 D 246196 CDS YP_887101.1 118472642 4537661 complement(2834517..2835185) 1 NC_008596.1 identified by match to protein family HMM PF02080; match to protein family HMM PF02254; TrkB protein 2835185 4537661 MSMEG_2769 Mycobacterium smegmatis str. MC2 155 TrkB protein YP_887101.1 2834517 R 246196 CDS YP_887102.1 118468196 4534410 complement(2835223..2835897) 1 NC_008596.1 identified by match to protein family HMM PF02254; TrkA protein 2835897 4534410 MSMEG_2771 Mycobacterium smegmatis str. MC2 155 TrkA protein YP_887102.1 2835223 R 246196 CDS YP_887103.1 118470810 4531920 2836004..2837998 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 2837998 4531920 MSMEG_2772 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_887103.1 2836004 D 246196 CDS YP_887104.1 118473429 4534120 2837995..2839188 1 NC_008596.1 cg2084; identified by match to protein family HMM PF01938; RNA methyltransferase 2839188 4534120 MSMEG_2773 Mycobacterium smegmatis str. MC2 155 RNA methyltransferase YP_887104.1 2837995 D 246196 CDS YP_887105.1 118473031 4532352 complement(2839197..2840276) 1 NC_008596.1 identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 2840276 4532352 MSMEG_2774 Mycobacterium smegmatis str. MC2 155 diguanylate cyclase YP_887105.1 2839197 R 246196 CDS YP_887106.1 118471006 4533499 2840636..2841931 1 NC_008596.1 identified by match to protein family HMM PF00999; match to protein family HMM PF06965; match to protein family HMM TIGR00773; Na+/H+ antiporter NhaA 2841931 nhaA 4533499 nhaA Mycobacterium smegmatis str. MC2 155 Na+/H+ antiporter NhaA YP_887106.1 2840636 D 246196 CDS YP_887107.1 118469477 4534451 2841956..2843872 1 NC_008596.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2843872 dxs 4534451 dxs Mycobacterium smegmatis str. MC2 155 1-deoxy-D-xylulose-5-phosphate synthase YP_887107.1 2841956 D 246196 CDS YP_887108.1 118470119 4534490 2843910..2844824 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 2844824 4534490 MSMEG_2777 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_887108.1 2843910 D 246196 CDS YP_887109.1 118467912 4532645 complement(2844852..2846099) 1 NC_008596.1 identified by match to protein family HMM PF00570; match to protein family HMM PF01612; ribonuclease D 2846099 4532645 MSMEG_2778 Mycobacterium smegmatis str. MC2 155 ribonuclease D YP_887109.1 2844852 R 246196 CDS YP_887110.1 118473529 4533629 complement(2846102..2846683) 1 NC_008596.1 hypothetical protein 2846683 4533629 MSMEG_2779 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887110.1 2846102 R 246196 CDS YP_887111.1 118467722 4534005 2846805..2847866 1 NC_008596.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 2847866 hemE 4534005 hemE Mycobacterium smegmatis str. MC2 155 uroporphyrinogen decarboxylase YP_887111.1 2846805 D 246196 CDS YP_887112.1 118467902 4531258 2847863..2849224 1 NC_008596.1 catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase 2849224 hemG 4531258 hemG Mycobacterium smegmatis str. MC2 155 protoporphyrinogen oxidase YP_887112.1 2847863 D 246196 CDS YP_887113.1 118468878 4533763 2849229..2849924 1 NC_008596.1 identified by match to protein family HMM PF06778; hypothetical protein 2849924 4533763 MSMEG_2782 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887113.1 2849229 D 246196 CDS YP_887114.1 118470261 4537153 2849980..2850276 1 NC_008596.1 hypothetical protein 2850276 4537153 MSMEG_2783 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887114.1 2849980 D 246196 CDS YP_887115.1 118470615 4532973 complement(2850324..2850737) 1 NC_008596.1 identified by match to protein family HMM PF01641; match to protein family HMM TIGR00357; methionine-R-sulfoxide reductase 2850737 msrB 4532973 msrB Mycobacterium smegmatis str. MC2 155 methionine-R-sulfoxide reductase YP_887115.1 2850324 R 246196 CDS YP_887116.1 118469940 4535851 complement(2850789..2852081) 1 NC_008596.1 integral membrane protein 2852081 4535851 MSMEG_2785 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_887116.1 2850789 R 246196 CDS YP_887117.1 118473494 4532127 complement(2852103..2853692) 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 2853692 4532127 MSMEG_2786 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_887117.1 2852103 R 246196 CDS YP_887118.1 118472351 4531602 complement(2853712..2854494) 1 NC_008596.1 identified by match to protein family HMM PF01872; hypothetical protein 2854494 4531602 MSMEG_2787 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887118.1 2853712 R 246196 CDS YP_887119.1 118469882 4536574 2854529..2855566 1 NC_008596.1 identified by match to protein family HMM PF03969; ATP/GTP-binding integral membrane protein 2855566 4536574 MSMEG_2788 Mycobacterium smegmatis str. MC2 155 ATP/GTP-binding integral membrane protein YP_887119.1 2854529 D 246196 CDS YP_887120.1 118471485 4531886 complement(2855568..2856098) 1 NC_008596.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 2856098 4531886 MSMEG_2789 Mycobacterium smegmatis str. MC2 155 GNAT family acetyltransferase YP_887120.1 2855568 R 246196 CDS YP_887121.1 118470526 4536118 complement(2856103..2856627) 1 NC_008596.1 hypothetical protein 2856627 4536118 MSMEG_2790 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887121.1 2856103 R 246196 CDS YP_887122.1 118469663 4535425 complement(2856675..2857100) 1 NC_008596.1 identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 2857100 4535425 MSMEG_2791 Mycobacterium smegmatis str. MC2 155 pyridoxamine 5'-phosphate oxidase YP_887122.1 2856675 R 246196 CDS YP_887123.1 118467977 4535159 complement(2857143..2857877) 1 NC_008596.1 identified by match to protein family HMM PF02861; Clp amino terminal domain-containing protein 2857877 4535159 MSMEG_2792 Mycobacterium smegmatis str. MC2 155 Clp amino terminal domain-containing protein YP_887123.1 2857143 R 246196 CDS YP_887124.1 118469082 4537637 2857979..2859376 1 NC_008596.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor-type histidine kinase PrrB 2859376 4537637 MSMEG_2793 Mycobacterium smegmatis str. MC2 155 sensor-type histidine kinase PrrB YP_887124.1 2857979 D 246196 CDS YP_887125.1 118470972 4534544 complement(2859380..2860042) 1 NC_008596.1 identified by similarity to SP:P33233; match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 2860042 4534544 MSMEG_2794 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_887125.1 2859380 R 246196 CDS YP_887126.1 118471290 4532184 2860101..2861342 1 NC_008596.1 identified by match to protein family HMM PF07690; transmembrane transporter 2861342 4532184 MSMEG_2795 Mycobacterium smegmatis str. MC2 155 transmembrane transporter YP_887126.1 2860101 D 246196 CDS YP_887127.1 118473068 4534620 2861362..2862573 1 NC_008596.1 identified by match to protein family HMM PF03595; integral membrane protein 2862573 4534620 MSMEG_2796 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_887127.1 2861362 D 246196 CDS YP_887128.1 118467384 4533855 complement(2862579..2863511) 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 2863511 4533855 MSMEG_2797 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_887128.1 2862579 R 246196 CDS YP_887129.1 118470203 4532497 2863788..2864840 1 NC_008596.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 2864840 4532497 MSMEG_2799 Mycobacterium smegmatis str. MC2 155 phospho-2-dehydro-3-deoxyheptonate aldolase YP_887129.1 2863788 D 246196 CDS YP_887130.1 118468459 4536907 complement(2864837..2865649) 1 NC_008596.1 hypothetical protein 2865649 4536907 MSMEG_2798 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887130.1 2864837 R 246196 CDS YP_887131.1 118471422 4532805 complement(2865884..2866366) 1 NC_008596.1 identified by match to protein family HMM PF03358; NADPH-dependent FMN reductase 2866366 4532805 MSMEG_2800 Mycobacterium smegmatis str. MC2 155 NADPH-dependent FMN reductase YP_887131.1 2865884 R 246196 CDS YP_887132.1 118472442 4533583 2866445..2866564 1 NC_008596.1 hypothetical protein 2866564 4533583 MSMEG_2801 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887132.1 2866445 D 246196 CDS YP_887133.1 118472495 4532446 2867294..2867707 1 NC_008596.1 hypothetical protein 2867707 4532446 MSMEG_2802 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887133.1 2867294 D 246196 CDS YP_887134.1 118468539 4536090 2867745..2867888 1 NC_008596.1 hypothetical protein 2867888 4536090 MSMEG_2803 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887134.1 2867745 D 246196 CDS YP_887135.1 118468960 4532623 2868002..2869096 1 NC_008596.1 identified by match to protein family HMM PF02518; match to protein family HMM PF07730; match to protein family HMM TIGR00229; two-component system sensor kinase 2869096 4532623 MSMEG_2804 Mycobacterium smegmatis str. MC2 155 two-component system sensor kinase YP_887135.1 2868002 D 246196 CDS YP_887136.1 118471777 4536348 2869035..2869382 1 NC_008596.1 two-component system response regulator 2869382 4536348 MSMEG_2806 Mycobacterium smegmatis str. MC2 155 two-component system response regulator YP_887136.1 2869035 D 246196 CDS YP_887137.1 118469580 4531454 complement(2869279..2870340) 1 NC_008596.1 identified by similarity to GB:CAD18826.1; ISMsm5, transposase 2870340 4531454 MSMEG_2805 Mycobacterium smegmatis str. MC2 155 ISMsm5, transposase YP_887137.1 2869279 R 246196 CDS YP_887138.1 118471049 4536751 2870371..2870862 1 NC_008596.1 identified by match to protein family HMM PF00196; two-component system response regulator 2870862 4536751 MSMEG_2807 Mycobacterium smegmatis str. MC2 155 two-component system response regulator YP_887138.1 2870371 D 246196 CDS YP_887139.1 118468869 4533754 2871045..2871920 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short-chain dehydrogenase/reductase SDR 2871920 4533754 MSMEG_2808 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase SDR YP_887139.1 2871045 D 246196 CDS YP_887140.1 118473256 4537317 2871947..2872393 1 NC_008596.1 hypothetical protein 2872393 4537317 MSMEG_2809 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887140.1 2871947 D 246196 CDS YP_887141.1 118470223 4533914 2872390..2873601 1 NC_008596.1 identified by match to protein family HMM PF07690; major facilitator superfamily protein 2873601 4533914 MSMEG_2810 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_887141.1 2872390 D 246196 CDS YP_887142.1 118471087 4537530 complement(2873675..2874541) 1 NC_008596.1 identified by match to protein family HMM PF00296; hydride transferase 1 2874541 4537530 MSMEG_2811 Mycobacterium smegmatis str. MC2 155 hydride transferase 1 YP_887142.1 2873675 R 246196 CDS YP_887143.1 118471173 4534959 complement(2874564..2875436) 1 NC_008596.1 C-5 sterol desaturase 2875436 4534959 MSMEG_2812 Mycobacterium smegmatis str. MC2 155 C-5 sterol desaturase YP_887143.1 2874564 R 246196 CDS YP_887144.1 118473882 4531130 2875590..2876747 1 NC_008596.1 identified by match to protein family HMM PF02518; match to protein family HMM PF07730; sensor kinase 2876747 4531130 MSMEG_2813 Mycobacterium smegmatis str. MC2 155 sensor kinase YP_887144.1 2875590 D 246196 CDS YP_887145.1 118470380 4532327 2880208..2880504 1 NC_008596.1 ABC transporter ATP-binding protein/permease 2880504 4532327 MSMEG_2817 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein/permease YP_887145.1 2880208 D 246196 CDS YP_887146.1 118467906 4531262 complement(2880573..2881502) 1 NC_008596.1 This gene is similar at the protein level with ISRru1 in the IS Finder database.; identified by similarity to GP:16551202; match to protein family HMM PF00665; ISMsm1, transposase orfB 2881502 4531262 MSMEG_2818 Mycobacterium smegmatis str. MC2 155 ISMsm1, transposase orfB YP_887146.1 2880573 R 246196 CDS YP_887147.1 118468848 4535621 complement(2881499..2881834) 1 NC_008596.1 similar at the protein level to ISRru1 in the IS Finder database.; identified by similarity to GP:16551202; match to protein family HMM PF01527; ISMsm1, transposase orfA 2881834 4535621 MSMEG_2819 Mycobacterium smegmatis str. MC2 155 ISMsm1, transposase orfA YP_887147.1 2881499 R 246196 CDS YP_887148.1 118472862 4531346 2882879..2884048 1 NC_008596.1 hypothetical protein 2884048 4531346 MSMEG_2820 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887148.1 2882879 D 246196 CDS YP_887149.1 118472603 4536881 2885869..2887335 1 NC_008596.1 identified by similarity to GP:2935133; match to protein family HMM PF01609; IS1549, transposase 2887335 4536881 MSMEG_2824 Mycobacterium smegmatis str. MC2 155 IS1549, transposase YP_887149.1 2885869 D 246196 CDS YP_887150.1 118471206 4533808 complement(2888948..2890171) 1 NC_008596.1 hypothetical protein 2890171 4533808 MSMEG_2826 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887150.1 2888948 R 246196 CDS YP_887151.1 118469098 4535290 complement(2890162..2890698) 1 NC_008596.1 hypothetical protein 2890698 4535290 MSMEG_2827 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887151.1 2890162 R 246196 CDS YP_887152.1 118472738 4532367 2890417..2891739 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 2891739 4532367 MSMEG_2828 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_887152.1 2890417 D 246196 CDS YP_887153.1 118467797 4535973 complement(2891747..2892448) 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 2892448 4535973 MSMEG_2829 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_887153.1 2891747 R 246196 CDS YP_887154.1 118469011 4536062 complement(2892622..2893989) 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; ISMsm4, transposase 2893989 4536062 MSMEG_2830 Mycobacterium smegmatis str. MC2 155 ISMsm4, transposase YP_887154.1 2892622 R 246196 CDS YP_887155.1 118471902 4536240 complement(2894143..2894352) 1 NC_008596.1 hypothetical protein 2894352 4536240 MSMEG_2831 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887155.1 2894143 R 246196 CDS YP_887156.1 118469846 4532737 complement(2894648..2894974) 1 NC_008596.1 hypothetical protein 2894974 4532737 MSMEG_2832 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887156.1 2894648 R 246196 CDS YP_887157.1 118471647 4536484 2896046..2898433 1 NC_008596.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; nitrate reductase NarB 2898433 4536484 MSMEG_2837 Mycobacterium smegmatis str. MC2 155 nitrate reductase NarB YP_887157.1 2896046 D 246196 CDS YP_887158.1 118471941 4536204 2898445..2898927 1 NC_008596.1 hypothetical protein 2898927 4536204 MSMEG_2838 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887158.1 2898445 D 246196 CDS YP_887159.1 118472339 4534230 2899010..2901400 1 NC_008596.1 identified by match to protein family HMM PF00575; transcriptional accessory protein 2901400 4534230 MSMEG_2839 Mycobacterium smegmatis str. MC2 155 transcriptional accessory protein YP_887159.1 2899010 D 246196 CDS YP_887160.1 118471337 4534850 complement(2901404..2902102) 1 NC_008596.1 hypothetical protein 2902102 4534850 MSMEG_2840 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887160.1 2901404 R 246196 CDS YP_887161.1 118472810 4536664 complement(2902133..2903578) 1 NC_008596.1 monooxygenase 2903578 4536664 MSMEG_2841 Mycobacterium smegmatis str. MC2 155 monooxygenase YP_887161.1 2902133 R 246196 CDS YP_887162.1 118471252 4531528 complement(2903622..2904917) 1 NC_008596.1 nitrilotriacetate monooxygenase component A 2904917 ssuD 4531528 ssuD Mycobacterium smegmatis str. MC2 155 nitrilotriacetate monooxygenase component A YP_887162.1 2903622 R 246196 CDS YP_887163.1 118469052 4536866 complement(2904914..2906269) 1 NC_008596.1 nitrilotriacetate monooxygenase component A 2906269 ssuD 4536866 ssuD Mycobacterium smegmatis str. MC2 155 nitrilotriacetate monooxygenase component A YP_887163.1 2904914 R 246196 CDS YP_887164.1 118470938 4533673 complement(2906266..2907879) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2907879 4533673 MSMEG_2844 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_887164.1 2906266 R 246196 CDS YP_887165.1 118473330 4530989 complement(2907894..2908766) 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 2908766 4530989 MSMEG_2845 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_887165.1 2907894 R 246196 CDS YP_887166.1 118472226 4531477 complement(2908763..2909731) 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 2909731 4531477 MSMEG_2846 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_887166.1 2908763 R 246196 CDS YP_887167.1 118470386 4532333 complement(2909734..2911320) 1 NC_008596.1 identified by match to protein family HMM PF00496; extracellular solute-binding protein 2911320 4532333 MSMEG_2847 Mycobacterium smegmatis str. MC2 155 extracellular solute-binding protein YP_887167.1 2909734 R 246196 CDS YP_887168.1 118467478 4536996 complement(2911537..2912946) 1 NC_008596.1 identified by match to protein family HMM PF07690; transmembrane efflux protein 2912946 4536996 MSMEG_2848 Mycobacterium smegmatis str. MC2 155 transmembrane efflux protein YP_887168.1 2911537 R 246196 CDS YP_887169.1 118473074 4533148 2913021..2913422 1 NC_008596.1 identified by match to protein family HMM PF01638; transcriptional regulatory protein 2913422 4533148 MSMEG_2849 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_887169.1 2913021 D 246196 CDS YP_887170.1 118471441 4535116 2913508..2913930 1 NC_008596.1 identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; cell entry (mce) related family protein 2913930 4535116 MSMEG_2850 Mycobacterium smegmatis str. MC2 155 cell entry (mce) related family protein YP_887170.1 2913508 D 246196 CDS YP_887171.1 118469054 4536868 complement(2913944..2914399) 1 NC_008596.1 hypothetical protein 2914399 4536868 MSMEG_2851 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887171.1 2913944 R 246196 CDS YP_887172.1 118469749 4532034 complement(2914474..2915304) 1 NC_008596.1 identified by match to protein family HMM PF00106; 3-oxoacyl-ACP reductase 2915304 4532034 MSMEG_2852 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_887172.1 2914474 R 246196 CDS YP_887173.1 118469944 4530907 2915518..2916330 1 NC_008596.1 identified by match to protein family HMM PF02405; hypothetical protein 2916330 4530907 MSMEG_2853 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887173.1 2915518 D 246196 CDS YP_887174.1 118473565 4530999 2916342..2917187 1 NC_008596.1 identified by match to protein family HMM PF02405; hypothetical protein 2917187 4530999 MSMEG_2854 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887174.1 2916342 D 246196 CDS YP_887175.1 118467504 4537391 2917214..2918401 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 2918401 4537391 MSMEG_2855 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_887175.1 2917214 D 246196 CDS YP_887176.1 118468491 4537680 2918398..2919429 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 2919429 4537680 MSMEG_2856 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_887176.1 2918398 D 246196 CDS YP_887177.1 118468094 4536022 2919429..2920505 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 2920505 4536022 MSMEG_2857 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_887177.1 2919429 D 246196 CDS YP_887178.1 118470369 4532316 2920508..2921965 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor mce family protein 2921965 4532316 MSMEG_2858 Mycobacterium smegmatis str. MC2 155 virulence factor mce family protein YP_887178.1 2920508 D 246196 CDS YP_887179.1 118469727 4537602 2921962..2923152 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 2923152 4537602 MSMEG_2859 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_887179.1 2921962 D 246196 CDS YP_887180.1 118471570 4534432 2923152..2924639 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor mce family protein 2924639 4534432 MSMEG_2860 Mycobacterium smegmatis str. MC2 155 virulence factor mce family protein YP_887180.1 2923152 D 246196 CDS YP_887181.1 118472784 4533127 complement(2924650..2925162) 1 NC_008596.1 hypothetical protein 2925162 4533127 MSMEG_2861 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887181.1 2924650 R 246196 CDS YP_887182.1 118470485 4537169 2925290..2925682 1 NC_008596.1 hypothetical protein 2925682 4537169 MSMEG_2862 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887182.1 2925290 D 246196 CDS YP_887183.1 118467808 4535985 2925664..2926083 1 NC_008596.1 hypothetical protein 2926083 4535985 MSMEG_2863 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887183.1 2925664 D 246196 CDS YP_887184.1 118470784 4531148 2926271..2926948 1 NC_008596.1 hypothetical protein 2926948 4531148 MSMEG_2864 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887184.1 2926271 D 246196 CDS YP_887185.1 118471039 4536741 2926945..2927517 1 NC_008596.1 hypothetical protein 2927517 4536741 MSMEG_2865 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887185.1 2926945 D 246196 CDS YP_887186.1 118472296 4532768 complement(2927518..2928129) 1 NC_008596.1 identified by match to protein family HMM PF03061; thioesterase 2928129 4532768 MSMEG_2866 Mycobacterium smegmatis str. MC2 155 thioesterase YP_887186.1 2927518 R 246196 CDS YP_887187.1 118470452 4534515 complement(2928126..2929694) 1 NC_008596.1 catalyzes transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; 3-ketosteroid-delta-1-dehydrogenase 2929694 4534515 MSMEG_2867 Mycobacterium smegmatis str. MC2 155 3-ketosteroid-delta-1-dehydrogenase YP_887187.1 2928126 R 246196 CDS YP_887188.1 118469505 4533333 2929813..2930508 1 NC_008596.1 identified by match to protein family HMM PF03551; PadR family transcriptional regulator 2930508 4533333 MSMEG_2868 Mycobacterium smegmatis str. MC2 155 PadR family transcriptional regulator YP_887188.1 2929813 D 246196 CDS YP_887189.1 118468719 4532789 complement(2930521..2932197) 1 NC_008596.1 initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; 3-ketosteroid-delta-1-dehydrogenase 2932197 4532789 MSMEG_2869 Mycobacterium smegmatis str. MC2 155 3-ketosteroid-delta-1-dehydrogenase YP_887189.1 2930521 R 246196 CDS YP_887190.1 118468408 4534550 2932334..2933494 1 NC_008596.1 identified by match to protein family HMM PF00355; oxygenase KshA 2933494 4534550 MSMEG_2870 Mycobacterium smegmatis str. MC2 155 oxygenase KshA YP_887190.1 2932334 D 246196 CDS YP_887191.1 118471881 4536257 2933491..2933769 1 NC_008596.1 hypothetical protein 2933769 4536257 MSMEG_2871 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887191.1 2933491 D 246196 CDS YP_887192.1 118470809 4531919 2933753..2934544 1 NC_008596.1 identified by match to protein family HMM PF00106; short-chain dehydrogenase/reductase SDR 2934544 4531919 MSMEG_2872 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase SDR YP_887192.1 2933753 D 246196 CDS YP_887193.1 118469577 4531451 2934557..2936146 1 NC_008596.1 identified by match to protein family HMM PF00890; match to protein family HMM PF01266; hypothetical protein 2936146 4531451 MSMEG_2873 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887193.1 2934557 D 246196 CDS YP_887194.1 118467569 4532859 complement(2936210..2937286) 1 NC_008596.1 hypothetical protein 2937286 4532859 MSMEG_2874 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887194.1 2936210 R 246196 CDS YP_887195.1 118469112 4535324 complement(2937393..2938373) 1 NC_008596.1 identified by match to protein family HMM PF07859; esterase 2938373 4535324 MSMEG_2875 Mycobacterium smegmatis str. MC2 155 esterase YP_887195.1 2937393 R 246196 CDS YP_887196.1 118471539 4537620 complement(2938382..2939260) 1 NC_008596.1 identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 2939260 4537620 MSMEG_2876 Mycobacterium smegmatis str. MC2 155 oxidoreductase, short chain dehydrogenase/reductase YP_887196.1 2938382 R 246196 CDS YP_887197.1 118469167 4534753 complement(2939257..2939754) 1 NC_008596.1 hypothetical protein 2939754 4534753 MSMEG_2877 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887197.1 2939257 R 246196 CDS YP_887198.1 118471821 4536314 complement(2939825..2940826) 1 NC_008596.1 identified by match to protein family HMM PF00441; acyl-CoA dehydrogenase 2940826 4536314 MSMEG_2878 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_887198.1 2939825 R 246196 CDS YP_887199.1 118472308 4532896 complement(2940823..2941974) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; acyl-CoA dehydrogenase 2941974 4532896 MSMEG_2879 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_887199.1 2940823 R 246196 CDS YP_887200.1 118469144 4532560 complement(2941974..2942756) 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase 2942756 4532560 MSMEG_2880 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_887200.1 2941974 R 246196 CDS YP_887201.1 118471465 4534384 complement(2942785..2944206) 1 NC_008596.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 2944206 4534384 MSMEG_2881 Mycobacterium smegmatis str. MC2 155 aldehyde dehydrogenase YP_887201.1 2942785 R 246196 CDS YP_887202.1 118473250 4537310 complement(2944225..2945340) 1 NC_008596.1 identified by match to protein family HMM PF00107; 5-exo-alcohol dehydrogenase 2945340 4537310 MSMEG_2882 Mycobacterium smegmatis str. MC2 155 5-exo-alcohol dehydrogenase YP_887202.1 2944225 R 246196 CDS YP_887203.1 118472739 4532368 complement(2945429..2946994) 1 NC_008596.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 2946994 4532368 MSMEG_2883 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_887203.1 2945429 R 246196 CDS YP_887204.1 118469676 4535438 2947132..2949054 1 NC_008596.1 cyclohexanone monooxygenase 2949054 4535438 MSMEG_2884 Mycobacterium smegmatis str. MC2 155 cyclohexanone monooxygenase YP_887204.1 2947132 D 246196 CDS YP_887205.1 118472314 4532902 2949051..2949938 1 NC_008596.1 identified by match to protein family HMM PF00106; short-chain dehydrogenase/reductase SDR 2949938 4532902 MSMEG_2885 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase SDR YP_887205.1 2949051 D 246196 CDS YP_887206.1 118468660 4535236 complement(2949940..2950560) 1 NC_008596.1 identified by match to protein family HMM PF07876; stress responsive A/B barrel domain family protein 2950560 4535236 MSMEG_2886 Mycobacterium smegmatis str. MC2 155 stress responsive A/B barrel domain family protein YP_887206.1 2949940 R 246196 CDS YP_887207.1 118470515 4537569 complement(2950566..2950952) 1 NC_008596.1 hypothetical protein 2950952 4537569 MSMEG_2887 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887207.1 2950566 R 246196 CDS YP_887208.1 118468266 4533999 2951016..2952254 1 NC_008596.1 identified by match to protein family HMM PF00724; NADH:flavin oxidoreductase 2952254 4533999 MSMEG_2889 Mycobacterium smegmatis str. MC2 155 NADH:flavin oxidoreductase YP_887208.1 2951016 D 246196 CDS YP_887209.1 118467684 4537322 complement(2952197..2953147) 1 NC_008596.1 identified by match to protein family HMM PF07859; lipase 2953147 4537322 MSMEG_2888 Mycobacterium smegmatis str. MC2 155 lipase YP_887209.1 2952197 R 246196 CDS YP_887210.1 118471933 4536195 complement(2953144..2954040) 1 NC_008596.1 identified by match to protein family HMM PF01614; transcriptional regulator 2954040 4536195 MSMEG_2890 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_887210.1 2953144 R 246196 CDS YP_887211.1 118468892 4536685 complement(2954224..2955126) 1 NC_008596.1 identified by match to protein family HMM PF00903; biphenyl-2,3-diol 1,2-dioxygenase 2955126 4536685 MSMEG_2891 Mycobacterium smegmatis str. MC2 155 biphenyl-2,3-diol 1,2-dioxygenase YP_887211.1 2954224 R 246196 CDS YP_887212.1 118470991 4531911 complement(2955143..2956324) 1 NC_008596.1 identified by match to protein family HMM PF08028; pigment production hydroxylase 2956324 4531911 MSMEG_2892 Mycobacterium smegmatis str. MC2 155 pigment production hydroxylase YP_887212.1 2955143 R 246196 CDS YP_887213.1 118469972 4535746 complement(2956384..2957439) 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; oxidoreductase, NAD/FAD-binding 2957439 4535746 MSMEG_2893 Mycobacterium smegmatis str. MC2 155 oxidoreductase, NAD/FAD-binding YP_887213.1 2956384 R 246196 CDS YP_887214.1 118469047 4536861 2957572..2959194 1 NC_008596.1 identified by match to protein family HMM PF01266; steroid monooxygenase 2959194 4536861 MSMEG_2894 Mycobacterium smegmatis str. MC2 155 steroid monooxygenase YP_887214.1 2957572 D 246196 CDS YP_887215.1 118474045 4531726 2959295..2960089 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain oxidoreductase 2960089 4531726 MSMEG_2895 Mycobacterium smegmatis str. MC2 155 short chain oxidoreductase YP_887215.1 2959295 D 246196 CDS YP_887216.1 118471147 4530937 2960097..2960960 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 2960960 4530937 MSMEG_2896 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887216.1 2960097 D 246196 CDS YP_887217.1 118471869 4536284 2961061..2961381 1 NC_008596.1 hypothetical protein 2961381 4536284 MSMEG_2897 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887217.1 2961061 D 246196 CDS YP_887218.1 118472600 4536878 2961476..2962030 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2962030 4536878 MSMEG_2898 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_887218.1 2961476 D 246196 CDS YP_887219.1 118467673 4536939 2962139..2962834 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF07993; short chain dehydrogenase 2962834 4536939 MSMEG_2899 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_887219.1 2962139 D 246196 CDS YP_887220.1 118469589 4531094 2962927..2963490 1 NC_008596.1 hypothetical protein 2963490 4531094 MSMEG_2901 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887220.1 2962927 D 246196 CDS YP_887221.1 118471665 4536464 complement(2963487..2964347) 1 NC_008596.1 identified by match to protein family HMM PF00561; 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase 2964347 4536464 MSMEG_2900 Mycobacterium smegmatis str. MC2 155 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase YP_887221.1 2963487 R 246196 CDS YP_887222.1 118472627 4537277 2964456..2965199 1 NC_008596.1 identified by match to protein family HMM PF00795; hydrolase 2965199 4537277 MSMEG_2902 Mycobacterium smegmatis str. MC2 155 hydrolase YP_887222.1 2964456 D 246196 CDS YP_887223.1 118469269 4532239 complement(2967055..2967447) 1 NC_008596.1 MmcI protein 2967447 4532239 MSMEG_2904 Mycobacterium smegmatis str. MC2 155 MmcI protein YP_887223.1 2967055 R 246196 CDS YP_887224.1 118469951 4530914 2967713..2968099 1 NC_008596.1 identified by match to protein family HMM PF01638; transcriptional regulator 2968099 4530914 MSMEG_2905 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_887224.1 2967713 D 246196 CDS YP_887225.1 118467537 4535999 2968218..2969042 1 NC_008596.1 hypothetical protein 2969042 4535999 MSMEG_2906 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887225.1 2968218 D 246196 CDS YP_887226.1 118472171 4535697 complement(2969066..2970517) 1 NC_008596.1 identified by match to protein family HMM PF01232; match to protein family HMM PF08125; oxidoreductase YeiQ 2970517 4535697 MSMEG_2907 Mycobacterium smegmatis str. MC2 155 oxidoreductase YeiQ YP_887226.1 2969066 R 246196 CDS YP_887227.1 118472556 4534140 complement(2970514..2971437) 1 NC_008596.1 identified by match to protein family HMM PF00294; 2-keto-3-deoxygluconate kinase 2971437 4534140 MSMEG_2908 Mycobacterium smegmatis str. MC2 155 2-keto-3-deoxygluconate kinase YP_887227.1 2970514 R 246196 CDS YP_887228.1 118467815 4534566 complement(2971434..2972642) 1 NC_008596.1 identified by match to protein family HMM PF01188; match to protein family HMM PF02746; starvation-sensing protein RspA 2972642 4534566 MSMEG_2909 Mycobacterium smegmatis str. MC2 155 starvation-sensing protein RspA YP_887228.1 2971434 R 246196 CDS YP_887229.1 118470867 4536799 2972708..2973415 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 2973415 4536799 MSMEG_2910 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_887229.1 2972708 D 246196 CDS YP_887230.1 118469433 4534329 2973561..2974910 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; integral membrane transporter 2974910 4534329 MSMEG_2911 Mycobacterium smegmatis str. MC2 155 integral membrane transporter YP_887230.1 2973561 D 246196 CDS YP_887231.1 118470047 4534592 2974935..2976311 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; inner membrane metabolite transporter YdfJ 2976311 4534592 MSMEG_2912 Mycobacterium smegmatis str. MC2 155 inner membrane metabolite transporter YdfJ YP_887231.1 2974935 D 246196 CDS YP_887232.1 118469040 4536854 2976308..2977282 1 NC_008596.1 identified by match to protein family HMM PF00107; L-idonate 5-dehydrogenase 2977282 4536854 MSMEG_2914 Mycobacterium smegmatis str. MC2 155 L-idonate 5-dehydrogenase YP_887232.1 2976308 D 246196 CDS YP_887233.1 118467551 4535504 complement(2977263..2978126) 1 NC_008596.1 identified by match to protein family HMM PF00561; hydrolase 2978126 4535504 MSMEG_2913 Mycobacterium smegmatis str. MC2 155 hydrolase YP_887233.1 2977263 R 246196 CDS YP_887234.1 118469988 4533111 complement(2978144..2979652) 1 NC_008596.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 2979652 4533111 MSMEG_2915 Mycobacterium smegmatis str. MC2 155 sensor histidine kinase YP_887234.1 2978144 R 246196 CDS YP_887235.1 118471523 4537234 complement(2979652..2980419) 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator, PhoP family protein 2980419 4537234 MSMEG_2916 Mycobacterium smegmatis str. MC2 155 DNA-binding response regulator, PhoP family protein YP_887235.1 2979652 R 246196 CDS YP_887236.1 118472986 4532266 complement(2980507..2981214) 1 NC_008596.1 hypothetical protein 2981214 4532266 MSMEG_2917 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887236.1 2980507 R 246196 CDS YP_887237.1 118469148 4532565 complement(2981309..2982106) 1 NC_008596.1 identified by match to protein family HMM PF00106; short-chain dehydrogenase/reductase SDR 2982106 4532565 MSMEG_2918 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase SDR YP_887237.1 2981309 R 246196 CDS YP_887238.1 118467489 4537007 complement(2982192..2983193) 1 NC_008596.1 identified by match to protein family HMM PF02558; 2-dehydropantoate 2-reductase 2983193 4537007 MSMEG_2919 Mycobacterium smegmatis str. MC2 155 2-dehydropantoate 2-reductase YP_887238.1 2982192 R 246196 CDS YP_887239.1 118472137 4532474 2983601..2984632 1 NC_008596.1 identified by match to protein family HMM PF00248; aldo/keto reductase 2984632 4532474 MSMEG_2920 Mycobacterium smegmatis str. MC2 155 aldo/keto reductase YP_887239.1 2983601 D 246196 CDS YP_887240.1 118470210 4532504 2984629..2985426 1 NC_008596.1 identified by match to protein family HMM PF00881; NADPH-flavin oxidoreductase 2985426 4532504 MSMEG_2921 Mycobacterium smegmatis str. MC2 155 NADPH-flavin oxidoreductase YP_887240.1 2984629 D 246196 CDS YP_887241.1 118473117 4531843 complement(2985445..2986239) 1 NC_008596.1 hypothetical protein 2986239 4531843 MSMEG_2922 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887241.1 2985445 R 246196 CDS YP_887242.1 118469850 4530888 2986362..2987162 1 NC_008596.1 identified by match to protein family HMM PF00106; dehydrogenase/reductase SDR family protein member 1 2987162 4530888 MSMEG_2923 Mycobacterium smegmatis str. MC2 155 dehydrogenase/reductase SDR family protein member 1 YP_887242.1 2986362 D 246196 CDS YP_887243.1 118471750 4536397 complement(2987165..2988118) 1 NC_008596.1 identified by match to protein family HMM PF04069; permease binding-protein component 2988118 4536397 MSMEG_2924 Mycobacterium smegmatis str. MC2 155 permease binding-protein component YP_887243.1 2987165 R 246196 CDS YP_887244.1 118472643 4537662 complement(2988115..2988897) 1 NC_008596.1 identified by match to protein family HMM PF00528; permease membrane component 2988897 4537662 MSMEG_2925 Mycobacterium smegmatis str. MC2 155 permease membrane component YP_887244.1 2988115 R 246196 CDS YP_887245.1 118467743 4535642 complement(2988894..2990078) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186; glycine betaine/carnitine/choline transport ATP-binding protein opuCA 2990078 4535642 MSMEG_2926 Mycobacterium smegmatis str. MC2 155 glycine betaine/carnitine/choline transport ATP-binding protein opuCA YP_887245.1 2988894 R 246196 CDS YP_887246.1 118470325 4535203 complement(2990071..2990718) 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 2990718 4535203 MSMEG_2927 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_887246.1 2990071 R 246196 CDS YP_887247.1 118469326 4535915 2990857..2991939 1 NC_008596.1 hypothetical protein 2991939 4535915 MSMEG_2928 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887247.1 2990857 D 246196 CDS YP_887248.1 118471930 4536192 2992021..2992650 1 NC_008596.1 identified by match to protein family HMM PF03061; thioesterase 2992650 4536192 MSMEG_2929 Mycobacterium smegmatis str. MC2 155 thioesterase YP_887248.1 2992021 D 246196 CDS YP_887249.1 118470096 4532971 2992647..2993078 1 NC_008596.1 identified by match to protein family HMM TIGR02611; hypothetical protein 2993078 4532971 MSMEG_2930 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887249.1 2992647 D 246196 CDS YP_887250.1 118471368 4535275 2993163..2995217 1 NC_008596.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 2995217 thrS 4535275 thrS Mycobacterium smegmatis str. MC2 155 threonyl-tRNA synthetase YP_887250.1 2993163 D 246196 CDS YP_887251.1 118473786 4535144 2995226..2995843 1 NC_008596.1 identified by match to protein family HMM PF01230; HIT family protein hydrolase 2995843 4535144 MSMEG_2932 Mycobacterium smegmatis str. MC2 155 HIT family protein hydrolase YP_887251.1 2995226 D 246196 CDS YP_887252.1 118471181 4534967 2995840..2996508 1 NC_008596.1 identified by match to protein family HMM PF01066; phosphatidylinositol synthase 2996508 4534967 MSMEG_2933 Mycobacterium smegmatis str. MC2 155 phosphatidylinositol synthase YP_887252.1 2995840 D 246196 CDS YP_887253.1 118470475 4536785 2996505..2997419 1 NC_008596.1 acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 2997419 4536785 MSMEG_2934 Mycobacterium smegmatis str. MC2 155 lipid A biosynthesis lauroyl acyltransferase YP_887253.1 2996505 D 246196 CDS YP_887254.1 118470239 4536758 2997421..2998581 1 NC_008596.1 identified by match to protein family HMM PF00534; phosphatidylinositol alpha-mannosyltransferase 2998581 4536758 MSMEG_2935 Mycobacterium smegmatis str. MC2 155 phosphatidylinositol alpha-mannosyltransferase YP_887254.1 2997421 D 246196 CDS YP_887255.1 118468518 4535499 2998581..2999636 1 NC_008596.1 identified by match to protein family HMM PF00293; hydrolase, nudix family protein 2999636 4535499 MSMEG_2936 Mycobacterium smegmatis str. MC2 155 hydrolase, nudix family protein YP_887255.1 2998581 D 246196 CDS YP_887256.1 118468880 4533765 2999713..3000624 1 NC_008596.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 3000624 4533765 MSMEG_2937 Mycobacterium smegmatis str. MC2 155 pyridoxal biosynthesis lyase PdxS YP_887256.1 2999713 D 246196 CDS YP_887257.1 118468478 4537299 3000634..3001485 1 NC_008596.1 identified by match to protein family HMM PF02551; match to protein family HMM TIGR00189; acyl-CoA thioesterase 3001485 tesB 4537299 tesB Mycobacterium smegmatis str. MC2 155 acyl-CoA thioesterase YP_887257.1 3000634 D 246196 CDS YP_887258.1 118472587 4534368 3001482..3002063 1 NC_008596.1 with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT 3002063 4534368 MSMEG_2939 Mycobacterium smegmatis str. MC2 155 glutamine amidotransferase subunit PdxT YP_887258.1 3001482 D 246196 CDS YP_887259.1 118467795 4535717 3002244..3002999 1 NC_008596.1 identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein 3002999 4535717 MSMEG_2940 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887259.1 3002244 D 246196 CDS YP_887260.1 118471225 4534412 complement(3003003..3003653) 1 NC_008596.1 identified by match to protein family HMM PF01370; match to protein family HMM PF05368; NAD dependent epimerase/dehydratase 3003653 4534412 MSMEG_2941 Mycobacterium smegmatis str. MC2 155 NAD dependent epimerase/dehydratase YP_887260.1 3003003 R 246196 CDS YP_887261.1 118473204 4531054 complement(3003678..3004109) 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 3004109 4531054 MSMEG_2942 Mycobacterium smegmatis str. MC2 155 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein YP_887261.1 3003678 R 246196 CDS YP_887262.1 118473848 4533548 3004295..3004852 1 NC_008596.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 3004852 ruvC 4533548 ruvC Mycobacterium smegmatis str. MC2 155 Holliday junction resolvase YP_887262.1 3004295 D 246196 CDS YP_887263.1 118467715 4537723 3004849..3005436 1 NC_008596.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 3005436 ruvA 4537723 ruvA Mycobacterium smegmatis str. MC2 155 Holliday junction DNA helicase RuvA YP_887263.1 3004849 D 246196 CDS YP_887264.1 118473727 4536961 3005439..3006494 1 NC_008596.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 3006494 ruvB 4536961 ruvB Mycobacterium smegmatis str. MC2 155 Holliday junction DNA helicase RuvB YP_887264.1 3005439 D 246196 CDS YP_887265.1 118472955 4531772 3006499..3006885 1 NC_008596.1 identified by match to protein family HMM PF06993; transmembrane protein 3006885 4531772 MSMEG_2946 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_887265.1 3006499 D 246196 CDS YP_887266.1 118471021 4534477 3007026..3007814 1 NC_008596.1 identified by match to protein family HMM PF04199; polyketide cyclase/dehydrase 3007814 4534477 MSMEG_2947 Mycobacterium smegmatis str. MC2 155 polyketide cyclase/dehydrase YP_887266.1 3007026 D 246196 CDS YP_887267.1 118470505 4537558 3007814..3008629 1 NC_008596.1 identified by match to protein family HMM PF00378; 6-oxocamphor hydrolase 3008629 4537558 MSMEG_2948 Mycobacterium smegmatis str. MC2 155 6-oxocamphor hydrolase YP_887267.1 3007814 D 246196 CDS YP_887268.1 118469013 4536064 3008674..3011034 1 NC_008596.1 identified by match to protein family HMM PF01315; match to protein family HMM PF02738; carbon-monoxide dehydrogenase 3011034 4536064 MSMEG_2949 Mycobacterium smegmatis str. MC2 155 carbon-monoxide dehydrogenase YP_887268.1 3008674 D 246196 CDS YP_887269.1 118467983 4535165 3011031..3011849 1 NC_008596.1 identified by match to protein family HMM PF00941; carbon monoxide dehydrogenase, medium chain 3011849 4535165 MSMEG_2950 Mycobacterium smegmatis str. MC2 155 carbon monoxide dehydrogenase, medium chain YP_887269.1 3011031 D 246196 CDS YP_887270.1 118467870 4532892 3011842..3012327 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF01799; 2Fe-2S-binding domain-containing protein 3012327 4532892 MSMEG_2951 Mycobacterium smegmatis str. MC2 155 2Fe-2S-binding domain-containing protein YP_887270.1 3011842 D 246196 CDS YP_887271.1 118472722 4531691 3012396..3013715 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; transporter 3013715 4531691 MSMEG_2952 Mycobacterium smegmatis str. MC2 155 transporter YP_887271.1 3012396 D 246196 CDS YP_887272.1 118472979 4532259 3013795..3014115 1 NC_008596.1 identified by match to protein family HMM PF07110; match to protein family HMM TIGR02118; ethyl tert-butyl ether degradation EthD 3014115 4532259 MSMEG_2953 Mycobacterium smegmatis str. MC2 155 ethyl tert-butyl ether degradation EthD YP_887272.1 3013795 D 246196 CDS YP_887273.1 118471501 4536840 3014135..3015154 1 NC_008596.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 3015154 4536840 MSMEG_2954 Mycobacterium smegmatis str. MC2 155 LacI family transcriptional regulator YP_887273.1 3014135 D 246196 CDS YP_887274.1 118468919 4537081 3015273..3015719 1 NC_008596.1 hypothetical protein 3015719 4537081 MSMEG_2955 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887274.1 3015273 D 246196 CDS YP_887275.1 118473501 4532134 complement(3015785..3019291) 1 NC_008596.1 identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746; NAD dependent epimerase/dehydratase 3019291 4532134 MSMEG_2956 Mycobacterium smegmatis str. MC2 155 NAD dependent epimerase/dehydratase YP_887275.1 3015785 R 246196 CDS YP_887276.1 118467885 4535260 complement(3019572..3020189) 1 NC_008596.1 hypothetical protein 3020189 4535260 MSMEG_2957 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887276.1 3019572 R 246196 CDS YP_887277.1 118472800 4533143 3020304..3021023 1 NC_008596.1 hypothetical protein 3021023 4533143 MSMEG_2958 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887277.1 3020304 D 246196 CDS YP_887278.1 118470824 4532510 complement(3021057..3022397) 1 NC_008596.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 3022397 gabT 4532510 gabT Mycobacterium smegmatis str. MC2 155 4-aminobutyrate aminotransferase YP_887278.1 3021057 R 246196 CDS YP_887279.1 118471559 4532207 3022735..3023058 1 NC_008596.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 3023058 yajC 4532207 yajC Mycobacterium smegmatis str. MC2 155 preprotein translocase subunit YajC YP_887279.1 3022735 D 246196 CDS YP_887280.1 118471632 4536507 3023131..3024993 1 NC_008596.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 3024993 secD 4536507 secD Mycobacterium smegmatis str. MC2 155 preprotein translocase subunit SecD YP_887280.1 3023131 D 246196 CDS YP_887281.1 118470626 4532984 3024998..3026266 1 NC_008596.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 3026266 secF 4532984 secF Mycobacterium smegmatis str. MC2 155 preprotein translocase subunit SecF YP_887281.1 3024998 D 246196 CDS YP_887282.1 118469995 4533118 3026272..3027939 1 NC_008596.1 identified by match to protein family HMM PF00496; extracellular solute-binding protein 3027939 4533118 MSMEG_2963 Mycobacterium smegmatis str. MC2 155 extracellular solute-binding protein YP_887282.1 3026272 D 246196 CDS YP_887283.1 118468983 4535093 3027947..3028489 1 NC_008596.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 3028489 4535093 MSMEG_2964 Mycobacterium smegmatis str. MC2 155 adenine phosphoribosyltransferase YP_887283.1 3027947 D 246196 CDS YP_887284.1 118471771 4536380 3028533..3030926 1 NC_008596.1 identified by similarity to SP:P52560; match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; GTP pyrophosphokinase 3030926 relA 4536380 relA Mycobacterium smegmatis str. MC2 155 GTP pyrophosphokinase YP_887284.1 3028533 D 246196 CDS YP_887285.1 118469078 4537633 complement(3030981..3032378) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family protein transporter 3032378 4537633 MSMEG_2966 Mycobacterium smegmatis str. MC2 155 major facilitator family protein transporter YP_887285.1 3030981 R 246196 CDS YP_887286.1 118467599 4531415 complement(3032378..3032989) 1 NC_008596.1 identified by similarity to GB:BAC46503.1; match to protein family HMM PF01613; hypothetical protein 3032989 4531415 MSMEG_2967 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887286.1 3032378 R 246196 CDS YP_887287.1 118472835 4537060 3033121..3033750 1 NC_008596.1 hypothetical protein 3033750 4537060 MSMEG_2968 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887287.1 3033121 D 246196 CDS YP_887288.1 118471340 4533224 3033747..3034880 1 NC_008596.1 identified by match to protein family HMM PF00724; NADH:flavin oxidoreductase 3034880 4533224 MSMEG_2969 Mycobacterium smegmatis str. MC2 155 NADH:flavin oxidoreductase YP_887288.1 3033747 D 246196 CDS YP_887289.1 118469586 4531460 3034877..3035743 1 NC_008596.1 identified by match to protein family HMM PF01522; polysaccharide deacetylase 3035743 4531460 MSMEG_2970 Mycobacterium smegmatis str. MC2 155 polysaccharide deacetylase YP_887289.1 3034877 D 246196 CDS YP_887290.1 118474037 4531718 complement(3035748..3037301) 1 NC_008596.1 regulatory protein 3037301 4531718 MSMEG_2971 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_887290.1 3035748 R 246196 CDS YP_887291.1 118472142 4532479 3037408..3038829 1 NC_008596.1 identified by match to protein family HMM PF02133; permease, cytosine/purines, uracil, thiamine, allantoin family protein 3038829 4532479 MSMEG_2972 Mycobacterium smegmatis str. MC2 155 permease, cytosine/purines, uracil, thiamine, allantoin family protein YP_887291.1 3037408 D 246196 CDS YP_887292.1 118469332 4535922 complement(3038835..3039791) 1 NC_008596.1 identified by match to protein family HMM PF00160; peptidyl-prolyl cis-trans isomerase 3039791 4535922 MSMEG_2973 Mycobacterium smegmatis str. MC2 155 peptidyl-prolyl cis-trans isomerase YP_887292.1 3038835 R 246196 CDS YP_887293.1 118468823 4534079 complement(3039885..3040748) 1 NC_008596.1 identified by match to protein family HMM PF00160; cyclophilin type peptidyl-prolyl cis-trans isomerase 3040748 4534079 MSMEG_2974 Mycobacterium smegmatis str. MC2 155 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_887293.1 3039885 R 246196 CDS YP_887294.1 118467370 4534055 3040917..3041594 1 NC_008596.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase 3041594 4534055 MSMEG_2975 Mycobacterium smegmatis str. MC2 155 metallo-beta-lactamase YP_887294.1 3040917 D 246196 CDS YP_887295.1 118473178 4532580 3041591..3042871 1 NC_008596.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 3042871 hisS 4532580 hisS Mycobacterium smegmatis str. MC2 155 histidyl-tRNA synthetase YP_887295.1 3041591 D 246196 CDS YP_887296.1 118468226 4537041 3042909..3043118 1 NC_008596.1 hypothetical protein 3043118 4537041 MSMEG_2977 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887296.1 3042909 D 246196 CDS YP_887297.1 118470669 4534678 complement(3043394..3044086) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3044086 4534678 MSMEG_2978 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_887297.1 3043394 R 246196 CDS YP_887298.1 118471016 4534472 complement(3044086..3044898) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3044898 4534472 MSMEG_2979 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_887298.1 3044086 R 246196 CDS YP_887299.1 118471578 4534440 complement(3044895..3046022) 1 NC_008596.1 identified by match to protein family HMM PF02653; hypothetical protein 3046022 4534440 MSMEG_2980 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887299.1 3044895 R 246196 CDS YP_887300.1 118473797 4531276 complement(3046019..3046903) 1 NC_008596.1 identified by match to protein family HMM PF02653; branched-chain amino acid ABC transporter permease 3046903 4531276 MSMEG_2981 Mycobacterium smegmatis str. MC2 155 branched-chain amino acid ABC transporter permease YP_887300.1 3046019 R 246196 CDS YP_887301.1 118473447 4534138 complement(3046939..3048207) 1 NC_008596.1 identified by match to protein family HMM PF01094; periplasmic binding protein 3048207 4534138 MSMEG_2982 Mycobacterium smegmatis str. MC2 155 periplasmic binding protein YP_887301.1 3046939 R 246196 CDS YP_887302.1 118469000 4536050 3048445..3048876 1 NC_008596.1 hypothetical protein 3048876 4536050 MSMEG_2983 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887302.1 3048445 D 246196 CDS YP_887303.1 118468516 4535497 complement(3049055..3049870) 1 NC_008596.1 identified by match to protein family HMM PF00561; hydrolase 3049870 4535497 MSMEG_2984 Mycobacterium smegmatis str. MC2 155 hydrolase YP_887303.1 3049055 R 246196 CDS YP_887304.1 118470032 4531647 complement(3049867..3051504) 1 NC_008596.1 identified by match to protein family HMM PF05681; match to protein family HMM PF05683; match to protein family HMM TIGR00722; match to protein family HMM TIGR00723; fumarate hydratase class I, anaerobic 3051504 4531647 MSMEG_2985 Mycobacterium smegmatis str. MC2 155 fumarate hydratase class I, anaerobic YP_887304.1 3049867 R 246196 CDS YP_887305.1 118470455 4534518 complement(3051501..3052844) 1 NC_008596.1 identified by match to protein family HMM PF01425; amidohydrolase 3052844 4534518 MSMEG_2986 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_887305.1 3051501 R 246196 CDS YP_887306.1 118471653 4536490 complement(3053983..3054882) 1 NC_008596.1 identified by match to protein family HMM PF00795; carbon-nitrogen hydrolase 3054882 4536490 MSMEG_2988 Mycobacterium smegmatis str. MC2 155 carbon-nitrogen hydrolase YP_887306.1 3053983 R 246196 CDS YP_887307.1 118469473 4535736 3055061..3056095 1 NC_008596.1 identified by match to protein family HMM PF00532; LacI family transcriptional regulator 3056095 4535736 MSMEG_2989 Mycobacterium smegmatis str. MC2 155 LacI family transcriptional regulator YP_887307.1 3055061 D 246196 CDS YP_887308.1 118468989 4535099 3056145..3057179 1 NC_008596.1 identified by match to protein family HMM PF04055; Fe-S protein, radical SAM family protein 3057179 4535099 MSMEG_2990 Mycobacterium smegmatis str. MC2 155 Fe-S protein, radical SAM family protein YP_887308.1 3056145 D 246196 CDS YP_887309.1 118470660 4534669 3057281..3058564 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00710; permease of the major facilitator superfamily protein 3058564 4534669 MSMEG_2991 Mycobacterium smegmatis str. MC2 155 permease of the major facilitator superfamily protein YP_887309.1 3057281 D 246196 CDS YP_887310.1 118471411 4534887 complement(3058595..3059857) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 3059857 4534887 MSMEG_2992 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_887310.1 3058595 R 246196 CDS YP_887311.1 118472916 4533785 complement(3059854..3060993) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02771; acyl-CoA dehydrogenase 3060993 4533785 MSMEG_2993 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_887311.1 3059854 R 246196 CDS YP_887312.1 118468285 4535772 complement(3061057..3062286) 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 3062286 4535772 MSMEG_2994 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_887312.1 3061057 R 246196 CDS YP_887313.1 118471866 4536281 complement(3062374..3063033) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3063033 4536281 MSMEG_2995 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_887313.1 3062374 R 246196 CDS YP_887314.1 118473267 4537697 3063126..3063980 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 3063980 4537697 MSMEG_2996 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887314.1 3063126 D 246196 CDS YP_887315.1 118468370 4532919 3063977..3064876 1 NC_008596.1 hypothetical protein 3064876 4532919 MSMEG_2997 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887315.1 3063977 D 246196 CDS YP_887316.1 118470299 4533357 complement(3064877..3065413) 1 NC_008596.1 hypothetical protein 3065413 4533357 MSMEG_2998 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887316.1 3064877 R 246196 CDS YP_887317.1 118469053 4536867 complement(3065438..3067063) 1 NC_008596.1 identified by match to protein family HMM PF05960; hypothetical protein 3067063 4536867 MSMEG_2999 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887317.1 3065438 R 246196 CDS YP_887318.1 118470877 4536809 complement(3067056..3067949) 1 NC_008596.1 identified by match to protein family HMM PF04228; metallopeptidase, zinc binding 3067949 4536809 MSMEG_3000 Mycobacterium smegmatis str. MC2 155 metallopeptidase, zinc binding YP_887318.1 3067056 R 246196 CDS YP_887319.1 118471636 4536511 3068022..3069497 1 NC_008596.1 identified by match to protein family HMM PF00135; para-nitrobenzyl esterase 3069497 4536511 MSMEG_3002 Mycobacterium smegmatis str. MC2 155 para-nitrobenzyl esterase YP_887319.1 3068022 D 246196 CDS YP_887320.1 118474041 4531722 complement(3069494..3070009) 1 NC_008596.1 hypothetical protein 3070009 4531722 MSMEG_3001 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887320.1 3069494 R 246196 CDS YP_887321.1 118471914 4536215 3070138..3071934 1 NC_008596.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 3071934 aspS 4536215 aspS Mycobacterium smegmatis str. MC2 155 aspartyl-tRNA synthetase YP_887321.1 3070138 D 246196 CDS YP_887322.1 118471984 4536131 3071978..3072433 1 NC_008596.1 identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 3072433 4536131 MSMEG_3004 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887322.1 3071978 D 246196 CDS YP_887323.1 118470023 4531638 complement(3072435..3073382) 1 NC_008596.1 Converts (S)-3-hydroxyactk-CoA to 3-oxoayl-CoA; 3-hydroxyacyl-CoA dehydrogenase 3073382 4531638 MSMEG_3005 Mycobacterium smegmatis str. MC2 155 3-hydroxyacyl-CoA dehydrogenase YP_887323.1 3072435 R 246196 CDS YP_887324.1 118467708 4537715 complement(3073373..3074650) 1 NC_008596.1 identified by match to protein family HMM PF00465; Fe-dependent alcohol dehydrogenase 3074650 4537715 MSMEG_3006 Mycobacterium smegmatis str. MC2 155 Fe-dependent alcohol dehydrogenase YP_887324.1 3073373 R 246196 CDS YP_887325.1 118469613 4531585 complement(3074647..3076152) 1 NC_008596.1 identified by match to protein family HMM PF00171; succinate-semialdehyde dehydrogenase 3076152 4531585 MSMEG_3007 Mycobacterium smegmatis str. MC2 155 succinate-semialdehyde dehydrogenase YP_887325.1 3074647 R 246196 CDS YP_887326.1 118468899 4536692 3076326..3078044 1 NC_008596.1 identified by match to protein family HMM PF01590; match to protein family HMM PF02954; sigma 54 type regulator 3078044 4536692 MSMEG_3008 Mycobacterium smegmatis str. MC2 155 sigma 54 type regulator YP_887326.1 3076326 D 246196 CDS YP_887327.1 118469557 4537503 complement(3078062..3078793) 1 NC_008596.1 identified by match to protein family HMM PF00106; 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase 3078793 4537503 MSMEG_3009 Mycobacterium smegmatis str. MC2 155 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase YP_887327.1 3078062 R 246196 CDS YP_887328.1 118471428 4532811 3078871..3079857 1 NC_008596.1 identified by match to protein family HMM PF07859; acetyl-hydrolase 3079857 4532811 MSMEG_3010 Mycobacterium smegmatis str. MC2 155 acetyl-hydrolase YP_887328.1 3078871 D 246196 CDS YP_887329.1 118468705 4534695 3079874..3081520 1 NC_008596.1 identified by match to protein family HMM PF01266; steroid monooxygenase 3081520 4534695 MSMEG_3011 Mycobacterium smegmatis str. MC2 155 steroid monooxygenase YP_887329.1 3079874 D 246196 CDS YP_887330.1 118470862 4536794 complement(3081596..3082780) 1 NC_008596.1 identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; acetyl-CoA acetyltransferase 3082780 4536794 MSMEG_3012 Mycobacterium smegmatis str. MC2 155 acetyl-CoA acetyltransferase YP_887330.1 3081596 R 246196 CDS YP_887331.1 118471617 4536530 3082878..3083348 1 NC_008596.1 identified by match to protein family HMM PF01638; transcriptional regulator family protein 3083348 4536530 MSMEG_3013 Mycobacterium smegmatis str. MC2 155 transcriptional regulator family protein YP_887331.1 3082878 D 246196 CDS YP_887332.1 118473391 4537009 complement(3083458..3083838) 1 NC_008596.1 identified by match to protein family HMM PF04944; hypothetical protein 3083838 4537009 MSMEG_3014 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887332.1 3083458 R 246196 CDS YP_887333.1 118469152 4534738 complement(3083882..3084628) 1 NC_008596.1 hypothetical protein 3084628 4534738 MSMEG_3015 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887333.1 3083882 R 246196 CDS YP_887334.1 118472186 4533724 3084783..3088091 1 NC_008596.1 identified by match to protein family HMM PF01841; hypothetical protein 3088091 4533724 MSMEG_3016 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887334.1 3084783 D 246196 CDS YP_887335.1 118473643 4533511 3088091..3090805 1 NC_008596.1 identified by match to protein family HMM PF04168; match to protein family HMM PF04169; match to protein family HMM PF04174; hypothetical protein 3090805 4533511 MSMEG_3017 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887335.1 3088091 D 246196 CDS YP_887336.1 118468990 4535100 3090802..3091722 1 NC_008596.1 identified by match to protein family HMM PF01841; transglutaminase domain-containing protein 3091722 4535100 MSMEG_3018 Mycobacterium smegmatis str. MC2 155 transglutaminase domain-containing protein YP_887336.1 3090802 D 246196 CDS YP_887337.1 118469518 4536722 3091715..3092743 1 NC_008596.1 hypothetical protein 3092743 4536722 MSMEG_3019 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887337.1 3091715 D 246196 CDS YP_887338.1 118471270 4532144 3092925..3093758 1 NC_008596.1 hypothetical protein 3093758 4532144 MSMEG_3020 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887338.1 3092925 D 246196 CDS YP_887339.1 118473523 4533623 3093797..3095140 1 NC_008596.1 identified by match to protein family HMM PF00004; match to protein family HMM PF01078; match to protein family HMM PF07728; recombination factor protein RarA 3095140 4533623 MSMEG_3021 Mycobacterium smegmatis str. MC2 155 recombination factor protein RarA YP_887339.1 3093797 D 246196 CDS YP_887340.1 118468891 4536684 complement(3095235..3095540) 1 NC_008596.1 transglycosylase associated protein 3095540 4536684 MSMEG_3022 Mycobacterium smegmatis str. MC2 155 transglycosylase associated protein YP_887340.1 3095235 R 246196 CDS YP_887341.1 118470365 4534640 3096393..3096782 1 NC_008596.1 identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149; hypothetical protein 3096782 4534640 MSMEG_3024 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887341.1 3096393 D 246196 CDS YP_887342.1 118469604 4531109 3096983..3099673 1 NC_008596.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 3099673 alaS 4531109 alaS Mycobacterium smegmatis str. MC2 155 alanyl-tRNA synthetase YP_887342.1 3096983 D 246196 CDS YP_887343.1 118470819 4531930 3099680..3100192 1 NC_008596.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 3100192 4531930 MSMEG_3026 Mycobacterium smegmatis str. MC2 155 Holliday junction resolvase-like protein YP_887343.1 3099680 D 246196 CDS YP_887344.1 118471154 4530944 3100185..3101429 1 NC_008596.1 identified by match to protein family HMM PF02618; hypothetical protein 3101429 4530944 MSMEG_3027 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887344.1 3100185 D 246196 CDS YP_887345.1 118473062 4534614 3101419..3102249 1 NC_008596.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 3102249 aroE 4534614 aroE Mycobacterium smegmatis str. MC2 155 shikimate 5-dehydrogenase YP_887345.1 3101419 D 246196 CDS YP_887346.1 118469306 4533371 3102259..3102702 1 NC_008596.1 identified by match to protein family HMM PF01478; peptidase, A24 (type IV prepilin peptidase) family protein 3102702 4533371 MSMEG_3029 Mycobacterium smegmatis str. MC2 155 peptidase, A24 (type IV prepilin peptidase) family protein YP_887346.1 3102259 D 246196 CDS YP_887347.1 118470307 4533365 3102792..3103991 1 NC_008596.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 3103991 aroC 4533365 aroC Mycobacterium smegmatis str. MC2 155 chorismate synthase YP_887347.1 3102792 D 246196 CDS YP_887348.1 118471061 4537134 3103991..3104725 1 NC_008596.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 3104725 aroK 4537134 aroK Mycobacterium smegmatis str. MC2 155 shikimate kinase YP_887348.1 3103991 D 246196 CDS YP_887349.1 118469903 4533222 3104730..3105851 1 NC_008596.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 3105851 aroB 4533222 aroB Mycobacterium smegmatis str. MC2 155 3-dehydroquinate synthase YP_887349.1 3104730 D 246196 CDS YP_887350.1 118471998 4536145 complement(3105842..3106417) 1 NC_008596.1 hypothetical protein 3106417 4536145 MSMEG_3032 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887350.1 3105842 R 246196 CDS YP_887351.1 118473871 4531119 3106451..3107587 1 NC_008596.1 identified by match to protein family HMM PF00557; metallopeptidase, M24 family protein 3107587 4531119 MSMEG_3034 Mycobacterium smegmatis str. MC2 155 metallopeptidase, M24 family protein YP_887351.1 3106451 D 246196 CDS YP_887352.1 118473166 4532568 3107613..3108176 1 NC_008596.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 3108176 efp 4532568 efp Mycobacterium smegmatis str. MC2 155 elongation factor P YP_887352.1 3107613 D 246196 CDS YP_887353.1 118470676 4531739 3108169..3108651 1 NC_008596.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 3108651 nusB 4531739 nusB Mycobacterium smegmatis str. MC2 155 transcription antitermination protein NusB YP_887353.1 3108169 D 246196 CDS YP_887354.1 118474034 4533447 3111537..3111776 1 NC_008596.1 hypothetical protein 3111776 4533447 MSMEG_3038 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887354.1 3111537 D 246196 CDS YP_887355.1 118471157 4530947 complement(3111781..3112989) 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01494; monooxygenase 3112989 4530947 MSMEG_3039 Mycobacterium smegmatis str. MC2 155 monooxygenase YP_887355.1 3111781 R 246196 CDS YP_887356.1 118471066 4537139 complement(3113057..3114259) 1 NC_008596.1 identified by match to protein family HMM PF00144; beta-lactamase 3114259 4537139 MSMEG_3040 Mycobacterium smegmatis str. MC2 155 beta-lactamase YP_887356.1 3113057 R 246196 CDS YP_887357.1 118472427 4532044 complement(3114301..3114978) 1 NC_008596.1 identified by match to protein family HMM PF03848; match to protein family HMM PF05724; thiopurine S-methyltransferase (tpmt) superfamily protein 3114978 4532044 MSMEG_3041 Mycobacterium smegmatis str. MC2 155 thiopurine S-methyltransferase (tpmt) superfamily protein YP_887357.1 3114301 R 246196 CDS YP_887358.1 118473305 4535176 3115075..3115632 1 NC_008596.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 3115632 4535176 MSMEG_3042 Mycobacterium smegmatis str. MC2 155 bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase YP_887358.1 3115075 D 246196 CDS YP_887359.1 118472601 4536879 3115629..3116585 1 NC_008596.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 3116585 pyrB 4536879 pyrB Mycobacterium smegmatis str. MC2 155 aspartate carbamoyltransferase YP_887359.1 3115629 D 246196 CDS YP_887360.1 118473601 4531036 3116582..3117916 1 NC_008596.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 3117916 pyrC 4531036 pyrC Mycobacterium smegmatis str. MC2 155 dihydroorotase YP_887360.1 3116582 D 246196 CDS YP_887361.1 118470888 4537193 3117913..3118413 1 NC_008596.1 integral membrane protein 3118413 4537193 MSMEG_3045 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_887361.1 3117913 D 246196 CDS YP_887362.1 118473498 4532131 3118410..3119558 1 NC_008596.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 3119558 carA 4532131 carA Mycobacterium smegmatis str. MC2 155 carbamoyl phosphate synthase small subunit YP_887362.1 3118410 D 246196 CDS YP_887363.1 118469528 4536732 3119664..3123011 1 NC_008596.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 3123011 carB 4536732 carB Mycobacterium smegmatis str. MC2 155 carbamoyl phosphate synthase large subunit YP_887363.1 3119664 D 246196 CDS YP_887364.1 118470834 4532520 3123008..3123838 1 NC_008596.1 type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 3123838 pyrF 4532520 pyrF Mycobacterium smegmatis str. MC2 155 orotidine 5'-phosphate decarboxylase YP_887364.1 3123008 D 246196 CDS YP_887365.1 118469026 4530878 complement(3124455..3124661) 1 NC_008596.1 hypothetical protein 3124661 4530878 MSMEG_3049 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887365.1 3124455 R 246196 CDS YP_887366.1 118473958 4533904 3124973..3125290 1 NC_008596.1 integration host factor 3125290 4533904 MSMEG_3050 Mycobacterium smegmatis str. MC2 155 integration host factor YP_887366.1 3124973 D 246196 CDS YP_887367.1 118468740 4534268 3125301..3125903 1 NC_008596.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 3125903 gmk 4534268 gmk Mycobacterium smegmatis str. MC2 155 guanylate kinase YP_887367.1 3125301 D 246196 CDS YP_887368.1 118473044 4533197 complement(3125908..3126033) 1 NC_008596.1 hypothetical protein 3126033 4533197 MSMEG_3052 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887368.1 3125908 R 246196 CDS YP_887369.1 118467362 4534047 3126019..3126342 1 NC_008596.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and subunit alphas; DNA-directed RNA polymerase subunit omega 3126342 rpoZ 4534047 rpoZ Mycobacterium smegmatis str. MC2 155 DNA-directed RNA polymerase subunit omega YP_887369.1 3126019 D 246196 CDS YP_887370.1 118473275 4537705 3126361..3127605 1 NC_008596.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 3127605 coaBC 4537705 coaBC Mycobacterium smegmatis str. MC2 155 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_887370.1 3126361 D 246196 CDS YP_887371.1 118468007 4533088 3127746..3128945 1 NC_008596.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 3128945 metK 4533088 metK Mycobacterium smegmatis str. MC2 155 S-adenosylmethionine synthetase YP_887371.1 3127746 D 246196 CDS YP_887372.1 118470779 4531143 3129093..3130088 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3130088 4531143 MSMEG_3056 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_887372.1 3129093 D 246196 CDS YP_887373.1 118471767 4536376 3130085..3130825 1 NC_008596.1 identified by match to protein family HMM PF00528; metal ABC transporter permease 3130825 4536376 MSMEG_3057 Mycobacterium smegmatis str. MC2 155 metal ABC transporter permease YP_887373.1 3130085 D 246196 CDS YP_887374.1 118473119 4531846 3130870..3131709 1 NC_008596.1 identified by match to protein family HMM PF03180; lipoprotein, nlpa family protein 3131709 4531846 MSMEG_3058 Mycobacterium smegmatis str. MC2 155 lipoprotein, nlpa family protein YP_887374.1 3130870 D 246196 CDS YP_887375.1 118470172 4534350 complement(3131786..3132673) 1 NC_008596.1 identified by match to protein family HMM PF07859; esterase 3132673 4534350 MSMEG_3059 Mycobacterium smegmatis str. MC2 155 esterase YP_887375.1 3131786 R 246196 CDS YP_887376.1 118468080 4533027 3132768..3133439 1 NC_008596.1 identified by match to protein family HMM PF07947; hypothetical protein 3133439 4533027 MSMEG_3060 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887376.1 3132768 D 246196 CDS YP_887377.1 118473637 4533505 3133436..3135436 1 NC_008596.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 3135436 priA 4533505 priA Mycobacterium smegmatis str. MC2 155 primosome assembly protein PriA YP_887377.1 3133436 D 246196 CDS YP_887378.1 118470875 4536807 3135497..3137305 1 NC_008596.1 hypothetical protein 3137305 4536807 MSMEG_3062 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887378.1 3135497 D 246196 CDS YP_887379.1 118470242 4536761 3137299..3137835 1 NC_008596.1 identified by match to protein family HMM PF04011; LemA protein 3137835 4536761 MSMEG_3063 Mycobacterium smegmatis str. MC2 155 LemA protein YP_887379.1 3137299 D 246196 CDS YP_887380.1 118468625 4535023 3137866..3138804 1 NC_008596.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 3138804 fmt 4535023 fmt Mycobacterium smegmatis str. MC2 155 methionyl-tRNA formyltransferase YP_887380.1 3137866 D 246196 CDS YP_887381.1 118469121 4535334 3138801..3140195 1 NC_008596.1 identified by match to protein family HMM PF01029; match to protein family HMM PF01189; ribosomal RNA small subunit methyltransferase B 3140195 sun 4535334 sun Mycobacterium smegmatis str. MC2 155 ribosomal RNA small subunit methyltransferase B YP_887381.1 3138801 D 246196 CDS YP_887382.1 118468662 4535238 3140241..3140918 1 NC_008596.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 3140918 rpe 4535238 rpe Mycobacterium smegmatis str. MC2 155 ribulose-phosphate 3-epimerase YP_887382.1 3140241 D 246196 CDS YP_887383.1 118473539 4533639 3140915..3141922 1 NC_008596.1 identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD 3141922 ribD 4533639 ribD Mycobacterium smegmatis str. MC2 155 riboflavin biosynthesis protein RibD YP_887383.1 3140915 D 246196 CDS YP_887384.1 118473785 4535143 3142059..3142244 1 NC_008596.1 hypothetical protein 3142244 4535143 MSMEG_3068 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887384.1 3142059 D 246196 CDS YP_887385.1 118470910 4537584 complement(3142257..3143939) 1 NC_008596.1 identified by match to protein family HMM PF07690; aminoglycosides/tetracycline-transport integral membrane protein 3143939 4537584 MSMEG_3069 Mycobacterium smegmatis str. MC2 155 aminoglycosides/tetracycline-transport integral membrane protein YP_887385.1 3142257 R 246196 CDS YP_887386.1 118468811 4534067 complement(3143957..3144667) 1 NC_008596.1 identified by match to protein family HMM PF07161; LprG protein 3144667 4534067 MSMEG_3070 Mycobacterium smegmatis str. MC2 155 LprG protein YP_887386.1 3143957 R 246196 CDS YP_887387.1 118467379 4533850 3144739..3145338 1 NC_008596.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 3145338 ribE 4533850 ribE Mycobacterium smegmatis str. MC2 155 riboflavin synthase subunit alpha YP_887387.1 3144739 D 246196 CDS YP_887388.1 118470936 4533671 3145459..3146778 1 NC_008596.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 3146778 4533671 MSMEG_3072 Mycobacterium smegmatis str. MC2 155 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein YP_887388.1 3145459 D 246196 CDS YP_887389.1 118470415 4534188 3146775..3147251 1 NC_008596.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; subunit beta of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 3147251 ribH 4534188 ribH Mycobacterium smegmatis str. MC2 155 6,7-dimethyl-8-ribityllumazine synthase YP_887389.1 3146775 D 246196 CDS YP_887390.1 118468856 4535629 3147248..3147721 1 NC_008596.1 hypothetical protein 3147721 4535629 MSMEG_3074 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887390.1 3147248 D 246196 CDS YP_887391.1 118471094 4535859 complement(3147737..3148219) 1 NC_008596.1 identified by similarity to GB:AAK38651.1; match to protein family HMM PF00583; GNAT family acetyltransferase 3148219 4535859 MSMEG_3075 Mycobacterium smegmatis str. MC2 155 GNAT family acetyltransferase YP_887391.1 3147737 R 246196 CDS YP_887392.1 118473561 4530995 complement(3148216..3150126) 1 NC_008596.1 identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066; gamma-glutamyltransferase 3150126 ggt 4530995 ggt Mycobacterium smegmatis str. MC2 155 gamma-glutamyltransferase YP_887392.1 3148216 R 246196 CDS YP_887393.1 118471317 4534657 complement(3150120..3150308) 1 NC_008596.1 hypothetical protein 3150308 4534657 MSMEG_3077 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887393.1 3150120 R 246196 CDS YP_887394.1 118472646 4537665 3150228..3152348 1 NC_008596.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 3152348 uvrC 4537665 uvrC Mycobacterium smegmatis str. MC2 155 excinuclease ABC subunit C YP_887394.1 3150228 D 246196 CDS YP_887395.1 118470722 4533937 3152446..3153321 1 NC_008596.1 identified by match to protein family HMM PF03668; hypothetical protein 3153321 4533937 MSMEG_3079 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887395.1 3152446 D 246196 CDS YP_887396.1 118470668 4534677 3153318..3154382 1 NC_008596.1 identified by match to protein family HMM PF01933; match to protein family HMM TIGR01826; hypothetical protein 3154382 4534677 MSMEG_3080 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887396.1 3153318 D 246196 CDS YP_887397.1 118469694 4536827 3154391..3155356 1 NC_008596.1 identified by match to protein family HMM PF02650; match to protein family HMM TIGR00647; hypothetical protein 3155356 4536827 MSMEG_3081 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887397.1 3154391 D 246196 CDS YP_887398.1 118474023 4533436 3155445..3155837 1 NC_008596.1 SOUL heme-binding protein 3155837 4533436 MSMEG_3082 Mycobacterium smegmatis str. MC2 155 SOUL heme-binding protein YP_887398.1 3155445 D 246196 CDS YP_887399.1 118473555 4532426 3155827..3157173 1 NC_008596.1 identified by match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01777; nucleoside-diphosphate sugar epimerase 3157173 4532426 MSMEG_3083 Mycobacterium smegmatis str. MC2 155 nucleoside-diphosphate sugar epimerase YP_887399.1 3155827 D 246196 CDS YP_887400.1 118467799 4535975 3157277..3158299 1 NC_008596.1 identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase 3158299 gap 4535975 gap Mycobacterium smegmatis str. MC2 155 glyceraldehyde-3-phosphate dehydrogenase YP_887400.1 3157277 D 246196 CDS YP_887401.1 118469699 4537204 3158305..3159531 1 NC_008596.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 3159531 pgk 4537204 pgk Mycobacterium smegmatis str. MC2 155 phosphoglycerate kinase YP_887401.1 3158305 D 246196 CDS YP_887402.1 118471699 4536422 3159535..3160320 1 NC_008596.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 3160320 tpiA 4536422 tpiA Mycobacterium smegmatis str. MC2 155 triosephosphate isomerase YP_887402.1 3159535 D 246196 CDS YP_887403.1 118473534 4533634 3160365..3160601 1 NC_008596.1 identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG 3160601 secG 4533634 secG Mycobacterium smegmatis str. MC2 155 preprotein translocase subunit SecG YP_887403.1 3160365 D 246196 CDS YP_887404.1 118473933 4537371 complement(3161830..3162525) 1 NC_008596.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 3162525 deoC 4537371 deoC Mycobacterium smegmatis str. MC2 155 deoxyribose-phosphate aldolase YP_887404.1 3161830 R 246196 CDS YP_887405.1 118472054 4535401 complement(3162550..3163551) 1 NC_008596.1 identified by match to protein family HMM PF02653; ribose transporter permease RbsC 3163551 4535401 MSMEG_3090 Mycobacterium smegmatis str. MC2 155 ribose transporter permease RbsC YP_887405.1 3162550 R 246196 CDS YP_887406.1 118473181 4532583 complement(3163544..3165091) 1 NC_008596.1 identified by match to protein family HMM PF00005; ribose transport ATP-binding protein RbsA 3165091 4532583 MSMEG_3091 Mycobacterium smegmatis str. MC2 155 ribose transport ATP-binding protein RbsA YP_887406.1 3163544 R 246196 CDS YP_887407.1 118469003 4536053 complement(3165093..3166037) 1 NC_008596.1 identified by match to protein family HMM PF04198; transcriptional regulator, sugar-binding family protein 3166037 4536053 MSMEG_3092 Mycobacterium smegmatis str. MC2 155 transcriptional regulator, sugar-binding family protein YP_887407.1 3165093 R 246196 CDS YP_887408.1 118472234 4532455 complement(3166037..3167596) 1 NC_008596.1 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; sugar kinase 3167596 4532455 MSMEG_3093 Mycobacterium smegmatis str. MC2 155 sugar kinase YP_887408.1 3166037 R 246196 CDS YP_887409.1 118471703 4536427 complement(3167600..3168691) 1 NC_008596.1 identified by match to protein family HMM PF00107; oxidoreductase, zinc-binding dehydrogenase 3168691 4536427 MSMEG_3094 Mycobacterium smegmatis str. MC2 155 oxidoreductase, zinc-binding dehydrogenase YP_887409.1 3167600 R 246196 CDS YP_887410.1 118473636 4531032 3168630..3168773 1 NC_008596.1 hypothetical protein 3168773 4531032 MSMEG_3096 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887410.1 3168630 D 246196 CDS YP_887411.1 118468450 4536898 complement(3168749..3169684) 1 NC_008596.1 identified by match to protein family HMM PF00532; D-ribose-binding periplasmic protein 3169684 4536898 MSMEG_3095 Mycobacterium smegmatis str. MC2 155 D-ribose-binding periplasmic protein YP_887411.1 3168749 R 246196 CDS YP_887412.1 118467879 4535253 3169942..3172743 1 NC_008596.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 3172743 ppc 4535253 ppc Mycobacterium smegmatis str. MC2 155 phosphoenolpyruvate carboxylase YP_887412.1 3169942 D 246196 CDS YP_887413.1 118469405 4531958 complement(3172746..3173117) 1 NC_008596.1 hypothetical protein 3173117 4531958 MSMEG_3098 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887413.1 3172746 R 246196 CDS YP_887414.1 118470981 4531901 complement(3173171..3173905) 1 NC_008596.1 identified by match to protein family HMM PF01182; match to protein family HMM TIGR01198; 6-phosphogluconolactonase 3173905 pgl 4531901 pgl Mycobacterium smegmatis str. MC2 155 6-phosphogluconolactonase YP_887414.1 3173171 R 246196 CDS YP_887415.1 118468307 4533065 complement(3173902..3174813) 1 NC_008596.1 identified by match to protein family HMM TIGR00534; OpcA protein 3174813 opcA 4533065 opcA Mycobacterium smegmatis str. MC2 155 OpcA protein YP_887415.1 3173902 R 246196 CDS YP_887416.1 118467447 4535456 complement(3174830..3176380) 1 NC_008596.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 3176380 zwf 4535456 zwf Mycobacterium smegmatis str. MC2 155 glucose-6-phosphate 1-dehydrogenase YP_887416.1 3174830 R 246196 CDS YP_887417.1 118470200 4532494 complement(3176377..3177492) 1 NC_008596.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; transaldolase 3177492 tal 4532494 tal Mycobacterium smegmatis str. MC2 155 transaldolase YP_887417.1 3176377 R 246196 CDS YP_887418.1 118473102 4531163 complement(3177527..3179617) 1 NC_008596.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 3179617 tkt 4531163 tkt Mycobacterium smegmatis str. MC2 155 transketolase YP_887418.1 3177527 R 246196 CDS YP_887419.1 118471593 4536544 3179681..3179839 1 NC_008596.1 hypothetical protein 3179839 4536544 MSMEG_3104 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887419.1 3179681 D 246196 CDS YP_887420.1 118471528 4537239 3179862..3180788 1 NC_008596.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 3180788 cyoE 4537239 cyoE Mycobacterium smegmatis str. MC2 155 protoheme IX farnesyltransferase YP_887420.1 3179862 D 246196 CDS YP_887421.1 118468194 4534408 complement(3180841..3181869) 1 NC_008596.1 identified by match to protein family HMM PF00107; quinone oxidoreductase 3181869 4534408 MSMEG_3106 Mycobacterium smegmatis str. MC2 155 quinone oxidoreductase YP_887421.1 3180841 R 246196 CDS YP_887422.1 118472733 4532362 3181861..3182799 1 NC_008596.1 hypothetical protein 3182799 4532362 MSMEG_3107 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887422.1 3181861 D 246196 CDS YP_887423.1 118473725 4536959 complement(3182812..3183879) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATPase 3183879 4536959 MSMEG_3108 Mycobacterium smegmatis str. MC2 155 ABC transporter ATPase YP_887423.1 3182812 R 246196 CDS YP_887424.1 118472355 4531606 complement(3183900..3184715) 1 NC_008596.1 identified by match to protein family HMM PF00528; binding-protein-dependent transporters inner membrane component 3184715 4531606 MSMEG_3109 Mycobacterium smegmatis str. MC2 155 binding-protein-dependent transporters inner membrane component YP_887424.1 3183900 R 246196 CDS YP_887425.1 118468003 4531323 complement(3184712..3185575) 1 NC_008596.1 identified by match to protein family HMM PF00528; binding-protein-dependent transporters inner membrane component 3185575 4531323 MSMEG_3110 Mycobacterium smegmatis str. MC2 155 binding-protein-dependent transporters inner membrane component YP_887425.1 3184712 R 246196 CDS YP_887426.1 118469572 4531446 complement(3185616..3186944) 1 NC_008596.1 identified by match to protein family HMM PF01547; extracellular solute-binding protein 3186944 4531446 MSMEG_3111 Mycobacterium smegmatis str. MC2 155 extracellular solute-binding protein YP_887426.1 3185616 R 246196 CDS YP_887427.1 118468099 4536028 complement(3187000..3187794) 1 NC_008596.1 identified by match to protein family HMM PF00106; estradiol 17-beta-dehydrogenase 8 3187794 4536028 MSMEG_3112 Mycobacterium smegmatis str. MC2 155 estradiol 17-beta-dehydrogenase 8 YP_887427.1 3187000 R 246196 CDS YP_887428.1 118473281 4535543 complement(3187791..3189278) 1 NC_008596.1 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; carbohydrate kinase 3189278 4535543 MSMEG_3113 Mycobacterium smegmatis str. MC2 155 carbohydrate kinase YP_887428.1 3187791 R 246196 CDS YP_887429.1 118471858 4536273 3189456..3190271 1 NC_008596.1 identified by match to protein family HMM PF03437; match to protein family HMM TIGR00259; hypothetical protein 3190271 4536273 MSMEG_3114 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887429.1 3189456 D 246196 CDS YP_887430.1 118467720 4534003 3190268..3191017 1 NC_008596.1 identified by match to protein family HMM PF00459; inositol-1-monophosphatase 3191017 4534003 MSMEG_3116 Mycobacterium smegmatis str. MC2 155 inositol-1-monophosphatase YP_887430.1 3190268 D 246196 CDS YP_887431.1 118470727 4533942 complement(3191000..3191818) 1 NC_008596.1 identified by match to protein family HMM PF00455; match to protein family HMM PF08220; regulatory protein, DeoR 3191818 4533942 MSMEG_3115 Mycobacterium smegmatis str. MC2 155 regulatory protein, DeoR YP_887431.1 3191000 R 246196 CDS YP_887432.1 118469858 4530896 complement(3191877..3192839) 1 NC_008596.1 identified by match to protein family HMM PF02628; cytochrome aa3 controlling protein 3192839 4530896 MSMEG_3117 Mycobacterium smegmatis str. MC2 155 cytochrome aa3 controlling protein YP_887432.1 3191877 R 246196 CDS YP_887433.1 118468326 4533806 complement(3192884..3193669) 1 NC_008596.1 identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025; ABC transporter 3193669 4533806 MSMEG_3118 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_887433.1 3192884 R 246196 CDS YP_887434.1 118473536 4533636 complement(3193666..3194634) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3194634 4533636 MSMEG_3119 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_887434.1 3193666 R 246196 CDS YP_887435.1 118471764 4536373 complement(3194631..3196310) 1 NC_008596.1 hypothetical protein 3196310 4536373 MSMEG_3120 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887435.1 3194631 R 246196 CDS YP_887436.1 118470796 4536080 3196382..3197227 1 NC_008596.1 identified by match to protein family HMM PF01022; DNA-binding protein 3197227 4536080 MSMEG_3121 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_887436.1 3196382 D 246196 CDS YP_887437.1 118472504 4533734 3197224..3198657 1 NC_008596.1 identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980; FeS assembly protein SufB 3198657 sufB 4533734 sufB Mycobacterium smegmatis str. MC2 155 FeS assembly protein SufB YP_887437.1 3197224 D 246196 CDS YP_887438.1 118467974 4535156 3198660..3199871 1 NC_008596.1 identified by match to protein family HMM PF01458; match to protein family HMM TIGR01981; FeS assembly protein SufD 3199871 sufD 4535156 sufD Mycobacterium smegmatis str. MC2 155 FeS assembly protein SufD YP_887438.1 3198660 D 246196 CDS YP_887439.1 118469532 4537106 3199871..3200644 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978; FeS assembly ATPase SufC 3200644 sufC 4537106 sufC Mycobacterium smegmatis str. MC2 155 FeS assembly ATPase SufC YP_887439.1 3199871 D 246196 CDS YP_887440.1 118471983 4536130 3200647..3201891 1 NC_008596.1 identified by match to protein family HMM PF00266; match to protein family HMM TIGR01979; cysteine desulfurase 3201891 4536130 MSMEG_3125 Mycobacterium smegmatis str. MC2 155 cysteine desulfurase YP_887440.1 3200647 D 246196 CDS YP_887441.1 118470835 4532521 3201888..3202382 1 NC_008596.1 identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994; SUF system FeS assembly protein, NifU family protein 3202382 4532521 MSMEG_3126 Mycobacterium smegmatis str. MC2 155 SUF system FeS assembly protein, NifU family protein YP_887441.1 3201888 D 246196 CDS YP_887442.1 118470746 4533298 3202379..3202720 1 NC_008596.1 identified by match to protein family HMM PF01883; hypothetical protein 3202720 4533298 MSMEG_3127 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887442.1 3202379 D 246196 CDS YP_887443.1 118470847 4534302 complement(3202721..3203860) 1 NC_008596.1 hypothetical protein 3203860 4534302 MSMEG_3128 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887443.1 3202721 R 246196 CDS YP_887444.1 118473440 4534131 complement(3203857..3204447) 1 NC_008596.1 identified by match to protein family HMM PF00440; HTH-type transcriptional regulator 3204447 4534131 MSMEG_3129 Mycobacterium smegmatis str. MC2 155 HTH-type transcriptional regulator YP_887444.1 3203857 R 246196 CDS YP_887445.1 118470434 4532225 complement(3204495..3204944) 1 NC_008596.1 hypothetical protein 3204944 4532225 MSMEG_3130 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887445.1 3204495 R 246196 CDS YP_887446.1 118470559 4531502 complement(3205123..3206757) 1 NC_008596.1 identified by match to protein family HMM PF00501; AMP-binding protein 3206757 4531502 MSMEG_3131 Mycobacterium smegmatis str. MC2 155 AMP-binding protein YP_887446.1 3205123 R 246196 CDS YP_887447.1 118468233 4537418 3207089..3207892 1 NC_008596.1 DNA-binding protein 3207892 4537418 MSMEG_3132 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_887447.1 3207089 D 246196 CDS YP_887448.1 118469472 4535735 3208009..3209274 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 3209274 4535735 MSMEG_3134 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_887448.1 3208009 D 246196 CDS YP_887449.1 118473790 4531268 complement(3209187..3209825) 1 NC_008596.1 hypothetical protein 3209825 4531268 MSMEG_3133 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887449.1 3209187 R 246196 CDS YP_887450.1 118471369 4535276 3209352..3209747 1 NC_008596.1 hypothetical protein 3209747 4535276 MSMEG_3135 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887450.1 3209352 D 246196 CDS YP_887451.1 118472989 4532269 3209887..3210606 1 NC_008596.1 heme peroxidase superfamily protein 3210606 4532269 MSMEG_3136 Mycobacterium smegmatis str. MC2 155 heme peroxidase superfamily protein YP_887451.1 3209887 D 246196 CDS YP_887452.1 118471503 4536842 3210665..3211774 1 NC_008596.1 identified by match to protein family HMM PF00724; oxidoreductase 3211774 4536842 MSMEG_3137 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_887452.1 3210665 D 246196 CDS YP_887453.1 118472572 4534156 3211820..3212194 1 NC_008596.1 identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 3212194 trx 4534156 trx Mycobacterium smegmatis str. MC2 155 thioredoxin YP_887453.1 3211820 D 246196 CDS YP_887454.1 118467382 4533853 3212249..3213070 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3213070 4533853 MSMEG_3139 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_887454.1 3212249 D 246196 CDS YP_887455.1 118468827 4535404 3213101..3214729 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3214729 4535404 MSMEG_3140 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_887455.1 3213101 D 246196 CDS YP_887456.1 118472368 4534758 3214859..3215056 1 NC_008596.1 hypothetical protein 3215056 4534758 MSMEG_3141 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887456.1 3214859 D 246196 CDS YP_887457.1 118467814 4534565 complement(3215094..3215708) 1 NC_008596.1 identified by match to protein family HMM PF00440; HTH-type transcriptional repressor AcnR 3215708 4534565 MSMEG_3142 Mycobacterium smegmatis str. MC2 155 HTH-type transcriptional repressor AcnR YP_887457.1 3215094 R 246196 CDS YP_887458.1 118471676 4536477 complement(3215760..3218591) 1 NC_008596.1 identified by match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR01341; aconitate hydratase 1 3218591 acnA 4536477 acnA Mycobacterium smegmatis str. MC2 155 aconitate hydratase 1 YP_887458.1 3215760 R 246196 CDS YP_887459.1 118473730 4536964 3218854..3219456 1 NC_008596.1 hypothetical protein 3219456 4536964 MSMEG_3144 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887459.1 3218854 D 246196 CDS YP_887460.1 118468127 4535215 3219661..3221154 1 NC_008596.1 identified by match to protein family HMM PF00877; secreted cell wall-associated hydrolase 3221154 4535215 MSMEG_3145 Mycobacterium smegmatis str. MC2 155 secreted cell wall-associated hydrolase YP_887460.1 3219661 D 246196 CDS YP_887461.1 118469649 4535059 3221174..3221863 1 NC_008596.1 identified by match to protein family HMM PF00877; invasin 1 3221863 4535059 MSMEG_3146 Mycobacterium smegmatis str. MC2 155 invasin 1 YP_887461.1 3221174 D 246196 CDS YP_887462.1 118469997 4533120 3222173..3223219 1 NC_008596.1 identified by match to protein family HMM PF07726; match to protein family HMM PF07728; ATPase, MoxR family protein 3223219 moxR 4533120 moxR Mycobacterium smegmatis str. MC2 155 ATPase, MoxR family protein YP_887462.1 3222173 D 246196 CDS YP_887463.1 118470346 4534929 3223216..3224163 1 NC_008596.1 hypothetical protein 3224163 4534929 MSMEG_3148 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887463.1 3223216 D 246196 CDS YP_887464.1 118468162 4535034 3224240..3225223 1 NC_008596.1 identified by match to protein family HMM PF00092; hypothetical protein 3225223 4535034 MSMEG_3149 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887464.1 3224240 D 246196 CDS YP_887465.1 118469633 4534094 3225346..3226113 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM TIGR01830; 3-oxoacyl-ACP reductase 3226113 fabG 4534094 fabG Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_887465.1 3225346 D 246196 CDS YP_887466.1 118471064 4537137 3226161..3226970 1 NC_008596.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 3226970 4537137 MSMEG_3151 Mycobacterium smegmatis str. MC2 155 enoyl-ACP reductase YP_887466.1 3226161 D 246196 CDS YP_887467.1 118471350 4533234 3226977..3227999 1 NC_008596.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 3227999 hemH 4533234 hemH Mycobacterium smegmatis str. MC2 155 ferrochelatase YP_887467.1 3226977 D 246196 CDS YP_887468.1 118470685 4531748 complement(3228033..3228908) 1 NC_008596.1 hypothetical protein 3228908 4531748 MSMEG_3153 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887468.1 3228033 R 246196 CDS YP_887469.1 118469753 4532817 3228967..3229401 1 NC_008596.1 identified by match to protein family HMM PF01957; membrane protease regulatory membrane protein 3229401 4532817 MSMEG_3154 Mycobacterium smegmatis str. MC2 155 membrane protease regulatory membrane protein YP_887469.1 3228967 D 246196 CDS YP_887470.1 118468092 4536020 3229445..3230671 1 NC_008596.1 identified by match to protein family HMM PF01145; hypothetical protein 3230671 4536020 MSMEG_3155 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887470.1 3229445 D 246196 CDS YP_887471.1 118473152 4532593 3230729..3231052 1 NC_008596.1 hypothetical protein 3231052 4532593 MSMEG_3156 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887471.1 3230729 D 246196 CDS YP_887472.1 118471288 4532182 complement(3231067..3231804) 1 NC_008596.1 hypothetical protein 3231804 4532182 MSMEG_3157 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887472.1 3231067 R 246196 CDS YP_887473.1 118467931 4533410 3231961..3233832 1 NC_008596.1 identified by match to protein family HMM PF01642; match to protein family HMM TIGR00642; methylmalonyl-CoA mutase, small subunit 3233832 mutA 4533410 mutA Mycobacterium smegmatis str. MC2 155 methylmalonyl-CoA mutase, small subunit YP_887473.1 3231961 D 246196 CDS YP_887474.1 118472812 4536666 3233834..3236089 1 NC_008596.1 MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 3236089 4536666 MSMEG_3159 Mycobacterium smegmatis str. MC2 155 methylmalonyl-CoA mutase YP_887474.1 3233834 D 246196 CDS YP_887475.1 118471590 4536541 3236097..3237074 1 NC_008596.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transporters, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transporter ATPase 3237074 4536541 MSMEG_3160 Mycobacterium smegmatis str. MC2 155 arginine/ornithine transporter ATPase YP_887475.1 3236097 D 246196 CDS YP_887476.1 118470842 4534296 3237127..3237477 1 NC_008596.1 hypothetical protein 3237477 4534296 MSMEG_3161 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887476.1 3237127 D 246196 CDS YP_887477.1 118469819 4532845 3237553..3238818 1 NC_008596.1 identified by match to protein family HMM PF00144; beta-lactamase 3238818 4532845 MSMEG_3162 Mycobacterium smegmatis str. MC2 155 beta-lactamase YP_887477.1 3237553 D 246196 CDS YP_887478.1 118473293 4535555 complement(3238864..3239595) 1 NC_008596.1 gp55 protein 3239595 4535555 MSMEG_3163 Mycobacterium smegmatis str. MC2 155 gp55 protein YP_887478.1 3238864 R 246196 CDS YP_887479.1 118471558 4532206 complement(3239637..3239999) 1 NC_008596.1 hypothetical protein 3239999 4532206 MSMEG_3164 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887479.1 3239637 R 246196 CDS YP_887480.1 118470820 4531931 3240241..3240942 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 3240942 4531931 MSMEG_3165 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_887480.1 3240241 D 246196 CDS YP_887481.1 118468159 4535031 complement(3240950..3242272) 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 3242272 4535031 MSMEG_3166 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_887481.1 3240950 R 246196 CDS YP_887482.1 118469814 4532840 3241991..3242389 1 NC_008596.1 hypothetical protein 3242389 4532840 MSMEG_3167 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887482.1 3241991 D 246196 CDS YP_887483.1 118471405 4534881 3242433..3242996 1 NC_008596.1 phenolpthiocerol synthesis type-i polyketide synthase ppse 3242996 4534881 MSMEG_3168 Mycobacterium smegmatis str. MC2 155 phenolpthiocerol synthesis type-i polyketide synthase ppse YP_887483.1 3242433 D 246196 CDS YP_887484.1 118472995 4531287 3243269..3246391 1 NC_008596.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 3246391 ileS 4531287 ileS Mycobacterium smegmatis str. MC2 155 isoleucyl-tRNA synthetase YP_887484.1 3243269 D 246196 CDS YP_887485.1 118468517 4535498 complement(3246446..3246664) 1 NC_008596.1 identified by match to protein family HMM PF01479; hypothetical protein 3246664 4535498 MSMEG_3170 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887485.1 3246446 R 246196 CDS YP_887486.1 118473834 4531988 3246698..3248089 1 NC_008596.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 3248089 4531988 MSMEG_3172 Mycobacterium smegmatis str. MC2 155 DNA polymerase IV YP_887486.1 3246698 D 246196 CDS YP_887487.1 118469460 4535723 complement(3248071..3248559) 1 NC_008596.1 hypothetical protein 3248559 4535723 MSMEG_3171 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887487.1 3248071 R 246196 CDS YP_887488.1 118472191 4530849 complement(3248591..3249553) 1 NC_008596.1 identified by match to protein family HMM PF00710; L-asparaginase 3249553 4530849 MSMEG_3173 Mycobacterium smegmatis str. MC2 155 L-asparaginase YP_887488.1 3248591 R 246196 CDS YP_887489.1 118473336 4532001 3249596..3250303 1 NC_008596.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 3250303 lspA 4532001 lspA Mycobacterium smegmatis str. MC2 155 lipoprotein signal peptidase YP_887489.1 3249596 D 246196 CDS YP_887490.1 118471435 4535110 3250303..3251232 1 NC_008596.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase D 3251232 4535110 MSMEG_3175 Mycobacterium smegmatis str. MC2 155 ribosomal large subunit pseudouridine synthase D YP_887490.1 3250303 D 246196 CDS YP_887491.1 118472770 4531861 3251229..3252143 1 NC_008596.1 identified by match to protein family HMM PF00892; match to protein family HMM TIGR00688; RarD protein 3252143 rarD 4531861 rarD Mycobacterium smegmatis str. MC2 155 RarD protein YP_887491.1 3251229 D 246196 CDS YP_887492.1 118469991 4533114 3252280..3252924 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulatory protein 3252924 4533114 MSMEG_3177 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_887492.1 3252280 D 246196 CDS YP_887493.1 118469839 4532730 3253007..3256561 1 NC_008596.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 3256561 dnaE 4532730 dnaE Mycobacterium smegmatis str. MC2 155 DNA polymerase III subunit alpha YP_887493.1 3253007 D 246196 CDS YP_887494.1 118473954 4533900 complement(3256584..3257036) 1 NC_008596.1 identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 3257036 4533900 MSMEG_3179 Mycobacterium smegmatis str. MC2 155 pyridoxamine 5'-phosphate oxidase YP_887494.1 3256584 R 246196 CDS YP_887495.1 118471531 4537611 3257094..3257483 1 NC_008596.1 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 3257483 4537611 MSMEG_3180 Mycobacterium smegmatis str. MC2 155 MerR family transcriptional regulator YP_887495.1 3257094 D 246196 CDS YP_887496.1 118473371 4530848 3257504..3257905 1 NC_008596.1 hypothetical protein 3257905 4530848 MSMEG_3181 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887496.1 3257504 D 246196 CDS YP_887497.1 118468761 4534250 3257923..3258243 1 NC_008596.1 hypothetical protein 3258243 4534250 MSMEG_3182 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887497.1 3257923 D 246196 CDS YP_887498.1 118467921 4532654 3258382..3259674 1 NC_008596.1 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase 3259674 ilvA 4532654 ilvA Mycobacterium smegmatis str. MC2 155 threonine dehydratase YP_887498.1 3258382 D 246196 CDS YP_887499.1 118469689 4536822 complement(3259770..3261521) 1 NC_008596.1 identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402; malto-oligosyltrehalose trehalohydrolase 3261521 treZ 4536822 treZ Mycobacterium smegmatis str. MC2 155 malto-oligosyltrehalose trehalohydrolase YP_887499.1 3259770 R 246196 CDS YP_887500.1 118472581 4534361 complement(3263798..3265954) 1 NC_008596.1 identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02100; glycogen debranching protein GlgX 3265954 glgX 4534361 glgX Mycobacterium smegmatis str. MC2 155 glycogen debranching protein GlgX YP_887500.1 3263798 R 246196 CDS YP_887501.1 118471295 4532189 complement(3265959..3268118) 1 NC_008596.1 identified by match to protein family HMM PF01757; acyltransferase domain-containing protein 3268118 4532189 MSMEG_3187 Mycobacterium smegmatis str. MC2 155 acyltransferase domain-containing protein YP_887501.1 3265959 R 246196 CDS YP_887502.1 118472009 4533610 3268212..3269510 1 NC_008596.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 3269510 bioA 4533610 bioA Mycobacterium smegmatis str. MC2 155 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_887502.1 3268212 D 246196 CDS YP_887503.1 118471070 4537143 3269639..3270787 1 NC_008596.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 3270787 bioF 4537143 bioF Mycobacterium smegmatis str. MC2 155 8-amino-7-oxononanoate synthase YP_887503.1 3269639 D 246196 CDS YP_887504.1 118469522 4536726 3270784..3271461 1 NC_008596.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 3271461 bioD 4536726 bioD Mycobacterium smegmatis str. MC2 155 dithiobiotin synthetase YP_887504.1 3270784 D 246196 CDS YP_887505.1 118471806 4536338 3271486..3271995 1 NC_008596.1 hypothetical protein 3271995 4536338 MSMEG_3191 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887505.1 3271486 D 246196 CDS YP_887506.1 118468937 4537471 3272008..3272769 1 NC_008596.1 identified by match to protein family HMM TIGR03083; hypothetical protein 3272769 4537471 MSMEG_3192 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887506.1 3272008 D 246196 CDS YP_887507.1 118471795 4536327 complement(3272770..3273387) 1 NC_008596.1 identified by match to protein family HMM PF00440; match to protein family HMM PF02909; TetR family transcriptional regulator 3273387 4536327 MSMEG_3193 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_887507.1 3272770 R 246196 CDS YP_887508.1 118471396 4534990 3273453..3274514 1 NC_008596.1 catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine; biotin synthase 3274514 bioB 4534990 bioB Mycobacterium smegmatis str. MC2 155 biotin synthase YP_887508.1 3273453 D 246196 CDS YP_887509.1 118470836 4532522 3274521..3274763 1 NC_008596.1 hypothetical protein 3274763 4532522 MSMEG_3195 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887509.1 3274521 D 246196 CDS YP_887510.1 118473976 4533047 3274778..3275455 1 NC_008596.1 hypothetical protein 3275455 4533047 MSMEG_3196 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887510.1 3274778 D 246196 CDS YP_887511.1 118473723 4536957 complement(3275485..3276816) 1 NC_008596.1 identified by match to protein family HMM PF03583; lipase 3276816 4536957 MSMEG_3197 Mycobacterium smegmatis str. MC2 155 lipase YP_887511.1 3275485 R 246196 CDS YP_887512.1 118471529 4537240 complement(3276859..3277524) 1 NC_008596.1 identified by match to protein family HMM PF00293; NUDIX family hydrolase 3277524 4537240 MSMEG_3198 Mycobacterium smegmatis str. MC2 155 NUDIX family hydrolase YP_887512.1 3276859 R 246196 CDS YP_887513.1 118467613 4533075 3277598..3278641 1 NC_008596.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 3278641 nadA 4533075 nadA Mycobacterium smegmatis str. MC2 155 quinolinate synthetase YP_887513.1 3277598 D 246196 CDS YP_887514.1 118473001 4531293 3278638..3280233 1 NC_008596.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 3280233 nadB 4531293 nadB Mycobacterium smegmatis str. MC2 155 L-aspartate oxidase YP_887514.1 3278638 D 246196 CDS YP_887515.1 118469157 4534743 3280227..3281093 1 NC_008596.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 3281093 nadC 4534743 nadC Mycobacterium smegmatis str. MC2 155 nicotinate-nucleotide pyrophosphorylase YP_887515.1 3280227 D 246196 CDS YP_887516.1 118468086 4536014 complement(3281139..3282659) 1 NC_008596.1 hypothetical protein 3282659 4536014 MSMEG_3202 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887516.1 3281139 R 246196 CDS YP_887517.1 118473682 4531079 complement(3283047..3283682) 1 NC_008596.1 identified by match to protein family HMM PF01810; transporter LysE family protein 3283682 4531079 MSMEG_3203 Mycobacterium smegmatis str. MC2 155 transporter LysE family protein YP_887517.1 3283047 R 246196 CDS YP_887518.1 118469799 4535940 complement(3283704..3284072) 1 NC_008596.1 identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 3284072 4535940 MSMEG_3204 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887518.1 3283704 R 246196 CDS YP_887519.1 118471811 4536304 3284200..3285537 1 NC_008596.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 3285537 hisD 4536304 hisD Mycobacterium smegmatis str. MC2 155 histidinol dehydrogenase YP_887519.1 3284200 D 246196 CDS YP_887520.1 118470857 4534312 3285537..3286676 1 NC_008596.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 3286676 hisC 4534312 hisC Mycobacterium smegmatis str. MC2 155 histidinol-phosphate aminotransferase YP_887520.1 3285537 D 246196 CDS YP_887521.1 118473296 4535558 3286673..3287293 1 NC_008596.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 3287293 hisB 4535558 hisB Mycobacterium smegmatis str. MC2 155 imidazoleglycerol-phosphate dehydratase YP_887521.1 3286673 D 246196 CDS YP_887522.1 118469325 4535914 3287290..3287907 1 NC_008596.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 3287907 hisH 4535914 hisH Mycobacterium smegmatis str. MC2 155 imidazole glycerol phosphate synthase subunit HisH YP_887522.1 3287290 D 246196 CDS YP_887523.1 118470031 4531646 3287922..3288698 1 NC_008596.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide and the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)anthranilate; involved in histidine and tryptophan biosynthesis; phosphoribosyl isomerase A 3288698 4531646 MSMEG_3209 Mycobacterium smegmatis str. MC2 155 phosphoribosyl isomerase A YP_887523.1 3287922 D 246196 CDS YP_887524.1 118468098 4536027 3288695..3289525 1 NC_008596.1 identified by match to protein family HMM PF00459; inositol monophosphate phosphatase 3289525 4536027 MSMEG_3210 Mycobacterium smegmatis str. MC2 155 inositol monophosphate phosphatase YP_887524.1 3288695 D 246196 CDS YP_887525.1 118468252 4533985 3289522..3290307 1 NC_008596.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 3290307 hisF 4533985 hisF Mycobacterium smegmatis str. MC2 155 imidazole glycerol phosphate synthase subunit HisF YP_887525.1 3289522 D 246196 CDS YP_887526.1 118472898 4534041 3290318..3290665 1 NC_008596.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 3290665 hisI 4534041 hisI Mycobacterium smegmatis str. MC2 155 phosphoribosyl-AMP cyclohydrolase YP_887526.1 3290318 D 246196 CDS YP_887527.1 118468875 4533760 3290670..3292352 1 NC_008596.1 hypothetical protein 3292352 4533760 MSMEG_3213 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887527.1 3290670 D 246196 CDS YP_887528.1 118467629 4534203 3292342..3293334 1 NC_008596.1 hypothetical protein 3293334 4534203 MSMEG_3214 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887528.1 3292342 D 246196 CDS YP_887529.1 118472464 4533830 complement(3293342..3294139) 1 NC_008596.1 identified by match to protein family HMM PF00005; molybdenum ABC transporter ATPase 3294139 4533830 MSMEG_3215 Mycobacterium smegmatis str. MC2 155 molybdenum ABC transporter ATPase YP_887529.1 3293342 R 246196 CDS YP_887530.1 118471271 4532145 complement(3294257..3294721) 1 NC_008596.1 identified by match to protein family HMM PF00578; peroxiredoxin Q 3294721 4532145 MSMEG_3216 Mycobacterium smegmatis str. MC2 155 peroxiredoxin Q YP_887530.1 3294257 R 246196 CDS YP_887531.1 118472702 4531670 3294784..3296358 1 NC_008596.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 3296358 trpE 4531670 trpE Mycobacterium smegmatis str. MC2 155 anthranilate synthase component I YP_887531.1 3294784 D 246196 CDS YP_887532.1 118468315 4533794 3296355..3296969 1 NC_008596.1 identified by match to protein family HMM TIGR02234; hypothetical protein 3296969 4533794 MSMEG_3218 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887532.1 3296355 D 246196 CDS YP_887533.1 118472168 4535694 3297046..3297864 1 NC_008596.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 3297864 trpC 4535694 trpC Mycobacterium smegmatis str. MC2 155 indole-3-glycerol-phosphate synthase YP_887533.1 3297046 D 246196 CDS YP_887534.1 118473874 4531122 3297900..3299177 1 NC_008596.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 3299177 trpB 4531122 trpB Mycobacterium smegmatis str. MC2 155 tryptophan synthase subunit beta YP_887534.1 3297900 D 246196 CDS YP_887535.1 118468988 4535098 3299174..3299962 1 NC_008596.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 3299962 trpA 4535098 trpA Mycobacterium smegmatis str. MC2 155 tryptophan synthase subunit alpha YP_887535.1 3299174 D 246196 CDS YP_887536.1 118470576 4531363 3299959..3301809 1 NC_008596.1 identified by match to protein family HMM PF01790; match to protein family HMM TIGR00544; prolipoprotein diacylglyceryl transferase 3301809 4531363 MSMEG_3222 Mycobacterium smegmatis str. MC2 155 prolipoprotein diacylglyceryl transferase YP_887536.1 3299959 D 246196 CDS YP_887537.1 118473125 4531852 3301936..3302223 1 NC_008596.1 identified by match to protein family HMM PF05154; TM2 domain-containing protein 3302223 4531852 MSMEG_3223 Mycobacterium smegmatis str. MC2 155 TM2 domain-containing protein YP_887537.1 3301936 D 246196 CDS YP_887538.1 118472382 4534772 3302213..3302626 1 NC_008596.1 hypothetical protein 3302626 4534772 MSMEG_3224 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887538.1 3302213 D 246196 CDS YP_887539.1 118467916 4532649 3302712..3307268 1 NC_008596.1 identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898; ferredoxin-dependent glutamate synthase 1 3307268 4532649 MSMEG_3225 Mycobacterium smegmatis str. MC2 155 ferredoxin-dependent glutamate synthase 1 YP_887539.1 3302712 D 246196 CDS YP_887540.1 118469374 4535888 3307261..3308763 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF07992; match to protein family HMM TIGR01317; glutamate synthase NADH/NADPH small subunit 3308763 4535888 MSMEG_3226 Mycobacterium smegmatis str. MC2 155 glutamate synthase NADH/NADPH small subunit YP_887540.1 3307261 D 246196 CDS YP_887541.1 118470856 4534311 3308803..3310221 1 NC_008596.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 3310221 pyk 4534311 pyk Mycobacterium smegmatis str. MC2 155 pyruvate kinase YP_887541.1 3308803 D 246196 CDS YP_887542.1 118471470 4534389 3310245..3311108 1 NC_008596.1 identified by match to protein family HMM PF02551; acyl-CoA thioesterase 3311108 4534389 MSMEG_3228 Mycobacterium smegmatis str. MC2 155 acyl-CoA thioesterase YP_887542.1 3310245 D 246196 CDS YP_887543.1 118473423 4537410 complement(3311187..3311981) 1 NC_008596.1 hypothetical protein 3311981 4537410 MSMEG_3229 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887543.1 3311187 R 246196 CDS YP_887544.1 118471604 4536555 complement(3313470..3314999) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR02857; cysteine ABC transporter permease/ATP-binding protein 3314999 cydD 4536555 cydD Mycobacterium smegmatis str. MC2 155 cysteine ABC transporter permease/ATP-binding protein YP_887544.1 3313470 R 246196 CDS YP_887545.1 118469342 4533165 complement(3315095..3316147) 1 NC_008596.1 identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203; cytochrome D ubiquinol oxidase subunit II 3316147 cydB 4533165 cydB Mycobacterium smegmatis str. MC2 155 cytochrome D ubiquinol oxidase subunit II YP_887545.1 3315095 R 246196 CDS YP_887546.1 118468540 4536091 complement(3316161..3317624) 1 NC_008596.1 identified by match to protein family HMM PF01654; cytochrome D ubiquinol oxidase subunit 1 3317624 4536091 MSMEG_3233 Mycobacterium smegmatis str. MC2 155 cytochrome D ubiquinol oxidase subunit 1 YP_887546.1 3316161 R 246196 CDS YP_887547.1 118473018 4532339 complement(3317720..3318295) 1 NC_008596.1 identified by match to protein family HMM PF03729; integral membrane protein 3318295 4532339 MSMEG_3234 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_887547.1 3317720 R 246196 CDS YP_887548.1 118471525 4537236 3318528..3319415 1 NC_008596.1 identified by match to protein family HMM PF00497; amino acid ABC transporter 3319415 4537236 MSMEG_3235 Mycobacterium smegmatis str. MC2 155 amino acid ABC transporter YP_887548.1 3318528 D 246196 CDS YP_887549.1 118470944 4533679 3319425..3320357 1 NC_008596.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter permease 3320357 4533679 MSMEG_3236 Mycobacterium smegmatis str. MC2 155 amino acid ABC transporter permease YP_887549.1 3319425 D 246196 CDS YP_887550.1 118468568 4533703 3320354..3321139 1 NC_008596.1 identified by match to protein family HMM PF00005; ATP-binding protein 3321139 4533703 MSMEG_3237 Mycobacterium smegmatis str. MC2 155 ATP-binding protein YP_887550.1 3320354 D 246196 CDS YP_887551.1 118471645 4536482 3321162..3322022 1 NC_008596.1 identified by match to protein family HMM PF00581; 3-mercaptopyruvate sulfurtransferase 3322022 4536482 MSMEG_3238 Mycobacterium smegmatis str. MC2 155 3-mercaptopyruvate sulfurtransferase YP_887551.1 3321162 D 246196 CDS YP_887552.1 118469303 4532642 3322077..3323213 1 NC_008596.1 identified by match to protein family HMM PF02518; two-component system sensor kinase 3323213 4532642 MSMEG_3239 Mycobacterium smegmatis str. MC2 155 two-component system sensor kinase YP_887552.1 3322077 D 246196 CDS YP_887553.1 118470646 4532405 3323210..3323869 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; LuxR family transcriptional regulator 3323869 4532405 MSMEG_3240 Mycobacterium smegmatis str. MC2 155 LuxR family transcriptional regulator YP_887553.1 3323210 D 246196 CDS YP_887554.1 118472175 4533713 3323913..3325754 1 NC_008596.1 hypothetical protein 3325754 4533713 MSMEG_3241 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887554.1 3323913 D 246196 CDS YP_887555.1 118467648 4534996 3325818..3326303 1 NC_008596.1 identified by match to protein family HMM PF00210; starvation-inducible DNA-binding protein or fine tangled pili major subunit 3326303 4534996 MSMEG_3242 Mycobacterium smegmatis str. MC2 155 starvation-inducible DNA-binding protein or fine tangled pili major subunit YP_887555.1 3325818 D 246196 CDS YP_887556.1 118468797 4535315 3327095..3328519 1 NC_008596.1 hypothetical protein 3328519 4535315 MSMEG_3244 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887556.1 3327095 D 246196 CDS YP_887557.1 118469816 4532842 3328852..3329478 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF03861; response regulator 3329478 4532842 MSMEG_3246 Mycobacterium smegmatis str. MC2 155 response regulator YP_887557.1 3328852 D 246196 CDS YP_887558.1 118470564 4531507 3329756..3330919 1 NC_008596.1 identified by match to protein family HMM PF01094; branched-chain amino acid ABC transporter substrate-binding protein 3330919 4531507 MSMEG_3247 Mycobacterium smegmatis str. MC2 155 branched-chain amino acid ABC transporter substrate-binding protein YP_887558.1 3329756 D 246196 CDS YP_887559.1 118470725 4533940 3330998..3332035 1 NC_008596.1 identified by match to protein family HMM PF02653; branched-chain amino acid ABC transporter permease 3332035 4533940 MSMEG_3248 Mycobacterium smegmatis str. MC2 155 branched-chain amino acid ABC transporter permease YP_887559.1 3330998 D 246196 CDS YP_887560.1 118470269 4537161 3332032..3333246 1 NC_008596.1 identified by match to protein family HMM PF02653; branched-chain amino acid ABC transporter permease 3333246 4537161 MSMEG_3249 Mycobacterium smegmatis str. MC2 155 branched-chain amino acid ABC transporter permease YP_887560.1 3332032 D 246196 CDS YP_887561.1 118473075 4533149 3333243..3334097 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3334097 4533149 MSMEG_3250 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_887561.1 3333243 D 246196 CDS YP_887562.1 118470404 4533465 3334081..3334827 1 NC_008596.1 identified by match to protein family HMM PF00005; branched-chain amino acid ABC transporter ATP-binding protein 3334827 4533465 MSMEG_3251 Mycobacterium smegmatis str. MC2 155 branched-chain amino acid ABC transporter ATP-binding protein YP_887562.1 3334081 D 246196 CDS YP_887563.1 118468777 4535668 3334948..3335274 1 NC_008596.1 identified by match to protein family HMM PF02694; hypothetical protein 3335274 4535668 MSMEG_3252 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887563.1 3334948 D 246196 CDS YP_887564.1 118473348 4532014 complement(3335279..3336166) 1 NC_008596.1 hypothetical protein 3336166 4532014 MSMEG_3253 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887564.1 3335279 R 246196 CDS YP_887565.1 118467834 4535461 complement(3336282..3336767) 1 NC_008596.1 identified by match to protein family HMM PF06271; RDD family protein 3336767 4535461 MSMEG_3254 Mycobacterium smegmatis str. MC2 155 RDD family protein YP_887565.1 3336282 R 246196 CDS YP_887566.1 118472491 4532442 complement(3336777..3337652) 1 NC_008596.1 identified by match to protein family HMM PF07681; DoxX subfamily protein 3337652 4532442 MSMEG_3255 Mycobacterium smegmatis str. MC2 155 DoxX subfamily protein YP_887566.1 3336777 R 246196 CDS YP_887567.1 118471981 4536167 3337685..3337909 1 NC_008596.1 mucin-associated surface protein 3337909 4536167 MSMEG_3256 Mycobacterium smegmatis str. MC2 155 mucin-associated surface protein YP_887567.1 3337685 D 246196 CDS YP_887568.1 118468929 4537463 3337958..3339346 1 NC_008596.1 identified by similarity to SP:P09099; match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312; xylulokinase 3339346 xylB 4537463 xylB Mycobacterium smegmatis str. MC2 155 xylulokinase YP_887568.1 3337958 D 246196 CDS YP_887569.1 118467922 4532655 3339343..3339477 1 NC_008596.1 hypothetical protein 3339477 4532655 MSMEG_3258 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887569.1 3339343 D 246196 CDS YP_887570.1 118468751 4534240 3339524..3340744 1 NC_008596.1 identified by match to protein family HMM PF08028; acyl-CoA dehydrogenase 3340744 4534240 MSMEG_3259 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_887570.1 3339524 D 246196 CDS YP_887571.1 118470702 4532539 3340787..3341722 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 3341722 4532539 MSMEG_3260 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_887571.1 3340787 D 246196 CDS YP_887572.1 118471614 4536527 3341757..3342605 1 NC_008596.1 hypothetical protein 3342605 4536527 MSMEG_3261 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887572.1 3341757 D 246196 CDS YP_887573.1 118473518 4533880 3342704..3344113 1 NC_008596.1 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; xylulose kinase 3344113 4533880 MSMEG_3263 Mycobacterium smegmatis str. MC2 155 xylulose kinase YP_887573.1 3342704 D 246196 CDS YP_887574.1 118471073 4537516 complement(3344098..3344886) 1 NC_008596.1 identified by match to protein family HMM PF00106; L-xylulose reductase 3344886 4537516 MSMEG_3262 Mycobacterium smegmatis str. MC2 155 L-xylulose reductase YP_887574.1 3344098 R 246196 CDS YP_887575.1 118471875 4536251 complement(3344883..3345905) 1 NC_008596.1 identified by match to protein family HMM PF04198; transcriptional regulator 3345905 4536251 MSMEG_3264 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_887575.1 3344883 R 246196 CDS YP_887576.1 118473835 4531989 3346024..3347112 1 NC_008596.1 identified by match to protein family HMM PF00107; arabitol-phosphate dehydrogenase 3347112 4531989 MSMEG_3265 Mycobacterium smegmatis str. MC2 155 arabitol-phosphate dehydrogenase YP_887576.1 3346024 D 246196 CDS YP_887577.1 118473944 4533890 3347124..3348557 1 NC_008596.1 identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409; maltose/maltodextrin-binding protein 3348557 4533890 MSMEG_3266 Mycobacterium smegmatis str. MC2 155 maltose/maltodextrin-binding protein YP_887577.1 3347124 D 246196 CDS YP_887578.1 118472350 4531601 3348569..3349522 1 NC_008596.1 identified by match to protein family HMM PF00528; transporter 3349522 4531601 MSMEG_3267 Mycobacterium smegmatis str. MC2 155 transporter YP_887578.1 3348569 D 246196 CDS YP_887579.1 118470822 4532508 3349525..3350397 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 3350397 4532508 MSMEG_3268 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_887579.1 3349525 D 246196 CDS YP_887580.1 118472359 4531610 3350397..3351506 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF03459; sugar ABC transporter ATP-binding protein 3351506 4531610 MSMEG_3269 Mycobacterium smegmatis str. MC2 155 sugar ABC transporter ATP-binding protein YP_887580.1 3350397 D 246196 CDS YP_887581.1 118472653 4535073 3351503..3352636 1 NC_008596.1 identified by match to protein family HMM PF00005; sn-glycerol-3-phosphate ABC transporter ATP-binding protein 3352636 4535073 MSMEG_3270 Mycobacterium smegmatis str. MC2 155 sn-glycerol-3-phosphate ABC transporter ATP-binding protein YP_887581.1 3351503 D 246196 CDS YP_887582.1 118468715 4532785 3352633..3354375 1 NC_008596.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase 3354375 4532785 MSMEG_3271 Mycobacterium smegmatis str. MC2 155 dihydroxyacetone kinase YP_887582.1 3352633 D 246196 CDS YP_887583.1 118467943 4533423 3354375..3354836 1 NC_008596.1 identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR02133; ribose 5-phosphate isomerase 3354836 4533423 MSMEG_3272 Mycobacterium smegmatis str. MC2 155 ribose 5-phosphate isomerase YP_887583.1 3354375 D 246196 CDS YP_887584.1 118472267 4531576 3354888..3355973 1 NC_008596.1 identified by match to protein family HMM PF01546; match to protein family HMM PF05343; glutamyl aminopeptidase, M42 family protein 3355973 4531576 MSMEG_3273 Mycobacterium smegmatis str. MC2 155 glutamyl aminopeptidase, M42 family protein YP_887584.1 3354888 D 246196 CDS YP_887585.1 118473032 4533185 3356052..3356885 1 NC_008596.1 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 3356885 4533185 MSMEG_3274 Mycobacterium smegmatis str. MC2 155 MerR family transcriptional regulator YP_887585.1 3356052 D 246196 CDS YP_887586.1 118468651 4535227 3357384..3358010 1 NC_008596.1 identified by match to protein family HMM TIGR02937; igma-70 family RNA polymerase sigma factor 3358010 4535227 MSMEG_3275 Mycobacterium smegmatis str. MC2 155 igma-70 family RNA polymerase sigma factor YP_887586.1 3357384 D 246196 CDS YP_887587.1 118473692 4531089 3358295..3359179 1 NC_008596.1 identified by match to protein family HMM PF00892; integral membrane protein 3359179 4531089 MSMEG_3276 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_887587.1 3358295 D 246196 CDS YP_887588.1 118472188 4533726 3359219..3359566 1 NC_008596.1 hypothetical protein 3359566 4533726 MSMEG_3278 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887588.1 3359219 D 246196 CDS YP_887589.1 118471096 4535861 complement(3359563..3360411) 1 NC_008596.1 identified by match to protein family HMM PF00528; polyamine ABC transporter integral membrane protein 3360411 4535861 MSMEG_3277 Mycobacterium smegmatis str. MC2 155 polyamine ABC transporter integral membrane protein YP_887589.1 3359563 R 246196 CDS YP_887590.1 118468515 4535496 complement(3360408..3361229) 1 NC_008596.1 identified by match to protein family HMM PF00528; polyamine ABC transporter permease 3361229 4535496 MSMEG_3279 Mycobacterium smegmatis str. MC2 155 polyamine ABC transporter permease YP_887590.1 3360408 R 246196 CDS YP_887591.1 118470848 4534303 complement(3361287..3362480) 1 NC_008596.1 identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409; polyamine-binding lipoprotein 3362480 4534303 MSMEG_3280 Mycobacterium smegmatis str. MC2 155 polyamine-binding lipoprotein YP_887591.1 3361287 R 246196 CDS YP_887592.1 118468201 4536642 complement(3362546..3363814) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM TIGR01187; spermidine/putrescine ABC transporter ATP-binding protein 3363814 4536642 MSMEG_3281 Mycobacterium smegmatis str. MC2 155 spermidine/putrescine ABC transporter ATP-binding protein YP_887592.1 3362546 R 246196 CDS YP_887593.1 118472110 4537491 3363710..3363892 1 NC_008596.1 hypothetical protein 3363892 4537491 MSMEG_3282 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887593.1 3363710 D 246196 CDS YP_887594.1 118473925 4537363 complement(3364011..3365477) 1 NC_008596.1 identified by match to protein family HMM PF07690; membrane transporter 3365477 4537363 MSMEG_3283 Mycobacterium smegmatis str. MC2 155 membrane transporter YP_887594.1 3364011 R 246196 CDS YP_887595.1 118467869 4532891 complement(3365617..3366036) 1 NC_008596.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 3366036 4532891 MSMEG_3284 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_887595.1 3365617 R 246196 CDS YP_887596.1 118470799 4536083 complement(3366127..3367197) 1 NC_008596.1 identified by match to protein family HMM PF00180; 3-isopropylmalate dehydrogenase 3367197 4536083 MSMEG_3285 Mycobacterium smegmatis str. MC2 155 3-isopropylmalate dehydrogenase YP_887596.1 3366127 R 246196 CDS YP_887597.1 118468434 4535592 complement(3367206..3367937) 1 NC_008596.1 methyltransferase 3367937 4535592 MSMEG_3286 Mycobacterium smegmatis str. MC2 155 methyltransferase YP_887597.1 3367206 R 246196 CDS YP_887598.1 118468791 4535309 complement(3367954..3368817) 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 3368817 4535309 MSMEG_3287 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_887598.1 3367954 R 246196 CDS YP_887599.1 118471576 4534438 3368990..3369637 1 NC_008596.1 identified by match to protein family HMM PF01476; LysM domain-containing protein 3369637 4534438 MSMEG_3288 Mycobacterium smegmatis str. MC2 155 LysM domain-containing protein YP_887599.1 3368990 D 246196 CDS YP_887600.1 118469726 4537601 3369713..3370798 1 NC_008596.1 identified by match to protein family HMM PF00561; gp61 protein 3370798 4537601 MSMEG_3289 Mycobacterium smegmatis str. MC2 155 gp61 protein YP_887600.1 3369713 D 246196 CDS YP_887601.1 118468504 4535485 3370884..3373658 1 NC_008596.1 identified by match to protein family HMM PF00196; regulatory protein 3373658 4535485 MSMEG_3290 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_887601.1 3370884 D 246196 CDS YP_887602.1 118473097 4531158 complement(3373908..3374081) 1 NC_008596.1 hypothetical protein 3374081 4531158 MSMEG_3291 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887602.1 3373908 R 246196 CDS YP_887603.1 118468668 4535244 3374137..3374979 1 NC_008596.1 DNA-binding protein 3374979 4535244 MSMEG_3292 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_887603.1 3374137 D 246196 CDS YP_887604.1 118474022 4533435 complement(3375012..3375185) 1 NC_008596.1 hypothetical protein 3375185 4533435 MSMEG_3293 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887604.1 3375012 R 246196 CDS YP_887605.1 118470953 4533689 3375207..3375320 1 NC_008596.1 hypothetical protein 3375320 4533689 MSMEG_3294 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887605.1 3375207 D 246196 CDS YP_887606.1 118471292 4532186 3375332..3375463 1 NC_008596.1 hypothetical protein 3375463 4532186 MSMEG_3295 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887606.1 3375332 D 246196 CDS YP_887607.1 118472796 4533139 3375472..3376029 1 NC_008596.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; ECF-family protein sigma factor H 3376029 4533139 MSMEG_3296 Mycobacterium smegmatis str. MC2 155 ECF-family protein sigma factor H YP_887607.1 3375472 D 246196 CDS YP_887608.1 118470675 4531738 3376204..3377424 1 NC_008596.1 identified by match to protein family HMM PF00486; match to protein family HMM PF00561; CadC family transcriptional regulator 3377424 4531738 MSMEG_3297 Mycobacterium smegmatis str. MC2 155 CadC family transcriptional regulator YP_887608.1 3376204 D 246196 CDS YP_887609.1 118473738 4537343 3377556..3378146 1 NC_008596.1 identified by match to protein family HMM PF07080; response regulator receiver domain-containing protein 3378146 4537343 MSMEG_3298 Mycobacterium smegmatis str. MC2 155 response regulator receiver domain-containing protein YP_887609.1 3377556 D 246196 CDS YP_887610.1 118470741 4533292 3379139..3380224 1 NC_008596.1 identified by match to protein family HMM PF01408; oxidoreductase, Gfo/Idh/MocA family protein 3380224 4533292 MSMEG_3300 Mycobacterium smegmatis str. MC2 155 oxidoreductase, Gfo/Idh/MocA family protein YP_887610.1 3379139 D 246196 CDS YP_887611.1 118467430 4536046 3380231..3381091 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 3381091 4536046 MSMEG_3301 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887611.1 3380231 D 246196 CDS YP_887612.1 118470331 4534914 3381095..3381979 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short-chain dehydrogenase/reductase SDR 3381979 4534914 MSMEG_3302 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase SDR YP_887612.1 3381095 D 246196 CDS YP_887613.1 118469704 4537209 3382070..3383518 1 NC_008596.1 identified by match to protein family HMM PF03403; carboxylic ester hydrolase 3383518 4537209 MSMEG_3303 Mycobacterium smegmatis str. MC2 155 carboxylic ester hydrolase YP_887613.1 3382070 D 246196 CDS YP_887614.1 118473946 4533892 3383593..3384945 1 NC_008596.1 identified by match to protein family HMM PF00171; succinate semialdehyde dehydrogenase 3384945 4533892 MSMEG_3304 Mycobacterium smegmatis str. MC2 155 succinate semialdehyde dehydrogenase YP_887614.1 3383593 D 246196 CDS YP_887615.1 118468296 4533054 3384988..3385890 1 NC_008596.1 identified by match to protein family HMM PF00892; hypothetical protein 3385890 4533054 MSMEG_3305 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887615.1 3384988 D 246196 CDS YP_887616.1 118472205 4530863 3386138..3387082 1 NC_008596.1 identified by match to protein family HMM PF00107; zinc-binding alcohol dehydrogenase 3387082 4530863 MSMEG_3306 Mycobacterium smegmatis str. MC2 155 zinc-binding alcohol dehydrogenase YP_887616.1 3386138 D 246196 CDS YP_887617.1 118468602 4532382 3388088..3388576 1 NC_008596.1 identified by match to protein family HMM PF00582; universal stress protein family protein 3388576 4532382 MSMEG_3308 Mycobacterium smegmatis str. MC2 155 universal stress protein family protein YP_887617.1 3388088 D 246196 CDS YP_887618.1 118469854 4530892 3388626..3389927 1 NC_008596.1 catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta 3389927 4530892 MSMEG_3309 Mycobacterium smegmatis str. MC2 155 tryptophan synthase subunit beta YP_887618.1 3388626 D 246196 CDS YP_887619.1 118471990 4536137 3390024..3390854 1 NC_008596.1 identified by match to protein family HMM PF06724; integral membrane protein 3390854 4536137 MSMEG_3310 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_887619.1 3390024 D 246196 CDS YP_887620.1 118468472 4537293 complement(3390856..3391146) 1 NC_008596.1 acyl carrier protein 3391146 4537293 MSMEG_3311 Mycobacterium smegmatis str. MC2 155 acyl carrier protein YP_887620.1 3390856 R 246196 CDS YP_887621.1 118473167 4532569 3391207..3391764 1 NC_008596.1 identified by match to protein family HMM PF01814; hemerythrin HHE cation binding domain-containing protein 3391764 4532569 MSMEG_3312 Mycobacterium smegmatis str. MC2 155 hemerythrin HHE cation binding domain-containing protein YP_887621.1 3391207 D 246196 CDS YP_887622.1 118469208 4533262 complement(3391777..3392985) 1 NC_008596.1 identified by match to protein family HMM PF00480; xylose repressor 3392985 4533262 MSMEG_3313 Mycobacterium smegmatis str. MC2 155 xylose repressor YP_887622.1 3391777 R 246196 CDS YP_887623.1 118469933 4535844 3393017..3394192 1 NC_008596.1 identified by match to protein family HMM PF07690; transporter 3394192 4535844 MSMEG_3314 Mycobacterium smegmatis str. MC2 155 transporter YP_887623.1 3393017 D 246196 CDS YP_887624.1 118471376 4535284 complement(3394195..3394488) 1 NC_008596.1 hypothetical protein 3394488 4535284 MSMEG_3315 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887624.1 3394195 R 246196 CDS YP_887625.1 118472136 4532473 3394773..3395795 1 NC_008596.1 identified by match to protein family HMM PF01113; match to protein family HMM PF01408; match to protein family HMM PF02629; dihydrodipicolinate reductase N-terminus domain-containing protein 3395795 dapB 4532473 dapB Mycobacterium smegmatis str. MC2 155 dihydrodipicolinate reductase N-terminus domain-containing protein YP_887625.1 3394773 D 246196 CDS YP_887626.1 118467695 4537333 complement(3395749..3397227) 1 NC_008596.1 identified by match to protein family HMM PF07690; transporter major facilitator family protein 3397227 4537333 MSMEG_3316 Mycobacterium smegmatis str. MC2 155 transporter major facilitator family protein YP_887626.1 3395749 R 246196 CDS YP_887627.1 118468854 4535627 complement(3397224..3398450) 1 NC_008596.1 identified by match to protein family HMM PF01494; oxidoreductase 3398450 4535627 MSMEG_3318 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_887627.1 3397224 R 246196 CDS YP_887628.1 118468216 4537029 3398604..3399185 1 NC_008596.1 identified by match to protein family HMM PF00440; repressor protein 3399185 4537029 MSMEG_3319 Mycobacterium smegmatis str. MC2 155 repressor protein YP_887628.1 3398604 D 246196 CDS YP_887629.1 118471100 4535865 3400223..3402250 1 NC_008596.1 ATP/GTP-binding protein 3402250 4535865 MSMEG_3321 Mycobacterium smegmatis str. MC2 155 ATP/GTP-binding protein YP_887629.1 3400223 D 246196 CDS YP_887630.1 118472512 4533742 3402308..3403102 1 NC_008596.1 hypothetical protein 3403102 4533742 MSMEG_3322 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887630.1 3402308 D 246196 CDS YP_887631.1 118473164 4532566 3403263..3403796 1 NC_008596.1 hypothetical protein 3403796 4532566 MSMEG_3323 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887631.1 3403263 D 246196 CDS YP_887632.1 118472604 4536882 3403857..3404060 1 NC_008596.1 hypothetical protein 3404060 4536882 MSMEG_3324 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887632.1 3403857 D 246196 CDS YP_887633.1 118470664 4534673 complement(3404121..3404624) 1 NC_008596.1 hypothetical protein 3404624 4534673 MSMEG_3325 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887633.1 3404121 R 246196 CDS YP_887634.1 118467915 4532648 complement(3404832..3406022) 1 NC_008596.1 identified by match to protein family HMM PF04107; match to protein family HMM TIGR02050; carboxylate-amine ligase 3406022 4532648 MSMEG_3326 Mycobacterium smegmatis str. MC2 155 carboxylate-amine ligase YP_887634.1 3404832 R 246196 CDS YP_887635.1 118468702 4534692 complement(3406544..3406639) 1 NC_008596.1 hypothetical protein 3406639 4534692 MSMEG_3327 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887635.1 3406544 R 246196 CDS YP_887636.1 118467765 4533396 complement(3406973..3407374) 1 NC_008596.1 hypothetical protein 3407374 4533396 MSMEG_3328 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887636.1 3406973 R 246196 CDS YP_887637.1 118468733 4534261 complement(3407520..3407699) 1 NC_008596.1 hypothetical protein 3407699 4534261 MSMEG_3329 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887637.1 3407520 R 246196 CDS YP_887638.1 118472684 4532949 complement(3407751..3407924) 1 NC_008596.1 identified by match to protein family HMM PF05532; hypothetical protein 3407924 4532949 MSMEG_3330 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887638.1 3407751 R 246196 CDS YP_887639.1 118473554 4532425 complement(3407950..3408447) 1 NC_008596.1 hypothetical protein 3408447 4532425 MSMEG_3331 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887639.1 3407950 R 246196 CDS YP_887640.1 118468447 4536895 3408671..3409429 1 NC_008596.1 identified by match to protein family HMM PF00440; match to protein family HMM PF02909; TetR family transcriptional regulator 3409429 4536895 MSMEG_3332 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_887640.1 3408671 D 246196 CDS YP_887641.1 118473508 4533870 complement(3411240..3411365) 1 NC_008596.1 hypothetical protein 3411365 4533870 MSMEG_3334 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887641.1 3411240 R 246196 CDS YP_887642.1 118472807 4536661 3412441..3413250 1 NC_008596.1 identified by match to protein family HMM PF01614; IclR family transcriptional regulator 3413250 4536661 MSMEG_3335 Mycobacterium smegmatis str. MC2 155 IclR family transcriptional regulator YP_887642.1 3412441 D 246196 CDS YP_887643.1 118471640 4536515 complement(3413291..3414058) 1 NC_008596.1 identified by match to protein family HMM PF00561; hydrolase 3414058 4536515 MSMEG_3336 Mycobacterium smegmatis str. MC2 155 hydrolase YP_887643.1 3413291 R 246196 CDS YP_887644.1 118470353 4534628 complement(3414146..3414412) 1 NC_008596.1 hypothetical protein 3414412 4534628 MSMEG_3337 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887644.1 3414146 R 246196 CDS YP_887645.1 118469808 4535949 3414655..3415773 1 NC_008596.1 identified by match to protein family HMM PF00724; FAD/FMN-binding oxidoreductase 3415773 4535949 MSMEG_3338 Mycobacterium smegmatis str. MC2 155 FAD/FMN-binding oxidoreductase YP_887645.1 3414655 D 246196 CDS YP_887646.1 118468798 4535316 complement(3416136..3416414) 1 NC_008596.1 hypothetical protein 3416414 4535316 MSMEG_3339 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887646.1 3416136 R 246196 CDS YP_887647.1 118473417 4537404 complement(3416615..3416989) 1 NC_008596.1 hypothetical protein 3416989 4537404 MSMEG_3340 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887647.1 3416615 R 246196 CDS YP_887648.1 118470957 4534529 complement(3417007..3418218) 1 NC_008596.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; transposase IS116/IS110/IS902 3418218 4534529 MSMEG_3341 Mycobacterium smegmatis str. MC2 155 transposase IS116/IS110/IS902 YP_887648.1 3417007 R 246196 CDS YP_887649.1 118471897 4536234 3418987..3419235 1 NC_008596.1 hypothetical protein 3419235 4536234 MSMEG_3342 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887649.1 3418987 D 246196 CDS YP_887650.1 118470050 4534595 3419267..3420439 1 NC_008596.1 hypothetical protein 3420439 4534595 MSMEG_3343 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887650.1 3419267 D 246196 CDS YP_887651.1 118469077 4537632 complement(3420444..3421532) 1 NC_008596.1 hypothetical protein 3421532 4537632 MSMEG_3344 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887651.1 3420444 R 246196 CDS YP_887652.1 118467586 4531402 complement(3421734..3422429) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 3422429 4531402 MSMEG_3345 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_887652.1 3421734 R 246196 CDS YP_887653.1 118468548 4536100 3422532..3423314 1 NC_008596.1 identified by match to protein family HMM PF03328; hydroxyacid aldolase 3423314 4536100 MSMEG_3346 Mycobacterium smegmatis str. MC2 155 hydroxyacid aldolase YP_887653.1 3422532 D 246196 CDS YP_887654.1 118472882 4534025 3423311..3424108 1 NC_008596.1 identified by match to protein family HMM PF00795; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3424108 4534025 MSMEG_3347 Mycobacterium smegmatis str. MC2 155 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_887654.1 3423311 D 246196 CDS YP_887655.1 118471430 4532813 3424110..3425210 1 NC_008596.1 identified by match to protein family HMM PF03480; extracellular solute-binding protein 3425210 4532813 MSMEG_3348 Mycobacterium smegmatis str. MC2 155 extracellular solute-binding protein YP_887655.1 3424110 D 246196 CDS YP_887656.1 118467608 4533070 3425207..3425725 1 NC_008596.1 trap dicarboxylate transporter dctq subunit 3425725 4533070 MSMEG_3349 Mycobacterium smegmatis str. MC2 155 trap dicarboxylate transporter dctq subunit YP_887656.1 3425207 D 246196 CDS YP_887657.1 118473852 4533552 3425722..3427083 1 NC_008596.1 identified by match to protein family HMM PF06808; TRAP transporter DctM-like membrane protein 3427083 4533552 MSMEG_3350 Mycobacterium smegmatis str. MC2 155 TRAP transporter DctM-like membrane protein YP_887657.1 3425722 D 246196 CDS YP_887658.1 118468174 4535046 3427103..3427399 1 NC_008596.1 hypothetical protein 3427399 4535046 MSMEG_3351 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887658.1 3427103 D 246196 CDS YP_887659.1 118472460 4533601 complement(3427593..3428096) 1 NC_008596.1 hypothetical protein 3428096 4533601 MSMEG_3352 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887659.1 3427593 R 246196 CDS YP_887660.1 118473337 4532002 3428505..3428870 1 NC_008596.1 hypothetical protein 3428870 4532002 MSMEG_3353 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887660.1 3428505 D 246196 CDS YP_887661.1 118470736 4533287 3429446..3430054 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3430054 4533287 MSMEG_3354 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_887661.1 3429446 D 246196 CDS YP_887662.1 118468664 4535240 3430051..3430938 1 NC_008596.1 identified by similarity to GB:CAE31701.1; match to protein family HMM PF01370; match to protein family HMM PF05368; hypothetical protein 3430938 4535240 MSMEG_3355 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887662.1 3430051 D 246196 CDS YP_887663.1 118473576 4531010 3431015..3431353 1 NC_008596.1 identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 3431353 4531010 MSMEG_3356 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887663.1 3431015 D 246196 CDS YP_887664.1 118468629 4535027 3431438..3432004 1 NC_008596.1 metal-dependent phosphohydrolase 3432004 4535027 MSMEG_3357 Mycobacterium smegmatis str. MC2 155 metal-dependent phosphohydrolase YP_887664.1 3431438 D 246196 CDS YP_887665.1 118469857 4530895 3432244..3432795 1 NC_008596.1 identified by match to protein family HMM PF07152; YaeQ protein 3432795 4530895 MSMEG_3358 Mycobacterium smegmatis str. MC2 155 YaeQ protein YP_887665.1 3432244 D 246196 CDS YP_887666.1 118470587 4531374 3433116..3433571 1 NC_008596.1 identified by match to protein family HMM PF01361; cis-3-chloroacrylic acid dehalogenase 3433571 4531374 MSMEG_3359 Mycobacterium smegmatis str. MC2 155 cis-3-chloroacrylic acid dehalogenase YP_887666.1 3433116 D 246196 CDS YP_887667.1 118470735 4533286 complement(3433691..3434278) 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 3434278 4533286 MSMEG_3360 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_887667.1 3433691 R 246196 CDS YP_887668.1 118471894 4536231 complement(3434447..3435112) 1 NC_008596.1 hypothetical protein 3435112 4536231 MSMEG_3361 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887668.1 3434447 R 246196 CDS YP_887669.1 118471231 4534418 complement(3435357..3436148) 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3436148 4534418 MSMEG_3362 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_887669.1 3435357 R 246196 CDS YP_887670.1 118472006 4533607 3436349..3436951 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3436951 4533607 MSMEG_3363 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_887670.1 3436349 D 246196 CDS YP_887671.1 118473193 4533310 3436955..3437581 1 NC_008596.1 identified by match to protein family HMM PF01810; RhtB family protein transporter 3437581 4533310 MSMEG_3364 Mycobacterium smegmatis str. MC2 155 RhtB family protein transporter YP_887671.1 3436955 D 246196 CDS YP_887672.1 118469488 4534462 3437657..3438670 1 NC_008596.1 identified by match to protein family HMM PF00165; match to protein family HMM PF01965; AraC family transcriptional regulator 3438670 4534462 MSMEG_3365 Mycobacterium smegmatis str. MC2 155 AraC family transcriptional regulator YP_887672.1 3437657 D 246196 CDS YP_887673.1 118470441 4532232 3438709..3439404 1 NC_008596.1 identified by match to protein family HMM PF01965; isonitrile hydratase 3439404 4532232 MSMEG_3366 Mycobacterium smegmatis str. MC2 155 isonitrile hydratase YP_887673.1 3438709 D 246196 CDS YP_887674.1 118468603 4532383 3439442..3440194 1 NC_008596.1 identified by match to protein family HMM PF00106; short-chain dehydrogenase/reductase SDR 3440194 4532383 MSMEG_3367 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase SDR YP_887674.1 3439442 D 246196 CDS YP_887675.1 118469096 4535288 complement(3440233..3440370) 1 NC_008596.1 hypothetical protein 3440370 4535288 MSMEG_3368 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887675.1 3440233 R 246196 CDS YP_887676.1 118472425 4532042 3440359..3441657 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; transporter 3441657 4532042 MSMEG_3369 Mycobacterium smegmatis str. MC2 155 transporter YP_887676.1 3440359 D 246196 CDS YP_887677.1 118468027 4531384 3441702..3441911 1 NC_008596.1 hypothetical protein 3441911 4531384 MSMEG_3370 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887677.1 3441702 D 246196 CDS YP_887678.1 118470507 4537560 complement(3442809..3443147) 1 NC_008596.1 identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 3443147 4537560 MSMEG_3372 Mycobacterium smegmatis str. MC2 155 ArsR family transcriptional regulator YP_887678.1 3442809 R 246196 CDS YP_887679.1 118471685 4536447 3443225..3444496 1 NC_008596.1 identified by match to protein family HMM PF07690; major facilitator superfamily protein 3444496 4536447 MSMEG_3373 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_887679.1 3443225 D 246196 CDS YP_887680.1 118470707 4532544 complement(3444504..3445529) 1 NC_008596.1 hypothetical protein 3445529 4532544 MSMEG_3374 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887680.1 3444504 R 246196 CDS YP_887681.1 118467614 4533076 3445911..3447587 1 NC_008596.1 identified by match to protein family HMM PF00732; match to protein family HMM PF05199; alcohol dehydrogenase 3447587 4533076 MSMEG_3375 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_887681.1 3445911 D 246196 CDS YP_887682.1 118468512 4535493 3447605..3448519 1 NC_008596.1 identified by match to protein family HMM PF00753; beta-lactamase 3448519 4535493 MSMEG_3376 Mycobacterium smegmatis str. MC2 155 beta-lactamase YP_887682.1 3447605 D 246196 CDS YP_887683.1 118472097 4537478 complement(3448679..3449362) 1 NC_008596.1 hypothetical protein 3449362 4537478 MSMEG_3377 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887683.1 3448679 R 246196 CDS YP_887684.1 118471120 4533479 3450104..3450889 1 NC_008596.1 identified by match to protein family HMM PF00106; 2-deoxy-D-gluconate 3-dehydrogenase 3450889 4533479 MSMEG_3379 Mycobacterium smegmatis str. MC2 155 2-deoxy-D-gluconate 3-dehydrogenase YP_887684.1 3450104 D 246196 CDS YP_887685.1 118472409 4531330 complement(3450886..3452058) 1 NC_008596.1 identified by match to protein family HMM PF00144; beta-lactamase 3452058 4531330 MSMEG_3378 Mycobacterium smegmatis str. MC2 155 beta-lactamase YP_887685.1 3450886 R 246196 CDS YP_887686.1 118470701 4532538 3452237..3452626 1 NC_008596.1 identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 3452626 4532538 MSMEG_3380 Mycobacterium smegmatis str. MC2 155 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_887686.1 3452237 D 246196 CDS YP_887687.1 118469397 4532291 complement(3452634..3453251) 1 NC_008596.1 identified by match to protein family HMM PF02525; ACP phosphodieterase 3453251 4532291 MSMEG_3381 Mycobacterium smegmatis str. MC2 155 ACP phosphodieterase YP_887687.1 3452634 R 246196 CDS YP_887688.1 118472167 4535693 3453339..3453689 1 NC_008596.1 identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 3453689 4535693 MSMEG_3382 Mycobacterium smegmatis str. MC2 155 ArsR family transcriptional regulator YP_887688.1 3453339 D 246196 CDS YP_887689.1 118469020 4530871 complement(3453838..3453984) 1 NC_008596.1 hypothetical protein 3453984 4530871 MSMEG_3383 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887689.1 3453838 R 246196 CDS YP_887690.1 118470396 4533457 complement(3454069..3454998) 1 NC_008596.1 identified by match to protein family HMM PF05368; isoflavone reductase 3454998 4533457 MSMEG_3384 Mycobacterium smegmatis str. MC2 155 isoflavone reductase YP_887690.1 3454069 R 246196 CDS YP_887691.1 118470043 4534587 complement(3454995..3455480) 1 NC_008596.1 hypothetical protein 3455480 4534587 MSMEG_3385 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887691.1 3454995 R 246196 CDS YP_887692.1 118471813 4536306 complement(3455477..3456817) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; shikimate transporter 3456817 4536306 MSMEG_3386 Mycobacterium smegmatis str. MC2 155 shikimate transporter YP_887692.1 3455477 R 246196 CDS YP_887693.1 118471466 4534385 complement(3456825..3458378) 1 NC_008596.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 3458378 4534385 MSMEG_3387 Mycobacterium smegmatis str. MC2 155 aldehyde dehydrogenase YP_887693.1 3456825 R 246196 CDS YP_887694.1 118472939 4531755 complement(3458388..3459635) 1 NC_008596.1 identified by match to protein family HMM PF00107; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3459635 4531755 MSMEG_3388 Mycobacterium smegmatis str. MC2 155 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase YP_887694.1 3458388 R 246196 CDS YP_887695.1 118468624 4535022 3459807..3461426 1 NC_008596.1 identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; acetolactate synthase 3461426 4535022 MSMEG_3389 Mycobacterium smegmatis str. MC2 155 acetolactate synthase YP_887695.1 3459807 D 246196 CDS YP_887696.1 118470070 4535963 3461441..3462214 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase 3462214 4535963 MSMEG_3390 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_887696.1 3461441 D 246196 CDS YP_887697.1 118471415 4532798 3462268..3463464 1 NC_008596.1 identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F 3463464 4532798 MSMEG_3391 Mycobacterium smegmatis str. MC2 155 L-carnitine dehydratase/bile acid-inducible protein F YP_887697.1 3462268 D 246196 CDS YP_887698.1 118473821 4531631 3463461..3464594 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 3464594 4531631 MSMEG_3392 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_887698.1 3463461 D 246196 CDS YP_887699.1 118471151 4530941 3464591..3465574 1 NC_008596.1 identified by match to protein family HMM PF00441; acyl-CoA dehydrogenase 3465574 4530941 MSMEG_3393 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_887699.1 3464591 D 246196 CDS YP_887700.1 118471010 4533503 3465586..3466005 1 NC_008596.1 identified by match to protein family HMM PF07883; cupin 3466005 4533503 MSMEG_3394 Mycobacterium smegmatis str. MC2 155 cupin YP_887700.1 3465586 D 246196 CDS YP_887701.1 118471833 4536287 3466032..3466808 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 3466808 4536287 MSMEG_3395 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_887701.1 3466032 D 246196 CDS YP_887702.1 118469193 4535782 complement(3466818..3467594) 1 NC_008596.1 identified by match to protein family HMM PF01614; IclR family transcriptional regulator 3467594 4535782 MSMEG_3396 Mycobacterium smegmatis str. MC2 155 IclR family transcriptional regulator YP_887702.1 3466818 R 246196 CDS YP_887703.1 118468152 4532695 complement(3467633..3468964) 1 NC_008596.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 3468964 4532695 MSMEG_3397 Mycobacterium smegmatis str. MC2 155 acetylornithine deacetylase YP_887703.1 3467633 R 246196 CDS YP_887704.1 118473708 4533256 complement(3469021..3470343) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; integral membrane transporter 3470343 4533256 MSMEG_3398 Mycobacterium smegmatis str. MC2 155 integral membrane transporter YP_887704.1 3469021 R 246196 CDS YP_887705.1 118467846 4535473 3471648..3473846 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF01425; match to protein family HMM PF07729; glutamyl-tRNA(Gln) amidotransferase subunit A 3473846 4535473 MSMEG_3400 Mycobacterium smegmatis str. MC2 155 glutamyl-tRNA(Gln) amidotransferase subunit A YP_887705.1 3471648 D 246196 CDS YP_887706.1 118473649 4533517 3473843..3474640 1 NC_008596.1 identified by match to protein family HMM PF03746; LamB/YcsF family protein 3474640 4533517 MSMEG_3401 Mycobacterium smegmatis str. MC2 155 LamB/YcsF family protein YP_887706.1 3473843 D 246196 CDS YP_887707.1 118471688 4536450 3474657..3476018 1 NC_008596.1 identified by match to protein family HMM PF02133; cytosine permease 3476018 4536450 MSMEG_3402 Mycobacterium smegmatis str. MC2 155 cytosine permease YP_887707.1 3474657 D 246196 CDS YP_887708.1 118470860 4536792 3476015..3477016 1 NC_008596.1 formamide amidohydrolase; catalyzes the hydrolysis of formamide to formate; formamidase 3477016 amiF 4536792 amiF Mycobacterium smegmatis str. MC2 155 formamidase YP_887708.1 3476015 D 246196 CDS YP_887709.1 118468341 4532092 3477089..3478327 1 NC_008596.1 identified by match to protein family HMM PF01844; HNH endonuclease domain-containing protein 3478327 4532092 MSMEG_3404 Mycobacterium smegmatis str. MC2 155 HNH endonuclease domain-containing protein YP_887709.1 3477089 D 246196 CDS YP_887710.1 118467955 4532066 complement(3478441..3479892) 1 NC_008596.1 identified by match to protein family HMM PF07690; methylenomycin A resistance protein 3479892 4532066 MSMEG_3405 Mycobacterium smegmatis str. MC2 155 methylenomycin A resistance protein YP_887710.1 3478441 R 246196 CDS YP_887711.1 118473861 4533561 3479977..3480570 1 NC_008596.1 TetR family transcriptional regulator 3480570 4533561 MSMEG_3406 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_887711.1 3479977 D 246196 CDS YP_887712.1 118472004 4533605 complement(3480577..3481794) 1 NC_008596.1 identified by match to protein family HMM PF00561; match to protein family HMM PF06441; epoxide hydrolase 3481794 4533605 MSMEG_3407 Mycobacterium smegmatis str. MC2 155 epoxide hydrolase YP_887712.1 3480577 R 246196 CDS YP_887713.1 118471427 4532810 3481863..3482456 1 NC_008596.1 identified by match to protein family HMM PF07336; hypothetical protein 3482456 4532810 MSMEG_3408 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887713.1 3481863 D 246196 CDS YP_887714.1 118469343 4533166 complement(3482577..3483530) 1 NC_008596.1 identified by match to protein family HMM PF00107; oxidoreductase 3483530 4533166 MSMEG_3409 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_887714.1 3482577 R 246196 CDS YP_887715.1 118472726 4532354 complement(3483534..3484115) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3484115 4532354 MSMEG_3410 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_887715.1 3483534 R 246196 CDS YP_887716.1 118473641 4533509 3484243..3484680 1 NC_008596.1 identified by match to protein family HMM PF03473; MOSC domain-containing protein 3484680 4533509 MSMEG_3411 Mycobacterium smegmatis str. MC2 155 MOSC domain-containing protein YP_887716.1 3484243 D 246196 CDS YP_887717.1 118468441 4536889 complement(3484684..3485550) 1 NC_008596.1 identified by match to protein family HMM PF01522; polysaccharide deacetylase 3485550 4536889 MSMEG_3412 Mycobacterium smegmatis str. MC2 155 polysaccharide deacetylase YP_887717.1 3484684 R 246196 CDS YP_887718.1 118470770 4531133 complement(3486061..3487176) 1 NC_008596.1 hypothetical protein 3487176 4531133 MSMEG_3414 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887718.1 3486061 R 246196 CDS YP_887719.1 118473110 4531836 3487270..3487755 1 NC_008596.1 identified by match to protein family HMM PF01047; match to protein family HMM PF01978; MarR family transcriptional regulator 3487755 4531836 MSMEG_3415 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_887719.1 3487270 D 246196 CDS YP_887720.1 118471586 4534448 3487878..3488744 1 NC_008596.1 identified by match to protein family HMM PF00892; hypothetical protein 3488744 4534448 MSMEG_3416 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887720.1 3487878 D 246196 CDS YP_887721.1 118472259 4531568 complement(3488769..3489272) 1 NC_008596.1 hypothetical protein 3489272 4531568 MSMEG_3417 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887721.1 3488769 R 246196 CDS YP_887722.1 118471232 4534419 complement(3489356..3489784) 1 NC_008596.1 hypothetical protein 3489784 4534419 MSMEG_3418 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887722.1 3489356 R 246196 CDS YP_887723.1 118471330 4534843 complement(3489877..3490839) 1 NC_008596.1 hypothetical protein 3490839 4534843 MSMEG_3419 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887723.1 3489877 R 246196 CDS YP_887724.1 118473818 4531628 complement(3491197..3491967) 1 NC_008596.1 identified by match to protein family HMM PF00106; gluconate 5-dehydrogenase 3491967 4531628 MSMEG_3420 Mycobacterium smegmatis str. MC2 155 gluconate 5-dehydrogenase YP_887724.1 3491197 R 246196 CDS YP_887725.1 118472750 4531939 complement(3491964..3493388) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; inner membrane metabolite transporter YdfJ 3493388 4531939 MSMEG_3421 Mycobacterium smegmatis str. MC2 155 inner membrane metabolite transporter YdfJ YP_887725.1 3491964 R 246196 CDS YP_887726.1 118470494 4537178 3493671..3494702 1 NC_008596.1 identified by match to protein family HMM PF00899; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase 3494702 4537178 MSMEG_3422 Mycobacterium smegmatis str. MC2 155 D-isomer specific 2-hydroxyacid dehydrogenase YP_887726.1 3493671 D 246196 CDS YP_887727.1 118469804 4535945 3494759..3495541 1 NC_008596.1 identified by match to protein family HMM PF01614; IclR family protein regulator 3495541 4535945 MSMEG_3423 Mycobacterium smegmatis str. MC2 155 IclR family protein regulator YP_887727.1 3494759 D 246196 CDS YP_887728.1 118471562 4532210 3495569..3496423 1 NC_008596.1 identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027; MerR family transcriptional regulator 3496423 4532210 MSMEG_3424 Mycobacterium smegmatis str. MC2 155 MerR family transcriptional regulator YP_887728.1 3495569 D 246196 CDS YP_887729.1 118469902 4533221 complement(3496425..3497039) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3497039 4533221 MSMEG_3425 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_887729.1 3496425 R 246196 CDS YP_887730.1 118472291 4532763 complement(3497064..3497915) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase 3497915 4532763 MSMEG_3426 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_887730.1 3497064 R 246196 CDS YP_887731.1 118469175 4534282 3498088..3499005 1 NC_008596.1 identified by match to protein family HMM PF00753; metal dependent hydrolase 3499005 4534282 MSMEG_3427 Mycobacterium smegmatis str. MC2 155 metal dependent hydrolase YP_887731.1 3498088 D 246196 CDS YP_887732.1 118470229 4533920 3499056..3499430 1 NC_008596.1 hypothetical protein 3499430 4533920 MSMEG_3428 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887732.1 3499056 D 246196 CDS YP_887733.1 118469062 4537248 3499988..3501115 1 NC_008596.1 identified by match to protein family HMM PF01757; O-acyl transferase 3501115 4537248 MSMEG_3429 Mycobacterium smegmatis str. MC2 155 O-acyl transferase YP_887733.1 3499988 D 246196 CDS YP_887734.1 118472042 4535387 3501227..3501832 1 NC_008596.1 SAM-dependent methyltransferase 3501832 4535387 MSMEG_3430 Mycobacterium smegmatis str. MC2 155 SAM-dependent methyltransferase YP_887734.1 3501227 D 246196 CDS YP_887735.1 118470529 4536121 complement(3501834..3502136) 1 NC_008596.1 identified by match to protein family HMM PF05199; choline dehydrogenase 3502136 4536121 MSMEG_3431 Mycobacterium smegmatis str. MC2 155 choline dehydrogenase YP_887735.1 3501834 R 246196 CDS YP_887736.1 118469583 4531457 3502304..3503770 1 NC_008596.1 identified by similarity to GP:2935133; match to protein family HMM PF01609; IS1549, transposase 3503770 4531457 MSMEG_3433 Mycobacterium smegmatis str. MC2 155 IS1549, transposase YP_887736.1 3502304 D 246196 CDS YP_887737.1 118470753 4533656 complement(3503726..3505195) 1 NC_008596.1 identified by match to protein family HMM PF00732; choline dehydrogenase 3505195 4533656 MSMEG_3432 Mycobacterium smegmatis str. MC2 155 choline dehydrogenase YP_887737.1 3503726 R 246196 CDS YP_887738.1 118472768 4531859 3505505..3506134 1 NC_008596.1 identified by match to protein family HMM PF00254; peptidyl-prolyl cis-trans isomerase domain-containing protein 3506134 4531859 MSMEG_3434 Mycobacterium smegmatis str. MC2 155 peptidyl-prolyl cis-trans isomerase domain-containing protein YP_887738.1 3505505 D 246196 CDS YP_887739.1 118468220 4537034 3506198..3506590 1 NC_008596.1 hypothetical protein 3506590 4537034 MSMEG_3435 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887739.1 3506198 D 246196 CDS YP_887740.1 118469358 4533182 3506616..3507194 1 NC_008596.1 hypothetical protein 3507194 4533182 MSMEG_3436 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887740.1 3506616 D 246196 CDS YP_887741.1 118472135 4532472 complement(3507206..3508558) 1 NC_008596.1 identified by match to protein family HMM PF00756; match to protein family HMM PF01476; esterase 3508558 4532472 MSMEG_3437 Mycobacterium smegmatis str. MC2 155 esterase YP_887741.1 3507206 R 246196 CDS YP_887742.1 118473910 4536976 complement(3508887..3509057) 1 NC_008596.1 hypothetical protein 3509057 4536976 MSMEG_3438 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887742.1 3508887 R 246196 CDS YP_887743.1 118471033 4536735 3508893..3509048 1 NC_008596.1 hypothetical protein 3509048 4536735 MSMEG_3439 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887743.1 3508893 D 246196 CDS YP_887744.1 118471025 4534481 3509255..3510631 1 NC_008596.1 identified by similarity to SP:P16095; match to protein family HMM PF03313; match to protein family HMM PF03315; match to protein family HMM TIGR00720; L-serine ammonia-lyase 3510631 sdaA 4534481 sdaA Mycobacterium smegmatis str. MC2 155 L-serine ammonia-lyase YP_887744.1 3509255 D 246196 CDS YP_887745.1 118471991 4536138 complement(3510665..3511171) 1 NC_008596.1 hypothetical protein 3511171 4536138 MSMEG_3441 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887745.1 3510665 R 246196 CDS YP_887746.1 118473096 4531157 3511367..3512173 1 NC_008596.1 identified by match to protein family HMM PF00497; cyclohexadienyl dehydratase 3512173 4531157 MSMEG_3442 Mycobacterium smegmatis str. MC2 155 cyclohexadienyl dehydratase YP_887746.1 3511367 D 246196 CDS YP_887747.1 118473992 4531436 3512255..3512413 1 NC_008596.1 hypothetical protein 3512413 4531436 MSMEG_3443 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887747.1 3512255 D 246196 CDS YP_887748.1 118469626 4534084 complement(3512435..3513934) 1 NC_008596.1 identified by match to protein family HMM PF00732; match to protein family HMM PF05199; choline dehydrogenase 3513934 4534084 MSMEG_3444 Mycobacterium smegmatis str. MC2 155 choline dehydrogenase YP_887748.1 3512435 R 246196 CDS YP_887749.1 118470412 4534185 3514040..3515053 1 NC_008596.1 identified by match to protein family HMM PF00296; 5,10-methylenetetrahydromethanopterin reductase 3515053 4534185 MSMEG_3445 Mycobacterium smegmatis str. MC2 155 5,10-methylenetetrahydromethanopterin reductase YP_887749.1 3514040 D 246196 CDS YP_887750.1 118467973 4535155 3515287..3515433 1 NC_008596.1 hypothetical protein 3515433 4535155 MSMEG_3446 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887750.1 3515287 D 246196 CDS YP_887751.1 118472333 4534224 3515585..3516229 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; two-component system response regulator 3516229 4534224 MSMEG_3447 Mycobacterium smegmatis str. MC2 155 two-component system response regulator YP_887751.1 3515585 D 246196 CDS YP_887752.1 118467636 4534211 complement(3516234..3517415) 1 NC_008596.1 identified by match to protein family HMM PF02518; match to protein family HMM PF07730; two-component system sensor kinase 3517415 4534211 MSMEG_3448 Mycobacterium smegmatis str. MC2 155 two-component system sensor kinase YP_887752.1 3516234 R 246196 CDS YP_887753.1 118468615 4535013 complement(3517620..3518267) 1 NC_008596.1 DNA-binding protein 3518267 4535013 MSMEG_3449 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_887753.1 3517620 R 246196 CDS YP_887754.1 118473810 4531620 3518377..3519072 1 NC_008596.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01428; match to protein family HMM TIGR01493; haloacid dehalogenase 3519072 dehII 4531620 dehII Mycobacterium smegmatis str. MC2 155 haloacid dehalogenase YP_887754.1 3518377 D 246196 CDS YP_887755.1 118473050 4533203 complement(3519095..3519946) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short-chain dehydrogenase/reductase 3519946 4533203 MSMEG_3451 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase YP_887755.1 3519095 R 246196 CDS YP_887756.1 118468292 4533050 3520041..3520619 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3520619 4533050 MSMEG_3452 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_887756.1 3520041 D 246196 CDS YP_887757.1 118467349 4534708 3520758..3521030 1 NC_008596.1 hypothetical protein 3521030 4534708 MSMEG_3454 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887757.1 3520758 D 246196 CDS YP_887758.1 118468957 4532620 complement(3521023..3521151) 1 NC_008596.1 hypothetical protein 3521151 4532620 MSMEG_3453 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887758.1 3521023 R 246196 CDS YP_887759.1 118469288 4532627 3521165..3521548 1 NC_008596.1 identified by match to protein family HMM PF01479; heat shock protein 15 3521548 hslR 4532627 hslR Mycobacterium smegmatis str. MC2 155 heat shock protein 15 YP_887759.1 3521165 D 246196 CDS YP_887760.1 118468355 4533954 complement(3521554..3521997) 1 NC_008596.1 hydroxylaminobenzene mutase 3521997 4533954 MSMEG_3456 Mycobacterium smegmatis str. MC2 155 hydroxylaminobenzene mutase YP_887760.1 3521554 R 246196 CDS YP_887761.1 118467373 4534058 complement(3522131..3523492) 1 NC_008596.1 identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992; DoxD family protein/pyridine nucleotide-disulfide oxidoreductase 3523492 4534058 MSMEG_3457 Mycobacterium smegmatis str. MC2 155 DoxD family protein/pyridine nucleotide-disulfide oxidoreductase YP_887761.1 3522131 R 246196 CDS YP_887762.1 118469468 4535731 complement(3523559..3524395) 1 NC_008596.1 hypothetical protein 3524395 4535731 MSMEG_3458 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887762.1 3523559 R 246196 CDS YP_887763.1 118473434 4534125 complement(3524499..3526022) 1 NC_008596.1 identified by match to protein family HMM PF06738; hypothetical protein 3526022 4534125 MSMEG_3459 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887763.1 3524499 R 246196 CDS YP_887764.1 118472658 4535078 3526436..3526876 1 NC_008596.1 identified by match to protein family HMM PF01475; ferric uptake regulation protein 3526876 4535078 MSMEG_3460 Mycobacterium smegmatis str. MC2 155 ferric uptake regulation protein YP_887764.1 3526436 D 246196 CDS YP_887765.1 118471704 4536428 3526916..3529162 1 NC_008596.1 identified by match to protein family HMM PF00141; match to protein family HMM TIGR00198; catalase/peroxidase HPI 3529162 katG 4536428 katG Mycobacterium smegmatis str. MC2 155 catalase/peroxidase HPI YP_887765.1 3526916 D 246196 CDS YP_887766.1 118473579 4531013 3529328..3529993 1 NC_008596.1 identified by match to protein family HMM PF00881; oxidoreductase 3529993 4531013 MSMEG_3462 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_887766.1 3529328 D 246196 CDS YP_887767.1 118468748 4534237 complement(3529999..3530907) 1 NC_008596.1 esterase 3530907 4534237 MSMEG_3463 Mycobacterium smegmatis str. MC2 155 esterase YP_887767.1 3529999 R 246196 CDS YP_887768.1 118470304 4533362 complement(3531027..3532043) 1 NC_008596.1 identified by match to protein family HMM PF00107; alcohol dehydrogenase 3532043 4533362 MSMEG_3464 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_887768.1 3531027 R 246196 CDS YP_887769.1 118472159 4535685 complement(3532122..3533981) 1 NC_008596.1 activates fatty acids by binding to coenzyme A; fatty-acid--CoA ligase 3533981 4535685 MSMEG_3465 Mycobacterium smegmatis str. MC2 155 fatty-acid--CoA ligase YP_887769.1 3532122 R 246196 CDS YP_887770.1 118467425 4536041 complement(3534056..3534223) 1 NC_008596.1 hypothetical protein 3534223 4536041 MSMEG_3466 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887770.1 3534056 R 246196 CDS YP_887771.1 118473241 4537301 3534240..3535796 1 NC_008596.1 identified by match to protein family HMM PF00501; AMP-binding protein 3535796 4537301 MSMEG_3468 Mycobacterium smegmatis str. MC2 155 AMP-binding protein YP_887771.1 3534240 D 246196 CDS YP_887772.1 118468405 4534547 complement(3535783..3536193) 1 NC_008596.1 hypothetical protein 3536193 4534547 MSMEG_3467 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887772.1 3535783 R 246196 CDS YP_887773.1 118473355 4530831 complement(3536190..3536777) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3536777 4530831 MSMEG_3469 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_887773.1 3536190 R 246196 CDS YP_887774.1 118472428 4532045 3536879..3537790 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase 3537790 4532045 MSMEG_3470 Mycobacterium smegmatis str. MC2 155 NAD-dependent epimerase/dehydratase YP_887774.1 3536879 D 246196 CDS YP_887775.1 118470618 4532976 3537873..3539153 1 NC_008596.1 hypothetical protein 3539153 4532976 MSMEG_3471 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887775.1 3537873 D 246196 CDS YP_887776.1 118468263 4533996 3539153..3540352 1 NC_008596.1 identified by match to protein family HMM PF07958; hypothetical protein 3540352 4533996 MSMEG_3472 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887776.1 3539153 D 246196 CDS YP_887777.1 118469717 4537591 3540363..3540992 1 NC_008596.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01091; uracil phosphoribosyltransferase 3540992 upp 4537591 upp Mycobacterium smegmatis str. MC2 155 uracil phosphoribosyltransferase YP_887777.1 3540363 D 246196 CDS YP_887778.1 118470433 4532224 3541055..3541705 1 NC_008596.1 identified by match to protein family HMM PF02517; integral membrane protein 3541705 4532224 MSMEG_3474 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_887778.1 3541055 D 246196 CDS YP_887779.1 118470115 4534950 complement(3541709..3542491) 1 NC_008596.1 hypothetical protein 3542491 4534950 MSMEG_3475 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887779.1 3541709 R 246196 CDS YP_887780.1 118472713 4531681 complement(3542549..3543670) 1 NC_008596.1 identified by match to protein family HMM PF01435; peptidase, M48 family protein 3543670 4531681 MSMEG_3476 Mycobacterium smegmatis str. MC2 155 peptidase, M48 family protein YP_887780.1 3542549 R 246196 CDS YP_887781.1 118468647 4533579 complement(3543755..3544417) 1 NC_008596.1 identified by match to protein family HMM PF00877; inv protein 3544417 4533579 MSMEG_3477 Mycobacterium smegmatis str. MC2 155 inv protein YP_887781.1 3543755 R 246196 CDS YP_887782.1 118473000 4531292 3544716..3545447 1 NC_008596.1 identified by match to protein family HMM PF03070; tena/thi-4 family protein 3545447 4531292 MSMEG_3478 Mycobacterium smegmatis str. MC2 155 tena/thi-4 family protein YP_887782.1 3544716 D 246196 CDS YP_887783.1 118472640 4537659 complement(3545574..3546068) 1 NC_008596.1 antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 3546068 tpx 4537659 tpx Mycobacterium smegmatis str. MC2 155 thiol peroxidase YP_887783.1 3545574 R 246196 CDS YP_887784.1 118467732 4534015 3546179..3547108 1 NC_008596.1 identified by match to protein family HMM PF04655; streptomycin 6-kinase 3547108 4534015 MSMEG_3480 Mycobacterium smegmatis str. MC2 155 streptomycin 6-kinase YP_887784.1 3546179 D 246196 CDS YP_887785.1 118469579 4531453 complement(3547122..3548174) 1 NC_008596.1 identified by match to protein family HMM PF01188; O-succinylbenzoate synthase 3548174 4531453 MSMEG_3481 Mycobacterium smegmatis str. MC2 155 O-succinylbenzoate synthase YP_887785.1 3547122 R 246196 CDS YP_887786.1 118471004 4533497 3548221..3548475 1 NC_008596.1 hypothetical protein 3548475 4533497 MSMEG_3482 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887786.1 3548221 D 246196 CDS YP_887787.1 118471856 4536271 3548528..3549193 1 NC_008596.1 identified by match to protein family HMM PF03473; mosc domain-containing protein 3549193 4536271 MSMEG_3483 Mycobacterium smegmatis str. MC2 155 mosc domain-containing protein YP_887787.1 3548528 D 246196 CDS YP_887788.1 118469925 4535836 complement(3549195..3549722) 1 NC_008596.1 identified by match to protein family HMM PF07883; cupin 3549722 4535836 MSMEG_3484 Mycobacterium smegmatis str. MC2 155 cupin YP_887788.1 3549195 R 246196 CDS YP_887789.1 118469190 4535779 complement(3549755..3550351) 1 NC_008596.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; ECF sigma factor RpoE1 3550351 4535779 MSMEG_3485 Mycobacterium smegmatis str. MC2 155 ECF sigma factor RpoE1 YP_887789.1 3549755 R 246196 CDS YP_887790.1 118473932 4537370 complement(3550348..3551805) 1 NC_008596.1 identified by similarity to SP:P26901; match to protein family HMM PF00199; catalase KatA 3551805 katA 4537370 katA Mycobacterium smegmatis str. MC2 155 catalase KatA YP_887790.1 3550348 R 246196 CDS YP_887791.1 118467682 4537320 complement(3551822..3552478) 1 NC_008596.1 identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; metal-dependent phosphohydrolase 3552478 4537320 MSMEG_3487 Mycobacterium smegmatis str. MC2 155 metal-dependent phosphohydrolase YP_887791.1 3551822 R 246196 CDS YP_887792.1 118470072 4535965 3552713..3553684 1 NC_008596.1 identified by match to protein family HMM PF00165; match to protein family HMM PF01965; AraC family transcriptional regulator 3553684 4535965 MSMEG_3488 Mycobacterium smegmatis str. MC2 155 AraC family transcriptional regulator YP_887792.1 3552713 D 246196 CDS YP_887793.1 118472079 4537088 complement(3553689..3554375) 1 NC_008596.1 identified by match to protein family HMM PF00657; hypothetical protein 3554375 4537088 MSMEG_3489 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887793.1 3553689 R 246196 CDS YP_887794.1 118468986 4535096 complement(3554508..3555722) 1 NC_008596.1 identified by match to protein family HMM PF01757; membrane acyltransferase 3555722 4535096 MSMEG_3490 Mycobacterium smegmatis str. MC2 155 membrane acyltransferase YP_887794.1 3554508 R 246196 CDS YP_887795.1 118471492 4536831 complement(3556086..3556586) 1 NC_008596.1 hypothetical protein 3556586 4536831 MSMEG_3491 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887795.1 3556086 R 246196 CDS YP_887796.1 118472294 4532766 3556736..3557890 1 NC_008596.1 identified by match to protein family HMM PF01663; phosphodiesterase 3557890 4532766 MSMEG_3492 Mycobacterium smegmatis str. MC2 155 phosphodiesterase YP_887796.1 3556736 D 246196 CDS YP_887797.1 118467680 4536946 3557926..3558267 1 NC_008596.1 identified by match to protein family HMM PF05305; hypothetical protein 3558267 4536946 MSMEG_3493 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887797.1 3557926 D 246196 CDS YP_887798.1 118468428 4535586 3558309..3558770 1 NC_008596.1 hypothetical protein 3558770 4535586 MSMEG_3494 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887798.1 3558309 D 246196 CDS YP_887799.1 118470714 4533929 3559120..3559596 1 NC_008596.1 identified by match to protein family HMM PF05423; MmpS5 protein 3559596 4533929 MSMEG_3495 Mycobacterium smegmatis str. MC2 155 MmpS5 protein YP_887799.1 3559120 D 246196 CDS YP_887800.1 118467934 4533413 3559593..3562502 1 NC_008596.1 identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; MmpL4 protein 3562502 4533413 MSMEG_3496 Mycobacterium smegmatis str. MC2 155 MmpL4 protein YP_887800.1 3559593 D 246196 CDS YP_887801.1 118468590 4532717 complement(3562524..3563264) 1 NC_008596.1 ArsR family transcriptional regulator 3563264 4532717 MSMEG_3497 Mycobacterium smegmatis str. MC2 155 ArsR family transcriptional regulator YP_887801.1 3562524 R 246196 CDS YP_887802.1 118471347 4533231 3563614..3563733 1 NC_008596.1 hypothetical protein 3563733 4533231 MSMEG_3498 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887802.1 3563614 D 246196 CDS YP_887803.1 118472667 4535087 3563799..3564401 1 NC_008596.1 hypothetical protein 3564401 4535087 MSMEG_3499 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887803.1 3563799 D 246196 CDS YP_887804.1 118471325 4534838 3564453..3565199 1 NC_008596.1 identified by match to protein family HMM PF03883; hypothetical protein 3565199 4534838 MSMEG_3500 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887804.1 3564453 D 246196 CDS YP_887805.1 118472285 4534811 complement(3565323..3565700) 1 NC_008596.1 hypothetical protein 3565700 4534811 MSMEG_3501 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887805.1 3565323 R 246196 CDS YP_887806.1 118473899 4536594 3565749..3565904 1 NC_008596.1 hypothetical protein 3565904 4536594 MSMEG_3502 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887806.1 3565749 D 246196 CDS YP_887807.1 118472201 4530859 3566211..3566756 1 NC_008596.1 hypothetical protein 3566756 4530859 MSMEG_3503 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887807.1 3566211 D 246196 CDS YP_887808.1 118473961 4533032 3566848..3567099 1 NC_008596.1 hypothetical protein 3567099 4533032 MSMEG_3504 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887808.1 3566848 D 246196 CDS YP_887809.1 118468189 4534403 3567077..3568549 1 NC_008596.1 identified by match to protein family HMM PF01425; 6-aminohexanoate-cyclic-dimer hydrolase 3568549 4534403 MSMEG_3505 Mycobacterium smegmatis str. MC2 155 6-aminohexanoate-cyclic-dimer hydrolase YP_887809.1 3567077 D 246196 CDS YP_887810.1 118472014 4533615 3568572..3569969 1 NC_008596.1 identified by match to protein family HMM PF00282; match to protein family HMM PF01212; amino acid decarboxylase 3569969 4533615 MSMEG_3506 Mycobacterium smegmatis str. MC2 155 amino acid decarboxylase YP_887810.1 3568572 D 246196 CDS YP_887811.1 118471177 4534963 3570092..3570985 1 NC_008596.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; fructose-1,6-bisphosphate aldolase 3570985 4534963 MSMEG_3507 Mycobacterium smegmatis str. MC2 155 fructose-1,6-bisphosphate aldolase YP_887811.1 3570092 D 246196 CDS YP_887812.1 118469268 4532238 3571016..3571939 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 3571939 4532238 MSMEG_3508 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_887812.1 3571016 D 246196 CDS YP_887813.1 118471000 4533493 3572011..3572664 1 NC_008596.1 hypothetical protein 3572664 4533493 MSMEG_3509 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887813.1 3572011 D 246196 CDS YP_887814.1 118472542 4532669 3572774..3574159 1 NC_008596.1 identified by match to protein family HMM PF01494; hydroxylase 3574159 4532669 MSMEG_3511 Mycobacterium smegmatis str. MC2 155 hydroxylase YP_887814.1 3572774 D 246196 CDS YP_887815.1 118473262 4537692 complement(3574156..3575241) 1 NC_008596.1 identified by similarity to GB:CAD18826.1; ISMsm2, transposase 3575241 4537692 MSMEG_3510 Mycobacterium smegmatis str. MC2 155 ISMsm2, transposase YP_887815.1 3574156 R 246196 CDS YP_887816.1 118468874 4533759 complement(3575284..3576576) 1 NC_008596.1 identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; competence damage-inducible protein A 3576576 4533759 MSMEG_3512 Mycobacterium smegmatis str. MC2 155 competence damage-inducible protein A YP_887816.1 3575284 R 246196 CDS YP_887817.1 118473462 4534906 complement(3576626..3577834) 1 NC_008596.1 hypothetical protein 3577834 4534906 MSMEG_3513 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887817.1 3576626 R 246196 CDS YP_887818.1 118469483 4534457 complement(3577888..3578115) 1 NC_008596.1 hypothetical protein 3578115 4534457 MSMEG_3514 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887818.1 3577888 R 246196 CDS YP_887819.1 118473412 4537399 complement(3578173..3578910) 1 NC_008596.1 identified by match to protein family HMM PF00106; 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase 3578910 4537399 MSMEG_3515 Mycobacterium smegmatis str. MC2 155 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase YP_887819.1 3578173 R 246196 CDS YP_887820.1 118471394 4534988 complement(3580099..3580770) 1 NC_008596.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; HAD-superfamily hydrolase 3580770 4534988 MSMEG_3517 Mycobacterium smegmatis str. MC2 155 HAD-superfamily hydrolase YP_887820.1 3580099 R 246196 CDS YP_887821.1 118473195 4533312 3580892..3581272 1 NC_008596.1 hypothetical protein 3581272 4533312 MSMEG_3518 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887821.1 3580892 D 246196 CDS YP_887822.1 118469969 4535743 3581377..3582507 1 NC_008596.1 identified by match to protein family HMM PF03060; oxidoreductase, 2-nitropropane dioxygenase 3582507 4535743 MSMEG_3519 Mycobacterium smegmatis str. MC2 155 oxidoreductase, 2-nitropropane dioxygenase YP_887822.1 3581377 D 246196 CDS YP_887823.1 118468501 4535482 3582635..3583222 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3583222 4535482 MSMEG_3520 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_887823.1 3582635 D 246196 CDS YP_887824.1 118473683 4531080 3583219..3585468 1 NC_008596.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; molybdopterin oxidoreductase 3585468 4531080 MSMEG_3521 Mycobacterium smegmatis str. MC2 155 molybdopterin oxidoreductase YP_887824.1 3583219 D 246196 CDS YP_887825.1 118472984 4532264 complement(3585553..3585981) 1 NC_008596.1 dopamine receptor D4 3585981 4532264 MSMEG_3522 Mycobacterium smegmatis str. MC2 155 dopamine receptor D4 YP_887825.1 3585553 R 246196 CDS YP_887826.1 118472172 4533710 3586215..3587507 1 NC_008596.1 linalool 8-monooxygenase 3587507 4533710 MSMEG_3524 Mycobacterium smegmatis str. MC2 155 linalool 8-monooxygenase YP_887826.1 3586215 D 246196 CDS YP_887827.1 118470094 4532969 complement(3587428..3587847) 1 NC_008596.1 hypothetical protein 3587847 4532969 MSMEG_3523 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887827.1 3587428 R 246196 CDS YP_887828.1 118468652 4535228 3587930..3588706 1 NC_008596.1 identified by match to protein family HMM PF01381; XRE family transcriptional regulator 3588706 4535228 MSMEG_3525 Mycobacterium smegmatis str. MC2 155 XRE family transcriptional regulator YP_887828.1 3587930 D 246196 CDS YP_887829.1 118471571 4534433 3588785..3589417 1 NC_008596.1 identified by match to protein family HMM TIGR01926; hypothetical protein 3589417 4534433 MSMEG_3526 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887829.1 3588785 D 246196 CDS YP_887830.1 118470474 4536783 3589470..3590201 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; HTH-type transcriptional regulator 3590201 4536783 MSMEG_3527 Mycobacterium smegmatis str. MC2 155 HTH-type transcriptional regulator YP_887830.1 3589470 D 246196 CDS YP_887831.1 118468962 4533526 3590198..3590848 1 NC_008596.1 identified by match to protein family HMM PF04116; fatty acid hydroxylase 3590848 4533526 MSMEG_3529 Mycobacterium smegmatis str. MC2 155 fatty acid hydroxylase YP_887831.1 3590198 D 246196 CDS YP_887832.1 118473165 4532567 complement(3590832..3591611) 1 NC_008596.1 identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 3591611 4532567 MSMEG_3528 Mycobacterium smegmatis str. MC2 155 ErfK/YbiS/YcfS/YnhG family protein YP_887832.1 3590832 R 246196 CDS YP_887833.1 118472401 4531811 complement(3591737..3592342) 1 NC_008596.1 hypothetical protein 3592342 4531811 MSMEG_3530 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887833.1 3591737 R 246196 CDS YP_887834.1 118473362 4530838 complement(3592366..3593796) 1 NC_008596.1 hypothetical protein 3593796 4530838 MSMEG_3531 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887834.1 3592366 R 246196 CDS YP_887835.1 118471887 4536263 3593962..3595527 1 NC_008596.1 identified by match to protein family HMM PF00854; match to protein family HMM TIGR00924; di-/tripeptide transporter 3595527 4536263 MSMEG_3533 Mycobacterium smegmatis str. MC2 155 di-/tripeptide transporter YP_887835.1 3593962 D 246196 CDS YP_887836.1 118469099 4535291 complement(3595524..3596474) 1 NC_008596.1 identified by match to protein family HMM PF00291; serine/threonine dehydratase 3596474 4535291 MSMEG_3532 Mycobacterium smegmatis str. MC2 155 serine/threonine dehydratase YP_887836.1 3595524 R 246196 CDS YP_887837.1 118469976 4535750 3596576..3597016 1 NC_008596.1 identified by match to protein family HMM PF03061; 4-hydroxybenzoyl-CoA thioesterase 3597016 4535750 MSMEG_3534 Mycobacterium smegmatis str. MC2 155 4-hydroxybenzoyl-CoA thioesterase YP_887837.1 3596576 D 246196 CDS YP_887838.1 118470943 4533678 3597069..3598112 1 NC_008596.1 identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; agmatinase 3598112 speB 4533678 speB Mycobacterium smegmatis str. MC2 155 agmatinase YP_887838.1 3597069 D 246196 CDS YP_887839.1 118469485 4534459 3598192..3600066 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; sugar transporter 3600066 4534459 MSMEG_3536 Mycobacterium smegmatis str. MC2 155 sugar transporter YP_887839.1 3598192 D 246196 CDS YP_887840.1 118473264 4537694 3600074..3600313 1 NC_008596.1 hypothetical protein 3600313 4537694 MSMEG_3537 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887840.1 3600074 D 246196 CDS YP_887841.1 118470098 4534933 complement(3600326..3601186) 1 NC_008596.1 identified by match to protein family HMM PF02353; cyclopropane-fatty-acyl-phospholipid synthase 3601186 4534933 MSMEG_3538 Mycobacterium smegmatis str. MC2 155 cyclopropane-fatty-acyl-phospholipid synthase YP_887841.1 3600326 R 246196 CDS YP_887842.1 118471857 4536272 3601197..3601316 1 NC_008596.1 hypothetical protein 3601316 4536272 MSMEG_3539 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887842.1 3601197 D 246196 CDS YP_887843.1 118467568 4532858 3601386..3601607 1 NC_008596.1 hypothetical protein 3601607 4532858 MSMEG_3540 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887843.1 3601386 D 246196 CDS YP_887844.1 118473546 4532416 3601604..3601975 1 NC_008596.1 hypothetical protein 3601975 4532416 MSMEG_3542 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887844.1 3601604 D 246196 CDS YP_887845.1 118468248 4537433 complement(3601917..3602810) 1 NC_008596.1 identified by match to protein family HMM PF02683; cytochrome C biogenesis protein transmembrane region 3602810 4537433 MSMEG_3541 Mycobacterium smegmatis str. MC2 155 cytochrome C biogenesis protein transmembrane region YP_887845.1 3601917 R 246196 CDS YP_887846.1 118471517 4537228 complement(3602815..3603345) 1 NC_008596.1 hypothetical protein 3603345 4537228 MSMEG_3543 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887846.1 3602815 R 246196 CDS YP_887847.1 118473424 4537411 complement(3603465..3604370) 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 3604370 4537411 MSMEG_3544 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887847.1 3603465 R 246196 CDS YP_887848.1 118472173 4533711 complement(3604423..3605046) 1 NC_008596.1 hypothetical protein 3605046 4533711 MSMEG_3545 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887848.1 3604423 R 246196 CDS YP_887849.1 118471192 4531486 3605339..3606676 1 NC_008596.1 hypothetical protein 3606676 4531486 MSMEG_3546 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887849.1 3605339 D 246196 CDS YP_887850.1 118470185 4530820 3607110..3607949 1 NC_008596.1 identified by match to protein family HMM PF00497; match to protein family HMM TIGR01409; match to protein family HMM TIGR02995; ectoine/hydroxyectoine ABC transporter solute-binding protein 3607949 ehuB 4530820 ehuB Mycobacterium smegmatis str. MC2 155 ectoine/hydroxyectoine ABC transporter solute-binding protein YP_887850.1 3607110 D 246196 CDS YP_887851.1 118471268 4532142 3607960..3608673 1 NC_008596.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; match to protein family HMM TIGR03004; ectoine/hydroxyectoine ABC transporter permease EhuC 3608673 ehuC 4532142 ehuC Mycobacterium smegmatis str. MC2 155 ectoine/hydroxyectoine ABC transporter permease EhuC YP_887851.1 3607960 D 246196 CDS YP_887852.1 118470385 4532332 3608670..3609350 1 NC_008596.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; match to protein family HMM TIGR03003; ectoine/hydroxyectoine ABC transporter permease EhuD 3609350 ehuD 4532332 ehuD Mycobacterium smegmatis str. MC2 155 ectoine/hydroxyectoine ABC transporter permease EhuD YP_887852.1 3608670 D 246196 CDS YP_887853.1 118471622 4536535 3609381..3610136 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR03005; ectoine/hydroxyectoine ABC transporter ATP-binding protein 3610136 ehuA 4536535 ehuA Mycobacterium smegmatis str. MC2 155 ectoine/hydroxyectoine ABC transporter ATP-binding protein YP_887853.1 3609381 D 246196 CDS YP_887854.1 118467791 4535713 3610192..3611469 1 NC_008596.1 identified by match to protein family HMM PF00067; linalool 8-monooxygenase 3611469 4535713 MSMEG_3551 Mycobacterium smegmatis str. MC2 155 linalool 8-monooxygenase YP_887854.1 3610192 D 246196 CDS YP_887855.1 118470051 4534596 complement(3611488..3612708) 1 NC_008596.1 hypothetical protein 3612708 4534596 MSMEG_3552 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887855.1 3611488 R 246196 CDS YP_887856.1 118467828 4534579 3612964..3614376 1 NC_008596.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase 3614376 hydA 4534579 hydA Mycobacterium smegmatis str. MC2 155 phenylhydantoinase YP_887856.1 3612964 D 246196 CDS YP_887857.1 118469665 4535427 3614417..3615436 1 NC_008596.1 identified by match to protein family HMM PF00296; N5,N10-methylene- tetrahydromethanopterin reductase 3615436 4535427 MSMEG_3554 Mycobacterium smegmatis str. MC2 155 N5,N10-methylene- tetrahydromethanopterin reductase YP_887857.1 3614417 D 246196 CDS YP_887858.1 118473091 4531152 3615464..3616312 1 NC_008596.1 identified by match to protein family HMM PF00795; hydrolase 3616312 4531152 MSMEG_3555 Mycobacterium smegmatis str. MC2 155 hydrolase YP_887858.1 3615464 D 246196 CDS YP_887859.1 118472018 4533619 3616326..3617897 1 NC_008596.1 identified by match to protein family HMM PF02133; integral membrane transporter 3617897 4533619 MSMEG_3556 Mycobacterium smegmatis str. MC2 155 integral membrane transporter YP_887859.1 3616326 D 246196 CDS YP_887860.1 118469283 4532253 complement(3617957..3619402) 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 3619402 4532253 MSMEG_3557 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_887860.1 3617957 R 246196 CDS YP_887861.1 118471898 4536235 complement(3619557..3620492) 1 NC_008596.1 identified by match to protein family HMM PF01738; carboxymethylenebutenolidase 3620492 4536235 MSMEG_3558 Mycobacterium smegmatis str. MC2 155 carboxymethylenebutenolidase YP_887861.1 3619557 R 246196 CDS YP_887862.1 118470916 4537590 3620574..3621500 1 NC_008596.1 short chain dehydrogenase 3621500 4537590 MSMEG_3559 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_887862.1 3620574 D 246196 CDS YP_887863.1 118468492 4537681 complement(3621505..3621867) 1 NC_008596.1 hypothetical protein 3621867 4537681 MSMEG_3560 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887863.1 3621505 R 246196 CDS YP_887864.1 118471230 4534417 complement(3621908..3623269) 1 NC_008596.1 identified by match to protein family HMM PF00120; glutamine synthetase 3623269 glnA 4534417 glnA Mycobacterium smegmatis str. MC2 155 glutamine synthetase YP_887864.1 3621908 R 246196 CDS YP_887865.1 118473147 4532588 complement(3623312..3623794) 1 NC_008596.1 identified by match to protein family HMM PF02627; hypothetical protein 3623794 pcaC 4532588 pcaC Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887865.1 3623312 R 246196 CDS YP_887866.1 118471119 4533478 complement(3623967..3626027) 1 NC_008596.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; drug transporter 3626027 4533478 MSMEG_3563 Mycobacterium smegmatis str. MC2 155 drug transporter YP_887866.1 3623967 R 246196 CDS YP_887867.1 118468145 4532688 complement(3626184..3626669) 1 NC_008596.1 identified by match to protein family HMM PF00210; match to protein family HMM TIGR00754; bacterioferritin 3626669 bfr 4532688 bfr Mycobacterium smegmatis str. MC2 155 bacterioferritin YP_887867.1 3626184 R 246196 CDS YP_887868.1 118469493 4534467 complement(3626894..3627010) 1 NC_008596.1 hypothetical protein 3627010 4534467 MSMEG_3565 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887868.1 3626894 R 246196 CDS YP_887869.1 118470428 4532219 3626921..3627553 1 NC_008596.1 FadD16 protein 3627553 4532219 MSMEG_3566 Mycobacterium smegmatis str. MC2 155 FadD16 protein YP_887869.1 3626921 D 246196 CDS YP_887870.1 118471838 4536292 3627559..3627768 1 NC_008596.1 identified by match to protein family HMM PF04324; hypothetical protein 3627768 4536292 MSMEG_3568 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887870.1 3627559 D 246196 CDS YP_887871.1 118471028 4534484 complement(3627765..3628532) 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase 3628532 4534484 MSMEG_3567 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_887871.1 3627765 R 246196 CDS YP_887872.1 118472568 4534152 complement(3628592..3629335) 1 NC_008596.1 hypothetical protein 3629335 4534152 MSMEG_3569 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887872.1 3628592 R 246196 CDS YP_887873.1 118473339 4532004 3629411..3631426 1 NC_008596.1 identified by match to protein family HMM PF05976; hypothetical protein 3631426 4532004 MSMEG_3570 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887873.1 3629411 D 246196 CDS YP_887874.1 118472836 4537061 complement(3631442..3632071) 1 NC_008596.1 identified by match to protein family HMM PF03061; thioesterase 3632071 4537061 MSMEG_3571 Mycobacterium smegmatis str. MC2 155 thioesterase YP_887874.1 3631442 R 246196 CDS YP_887875.1 118471341 4533225 3632220..3632795 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3632795 4533225 MSMEG_3572 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_887875.1 3632220 D 246196 CDS YP_887876.1 118469129 4535342 3632831..3633964 1 NC_008596.1 integral membrane protein 3633964 4535342 MSMEG_3573 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_887876.1 3632831 D 246196 CDS YP_887877.1 118471607 4536519 3633987..3635588 1 NC_008596.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721; hypothetical protein 3635588 4536519 MSMEG_3574 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887877.1 3633987 D 246196 CDS YP_887878.1 118470530 4536122 3635643..3636122 1 NC_008596.1 identified by match to protein family HMM PF00383; cytidine/deoxycytidylate deaminase 3636122 4536122 MSMEG_3575 Mycobacterium smegmatis str. MC2 155 cytidine/deoxycytidylate deaminase YP_887878.1 3635643 D 246196 CDS YP_887879.1 118472160 4535686 3636119..3637426 1 NC_008596.1 identified by match to protein family HMM PF00128; alpha-amylase 3637426 4535686 MSMEG_3576 Mycobacterium smegmatis str. MC2 155 alpha-amylase YP_887879.1 3636119 D 246196 CDS YP_887880.1 118470750 4533653 complement(3637429..3637878) 1 NC_008596.1 calpastatin 3637878 4533653 MSMEG_3577 Mycobacterium smegmatis str. MC2 155 calpastatin YP_887880.1 3637429 R 246196 CDS YP_887881.1 118469724 4537598 3638039..3640156 1 NC_008596.1 identified by match to protein family HMM PF00211; match to protein family HMM PF00672; cyclase 3640156 4537598 MSMEG_3578 Mycobacterium smegmatis str. MC2 155 cyclase YP_887881.1 3638039 D 246196 CDS YP_887882.1 118473923 4537361 3640153..3641547 1 NC_008596.1 identified by match to protein family HMM PF00027; match to protein family HMM PF00924; transmembrane protein 3641547 4537361 MSMEG_3579 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_887882.1 3640153 D 246196 CDS YP_887883.1 118467737 4534020 3641776..3642765 1 NC_008596.1 identified by match to protein family HMM PF00756; antigen 85-C 3642765 4534020 MSMEG_3580 Mycobacterium smegmatis str. MC2 155 antigen 85-C YP_887883.1 3641776 D 246196 CDS YP_887884.1 118473321 4530980 complement(3642828..3643589) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; FabG protein 3643589 4530980 MSMEG_3581 Mycobacterium smegmatis str. MC2 155 FabG protein YP_887884.1 3642828 R 246196 CDS YP_887885.1 118467588 4531404 3643729..3646068 1 NC_008596.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07726; match to protein family HMM PF07728; match to protein family HMM TIGR00763; ATP-dependent protease La 3646068 lon 4531404 lon Mycobacterium smegmatis str. MC2 155 ATP-dependent protease La YP_887885.1 3643729 D 246196 CDS YP_887886.1 118471382 4534976 3646220..3647224 1 NC_008596.1 identified by match to protein family HMM PF00296; monooxygenase 3647224 4534976 MSMEG_3583 Mycobacterium smegmatis str. MC2 155 monooxygenase YP_887886.1 3646220 D 246196 CDS YP_887887.1 118471240 4534427 complement(3647366..3650245) 1 NC_008596.1 identified by match to protein family HMM PF03176; membrane protein, MmpL family protein 3650245 4534427 MSMEG_3584 Mycobacterium smegmatis str. MC2 155 membrane protein, MmpL family protein YP_887887.1 3647366 R 246196 CDS YP_887888.1 118473941 4533887 complement(3650224..3650718) 1 NC_008596.1 identified by match to protein family HMM PF05423; MmpS2 protein 3650718 4533887 MSMEG_3585 Mycobacterium smegmatis str. MC2 155 MmpS2 protein YP_887888.1 3650224 R 246196 CDS YP_887889.1 118471186 4531480 complement(3650839..3652161) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family protein transporter 3652161 4531480 MSMEG_3586 Mycobacterium smegmatis str. MC2 155 major facilitator family protein transporter YP_887889.1 3650839 R 246196 CDS YP_887890.1 118473656 4531227 3652441..3653880 1 NC_008596.1 identified by match to protein family HMM PF00324; D-serine/D-alanine/glycine transporter 3653880 4531227 MSMEG_3587 Mycobacterium smegmatis str. MC2 155 D-serine/D-alanine/glycine transporter YP_887890.1 3652441 D 246196 CDS YP_887891.1 118470184 4530819 3653933..3654058 1 NC_008596.1 hypothetical protein 3654058 4530819 MSMEG_3588 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887891.1 3653933 D 246196 CDS YP_887892.1 118470211 4532505 3654084..3654329 1 NC_008596.1 hypothetical protein 3654329 4532505 MSMEG_3589 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887892.1 3654084 D 246196 CDS YP_887893.1 118473088 4533163 3654331..3655206 1 NC_008596.1 hypothetical protein 3655206 4533163 MSMEG_3590 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887893.1 3654331 D 246196 CDS YP_887894.1 118470266 4537158 3655206..3655454 1 NC_008596.1 hypothetical protein 3655454 4537158 MSMEG_3591 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887894.1 3655206 D 246196 CDS YP_887895.1 118471182 4534968 3655466..3656092 1 NC_008596.1 hypothetical protein 3656092 4534968 MSMEG_3592 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887895.1 3655466 D 246196 CDS YP_887896.1 118472849 4537445 3656099..3656827 1 NC_008596.1 identified by match to protein family HMM PF01904; hypothetical protein 3656827 4537445 MSMEG_3593 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887896.1 3656099 D 246196 CDS YP_887897.1 118473572 4531006 3656839..3658068 1 NC_008596.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; anthranilate dioxygenase reductase 3658068 4531006 MSMEG_3594 Mycobacterium smegmatis str. MC2 155 anthranilate dioxygenase reductase YP_887897.1 3656839 D 246196 CDS YP_887898.1 118471577 4534439 3658215..3658883 1 NC_008596.1 hypothetical protein 3658883 4534439 MSMEG_3595 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887898.1 3658215 D 246196 CDS YP_887899.1 118469014 4536065 3658883..3662089 1 NC_008596.1 ATPase 3662089 4536065 MSMEG_3596 Mycobacterium smegmatis str. MC2 155 ATPase YP_887899.1 3658883 D 246196 CDS YP_887900.1 118472801 4533144 3661633..3662124 1 NC_008596.1 hypothetical protein 3662124 4533144 MSMEG_3597 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887900.1 3661633 D 246196 CDS YP_887901.1 118471550 4532198 complement(3662144..3663193) 1 NC_008596.1 identified by match to protein family HMM PF00532; periplasmic sugar-binding proteins 3663193 4532198 MSMEG_3598 Mycobacterium smegmatis str. MC2 155 periplasmic sugar-binding proteins YP_887901.1 3662144 R 246196 CDS YP_887902.1 118472808 4536662 3662792..3663292 1 NC_008596.1 hypothetical protein 3663292 4536662 MSMEG_3600 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887902.1 3662792 D 246196 CDS YP_887903.1 118473749 4537355 complement(3663228..3664277) 1 NC_008596.1 identified by match to protein family HMM PF00532; LacI family transcriptional regulator 3664277 4537355 MSMEG_3599 Mycobacterium smegmatis str. MC2 155 LacI family transcriptional regulator YP_887903.1 3663228 R 246196 CDS YP_887904.1 118470177 4530812 complement(3664319..3665353) 1 NC_008596.1 identified by match to protein family HMM PF02653; ribose/xylose/arabinose/galactoside ABC-type transport systems, permeases 3665353 4530812 MSMEG_3601 Mycobacterium smegmatis str. MC2 155 ribose/xylose/arabinose/galactoside ABC-type transport systems, permeases YP_887904.1 3664319 R 246196 CDS YP_887905.1 118473187 4533304 complement(3665350..3666888) 1 NC_008596.1 identified by match to protein family HMM PF00005; ribose transport ATP-binding protein RbsA 3666888 4533304 MSMEG_3602 Mycobacterium smegmatis str. MC2 155 ribose transport ATP-binding protein RbsA YP_887905.1 3665350 R 246196 CDS YP_887906.1 118469360 4533184 complement(3666885..3667931) 1 NC_008596.1 identified by match to protein family HMM PF00107; oxidoreductase, zinc-binding dehydrogenase 3667931 4533184 MSMEG_3603 Mycobacterium smegmatis str. MC2 155 oxidoreductase, zinc-binding dehydrogenase YP_887906.1 3666885 R 246196 CDS YP_887907.1 118472559 4534143 complement(3667925..3668692) 1 NC_008596.1 identified by match to protein family HMM PF00106; sorbitol utilization protein SOU2 3668692 4534143 MSMEG_3604 Mycobacterium smegmatis str. MC2 155 sorbitol utilization protein SOU2 YP_887907.1 3667925 R 246196 CDS YP_887908.1 118468572 4533707 complement(3668719..3669759) 1 NC_008596.1 identified by match to protein family HMM PF00107; sorbitol dehydrogenase 3669759 4533707 MSMEG_3605 Mycobacterium smegmatis str. MC2 155 sorbitol dehydrogenase YP_887908.1 3668719 R 246196 CDS YP_887909.1 118472954 4531771 3669958..3670938 1 NC_008596.1 identified by match to protein family HMM PF04198; transcriptional regulator 3670938 4531771 MSMEG_3606 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_887909.1 3669958 D 246196 CDS YP_887910.1 118472198 4530856 3670935..3671717 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 3671717 4530856 MSMEG_3607 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_887910.1 3670935 D 246196 CDS YP_887911.1 118473382 4536627 complement(3671734..3673200) 1 NC_008596.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 3673200 4536627 MSMEG_3608 Mycobacterium smegmatis str. MC2 155 acetyl-CoA acetyltransferase YP_887911.1 3671734 R 246196 CDS YP_887912.1 118472677 4532942 3672598..3673341 1 NC_008596.1 hypothetical protein 3673341 4532942 MSMEG_3610 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887912.1 3672598 D 246196 CDS YP_887913.1 118468047 4534161 complement(3673257..3674240) 1 NC_008596.1 identified by match to protein family HMM PF00296; hydride transferase 1 3674240 4534161 MSMEG_3609 Mycobacterium smegmatis str. MC2 155 hydride transferase 1 YP_887913.1 3673257 R 246196 CDS YP_887914.1 118469963 4530926 3674267..3676639 1 NC_008596.1 identified by match to protein family HMM PF03894; phosphoketolase 3676639 xfp 4530926 xfp Mycobacterium smegmatis str. MC2 155 phosphoketolase YP_887914.1 3674267 D 246196 CDS YP_887915.1 118473489 4532122 3676719..3677468 1 NC_008596.1 identified by match to protein family HMM PF02517; integral membrane protein 3677468 4532122 MSMEG_3612 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_887915.1 3676719 D 246196 CDS YP_887916.1 118468697 4534687 complement(3677470..3678081) 1 NC_008596.1 identified by match to protein family HMM PF07336; hypothetical protein 3678081 4534687 MSMEG_3613 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887916.1 3677470 R 246196 CDS YP_887917.1 118470008 4532746 3678199..3678690 1 NC_008596.1 hypothetical protein 3678690 4532746 MSMEG_3614 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887917.1 3678199 D 246196 CDS YP_887918.1 118473763 4537739 complement(3678705..3679718) 1 NC_008596.1 identified by match to protein family HMM PF00107; match to protein family HMM TIGR02822; zinc-binding alcohol dehydrogenase 3679718 4537739 MSMEG_3615 Mycobacterium smegmatis str. MC2 155 zinc-binding alcohol dehydrogenase YP_887918.1 3678705 R 246196 CDS YP_887919.1 118467709 4537716 complement(3679739..3680041) 1 NC_008596.1 identified by match to protein family HMM PF04226; integral membrane protein 3680041 4537716 MSMEG_3616 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_887919.1 3679739 R 246196 CDS YP_887920.1 118472370 4534760 3680523..3680780 1 NC_008596.1 hypothetical protein 3680780 4534760 MSMEG_3617 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887920.1 3680523 D 246196 CDS YP_887921.1 118469719 4537593 complement(3680844..3681905) 1 NC_008596.1 identified by match to protein family HMM PF07174; hypothetical protein 3681905 4537593 MSMEG_3618 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887921.1 3680844 R 246196 CDS YP_887922.1 118473731 4536965 3682273..3682944 1 NC_008596.1 short chain dehydrogenase 3682944 4536965 MSMEG_3619 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_887922.1 3682273 D 246196 CDS YP_887923.1 118472963 4532301 3682967..3683896 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 3683896 4532301 MSMEG_3620 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887923.1 3682967 D 246196 CDS YP_887924.1 118469404 4531957 3683996..3685369 1 NC_008596.1 identified by similarity to GB:AAC46302.1; match to protein family HMM PF00070; match to protein family HMM PF07992; NADH dehydrogenase 3685369 ndh 4531957 ndh Mycobacterium smegmatis str. MC2 155 NADH dehydrogenase YP_887924.1 3683996 D 246196 CDS YP_887925.1 118469519 4536723 complement(3685389..3686027) 1 NC_008596.1 hypothetical protein 3686027 4536723 MSMEG_3622 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887925.1 3685389 R 246196 CDS YP_887926.1 118468125 4535212 complement(3686027..3686713) 1 NC_008596.1 identified by match to protein family HMM PF02492; match to protein family HMM TIGR00101; urease accessory protein UreG 3686713 ureG 4535212 ureG Mycobacterium smegmatis str. MC2 155 urease accessory protein UreG YP_887926.1 3686027 R 246196 CDS YP_887927.1 118470298 4533356 complement(3686744..3687379) 1 NC_008596.1 urease accessory protein uref 3687379 4533356 MSMEG_3624 Mycobacterium smegmatis str. MC2 155 urease accessory protein uref YP_887927.1 3686744 R 246196 CDS YP_887928.1 118473986 4531430 complement(3687380..3689113) 1 NC_008596.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 3689113 ureC 4531430 ureC Mycobacterium smegmatis str. MC2 155 urease subunit alpha YP_887928.1 3687380 R 246196 CDS YP_887929.1 118469234 4535370 complement(3689113..3689442) 1 NC_008596.1 identified by match to protein family HMM PF00699; match to protein family HMM TIGR00192; urease subunit beta 3689442 ureB 4535370 ureB Mycobacterium smegmatis str. MC2 155 urease subunit beta YP_887929.1 3689113 R 246196 CDS YP_887930.1 118472769 4531860 complement(3689452..3689754) 1 NC_008596.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 3689754 ureA 4531860 ureA Mycobacterium smegmatis str. MC2 155 urease subunit gamma YP_887930.1 3689452 R 246196 CDS YP_887931.1 118473500 4532133 complement(3689837..3690232) 1 NC_008596.1 identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; ComA operon protein 2 3690232 4532133 MSMEG_3628 Mycobacterium smegmatis str. MC2 155 ComA operon protein 2 YP_887931.1 3689837 R 246196 CDS YP_887932.1 118468222 4537037 complement(3690396..3691169) 1 NC_008596.1 hypothetical protein 3691169 4537037 MSMEG_3629 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887932.1 3690396 R 246196 CDS YP_887933.1 118468895 4536688 3691404..3691811 1 NC_008596.1 identified by match to protein family HMM PF03965; CopY family transcriptional regulator protein 3691811 4536688 MSMEG_3630 Mycobacterium smegmatis str. MC2 155 CopY family transcriptional regulator protein YP_887933.1 3691404 D 246196 CDS YP_887934.1 118470290 4537551 3691826..3692782 1 NC_008596.1 identified by match to protein family HMM PF01435; match to protein family HMM PF05569; integral membrane protein 3692782 4537551 MSMEG_3631 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_887934.1 3691826 D 246196 CDS YP_887935.1 118472260 4531569 3692833..3694299 1 NC_008596.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 3694299 gnd 4531569 gnd Mycobacterium smegmatis str. MC2 155 6-phosphogluconate dehydrogenase YP_887935.1 3692833 D 246196 CDS YP_887936.1 118472538 4532664 3694314..3695750 1 NC_008596.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase 3695750 4532664 MSMEG_3634 Mycobacterium smegmatis str. MC2 155 inosine 5-monophosphate dehydrogenase YP_887936.1 3694314 D 246196 CDS YP_887937.1 118470105 4534940 complement(3695733..3696785) 1 NC_008596.1 identified by match to protein family HMM PF00005; ferric cations import ATP-binding protein FbpC 3696785 4534940 MSMEG_3633 Mycobacterium smegmatis str. MC2 155 ferric cations import ATP-binding protein FbpC YP_887937.1 3695733 R 246196 CDS YP_887938.1 118467675 4536941 complement(3696787..3698292) 1 NC_008596.1 identified by match to protein family HMM PF00528; iron(III)-transporter permease SfuB 3698292 4536941 MSMEG_3635 Mycobacterium smegmatis str. MC2 155 iron(III)-transporter permease SfuB YP_887938.1 3696787 R 246196 CDS YP_887939.1 118473479 4531183 complement(3698337..3699386) 1 NC_008596.1 identified by match to protein family HMM PF01547; ABC transporter ferric iron-binding periplasmic protein 3699386 4531183 MSMEG_3636 Mycobacterium smegmatis str. MC2 155 ABC transporter ferric iron-binding periplasmic protein YP_887939.1 3698337 R 246196 CDS YP_887940.1 118473769 4537745 3699761..3701146 1 NC_008596.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; hypothetical protein 3701146 4537745 MSMEG_3637 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887940.1 3699761 D 246196 CDS YP_887941.1 118471401 4534876 3701139..3702233 1 NC_008596.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01595; hypothetical protein 3702233 4534876 MSMEG_3638 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887941.1 3701139 D 246196 CDS YP_887942.1 118470696 4532533 3702226..3703254 1 NC_008596.1 hypothetical protein 3703254 4532533 MSMEG_3639 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887942.1 3702226 D 246196 CDS YP_887943.1 118469725 4537600 3703284..3705449 1 NC_008596.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 3705449 glcB 4537600 glcB Mycobacterium smegmatis str. MC2 155 malate synthase G YP_887943.1 3703284 D 246196 CDS YP_887944.1 118471824 4536317 3705497..3707785 1 NC_008596.1 hypothetical protein 3707785 4536317 MSMEG_3641 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887944.1 3705497 D 246196 CDS YP_887945.1 118470287 4537548 complement(3707851..3710691) 1 NC_008596.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 3710691 gcvP 4537548 gcvP Mycobacterium smegmatis str. MC2 155 glycine dehydrogenase YP_887945.1 3707851 R 246196 CDS YP_887946.1 118472586 4534367 3710692..3710910 1 NC_008596.1 hypothetical protein 3710910 4534367 MSMEG_3643 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887946.1 3710692 D 246196 CDS YP_887947.1 118472612 4537262 complement(3711023..3711610) 1 NC_008596.1 MerR family transcriptional regulator 3711610 4537262 MSMEG_3644 Mycobacterium smegmatis str. MC2 155 MerR family transcriptional regulator YP_887947.1 3711023 R 246196 CDS YP_887948.1 118468808 4534064 complement(3711891..3712385) 1 NC_008596.1 identified by match to protein family HMM PF02577; hypothetical protein 3712385 4534064 MSMEG_3645 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887948.1 3711891 R 246196 CDS YP_887949.1 118471005 4533498 complement(3712479..3713243) 1 NC_008596.1 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 3713243 4533498 MSMEG_3646 Mycobacterium smegmatis str. MC2 155 MerR family transcriptional regulator YP_887949.1 3712479 R 246196 CDS YP_887950.1 118471814 4536307 complement(3713279..3713710) 1 NC_008596.1 identified by match to protein family HMM PF00498; forkhead-associated protein 3713710 4536307 MSMEG_3647 Mycobacterium smegmatis str. MC2 155 forkhead-associated protein YP_887950.1 3713279 R 246196 CDS YP_887951.1 118467731 4534014 complement(3713932..3714327) 1 NC_008596.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 3714327 gcvH 4534014 gcvH Mycobacterium smegmatis str. MC2 155 glycine cleavage system protein H YP_887951.1 3713932 R 246196 CDS YP_887952.1 118469842 4532733 complement(3714350..3715183) 1 NC_008596.1 identified by match to protein family HMM PF05949; hypothetical protein 3715183 4532733 MSMEG_3649 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887952.1 3714350 R 246196 CDS YP_887953.1 118472607 4536885 complement(3715210..3715542) 1 NC_008596.1 identified by match to protein family HMM PF06947; integral membrane protein 3715542 4536885 MSMEG_3650 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_887953.1 3715210 R 246196 CDS YP_887954.1 118471081 4537524 complement(3715572..3716495) 1 NC_008596.1 identified by match to protein family HMM PF05949; membrane associated protein 3716495 4537524 MSMEG_3651 Mycobacterium smegmatis str. MC2 155 membrane associated protein YP_887954.1 3715572 R 246196 CDS YP_887955.1 118470457 4534520 3716443..3717138 1 NC_008596.1 hypothetical protein 3717138 4534520 MSMEG_3653 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887955.1 3716443 D 246196 CDS YP_887956.1 118469563 4537509 complement(3716506..3717096) 1 NC_008596.1 identified by match to protein family HMM PF01066; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3717096 4537509 MSMEG_3652 Mycobacterium smegmatis str. MC2 155 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_887956.1 3716506 R 246196 CDS YP_887957.1 118468764 4534253 complement(3717156..3719510) 1 NC_008596.1 SecA2; functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond to SecA2; which is non-essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 3719510 azi 4534253 azi Mycobacterium smegmatis str. MC2 155 preprotein translocase subunit SecA YP_887957.1 3717156 R 246196 CDS YP_887958.1 118469707 4537212 3719609..3721534 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF06472; ABC transporter permease 3721534 4537212 MSMEG_3655 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_887958.1 3719609 D 246196 CDS YP_887959.1 118467368 4534053 3721548..3723488 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF06472; ABC transporter permease 3723488 4534053 MSMEG_3656 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_887959.1 3721548 D 246196 CDS YP_887960.1 118472320 4532908 complement(3723502..3725001) 1 NC_008596.1 identified by match to protein family HMM PF00890; match to protein family HMM PF01266; hypothetical protein 3725001 4532908 MSMEG_3657 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887960.1 3723502 R 246196 CDS YP_887961.1 118468064 4533011 complement(3724998..3725492) 1 NC_008596.1 hypothetical protein 3725492 4533011 MSMEG_3658 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887961.1 3724998 R 246196 CDS YP_887962.1 118469001 4536051 complement(3725537..3726226) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3726226 4536051 MSMEG_3659 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_887962.1 3725537 R 246196 CDS YP_887963.1 118469578 4531452 3726341..3726784 1 NC_008596.1 hypothetical protein 3726784 4531452 MSMEG_3660 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887963.1 3726341 D 246196 CDS YP_887964.1 118467948 4532059 complement(3726804..3727496) 1 NC_008596.1 hypothetical protein 3727496 4532059 MSMEG_3661 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887964.1 3726804 R 246196 CDS YP_887965.1 118468679 4535902 complement(3727672..3728298) 1 NC_008596.1 identified by match to protein family HMM PF01453; match to protein family HMM PF01476; mannose-binding lectin 3728298 4535902 MSMEG_3662 Mycobacterium smegmatis str. MC2 155 mannose-binding lectin YP_887965.1 3727672 R 246196 CDS YP_887966.1 118469702 4537207 complement(3728448..3729863) 1 NC_008596.1 identified by match to protein family HMM PF01266; oxidoreductase 3729863 4537207 MSMEG_3663 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_887966.1 3728448 R 246196 CDS YP_887967.1 118472492 4532443 complement(3729915..3731060) 1 NC_008596.1 identified by match to protein family HMM PF00999; transporter monovalent cation:proton antiporter-2 (CPA2) family protein 3731060 4532443 MSMEG_3664 Mycobacterium smegmatis str. MC2 155 transporter monovalent cation:proton antiporter-2 (CPA2) family protein YP_887967.1 3729915 R 246196 CDS YP_887968.1 118468872 4533757 complement(3731063..3731569) 1 NC_008596.1 identified by match to protein family HMM PF02080; TrkA domain-containing protein 3731569 4533757 MSMEG_3665 Mycobacterium smegmatis str. MC2 155 TrkA domain-containing protein YP_887968.1 3731063 R 246196 CDS YP_887969.1 118470601 4532103 complement(3731597..3732520) 1 NC_008596.1 C-5 sterol desaturase 3732520 4532103 MSMEG_3666 Mycobacterium smegmatis str. MC2 155 C-5 sterol desaturase YP_887969.1 3731597 R 246196 CDS YP_887970.1 118467485 4537003 complement(3732542..3734104) 1 NC_008596.1 identified by match to protein family HMM PF00135; para-nitrobenzyl esterase 3734104 4537003 MSMEG_3667 Mycobacterium smegmatis str. MC2 155 para-nitrobenzyl esterase YP_887970.1 3732542 R 246196 CDS YP_887971.1 118468527 4535352 3734280..3735554 1 NC_008596.1 identified by match to protein family HMM PF08028; acyl-CoA dehydrogenase 3735554 4535352 MSMEG_3668 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_887971.1 3734280 D 246196 CDS YP_887972.1 118473661 4531232 3735585..3736673 1 NC_008596.1 hypothetical protein 3736673 4531232 MSMEG_3669 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887972.1 3735585 D 246196 CDS YP_887973.1 118472281 4534807 3736700..3737035 1 NC_008596.1 identified by similarity to SP:Q57225; match to protein family HMM PF00893; transporter small multidrug resistance (SMR) family protein 3737035 4534807 MSMEG_3670 Mycobacterium smegmatis str. MC2 155 transporter small multidrug resistance (SMR) family protein YP_887973.1 3736700 D 246196 CDS YP_887974.1 118469651 4535061 3737032..3737358 1 NC_008596.1 identified by similarity to SP:Q57225; match to protein family HMM PF00893; transporter small multidrug resistance (SMR) family protein 3737358 4535061 MSMEG_3672 Mycobacterium smegmatis str. MC2 155 transporter small multidrug resistance (SMR) family protein YP_887974.1 3737032 D 246196 CDS YP_887975.1 118472059 4536699 complement(3737317..3738537) 1 NC_008596.1 identified by match to protein family HMM PF07690; integral membrane protein 3738537 4536699 MSMEG_3671 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_887975.1 3737317 R 246196 CDS YP_887976.1 118473566 4531000 3738781..3740985 1 NC_008596.1 identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217; 4-alpha-glucanotransferase 3740985 malQ 4531000 malQ Mycobacterium smegmatis str. MC2 155 4-alpha-glucanotransferase YP_887976.1 3738781 D 246196 CDS YP_887977.1 118472852 4537448 3741065..3741475 1 NC_008596.1 hypothetical protein 3741475 4537448 MSMEG_3674 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887977.1 3741065 D 246196 CDS YP_887978.1 118470793 4536077 3741641..3742540 1 NC_008596.1 metal-dependent hydrolase 3742540 4536077 MSMEG_3675 Mycobacterium smegmatis str. MC2 155 metal-dependent hydrolase YP_887978.1 3741641 D 246196 CDS YP_887979.1 118468623 4535021 3742546..3743655 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; phenoxybenzoate dioxygenase subunit beta 3743655 4535021 MSMEG_3676 Mycobacterium smegmatis str. MC2 155 phenoxybenzoate dioxygenase subunit beta YP_887979.1 3742546 D 246196 CDS YP_887980.1 118473542 4532412 3743679..3745160 1 NC_008596.1 identified by match to protein family HMM PF00069; serine/threonine protein kinase 3745160 4532412 MSMEG_3677 Mycobacterium smegmatis str. MC2 155 serine/threonine protein kinase YP_887980.1 3743679 D 246196 CDS YP_887981.1 118471694 4536456 3745516..3745836 1 NC_008596.1 hypothetical protein 3745836 4536456 MSMEG_3678 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887981.1 3745516 D 246196 CDS YP_887982.1 118473550 4532420 complement(3746175..3746669) 1 NC_008596.1 identified by match to protein family HMM PF00293; phosphohydrolase 3746669 4532420 MSMEG_3679 Mycobacterium smegmatis str. MC2 155 phosphohydrolase YP_887982.1 3746175 R 246196 CDS YP_887983.1 118469504 4533332 3746956..3747261 1 NC_008596.1 hypothetical protein 3747261 4533332 MSMEG_3680 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887983.1 3746956 D 246196 CDS YP_887984.1 118468925 4537459 3747389..3748171 1 NC_008596.1 identified by match to protein family HMM PF00657; hypothetical protein 3748171 4537459 MSMEG_3682 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887984.1 3747389 D 246196 CDS YP_887985.1 118471785 4536356 complement(3748168..3748584) 1 NC_008596.1 identified by match to protein family HMM PF05305; hypothetical protein 3748584 4536356 MSMEG_3681 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887985.1 3748168 R 246196 CDS YP_887986.1 118472575 4534354 complement(3748660..3749223) 1 NC_008596.1 hypothetical protein 3749223 4534354 MSMEG_3683 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887986.1 3748660 R 246196 CDS YP_887987.1 118468298 4533056 complement(3749291..3750151) 1 NC_008596.1 identified by match to protein family HMM PF02136; steroid delta-isomerase 3750151 4533056 MSMEG_3684 Mycobacterium smegmatis str. MC2 155 steroid delta-isomerase YP_887987.1 3749291 R 246196 CDS YP_887988.1 118469083 4537638 3750230..3750661 1 NC_008596.1 hypothetical protein 3750661 4537638 MSMEG_3685 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887988.1 3750230 D 246196 CDS YP_887989.1 118472096 4537477 3750763..3751188 1 NC_008596.1 hypothetical protein 3751188 4537477 MSMEG_3686 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887989.1 3750763 D 246196 CDS YP_887990.1 118472846 4537442 3751261..3752916 1 NC_008596.1 activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence; acyl-CoA synthetase 3752916 4537442 MSMEG_3687 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_887990.1 3751261 D 246196 CDS YP_887991.1 118469600 4531105 complement(3752918..3753229) 1 NC_008596.1 hypothetical protein 3753229 4531105 MSMEG_3688 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887991.1 3752918 R 246196 CDS YP_887992.1 118468997 4535107 complement(3753243..3754973) 1 NC_008596.1 identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813; sodium:solute symporter 3754973 4535107 MSMEG_3689 Mycobacterium smegmatis str. MC2 155 sodium:solute symporter YP_887992.1 3753243 R 246196 CDS YP_887993.1 118470958 4534530 3755928..3757010 1 NC_008596.1 identified by match to protein family HMM PF01087; match to protein family HMM PF02744; match to protein family HMM TIGR00209; galactose-1-phosphate uridylyltransferase 3757010 galT 4534530 galT Mycobacterium smegmatis str. MC2 155 galactose-1-phosphate uridylyltransferase YP_887993.1 3755928 D 246196 CDS YP_887994.1 118472337 4534228 3757013..3758101 1 NC_008596.1 catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase 3758101 galK 4534228 galK Mycobacterium smegmatis str. MC2 155 galactokinase YP_887994.1 3757013 D 246196 CDS YP_887995.1 118468793 4535311 complement(3758177..3759400) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 monooxygenase 3759400 4535311 MSMEG_3693 Mycobacterium smegmatis str. MC2 155 cytochrome P450 monooxygenase YP_887995.1 3758177 R 246196 CDS YP_887996.1 118471690 4536452 3759496..3760995 1 NC_008596.1 identified by match to protein family HMM PF00501; feruloyl-CoA synthetase 3760995 4536452 MSMEG_3694 Mycobacterium smegmatis str. MC2 155 feruloyl-CoA synthetase YP_887996.1 3759496 D 246196 CDS YP_887997.1 118470049 4534594 3761143..3761553 1 NC_008596.1 hypothetical protein 3761553 4534594 MSMEG_3695 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_887997.1 3761143 D 246196 CDS YP_887998.1 118470543 4532997 3761653..3762354 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 3762354 4532997 MSMEG_3696 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_887998.1 3761653 D 246196 CDS YP_887999.1 118467651 4534999 complement(3762362..3763684) 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 3763684 4534999 MSMEG_3697 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_887999.1 3762362 R 246196 CDS YP_888000.1 118470204 4532498 3763403..3763897 1 NC_008596.1 hypothetical protein 3763897 4532498 MSMEG_3698 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888000.1 3763403 D 246196 CDS YP_888001.1 118467711 4537719 3763858..3763968 1 NC_008596.1 hypothetical protein 3763968 4537719 MSMEG_3699 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888001.1 3763858 D 246196 CDS YP_888002.1 118473026 4532347 3763971..3765302 1 NC_008596.1 identified by match to protein family HMM TIGR01413; peroxidase 3765302 4532347 MSMEG_3700 Mycobacterium smegmatis str. MC2 155 peroxidase YP_888002.1 3763971 D 246196 CDS YP_888003.1 118472277 4534803 3765299..3766309 1 NC_008596.1 hypothetical protein 3766309 4534803 MSMEG_3701 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888003.1 3765299 D 246196 CDS YP_888004.1 118469218 4533272 3766881..3767561 1 NC_008596.1 hypothetical protein 3767561 4533272 MSMEG_3703 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888004.1 3766881 D 246196 CDS YP_888005.1 118468487 4537676 3767728..3768630 1 NC_008596.1 identified by match to protein family HMM PF01370; 3-alpha-hydroxysteroid dehydrogenase 3768630 4537676 MSMEG_3704 Mycobacterium smegmatis str. MC2 155 3-alpha-hydroxysteroid dehydrogenase YP_888005.1 3767728 D 246196 CDS YP_888006.1 118470484 4537168 3768650..3769939 1 NC_008596.1 identified by match to protein family HMM PF07690; major facilitator superfamily protein 3769939 4537168 MSMEG_3705 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_888006.1 3768650 D 246196 CDS YP_888007.1 118471001 4533494 3770113..3772422 1 NC_008596.1 identified by match to protein family HMM PF00463; match to protein family HMM TIGR01346; isocitrate lyase 3772422 aceA 4533494 aceA Mycobacterium smegmatis str. MC2 155 isocitrate lyase YP_888007.1 3770113 D 246196 CDS YP_888008.1 118469479 4534453 3772431..3773042 1 NC_008596.1 hypothetical protein 3773042 4534453 MSMEG_3707 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888008.1 3772431 D 246196 CDS YP_888009.1 118472569 4534153 3773112..3774191 1 NC_008596.1 identified by match to protein family HMM PF00199; catalase 3774191 4534153 MSMEG_3708 Mycobacterium smegmatis str. MC2 155 catalase YP_888009.1 3773112 D 246196 CDS YP_888010.1 118468945 4532608 3774188..3774766 1 NC_008596.1 identified by match to protein family HMM PF01292; cytochrome b561 family protein 3774766 4532608 MSMEG_3710 Mycobacterium smegmatis str. MC2 155 cytochrome b561 family protein YP_888010.1 3774188 D 246196 CDS YP_888011.1 118469603 4531108 complement(3774749..3776077) 1 NC_008596.1 hypothetical protein 3776077 4531108 MSMEG_3709 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888011.1 3774749 R 246196 CDS YP_888012.1 118472227 4531478 complement(3776153..3776272) 1 NC_008596.1 hypothetical protein 3776272 4531478 MSMEG_3711 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888012.1 3776153 R 246196 CDS YP_888013.1 118471671 4536472 3776285..3776467 1 NC_008596.1 hypothetical protein 3776467 4536472 MSMEG_3712 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888013.1 3776285 D 246196 CDS YP_888014.1 118469791 4535815 3776635..3777081 1 NC_008596.1 hypothetical protein 3777081 4535815 MSMEG_3713 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888014.1 3776635 D 246196 CDS YP_888015.1 118470551 4533005 3777183..3777833 1 NC_008596.1 hypothetical protein 3777833 4533005 MSMEG_3714 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888015.1 3777183 D 246196 CDS YP_888016.1 118467617 4533079 3778220..3785944 1 NC_008596.1 identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; match to protein family HMM TIGR01746; linear gramicidin synthetase subunit C 3785944 4533079 MSMEG_3715 Mycobacterium smegmatis str. MC2 155 linear gramicidin synthetase subunit C YP_888016.1 3778220 D 246196 CDS YP_888017.1 118468646 4533578 3786107..3786208 1 NC_008596.1 hypothetical protein 3786208 4533578 MSMEG_3716 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888017.1 3786107 D 246196 CDS YP_888018.1 118470408 4534181 3787202..3787639 1 NC_008596.1 identified by match to protein family HMM PF06803; hypothetical protein 3787639 4534181 MSMEG_3718 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888018.1 3787202 D 246196 CDS YP_888019.1 118468926 4537460 complement(3787674..3788843) 1 NC_008596.1 identified by match to protein family HMM PF01699; sodium/calcium exchanger protein 3788843 4537460 MSMEG_3719 Mycobacterium smegmatis str. MC2 155 sodium/calcium exchanger protein YP_888019.1 3787674 R 246196 CDS YP_888020.1 118467363 4534048 complement(3788855..3789061) 1 NC_008596.1 recombination activating protein 1 3789061 4534048 MSMEG_3720 Mycobacterium smegmatis str. MC2 155 recombination activating protein 1 YP_888020.1 3788855 R 246196 CDS YP_888021.1 118473280 4535542 complement(3789058..3790188) 1 NC_008596.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR02109; pyrroloquinoline quinone biosynthesis protein PqqE 3790188 pqqE 4535542 pqqE Mycobacterium smegmatis str. MC2 155 pyrroloquinoline quinone biosynthesis protein PqqE YP_888021.1 3789058 R 246196 CDS YP_888022.1 118471956 4536180 complement(3790181..3790459) 1 NC_008596.1 identified by match to protein family HMM PF05402; bifunctional coenzyme PQQ synthesis protein C/D 3790459 4536180 MSMEG_3722 Mycobacterium smegmatis str. MC2 155 bifunctional coenzyme PQQ synthesis protein C/D YP_888022.1 3790181 R 246196 CDS YP_888023.1 118470311 4535189 complement(3790446..3791162) 1 NC_008596.1 Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC 3791162 pqqC 4535189 pqqC Mycobacterium smegmatis str. MC2 155 pyrroloquinoline quinone biosynthesis protein PqqC YP_888023.1 3790446 R 246196 CDS YP_888024.1 118468995 4535105 complement(3791172..3792074) 1 NC_008596.1 possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB 3792074 pqqB 4535105 pqqB Mycobacterium smegmatis str. MC2 155 pyrroloquinoline quinone biosynthesis protein PqqB YP_888024.1 3791172 R 246196 CDS YP_888025.1 118473606 4531041 complement(3792156..3792269) 1 NC_008596.1 identified by match to protein family HMM TIGR02107; coenzyme PQQ biosynthesis protein A 3792269 pqqA 4531041 pqqA Mycobacterium smegmatis str. MC2 155 coenzyme PQQ biosynthesis protein A YP_888025.1 3792156 R 246196 CDS YP_888026.1 118470090 4532965 complement(3792319..3794004) 1 NC_008596.1 identified by match to protein family HMM PF01011; match to protein family HMM TIGR03075; alcohol dehydrogenase 3794004 4532965 MSMEG_3726 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_888026.1 3792319 R 246196 CDS YP_888027.1 118469085 4537641 complement(3794018..3794488) 1 NC_008596.1 hypothetical protein 3794488 4537641 MSMEG_3727 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888027.1 3794018 R 246196 CDS YP_888028.1 118468295 4533053 3794524..3794658 1 NC_008596.1 hypothetical protein 3794658 4533053 MSMEG_3728 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888028.1 3794524 D 246196 CDS YP_888029.1 118471920 4536221 complement(3794904..3796970) 1 NC_008596.1 identified by match to protein family HMM PF00141; match to protein family HMM TIGR00198; catalase/peroxidase HPI 3796970 katG 4536221 katG Mycobacterium smegmatis str. MC2 155 catalase/peroxidase HPI YP_888029.1 3794904 R 246196 CDS YP_888030.1 118469547 4537122 complement(3797154..3798542) 1 NC_008596.1 identified by match to protein family HMM PF04397; Fis family transcriptional regulator 3798542 4537122 MSMEG_3730 Mycobacterium smegmatis str. MC2 155 Fis family transcriptional regulator YP_888030.1 3797154 R 246196 CDS YP_888031.1 118473764 4537740 complement(3798739..3799824) 1 NC_008596.1 identified by match to protein family HMM PF01244; dipeptidase 2 3799824 4537740 MSMEG_3731 Mycobacterium smegmatis str. MC2 155 dipeptidase 2 YP_888031.1 3798739 R 246196 CDS YP_888032.1 118471332 4534845 3799807..3799917 1 NC_008596.1 hypothetical protein 3799917 4534845 MSMEG_3732 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888032.1 3799807 D 246196 CDS YP_888033.1 118473842 4531996 complement(3800054..3800311) 1 NC_008596.1 hypothetical protein 3800311 4531996 MSMEG_3733 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888033.1 3800054 R 246196 CDS YP_888034.1 118473175 4532577 complement(3800703..3801659) 1 NC_008596.1 identified by match to protein family HMM PF01925; hypothetical protein 3801659 4532577 MSMEG_3735 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888034.1 3800703 R 246196 CDS YP_888035.1 118473850 4533550 complement(3801719..3801829) 1 NC_008596.1 hypothetical protein 3801829 4533550 MSMEG_3736 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888035.1 3801719 R 246196 CDS YP_888036.1 118469136 4532552 complement(3801921..3802703) 1 NC_008596.1 identified by match to protein family HMM PF01925; integral membrane protein 3802703 4532552 MSMEG_3737 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_888036.1 3801921 R 246196 CDS YP_888037.1 118468050 4534164 complement(3802774..3804189) 1 NC_008596.1 synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 3804189 engA 4534164 engA Mycobacterium smegmatis str. MC2 155 GTP-binding protein EngA YP_888037.1 3802774 R 246196 CDS YP_888038.1 118468692 4534682 complement(3804186..3804872) 1 NC_008596.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 3804872 cmk 4534682 cmk Mycobacterium smegmatis str. MC2 155 cytidylate kinase YP_888038.1 3804186 R 246196 CDS YP_888039.1 118470853 4534308 complement(3804869..3805612) 1 NC_008596.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase B 3805612 rluB 4534308 rluB Mycobacterium smegmatis str. MC2 155 ribosomal large subunit pseudouridine synthase B YP_888039.1 3804869 R 246196 CDS YP_888040.1 118471424 4532807 complement(3805614..3806444) 1 NC_008596.1 identified by match to protein family HMM PF04079; match to protein family HMM TIGR00281; transcriptional regulator 3806444 4532807 MSMEG_3741 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_888040.1 3805614 R 246196 CDS YP_888041.1 118467410 4535832 complement(3806453..3807355) 1 NC_008596.1 identified by match to protein family HMM PF02616; segregation and condensation protein A 3807355 scpA 4535832 scpA Mycobacterium smegmatis str. MC2 155 segregation and condensation protein A YP_888041.1 3806453 R 246196 CDS YP_888042.1 118470102 4534937 complement(3807352..3808185) 1 NC_008596.1 identified by match to protein family HMM PF01656; SpoOJ regulator protein 3808185 soj 4534937 soj Mycobacterium smegmatis str. MC2 155 SpoOJ regulator protein YP_888042.1 3807352 R 246196 CDS YP_888043.1 118467405 4535827 complement(3808346..3809302) 1 NC_008596.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 3809302 xerD 4535827 xerD Mycobacterium smegmatis str. MC2 155 site-specific tyrosine recombinase XerD YP_888043.1 3808346 R 246196 CDS YP_888044.1 118470296 4533354 complement(3809299..3809919) 1 NC_008596.1 identified by match to protein family HMM PF00293; MutT/nudix family protein 3809919 4533354 MSMEG_3745 Mycobacterium smegmatis str. MC2 155 MutT/nudix family protein YP_888044.1 3809299 R 246196 CDS YP_888045.1 118473994 4531438 complement(3809912..3811684) 1 NC_008596.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 3811684 pyrG 4531438 pyrG Mycobacterium smegmatis str. MC2 155 CTP synthetase YP_888045.1 3809912 R 246196 CDS YP_888046.1 118468476 4537297 complement(3812765..3813961) 1 NC_008596.1 thiamin pyrophosphokinase catalytic subunit 3813961 4537297 MSMEG_3748 Mycobacterium smegmatis str. MC2 155 thiamin pyrophosphokinase catalytic subunit YP_888046.1 3812765 R 246196 CDS YP_888047.1 118471456 4534375 complement(3815858..3816781) 1 NC_008596.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 3816781 ppnK 4534375 ppnK Mycobacterium smegmatis str. MC2 155 inorganic polyphosphate/ATP-NAD kinase YP_888047.1 3815858 R 246196 CDS YP_888048.1 118469022 4530874 complement(3816778..3817587) 1 NC_008596.1 identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478; hemolysin A 3817587 4530874 MSMEG_3751 Mycobacterium smegmatis str. MC2 155 hemolysin A YP_888048.1 3816778 R 246196 CDS YP_888049.1 118469330 4535920 complement(3817594..3817800) 1 NC_008596.1 hypothetical protein 3817800 4535920 MSMEG_3752 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888049.1 3817594 R 246196 CDS YP_888050.1 118469538 4537112 complement(3817814..3818842) 1 NC_008596.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460; hydrolase 3818842 4537112 MSMEG_3753 Mycobacterium smegmatis str. MC2 155 hydrolase YP_888050.1 3817814 R 246196 CDS YP_888051.1 118472115 4532157 complement(3818844..3819833) 1 NC_008596.1 hypothetical protein 3819833 4532157 MSMEG_3754 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888051.1 3818844 R 246196 CDS YP_888052.1 118469309 4533374 complement(3825494..3826816) 1 NC_008596.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 3826816 tyrS 4533374 tyrS Mycobacterium smegmatis str. MC2 155 tyrosyl-tRNA synthetase YP_888052.1 3825494 R 246196 CDS YP_888053.1 118473290 4535552 complement(3826823..3827446) 1 NC_008596.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 3827446 4535552 MSMEG_3759 Mycobacterium smegmatis str. MC2 155 3-methyladenine DNA glycosylase YP_888053.1 3826823 R 246196 CDS YP_888054.1 118470858 4534313 3827521..3827730 1 NC_008596.1 hypothetical protein 3827730 4534313 MSMEG_3760 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888054.1 3827521 D 246196 CDS YP_888055.1 118470816 4531926 3827733..3828299 1 NC_008596.1 identified by match to protein family HMM PF02861; Clp protease subunit 3828299 4531926 MSMEG_3761 Mycobacterium smegmatis str. MC2 155 Clp protease subunit YP_888055.1 3827733 D 246196 CDS YP_888056.1 118469618 4531590 3828376..3829140 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3829140 4531590 MSMEG_3762 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_888056.1 3828376 D 246196 CDS YP_888057.1 118472419 4531341 3829137..3829907 1 NC_008596.1 identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025; ABC transporter 3829907 4531341 MSMEG_3763 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_888057.1 3829137 D 246196 CDS YP_888058.1 118468038 4531395 3829921..3830556 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 3830556 4531395 MSMEG_3765 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_888058.1 3829921 D 246196 CDS YP_888059.1 118467750 4535650 complement(3830530..3830739) 1 NC_008596.1 identified by match to protein family HMM PF03966; hypothetical protein 3830739 4535650 MSMEG_3764 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888059.1 3830530 R 246196 CDS YP_888060.1 118474013 4530973 complement(3830749..3831285) 1 NC_008596.1 hypothetical protein 3831285 4530973 MSMEG_3766 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888060.1 3830749 R 246196 CDS YP_888061.1 118471594 4536545 complement(3831361..3834354) 1 NC_008596.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 3834354 4536545 MSMEG_3767 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_888061.1 3831361 R 246196 CDS YP_888062.1 118473100 4531161 3834599..3836371 1 NC_008596.1 identified by match to protein family HMM PF00005; macrolide ABC transporter ATP-binding protein 3836371 4531161 MSMEG_3768 Mycobacterium smegmatis str. MC2 155 macrolide ABC transporter ATP-binding protein YP_888062.1 3834599 D 246196 CDS YP_888063.1 118471124 4533483 complement(3836484..3837893) 1 NC_008596.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 3837893 argH 4533483 argH Mycobacterium smegmatis str. MC2 155 argininosuccinate lyase YP_888063.1 3836484 R 246196 CDS YP_888064.1 118468824 4534080 complement(3837986..3839185) 1 NC_008596.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 3839185 argG 4534080 argG Mycobacterium smegmatis str. MC2 155 argininosuccinate synthase YP_888064.1 3837986 R 246196 CDS YP_888065.1 118467361 4534046 complement(3839211..3839687) 1 NC_008596.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 3839687 argR 4534046 argR Mycobacterium smegmatis str. MC2 155 arginine repressor YP_888065.1 3839211 R 246196 CDS YP_888066.1 118473037 4533190 complement(3839692..3840615) 1 NC_008596.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 3840615 argF 4533190 argF Mycobacterium smegmatis str. MC2 155 ornithine carbamoyltransferase YP_888066.1 3839692 R 246196 CDS YP_888067.1 118472927 4531216 complement(3840612..3841784) 1 NC_008596.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 3841784 argD 4531216 argD Mycobacterium smegmatis str. MC2 155 acetylornithine aminotransferase YP_888067.1 3840612 R 246196 CDS YP_888068.1 118471365 4535272 complement(3841781..3842662) 1 NC_008596.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 3842662 argB 4535272 argB Mycobacterium smegmatis str. MC2 155 acetylglutamate kinase YP_888068.1 3841781 R 246196 CDS YP_888069.1 118468485 4537674 complement(3842659..3843855) 1 NC_008596.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 3843855 argJ 4537674 argJ Mycobacterium smegmatis str. MC2 155 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_888069.1 3842659 R 246196 CDS YP_888070.1 118471377 4535285 complement(3843864..3844895) 1 NC_008596.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 3844895 argC 4535285 argC Mycobacterium smegmatis str. MC2 155 N-acetyl-gamma-glutamyl-phosphate reductase YP_888070.1 3843864 R 246196 CDS YP_888071.1 118467858 4532880 complement(3845187..3847685) 1 NC_008596.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 3847685 pheT 4532880 pheT Mycobacterium smegmatis str. MC2 155 phenylalanyl-tRNA synthetase subunit beta YP_888071.1 3845187 R 246196 CDS YP_888072.1 118472687 4532952 complement(3847685..3848755) 1 NC_008596.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 3848755 pheS 4532952 pheS Mycobacterium smegmatis str. MC2 155 phenylalanyl-tRNA synthetase subunit alpha YP_888072.1 3847685 R 246196 CDS YP_888073.1 118467453 4536598 complement(3849549..3850331) 1 NC_008596.1 identified by match to protein family HMM PF00211; adenylate and guanylate cyclase catalytic domain-containing protein 3850331 4536598 MSMEG_3780 Mycobacterium smegmatis str. MC2 155 adenylate and guanylate cyclase catalytic domain-containing protein YP_888073.1 3849549 R 246196 CDS YP_888074.1 118473605 4531040 3850705..3851742 1 NC_008596.1 hypothetical protein 3851742 4531040 MSMEG_3781 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888074.1 3850705 D 246196 CDS YP_888075.1 118469597 4531102 3851791..3853026 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 3853026 4531102 MSMEG_3783 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_888075.1 3851791 D 246196 CDS YP_888076.1 118469687 4536820 complement(3853023..3853430) 1 NC_008596.1 identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; endoribonuclease L-PSP 3853430 4536820 MSMEG_3782 Mycobacterium smegmatis str. MC2 155 endoribonuclease L-PSP YP_888076.1 3853023 R 246196 CDS YP_888077.1 118468741 4534269 complement(3853450..3854205) 1 NC_008596.1 identified by match to protein family HMM PF01614; IclR family transcriptional regulator 3854205 4534269 MSMEG_3784 Mycobacterium smegmatis str. MC2 155 IclR family transcriptional regulator YP_888077.1 3853450 R 246196 CDS YP_888078.1 118473952 4533898 complement(3854210..3855205) 1 NC_008596.1 identified by match to protein family HMM PF00294; PfkB-family protein carbohydrate kinase 3855205 4533898 MSMEG_3785 Mycobacterium smegmatis str. MC2 155 PfkB-family protein carbohydrate kinase YP_888078.1 3854210 R 246196 CDS YP_888079.1 118471037 4536739 3855341..3856615 1 NC_008596.1 D-amino acid deaminase 3856615 4536739 MSMEG_3786 Mycobacterium smegmatis str. MC2 155 D-amino acid deaminase YP_888079.1 3855341 D 246196 CDS YP_888080.1 118469914 4535568 3856615..3858216 1 NC_008596.1 identified by match to protein family HMM PF07908; match to protein family HMM PF07969; D-aminoacylase 3858216 4535568 MSMEG_3787 Mycobacterium smegmatis str. MC2 155 D-aminoacylase YP_888080.1 3856615 D 246196 CDS YP_888081.1 118468141 4532684 3858213..3858842 1 NC_008596.1 identified by match to protein family HMM PF01081; match to protein family HMM TIGR01182; 2-dehydro-3-deoxyphosphogluconate aldolase 3858842 eda 4532684 eda Mycobacterium smegmatis str. MC2 155 2-dehydro-3-deoxyphosphogluconate aldolase YP_888081.1 3858213 D 246196 CDS YP_888082.1 118472611 4537261 3858872..3860263 1 NC_008596.1 identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791; inner membrane permease YgbN 3860263 4537261 MSMEG_3789 Mycobacterium smegmatis str. MC2 155 inner membrane permease YgbN YP_888082.1 3858872 D 246196 CDS YP_888083.1 118468977 4533542 complement(3860269..3861027) 1 NC_008596.1 identified by match to protein family HMM PF00588; match to protein family HMM PF08032; TrmH family RNA methyltransferase 3861027 4533542 MSMEG_3790 Mycobacterium smegmatis str. MC2 155 TrmH family RNA methyltransferase YP_888083.1 3860269 R 246196 CDS YP_888084.1 118470795 4536079 complement(3861051..3861440) 1 NC_008596.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 3861440 rplT 4536079 rplT Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L20 YP_888084.1 3861051 R 246196 CDS YP_888085.1 118473237 4536924 complement(3861482..3861676) 1 NC_008596.1 identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 3861676 rpmI 4536924 rpmI Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L35 YP_888085.1 3861482 R 246196 CDS YP_888086.1 118469171 4534278 complement(3861730..3862350) 1 NC_008596.1 identified by match to protein family HMM PF00707; match to protein family HMM PF05198; match to protein family HMM TIGR00168; translation initiation factor IF-3 3862350 infC 4534278 infC Mycobacterium smegmatis str. MC2 155 translation initiation factor IF-3 YP_888086.1 3861730 R 246196 CDS YP_888087.1 118471298 4532192 complement(3862415..3862528) 1 NC_008596.1 hypothetical protein 3862528 4532192 MSMEG_3794 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888087.1 3862415 R 246196 CDS YP_888088.1 118472498 4532449 3862580..3862939 1 NC_008596.1 hypothetical protein 3862939 4532449 MSMEG_3795 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888088.1 3862580 D 246196 CDS YP_888089.1 118468939 4537473 3863058..3866327 1 NC_008596.1 catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase 3866327 lysS 4537473 lysS Mycobacterium smegmatis str. MC2 155 lysyl-tRNA synthetase YP_888089.1 3863058 D 246196 CDS YP_888090.1 118470145 4531704 3866375..3867739 1 NC_008596.1 identified by match to protein family HMM PF00756; esterase 3867739 4531704 MSMEG_3797 Mycobacterium smegmatis str. MC2 155 esterase YP_888090.1 3866375 D 246196 CDS YP_888091.1 118469055 4536869 complement(3867751..3868779) 1 NC_008596.1 hypothetical protein 3868779 4536869 MSMEG_3798 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888091.1 3867751 R 246196 CDS YP_888092.1 118471379 4534973 complement(3868776..3870062) 1 NC_008596.1 hypothetical protein 3870062 4534973 MSMEG_3799 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888092.1 3868776 R 246196 CDS YP_888093.1 118472248 4532469 3870193..3870660 1 NC_008596.1 hypothetical protein 3870660 4532469 MSMEG_3800 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888093.1 3870193 D 246196 CDS YP_888094.1 118471820 4536313 complement(3870666..3871853) 1 NC_008596.1 hypothetical protein 3871853 4536313 MSMEG_3801 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888094.1 3870666 R 246196 CDS YP_888095.1 118473431 4534122 complement(3871850..3873571) 1 NC_008596.1 identified by match to protein family HMM PF07721; hypothetical protein 3873571 4534122 MSMEG_3802 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888095.1 3871850 R 246196 CDS YP_888096.1 118472693 4531661 complement(3873637..3874113) 1 NC_008596.1 lipoprotein LpqH 3874113 4531661 MSMEG_3803 Mycobacterium smegmatis str. MC2 155 lipoprotein LpqH YP_888096.1 3873637 R 246196 CDS YP_888097.1 118473052 4534604 3874246..3874500 1 NC_008596.1 hypothetical protein 3874500 4534604 MSMEG_3804 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888097.1 3874246 D 246196 CDS YP_888098.1 118467348 4534707 3874504..3875688 1 NC_008596.1 hypothetical protein 3875688 4534707 MSMEG_3806 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888098.1 3874504 D 246196 CDS YP_888099.1 118473792 4531270 complement(3875678..3876454) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; oxidoreductase, short chain dehydrogenase/reductase 3876454 4531270 MSMEG_3805 Mycobacterium smegmatis str. MC2 155 oxidoreductase, short chain dehydrogenase/reductase YP_888099.1 3875678 R 246196 CDS YP_888100.1 118472015 4533616 3876491..3877093 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3877093 4533616 MSMEG_3807 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_888100.1 3876491 D 246196 CDS YP_888101.1 118470114 4534949 3877122..3877925 1 NC_008596.1 hypothetical protein 3877925 4534949 MSMEG_3809 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888101.1 3877122 D 246196 CDS YP_888102.1 118471228 4534415 complement(3877922..3880816) 1 NC_008596.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 3880816 uvrA 4534415 uvrA Mycobacterium smegmatis str. MC2 155 excinuclease ABC subunit A YP_888102.1 3877922 R 246196 CDS YP_888103.1 118473814 4531624 3880937..3881641 1 NC_008596.1 identified by match to protein family HMM PF00753; hydrolase 3881641 4531624 MSMEG_3810 Mycobacterium smegmatis str. MC2 155 hydrolase YP_888103.1 3880937 D 246196 CDS YP_888104.1 118472903 4533772 complement(3881645..3882088) 1 NC_008596.1 identified by match to protein family HMM PF00582; universal stress protein family protein 3882088 4533772 MSMEG_3811 Mycobacterium smegmatis str. MC2 155 universal stress protein family protein YP_888104.1 3881645 R 246196 CDS YP_888105.1 118472875 4531359 complement(3882386..3883237) 1 NC_008596.1 identified by match to protein family HMM PF02551; acyl-CoA thioesterase 3883237 4531359 MSMEG_3812 Mycobacterium smegmatis str. MC2 155 acyl-CoA thioesterase YP_888105.1 3882386 R 246196 CDS YP_888106.1 118468334 4532085 complement(3883219..3883497) 1 NC_008596.1 NAD-dependent epimerase/dehydratase 3883497 4532085 MSMEG_3813 Mycobacterium smegmatis str. MC2 155 NAD-dependent epimerase/dehydratase YP_888106.1 3883219 R 246196 CDS YP_888107.1 118470347 4534930 complement(3883930..3885315) 1 NC_008596.1 identified by match to protein family HMM PF07690; drug efflux membrane protein 3885315 4534930 MSMEG_3815 Mycobacterium smegmatis str. MC2 155 drug efflux membrane protein YP_888107.1 3883930 R 246196 CDS YP_888108.1 118472594 4536872 complement(3885360..3887570) 1 NC_008596.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 3887570 uvrB 4536872 uvrB Mycobacterium smegmatis str. MC2 155 excinuclease ABC subunit B YP_888108.1 3885360 R 246196 CDS YP_888109.1 118473328 4530987 3887653..3888093 1 NC_008596.1 identified by match to protein family HMM PF04167; hypothetical protein 3888093 4530987 MSMEG_3817 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888109.1 3887653 D 246196 CDS YP_888110.1 118473184 4533301 3888141..3888686 1 NC_008596.1 hypothetical protein 3888686 4533301 MSMEG_3819 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888110.1 3888141 D 246196 CDS YP_888111.1 118471296 4532190 complement(3888683..3889576) 1 NC_008596.1 identified by match to protein family HMM PF04960; thermolabile glutaminase 3889576 4532190 MSMEG_3818 Mycobacterium smegmatis str. MC2 155 thermolabile glutaminase YP_888111.1 3888683 R 246196 CDS YP_888112.1 118473202 4533319 3889571..3889792 1 NC_008596.1 hypothetical protein 3889792 4533319 MSMEG_3820 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888112.1 3889571 D 246196 CDS YP_888113.1 118470164 4534342 3889800..3891341 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 3891341 4534342 MSMEG_3821 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_888113.1 3889800 D 246196 CDS YP_888114.1 118470971 4534543 complement(3891418..3892152) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF02082; match to protein family HMM PF07729; GntR family transcriptional regulator 3892152 4534543 MSMEG_3822 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_888114.1 3891418 R 246196 CDS YP_888115.1 118468018 4533099 3892337..3893056 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; 3-oxoacyl-ACP reductase 3893056 4533099 MSMEG_3823 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_888115.1 3892337 D 246196 CDS YP_888116.1 118471060 4537133 3893053..3894336 1 NC_008596.1 identified by match to protein family HMM PF06545; hypothetical protein 3894336 4537133 MSMEG_3824 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888116.1 3893053 D 246196 CDS YP_888117.1 118472688 4531656 3894333..3895127 1 NC_008596.1 identified by match to protein family HMM PF00106; 3-oxoacyl-ACP reductase 3895127 4531656 MSMEG_3825 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_888117.1 3894333 D 246196 CDS YP_888118.1 118468922 4537456 3895124..3896194 1 NC_008596.1 hypothetical protein 3896194 4537456 MSMEG_3826 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888118.1 3895124 D 246196 CDS YP_888119.1 118473640 4533508 3896187..3897479 1 NC_008596.1 identified by match to protein family HMM PF00120; glutamine synthetase 3897479 4533508 MSMEG_3827 Mycobacterium smegmatis str. MC2 155 glutamine synthetase YP_888119.1 3896187 D 246196 CDS YP_888120.1 118468147 4532690 3897476..3898855 1 NC_008596.1 identified by match to protein family HMM PF00120; glutamine synthetase 3898855 4532690 MSMEG_3828 Mycobacterium smegmatis str. MC2 155 glutamine synthetase YP_888120.1 3897476 D 246196 CDS YP_888121.1 118472854 4537450 3898899..3899843 1 NC_008596.1 identified by match to protein family HMM PF07859; esterase 3899843 4537450 MSMEG_3829 Mycobacterium smegmatis str. MC2 155 esterase YP_888121.1 3898899 D 246196 CDS YP_888122.1 118471793 4536325 3899840..3900568 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; 3-oxoacyl-ACP reductase 3900568 4536325 MSMEG_3830 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_888122.1 3899840 D 246196 CDS YP_888123.1 118469932 4535843 3900662..3902119 1 NC_008596.1 4-hydroxyacetophenone monooxygenase 3902119 4535843 MSMEG_3832 Mycobacterium smegmatis str. MC2 155 4-hydroxyacetophenone monooxygenase YP_888123.1 3900662 D 246196 CDS YP_888124.1 118472813 4536667 complement(3903380..3904819) 1 NC_008596.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 3904819 rpsA 4536667 rpsA Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S1 YP_888124.1 3903380 R 246196 CDS YP_888125.1 118469512 4536715 complement(3905025..3905606) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3905606 4536715 MSMEG_3834 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_888125.1 3905025 R 246196 CDS YP_888126.1 118469569 4531443 complement(3905603..3905764) 1 NC_008596.1 hypothetical protein 3905764 4531443 MSMEG_3835 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888126.1 3905603 R 246196 CDS YP_888127.1 118470610 4532113 complement(3905761..3906219) 1 NC_008596.1 hypothetical protein 3906219 4532113 MSMEG_3836 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888127.1 3905761 R 246196 CDS YP_888128.1 118471344 4533228 3906374..3907534 1 NC_008596.1 integral membrane protein 3907534 4533228 MSMEG_3838 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_888128.1 3906374 D 246196 CDS YP_888129.1 118467635 4534210 complement(3907516..3908757) 1 NC_008596.1 hypothetical protein 3908757 4534210 MSMEG_3837 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888129.1 3907516 R 246196 CDS YP_888130.1 118469541 4537115 complement(3908769..3911495) 1 NC_008596.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 3911495 4537115 MSMEG_3839 Mycobacterium smegmatis str. MC2 155 DNA polymerase I YP_888130.1 3908769 R 246196 CDS YP_888131.1 118469295 4532634 complement(3911506..3912411) 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 3912411 4532634 MSMEG_3840 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_888131.1 3911506 R 246196 CDS YP_888132.1 118471804 4536336 3912482..3913630 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01494; hypothetical protein 3913630 4536336 MSMEG_3841 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888132.1 3912482 D 246196 CDS YP_888133.1 118467932 4533411 3913627..3914298 1 NC_008596.1 esterase 3914298 4533411 MSMEG_3842 Mycobacterium smegmatis str. MC2 155 esterase YP_888133.1 3913627 D 246196 CDS YP_888134.1 118470514 4537568 3914357..3914806 1 NC_008596.1 identified by match to protein family HMM PF01796; hypothetical protein 3914806 4537568 MSMEG_3843 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888134.1 3914357 D 246196 CDS YP_888135.1 118472052 4535398 3914803..3916005 1 NC_008596.1 lipid-transfer protein 3916005 4535398 MSMEG_3844 Mycobacterium smegmatis str. MC2 155 lipid-transfer protein YP_888135.1 3914803 D 246196 CDS YP_888136.1 118469743 4532028 3916139..3916366 1 NC_008596.1 identified by match to protein family HMM PF02594; hypothetical protein 3916366 4532028 MSMEG_3845 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888136.1 3916139 D 246196 CDS YP_888137.1 118470079 4532953 complement(3916414..3918405) 1 NC_008596.1 identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein 3918405 4532953 MSMEG_3846 Mycobacterium smegmatis str. MC2 155 phosphotransferase enzyme family protein YP_888137.1 3916414 R 246196 CDS YP_888138.1 118472859 4537455 complement(3918460..3920418) 1 NC_008596.1 catalyzes the formation of phenylacetaldehyde from 2-phenylethylamine; tyramine oxidase 3920418 tynA 4537455 tynA Mycobacterium smegmatis str. MC2 155 tyramine oxidase YP_888138.1 3918460 R 246196 CDS YP_888139.1 118473129 4531190 complement(3920451..3921959) 1 NC_008596.1 identified by match to protein family HMM PF00135; para-nitrobenzyl esterase 3921959 4531190 MSMEG_3848 Mycobacterium smegmatis str. MC2 155 para-nitrobenzyl esterase YP_888139.1 3920451 R 246196 CDS YP_888140.1 118470604 4532107 3921789..3922064 1 NC_008596.1 hypothetical protein 3922064 4532107 MSMEG_3849 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888140.1 3921789 D 246196 CDS YP_888141.1 118467341 4534700 3922049..3922738 1 NC_008596.1 LppI protein 3922738 4534700 MSMEG_3851 Mycobacterium smegmatis str. MC2 155 LppI protein YP_888141.1 3922049 D 246196 CDS YP_888142.1 118468503 4535484 complement(3922735..3923841) 1 NC_008596.1 identified by similarity to GB:AAB82564.1; match to protein family HMM PF00296; alkanesulfonate monooxygenase 3923841 4535484 MSMEG_3850 Mycobacterium smegmatis str. MC2 155 alkanesulfonate monooxygenase YP_888142.1 3922735 R 246196 CDS YP_888143.1 118470312 4535190 complement(3923853..3924875) 1 NC_008596.1 identified by match to protein family HMM TIGR01728; aliphatic sulfonate binding protein 3924875 4535190 MSMEG_3852 Mycobacterium smegmatis str. MC2 155 aliphatic sulfonate binding protein YP_888143.1 3923853 R 246196 CDS YP_888144.1 118472209 4530867 complement(3924920..3925657) 1 NC_008596.1 identified by match to protein family HMM PF00005; aliphatic sulfonates transport ATP-binding protein SsuB 3925657 4530867 MSMEG_3853 Mycobacterium smegmatis str. MC2 155 aliphatic sulfonates transport ATP-binding protein SsuB YP_888144.1 3924920 R 246196 CDS YP_888145.1 118469424 4534320 complement(3925654..3926445) 1 NC_008596.1 identified by match to protein family HMM PF00528; aliphatic sulfonates transport permease SsuC 3926445 4534320 MSMEG_3854 Mycobacterium smegmatis str. MC2 155 aliphatic sulfonates transport permease SsuC YP_888145.1 3925654 R 246196 CDS YP_888146.1 118473881 4531129 complement(3926606..3927340) 1 NC_008596.1 hypothetical protein 3927340 4531129 MSMEG_3855 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888146.1 3926606 R 246196 CDS YP_888147.1 118469545 4537119 complement(3927427..3928698) 1 NC_008596.1 identified by match to protein family HMM PF00486; match to protein family HMM PF00561; CadC family transcriptional regulator 3928698 4537119 MSMEG_3856 Mycobacterium smegmatis str. MC2 155 CadC family transcriptional regulator YP_888147.1 3927427 R 246196 CDS YP_888148.1 118472162 4535688 complement(3928773..3929126) 1 NC_008596.1 hypothetical protein 3929126 4535688 MSMEG_3857 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888148.1 3928773 R 246196 CDS YP_888149.1 118471912 4536213 3929241..3929594 1 NC_008596.1 hypothetical protein 3929594 4536213 MSMEG_3858 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888149.1 3929241 D 246196 CDS YP_888150.1 118470328 4535206 complement(3929678..3930475) 1 NC_008596.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 3930475 4535206 MSMEG_3859 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_888150.1 3929678 R 246196 CDS YP_888151.1 118473379 4536624 complement(3930485..3932332) 1 NC_008596.1 identified by match to protein family HMM PF00795; match to protein family HMM TIGR00546; polyprenol-monophosphomannose synthase Ppm1 3932332 4536624 MSMEG_3860 Mycobacterium smegmatis str. MC2 155 polyprenol-monophosphomannose synthase Ppm1 YP_888151.1 3930485 R 246196 CDS YP_888152.1 118470881 4537186 complement(3932325..3933917) 1 NC_008596.1 identified by match to protein family HMM PF07969; amidohydrolase 3933917 4537186 MSMEG_3861 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_888152.1 3932325 R 246196 CDS YP_888153.1 118471226 4534413 complement(3933944..3934450) 1 NC_008596.1 F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA protein 3934450 fxsA 4534413 fxsA Mycobacterium smegmatis str. MC2 155 FxsA protein YP_888153.1 3933944 R 246196 CDS YP_888154.1 118467868 4532890 complement(3934505..3934897) 1 NC_008596.1 identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 3934897 4532890 MSMEG_3863 Mycobacterium smegmatis str. MC2 155 pyridoxamine 5'-phosphate oxidase YP_888154.1 3934505 R 246196 CDS YP_888155.1 118470146 4531705 complement(3934939..3938574) 1 NC_008596.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN 3938574 cobN 4531705 cobN Mycobacterium smegmatis str. MC2 155 cobaltochelatase subunit CobN YP_888155.1 3934939 R 246196 CDS YP_888156.1 118469181 4534288 3938659..3938871 1 NC_008596.1 hypothetical protein 3938871 4534288 MSMEG_3865 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888156.1 3938659 D 246196 CDS YP_888157.1 118469609 4531581 complement(3938878..3939354) 1 NC_008596.1 hypothetical protein 3939354 4531581 MSMEG_3866 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888157.1 3938878 R 246196 CDS YP_888158.1 118471031 4534487 complement(3939351..3941570) 1 NC_008596.1 identified by match to protein family HMM PF01882; match to protein family HMM PF07726; match to protein family HMM PF07728; ATPase AAA 3941570 4534487 MSMEG_3867 Mycobacterium smegmatis str. MC2 155 ATPase AAA YP_888158.1 3939351 R 246196 CDS YP_888159.1 118472541 4532668 complement(3941567..3942052) 1 NC_008596.1 hypothetical protein 3942052 4532668 MSMEG_3868 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888159.1 3941567 R 246196 CDS YP_888160.1 118468107 4535605 complement(3942049..3942978) 1 NC_008596.1 hypothetical protein 3942978 4535605 MSMEG_3869 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888160.1 3942049 R 246196 CDS YP_888161.1 118473299 4535170 3943094..3943993 1 NC_008596.1 identified by match to protein family HMM PF02668; alpha-ketoglutarate-dependent taurine dioxygenase 3943993 4535170 MSMEG_3870 Mycobacterium smegmatis str. MC2 155 alpha-ketoglutarate-dependent taurine dioxygenase YP_888161.1 3943094 D 246196 CDS YP_888162.1 118467354 4534713 3944015..3945133 1 NC_008596.1 identified by match to protein family HMM PF03460; match to protein family HMM TIGR02435; precorrin-3B synthase 3945133 cobG 4534713 cobG Mycobacterium smegmatis str. MC2 155 precorrin-3B synthase YP_888162.1 3944015 D 246196 CDS YP_888163.1 118468458 4536906 3945143..3945769 1 NC_008596.1 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase 3945769 cobH 4536906 cobH Mycobacterium smegmatis str. MC2 155 precorrin-8X methylmutase YP_888163.1 3945143 D 246196 CDS YP_888164.1 118470330 4534913 3945766..3947277 1 NC_008596.1 identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466; match to protein family HMM TIGR01467; cobalamin biosynthesis protein cobIJ 3947277 4534913 MSMEG_3873 Mycobacterium smegmatis str. MC2 155 cobalamin biosynthesis protein cobIJ YP_888164.1 3945766 D 246196 CDS YP_888165.1 118472195 4530853 3947354..3947998 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3947998 4530853 MSMEG_3874 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_888165.1 3947354 D 246196 CDS YP_888166.1 118471249 4531525 3947995..3949062 1 NC_008596.1 identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein 3949062 4531525 MSMEG_3876 Mycobacterium smegmatis str. MC2 155 phosphotransferase enzyme family protein YP_888166.1 3947995 D 246196 CDS YP_888167.1 118471787 4536358 complement(3949043..3949798) 1 NC_008596.1 CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 3949798 cobK 4536358 cobK Mycobacterium smegmatis str. MC2 155 cobalt-precorrin-6x reductase YP_888167.1 3949043 R 246196 CDS YP_888168.1 118467827 4534578 complement(3949795..3950550) 1 NC_008596.1 identified by match to protein family HMM PF00590; match to protein family HMM TIGR01465; precorrin-4 C(11)-methyltransferase 3950550 cobM 4534578 cobM Mycobacterium smegmatis str. MC2 155 precorrin-4 C(11)-methyltransferase YP_888168.1 3949795 R 246196 CDS YP_888169.1 118470659 4534668 complement(3950547..3951731) 1 NC_008596.1 identified by match to protein family HMM PF00590; match to protein family HMM TIGR02467; match to protein family HMM TIGR02469; precorrin-6Y C5,15-methyltransferase 3951731 cobL 4534668 cobL Mycobacterium smegmatis str. MC2 155 precorrin-6Y C5,15-methyltransferase YP_888169.1 3950547 R 246196 CDS YP_888170.1 118471831 4536285 complement(3951760..3952518) 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 3952518 4536285 MSMEG_3879 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_888170.1 3951760 R 246196 CDS YP_888171.1 118473289 4535551 3952554..3952973 1 NC_008596.1 identified by match to protein family HMM PF01243; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3952973 4535551 MSMEG_3880 Mycobacterium smegmatis str. MC2 155 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_888171.1 3952554 D 246196 CDS YP_888172.1 118472395 4531805 complement(3952974..3954101) 1 NC_008596.1 identified by match to protein family HMM PF00557; proline dipeptidase 3954101 4531805 MSMEG_3881 Mycobacterium smegmatis str. MC2 155 proline dipeptidase YP_888172.1 3952974 R 246196 CDS YP_888173.1 118470575 4531518 complement(3954112..3954516) 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase 3954516 4531518 MSMEG_3882 Mycobacterium smegmatis str. MC2 155 glyoxalase YP_888173.1 3954112 R 246196 CDS YP_888174.1 118469848 4532739 3954552..3955568 1 NC_008596.1 identified by match to protein family HMM PF01367; match to protein family HMM PF02739; 5'-3' exonuclease 3955568 4532739 MSMEG_3883 Mycobacterium smegmatis str. MC2 155 5'-3' exonuclease YP_888174.1 3954552 D 246196 CDS YP_888175.1 118473777 4535134 complement(3955575..3956438) 1 NC_008596.1 hypothetical protein 3956438 4535134 MSMEG_3884 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888175.1 3955575 R 246196 CDS YP_888176.1 118470951 4533687 complement(3956438..3959176) 1 NC_008596.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; match to protein family HMM PF08148; DEAD/DEAH box helicase 3959176 4533687 MSMEG_3885 Mycobacterium smegmatis str. MC2 155 DEAD/DEAH box helicase YP_888176.1 3956438 R 246196 CDS YP_888177.1 118471184 4534970 complement(3959166..3960119) 1 NC_008596.1 identified by match to protein family HMM PF00902; match to protein family HMM TIGR00945; twin arginine-targeting protein translocase TatC 3960119 tatC 4534970 tatC Mycobacterium smegmatis str. MC2 155 twin arginine-targeting protein translocase TatC YP_888177.1 3959166 R 246196 CDS YP_888178.1 118472143 4532480 complement(3960196..3960441) 1 NC_008596.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase A 3960441 tatA 4532480 tatA Mycobacterium smegmatis str. MC2 155 twin arginine translocase A YP_888178.1 3960196 R 246196 CDS YP_888179.1 118472326 4532914 complement(3960513..3961469) 1 NC_008596.1 hypothetical protein 3961469 4532914 MSMEG_3888 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888179.1 3960513 R 246196 CDS YP_888180.1 118470135 4534506 complement(3962479..3963837) 1 NC_008596.1 identified by match to protein family HMM PF03136; match to protein family HMM PF03316; proteasome component 3963837 4534506 MSMEG_3890 Mycobacterium smegmatis str. MC2 155 proteasome component YP_888180.1 3962479 R 246196 CDS YP_888181.1 118472668 4535088 3963990..3964871 1 NC_008596.1 identified by match to protein family HMM PF00561; hydrolase 3964871 4535088 MSMEG_3891 Mycobacterium smegmatis str. MC2 155 hydrolase YP_888181.1 3963990 D 246196 CDS YP_888182.1 118470754 4533657 3964940..3965479 1 NC_008596.1 hypothetical protein 3965479 4533657 MSMEG_3892 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888182.1 3964940 D 246196 CDS YP_888183.1 118472502 4533732 3965476..3966558 1 NC_008596.1 hypothetical protein 3966558 4533732 MSMEG_3893 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888183.1 3965476 D 246196 CDS YP_888184.1 118468612 4535010 complement(3966564..3967304) 1 NC_008596.1 identified by match to protein family HMM PF00227; proteasome subunit alpha 3967304 4535010 MSMEG_3894 Mycobacterium smegmatis str. MC2 155 proteasome subunit alpha YP_888184.1 3966564 R 246196 CDS YP_888185.1 118468051 4534165 complement(3967301..3968143) 1 NC_008596.1 identified by match to protein family HMM PF00227; proteasome subunit beta 3968143 4534165 MSMEG_3895 Mycobacterium smegmatis str. MC2 155 proteasome subunit beta YP_888185.1 3967301 R 246196 CDS YP_888186.1 118472672 4532937 complement(3968209..3968403) 1 NC_008596.1 identified by match to protein family HMM PF05639; hypothetical protein 3968403 4532937 MSMEG_3896 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888186.1 3968209 R 246196 CDS YP_888187.1 118469231 4535367 complement(3968511..3970007) 1 NC_008596.1 identified by match to protein family HMM PF03136; match to protein family HMM PF03316; proteasome component 3970007 4535367 MSMEG_3897 Mycobacterium smegmatis str. MC2 155 proteasome component YP_888187.1 3968511 R 246196 CDS YP_888188.1 118469035 4530887 complement(3970017..3970934) 1 NC_008596.1 identified by match to protein family HMM PF05721; match to protein family HMM TIGR02408; ectoine hydroxylase 3970934 thpD 4530887 thpD Mycobacterium smegmatis str. MC2 155 ectoine hydroxylase YP_888188.1 3970017 R 246196 CDS YP_888189.1 118473838 4531992 complement(3970964..3971356) 1 NC_008596.1 N-acetyldiaminobutyrate dehydratase; catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha,gamma-diaminobutyric acid; L-ectoine synthase 3971356 ectC 4531992 ectC Mycobacterium smegmatis str. MC2 155 L-ectoine synthase YP_888189.1 3970964 R 246196 CDS YP_888190.1 118467826 4534577 complement(3971368..3972654) 1 NC_008596.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; diaminobutyrate--2-oxoglutarate aminotransferase 3972654 ectB 4534577 ectB Mycobacterium smegmatis str. MC2 155 diaminobutyrate--2-oxoglutarate aminotransferase YP_888190.1 3971368 R 246196 CDS YP_888191.1 118472652 4535072 complement(3972734..3973267) 1 NC_008596.1 identified by match to protein family HMM PF00583; match to protein family HMM TIGR02406; L-2,4-diaminobutyric acid acetyltransferase 3973267 ectA 4535072 ectA Mycobacterium smegmatis str. MC2 155 L-2,4-diaminobutyric acid acetyltransferase YP_888191.1 3972734 R 246196 CDS YP_888192.1 118470801 4536085 complement(3974235..3976076) 1 NC_008596.1 identified by match to protein family HMM PF00004; ATPase AAA 3976076 4536085 MSMEG_3902 Mycobacterium smegmatis str. MC2 155 ATPase AAA YP_888192.1 3974235 R 246196 CDS YP_888193.1 118470273 4537534 3976222..3976725 1 NC_008596.1 low molecular weight antigen MTB12 3976725 4537534 MSMEG_3903 Mycobacterium smegmatis str. MC2 155 low molecular weight antigen MTB12 YP_888193.1 3976222 D 246196 CDS YP_888194.1 118469750 4532035 3976734..3977297 1 NC_008596.1 LppK protein 3977297 4532035 MSMEG_3904 Mycobacterium smegmatis str. MC2 155 LppK protein YP_888194.1 3976734 D 246196 CDS YP_888195.1 118471923 4536224 3977303..3977596 1 NC_008596.1 identified by match to protein family HMM PF04456; hypothetical protein 3977596 4536224 MSMEG_3905 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888195.1 3977303 D 246196 CDS YP_888196.1 118473840 4531994 complement(3977602..3978450) 1 NC_008596.1 tRNA (adenine-N(1)-)-methyltransferase 3978450 4531994 MSMEG_3906 Mycobacterium smegmatis str. MC2 155 tRNA (adenine-N(1)-)-methyltransferase YP_888196.1 3977602 R 246196 CDS YP_888197.1 118469031 4530883 3978534..3979409 1 NC_008596.1 recombinase B 3979409 4530883 MSMEG_3907 Mycobacterium smegmatis str. MC2 155 recombinase B YP_888197.1 3978534 D 246196 CDS YP_888198.1 118467574 4532864 3979406..3980203 1 NC_008596.1 hypothetical protein 3980203 4532864 MSMEG_3908 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888198.1 3979406 D 246196 CDS YP_888199.1 118469071 4537257 3980200..3980706 1 NC_008596.1 hypothetical protein 3980706 4537257 MSMEG_3910 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888199.1 3980200 D 246196 CDS YP_888200.1 118472374 4534764 complement(3980700..3981236) 1 NC_008596.1 identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 3981236 4534764 MSMEG_3909 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888200.1 3980700 R 246196 CDS YP_888201.1 118472477 4533844 complement(3981247..3981558) 1 NC_008596.1 oxidoreductase 3981558 4533844 MSMEG_3911 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_888201.1 3981247 R 246196 CDS YP_888202.1 118468720 4532790 complement(3981603..3982166) 1 NC_008596.1 acetoacetyl-CoA reductase 3982166 4532790 MSMEG_3912 Mycobacterium smegmatis str. MC2 155 acetoacetyl-CoA reductase YP_888202.1 3981603 R 246196 CDS YP_888203.1 118471976 4536162 3982213..3983361 1 NC_008596.1 identified by match to protein family HMM PF00144; beta-lactamase 3983361 4536162 MSMEG_3914 Mycobacterium smegmatis str. MC2 155 beta-lactamase YP_888203.1 3982213 D 246196 CDS YP_888204.1 118467457 4536602 complement(3983780..3984850) 1 NC_008596.1 identified by match to protein family HMM PF00107; NAD-dependent alcohol dehydrogenase 3984850 4536602 MSMEG_3915 Mycobacterium smegmatis str. MC2 155 NAD-dependent alcohol dehydrogenase YP_888204.1 3983780 R 246196 CDS YP_888205.1 118470198 4532492 complement(3984847..3985164) 1 NC_008596.1 hypothetical protein 3985164 4532492 MSMEG_3916 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888205.1 3984847 R 246196 CDS YP_888206.1 118469748 4532033 complement(3985843..3986388) 1 NC_008596.1 hypothetical protein 3986388 4532033 MSMEG_3917 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888206.1 3985843 R 246196 CDS YP_888207.1 118470617 4532975 complement(3986453..3986902) 1 NC_008596.1 hypothetical protein 3986902 4532975 MSMEG_3918 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888207.1 3986453 R 246196 CDS YP_888208.1 118470870 4536802 3987401..3988021 1 NC_008596.1 hypothetical protein 3988021 4536802 MSMEG_3919 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888208.1 3987401 D 246196 CDS YP_888209.1 118472286 4534812 3988011..3988562 1 NC_008596.1 hypothetical protein 3988562 4534812 MSMEG_3920 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888209.1 3988011 D 246196 CDS YP_888210.1 118472654 4535074 3988559..3989284 1 NC_008596.1 hypothetical protein 3989284 4535074 MSMEG_3922 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888210.1 3988559 D 246196 CDS YP_888211.1 118473570 4531004 complement(3989281..3990024) 1 NC_008596.1 hypothetical protein 3990024 4531004 MSMEG_3921 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888211.1 3989281 R 246196 CDS YP_888212.1 118467784 4535705 3990221..3990724 1 NC_008596.1 identified by match to protein family HMM PF04978; hypothetical protein 3990724 4535705 MSMEG_3923 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888212.1 3990221 D 246196 CDS YP_888213.1 118470018 4532757 complement(3990727..3991974) 1 NC_008596.1 identified by match to protein family HMM PF00668; peptide synthetase ScpsB 3991974 4532757 MSMEG_3924 Mycobacterium smegmatis str. MC2 155 peptide synthetase ScpsB YP_888213.1 3990727 R 246196 CDS YP_888214.1 118471426 4532809 3992167..3993123 1 NC_008596.1 identified by match to protein family HMM PF00753; AttM/AiiB family protein 3993123 4532809 MSMEG_3925 Mycobacterium smegmatis str. MC2 155 AttM/AiiB family protein YP_888214.1 3992167 D 246196 CDS YP_888215.1 118471992 4536139 complement(3993256..3996024) 1 NC_008596.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; cation-transporting ATPase Pma1 3996024 4536139 MSMEG_3926 Mycobacterium smegmatis str. MC2 155 cation-transporting ATPase Pma1 YP_888215.1 3993256 R 246196 CDS YP_888216.1 118473490 4532123 complement(3996059..3996526) 1 NC_008596.1 identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072; peptidase M52, hydrogen uptake protein 3996526 4532123 MSMEG_3927 Mycobacterium smegmatis str. MC2 155 peptidase M52, hydrogen uptake protein YP_888216.1 3996059 R 246196 CDS YP_888217.1 118473853 4533553 complement(3996523..3997815) 1 NC_008596.1 identified by match to protein family HMM PF00374; [NiFe] hydrogenase subunit alpha 3997815 4533553 MSMEG_3928 Mycobacterium smegmatis str. MC2 155 [NiFe] hydrogenase subunit alpha YP_888217.1 3996523 R 246196 CDS YP_888218.1 118467730 4534013 complement(3997812..3998570) 1 NC_008596.1 identified by match to protein family HMM PF01058; [NiFe] hydrogenase subunit delta 3998570 4534013 MSMEG_3929 Mycobacterium smegmatis str. MC2 155 [NiFe] hydrogenase subunit delta YP_888218.1 3997812 R 246196 CDS YP_888219.1 118469718 4537592 complement(3998571..3999386) 1 NC_008596.1 identified by match to protein family HMM PF00175; [NiFe] hydrogenase subunit gamma 3999386 4537592 MSMEG_3930 Mycobacterium smegmatis str. MC2 155 [NiFe] hydrogenase subunit gamma YP_888219.1 3998571 R 246196 CDS YP_888220.1 118470838 4532525 complement(3999400..4000485) 1 NC_008596.1 identified by match to protein family HMM PF00037; [NiFe] hydrogenase subunit beta 4000485 4532525 MSMEG_3931 Mycobacterium smegmatis str. MC2 155 [NiFe] hydrogenase subunit beta YP_888220.1 3999400 R 246196 CDS YP_888221.1 118472747 4531936 complement(4000508..4000945) 1 NC_008596.1 identified by match to protein family HMM PF00011; hypothetical protein 4000945 4531936 MSMEG_3932 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888221.1 4000508 R 246196 CDS YP_888222.1 118471419 4532802 4001317..4003635 1 NC_008596.1 identified by match to protein family HMM PF00391; match to protein family HMM PF01326; match to protein family HMM PF02896; phosphoenolpyruvate synthase 4003635 4532802 MSMEG_3934 Mycobacterium smegmatis str. MC2 155 phosphoenolpyruvate synthase YP_888222.1 4001317 D 246196 CDS YP_888223.1 118469250 4531542 complement(4003514..4004869) 1 NC_008596.1 identified by match to protein family HMM PF03007; hypothetical protein 4004869 4531542 MSMEG_3933 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888223.1 4003514 R 246196 CDS YP_888224.1 118468280 4535767 complement(4004936..4005712) 1 NC_008596.1 hypothetical protein 4005712 4535767 MSMEG_3935 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888224.1 4004936 R 246196 CDS YP_888225.1 118471095 4535860 complement(4005847..4006746) 1 NC_008596.1 identified by match to protein family HMM PF00582; universal stress protein family protein 4006746 4535860 MSMEG_3936 Mycobacterium smegmatis str. MC2 155 universal stress protein family protein YP_888225.1 4005847 R 246196 CDS YP_888226.1 118468400 4534789 complement(4006743..4007213) 1 NC_008596.1 hypothetical protein 4007213 4534789 MSMEG_3937 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888226.1 4006743 R 246196 CDS YP_888227.1 118467723 4534006 4006998..4007264 1 NC_008596.1 hypothetical protein 4007264 4534006 MSMEG_3938 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888227.1 4006998 D 246196 CDS YP_888228.1 118469913 4535567 4007445..4008236 1 NC_008596.1 identified by match to protein family HMM PF00582; universal stress protein family protein 4008236 4535567 MSMEG_3939 Mycobacterium smegmatis str. MC2 155 universal stress protein family protein YP_888228.1 4007445 D 246196 CDS YP_888229.1 118469207 4535796 4008412..4009293 1 NC_008596.1 identified by match to protein family HMM PF00582; universal stress protein family protein 4009293 4535796 MSMEG_3940 Mycobacterium smegmatis str. MC2 155 universal stress protein family protein YP_888229.1 4008412 D 246196 CDS YP_888230.1 118471741 4536388 complement(4009310..4010953) 1 NC_008596.1 identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730; GAF family protein 4010953 4536388 MSMEG_3941 Mycobacterium smegmatis str. MC2 155 GAF family protein YP_888230.1 4009310 R 246196 CDS YP_888231.1 118473212 4531062 complement(4011176..4012672) 1 NC_008596.1 hypothetical protein 4012672 4531062 MSMEG_3942 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888231.1 4011176 R 246196 CDS YP_888232.1 118468538 4536089 4012832..4013794 1 NC_008596.1 hypothetical protein 4013794 4536089 MSMEG_3943 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888232.1 4012832 D 246196 CDS YP_888233.1 118468506 4535487 4013788..4014441 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; two component transcriptional regulatory protein devr 4014441 4535487 MSMEG_3944 Mycobacterium smegmatis str. MC2 155 two component transcriptional regulatory protein devr YP_888233.1 4013788 D 246196 CDS YP_888234.1 118467701 4537708 complement(4014443..4015264) 1 NC_008596.1 identified by match to protein family HMM PF00582; universal stress protein family protein 4015264 4537708 MSMEG_3945 Mycobacterium smegmatis str. MC2 155 universal stress protein family protein YP_888234.1 4014443 R 246196 CDS YP_888235.1 118473428 4537415 complement(4015330..4015905) 1 NC_008596.1 transmembrane protein 4015905 4537415 MSMEG_3946 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_888235.1 4015330 R 246196 CDS YP_888236.1 118472027 4534107 4016065..4017468 1 NC_008596.1 identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; acyltransferase 4017468 4534107 MSMEG_3948 Mycobacterium smegmatis str. MC2 155 acyltransferase YP_888236.1 4016065 D 246196 CDS YP_888237.1 118469475 4534449 complement(4017452..4018450) 1 NC_008596.1 identified by match to protein family HMM PF00294; 6-phosphofructokinase 4018450 4534449 MSMEG_3947 Mycobacterium smegmatis str. MC2 155 6-phosphofructokinase YP_888237.1 4017452 R 246196 CDS YP_888238.1 118470699 4532536 4018666..4018917 1 NC_008596.1 hypothetical protein 4018917 4532536 MSMEG_3949 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888238.1 4018666 D 246196 CDS YP_888239.1 118471745 4536392 4019051..4019935 1 NC_008596.1 identified by match to protein family HMM PF00582; universal stress protein family protein 4019935 4536392 MSMEG_3950 Mycobacterium smegmatis str. MC2 155 universal stress protein family protein YP_888239.1 4019051 D 246196 CDS YP_888240.1 118469419 4534315 4020005..4020961 1 NC_008596.1 hypothetical protein 4020961 4534315 MSMEG_3952 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888240.1 4020005 D 246196 CDS YP_888241.1 118467533 4535995 complement(4020929..4021870) 1 NC_008596.1 hypothetical protein 4021870 4535995 MSMEG_3951 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888241.1 4020929 R 246196 CDS YP_888242.1 118469413 4531966 complement(4021891..4022955) 1 NC_008596.1 hypothetical protein 4022955 4531966 MSMEG_3953 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888242.1 4021891 R 246196 CDS YP_888243.1 118469950 4530913 4023070..4025790 1 NC_008596.1 identified by match to protein family HMM PF03632; match to protein family HMM PF03633; match to protein family HMM PF03636; trehalose 6-phosphate phosphorylase 4025790 4530913 MSMEG_3954 Mycobacterium smegmatis str. MC2 155 trehalose 6-phosphate phosphorylase YP_888243.1 4023070 D 246196 CDS YP_888244.1 118471183 4534969 complement(4025793..4026797) 1 NC_008596.1 hypothetical protein 4026797 4534969 MSMEG_3955 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888244.1 4025793 R 246196 CDS YP_888245.1 118472048 4535394 complement(4026826..4027116) 1 NC_008596.1 alkylhydroperoxidase 4027116 4535394 MSMEG_3956 Mycobacterium smegmatis str. MC2 155 alkylhydroperoxidase YP_888245.1 4026826 R 246196 CDS YP_888246.1 118473150 4532591 complement(4027120..4028703) 1 NC_008596.1 identified by match to protein family HMM PF01844; match to protein family HMM PF02720; hypothetical protein 4028703 4532591 MSMEG_3957 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888246.1 4027120 R 246196 CDS YP_888247.1 118468372 4532921 complement(4028808..4029335) 1 NC_008596.1 glyoxalase/bleomycin resistance protein/dioxygenase 4029335 4532921 MSMEG_3958 Mycobacterium smegmatis str. MC2 155 glyoxalase/bleomycin resistance protein/dioxygenase YP_888247.1 4028808 R 246196 CDS YP_888248.1 118473029 4532350 4029539..4030411 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptional regulator 4030411 4532350 MSMEG_3959 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_888248.1 4029539 D 246196 CDS YP_888249.1 118468225 4537040 4030440..4030958 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 4030958 4537040 MSMEG_3960 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_888249.1 4030440 D 246196 CDS YP_888250.1 118469412 4531965 4030991..4031584 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 4031584 4531965 MSMEG_3961 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_888250.1 4030991 D 246196 CDS YP_888251.1 118472035 4534117 complement(4031670..4032854) 1 NC_008596.1 identified by match to protein family HMM PF01070; lactate 2-monooxygenase 4032854 4534117 MSMEG_3962 Mycobacterium smegmatis str. MC2 155 lactate 2-monooxygenase YP_888251.1 4031670 R 246196 CDS YP_888252.1 118468769 4535660 complement(4033091..4033297) 1 NC_008596.1 hypothetical protein 4033297 4535660 MSMEG_3963 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888252.1 4033091 R 246196 CDS YP_888253.1 118473201 4533318 4033163..4034893 1 NC_008596.1 catalyzes the formation of acetate from pyruvate; pyruvate dehydrogenase 4034893 4533318 MSMEG_3964 Mycobacterium smegmatis str. MC2 155 pyruvate dehydrogenase YP_888253.1 4033163 D 246196 CDS YP_888254.1 118473487 4532120 4034909..4035196 1 NC_008596.1 hypothetical protein 4035196 4532120 MSMEG_3965 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888254.1 4034909 D 246196 CDS YP_888255.1 118473486 4532119 4035225..4035536 1 NC_008596.1 hypothetical protein 4035536 4532119 MSMEG_3966 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888255.1 4035225 D 246196 CDS YP_888256.1 118473134 4531195 complement(4035550..4036224) 1 NC_008596.1 identified by match to protein family HMM PF02082; match to protein family HMM PF08220; TonB-dependent receptor 4036224 4531195 MSMEG_3967 Mycobacterium smegmatis str. MC2 155 TonB-dependent receptor YP_888256.1 4035550 R 246196 CDS YP_888257.1 118467398 4535819 4035904..4036752 1 NC_008596.1 hypothetical protein 4036752 4535819 MSMEG_3971 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888257.1 4035904 D 246196 CDS YP_888258.1 118473650 4533518 complement(4036208..4036456) 1 NC_008596.1 hypothetical protein 4036456 4533518 MSMEG_3968 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888258.1 4036208 R 246196 CDS YP_888259.1 118472526 4534725 complement(4036264..4036668) 1 NC_008596.1 hypothetical protein 4036668 4534725 MSMEG_3969 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888259.1 4036264 R 246196 CDS YP_888260.1 118469869 4536560 complement(4036718..4038121) 1 NC_008596.1 identified by match to protein family HMM PF01425; glutamyl-tRNA(Gln) amidotransferase subunit A 4038121 4536560 MSMEG_3970 Mycobacterium smegmatis str. MC2 155 glutamyl-tRNA(Gln) amidotransferase subunit A YP_888260.1 4036718 R 246196 CDS YP_888261.1 118470783 4531147 4038226..4039044 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 4039044 4531147 MSMEG_3972 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_888261.1 4038226 D 246196 CDS YP_888262.1 118471264 4532138 complement(4039051..4041021) 1 NC_008596.1 identified by match to protein family HMM PF02538; N-methylhydantoinase 4041021 4532138 MSMEG_3973 Mycobacterium smegmatis str. MC2 155 N-methylhydantoinase YP_888262.1 4039051 R 246196 CDS YP_888263.1 118468650 4533582 4043213..4044805 1 NC_008596.1 identified by match to protein family HMM PF07905; regulatory protein 4044805 4533582 MSMEG_3975 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_888263.1 4043213 D 246196 CDS YP_888264.1 118470010 4532748 complement(4045146..4045796) 1 NC_008596.1 identified by match to protein family HMM PF00440; DNA-binding protein 4045796 4532748 MSMEG_3976 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_888264.1 4045146 R 246196 CDS YP_888265.1 118469139 4532555 4045998..4046852 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 4046852 4532555 MSMEG_3977 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888265.1 4045998 D 246196 CDS YP_888266.1 118473855 4533555 4046936..4048078 1 NC_008596.1 identified by match to protein family HMM PF00144; beta-lactamase 4048078 ampC 4533555 ampC Mycobacterium smegmatis str. MC2 155 beta-lactamase YP_888266.1 4046936 D 246196 CDS YP_888267.1 118473242 4537302 complement(4049025..4049669) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 4049669 4537302 MSMEG_3980 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_888267.1 4049025 R 246196 CDS YP_888268.1 118468976 4533541 complement(4049735..4050916) 1 NC_008596.1 identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F 4050916 4533541 MSMEG_3981 Mycobacterium smegmatis str. MC2 155 L-carnitine dehydratase/bile acid-inducible protein F YP_888268.1 4049735 R 246196 CDS YP_888269.1 118467998 4531318 complement(4050913..4052046) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4052046 4531318 MSMEG_3982 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_888269.1 4050913 R 246196 CDS YP_888270.1 118470933 4533981 4053599..4054810 1 NC_008596.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; transposase IS116/IS110/IS902 4054810 4533981 MSMEG_3984 Mycobacterium smegmatis str. MC2 155 transposase IS116/IS110/IS902 YP_888270.1 4053599 D 246196 CDS YP_888271.1 118471706 4536431 4055023..4056354 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; integral membrane transporter 4056354 4536431 MSMEG_3985 Mycobacterium smegmatis str. MC2 155 integral membrane transporter YP_888271.1 4055023 D 246196 CDS YP_888272.1 118470844 4534299 4056401..4058032 1 NC_008596.1 identified by match to protein family HMM PF00501; acetyl-coenzyme A synthetase 4058032 4534299 MSMEG_3986 Mycobacterium smegmatis str. MC2 155 acetyl-coenzyme A synthetase YP_888272.1 4056401 D 246196 CDS YP_888273.1 118473427 4537414 4058087..4059460 1 NC_008596.1 identified by match to protein family HMM PF00890; match to protein family HMM PF01266; FAD dependent oxidoreductase 4059460 4537414 MSMEG_3987 Mycobacterium smegmatis str. MC2 155 FAD dependent oxidoreductase YP_888273.1 4058087 D 246196 CDS YP_888274.1 118470443 4532234 complement(4059480..4060481) 1 NC_008596.1 identified by match to protein family HMM PF01037; AsnC family transcriptional regulator 4060481 4532234 MSMEG_3988 Mycobacterium smegmatis str. MC2 155 AsnC family transcriptional regulator YP_888274.1 4059480 R 246196 CDS YP_888275.1 118469546 4537121 4060590..4061819 1 NC_008596.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; peptidase M20D, amidohydrolase 4061819 4537121 MSMEG_3989 Mycobacterium smegmatis str. MC2 155 peptidase M20D, amidohydrolase YP_888275.1 4060590 D 246196 CDS YP_888276.1 118471915 4536216 4061819..4063096 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; transporter 4063096 4536216 MSMEG_3990 Mycobacterium smegmatis str. MC2 155 transporter YP_888276.1 4061819 D 246196 CDS YP_888277.1 118468776 4535667 4063093..4063911 1 NC_008596.1 identified by match to protein family HMM PF04199; cyclase 4063911 4535667 MSMEG_3991 Mycobacterium smegmatis str. MC2 155 cyclase YP_888277.1 4063093 D 246196 CDS YP_888278.1 118472639 4537658 complement(4063918..4065294) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; integral membrane transporter 4065294 4537658 MSMEG_3992 Mycobacterium smegmatis str. MC2 155 integral membrane transporter YP_888278.1 4063918 R 246196 CDS YP_888279.1 118468907 4537069 complement(4065447..4066229) 1 NC_008596.1 identified by match to protein family HMM PF01177; Asp/Glu racemase 4066229 4537069 MSMEG_3993 Mycobacterium smegmatis str. MC2 155 Asp/Glu racemase YP_888279.1 4065447 R 246196 CDS YP_888280.1 118472561 4534145 complement(4066219..4067007) 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 4067007 4534145 MSMEG_3994 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_888280.1 4066219 R 246196 CDS YP_888281.1 118473294 4535556 complement(4067064..4068380) 1 NC_008596.1 identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879; N-carbamoyl-L-amino acid amidohydrolase 4068380 4535556 MSMEG_3995 Mycobacterium smegmatis str. MC2 155 N-carbamoyl-L-amino acid amidohydrolase YP_888281.1 4067064 R 246196 CDS YP_888282.1 118471068 4537141 complement(4068425..4069888) 1 NC_008596.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase 4069888 hydA 4537141 hydA Mycobacterium smegmatis str. MC2 155 phenylhydantoinase YP_888282.1 4068425 R 246196 CDS YP_888283.1 118471251 4531527 4070103..4071197 1 NC_008596.1 regulatory protein 4071197 4531527 MSMEG_3997 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_888283.1 4070103 D 246196 CDS YP_888284.1 118472118 4532160 complement(4071433..4072320) 1 NC_008596.1 identified by match to protein family HMM PF00165; match to protein family HMM PF02311; MmsAB operon regulatory protein 4072320 4532160 MSMEG_3998 Mycobacterium smegmatis str. MC2 155 MmsAB operon regulatory protein YP_888284.1 4071433 R 246196 CDS YP_888285.1 118469720 4537594 4072558..4073547 1 NC_008596.1 identified by match to protein family HMM PF00532; ABC transporter periplasmic protein 4073547 4537594 MSMEG_3999 Mycobacterium smegmatis str. MC2 155 ABC transporter periplasmic protein YP_888285.1 4072558 D 246196 CDS YP_888286.1 118467746 4535645 4073608..4075119 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 4075119 4535645 MSMEG_4000 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_888286.1 4073608 D 246196 CDS YP_888287.1 118469684 4536817 4075142..4076146 1 NC_008596.1 identified by match to protein family HMM PF02653; ribose transporter permease RbsC 4076146 4536817 MSMEG_4001 Mycobacterium smegmatis str. MC2 155 ribose transporter permease RbsC YP_888287.1 4075142 D 246196 CDS YP_888288.1 118472386 4531796 4076191..4077273 1 NC_008596.1 identified by match to protein family HMM PF00107; oxidoreductase, zinc-binding dehydrogenase 4077273 4531796 MSMEG_4002 Mycobacterium smegmatis str. MC2 155 oxidoreductase, zinc-binding dehydrogenase YP_888288.1 4076191 D 246196 CDS YP_888289.1 118473374 4536619 4077270..4078223 1 NC_008596.1 hypothetical protein 4078223 4536619 MSMEG_4003 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888289.1 4077270 D 246196 CDS YP_888290.1 118470237 4536756 4078220..4078969 1 NC_008596.1 identified by match to protein family HMM PF00106; 3-oxoacyl-ACP reductase 4078969 4536756 MSMEG_4004 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_888290.1 4078220 D 246196 CDS YP_888291.1 118471286 4532180 4078966..4079841 1 NC_008596.1 calcium-binding protein 4079841 4532180 MSMEG_4005 Mycobacterium smegmatis str. MC2 155 calcium-binding protein YP_888291.1 4078966 D 246196 CDS YP_888292.1 118472670 4532934 complement(4079904..4081382) 1 NC_008596.1 identified by match to protein family HMM PF02954; CdaR family transcriptional regulator 4081382 4532934 MSMEG_4006 Mycobacterium smegmatis str. MC2 155 CdaR family transcriptional regulator YP_888292.1 4079904 R 246196 CDS YP_888293.1 118473620 4531016 4081401..4082390 1 NC_008596.1 identified by match to protein family HMM PF03171; oxidoreductase, 2OG-Fe(II) oxygenase 4082390 4531016 MSMEG_4007 Mycobacterium smegmatis str. MC2 155 oxidoreductase, 2OG-Fe(II) oxygenase YP_888293.1 4081401 D 246196 CDS YP_888294.1 118467435 4535444 4082574..4083587 1 NC_008596.1 identified by match to protein family HMM PF03171; oxidoreductase, 2OG-Fe(II) oxygenase 4083587 4535444 MSMEG_4008 Mycobacterium smegmatis str. MC2 155 oxidoreductase, 2OG-Fe(II) oxygenase YP_888294.1 4082574 D 246196 CDS YP_888295.1 118473879 4531127 4083529..4083852 1 NC_008596.1 identified by match to protein family HMM PF00111; vanillate O-demethylase 4083852 4531127 MSMEG_4009 Mycobacterium smegmatis str. MC2 155 vanillate O-demethylase YP_888295.1 4083529 D 246196 CDS YP_888296.1 118468118 4535616 4083868..4084278 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase 4084278 4535616 MSMEG_4010 Mycobacterium smegmatis str. MC2 155 glyoxalase YP_888296.1 4083868 D 246196 CDS YP_888297.1 118468787 4535305 4084288..4085598 1 NC_008596.1 identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; pyrimidine permease RutG 4085598 4535305 MSMEG_4011 Mycobacterium smegmatis str. MC2 155 pyrimidine permease RutG YP_888297.1 4084288 D 246196 CDS YP_888298.1 118470962 4534534 4085598..4087019 1 NC_008596.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase 4087019 hydA 4534534 hydA Mycobacterium smegmatis str. MC2 155 phenylhydantoinase YP_888298.1 4085598 D 246196 CDS YP_888299.1 118471781 4536352 4087035..4088054 1 NC_008596.1 identified by match to protein family HMM PF00296; oxidoreductase 4088054 4536352 MSMEG_4013 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_888299.1 4087035 D 246196 CDS YP_888300.1 118471032 4536734 4088051..4089346 1 NC_008596.1 identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879; N-carbamoyl-L-amino acid amidohydrolase 4089346 4536734 MSMEG_4014 Mycobacterium smegmatis str. MC2 155 N-carbamoyl-L-amino acid amidohydrolase YP_888300.1 4088051 D 246196 CDS YP_888301.1 118473735 4537340 4089336..4089491 1 NC_008596.1 hypothetical protein 4089491 4537340 MSMEG_4016 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888301.1 4089336 D 246196 CDS YP_888302.1 118473046 4533199 complement(4089371..4089532) 1 NC_008596.1 hypothetical protein 4089532 4533199 MSMEG_4015 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888302.1 4089371 R 246196 CDS YP_888303.1 118469531 4537105 4089488..4089820 1 NC_008596.1 BmyD protein 4089820 4537105 MSMEG_4017 Mycobacterium smegmatis str. MC2 155 BmyD protein YP_888303.1 4089488 D 246196 CDS YP_888304.1 118470478 4536789 complement(4089826..4090581) 1 NC_008596.1 identified by match to protein family HMM PF01909; nucleotidyltransferase domain-containing protein 4090581 4536789 MSMEG_4018 Mycobacterium smegmatis str. MC2 155 nucleotidyltransferase domain-containing protein YP_888304.1 4089826 R 246196 CDS YP_888305.1 118470476 4536787 complement(4090775..4092508) 1 NC_008596.1 identified by match to protein family HMM PF00501; AMP-dependent synthetase/ligase 4092508 4536787 MSMEG_4019 Mycobacterium smegmatis str. MC2 155 AMP-dependent synthetase/ligase YP_888305.1 4090775 R 246196 CDS YP_888306.1 118467818 4534569 complement(4092516..4093307) 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 4093307 4534569 MSMEG_4020 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase/isomerase YP_888306.1 4092516 R 246196 CDS YP_888307.1 118467884 4535259 complement(4093304..4093456) 1 NC_008596.1 hypothetical protein 4093456 4535259 MSMEG_4021 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888307.1 4093304 R 246196 CDS YP_888308.1 118468730 4534258 4093747..4094346 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4094346 4534258 MSMEG_4022 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_888308.1 4093747 D 246196 CDS YP_888309.1 118469738 4532023 complement(4094612..4096099) 1 NC_008596.1 identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; oxidoreductase 4096099 4532023 MSMEG_4023 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_888309.1 4094612 R 246196 CDS YP_888310.1 118467736 4534019 complement(4096520..4097857) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4097857 4534019 MSMEG_4024 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_888310.1 4096520 R 246196 CDS YP_888311.1 118470038 4531653 complement(4097995..4098918) 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 4098918 4531653 MSMEG_4025 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_888311.1 4097995 R 246196 CDS YP_888312.1 118471700 4536423 4099556..4099693 1 NC_008596.1 hypothetical protein 4099693 4536423 MSMEG_4026 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888312.1 4099556 D 246196 CDS YP_888313.1 118471843 4536297 4099750..4100754 1 NC_008596.1 identified by match to protein family HMM PF00107; zinc-containing alcohol dehydrogenase superfamily protein 4100754 4536297 MSMEG_4027 Mycobacterium smegmatis str. MC2 155 zinc-containing alcohol dehydrogenase superfamily protein YP_888313.1 4099750 D 246196 CDS YP_888314.1 118473885 4536580 complement(4100797..4101018) 1 NC_008596.1 hypothetical protein 4101018 4536580 MSMEG_4028 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888314.1 4100797 R 246196 CDS YP_888315.1 118472727 4532355 complement(4101244..4101849) 1 NC_008596.1 identified by match to protein family HMM PF07336; hypothetical protein 4101849 4532355 MSMEG_4029 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888315.1 4101244 R 246196 CDS YP_888316.1 118473782 4535139 4102269..4102760 1 NC_008596.1 identified by match to protein family HMM PF04224; hypothetical protein 4102760 4535139 MSMEG_4030 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888316.1 4102269 D 246196 CDS YP_888317.1 118469792 4535932 4102959..4103162 1 NC_008596.1 hypothetical protein 4103162 4535932 MSMEG_4031 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888317.1 4102959 D 246196 CDS YP_888318.1 118473004 4531296 complement(4103378..4104352) 1 NC_008596.1 identified by match to protein family HMM PF00107; zinc-binding alcohol dehydrogenase 4104352 4531296 MSMEG_4032 Mycobacterium smegmatis str. MC2 155 zinc-binding alcohol dehydrogenase YP_888318.1 4103378 R 246196 CDS YP_888319.1 118468639 4533571 4104476..4105129 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4105129 4533571 MSMEG_4033 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_888319.1 4104476 D 246196 CDS YP_888320.1 118471526 4537237 4105207..4106040 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF05368; match to protein family HMM PF07993; NAD dependent epimerase/dehydratase 4106040 4537237 MSMEG_4034 Mycobacterium smegmatis str. MC2 155 NAD dependent epimerase/dehydratase YP_888320.1 4105207 D 246196 CDS YP_888321.1 118471137 4531824 complement(4106113..4106928) 1 NC_008596.1 citrate synthase 4106928 4531824 MSMEG_4035 Mycobacterium smegmatis str. MC2 155 citrate synthase YP_888321.1 4106113 R 246196 CDS YP_888322.1 118470163 4534341 complement(4106918..4108465) 1 NC_008596.1 identified by match to protein family HMM PF00501; crotonobetaine/carnitine-CoA ligase 4108465 4534341 MSMEG_4036 Mycobacterium smegmatis str. MC2 155 crotonobetaine/carnitine-CoA ligase YP_888322.1 4106918 R 246196 CDS YP_888323.1 118469281 4532251 complement(4108522..4108932) 1 NC_008596.1 hypothetical protein 4108932 4532251 MSMEG_4037 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888323.1 4108522 R 246196 CDS YP_888324.1 118468557 4533691 4109489..4110982 1 NC_008596.1 identified by match to protein family HMM PF00171; vanillin dehydrogenase 4110982 4533691 MSMEG_4038 Mycobacterium smegmatis str. MC2 155 vanillin dehydrogenase YP_888324.1 4109489 D 246196 CDS YP_888325.1 118467520 4535531 4110996..4112135 1 NC_008596.1 identified by match to protein family HMM PF00107; aryl-alcohol dehydrogenase 4112135 4535531 MSMEG_4039 Mycobacterium smegmatis str. MC2 155 aryl-alcohol dehydrogenase YP_888325.1 4110996 D 246196 CDS YP_888326.1 118470141 4531700 4112188..4112853 1 NC_008596.1 identified by match to protein family HMM PF00881; hypothetical protein 4112853 4531700 MSMEG_4040 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888326.1 4112188 D 246196 CDS YP_888327.1 118472466 4533832 4113063..4113947 1 NC_008596.1 identified by match to protein family HMM PF00775; match to protein family HMM PF04444; hydroxyquinol 1,2-dioxygenase 4113947 4533832 MSMEG_4041 Mycobacterium smegmatis str. MC2 155 hydroxyquinol 1,2-dioxygenase YP_888327.1 4113063 D 246196 CDS YP_888328.1 118471885 4536261 4114106..4114864 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 4114864 4536261 MSMEG_4042 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_888328.1 4114106 D 246196 CDS YP_888329.1 118470949 4533685 4114887..4115840 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 4115840 4533685 MSMEG_4043 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_888329.1 4114887 D 246196 CDS YP_888330.1 118472315 4532903 complement(4115906..4117693) 1 NC_008596.1 identified by match to protein family HMM PF01590; GAF domain-containing protein 4117693 4532903 MSMEG_4044 Mycobacterium smegmatis str. MC2 155 GAF domain-containing protein YP_888330.1 4115906 R 246196 CDS YP_888331.1 118467590 4531406 complement(4117738..4118019) 1 NC_008596.1 identified by match to protein family HMM PF02426; muconolactone delta-isomerase 4118019 4531406 MSMEG_4045 Mycobacterium smegmatis str. MC2 155 muconolactone delta-isomerase YP_888331.1 4117738 R 246196 CDS YP_888332.1 118473567 4531001 complement(4118016..4119176) 1 NC_008596.1 identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F 4119176 4531001 MSMEG_4046 Mycobacterium smegmatis str. MC2 155 L-carnitine dehydratase/bile acid-inducible protein F YP_888332.1 4118016 R 246196 CDS YP_888333.1 118467807 4535984 complement(4119176..4120141) 1 NC_008596.1 identified by match to protein family HMM PF00753; dihydropteroate synthase 4120141 4535984 MSMEG_4047 Mycobacterium smegmatis str. MC2 155 dihydropteroate synthase YP_888333.1 4119176 R 246196 CDS YP_888334.1 118469197 4535786 complement(4120239..4121222) 1 NC_008596.1 cyclase 4121222 4535786 MSMEG_4048 Mycobacterium smegmatis str. MC2 155 cyclase YP_888334.1 4120239 R 246196 CDS YP_888335.1 118468218 4537031 complement(4121265..4122713) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; sugar transporter permease 4122713 4537031 MSMEG_4049 Mycobacterium smegmatis str. MC2 155 sugar transporter permease YP_888335.1 4121265 R 246196 CDS YP_888336.1 118471075 4537518 complement(4122773..4123459) 1 NC_008596.1 hypothetical protein 4123459 4537518 MSMEG_4050 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888336.1 4122773 R 246196 CDS YP_888337.1 118473771 4537747 complement(4123604..4123735) 1 NC_008596.1 hypothetical protein 4123735 4537747 MSMEG_4051 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888337.1 4123604 R 246196 CDS YP_888338.1 118468215 4537028 complement(4123732..4123893) 1 NC_008596.1 hypothetical protein 4123893 4537028 MSMEG_4052 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888338.1 4123732 R 246196 CDS YP_888339.1 118467509 4535520 complement(4124109..4126841) 1 NC_008596.1 identified by match to protein family HMM PF00196; transcriptional regulatory protein 4126841 4535520 MSMEG_4053 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_888339.1 4124109 R 246196 CDS YP_888340.1 118470126 4534497 complement(4126850..4126984) 1 NC_008596.1 hypothetical protein 4126984 4534497 MSMEG_4054 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888340.1 4126850 R 246196 CDS YP_888341.1 118468260 4533993 4127253..4128044 1 NC_008596.1 identified by match to protein family HMM PF00106; short-chain dehydrogenase/reductase SDR 4128044 4533993 MSMEG_4055 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase SDR YP_888341.1 4127253 D 246196 CDS YP_888342.1 118467559 4535513 4128118..4128876 1 NC_008596.1 hypothetical protein 4128876 4535513 MSMEG_4056 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888342.1 4128118 D 246196 CDS YP_888343.1 118469984 4533107 4129302..4129928 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 4129928 4533107 MSMEG_4057 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_888343.1 4129302 D 246196 CDS YP_888344.1 118469101 4535293 4129996..4131315 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily protein 4131315 4535293 MSMEG_4058 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_888344.1 4129996 D 246196 CDS YP_888345.1 118472319 4532907 4131375..4132064 1 NC_008596.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01493; haloacid dehalogenase 4132064 4532907 MSMEG_4059 Mycobacterium smegmatis str. MC2 155 haloacid dehalogenase YP_888345.1 4131375 D 246196 CDS YP_888346.1 118469212 4533266 4133329..4133757 1 NC_008596.1 identified by match to protein family HMM PF01042; translation initiation inhibitor 4133757 4533266 MSMEG_4061 Mycobacterium smegmatis str. MC2 155 translation initiation inhibitor YP_888346.1 4133329 D 246196 CDS YP_888347.1 118469939 4535850 4133790..4135040 1 NC_008596.1 identified by match to protein family HMM PF01425; glutamyl-tRNA(Gln) amidotransferase subunit A 4135040 4535850 MSMEG_4062 Mycobacterium smegmatis str. MC2 155 glutamyl-tRNA(Gln) amidotransferase subunit A YP_888347.1 4133790 D 246196 CDS YP_888348.1 118472388 4531798 complement(4135328..4136236) 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 4136236 4531798 MSMEG_4063 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_888348.1 4135328 R 246196 CDS YP_888349.1 118469067 4537253 complement(4136734..4137735) 1 NC_008596.1 identified by match to protein family HMM PF00107; zinc-binding alcohol dehydrogenase 4137735 4537253 MSMEG_4064 Mycobacterium smegmatis str. MC2 155 zinc-binding alcohol dehydrogenase YP_888349.1 4136734 R 246196 CDS YP_888350.1 118468421 4534564 complement(4138269..4139831) 1 NC_008596.1 identified by match to protein family HMM PF00501; feruloyl-CoA synthetase 4139831 4534564 MSMEG_4065 Mycobacterium smegmatis str. MC2 155 feruloyl-CoA synthetase YP_888350.1 4138269 R 246196 CDS YP_888351.1 118472152 4535678 complement(4139932..4141287) 1 NC_008596.1 hypothetical protein 4141287 4535678 MSMEG_4066 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888351.1 4139932 R 246196 CDS YP_888352.1 118468819 4534075 4141519..4141653 1 NC_008596.1 hypothetical protein 4141653 4534075 MSMEG_4068 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888352.1 4141519 D 246196 CDS YP_888353.1 118470170 4534348 complement(4141631..4142620) 1 NC_008596.1 identified by match to protein family HMM PF00107; zinc-containing alcohol dehydrogenase superfamily protein 4142620 4534348 MSMEG_4067 Mycobacterium smegmatis str. MC2 155 zinc-containing alcohol dehydrogenase superfamily protein YP_888353.1 4141631 R 246196 CDS YP_888354.1 118468261 4533994 complement(4142705..4142878) 1 NC_008596.1 hypothetical protein 4142878 4533994 MSMEG_4069 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888354.1 4142705 R 246196 CDS YP_888355.1 118469996 4533119 4142735..4143292 1 NC_008596.1 TetR family transcriptional regulator 4143292 4533119 MSMEG_4070 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_888355.1 4142735 D 246196 CDS YP_888356.1 118469621 4531593 4144114..4145160 1 NC_008596.1 identified by similarity to GB:CAD18826.1; ISMsm5, transposase 4145160 4531593 MSMEG_4072 Mycobacterium smegmatis str. MC2 155 ISMsm5, transposase YP_888356.1 4144114 D 246196 CDS YP_888357.1 118471213 4533815 4146668..4147465 1 NC_008596.1 identified by match to protein family HMM PF00106; peroxisomal trans-2-enoyl-CoA reductase 4147465 4533815 MSMEG_4074 Mycobacterium smegmatis str. MC2 155 peroxisomal trans-2-enoyl-CoA reductase YP_888357.1 4146668 D 246196 CDS YP_888358.1 118474020 4533433 4147462..4149525 1 NC_008596.1 identified by match to protein family HMM PF02629; CoA-binding protein 4149525 4533433 MSMEG_4075 Mycobacterium smegmatis str. MC2 155 CoA-binding protein YP_888358.1 4147462 D 246196 CDS YP_888359.1 118473149 4532590 4149545..4150744 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; butyryl-CoA dehydrogenase 4150744 4532590 MSMEG_4076 Mycobacterium smegmatis str. MC2 155 butyryl-CoA dehydrogenase YP_888359.1 4149545 D 246196 CDS YP_888360.1 118469267 4532237 4150741..4151499 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase 4151499 4532237 MSMEG_4077 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_888360.1 4150741 D 246196 CDS YP_888361.1 118468310 4533788 4151496..4152893 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; metabolite transporter YaaU 4152893 4533788 MSMEG_4078 Mycobacterium smegmatis str. MC2 155 metabolite transporter YaaU YP_888361.1 4151496 D 246196 CDS YP_888362.1 118470292 4533350 complement(4152916..4153683) 1 NC_008596.1 identified by match to protein family HMM PF00561; hydrolase 4153683 4533350 MSMEG_4079 Mycobacterium smegmatis str. MC2 155 hydrolase YP_888362.1 4152916 R 246196 CDS YP_888363.1 118470921 4533969 4155111..4156322 1 NC_008596.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; transposase IS116/IS110/IS902 4156322 4533969 MSMEG_4081 Mycobacterium smegmatis str. MC2 155 transposase IS116/IS110/IS902 YP_888363.1 4155111 D 246196 CDS YP_888364.1 118471436 4535111 complement(4157064..4158410) 1 NC_008596.1 monoxygenase 4158410 4535111 MSMEG_4082 Mycobacterium smegmatis str. MC2 155 monoxygenase YP_888364.1 4157064 R 246196 CDS YP_888365.1 118470310 4535188 complement(4158407..4159822) 1 NC_008596.1 monooxygenase 4159822 4535188 MSMEG_4083 Mycobacterium smegmatis str. MC2 155 monooxygenase YP_888365.1 4158407 R 246196 CDS YP_888366.1 118468832 4535409 complement(4159822..4160979) 1 NC_008596.1 identified by match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4160979 4535409 MSMEG_4084 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_888366.1 4159822 R 246196 CDS YP_888367.1 118467464 4536609 complement(4161044..4162327) 1 NC_008596.1 nitrilotriacetate monooxygenase component A 4162327 4536609 MSMEG_4085 Mycobacterium smegmatis str. MC2 155 nitrilotriacetate monooxygenase component A YP_888367.1 4161044 R 246196 CDS YP_888368.1 118473253 4537314 complement(4162324..4162905) 1 NC_008596.1 nitrilotriacetate monooxygenase component A 4162905 ssuD 4537314 ssuD Mycobacterium smegmatis str. MC2 155 nitrilotriacetate monooxygenase component A YP_888368.1 4162324 R 246196 CDS YP_888369.1 118471069 4537142 complement(4162983..4164401) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily protein 4164401 4537142 MSMEG_4087 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_888369.1 4162983 R 246196 CDS YP_888370.1 118470169 4534347 4164825..4165133 1 NC_008596.1 identified by match to protein family HMM PF01527; transposase 4165133 4534347 MSMEG_4088 Mycobacterium smegmatis str. MC2 155 transposase YP_888370.1 4164825 D 246196 CDS YP_888371.1 118467385 4533856 4165130..4165990 1 NC_008596.1 identified by match to protein family HMM PF00665; transposase subunit 4165990 4533856 MSMEG_4089 Mycobacterium smegmatis str. MC2 155 transposase subunit YP_888371.1 4165130 D 246196 CDS YP_888372.1 118468366 4532915 4166046..4166819 1 NC_008596.1 identified by match to protein family HMM PF01614; IclR family protein transcriptional regulator 4166819 4532915 MSMEG_4090 Mycobacterium smegmatis str. MC2 155 IclR family protein transcriptional regulator YP_888372.1 4166046 D 246196 CDS YP_888373.1 118471089 4537532 complement(4167383..4168717) 1 NC_008596.1 nitrilotriacetate monooxygenase component A 4168717 ssuD 4537532 ssuD Mycobacterium smegmatis str. MC2 155 nitrilotriacetate monooxygenase component A YP_888373.1 4167383 R 246196 CDS YP_888374.1 118471092 4535857 complement(4168736..4169806) 1 NC_008596.1 identified by match to protein family HMM PF00296; alkanal monooxygenase 4169806 4535857 MSMEG_4092 Mycobacterium smegmatis str. MC2 155 alkanal monooxygenase YP_888374.1 4168736 R 246196 CDS YP_888375.1 118471667 4536466 complement(4169808..4170839) 1 NC_008596.1 identified by match to protein family HMM PF00248; oxidoreductase, aldo/keto reductase 4170839 4536466 MSMEG_4093 Mycobacterium smegmatis str. MC2 155 oxidoreductase, aldo/keto reductase YP_888375.1 4169808 R 246196 CDS YP_888376.1 118472446 4533587 complement(4170932..4172143) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4172143 4533587 MSMEG_4094 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_888376.1 4170932 R 246196 CDS YP_888377.1 118473969 4533040 complement(4172140..4173057) 1 NC_008596.1 monooxygenase 4173057 4533040 MSMEG_4095 Mycobacterium smegmatis str. MC2 155 monooxygenase YP_888377.1 4172140 R 246196 CDS YP_888378.1 118469476 4534450 complement(4173054..4174289) 1 NC_008596.1 nitrilotriacetate monooxygenase component A 4174289 ssuD 4534450 ssuD Mycobacterium smegmatis str. MC2 155 nitrilotriacetate monooxygenase component A YP_888378.1 4173054 R 246196 CDS YP_888379.1 118472551 4532678 complement(4174286..4175515) 1 NC_008596.1 identified by match to protein family HMM PF08028; acyl-CoA dehydrogenase 4175515 4532678 MSMEG_4097 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_888379.1 4174286 R 246196 CDS YP_888380.1 118471826 4536319 complement(4175512..4177173) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 4177173 4536319 MSMEG_4098 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_888380.1 4175512 R 246196 CDS YP_888381.1 118470341 4534924 complement(4177170..4178078) 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 4178078 4534924 MSMEG_4099 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_888381.1 4177170 R 246196 CDS YP_888382.1 118470288 4537549 complement(4178075..4179127) 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 4179127 4537549 MSMEG_4100 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_888382.1 4178075 R 246196 CDS YP_888383.1 118470964 4534536 complement(4179138..4180772) 1 NC_008596.1 identified by match to protein family HMM PF00496; ABC transporter substrate-binding protein 4180772 4534536 MSMEG_4101 Mycobacterium smegmatis str. MC2 155 ABC transporter substrate-binding protein YP_888383.1 4179138 R 246196 CDS YP_888384.1 118469005 4536055 4181131..4182240 1 NC_008596.1 hypothetical protein 4182240 4536055 MSMEG_4102 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888384.1 4181131 D 246196 CDS YP_888385.1 118469561 4537507 4182282..4183370 1 NC_008596.1 identified by match to protein family HMM PF00296; alkanesulfonate monooxygenase 4183370 4537507 MSMEG_4103 Mycobacterium smegmatis str. MC2 155 alkanesulfonate monooxygenase YP_888385.1 4182282 D 246196 CDS YP_888386.1 118473384 4536629 4183367..4184623 1 NC_008596.1 identified by match to protein family HMM PF07690; transporter major facilitator family protein 4184623 4536629 MSMEG_4104 Mycobacterium smegmatis str. MC2 155 transporter major facilitator family protein YP_888386.1 4183367 D 246196 CDS YP_888387.1 118468980 4535090 complement(4184704..4185564) 1 NC_008596.1 identified by match to protein family HMM PF00665; transposase subunit 4185564 4535090 MSMEG_4105 Mycobacterium smegmatis str. MC2 155 transposase subunit YP_888387.1 4184704 R 246196 CDS YP_888388.1 118470911 4537585 complement(4185561..4185869) 1 NC_008596.1 identified by match to protein family HMM PF01527; transposase 4185869 4537585 MSMEG_4106 Mycobacterium smegmatis str. MC2 155 transposase YP_888388.1 4185561 R 246196 CDS YP_888389.1 118468102 4535600 complement(4185948..4186634) 1 NC_008596.1 phosphoglycerate mutase 4186634 4535600 MSMEG_4107 Mycobacterium smegmatis str. MC2 155 phosphoglycerate mutase YP_888389.1 4185948 R 246196 CDS YP_888390.1 118468684 4535907 complement(4186644..4188083) 1 NC_008596.1 identified by similarity to SP:P07002; match to protein family HMM PF02233; NAD(P) transhydrogenase subunit beta 4188083 pntB 4535907 pntB Mycobacterium smegmatis str. MC2 155 NAD(P) transhydrogenase subunit beta YP_888390.1 4186644 R 246196 CDS YP_888391.1 118468158 4535030 complement(4188102..4189649) 1 NC_008596.1 forms a tetramer composed of 2 subunit alphas and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha 4189649 pntA 4535030 pntA Mycobacterium smegmatis str. MC2 155 NAD(P) transhydrogenase subunit alpha YP_888391.1 4188102 R 246196 CDS YP_888392.1 118472976 4532256 complement(4189781..4190623) 1 NC_008596.1 identified by match to protein family HMM PF00725; match to protein family HMM PF02737; 3-hydroxyacyl-CoA dehydrogenase 4190623 4532256 MSMEG_4110 Mycobacterium smegmatis str. MC2 155 3-hydroxyacyl-CoA dehydrogenase YP_888392.1 4189781 R 246196 CDS YP_888393.1 118473171 4532573 complement(4190676..4191806) 1 NC_008596.1 identified by match to protein family HMM PF02515; alpha-methylacyl-CoA racemase 4191806 4532573 MSMEG_4111 Mycobacterium smegmatis str. MC2 155 alpha-methylacyl-CoA racemase YP_888393.1 4190676 R 246196 CDS YP_888394.1 118473863 4531111 complement(4191803..4193470) 1 NC_008596.1 identified by match to protein family HMM PF00501; cyclohexanecarboxylate-CoA ligase 4193470 4531111 MSMEG_4112 Mycobacterium smegmatis str. MC2 155 cyclohexanecarboxylate-CoA ligase YP_888394.1 4191803 R 246196 CDS YP_888395.1 118470388 4533449 complement(4193473..4194528) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4194528 4533449 MSMEG_4113 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_888395.1 4193473 R 246196 CDS YP_888396.1 118470306 4533364 complement(4194525..4195301) 1 NC_008596.1 identified by match to protein family HMM PF00378; naphthoate synthase 4195301 menB 4533364 menB Mycobacterium smegmatis str. MC2 155 naphthoate synthase YP_888396.1 4194525 R 246196 CDS YP_888397.1 118469654 4535064 complement(4195303..4196184) 1 NC_008596.1 identified by match to protein family HMM PF00725; match to protein family HMM PF02737; 3-hydroxybutyryl-CoA dehydrogenase 4196184 4535064 MSMEG_4115 Mycobacterium smegmatis str. MC2 155 3-hydroxybutyryl-CoA dehydrogenase YP_888397.1 4195303 R 246196 CDS YP_888398.1 118469372 4535886 complement(4196194..4197084) 1 NC_008596.1 identified by match to protein family HMM PF00725; match to protein family HMM PF02737; 3-hydroxybutyryl-CoA dehydrogenase 4197084 4535886 MSMEG_4116 Mycobacterium smegmatis str. MC2 155 3-hydroxybutyryl-CoA dehydrogenase YP_888398.1 4196194 R 246196 CDS YP_888399.1 118467657 4535005 complement(4197104..4197868) 1 NC_008596.1 identified by match to protein family HMM PF00106; 2-deoxy-D-gluconate 3-dehydrogenase 4197868 4535005 MSMEG_4117 Mycobacterium smegmatis str. MC2 155 2-deoxy-D-gluconate 3-dehydrogenase YP_888399.1 4197104 R 246196 CDS YP_888400.1 118469492 4534466 complement(4197865..4199088) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4199088 4534466 MSMEG_4118 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_888400.1 4197865 R 246196 CDS YP_888401.1 118468149 4532692 complement(4199085..4199873) 1 NC_008596.1 identified by match to protein family HMM PF00378; 3-hydroxybutyryl-CoA dehydratase 4199873 4532692 MSMEG_4119 Mycobacterium smegmatis str. MC2 155 3-hydroxybutyryl-CoA dehydratase YP_888401.1 4199085 R 246196 CDS YP_888402.1 118472528 4534727 complement(4199870..4201099) 1 NC_008596.1 identified by match to protein family HMM PF02515; CAIB/BAIF family protein 4201099 4534727 MSMEG_4120 Mycobacterium smegmatis str. MC2 155 CAIB/BAIF family protein YP_888402.1 4199870 R 246196 CDS YP_888403.1 118471759 4536368 complement(4201359..4202099) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 4202099 4536368 MSMEG_4121 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_888403.1 4201359 R 246196 CDS YP_888404.1 118469323 4533388 complement(4202248..4203609) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family protein transporter 4203609 4533388 MSMEG_4122 Mycobacterium smegmatis str. MC2 155 major facilitator family protein transporter YP_888404.1 4202248 R 246196 CDS YP_888405.1 118470139 4531698 4203971..4204870 1 NC_008596.1 identified by match to protein family HMM PF03446; 3-hydroxyisobutyrate dehydrogenase 4204870 4531698 MSMEG_4123 Mycobacterium smegmatis str. MC2 155 3-hydroxyisobutyrate dehydrogenase YP_888405.1 4203971 D 246196 CDS YP_888406.1 118469328 4535918 4204972..4206159 1 NC_008596.1 hypothetical protein 4206159 4535918 MSMEG_4124 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888406.1 4204972 D 246196 CDS YP_888407.1 118467829 4534580 complement(4206211..4206993) 1 NC_008596.1 identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 4206993 4534580 MSMEG_4125 Mycobacterium smegmatis str. MC2 155 oxidoreductase, short chain dehydrogenase/reductase YP_888407.1 4206211 R 246196 CDS YP_888408.1 118468865 4533750 4207206..4207916 1 NC_008596.1 identified by match to protein family HMM PF00857; hydrolase, isochorismatase 4207916 4533750 MSMEG_4126 Mycobacterium smegmatis str. MC2 155 hydrolase, isochorismatase YP_888408.1 4207206 D 246196 CDS YP_888409.1 118469758 4532822 complement(4208139..4209542) 1 NC_008596.1 identified by match to protein family HMM PF01609; TnpC protein 4209542 4532822 MSMEG_4127 Mycobacterium smegmatis str. MC2 155 TnpC protein YP_888409.1 4208139 R 246196 CDS YP_888410.1 118469069 4537255 complement(4209578..4210414) 1 NC_008596.1 hypothetical protein 4210414 4537255 MSMEG_4128 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888410.1 4209578 R 246196 CDS YP_888411.1 118471925 4536187 4210513..4211103 1 NC_008596.1 hypothetical protein 4211103 4536187 MSMEG_4129 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888411.1 4210513 D 246196 CDS YP_888412.1 118468758 4534247 4211146..4211262 1 NC_008596.1 hypothetical protein 4211262 4534247 MSMEG_4131 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888412.1 4211146 D 246196 CDS YP_888413.1 118473689 4531086 complement(4211259..4212110) 1 NC_008596.1 identified by match to protein family HMM PF01522; polysaccharide deacetylase 4212110 4531086 MSMEG_4130 Mycobacterium smegmatis str. MC2 155 polysaccharide deacetylase YP_888413.1 4211259 R 246196 CDS YP_888414.1 118471297 4532191 4212404..4212793 1 NC_008596.1 transposase 4212793 4532191 MSMEG_4132 Mycobacterium smegmatis str. MC2 155 transposase YP_888414.1 4212404 D 246196 CDS YP_888415.1 118472239 4532460 4212793..4213806 1 NC_008596.1 identified by match to protein family HMM PF00665; transposase 4213806 4532460 MSMEG_4133 Mycobacterium smegmatis str. MC2 155 transposase YP_888415.1 4212793 D 246196 CDS YP_888416.1 118473420 4537407 complement(4215569..4216120) 1 NC_008596.1 identified by match to protein family HMM PF03641; lysine decarboxylase superfamily protein 4216120 4537407 MSMEG_4135 Mycobacterium smegmatis str. MC2 155 lysine decarboxylase superfamily protein YP_888416.1 4215569 R 246196 CDS YP_888417.1 118472150 4532487 complement(4216158..4216742) 1 NC_008596.1 dTDP-glucose 4,6-dehydratase 4216742 4532487 MSMEG_4136 Mycobacterium smegmatis str. MC2 155 dTDP-glucose 4,6-dehydratase YP_888417.1 4216158 R 246196 CDS YP_888418.1 118467598 4531414 complement(4216742..4216960) 1 NC_008596.1 hypothetical protein 4216960 4531414 MSMEG_4137 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888418.1 4216742 R 246196 CDS YP_888419.1 118468810 4534066 4217351..4218319 1 NC_008596.1 identified by match to protein family HMM PF00795; aliphatic nitrilase 4218319 4534066 MSMEG_4138 Mycobacterium smegmatis str. MC2 155 aliphatic nitrilase YP_888419.1 4217351 D 246196 CDS YP_888420.1 118474003 4530963 4219709..4221142 1 NC_008596.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator 4221142 4530963 MSMEG_4140 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_888420.1 4219709 D 246196 CDS YP_888421.1 118471938 4536200 4221338..4222225 1 NC_008596.1 hypothetical protein 4222225 4536200 MSMEG_4141 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888421.1 4221338 D 246196 CDS YP_888422.1 118471189 4531483 complement(4222396..4223022) 1 NC_008596.1 TetR family transcriptional regulator 4223022 4531483 MSMEG_4142 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_888422.1 4222396 R 246196 CDS YP_888423.1 118472126 4532168 4223158..4223451 1 NC_008596.1 identified by match to protein family HMM PF07045; hypothetical protein 4223451 4532168 MSMEG_4143 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888423.1 4223158 D 246196 CDS YP_888424.1 118470275 4537536 4223495..4224433 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 4224433 4537536 MSMEG_4144 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_888424.1 4223495 D 246196 CDS YP_888425.1 118474055 4531775 complement(4224738..4225301) 1 NC_008596.1 identified by match to protein family HMM PF07883; cupin 4225301 4531775 MSMEG_4145 Mycobacterium smegmatis str. MC2 155 cupin YP_888425.1 4224738 R 246196 CDS YP_888426.1 118467404 4535826 4225664..4226641 1 NC_008596.1 identified by match to protein family HMM PF00107; quinone oxidoreductase 4226641 4535826 MSMEG_4146 Mycobacterium smegmatis str. MC2 155 quinone oxidoreductase YP_888426.1 4225664 D 246196 CDS YP_888427.1 118474049 4531730 4226696..4227970 1 NC_008596.1 identified by match to protein family HMM PF07690; major facilitator superfamily protein 4227970 4531730 MSMEG_4147 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_888427.1 4226696 D 246196 CDS YP_888428.1 118468453 4536901 complement(4228090..4229016) 1 NC_008596.1 identified by match to protein family HMM PF07859; lipase 4229016 4536901 MSMEG_4148 Mycobacterium smegmatis str. MC2 155 lipase YP_888428.1 4228090 R 246196 CDS YP_888429.1 118473199 4533316 4229192..4230127 1 NC_008596.1 catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase 4230127 4533316 MSMEG_4149 Mycobacterium smegmatis str. MC2 155 acetaldehyde dehydrogenase YP_888429.1 4229192 D 246196 CDS YP_888430.1 118469344 4533167 4230124..4231164 1 NC_008596.1 catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase 4231164 4533167 MSMEG_4150 Mycobacterium smegmatis str. MC2 155 4-hydroxy-2-ketovalerate aldolase YP_888430.1 4230124 D 246196 CDS YP_888431.1 118471924 4536225 complement(4231173..4231424) 1 NC_008596.1 hypothetical protein 4231424 4536225 MSMEG_4151 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888431.1 4231173 R 246196 CDS YP_888432.1 118467783 4535704 complement(4231421..4232374) 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; phenoxybenzoate dioxygenase subunit beta 4232374 4535704 MSMEG_4152 Mycobacterium smegmatis str. MC2 155 phenoxybenzoate dioxygenase subunit beta YP_888432.1 4231421 R 246196 CDS YP_888433.1 118470555 4533009 complement(4232377..4232835) 1 NC_008596.1 cytochrome P450 4232835 4533009 MSMEG_4153 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_888433.1 4232377 R 246196 CDS YP_888434.1 118468209 4536651 4232893..4234068 1 NC_008596.1 identified by match to protein family HMM PF00872; transposase, Mutator family protein 4234068 4536651 MSMEG_4154 Mycobacterium smegmatis str. MC2 155 transposase, Mutator family protein YP_888434.1 4232893 D 246196 CDS YP_888435.1 118470883 4537188 4234097..4235137 1 NC_008596.1 identified by match to protein family HMM PF00589; match to protein family HMM PF02899; transposase A 4235137 4537188 MSMEG_4155 Mycobacterium smegmatis str. MC2 155 transposase A YP_888435.1 4234097 D 246196 CDS YP_888436.1 118473464 4534908 4235134..4237359 1 NC_008596.1 identified by match to protein family HMM PF00589; transposase 4237359 4534908 MSMEG_4156 Mycobacterium smegmatis str. MC2 155 transposase YP_888436.1 4235134 D 246196 CDS YP_888437.1 118467717 4537725 4237349..4237777 1 NC_008596.1 transposase 4237777 4537725 MSMEG_4157 Mycobacterium smegmatis str. MC2 155 transposase YP_888437.1 4237349 D 246196 CDS YP_888438.1 118469205 4535794 4237954..4238103 1 NC_008596.1 transposase 4238103 4535794 MSMEG_4158 Mycobacterium smegmatis str. MC2 155 transposase YP_888438.1 4237954 D 246196 CDS YP_888439.1 118470391 4533452 complement(4238141..4239460) 1 NC_008596.1 identified by similarity to SP:P35883; match to protein family HMM PF00872; IS6120, transposase 4239460 4533452 MSMEG_4159 Mycobacterium smegmatis str. MC2 155 IS6120, transposase YP_888439.1 4238141 R 246196 CDS YP_888440.1 118473580 4534853 complement(4239604..4239756) 1 NC_008596.1 hypothetical protein 4239756 4534853 MSMEG_4160 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888440.1 4239604 R 246196 CDS YP_888441.1 118471542 4537623 4239712..4240125 1 NC_008596.1 hypothetical protein 4240125 4537623 MSMEG_4161 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888441.1 4239712 D 246196 CDS YP_888442.1 118471783 4536354 complement(4240426..4241589) 1 NC_008596.1 identified by match to protein family HMM PF06187; hypothetical protein 4241589 4536354 MSMEG_4162 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888442.1 4240426 R 246196 CDS YP_888443.1 118472945 4531761 complement(4241589..4242311) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; 3-oxoacyl-ACP reductase 4242311 4531761 MSMEG_4163 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_888443.1 4241589 R 246196 CDS YP_888444.1 118472310 4532898 complement(4242311..4243027) 1 NC_008596.1 identified by match to protein family HMM PF00378; 3-hydroxybutyryl-CoA dehydratase 4243027 4532898 MSMEG_4164 Mycobacterium smegmatis str. MC2 155 3-hydroxybutyryl-CoA dehydratase YP_888444.1 4242311 R 246196 CDS YP_888445.1 118468011 4533092 complement(4243036..4244478) 1 NC_008596.1 identified by match to protein family HMM PF00171; [NAD+] benzaldehyde dehydrogenase 4244478 4533092 MSMEG_4165 Mycobacterium smegmatis str. MC2 155 [NAD+] benzaldehyde dehydrogenase YP_888445.1 4243036 R 246196 CDS YP_888446.1 118468197 4536636 complement(4244495..4245649) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4245649 4536636 MSMEG_4166 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_888446.1 4244495 R 246196 CDS YP_888447.1 118469387 4532281 complement(4245646..4246779) 1 NC_008596.1 identified by match to protein family HMM PF00107; alcohol dehydrogenase 4246779 4532281 MSMEG_4167 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_888447.1 4245646 R 246196 CDS YP_888448.1 118470125 4534496 complement(4246781..4248370) 1 NC_008596.1 identified by match to protein family HMM PF01144; propionate CoA-transferase 4248370 4534496 MSMEG_4168 Mycobacterium smegmatis str. MC2 155 propionate CoA-transferase YP_888448.1 4246781 R 246196 CDS YP_888449.1 118471318 4534658 complement(4248367..4249077) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; 3-oxoacyl-ACP reductase 4249077 4534658 MSMEG_4169 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_888449.1 4248367 R 246196 CDS YP_888450.1 118472080 4537089 complement(4249070..4250605) 1 NC_008596.1 identified by match to protein family HMM PF00005; ribose transport ATP-binding protein RbsA 4250605 4537089 MSMEG_4170 Mycobacterium smegmatis str. MC2 155 ribose transport ATP-binding protein RbsA YP_888450.1 4249070 R 246196 CDS YP_888451.1 118473040 4533193 complement(4250602..4251639) 1 NC_008596.1 identified by match to protein family HMM PF02653; ribose transporter permease RbsC 4251639 4533193 MSMEG_4171 Mycobacterium smegmatis str. MC2 155 ribose transporter permease RbsC YP_888451.1 4250602 R 246196 CDS YP_888452.1 118467463 4536608 complement(4251653..4252771) 1 NC_008596.1 identified by match to protein family HMM PF00532; D-ribose-binding periplasmic protein RbsB 4252771 4536608 MSMEG_4172 Mycobacterium smegmatis str. MC2 155 D-ribose-binding periplasmic protein RbsB YP_888452.1 4251653 R 246196 CDS YP_888453.1 118471187 4531481 complement(4252768..4253202) 1 NC_008596.1 identified by match to protein family HMM PF01575; MaoC family protein 4253202 4531481 MSMEG_4173 Mycobacterium smegmatis str. MC2 155 MaoC family protein YP_888453.1 4252768 R 246196 CDS YP_888454.1 118470527 4536119 complement(4253199..4253996) 1 NC_008596.1 identified by match to protein family HMM PF01614; IclR family transcriptional regulator 4253996 4536119 MSMEG_4174 Mycobacterium smegmatis str. MC2 155 IclR family transcriptional regulator YP_888454.1 4253199 R 246196 CDS YP_888455.1 118469164 4534750 4254189..4254506 1 NC_008596.1 identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 4254506 4534750 MSMEG_4175 Mycobacterium smegmatis str. MC2 155 ArsR family transcriptional regulator YP_888455.1 4254189 D 246196 CDS YP_888456.1 118468188 4534402 4254503..4255015 1 NC_008596.1 hypothetical protein 4255015 4534402 MSMEG_4176 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888456.1 4254503 D 246196 CDS YP_888457.1 118467674 4536940 4255057..4255647 1 NC_008596.1 flavodoxin/nitric oxide synthase 4255647 4536940 MSMEG_4178 Mycobacterium smegmatis str. MC2 155 flavodoxin/nitric oxide synthase YP_888457.1 4255057 D 246196 CDS YP_888458.1 118470293 4533351 complement(4256984..4257466) 1 NC_008596.1 integral membrane protein 4257466 4533351 MSMEG_4179 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_888458.1 4256984 R 246196 CDS YP_888459.1 118468663 4535239 complement(4257530..4258396) 1 NC_008596.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 4258396 hisG 4535239 hisG Mycobacterium smegmatis str. MC2 155 ATP phosphoribosyltransferase YP_888459.1 4257530 R 246196 CDS YP_888460.1 118473209 4531059 complement(4258399..4258680) 1 NC_008596.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 4258680 hisE 4531059 hisE Mycobacterium smegmatis str. MC2 155 phosphoribosyl-ATP pyrophosphatase YP_888460.1 4258399 R 246196 CDS YP_888461.1 118473448 4534892 complement(4258730..4260226) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; arabinose-proton symporter 4260226 4534892 MSMEG_4182 Mycobacterium smegmatis str. MC2 155 arabinose-proton symporter YP_888461.1 4258730 R 246196 CDS YP_888462.1 118472590 4534371 complement(4260273..4260950) 1 NC_008596.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; phosphoglycolate phosphatase 4260950 4534371 MSMEG_4183 Mycobacterium smegmatis str. MC2 155 phosphoglycolate phosphatase YP_888462.1 4260273 R 246196 CDS YP_888463.1 118472811 4536665 4261027..4261209 1 NC_008596.1 dTDP-glucose-46-dehydratase 4261209 4536665 MSMEG_4184 Mycobacterium smegmatis str. MC2 155 dTDP-glucose-46-dehydratase YP_888463.1 4261027 D 246196 CDS YP_888464.1 118471600 4536551 complement(4261269..4265009) 1 NC_008596.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 4265009 metH 4536551 metH Mycobacterium smegmatis str. MC2 155 B12-dependent methionine synthase YP_888464.1 4261269 R 246196 CDS YP_888465.1 118468179 4534393 4265484..4266362 1 NC_008596.1 identified by match to protein family HMM PF01908; hypothetical protein 4266362 4534393 MSMEG_4186 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888465.1 4265484 D 246196 CDS YP_888466.1 118471200 4531494 complement(4266384..4267841) 1 NC_008596.1 identified by match to protein family HMM PF06742; match to protein family HMM PF06863; hypothetical protein 4267841 4531494 MSMEG_4187 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888466.1 4266384 R 246196 CDS YP_888467.1 118472164 4535690 complement(4267841..4268728) 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 4268728 4535690 MSMEG_4188 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_888467.1 4267841 R 246196 CDS YP_888468.1 118472573 4534157 complement(4268754..4269992) 1 NC_008596.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 4269992 cysS 4534157 cysS Mycobacterium smegmatis str. MC2 155 cysteinyl-tRNA synthetase YP_888468.1 4268754 R 246196 CDS YP_888469.1 118473662 4531233 complement(4270116..4270877) 1 NC_008596.1 identified by match to protein family HMM PF00459; inositol monophosphatase 4270877 4531233 MSMEG_4190 Mycobacterium smegmatis str. MC2 155 inositol monophosphatase YP_888469.1 4270116 R 246196 CDS YP_888470.1 118470002 4533125 complement(4271019..4271867) 1 NC_008596.1 hypothetical protein 4271867 4533125 MSMEG_4191 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888470.1 4271019 R 246196 CDS YP_888471.1 118472105 4537486 complement(4271851..4272438) 1 NC_008596.1 hypothetical protein 4272438 4537486 MSMEG_4192 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888471.1 4271851 R 246196 CDS YP_888472.1 118473456 4534900 complement(4272474..4273145) 1 NC_008596.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase 4273145 4534900 MSMEG_4193 Mycobacterium smegmatis str. MC2 155 phosphoglycerate mutase YP_888472.1 4272474 R 246196 CDS YP_888473.1 118471138 4531825 complement(4273156..4273986) 1 NC_008596.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase 4273986 4531825 MSMEG_4194 Mycobacterium smegmatis str. MC2 155 UDP pyrophosphate phosphatase YP_888473.1 4273156 R 246196 CDS YP_888474.1 118470046 4534590 complement(4274087..4274392) 1 NC_008596.1 hypothetical protein 4274392 4534590 MSMEG_4195 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888474.1 4274087 R 246196 CDS YP_888475.1 118467343 4534702 4274534..4275574 1 NC_008596.1 LppL protein 4275574 4534702 MSMEG_4196 Mycobacterium smegmatis str. MC2 155 LppL protein YP_888475.1 4274534 D 246196 CDS YP_888476.1 118473600 4531035 4275571..4275840 1 NC_008596.1 hypothetical protein 4275840 4531035 MSMEG_4197 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888476.1 4275571 D 246196 CDS YP_888477.1 118467802 4535978 4275837..4276901 1 NC_008596.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 4276901 pyrD 4535978 pyrD Mycobacterium smegmatis str. MC2 155 dihydroorotate dehydrogenase 2 YP_888477.1 4275837 D 246196 CDS YP_888478.1 118469826 4532852 complement(4276933..4277454) 1 NC_008596.1 identified by match to protein family HMM PF01161; match to protein family HMM TIGR00481; hypothetical protein 4277454 4532852 MSMEG_4199 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888478.1 4276933 R 246196 CDS YP_888479.1 118471602 4536553 complement(4277491..4278825) 1 NC_008596.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; hypothetical protein 4278825 4536553 MSMEG_4200 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888479.1 4277491 R 246196 CDS YP_888480.1 118472767 4531858 complement(4279122..4280453) 1 NC_008596.1 hypothetical protein 4280453 4531858 MSMEG_4202 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888480.1 4279122 R 246196 CDS YP_888481.1 118473622 4531018 complement(4280469..4282310) 1 NC_008596.1 identified by match to protein family HMM PF00082; peptidase S8/S53 subtilisin kexin sedolisin 4282310 4531018 MSMEG_4203 Mycobacterium smegmatis str. MC2 155 peptidase S8/S53 subtilisin kexin sedolisin YP_888481.1 4280469 R 246196 CDS YP_888482.1 118470785 4531149 4282640..4283755 1 NC_008596.1 catalase 4283755 4531149 MSMEG_4204 Mycobacterium smegmatis str. MC2 155 catalase YP_888482.1 4282640 D 246196 CDS YP_888483.1 118471754 4536401 4283833..4286454 1 NC_008596.1 identified by match to protein family HMM PF00196; match to protein family HMM PF07721; transcriptional regulator 4286454 4536401 MSMEG_4205 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_888483.1 4283833 D 246196 CDS YP_888484.1 118469989 4533112 complement(4290634..4291026) 1 NC_008596.1 identified by match to protein family HMM PF00582; universal stress protein family protein 4291026 4533112 MSMEG_4207 Mycobacterium smegmatis str. MC2 155 universal stress protein family protein YP_888484.1 4290634 R 246196 CDS YP_888485.1 118473839 4531993 complement(4291023..4292567) 1 NC_008596.1 identified by match to protein family HMM PF01970; integral membrane protein 4292567 4531993 MSMEG_4208 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_888485.1 4291023 R 246196 CDS YP_888486.1 118468445 4536893 complement(4292564..4293100) 1 NC_008596.1 integral membrane protein 4293100 4536893 MSMEG_4209 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_888486.1 4292564 R 246196 CDS YP_888487.1 118469888 4533207 complement(4293097..4294080) 1 NC_008596.1 identified by match to protein family HMM PF03401; hypothetical protein 4294080 4533207 MSMEG_4210 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888487.1 4293097 R 246196 CDS YP_888488.1 118468132 4535220 4294185..4295864 1 NC_008596.1 identified by match to protein family HMM PF02518; two component system histidine kinase 4295864 4535220 MSMEG_4211 Mycobacterium smegmatis str. MC2 155 two component system histidine kinase YP_888488.1 4294185 D 246196 CDS YP_888489.1 118469611 4531583 4295857..4296519 1 NC_008596.1 identified by match to protein family HMM PF00072; transcriptional regulatory protein CitT 4296519 4531583 MSMEG_4212 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein CitT YP_888489.1 4295857 D 246196 CDS YP_888490.1 118470384 4532331 4296613..4297770 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 hydroxylase 4297770 4532331 MSMEG_4213 Mycobacterium smegmatis str. MC2 155 cytochrome P450 hydroxylase YP_888490.1 4296613 D 246196 CDS YP_888491.1 118468747 4534275 4297888..4298610 1 NC_008596.1 glutamine amidotransferase 4298610 4534275 MSMEG_4214 Mycobacterium smegmatis str. MC2 155 glutamine amidotransferase YP_888491.1 4297888 D 246196 CDS YP_888492.1 118472762 4531951 4298656..4299333 1 NC_008596.1 identified by match to protein family HMM PF00156; phosphoribosyltransferase 4299333 4531951 MSMEG_4215 Mycobacterium smegmatis str. MC2 155 phosphoribosyltransferase YP_888492.1 4298656 D 246196 CDS YP_888493.1 118470892 4537197 complement(4299335..4299844) 1 NC_008596.1 hypothetical protein 4299844 4537197 MSMEG_4216 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888493.1 4299335 R 246196 CDS YP_888494.1 118470637 4532396 complement(4299939..4300757) 1 NC_008596.1 identified by match to protein family HMM PF05103; DivIVA protein 4300757 4532396 MSMEG_4217 Mycobacterium smegmatis str. MC2 155 DivIVA protein YP_888494.1 4299939 R 246196 CDS YP_888495.1 118473959 4533030 complement(4300998..4301288) 1 NC_008596.1 transmembrane protein 4301288 4533030 MSMEG_4218 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_888495.1 4300998 R 246196 CDS YP_888496.1 118469126 4535339 complement(4301451..4302095) 1 NC_008596.1 identified by match to protein family HMM PF04472; hypothetical protein 4302095 4535339 MSMEG_4219 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888496.1 4301451 R 246196 CDS YP_888497.1 118470091 4532966 complement(4302079..4302954) 1 NC_008596.1 identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044; hypothetical protein 4302954 4532966 MSMEG_4220 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888497.1 4302079 R 246196 CDS YP_888498.1 118467628 4534202 complement(4302930..4303643) 1 NC_008596.1 identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; hypothetical protein 4303643 4534202 MSMEG_4221 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888498.1 4302930 R 246196 CDS YP_888499.1 118472078 4537087 4303589..4303702 1 NC_008596.1 hypothetical protein 4303702 4537087 MSMEG_4223 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888499.1 4303589 D 246196 CDS YP_888500.1 118467631 4534205 complement(4303689..4304846) 1 NC_008596.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 4304846 ftsZ 4534205 ftsZ Mycobacterium smegmatis str. MC2 155 cell division protein FtsZ YP_888500.1 4303689 R 246196 CDS YP_888501.1 118471363 4535270 4304832..4304960 1 NC_008596.1 hypothetical protein 4304960 4535270 MSMEG_4224 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888501.1 4304832 D 246196 CDS YP_888502.1 118471370 4535277 complement(4305093..4306094) 1 NC_008596.1 identified by match to protein family HMM PF03799; cell division protein FtsQ 4306094 4535277 MSMEG_4225 Mycobacterium smegmatis str. MC2 155 cell division protein FtsQ YP_888502.1 4305093 R 246196 CDS YP_888503.1 118469061 4537247 complement(4306091..4307539) 1 NC_008596.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 4307539 murC 4537247 murC Mycobacterium smegmatis str. MC2 155 UDP-N-acetylmuramate--L-alanine ligase YP_888503.1 4306091 R 246196 CDS YP_888504.1 118468082 4536010 complement(4307536..4308693) 1 NC_008596.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 4308693 murG 4536010 murG Mycobacterium smegmatis str. MC2 155 UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_888504.1 4307536 R 246196 CDS YP_888505.1 118467519 4535530 complement(4308690..4310396) 1 NC_008596.1 identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; cell division protein FtsW 4310396 ftsW 4535530 ftsW Mycobacterium smegmatis str. MC2 155 cell division protein FtsW YP_888505.1 4308690 R 246196 CDS YP_888506.1 118470144 4531703 complement(4310401..4311882) 1 NC_008596.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 4311882 murD 4531703 murD Mycobacterium smegmatis str. MC2 155 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_888506.1 4310401 R 246196 CDS YP_888507.1 118471002 4533495 complement(4311875..4312954) 1 NC_008596.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 4312954 mraY 4533495 mraY Mycobacterium smegmatis str. MC2 155 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_888507.1 4311875 R 246196 CDS YP_888508.1 118473094 4531155 complement(4312951..4314480) 1 NC_008596.1 identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 4314480 4531155 MSMEG_4231 Mycobacterium smegmatis str. MC2 155 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_888508.1 4312951 R 246196 CDS YP_888509.1 118472293 4532765 complement(4314477..4316039) 1 NC_008596.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 4316039 murE 4532765 murE Mycobacterium smegmatis str. MC2 155 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_888509.1 4314477 R 246196 CDS YP_888510.1 118469257 4531550 complement(4316086..4318032) 1 NC_008596.1 identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin binding protein transpeptidase domain-containing protein 4318032 4531550 MSMEG_4233 Mycobacterium smegmatis str. MC2 155 penicillin binding protein transpeptidase domain-containing protein YP_888510.1 4316086 R 246196 CDS YP_888511.1 118469935 4535846 complement(4318029..4319171) 1 NC_008596.1 hypothetical protein 4319171 4535846 MSMEG_4234 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888511.1 4318029 R 246196 CDS YP_888512.1 118468497 4537686 complement(4319171..4320151) 1 NC_008596.1 identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 4320151 mraW 4537686 mraW Mycobacterium smegmatis str. MC2 155 S-adenosyl-methyltransferase MraW YP_888512.1 4319171 R 246196 CDS YP_888513.1 118469214 4533268 complement(4320309..4320740) 1 NC_008596.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 4320740 mraZ 4533268 mraZ Mycobacterium smegmatis str. MC2 155 cell division protein MraZ YP_888513.1 4320309 R 246196 CDS YP_888514.1 118472897 4534040 complement(4321263..4321664) 1 NC_008596.1 transmembrane protein 4321664 4534040 MSMEG_4237 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_888514.1 4321263 R 246196 CDS YP_888515.1 118473822 4531632 4321921..4322538 1 NC_008596.1 hypothetical protein 4322538 4531632 MSMEG_4238 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888515.1 4321921 D 246196 CDS YP_888516.1 118471170 4534956 4322593..4323288 1 NC_008596.1 LppM protein 4323288 4534956 MSMEG_4239 Mycobacterium smegmatis str. MC2 155 LppM protein YP_888516.1 4322593 D 246196 CDS YP_888517.1 118468511 4535492 4323431..4324519 1 NC_008596.1 identified by match to protein family HMM PF00348; polyprenyl synthetase 4324519 4535492 MSMEG_4240 Mycobacterium smegmatis str. MC2 155 polyprenyl synthetase YP_888517.1 4323431 D 246196 CDS YP_888518.1 118473270 4537700 4324544..4326061 1 NC_008596.1 integral membrane protein 4326061 4537700 MSMEG_4241 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_888518.1 4324544 D 246196 CDS YP_888519.1 118473118 4531844 complement(4326128..4326532) 1 NC_008596.1 transcriptional regulatory protein 4326532 4531844 MSMEG_4242 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_888519.1 4326128 R 246196 CDS YP_888520.1 118472179 4533717 4326578..4327846 1 NC_008596.1 identified by match to protein family HMM PF00069; match to protein family HMM PF01163; serine/threonine protein kinase 4327846 4533717 MSMEG_4243 Mycobacterium smegmatis str. MC2 155 serine/threonine protein kinase YP_888520.1 4326578 D 246196 CDS YP_888521.1 118468924 4537458 complement(4327868..4329262) 1 NC_008596.1 identified by match to protein family HMM PF01474; match to protein family HMM TIGR01358; 3-deoxy-7-phosphoheptulonate synthase 4329262 4537458 MSMEG_4244 Mycobacterium smegmatis str. MC2 155 3-deoxy-7-phosphoheptulonate synthase YP_888521.1 4327868 R 246196 CDS YP_888522.1 118472065 4536705 complement(4329267..4329776) 1 NC_008596.1 hypothetical protein 4329776 4536705 MSMEG_4245 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888522.1 4329267 R 246196 CDS YP_888523.1 118469533 4537107 complement(4329722..4330684) 1 NC_008596.1 integral membrane protein 4330684 4537107 MSMEG_4246 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_888523.1 4329722 R 246196 CDS YP_888524.1 118468966 4533530 4330759..4332081 1 NC_008596.1 integral membrane protein 4332081 4533530 MSMEG_4247 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_888524.1 4330759 D 246196 CDS YP_888525.1 118468181 4534395 complement(4332098..4332823) 1 NC_008596.1 identified by match to protein family HMM PF01553; 1-acylglycerol-3-phosphate O-acyltransferase 4332823 4534395 MSMEG_4248 Mycobacterium smegmatis str. MC2 155 1-acylglycerol-3-phosphate O-acyltransferase YP_888525.1 4332098 R 246196 CDS YP_888526.1 118470291 4533349 complement(4332930..4333337) 1 NC_008596.1 hypothetical protein 4333337 4533349 MSMEG_4249 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888526.1 4332930 R 246196 CDS YP_888527.1 118471162 4530952 complement(4333334..4334611) 1 NC_008596.1 identified by match to protein family HMM PF02374; membrane transport ATPase 4334611 4530952 MSMEG_4250 Mycobacterium smegmatis str. MC2 155 membrane transport ATPase YP_888527.1 4333334 R 246196 CDS YP_888528.1 118473900 4536595 complement(4334612..4335049) 1 NC_008596.1 identified by match to protein family HMM PF03364; cyclase/dehydrase 4335049 4536595 MSMEG_4251 Mycobacterium smegmatis str. MC2 155 cyclase/dehydrase YP_888528.1 4334612 R 246196 CDS YP_888529.1 118468180 4534394 complement(4335143..4335532) 1 NC_008596.1 hypothetical protein 4335532 4534394 MSMEG_4252 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888529.1 4335143 R 246196 CDS YP_888530.1 118470901 4537575 4335624..4337423 1 NC_008596.1 identified by match to protein family HMM PF00501; AMP-binding protein 4337423 4537575 MSMEG_4254 Mycobacterium smegmatis str. MC2 155 AMP-binding protein YP_888530.1 4335624 D 246196 CDS YP_888531.1 118471987 4536134 complement(4337414..4338562) 1 NC_008596.1 identified by match to protein family HMM PF00534; glycoside hydrolase family protein 4338562 4536134 MSMEG_4253 Mycobacterium smegmatis str. MC2 155 glycoside hydrolase family protein YP_888531.1 4337414 R 246196 CDS YP_888532.1 118473864 4531112 complement(4338603..4339400) 1 NC_008596.1 hypothetical protein 4339400 4531112 MSMEG_4255 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888532.1 4338603 R 246196 CDS YP_888533.1 118469018 4530869 complement(4339480..4340625) 1 NC_008596.1 identified by match to protein family HMM PF00877; NLP/P60 family protein 4340625 4530869 MSMEG_4256 Mycobacterium smegmatis str. MC2 155 NLP/P60 family protein YP_888533.1 4339480 R 246196 CDS YP_888534.1 118474007 4530967 complement(4340779..4341150) 1 NC_008596.1 hypothetical protein 4341150 4530967 MSMEG_4257 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888534.1 4340779 R 246196 CDS YP_888535.1 118471901 4536238 4341162..4343180 1 NC_008596.1 contains 3'-5'exonuclease domain; hypothetical protein 4343180 4536238 MSMEG_4259 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888535.1 4341162 D 246196 CDS YP_888536.1 118469185 4534292 complement(4343055..4344149) 1 NC_008596.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 4344149 trpD 4534292 trpD Mycobacterium smegmatis str. MC2 155 anthranilate phosphoribosyltransferase YP_888536.1 4343055 R 246196 CDS YP_888537.1 118467557 4535511 4344261..4344872 1 NC_008596.1 identified by match to protein family HMM PF00510; cytochrome C oxidase subunit 3 4344872 4535511 MSMEG_4260 Mycobacterium smegmatis str. MC2 155 cytochrome C oxidase subunit 3 YP_888537.1 4344261 D 246196 CDS YP_888538.1 118472891 4534034 4344911..4345717 1 NC_008596.1 identified by match to protein family HMM PF00034; ubiquinol-cytochrome C reductase cytochrome C subunit 4345717 4534034 MSMEG_4261 Mycobacterium smegmatis str. MC2 155 ubiquinol-cytochrome C reductase cytochrome C subunit YP_888538.1 4344911 D 246196 CDS YP_888539.1 118473759 4537735 4345696..4346922 1 NC_008596.1 identified by match to protein family HMM PF00355; ubiquinol-cytochrome C reductase iron-sulfur subunit 4346922 4537735 MSMEG_4262 Mycobacterium smegmatis str. MC2 155 ubiquinol-cytochrome C reductase iron-sulfur subunit YP_888539.1 4345696 D 246196 CDS YP_888540.1 118471438 4535113 4346919..4348559 1 NC_008596.1 identified by match to protein family HMM PF00033; ubiquinol-cytochrome C reductase cytochrome b subunit 4348559 4535113 MSMEG_4263 Mycobacterium smegmatis str. MC2 155 ubiquinol-cytochrome C reductase cytochrome b subunit YP_888540.1 4346919 D 246196 CDS YP_888541.1 118472757 4531946 complement(4349138..4349701) 1 NC_008596.1 hypothetical protein 4349701 4531946 MSMEG_4264 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888541.1 4349138 R 246196 CDS YP_888542.1 118472224 4531475 complement(4349701..4350594) 1 NC_008596.1 MmpS3 protein 4350594 4531475 MSMEG_4265 Mycobacterium smegmatis str. MC2 155 MmpS3 protein YP_888542.1 4349701 R 246196 CDS YP_888543.1 118470095 4532970 4350575..4350724 1 NC_008596.1 hypothetical protein 4350724 4532970 MSMEG_4266 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888543.1 4350575 D 246196 CDS YP_888544.1 118467496 4537383 complement(4350770..4351189) 1 NC_008596.1 cytochrome C oxidase polypeptide 4 4351189 4537383 MSMEG_4267 Mycobacterium smegmatis str. MC2 155 cytochrome C oxidase polypeptide 4 YP_888544.1 4350770 R 246196 CDS YP_888545.1 118472731 4532360 complement(4351209..4352234) 1 NC_008596.1 identified by match to protein family HMM PF00116; cytochrome C oxidase subunit 2 4352234 4532360 MSMEG_4268 Mycobacterium smegmatis str. MC2 155 cytochrome C oxidase subunit 2 YP_888545.1 4351209 R 246196 CDS YP_888546.1 118469075 4537630 4352394..4354370 1 NC_008596.1 identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536; asparagine synthase 4354370 asnB 4537630 asnB Mycobacterium smegmatis str. MC2 155 asparagine synthase YP_888546.1 4352394 D 246196 CDS YP_888547.1 118470653 4534661 complement(4354392..4355369) 1 NC_008596.1 identified by match to protein family HMM PF00294; adenosine kinase 4355369 4534661 MSMEG_4270 Mycobacterium smegmatis str. MC2 155 adenosine kinase YP_888547.1 4354392 R 246196 CDS YP_888548.1 118468790 4535308 4355564..4356217 1 NC_008596.1 hypothetical protein 4356217 4535308 MSMEG_4271 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888548.1 4355564 D 246196 CDS YP_888549.1 118467620 4533082 complement(4356255..4356611) 1 NC_008596.1 identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; HesB/YadR/YfhF family protein 4356611 4533082 MSMEG_4272 Mycobacterium smegmatis str. MC2 155 HesB/YadR/YfhF family protein YP_888549.1 4356255 R 246196 CDS YP_888550.1 118473726 4536960 4356838..4357524 1 NC_008596.1 integral membrane protein 4357524 4536960 MSMEG_4273 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_888550.1 4356838 D 246196 CDS YP_888551.1 118471500 4536839 4357558..4358091 1 NC_008596.1 identified by match to protein family HMM PF02283; cobinamide kinase / cobinamide phosphate guanyltransferase 4358091 cobU 4536839 cobU Mycobacterium smegmatis str. MC2 155 cobinamide kinase / cobinamide phosphate guanyltransferase YP_888551.1 4357558 D 246196 CDS YP_888552.1 118470107 4534942 4358088..4359143 1 NC_008596.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 4359143 cobT 4534942 cobT Mycobacterium smegmatis str. MC2 155 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_888552.1 4358088 D 246196 CDS YP_888553.1 118468361 4533960 4359163..4359888 1 NC_008596.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 4359888 cobS 4533960 cobS Mycobacterium smegmatis str. MC2 155 cobalamin synthase YP_888553.1 4359163 D 246196 CDS YP_888554.1 118472496 4532447 complement(4359885..4360991) 1 NC_008596.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 4360991 ilvE 4532447 ilvE Mycobacterium smegmatis str. MC2 155 branched-chain amino acid aminotransferase YP_888554.1 4359885 R 246196 CDS YP_888555.1 118473206 4531056 complement(4361041..4362138) 1 NC_008596.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 4362138 gcvT 4531056 gcvT Mycobacterium smegmatis str. MC2 155 glycine cleavage system aminomethyltransferase T YP_888555.1 4361041 R 246196 CDS YP_888556.1 118467968 4535150 4362195..4363286 1 NC_008596.1 identified by match to protein family HMM PF00211; adenylate and guanylate cyclase catalytic domain-containing protein 4363286 4535150 MSMEG_4279 Mycobacterium smegmatis str. MC2 155 adenylate and guanylate cyclase catalytic domain-containing protein YP_888556.1 4362195 D 246196 CDS YP_888557.1 118467381 4533852 4363291..4364850 1 NC_008596.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 4364850 4533852 MSMEG_4281 Mycobacterium smegmatis str. MC2 155 leucyl aminopeptidase YP_888557.1 4363291 D 246196 CDS YP_888558.1 118468842 4535419 complement(4364847..4366583) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF00561; short chain dehydrogenase 4366583 4535419 MSMEG_4280 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_888558.1 4364847 R 246196 CDS YP_888559.1 118473028 4532349 complement(4366658..4367005) 1 NC_008596.1 hypothetical protein 4367005 4532349 MSMEG_4282 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888559.1 4366658 R 246196 CDS YP_888560.1 118471055 4537128 4367210..4368967 1 NC_008596.1 identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; match to protein family HMM TIGR02927; dihydrolipoamide acetyltransferase 4368967 sucB 4537128 sucB Mycobacterium smegmatis str. MC2 155 dihydrolipoamide acetyltransferase YP_888560.1 4367210 D 246196 CDS YP_888561.1 118469178 4534285 4369020..4369928 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM TIGR01777; hypothetical protein 4369928 4534285 MSMEG_4284 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888561.1 4369020 D 246196 CDS YP_888562.1 118468123 4535210 4369946..4370632 1 NC_008596.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system protein H; lipoate-protein ligase B 4370632 lipB 4535210 lipB Mycobacterium smegmatis str. MC2 155 lipoate-protein ligase B YP_888562.1 4369946 D 246196 CDS YP_888563.1 118472901 4533770 4370637..4371581 1 NC_008596.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 4371581 lipA 4533770 lipA Mycobacterium smegmatis str. MC2 155 lipoyl synthase YP_888563.1 4370637 D 246196 CDS YP_888564.1 118470886 4537191 4371586..4372338 1 NC_008596.1 integral membrane protein 4372338 4537191 MSMEG_4287 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_888564.1 4371586 D 246196 CDS YP_888565.1 118469716 4537221 4372372..4374180 1 NC_008596.1 identified by match to protein family HMM PF01979; match to protein family HMM PF07969; amidohydrolase 4374180 4537221 MSMEG_4289 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_888565.1 4372372 D 246196 CDS YP_888566.1 118472470 4533836 complement(4374158..4374631) 1 NC_008596.1 identified by match to protein family HMM PF06271; integral membrane protein 4374631 4533836 MSMEG_4288 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_888566.1 4374158 R 246196 CDS YP_888567.1 118467956 4532067 4374853..4376289 1 NC_008596.1 identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase 4376289 glnA 4532067 glnA Mycobacterium smegmatis str. MC2 155 glutamine synthetase YP_888567.1 4374853 D 246196 CDS YP_888568.1 118472529 4534728 4376518..4376949 1 NC_008596.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 4376949 dtd 4534728 dtd Mycobacterium smegmatis str. MC2 155 D-tyrosyl-tRNA(Tyr) deacylase YP_888568.1 4376518 D 246196 CDS YP_888569.1 118468165 4535037 4376977..4377387 1 NC_008596.1 identified by match to protein family HMM PF07681; integral membrane protein 4377387 4535037 MSMEG_4292 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_888569.1 4376977 D 246196 CDS YP_888570.1 118470599 4532101 complement(4377492..4380491) 1 NC_008596.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 4380491 4532101 MSMEG_4293 Mycobacterium smegmatis str. MC2 155 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_888570.1 4377492 R 246196 CDS YP_888571.1 118474021 4533434 complement(4380541..4381881) 1 NC_008596.1 identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase 4381881 glnA 4533434 glnA Mycobacterium smegmatis str. MC2 155 glutamine synthetase YP_888571.1 4380541 R 246196 CDS YP_888572.1 118471683 4536445 complement(4381934..4383436) 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 4383436 4536445 MSMEG_4295 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_888572.1 4381934 R 246196 CDS YP_888573.1 118470786 4536069 complement(4383565..4385097) 1 NC_008596.1 identified by match to protein family HMM PF00561; protease 4385097 4536069 MSMEG_4296 Mycobacterium smegmatis str. MC2 155 protease YP_888573.1 4383565 R 246196 CDS YP_888574.1 118468728 4534256 complement(4385129..4386526) 1 NC_008596.1 identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; acyltransferase 4386526 4534256 MSMEG_4297 Mycobacterium smegmatis str. MC2 155 acyltransferase YP_888574.1 4385129 R 246196 CDS YP_888575.1 118467777 4535698 4386689..4387552 1 NC_008596.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 4387552 panB 4535698 panB Mycobacterium smegmatis str. MC2 155 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_888575.1 4386689 D 246196 CDS YP_888576.1 118468108 4535606 complement(4387638..4388423) 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 4388423 4535606 MSMEG_4299 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase/isomerase YP_888576.1 4387638 R 246196 CDS YP_888577.1 118470544 4532998 complement(4388435..4389112) 1 NC_008596.1 identified by match to protein family HMM PF00440; transcription regulator AmtR 4389112 4532998 MSMEG_4300 Mycobacterium smegmatis str. MC2 155 transcription regulator AmtR YP_888577.1 4388435 R 246196 CDS YP_888578.1 118473450 4534894 complement(4389120..4390904) 1 NC_008596.1 activates fatty acids by binding to coenzyme A; fatty-acid--CoA ligase 4390904 4534894 MSMEG_4301 Mycobacterium smegmatis str. MC2 155 fatty-acid--CoA ligase YP_888578.1 4389120 R 246196 CDS YP_888579.1 118468778 4535669 4391109..4392635 1 NC_008596.1 identified by match to protein family HMM PF01928; match to protein family HMM PF05235; adenylate cyclase 4392635 4535669 MSMEG_4302 Mycobacterium smegmatis str. MC2 155 adenylate cyclase YP_888579.1 4391109 D 246196 CDS YP_888580.1 118470561 4531504 complement(4393133..4394689) 1 NC_008596.1 identified by match to protein family HMM PF03848; match to protein family HMM PF05724; match to protein family HMM PF07992; methyltransferase 4394689 4531504 MSMEG_4303 Mycobacterium smegmatis str. MC2 155 methyltransferase YP_888580.1 4393133 R 246196 CDS YP_888581.1 118472940 4531756 4394755..4395333 1 NC_008596.1 identified by match to protein family HMM PF01381; match to protein family HMM PF07883; regulatory protein 4395333 4531756 MSMEG_4304 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_888581.1 4394755 D 246196 CDS YP_888582.1 118467729 4534012 complement(4395335..4396432) 1 NC_008596.1 identified by match to protein family HMM PF00300; bifunctional RNase H/acid phosphatase 4396432 4534012 MSMEG_4305 Mycobacterium smegmatis str. MC2 155 bifunctional RNase H/acid phosphatase YP_888582.1 4395335 R 246196 CDS YP_888583.1 118468416 4534558 complement(4396429..4397157) 1 NC_008596.1 identified by match to protein family HMM PF02591; hypothetical protein 4397157 4534558 MSMEG_4306 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888583.1 4396429 R 246196 CDS YP_888584.1 118471522 4537233 complement(4397147..4398298) 1 NC_008596.1 identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; hypothetical protein 4398298 4537233 MSMEG_4307 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888584.1 4397147 R 246196 CDS YP_888585.1 118471545 4537626 4398573..4399265 1 NC_008596.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549; 5'-nucleotidase 4399265 4537626 MSMEG_4308 Mycobacterium smegmatis str. MC2 155 5'-nucleotidase YP_888585.1 4398573 D 246196 CDS YP_888586.1 118473736 4537341 4399258..4399749 1 NC_008596.1 identified by match to protein family HMM PF01451; low molecular weight protein-tyrosine-phosphatase 4399749 4537341 MSMEG_4309 Mycobacterium smegmatis str. MC2 155 low molecular weight protein-tyrosine-phosphatase YP_888586.1 4399258 D 246196 CDS YP_888587.1 118470407 4534180 4399749..4400582 1 NC_008596.1 hypothetical protein 4400582 4534180 MSMEG_4311 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888587.1 4399749 D 246196 CDS YP_888588.1 118471499 4536838 complement(4400536..4401492) 1 NC_008596.1 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 4401492 cobD 4536838 cobD Mycobacterium smegmatis str. MC2 155 cobalamin biosynthesis protein YP_888588.1 4400536 R 246196 CDS YP_888589.1 118473066 4534618 4401829..4402245 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase/bleomycin resistance protein/dioxygenase 4402245 4534618 MSMEG_4313 Mycobacterium smegmatis str. MC2 155 glyoxalase/bleomycin resistance protein/dioxygenase YP_888589.1 4401829 D 246196 CDS YP_888590.1 118473245 4537305 4402310..4402825 1 NC_008596.1 hypothetical protein 4402825 4537305 MSMEG_4314 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888590.1 4402310 D 246196 CDS YP_888591.1 118467823 4534574 4402920..4403411 1 NC_008596.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; igma-70 family RNA polymerase sigma factor 4403411 4534574 MSMEG_4315 Mycobacterium smegmatis str. MC2 155 igma-70 family RNA polymerase sigma factor YP_888591.1 4402920 D 246196 CDS YP_888592.1 118468432 4535590 4403408..4403971 1 NC_008596.1 identified by match to protein family HMM PF01035; match to protein family HMM PF02870; match to protein family HMM TIGR00589; methylated-DNA--protein-cysteine methyltransferase 4403971 4535590 MSMEG_4316 Mycobacterium smegmatis str. MC2 155 methylated-DNA--protein-cysteine methyltransferase YP_888592.1 4403408 D 246196 CDS YP_888593.1 118469629 4534087 4403968..4404681 1 NC_008596.1 hypothetical protein 4404681 4534087 MSMEG_4317 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888593.1 4403968 D 246196 CDS YP_888594.1 118471460 4534379 4404837..4405655 1 NC_008596.1 hypothetical protein 4405655 4534379 MSMEG_4318 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888594.1 4404837 D 246196 CDS YP_888595.1 118473680 4531077 complement(4405907..4406377) 1 NC_008596.1 identified by match to protein family HMM PF00578; alkyl hydroperoxide reductase 4406377 4531077 MSMEG_4320 Mycobacterium smegmatis str. MC2 155 alkyl hydroperoxide reductase YP_888595.1 4405907 R 246196 CDS YP_888596.1 118471493 4536832 complement(4406378..4406815) 1 NC_008596.1 hypothetical protein 4406815 4536832 MSMEG_4321 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888596.1 4406378 R 246196 CDS YP_888597.1 118471921 4536222 complement(4406957..4407487) 1 NC_008596.1 hypothetical protein 4407487 4536222 MSMEG_4322 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888597.1 4406957 R 246196 CDS YP_888598.1 118470577 4531364 4407679..4410468 1 NC_008596.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 4410468 aceE 4531364 aceE Mycobacterium smegmatis str. MC2 155 pyruvate dehydrogenase subunit E1 YP_888598.1 4407679 D 246196 CDS YP_888599.1 118468199 4536639 4410564..4411850 1 NC_008596.1 hypothetical protein 4411850 4536639 MSMEG_4324 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888599.1 4410564 D 246196 CDS YP_888600.1 118471928 4536190 4412068..4412940 1 NC_008596.1 malonyl CoA-ACP transacylase 4412940 4536190 MSMEG_4325 Mycobacterium smegmatis str. MC2 155 malonyl CoA-ACP transacylase YP_888600.1 4412068 D 246196 CDS YP_888601.1 118471527 4537238 4413021..4413320 1 NC_008596.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 4413320 acpP 4537238 acpP Mycobacterium smegmatis str. MC2 155 acyl carrier protein YP_888601.1 4413021 D 246196 CDS YP_888602.1 118471172 4534958 4413317..4414567 1 NC_008596.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 4414567 4534958 MSMEG_4327 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP synthase YP_888602.1 4413317 D 246196 CDS YP_888603.1 118467655 4535003 4414597..4415850 1 NC_008596.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 4415850 4535003 MSMEG_4328 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP synthase YP_888603.1 4414597 D 246196 CDS YP_888604.1 118473243 4537303 4415919..4417343 1 NC_008596.1 identified by match to protein family HMM PF01039; propionyl-CoA carboxylase subunit beta 4417343 4537303 MSMEG_4329 Mycobacterium smegmatis str. MC2 155 propionyl-CoA carboxylase subunit beta YP_888604.1 4415919 D 246196 CDS YP_888605.1 118473483 4531187 complement(4417418..4418167) 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 4418167 4531187 MSMEG_4330 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_888605.1 4417418 R 246196 CDS YP_888606.1 118469273 4532243 4418265..4419254 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator 4419254 4532243 MSMEG_4331 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_888606.1 4418265 D 246196 CDS YP_888607.1 118468449 4536897 complement(4419488..4421044) 1 NC_008596.1 identified by match to protein family HMM PF01266; glycerol-3-phosphate dehydrogenase 4421044 4536897 MSMEG_4332 Mycobacterium smegmatis str. MC2 155 glycerol-3-phosphate dehydrogenase YP_888607.1 4419488 R 246196 CDS YP_888608.1 118468535 4535360 complement(4421041..4421625) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4421625 4535360 MSMEG_4333 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_888608.1 4421041 R 246196 CDS YP_888609.1 118472412 4531334 4421676..4423253 1 NC_008596.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02913; flavoprotein 4423253 4531334 MSMEG_4334 Mycobacterium smegmatis str. MC2 155 flavoprotein YP_888609.1 4421676 D 246196 CDS YP_888610.1 118473329 4530988 4423250..4424152 1 NC_008596.1 involved in the biosynthesis of phosphatidylinositol mannosides (PIMs); the enzyme from Mycobacterium tuberculosis can phosphorylate a variety of amphipathic lipids; diacylglycerol kinase 4424152 4530988 MSMEG_4335 Mycobacterium smegmatis str. MC2 155 diacylglycerol kinase YP_888610.1 4423250 D 246196 CDS YP_888611.1 118471649 4536486 complement(4424220..4424732) 1 NC_008596.1 hypothetical protein 4424732 4536486 MSMEG_4336 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888611.1 4424220 R 246196 CDS YP_888612.1 118469511 4533339 complement(4424856..4425665) 1 NC_008596.1 identified by match to protein family HMM PF00144; beta-lactamase 4425665 4533339 MSMEG_4337 Mycobacterium smegmatis str. MC2 155 beta-lactamase YP_888612.1 4424856 R 246196 CDS YP_888613.1 118467962 4532074 complement(4425730..4426827) 1 NC_008596.1 transcriptional regulatory protein 4426827 4532074 MSMEG_4338 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_888613.1 4425730 R 246196 CDS YP_888614.1 118471585 4534447 complement(4426949..4428589) 1 NC_008596.1 identified by match to protein family HMM PF00196; match to protein family HMM PF07719; hypothetical protein 4428589 4534447 MSMEG_4339 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888614.1 4426949 R 246196 CDS YP_888615.1 118472532 4534731 4428679..4429770 1 NC_008596.1 identified by match to protein family HMM PF00107; NAD/mycothiol-dependent formaldehyde dehydrogenase 4429770 4534731 MSMEG_4340 Mycobacterium smegmatis str. MC2 155 NAD/mycothiol-dependent formaldehyde dehydrogenase YP_888615.1 4428679 D 246196 CDS YP_888616.1 118468849 4535622 4429796..4430428 1 NC_008596.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase 4430428 4535622 MSMEG_4342 Mycobacterium smegmatis str. MC2 155 metallo-beta-lactamase YP_888616.1 4429796 D 246196 CDS YP_888617.1 118473394 4537012 complement(4430412..4430561) 1 NC_008596.1 hypothetical protein 4430561 4537012 MSMEG_4341 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888617.1 4430412 R 246196 CDS YP_888618.1 118469620 4531592 4430791..4432173 1 NC_008596.1 monooxygenase 4432173 4531592 MSMEG_4344 Mycobacterium smegmatis str. MC2 155 monooxygenase YP_888618.1 4430791 D 246196 CDS YP_888619.1 118470361 4534636 complement(4432170..4432934) 1 NC_008596.1 hypothetical protein 4432934 4534636 MSMEG_4343 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888619.1 4432170 R 246196 CDS YP_888620.1 118473499 4532132 complement(4432931..4433287) 1 NC_008596.1 hypothetical protein 4433287 4532132 MSMEG_4345 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888620.1 4432931 R 246196 CDS YP_888621.1 118467779 4535700 4433006..4433236 1 NC_008596.1 hypothetical protein 4433236 4535700 MSMEG_4346 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888621.1 4433006 D 246196 CDS YP_888622.1 118471040 4536742 4433239..4434321 1 NC_008596.1 hypothetical protein 4434321 4536742 MSMEG_4347 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888622.1 4433239 D 246196 CDS YP_888623.1 118469176 4534283 complement(4434329..4435885) 1 NC_008596.1 thiamine-pyrophosphate requiring enzyme; hypothetical protein 4435885 4534283 MSMEG_4348 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888623.1 4434329 R 246196 CDS YP_888624.1 118470684 4531747 complement(4435960..4437738) 1 NC_008596.1 hypothetical protein 4437738 4531747 MSMEG_4349 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888624.1 4435960 R 246196 CDS YP_888625.1 118467875 4535249 complement(4437803..4438963) 1 NC_008596.1 identified by match to protein family HMM PF01113; dihydrodipicolinate reductase 4438963 dapB 4535249 dapB Mycobacterium smegmatis str. MC2 155 dihydrodipicolinate reductase YP_888625.1 4437803 R 246196 CDS YP_888626.1 118471077 4537520 4438978..4439736 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; oxidoreductase YjgI 4439736 4537520 MSMEG_4351 Mycobacterium smegmatis str. MC2 155 oxidoreductase YjgI YP_888626.1 4438978 D 246196 CDS YP_888627.1 118473227 4536913 complement(4439737..4440798) 1 NC_008596.1 hypothetical protein 4440798 4536913 MSMEG_4352 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888627.1 4439737 R 246196 CDS YP_888628.1 118469188 4535777 complement(4440809..4441354) 1 NC_008596.1 hypothetical protein 4441354 4535777 MSMEG_4353 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888628.1 4440809 R 246196 CDS YP_888629.1 118472365 4534755 4441468..4442991 1 NC_008596.1 identified by match to protein family HMM PF00496; dipeptide-binding protein of ABC transporter 4442991 4534755 MSMEG_4354 Mycobacterium smegmatis str. MC2 155 dipeptide-binding protein of ABC transporter YP_888629.1 4441468 D 246196 CDS YP_888630.1 118470631 4532989 4442988..4443965 1 NC_008596.1 identified by match to protein family HMM PF00528; peptide ABC transporter permease 4443965 4532989 MSMEG_4355 Mycobacterium smegmatis str. MC2 155 peptide ABC transporter permease YP_888630.1 4442988 D 246196 CDS YP_888631.1 118467810 4535987 4443962..4444840 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter 4444840 4535987 MSMEG_4356 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_888631.1 4443962 D 246196 CDS YP_888632.1 118473860 4533560 4444837..4446417 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 4446417 4533560 MSMEG_4357 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_888632.1 4444837 D 246196 CDS YP_888633.1 118473143 4531204 4446420..4447160 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; D-beta-hydroxybutyrate dehydrogenase 4447160 4531204 MSMEG_4358 Mycobacterium smegmatis str. MC2 155 D-beta-hydroxybutyrate dehydrogenase YP_888633.1 4446420 D 246196 CDS YP_888634.1 118470111 4534946 complement(4447171..4447407) 1 NC_008596.1 hypothetical protein 4447407 4534946 MSMEG_4359 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888634.1 4447171 R 246196 CDS YP_888635.1 118470402 4533463 4447270..4447512 1 NC_008596.1 hypothetical protein 4447512 4533463 MSMEG_4361 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888635.1 4447270 D 246196 CDS YP_888636.1 118469648 4535058 complement(4447509..4448855) 1 NC_008596.1 hypothetical protein 4448855 4535058 MSMEG_4360 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888636.1 4447509 R 246196 CDS YP_888637.1 118471715 4536440 complement(4449005..4449823) 1 NC_008596.1 identified by match to protein family HMM PF00582; universal stress protein family protein 4449823 4536440 MSMEG_4362 Mycobacterium smegmatis str. MC2 155 universal stress protein family protein YP_888637.1 4449005 R 246196 CDS YP_888638.1 118471331 4534844 complement(4450008..4450634) 1 NC_008596.1 identified by match to protein family HMM PF07366; hypothetical protein 4450634 4534844 MSMEG_4363 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888638.1 4450008 R 246196 CDS YP_888639.1 118468867 4533752 complement(4450749..4450883) 1 NC_008596.1 hypothetical protein 4450883 4533752 MSMEG_4364 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888639.1 4450749 R 246196 CDS YP_888640.1 118470241 4536760 4450873..4453014 1 NC_008596.1 hypothetical protein 4453014 4536760 MSMEG_4365 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888640.1 4450873 D 246196 CDS YP_888641.1 118469501 4533328 complement(4453016..4454593) 1 NC_008596.1 identified by match to protein family HMM PF00069; serine/threonine protein kinase 4454593 4533328 MSMEG_4366 Mycobacterium smegmatis str. MC2 155 serine/threonine protein kinase YP_888641.1 4453016 R 246196 CDS YP_888642.1 118467862 4532884 complement(4454720..4455976) 1 NC_008596.1 identified by match to protein family HMM PF03069; formamidase 4455976 4532884 MSMEG_4367 Mycobacterium smegmatis str. MC2 155 formamidase YP_888642.1 4454720 R 246196 CDS YP_888643.1 118467699 4537337 4455986..4456396 1 NC_008596.1 hypothetical protein 4456396 4537337 MSMEG_4369 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888643.1 4455986 D 246196 CDS YP_888644.1 118468775 4535666 complement(4455998..4456285) 1 NC_008596.1 identified by match to protein family HMM TIGR02605; regulatory protein, FmdB family protein 4456285 4535666 MSMEG_4368 Mycobacterium smegmatis str. MC2 155 regulatory protein, FmdB family protein YP_888644.1 4455998 R 246196 CDS YP_888645.1 118470695 4532532 complement(4456431..4457708) 1 NC_008596.1 identified by match to protein family HMM PF07905; regulatory protein 4457708 4532532 MSMEG_4370 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_888645.1 4456431 R 246196 CDS YP_888646.1 118470752 4533655 complement(4457769..4458716) 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; vanillate O-demethylase 4458716 4533655 MSMEG_4371 Mycobacterium smegmatis str. MC2 155 vanillate O-demethylase YP_888646.1 4457769 R 246196 CDS YP_888647.1 118471677 4536478 complement(4458713..4459807) 1 NC_008596.1 identified by match to protein family HMM PF00355; capreomycidine hydroxylase 4459807 4536478 MSMEG_4372 Mycobacterium smegmatis str. MC2 155 capreomycidine hydroxylase YP_888647.1 4458713 R 246196 CDS YP_888648.1 118473517 4533879 complement(4459820..4460713) 1 NC_008596.1 identified by match to protein family HMM PF01522; polysaccharide deacetylase 4460713 4533879 MSMEG_4373 Mycobacterium smegmatis str. MC2 155 polysaccharide deacetylase YP_888648.1 4459820 R 246196 CDS YP_888649.1 118469662 4535424 complement(4460713..4461672) 1 NC_008596.1 identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; agmatinase 4461672 speB 4535424 speB Mycobacterium smegmatis str. MC2 155 agmatinase YP_888649.1 4460713 R 246196 CDS YP_888650.1 118470378 4532325 complement(4461684..4462337) 1 NC_008596.1 identified by match to protein family HMM PF00106; 3-oxoacyl-ACP reductase 4462337 4532325 MSMEG_4375 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_888650.1 4461684 R 246196 CDS YP_888651.1 118472098 4537479 complement(4462339..4463046) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; 3-oxoacyl-ACP reductase 4463046 4537479 MSMEG_4376 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_888651.1 4462339 R 246196 CDS YP_888652.1 118468953 4532616 complement(4463043..4464521) 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 4464521 4532616 MSMEG_4377 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_888652.1 4463043 R 246196 CDS YP_888653.1 118471111 4533470 4464829..4465473 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; two-component system response regulator 4465473 4533470 MSMEG_4378 Mycobacterium smegmatis str. MC2 155 two-component system response regulator YP_888653.1 4464829 D 246196 CDS YP_888654.1 118468393 4534782 4465578..4466222 1 NC_008596.1 identified by match to protein family HMM PF00857; isochorismatase hydrolase 4466222 4534782 MSMEG_4379 Mycobacterium smegmatis str. MC2 155 isochorismatase hydrolase YP_888654.1 4465578 D 246196 CDS YP_888655.1 118471389 4534983 4466375..4468300 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF06472; ABC transporter permease 4468300 4534983 MSMEG_4380 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_888655.1 4466375 D 246196 CDS YP_888656.1 118472893 4534036 4468358..4469371 1 NC_008596.1 identified by match to protein family HMM PF03069; amidase 4469371 4534036 MSMEG_4381 Mycobacterium smegmatis str. MC2 155 amidase YP_888656.1 4468358 D 246196 CDS YP_888657.1 118468809 4534065 4469384..4470145 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; dehydrogenase/reductase SDR family protein member 10 4470145 4534065 MSMEG_4382 Mycobacterium smegmatis str. MC2 155 dehydrogenase/reductase SDR family protein member 10 YP_888657.1 4469384 D 246196 CDS YP_888658.1 118467716 4537724 4470276..4473152 1 NC_008596.1 identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; MmpL5 protein 4473152 4537724 MSMEG_4383 Mycobacterium smegmatis str. MC2 155 MmpL5 protein YP_888658.1 4470276 D 246196 CDS YP_888659.1 118473877 4531125 4473309..4475720 1 NC_008596.1 identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM PF03793; penicillin binding protein transpeptidase domain-containing protein 4475720 4531125 MSMEG_4384 Mycobacterium smegmatis str. MC2 155 penicillin binding protein transpeptidase domain-containing protein YP_888659.1 4473309 D 246196 CDS YP_888660.1 118471473 4531874 4475954..4477612 1 NC_008596.1 identified by match to protein family HMM PF00496; peptide ABC transporter 4477612 4531874 MSMEG_4385 Mycobacterium smegmatis str. MC2 155 peptide ABC transporter YP_888660.1 4475954 D 246196 CDS YP_888661.1 118472041 4535386 4477609..4478577 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 4478577 4535386 MSMEG_4386 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_888661.1 4477609 D 246196 CDS YP_888662.1 118469043 4536857 4478574..4479428 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 4479428 4536857 MSMEG_4387 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_888662.1 4478574 D 246196 CDS YP_888663.1 118468510 4535491 4479425..4481053 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 4481053 4535491 MSMEG_4388 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_888663.1 4479425 D 246196 CDS YP_888664.1 118473805 4531284 4481050..4482420 1 NC_008596.1 monooxygenase, NtaA/SnaA/SoxA family protein 4482420 4531284 MSMEG_4389 Mycobacterium smegmatis str. MC2 155 monooxygenase, NtaA/SnaA/SoxA family protein YP_888664.1 4481050 D 246196 CDS YP_888665.1 118472429 4532046 4482417..4483634 1 NC_008596.1 identified by match to protein family HMM PF08028; acyl-CoA dehydrogenase 4483634 4532046 MSMEG_4391 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_888665.1 4482417 D 246196 CDS YP_888666.1 118468628 4535026 complement(4483625..4484047) 1 NC_008596.1 hypothetical protein 4484047 4535026 MSMEG_4390 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888666.1 4483625 R 246196 CDS YP_888667.1 118469627 4534085 4483869..4485146 1 NC_008596.1 identified by match to protein family HMM PF01979; organophopsphate acid anhydrase 4485146 4534085 MSMEG_4392 Mycobacterium smegmatis str. MC2 155 organophopsphate acid anhydrase YP_888667.1 4483869 D 246196 CDS YP_888668.1 118471948 4536172 4485158..4486039 1 NC_008596.1 carboxyvinyl-carboxyphosphonate phosphorylmutase 4486039 4536172 MSMEG_4393 Mycobacterium smegmatis str. MC2 155 carboxyvinyl-carboxyphosphonate phosphorylmutase YP_888668.1 4485158 D 246196 CDS YP_888669.1 118472745 4531934 complement(4486041..4486934) 1 NC_008596.1 identified by match to protein family HMM PF00126; LysR family transcriptional regulator 4486934 4531934 MSMEG_4394 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_888669.1 4486041 R 246196 CDS YP_888670.1 118469917 4535571 4487077..4487268 1 NC_008596.1 identified by match to protein family HMM PF05901; excalibur domain-containing protein 4487268 4535571 MSMEG_4395 Mycobacterium smegmatis str. MC2 155 excalibur domain-containing protein YP_888670.1 4487077 D 246196 CDS YP_888671.1 118473859 4533559 complement(4487275..4488018) 1 NC_008596.1 identified by match to protein family HMM PF00857; isochorismatase hydrolase 4488018 4533559 MSMEG_4396 Mycobacterium smegmatis str. MC2 155 isochorismatase hydrolase YP_888671.1 4487275 R 246196 CDS YP_888672.1 118467456 4536601 complement(4488131..4488526) 1 NC_008596.1 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 4488526 4536601 MSMEG_4397 Mycobacterium smegmatis str. MC2 155 MerR family transcriptional regulator YP_888672.1 4488131 R 246196 CDS YP_888673.1 118473732 4536966 4488622..4489575 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 4489575 4536966 MSMEG_4398 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888673.1 4488622 D 246196 CDS YP_888674.1 118468605 4532385 4489599..4489976 1 NC_008596.1 hypothetical protein 4489976 4532385 MSMEG_4399 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888674.1 4489599 D 246196 CDS YP_888675.1 118472290 4532762 complement(4489984..4491054) 1 NC_008596.1 identified by match to protein family HMM PF00107; alcohol dehydrogenase 4491054 4532762 MSMEG_4400 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_888675.1 4489984 R 246196 CDS YP_888676.1 118469999 4533122 complement(4491063..4491788) 1 NC_008596.1 identified by match to protein family HMM PF00702; phosphonoacetaldehyde hydrolase 4491788 4533122 MSMEG_4401 Mycobacterium smegmatis str. MC2 155 phosphonoacetaldehyde hydrolase YP_888676.1 4491063 R 246196 CDS YP_888677.1 118468431 4535589 4492467..4493168 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 4493168 4535589 MSMEG_4402 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_888677.1 4492467 D 246196 CDS YP_888678.1 118473485 4532118 complement(4493176..4494498) 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 4494498 4532118 MSMEG_4403 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_888678.1 4493176 R 246196 CDS YP_888679.1 118473297 4535168 4494217..4494771 1 NC_008596.1 hypothetical protein 4494771 4535168 MSMEG_4404 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888679.1 4494217 D 246196 CDS YP_888680.1 118472765 4531856 complement(4495047..4495622) 1 NC_008596.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; ECF sigma factor RpoE1 4495622 4531856 MSMEG_4405 Mycobacterium smegmatis str. MC2 155 ECF sigma factor RpoE1 YP_888680.1 4495047 R 246196 CDS YP_888681.1 118470153 4531712 complement(4495727..4496029) 1 NC_008596.1 UsfY protein 4496029 4531712 MSMEG_4406 Mycobacterium smegmatis str. MC2 155 UsfY protein YP_888681.1 4495727 R 246196 CDS YP_888682.1 118469740 4532025 complement(4496063..4496482) 1 NC_008596.1 hypothetical protein 4496482 4532025 MSMEG_4407 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888682.1 4496063 R 246196 CDS YP_888683.1 118469363 4535877 complement(4496500..4497018) 1 NC_008596.1 identified by match to protein family HMM PF04224; integral membrane protein 4497018 4535877 MSMEG_4408 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_888683.1 4496500 R 246196 CDS YP_888684.1 118469961 4530924 4497153..4497278 1 NC_008596.1 hypothetical protein 4497278 4530924 MSMEG_4409 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888684.1 4497153 D 246196 CDS YP_888685.1 118469237 4535373 complement(4497433..4497702) 1 NC_008596.1 hypothetical protein 4497702 4535373 MSMEG_4410 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888685.1 4497433 R 246196 CDS YP_888686.1 118467645 4534993 complement(4497720..4498460) 1 NC_008596.1 identified by match to protein family HMM PF00175; match to protein family HMM PF00970; oxidoreductase FAD-binding region 4498460 4534993 MSMEG_4411 Mycobacterium smegmatis str. MC2 155 oxidoreductase FAD-binding region YP_888686.1 4497720 R 246196 CDS YP_888687.1 118470984 4531904 complement(4498464..4499063) 1 NC_008596.1 identified by match to protein family HMM PF00174; oxidoreductase, molybdopterin binding 4499063 4531904 MSMEG_4412 Mycobacterium smegmatis str. MC2 155 oxidoreductase, molybdopterin binding YP_888687.1 4498464 R 246196 CDS YP_888688.1 118472953 4531770 complement(4499073..4499372) 1 NC_008596.1 hypothetical protein 4499372 4531770 MSMEG_4413 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888688.1 4499073 R 246196 CDS YP_888689.1 118471581 4534443 complement(4499356..4499895) 1 NC_008596.1 hypothetical protein 4499895 4534443 MSMEG_4414 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888689.1 4499356 R 246196 CDS YP_888690.1 118469773 4535797 complement(4499892..4501004) 1 NC_008596.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; transaldolase 4501004 tal 4535797 tal Mycobacterium smegmatis str. MC2 155 transaldolase YP_888690.1 4499892 R 246196 CDS YP_888691.1 118472356 4531607 complement(4501001..4501126) 1 NC_008596.1 hypothetical protein 4501126 4531607 MSMEG_4416 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888691.1 4501001 R 246196 CDS YP_888692.1 118470518 4536110 complement(4501152..4501721) 1 NC_008596.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 4501721 msrA 4536110 msrA Mycobacterium smegmatis str. MC2 155 methionine sulfoxide reductase A YP_888692.1 4501152 R 246196 CDS YP_888693.1 118468807 4534063 complement(4501718..4502212) 1 NC_008596.1 identified by match to protein family HMM PF01641; match to protein family HMM TIGR00357; methionine-R-sulfoxide reductase 4502212 msrB 4534063 msrB Mycobacterium smegmatis str. MC2 155 methionine-R-sulfoxide reductase YP_888693.1 4501718 R 246196 CDS YP_888694.1 118473103 4531164 complement(4502235..4503035) 1 NC_008596.1 identified by match to protein family HMM PF00106; glucose-1-dehydrogenase 4503035 4531164 MSMEG_4419 Mycobacterium smegmatis str. MC2 155 glucose-1-dehydrogenase YP_888694.1 4502235 R 246196 CDS YP_888695.1 118472613 4537263 4503248..4503682 1 NC_008596.1 identified by match to protein family HMM PF07883; cupin 4503682 4537263 MSMEG_4420 Mycobacterium smegmatis str. MC2 155 cupin YP_888695.1 4503248 D 246196 CDS YP_888696.1 118469423 4534319 4503695..4504246 1 NC_008596.1 hypothetical protein 4504246 4534319 MSMEG_4421 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888696.1 4503695 D 246196 CDS YP_888697.1 118471633 4536508 4504237..4505727 1 NC_008596.1 identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF07992; oxidoreductase 4505727 4536508 MSMEG_4422 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_888697.1 4504237 D 246196 CDS YP_888698.1 118473951 4533897 4505724..4506692 1 NC_008596.1 oxidoreductase 4506692 4533897 MSMEG_4423 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_888698.1 4505724 D 246196 CDS YP_888699.1 118472487 4532438 4506742..4507137 1 NC_008596.1 identified by match to protein family HMM PF01042; endoribonuclease L-PSP 4507137 4532438 MSMEG_4424 Mycobacterium smegmatis str. MC2 155 endoribonuclease L-PSP YP_888699.1 4506742 D 246196 CDS YP_888700.1 118467871 4532893 4507134..4507535 1 NC_008596.1 oxidoreductase 4507535 4532893 MSMEG_4425 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_888700.1 4507134 D 246196 CDS YP_888701.1 118472030 4534110 4507529..4508977 1 NC_008596.1 identified by match to protein family HMM PF07690; transmembrane efflux pump 4508977 4534110 MSMEG_4427 Mycobacterium smegmatis str. MC2 155 transmembrane efflux pump YP_888701.1 4507529 D 246196 CDS YP_888702.1 118471291 4532185 complement(4508963..4509754) 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; hypothetical protein 4509754 4532185 MSMEG_4426 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888702.1 4508963 R 246196 CDS YP_888703.1 118472475 4533842 complement(4509784..4510221) 1 NC_008596.1 hypothetical protein 4510221 4533842 MSMEG_4428 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888703.1 4509784 R 246196 CDS YP_888704.1 118469002 4536052 complement(4510350..4510757) 1 NC_008596.1 hypothetical protein 4510757 4536052 MSMEG_4429 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888704.1 4510350 R 246196 CDS YP_888705.1 118469421 4534317 complement(4510896..4513175) 1 NC_008596.1 identified by match to protein family HMM PF00196; match to protein family HMM PF07719; match to protein family HMM PF07721; transcriptional regulator 4513175 4534317 MSMEG_4430 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_888705.1 4510896 R 246196 CDS YP_888706.1 118471285 4532179 complement(4513754..4516585) 1 NC_008596.1 identified by match to protein family HMM PF00196; regulatory protein 4516585 4532179 MSMEG_4431 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_888706.1 4513754 R 246196 CDS YP_888707.1 118471423 4532806 complement(4516598..4516756) 1 NC_008596.1 hypothetical protein 4516756 4532806 MSMEG_4432 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888707.1 4516598 R 246196 CDS YP_888708.1 118473189 4533306 4516806..4518224 1 NC_008596.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; dehydrogenase 4518224 4533306 MSMEG_4433 Mycobacterium smegmatis str. MC2 155 dehydrogenase YP_888708.1 4516806 D 246196 CDS YP_888709.1 118468887 4536680 4518221..4519033 1 NC_008596.1 identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; Cof protein 4519033 4536680 MSMEG_4434 Mycobacterium smegmatis str. MC2 155 Cof protein YP_888709.1 4518221 D 246196 CDS YP_888710.1 118467500 4537387 complement(4519067..4519702) 1 NC_008596.1 dimethylmenaquinone methyltransferase 4519702 4537387 MSMEG_4435 Mycobacterium smegmatis str. MC2 155 dimethylmenaquinone methyltransferase YP_888710.1 4519067 R 246196 CDS YP_888711.1 118471905 4536243 complement(4519702..4521636) 1 NC_008596.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 4521636 4536243 MSMEG_4436 Mycobacterium smegmatis str. MC2 155 transketolase YP_888711.1 4519702 R 246196 CDS YP_888712.1 118472583 4534363 complement(4521629..4523380) 1 NC_008596.1 identified by match to protein family HMM PF00115; match to protein family HMM TIGR02891; cytochrome C oxidase subunit I 4523380 ctaD 4534363 ctaD Mycobacterium smegmatis str. MC2 155 cytochrome C oxidase subunit I YP_888712.1 4521629 R 246196 CDS YP_888713.1 118467951 4532062 complement(4523377..4523499) 1 NC_008596.1 hypothetical protein 4523499 4532062 MSMEG_4438 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888713.1 4523377 R 246196 CDS YP_888714.1 118468081 4533028 complement(4523543..4524148) 1 NC_008596.1 identified by match to protein family HMM PF00583; acetyltransferase 4524148 4533028 MSMEG_4439 Mycobacterium smegmatis str. MC2 155 acetyltransferase YP_888714.1 4523543 R 246196 CDS YP_888715.1 118468645 4533577 complement(4524154..4524924) 1 NC_008596.1 identified by match to protein family HMM PF00106; glucose-1-dehydrogenase 4524924 4533577 MSMEG_4440 Mycobacterium smegmatis str. MC2 155 glucose-1-dehydrogenase YP_888715.1 4524154 R 246196 CDS YP_888716.1 118469573 4531447 complement(4524954..4525862) 1 NC_008596.1 identified by match to protein family HMM PF07883; cupin 4525862 4531447 MSMEG_4441 Mycobacterium smegmatis str. MC2 155 cupin YP_888716.1 4524954 R 246196 CDS YP_888717.1 118470272 4537533 4525862..4526827 1 NC_008596.1 hypothetical protein 4526827 4537533 MSMEG_4444 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888717.1 4525862 D 246196 CDS YP_888718.1 118470757 4533660 complement(4525892..4526812) 1 NC_008596.1 identified by match to protein family HMM PF00107; zinc-binding oxidoreductase 4526812 4533660 MSMEG_4442 Mycobacterium smegmatis str. MC2 155 zinc-binding oxidoreductase YP_888718.1 4525892 R 246196 CDS YP_888719.1 118473139 4531200 complement(4526809..4527093) 1 NC_008596.1 hypothetical protein 4527093 4531200 MSMEG_4443 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888719.1 4526809 R 246196 CDS YP_888720.1 118473926 4537364 complement(4527220..4527378) 1 NC_008596.1 hypothetical protein 4527378 4537364 MSMEG_4445 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888720.1 4527220 R 246196 CDS YP_888721.1 118469107 4535300 4528883..4529092 1 NC_008596.1 hypothetical protein 4529092 4535300 MSMEG_4447 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888721.1 4528883 D 246196 CDS YP_888722.1 118470301 4533359 4529095..4529424 1 NC_008596.1 identified by match to protein family HMM PF02452; transcriptional modulator of MazE 4529424 4533359 MSMEG_4448 Mycobacterium smegmatis str. MC2 155 transcriptional modulator of MazE YP_888722.1 4529095 D 246196 CDS YP_888723.1 118467679 4536945 complement(4529467..4530054) 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 4530054 4536945 MSMEG_4449 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_888723.1 4529467 R 246196 CDS YP_888724.1 118473194 4533311 4530136..4531071 1 NC_008596.1 alpha/beta hydrolase 4531071 4533311 MSMEG_4450 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_888724.1 4530136 D 246196 CDS YP_888725.1 118473891 4536586 4531068..4532780 1 NC_008596.1 monooxygenase 4532780 4536586 MSMEG_4451 Mycobacterium smegmatis str. MC2 155 monooxygenase YP_888725.1 4531068 D 246196 CDS YP_888726.1 118469070 4537256 4533018..4533377 1 NC_008596.1 hypothetical protein 4533377 4537256 MSMEG_4453 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888726.1 4533018 D 246196 CDS YP_888727.1 118468541 4536092 4533404..4534420 1 NC_008596.1 identified by similarity to SP:O50584; match to protein family HMM PF00282; match to protein family HMM PF01212; L-threonine aldolase 4534420 ltaE 4536092 ltaE Mycobacterium smegmatis str. MC2 155 L-threonine aldolase YP_888727.1 4533404 D 246196 CDS YP_888728.1 118467985 4535167 4534603..4535847 1 NC_008596.1 identified by match to protein family HMM PF00144; beta-lactamase 4535847 4535167 MSMEG_4455 Mycobacterium smegmatis str. MC2 155 beta-lactamase YP_888728.1 4534603 D 246196 CDS YP_888729.1 118473828 4531982 complement(4535851..4536666) 1 NC_008596.1 hypothetical protein 4536666 4531982 MSMEG_4456 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888729.1 4535851 R 246196 CDS YP_888730.1 118472421 4531343 complement(4536707..4537615) 1 NC_008596.1 identified by match to protein family HMM PF01037; AsnC family transcriptional regulator 4537615 4531343 MSMEG_4457 Mycobacterium smegmatis str. MC2 155 AsnC family transcriptional regulator YP_888730.1 4536707 R 246196 CDS YP_888731.1 118470030 4531645 4537835..4539388 1 NC_008596.1 identified by match to protein family HMM PF02133; transmembrane transporter 4539388 4531645 MSMEG_4458 Mycobacterium smegmatis str. MC2 155 transmembrane transporter YP_888731.1 4537835 D 246196 CDS YP_888732.1 118472833 4537057 4539385..4540344 1 NC_008596.1 identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; agmatinase 4540344 speB 4537057 speB Mycobacterium smegmatis str. MC2 155 agmatinase YP_888732.1 4539385 D 246196 CDS YP_888733.1 118472190 4533728 4540344..4541966 1 NC_008596.1 identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; acetolactate synthase 4541966 4533728 MSMEG_4460 Mycobacterium smegmatis str. MC2 155 acetolactate synthase YP_888733.1 4540344 D 246196 CDS YP_888734.1 118469168 4534754 4541971..4543458 1 NC_008596.1 identified by match to protein family HMM PF00474; sodium:solute symporter 4543458 4534754 MSMEG_4462 Mycobacterium smegmatis str. MC2 155 sodium:solute symporter YP_888734.1 4541971 D 246196 CDS YP_888735.1 118472614 4537264 complement(4543424..4544110) 1 NC_008596.1 identified by match to protein family HMM TIGR02206; hypothetical protein 4544110 4537264 MSMEG_4461 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888735.1 4543424 R 246196 CDS YP_888736.1 118471888 4536264 complement(4544142..4545503) 1 NC_008596.1 CalR5 protein 4545503 4536264 MSMEG_4463 Mycobacterium smegmatis str. MC2 155 CalR5 protein YP_888736.1 4544142 R 246196 CDS YP_888737.1 118469970 4535744 complement(4545500..4547017) 1 NC_008596.1 identified by match to protein family HMM PF01523; modulator of DNA gyrase 4547017 4535744 MSMEG_4464 Mycobacterium smegmatis str. MC2 155 modulator of DNA gyrase YP_888737.1 4545500 R 246196 CDS YP_888738.1 118468002 4531322 complement(4547090..4547860) 1 NC_008596.1 identified by match to protein family HMM PF01083; match to protein family HMM PF02230; cutinase 4547860 4531322 MSMEG_4465 Mycobacterium smegmatis str. MC2 155 cutinase YP_888738.1 4547090 R 246196 CDS YP_888739.1 118471050 4536752 4548039..4548956 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 4548956 4536752 MSMEG_4466 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_888739.1 4548039 D 246196 CDS YP_888740.1 118471788 4536359 4548976..4549770 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 4549770 4536359 MSMEG_4467 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_888740.1 4548976 D 246196 CDS YP_888741.1 118473285 4535547 4549859..4551151 1 NC_008596.1 identified by match to protein family HMM PF01547; extracellular solute-binding protein UspC 4551151 4535547 MSMEG_4468 Mycobacterium smegmatis str. MC2 155 extracellular solute-binding protein UspC YP_888741.1 4549859 D 246196 CDS YP_888742.1 118472300 4532772 complement(4551156..4552001) 1 NC_008596.1 identified by match to protein family HMM PF02361; cobalt transporter 4552001 4532772 MSMEG_4469 Mycobacterium smegmatis str. MC2 155 cobalt transporter YP_888742.1 4551156 R 246196 CDS YP_888743.1 118469060 4537246 complement(4551998..4554037) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter 4554037 4537246 MSMEG_4470 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_888743.1 4551998 R 246196 CDS YP_888744.1 118470155 4531714 4554168..4554617 1 NC_008596.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 4554617 4531714 MSMEG_4471 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_888744.1 4554168 D 246196 CDS YP_888745.1 118467821 4534572 4554636..4555844 1 NC_008596.1 identified by match to protein family HMM PF07690; multidrug-efflux transporter protein 4555844 4534572 MSMEG_4472 Mycobacterium smegmatis str. MC2 155 multidrug-efflux transporter protein YP_888745.1 4554636 D 246196 CDS YP_888746.1 118472071 4536711 complement(4555859..4556590) 1 NC_008596.1 identified by match to protein family HMM PF01988; integral membrane protein 4556590 4536711 MSMEG_4473 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_888746.1 4555859 R 246196 CDS YP_888747.1 118473351 4532017 4556672..4558594 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF01756; match to protein family HMM PF02770; acyl-CoA oxidase 4558594 4532017 MSMEG_4474 Mycobacterium smegmatis str. MC2 155 acyl-CoA oxidase YP_888747.1 4556672 D 246196 CDS YP_888748.1 118471872 4536248 complement(4558601..4559080) 1 NC_008596.1 LppP protein 4559080 4536248 MSMEG_4475 Mycobacterium smegmatis str. MC2 155 LppP protein YP_888748.1 4558601 R 246196 CDS YP_888749.1 118468227 4537042 4559240..4559560 1 NC_008596.1 hypothetical protein 4559560 4537042 MSMEG_4476 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888749.1 4559240 D 246196 CDS YP_888750.1 118473078 4533152 complement(4559577..4561130) 1 NC_008596.1 identified by match to protein family HMM PF00561; hydrolase, alpha/beta hydrolase fold family protein 4561130 4533152 MSMEG_4477 Mycobacterium smegmatis str. MC2 155 hydrolase, alpha/beta hydrolase fold family protein YP_888750.1 4559577 R 246196 CDS YP_888751.1 118469010 4536061 4561426..4561695 1 NC_008596.1 hypothetical protein 4561695 4536061 MSMEG_4479 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888751.1 4561426 D 246196 CDS YP_888752.1 118471194 4531488 complement(4561717..4561908) 1 NC_008596.1 hypothetical protein 4561908 4531488 MSMEG_4480 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888752.1 4561717 R 246196 CDS YP_888753.1 118473789 4531267 4561918..4562061 1 NC_008596.1 hypothetical protein 4562061 4531267 MSMEG_4481 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888753.1 4561918 D 246196 CDS YP_888754.1 118469474 4535737 complement(4562121..4564031) 1 NC_008596.1 synthesizes RNA primers at the replication forks; DNA primase 4564031 dnaG 4535737 dnaG Mycobacterium smegmatis str. MC2 155 DNA primase YP_888754.1 4562121 R 246196 CDS YP_888755.1 118470063 4535956 complement(4564085..4565371) 1 NC_008596.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 4565371 4535956 MSMEG_4483 Mycobacterium smegmatis str. MC2 155 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_888755.1 4564085 R 246196 CDS YP_888756.1 118471886 4536262 4565431..4567473 1 NC_008596.1 identified by match to protein family HMM PF04536; transmembrane protein 4567473 4536262 MSMEG_4484 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_888756.1 4565431 D 246196 CDS YP_888757.1 118468169 4535041 complement(4567679..4569064) 1 NC_008596.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 4569064 glyS 4535041 glyS Mycobacterium smegmatis str. MC2 155 glycyl-tRNA synthetase YP_888757.1 4567679 R 246196 CDS YP_888758.1 118468406 4534548 4569200..4569544 1 NC_008596.1 identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 4569544 4534548 MSMEG_4486 Mycobacterium smegmatis str. MC2 155 ArsR family transcriptional regulator YP_888758.1 4569200 D 246196 CDS YP_888759.1 118470711 4533926 4569541..4569951 1 NC_008596.1 identified by match to protein family HMM PF01475; ferric uptake regulation protein 4569951 4533926 MSMEG_4487 Mycobacterium smegmatis str. MC2 155 ferric uptake regulation protein YP_888759.1 4569541 D 246196 CDS YP_888760.1 118471462 4534381 complement(4569965..4570369) 1 NC_008596.1 identified by match to protein family HMM PF00293; hydrolase, nudix family protein 4570369 4534381 MSMEG_4488 Mycobacterium smegmatis str. MC2 155 hydrolase, nudix family protein YP_888760.1 4569965 R 246196 CDS YP_888761.1 118473659 4531230 complement(4570366..4570830) 1 NC_008596.1 hypothetical protein 4570830 4531230 MSMEG_4489 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888761.1 4570366 R 246196 CDS YP_888762.1 118468831 4535408 complement(4570835..4571716) 1 NC_008596.1 catalyzes the formation of UDP pyrophosphate from isopentenyl pyrophosphate; UDP pyrophosphate synthase 4571716 uppS 4535408 uppS Mycobacterium smegmatis str. MC2 155 UDP pyrophosphate synthase YP_888762.1 4570835 R 246196 CDS YP_888763.1 118467581 4532871 complement(4571664..4572506) 1 NC_008596.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 4572506 recO 4532871 recO Mycobacterium smegmatis str. MC2 155 DNA repair protein RecO YP_888763.1 4571664 R 246196 CDS YP_888764.1 118469924 4535578 4572567..4574156 1 NC_008596.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 4574156 4535578 MSMEG_4492 Mycobacterium smegmatis str. MC2 155 amidase YP_888764.1 4572567 D 246196 CDS YP_888765.1 118473995 4531439 complement(4574188..4575093) 1 NC_008596.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 4575093 era 4531439 era Mycobacterium smegmatis str. MC2 155 GTP-binding protein Era YP_888765.1 4574188 R 246196 CDS YP_888766.1 118471437 4535112 complement(4575100..4575417) 1 NC_008596.1 hypothetical protein 4575417 4535112 MSMEG_4494 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888766.1 4575100 R 246196 CDS YP_888767.1 118472902 4533771 complement(4575410..4576780) 1 NC_008596.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; hypothetical protein 4576780 4533771 MSMEG_4495 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888767.1 4575410 R 246196 CDS YP_888768.1 118467556 4535510 complement(4576777..4577313) 1 NC_008596.1 identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043; metalloprotease 4577313 4535510 MSMEG_4496 Mycobacterium smegmatis str. MC2 155 metalloprotease YP_888768.1 4576777 R 246196 CDS YP_888769.1 118468558 4533692 complement(4577310..4578356) 1 NC_008596.1 identified by match to protein family HMM PF00013; match to protein family HMM PF02562; PhoH family protein 4578356 4533692 MSMEG_4497 Mycobacterium smegmatis str. MC2 155 PhoH family protein YP_888769.1 4577310 R 246196 CDS YP_888770.1 118468958 4532621 4578360..4578452 1 NC_008596.1 hypothetical protein 4578452 4532621 MSMEG_4498 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888770.1 4578360 D 246196 CDS YP_888771.1 118469905 4535559 4578490..4578738 1 NC_008596.1 hypothetical protein 4578738 4535559 MSMEG_4500 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888771.1 4578490 D 246196 CDS YP_888772.1 118468614 4535012 complement(4578517..4578684) 1 NC_008596.1 hypothetical protein 4578684 4535012 MSMEG_4499 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888772.1 4578517 R 246196 CDS YP_888773.1 118469979 4535753 complement(4578798..4580165) 1 NC_008596.1 identified by match to protein family HMM PF00375; sodium:dicarboxylate symporter 4580165 4535753 MSMEG_4501 Mycobacterium smegmatis str. MC2 155 sodium:dicarboxylate symporter YP_888773.1 4578798 R 246196 CDS YP_888774.1 118467378 4533849 4580149..4580292 1 NC_008596.1 hypothetical protein 4580292 4533849 MSMEG_4503 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888774.1 4580149 D 246196 CDS YP_888775.1 118468490 4537679 complement(4580289..4581029) 1 NC_008596.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 4581029 4537679 MSMEG_4502 Mycobacterium smegmatis str. MC2 155 16S ribosomal RNA methyltransferase RsmE YP_888775.1 4580289 R 246196 CDS YP_888776.1 118471195 4531489 complement(4581049..4582194) 1 NC_008596.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 4582194 dnaJ 4531489 dnaJ Mycobacterium smegmatis str. MC2 155 molecular chaperone DnaJ YP_888776.1 4581049 R 246196 CDS YP_888777.1 118472363 4531615 complement(4582259..4583290) 1 NC_008596.1 negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 4583290 hrcA 4531615 hrcA Mycobacterium smegmatis str. MC2 155 heat-inducible transcription repressor YP_888777.1 4582259 R 246196 CDS YP_888778.1 118467892 4531248 complement(4583328..4583459) 1 NC_008596.1 hypothetical protein 4583459 4531248 MSMEG_4506 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888778.1 4583328 R 246196 CDS YP_888779.1 118469715 4537220 4583484..4583798 1 NC_008596.1 hypothetical protein 4583798 4537220 MSMEG_4507 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888779.1 4583484 D 246196 CDS YP_888780.1 118470732 4533283 complement(4583805..4584014) 1 NC_008596.1 identified by match to protein family HMM PF03621; hypothetical protein 4584014 4533283 MSMEG_4508 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888780.1 4583805 R 246196 CDS YP_888781.1 118467820 4534571 complement(4583992..4585299) 1 NC_008596.1 MbtG protein 4585299 4534571 MSMEG_4509 Mycobacterium smegmatis str. MC2 155 MbtG protein YP_888781.1 4583992 R 246196 CDS YP_888782.1 118470694 4532531 complement(4585320..4589759) 1 NC_008596.1 identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733; peptide synthetase mbtf 4589759 4532531 MSMEG_4510 Mycobacterium smegmatis str. MC2 155 peptide synthetase mbtf YP_888782.1 4585320 R 246196 CDS YP_888783.1 118470602 4532105 complement(4589756..4595215) 1 NC_008596.1 identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733; linear gramicidin synthetase subunit B 4595215 4532105 MSMEG_4511 Mycobacterium smegmatis str. MC2 155 linear gramicidin synthetase subunit B YP_888783.1 4589756 R 246196 CDS YP_888784.1 118473284 4535546 complement(4595208..4598201) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; polyketide synthase 4598201 4535546 MSMEG_4512 Mycobacterium smegmatis str. MC2 155 polyketide synthase YP_888784.1 4595208 R 246196 CDS YP_888785.1 118468534 4535359 complement(4598198..4599499) 1 NC_008596.1 identified by match to protein family HMM PF00109; match to protein family HMM PF02801; polyketide synthase 4599499 4535359 MSMEG_4513 Mycobacterium smegmatis str. MC2 155 polyketide synthase YP_888785.1 4598198 R 246196 CDS YP_888786.1 118470897 4537571 complement(4599486..4600232) 1 NC_008596.1 identified by match to protein family HMM PF00975; thioesterase 4600232 4537571 MSMEG_4514 Mycobacterium smegmatis str. MC2 155 thioesterase YP_888786.1 4599486 R 246196 CDS YP_888787.1 118469771 4532835 complement(4600229..4603738) 1 NC_008596.1 identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733; non-ribosomal peptide synthetase 4603738 4532835 MSMEG_4515 Mycobacterium smegmatis str. MC2 155 non-ribosomal peptide synthetase YP_888787.1 4600229 R 246196 CDS YP_888788.1 118468444 4536892 4603836..4605512 1 NC_008596.1 identified by match to protein family HMM PF00501; 2,3-dihydroxybenzoate-AMP ligase 4605512 4536892 MSMEG_4516 Mycobacterium smegmatis str. MC2 155 2,3-dihydroxybenzoate-AMP ligase YP_888788.1 4603836 D 246196 CDS YP_888789.1 118472737 4532366 complement(4605520..4606146) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4606146 4532366 MSMEG_4517 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_888789.1 4605520 R 246196 CDS YP_888790.1 118471591 4536542 4606212..4606742 1 NC_008596.1 hypothetical protein 4606742 4536542 MSMEG_4518 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888790.1 4606212 D 246196 CDS YP_888791.1 118469674 4535436 4606739..4607761 1 NC_008596.1 NrtC protein 4607761 4535436 MSMEG_4519 Mycobacterium smegmatis str. MC2 155 NrtC protein YP_888791.1 4606739 D 246196 CDS YP_888792.1 118469827 4532853 4607737..4608453 1 NC_008596.1 identified by match to protein family HMM PF00005; sulfate/thiosulfate import ATP-binding protein CysA 4608453 4532853 MSMEG_4520 Mycobacterium smegmatis str. MC2 155 sulfate/thiosulfate import ATP-binding protein CysA YP_888792.1 4607737 D 246196 CDS YP_888793.1 118471366 4535273 4608450..4609616 1 NC_008596.1 identified by match to protein family HMM TIGR01409; Tat (twin-arginine translocation) pathway signal sequence 4609616 4535273 MSMEG_4521 Mycobacterium smegmatis str. MC2 155 Tat (twin-arginine translocation) pathway signal sequence YP_888793.1 4608450 D 246196 CDS YP_888794.1 118472106 4537487 4609613..4610410 1 NC_008596.1 identified by match to protein family HMM PF00528; binding-protein-dependent transporters inner membrane component 4610410 4537487 MSMEG_4523 Mycobacterium smegmatis str. MC2 155 binding-protein-dependent transporters inner membrane component YP_888794.1 4609613 D 246196 CDS YP_888795.1 118469897 4533216 complement(4610407..4611492) 1 NC_008596.1 identified by similarity to GB:CAD18826.1; ISMsm2, transposase 4611492 4533216 MSMEG_4522 Mycobacterium smegmatis str. MC2 155 ISMsm2, transposase YP_888795.1 4610407 R 246196 CDS YP_888796.1 118473231 4536918 complement(4611535..4612887) 1 NC_008596.1 catalyzes conversion of chorismate to salicylate, in mycobactin siderophore construction; requires Mg(2+) for function; salicylate synthase MbtI 4612887 4536918 MSMEG_4524 Mycobacterium smegmatis str. MC2 155 salicylate synthase MbtI YP_888796.1 4611535 R 246196 CDS YP_888797.1 118473719 4536953 complement(4612935..4614107) 1 NC_008596.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 4614107 4536953 MSMEG_4525 Mycobacterium smegmatis str. MC2 155 coproporphyrinogen III oxidase YP_888797.1 4612935 R 246196 CDS YP_888798.1 118469863 4530901 complement(4614343..4614474) 1 NC_008596.1 hypothetical protein 4614474 4530901 MSMEG_4526 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888798.1 4614343 R 246196 CDS YP_888799.1 118471944 4536168 4614429..4616138 1 NC_008596.1 identified by match to protein family HMM PF01077; match to protein family HMM PF03460; ferredoxin sulfite reductase 4616138 4536168 MSMEG_4527 Mycobacterium smegmatis str. MC2 155 ferredoxin sulfite reductase YP_888799.1 4614429 D 246196 CDS YP_888800.1 118472527 4534726 4616144..4616854 1 NC_008596.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 4616854 4534726 MSMEG_4528 Mycobacterium smegmatis str. MC2 155 phosphoadenosine phosphosulfate reductase YP_888800.1 4616144 D 246196 CDS YP_888801.1 118468708 4534698 4616851..4617564 1 NC_008596.1 identified by match to protein family HMM PF01903; hypothetical protein 4617564 4534698 MSMEG_4529 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888801.1 4616851 D 246196 CDS YP_888802.1 118470597 4532099 complement(4617583..4618668) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM TIGR00968; sulfate ABC transporter ATP-binding protein 4618668 cysA 4532099 cysA Mycobacterium smegmatis str. MC2 155 sulfate ABC transporter ATP-binding protein YP_888802.1 4617583 R 246196 CDS YP_888803.1 118470761 4533664 complement(4618684..4619508) 1 NC_008596.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140; sulfate ABC transporter permease CysW 4619508 cysW 4533664 cysW Mycobacterium smegmatis str. MC2 155 sulfate ABC transporter permease CysW YP_888803.1 4618684 R 246196 CDS YP_888804.1 118469931 4535842 complement(4619505..4620362) 1 NC_008596.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02139; sulfate ABC transporter permease CysT 4620362 cysT 4535842 cysT Mycobacterium smegmatis str. MC2 155 sulfate ABC transporter permease CysT YP_888804.1 4619505 R 246196 CDS YP_888805.1 118468850 4535623 complement(4620359..4621408) 1 NC_008596.1 identified by match to protein family HMM TIGR00971; sulfate-binding protein 4621408 4535623 MSMEG_4533 Mycobacterium smegmatis str. MC2 155 sulfate-binding protein YP_888805.1 4620359 R 246196 CDS YP_888806.1 118467547 4536009 complement(4621748..4621951) 1 NC_008596.1 hypothetical protein 4621951 4536009 MSMEG_4534 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888806.1 4621748 R 246196 CDS YP_888807.1 118470232 4533923 4622057..4624063 1 NC_008596.1 identified by match to protein family HMM PF00723; glycoside hydrolase 4624063 4533923 MSMEG_4535 Mycobacterium smegmatis str. MC2 155 glycoside hydrolase YP_888807.1 4622057 D 246196 CDS YP_888808.1 118471171 4534957 complement(4624067..4625287) 1 NC_008596.1 hypothetical protein 4625287 4534957 MSMEG_4536 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888808.1 4624067 R 246196 CDS YP_888809.1 118468560 4533694 4625673..4626596 1 NC_008596.1 major membrane protein I 4626596 4533694 MSMEG_4537 Mycobacterium smegmatis str. MC2 155 major membrane protein I YP_888809.1 4625673 D 246196 CDS YP_888810.1 118472434 4532051 4626583..4628262 1 NC_008596.1 identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM TIGR01979; cysteine desulfurase 4628262 4532051 MSMEG_4538 Mycobacterium smegmatis str. MC2 155 cysteine desulfurase YP_888810.1 4626583 D 246196 CDS YP_888811.1 118467845 4535472 4628345..4629451 1 NC_008596.1 alkanesulfonate monooxygenase 4629451 4535472 MSMEG_4539 Mycobacterium smegmatis str. MC2 155 alkanesulfonate monooxygenase YP_888811.1 4628345 D 246196 CDS YP_888812.1 118468635 4533567 4629448..4630668 1 NC_008596.1 identified by match to protein family HMM PF00583; hypothetical protein 4630668 4533567 MSMEG_4540 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888812.1 4629448 D 246196 CDS YP_888813.1 118470360 4534635 4630773..4632392 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 4632392 4534635 MSMEG_4541 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_888813.1 4630773 D 246196 CDS YP_888814.1 118471098 4535863 4632389..4633327 1 NC_008596.1 identified by match to protein family HMM PF00528; oligopeptide transport integral membrane protein 4633327 4535863 MSMEG_4542 Mycobacterium smegmatis str. MC2 155 oligopeptide transport integral membrane protein YP_888814.1 4632389 D 246196 CDS YP_888815.1 118473349 4532015 4633332..4634315 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter 4634315 4532015 MSMEG_4543 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_888815.1 4633332 D 246196 CDS YP_888816.1 118468182 4534396 4634344..4636113 1 NC_008596.1 identified by match to protein family HMM PF00496; extracellular solute-binding protein 4636113 4534396 MSMEG_4545 Mycobacterium smegmatis str. MC2 155 extracellular solute-binding protein YP_888816.1 4634344 D 246196 CDS YP_888817.1 118472858 4537454 complement(4636110..4636661) 1 NC_008596.1 identified by match to protein family HMM PF05175; match to protein family HMM PF05724; methyltransferase small subunit 4636661 4537454 MSMEG_4544 Mycobacterium smegmatis str. MC2 155 methyltransferase small subunit YP_888817.1 4636110 R 246196 CDS YP_888818.1 118467965 4532077 complement(4637637..4638872) 1 NC_008596.1 identified by match to protein family HMM PF08028; acyl-CoA dehydrogenase 4638872 4532077 MSMEG_4547 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_888818.1 4637637 R 246196 CDS YP_888819.1 118469911 4535565 complement(4638869..4639852) 1 NC_008596.1 identified by match to protein family HMM PF00583; acetyltransferase, gnat family protein 4639852 4535565 MSMEG_4548 Mycobacterium smegmatis str. MC2 155 acetyltransferase, gnat family protein YP_888819.1 4638869 R 246196 CDS YP_888820.1 118473937 4537375 complement(4639849..4641354) 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 4641354 4537375 MSMEG_4549 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_888820.1 4639849 R 246196 CDS YP_888821.1 118469036 4536850 4641611..4642816 1 NC_008596.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; transposase 4642816 4536850 MSMEG_4550 Mycobacterium smegmatis str. MC2 155 transposase YP_888821.1 4641611 D 246196 CDS YP_888822.1 118469484 4534458 complement(4642947..4644329) 1 NC_008596.1 monoxygenase 4644329 4534458 MSMEG_4551 Mycobacterium smegmatis str. MC2 155 monoxygenase YP_888822.1 4642947 R 246196 CDS YP_888823.1 118470450 4534513 complement(4644326..4645630) 1 NC_008596.1 identified by match to protein family HMM PF00296; nitrilotriacetate monooxygenase component A 4645630 ssuD 4534513 ssuD Mycobacterium smegmatis str. MC2 155 nitrilotriacetate monooxygenase component A YP_888823.1 4644326 R 246196 CDS YP_888824.1 118471851 4536266 4645741..4646238 1 NC_008596.1 identified by match to protein family HMM PF01590; GAF domain-containing protein 4646238 4536266 MSMEG_4553 Mycobacterium smegmatis str. MC2 155 GAF domain-containing protein YP_888824.1 4645741 D 246196 CDS YP_888825.1 118473278 4535540 complement(4646256..4646960) 1 NC_008596.1 serine/threonine protein kinase 4646960 4535540 MSMEG_4554 Mycobacterium smegmatis str. MC2 155 serine/threonine protein kinase YP_888825.1 4646256 R 246196 CDS YP_888826.1 118468940 4537474 complement(4646989..4647762) 1 NC_008596.1 LppR protein 4647762 4537474 MSMEG_4555 Mycobacterium smegmatis str. MC2 155 LppR protein YP_888826.1 4646989 R 246196 CDS YP_888827.1 118468934 4537468 complement(4647861..4649756) 1 NC_008596.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 4649756 lepA 4537468 lepA Mycobacterium smegmatis str. MC2 155 GTP-binding protein LepA YP_888827.1 4647861 R 246196 CDS YP_888828.1 118469249 4531541 4649836..4650471 1 NC_008596.1 hypothetical protein 4650471 4531541 MSMEG_4558 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888828.1 4649836 D 246196 CDS YP_888829.1 118471009 4533502 complement(4650468..4651241) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 4651241 4533502 MSMEG_4557 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_888829.1 4650468 R 246196 CDS YP_888830.1 118471860 4536275 complement(4651238..4652257) 1 NC_008596.1 identified by match to protein family HMM PF00950; match to protein family HMM PF01032; ABC transporter 4652257 4536275 MSMEG_4559 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_888830.1 4651238 R 246196 CDS YP_888831.1 118470900 4537574 complement(4652260..4653279) 1 NC_008596.1 identified by match to protein family HMM PF01497; periplasmic binding protein 4653279 4537574 MSMEG_4560 Mycobacterium smegmatis str. MC2 155 periplasmic binding protein YP_888831.1 4652260 R 246196 CDS YP_888832.1 118472524 4534722 complement(4653276..4654298) 1 NC_008596.1 identified by match to protein family HMM PF01497; iron ABC transporter substrate-binding protein 4654298 4534722 MSMEG_4561 Mycobacterium smegmatis str. MC2 155 iron ABC transporter substrate-binding protein YP_888832.1 4653276 R 246196 CDS YP_888833.1 118471592 4536543 complement(4654776..4655399) 1 NC_008596.1 puromycin N-acetyltransferase 4655399 4536543 MSMEG_4563 Mycobacterium smegmatis str. MC2 155 puromycin N-acetyltransferase YP_888833.1 4654776 R 246196 CDS YP_888834.1 118474014 4530974 complement(4655467..4655898) 1 NC_008596.1 identified by match to protein family HMM PF00571; hypothetical protein 4655898 4530974 MSMEG_4564 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888834.1 4655467 R 246196 CDS YP_888835.1 118468030 4531387 4656041..4657063 1 NC_008596.1 identified by match to protein family HMM PF00248; oxidoreductase 4657063 4531387 MSMEG_4565 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_888835.1 4656041 D 246196 CDS YP_888836.1 118468499 4535480 4658741..4659601 1 NC_008596.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 4659601 4535480 MSMEG_4568 Mycobacterium smegmatis str. MC2 155 ribonuclease Z YP_888836.1 4658741 D 246196 CDS YP_888837.1 118473669 4531240 complement(4659585..4660424) 1 NC_008596.1 identified by match to protein family HMM PF01841; hypothetical protein 4660424 4531240 MSMEG_4567 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888837.1 4659585 R 246196 CDS YP_888838.1 118473551 4532421 complement(4660425..4661402) 1 NC_008596.1 identified by similarity to GP:22294891; match to protein family HMM PF04168; hypothetical protein 4661402 4532421 MSMEG_4569 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888838.1 4660425 R 246196 CDS YP_888839.1 118467439 4535448 complement(4661412..4663040) 1 NC_008596.1 identified by match to protein family HMM PF04169; match to protein family HMM PF04174; hypothetical protein 4663040 4535448 MSMEG_4570 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888839.1 4661412 R 246196 CDS YP_888840.1 118467555 4535509 4663326..4663586 1 NC_008596.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 4663586 rpsT 4535509 rpsT Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S20 YP_888840.1 4663326 D 246196 CDS YP_888841.1 118470289 4537550 complement(4663655..4664614) 1 NC_008596.1 identified by match to protein family HMM PF06144; hypothetical protein 4664614 4537550 MSMEG_4572 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888841.1 4663655 R 246196 CDS YP_888842.1 118473913 4536979 complement(4664622..4666136) 1 NC_008596.1 identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360; competence protein 4666136 4536979 MSMEG_4573 Mycobacterium smegmatis str. MC2 155 competence protein YP_888842.1 4664622 R 246196 CDS YP_888843.1 118471779 4536350 complement(4666133..4667011) 1 NC_008596.1 identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; DNA-binding protein 4667011 4536350 MSMEG_4574 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_888843.1 4666133 R 246196 CDS YP_888844.1 118468278 4535765 complement(4667078..4668343) 1 NC_008596.1 hypothetical protein 4668343 4535765 MSMEG_4575 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888844.1 4667078 R 246196 CDS YP_888845.1 118472211 4531461 complement(4668449..4669255) 1 NC_008596.1 identified by match to protein family HMM PF01145; SpfH domain-containing protein 4669255 4531461 MSMEG_4576 Mycobacterium smegmatis str. MC2 155 SpfH domain-containing protein YP_888845.1 4668449 R 246196 CDS YP_888846.1 118472441 4532058 complement(4669359..4670201) 1 NC_008596.1 identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; DegV family protein 4670201 4532058 MSMEG_4577 Mycobacterium smegmatis str. MC2 155 DegV family protein YP_888846.1 4669359 R 246196 CDS YP_888847.1 118471453 4535128 complement(4670203..4670961) 1 NC_008596.1 hypothetical protein 4670961 4535128 MSMEG_4578 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888847.1 4670203 R 246196 CDS YP_888848.1 118469471 4535734 complement(4670951..4671631) 1 NC_008596.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase 4671631 4535734 MSMEG_4579 Mycobacterium smegmatis str. MC2 155 phosphoglycerate mutase YP_888848.1 4670951 R 246196 CDS YP_888849.1 118469765 4532829 complement(4671642..4672043) 1 NC_008596.1 identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; hypothetical protein 4672043 4532829 MSMEG_4580 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888849.1 4671642 R 246196 CDS YP_888850.1 118468836 4535413 complement(4672040..4672708) 1 NC_008596.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 4672708 nadD 4535413 nadD Mycobacterium smegmatis str. MC2 155 nicotinic acid mononucleotide adenylyltransferase YP_888850.1 4672040 R 246196 CDS YP_888851.1 118471808 4536340 complement(4672767..4674224) 1 NC_008596.1 identified by match to protein family HMM PF05762; hypothetical protein 4674224 4536340 MSMEG_4582 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888851.1 4672767 R 246196 CDS YP_888852.1 118470108 4534943 complement(4674237..4675133) 1 NC_008596.1 identified by match to protein family HMM PF07728; ATPase AAA 4675133 4534943 MSMEG_4583 Mycobacterium smegmatis str. MC2 155 ATPase AAA YP_888852.1 4674237 R 246196 CDS YP_888853.1 118471691 4536453 complement(4675173..4676447) 1 NC_008596.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 4676447 proA 4536453 proA Mycobacterium smegmatis str. MC2 155 gamma-glutamyl phosphate reductase YP_888853.1 4675173 R 246196 CDS YP_888854.1 118472840 4537436 4676563..4677423 1 NC_008596.1 identified by match to protein family HMM PF00294; ribokinase 4677423 rbsK 4537436 rbsK Mycobacterium smegmatis str. MC2 155 ribokinase YP_888854.1 4676563 D 246196 CDS YP_888855.1 118470166 4534344 complement(4677428..4678480) 1 NC_008596.1 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 4678480 4534344 MSMEG_4586 Mycobacterium smegmatis str. MC2 155 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_888855.1 4677428 R 246196 CDS YP_888856.1 118472011 4533612 complement(4678486..4679235) 1 NC_008596.1 identified by match to protein family HMM PF00005; aliphatic sulfonate ABC transporter ATP-binding protein 4679235 4533612 MSMEG_4587 Mycobacterium smegmatis str. MC2 155 aliphatic sulfonate ABC transporter ATP-binding protein YP_888856.1 4678486 R 246196 CDS YP_888857.1 118472579 4534358 complement(4679222..4680112) 1 NC_008596.1 identified by match to protein family HMM PF00528; nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein 4680112 4534358 MSMEG_4588 Mycobacterium smegmatis str. MC2 155 nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein YP_888857.1 4679222 R 246196 CDS YP_888858.1 118471635 4536510 complement(4680109..4681665) 1 NC_008596.1 fused rhodanese/cystathionine beta-lyase 4681665 4536510 MSMEG_4589 Mycobacterium smegmatis str. MC2 155 fused rhodanese/cystathionine beta-lyase YP_888858.1 4680109 R 246196 CDS YP_888859.1 118469596 4531101 complement(4681779..4683116) 1 NC_008596.1 nitrilotriacetate monooxygenase component A 4683116 ssuD 4531101 ssuD Mycobacterium smegmatis str. MC2 155 nitrilotriacetate monooxygenase component A YP_888859.1 4681779 R 246196 CDS YP_888860.1 118467788 4535709 complement(4683113..4683253) 1 NC_008596.1 hypothetical protein 4683253 4535709 MSMEG_4591 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888860.1 4683113 R 246196 CDS YP_888861.1 118468630 4535028 4683272..4684516 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4684516 4535028 MSMEG_4592 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_888861.1 4683272 D 246196 CDS YP_888862.1 118473883 4536578 4684539..4685030 1 NC_008596.1 acyl-CoA dehydrogenase 4685030 4536578 MSMEG_4593 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_888862.1 4684539 D 246196 CDS YP_888863.1 118468046 4534160 4685185..4685997 1 NC_008596.1 serine/threonine protein kinase 4685997 4534160 MSMEG_4595 Mycobacterium smegmatis str. MC2 155 serine/threonine protein kinase YP_888863.1 4685185 D 246196 CDS YP_888864.1 118468597 4532376 complement(4685629..4685778) 1 NC_008596.1 hypothetical protein 4685778 4532376 MSMEG_4594 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888864.1 4685629 R 246196 CDS YP_888865.1 118473051 4533204 4686360..4687001 1 NC_008596.1 hypothetical protein 4687001 4533204 MSMEG_4596 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888865.1 4686360 D 246196 CDS YP_888866.1 118468731 4534259 complement(4687021..4687713) 1 NC_008596.1 lipoprotein lpph 4687713 lppH 4534259 lppH Mycobacterium smegmatis str. MC2 155 lipoprotein lpph YP_888866.1 4687021 R 246196 CDS YP_888867.1 118473911 4536977 complement(4687710..4688420) 1 NC_008596.1 lipoprotein lpph 4688420 lppH 4536977 lppH Mycobacterium smegmatis str. MC2 155 lipoprotein lpph YP_888867.1 4687710 R 246196 CDS YP_888868.1 118471551 4532199 complement(4688858..4689808) 1 NC_008596.1 hypothetical protein 4689808 4532199 MSMEG_4599 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888868.1 4688858 R 246196 CDS YP_888869.1 118473077 4533151 4690129..4690242 1 NC_008596.1 hypothetical protein 4690242 4533151 MSMEG_4600 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888869.1 4690129 D 246196 CDS YP_888870.1 118468164 4535036 4690236..4690391 1 NC_008596.1 hypothetical protein 4690391 4535036 MSMEG_4602 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888870.1 4690236 D 246196 CDS YP_888871.1 118471909 4536209 complement(4690381..4691154) 1 NC_008596.1 identified by match to protein family HMM PF00165; AraC family transcriptional regulator 4691154 4536209 MSMEG_4601 Mycobacterium smegmatis str. MC2 155 AraC family transcriptional regulator YP_888871.1 4690381 R 246196 CDS YP_888872.1 118468338 4532089 complement(4692127..4692264) 1 NC_008596.1 hypothetical protein 4692264 4532089 MSMEG_4604 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888872.1 4692127 R 246196 CDS YP_888873.1 118472960 4532298 complement(4692803..4693741) 1 NC_008596.1 hypothetical protein 4693741 4532298 MSMEG_4606 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888873.1 4692803 R 246196 CDS YP_888874.1 118471446 4535121 complement(4692856..4693002) 1 NC_008596.1 hypothetical protein 4693002 4535121 MSMEG_4607 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888874.1 4692856 R 246196 CDS YP_888875.1 118470528 4536120 complement(4693090..4693281) 1 NC_008596.1 hypothetical protein 4693281 4536120 MSMEG_4608 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888875.1 4693090 R 246196 CDS YP_888876.1 118467562 4535516 complement(4694274..4695215) 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 4695215 4535516 MSMEG_4609 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_888876.1 4694274 R 246196 CDS YP_888877.1 118468200 4536641 4695322..4696107 1 NC_008596.1 identified by match to protein family HMM PF01177; IgiC 4696107 4536641 MSMEG_4610 Mycobacterium smegmatis str. MC2 155 IgiC YP_888877.1 4695322 D 246196 CDS YP_888878.1 118467524 4535535 4696122..4697426 1 NC_008596.1 identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158; carrier protein 4697426 4535535 MSMEG_4611 Mycobacterium smegmatis str. MC2 155 carrier protein YP_888878.1 4696122 D 246196 CDS YP_888879.1 118470390 4533451 complement(4698006..4698167) 1 NC_008596.1 hypothetical protein 4698167 4533451 MSMEG_4613 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888879.1 4698006 R 246196 CDS YP_888880.1 118469657 4535067 complement(4698213..4698959) 1 NC_008596.1 identified by match to protein family HMM PF02518; GAF family protein 4698959 4535067 MSMEG_4614 Mycobacterium smegmatis str. MC2 155 GAF family protein YP_888880.1 4698213 R 246196 CDS YP_888881.1 118467678 4536944 complement(4700974..4703016) 1 NC_008596.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 4703016 nadE 4536944 nadE Mycobacterium smegmatis str. MC2 155 NAD synthetase YP_888881.1 4700974 R 246196 CDS YP_888882.1 118468426 4535584 4703074..4703613 1 NC_008596.1 identified by match to protein family HMM PF00857; isochorismatase 4703613 4535584 MSMEG_4618 Mycobacterium smegmatis str. MC2 155 isochorismatase YP_888882.1 4703074 D 246196 CDS YP_888883.1 118472974 4532313 4703663..4704511 1 NC_008596.1 identified by match to protein family HMM PF02146; NAD-dependent deacetylase 1 4704511 4532313 MSMEG_4620 Mycobacterium smegmatis str. MC2 155 NAD-dependent deacetylase 1 YP_888883.1 4703663 D 246196 CDS YP_888884.1 118471484 4531885 complement(4704480..4705739) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 4705739 4531885 MSMEG_4619 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_888884.1 4704480 R 246196 CDS YP_888885.1 118470419 4534192 4705806..4706447 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4706447 4534192 MSMEG_4622 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_888885.1 4705806 D 246196 CDS YP_888886.1 118469592 4531097 complement(4706444..4707556) 1 NC_008596.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 4707556 proB 4531097 proB Mycobacterium smegmatis str. MC2 155 gamma-glutamyl kinase YP_888886.1 4706444 R 246196 CDS YP_888887.1 118471780 4536351 complement(4707553..4709010) 1 NC_008596.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 4709010 obgE 4536351 obgE Mycobacterium smegmatis str. MC2 155 GTPase ObgE YP_888887.1 4707553 R 246196 CDS YP_888888.1 118471474 4531875 complement(4709102..4709368) 1 NC_008596.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 4709368 rpmA 4531875 rpmA Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L27 YP_888888.1 4709102 R 246196 CDS YP_888889.1 118473704 4533252 complement(4709385..4709696) 1 NC_008596.1 identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 4709696 rplU 4533252 rplU Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L21 YP_888889.1 4709385 R 246196 CDS YP_888890.1 118472999 4531291 complement(4709887..4713000) 1 NC_008596.1 identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757; ribonuclease, Rne/Rng family protein 4713000 4531291 MSMEG_4626 Mycobacterium smegmatis str. MC2 155 ribonuclease, Rne/Rng family protein YP_888890.1 4709887 R 246196 CDS YP_888891.1 118468451 4536899 complement(4713398..4713817) 1 NC_008596.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 4713817 ndk 4536899 ndk Mycobacterium smegmatis str. MC2 155 nucleoside diphosphate kinase YP_888891.1 4713398 R 246196 CDS YP_888892.1 118467707 4537714 complement(4713903..4714307) 1 NC_008596.1 hypothetical protein 4714307 4537714 MSMEG_4628 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888892.1 4713903 R 246196 CDS YP_888893.1 118472696 4531664 complement(4715751..4718369) 1 NC_008596.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 4718369 valS 4531664 valS Mycobacterium smegmatis str. MC2 155 valyl-tRNA synthetase YP_888893.1 4715751 R 246196 CDS YP_888894.1 118467842 4535469 complement(4718475..4719089) 1 NC_008596.1 hypothetical protein 4719089 4535469 MSMEG_4631 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888894.1 4718475 R 246196 CDS YP_888895.1 118470286 4537547 complement(4719210..4720460) 1 NC_008596.1 identified by match to protein family HMM PF03435; saccharopine dehydrogenase 4720460 4537547 MSMEG_4632 Mycobacterium smegmatis str. MC2 155 saccharopine dehydrogenase YP_888895.1 4719210 R 246196 CDS YP_888896.1 118473292 4535554 complement(4720471..4722462) 1 NC_008596.1 identified by match to protein family HMM PF00326; match to protein family HMM PF05448; peptidase S9, prolyl oligopeptidase 4722462 4535554 MSMEG_4633 Mycobacterium smegmatis str. MC2 155 peptidase S9, prolyl oligopeptidase YP_888896.1 4720471 R 246196 CDS YP_888897.1 118473668 4531239 complement(4722488..4722637) 1 NC_008596.1 hypothetical protein 4722637 4531239 MSMEG_4634 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888897.1 4722488 R 246196 CDS YP_888898.1 118473898 4536593 4722620..4723969 1 NC_008596.1 identified by match to protein family HMM PF00909; ammonium transporter 4723969 4536593 MSMEG_4635 Mycobacterium smegmatis str. MC2 155 ammonium transporter YP_888898.1 4722620 D 246196 CDS YP_888899.1 118474044 4531725 4723973..4724191 1 NC_008596.1 hypothetical protein 4724191 4531725 MSMEG_4636 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888899.1 4723973 D 246196 CDS YP_888900.1 118469172 4534279 complement(4724276..4725268) 1 NC_008596.1 hypothetical protein 4725268 4534279 MSMEG_4637 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888900.1 4724276 R 246196 CDS YP_888901.1 118471071 4537514 complement(4725265..4726206) 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; vanillate O-demethylase 4726206 4537514 MSMEG_4638 Mycobacterium smegmatis str. MC2 155 vanillate O-demethylase YP_888901.1 4725265 R 246196 CDS YP_888902.1 118472956 4532294 complement(4726203..4726733) 1 NC_008596.1 hypothetical protein 4726733 4532294 MSMEG_4639 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888902.1 4726203 R 246196 CDS YP_888903.1 118473988 4531432 4726899..4728047 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01494; salicylate hydroxylase 4728047 4531432 MSMEG_4641 Mycobacterium smegmatis str. MC2 155 salicylate hydroxylase YP_888903.1 4726899 D 246196 CDS YP_888904.1 118469017 4536068 complement(4728044..4728505) 1 NC_008596.1 identified by match to protein family HMM PF06737; hypothetical protein 4728505 4536068 MSMEG_4640 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888904.1 4728044 R 246196 CDS YP_888905.1 118470143 4531702 4728360..4728740 1 NC_008596.1 hypothetical protein 4728740 4531702 MSMEG_4642 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888905.1 4728360 D 246196 CDS YP_888906.1 118470954 4533690 complement(4728762..4729085) 1 NC_008596.1 identified by match to protein family HMM PF06737; resuscitation-promoting factor 4729085 4533690 MSMEG_4643 Mycobacterium smegmatis str. MC2 155 resuscitation-promoting factor YP_888906.1 4728762 R 246196 CDS YP_888907.1 118471164 4530954 complement(4730153..4730716) 1 NC_008596.1 MobA; links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide; involved in molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein A 4730716 4530954 MSMEG_4644 Mycobacterium smegmatis str. MC2 155 molybdopterin-guanine dinucleotide biosynthesis protein A YP_888907.1 4730153 R 246196 CDS YP_888908.1 118473076 4533150 complement(4730736..4731764) 1 NC_008596.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 4731764 orB 4533150 orB Mycobacterium smegmatis str. MC2 155 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_888908.1 4730736 R 246196 CDS YP_888909.1 118473956 4533902 complement(4731815..4733770) 1 NC_008596.1 identified by match to protein family HMM PF01855; pyruvate synthase 4733770 4533902 MSMEG_4646 Mycobacterium smegmatis str. MC2 155 pyruvate synthase YP_888909.1 4731815 R 246196 CDS YP_888910.1 118473235 4536922 complement(4734131..4734955) 1 NC_008596.1 identified by match to protein family HMM PF00294; carbohydrate kinase PfkB 4734955 4536922 MSMEG_4647 Mycobacterium smegmatis str. MC2 155 carbohydrate kinase PfkB YP_888910.1 4734131 R 246196 CDS YP_888911.1 118472675 4532940 complement(4735102..4736106) 1 NC_008596.1 DNA-binding protein 4736106 4532940 MSMEG_4648 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_888911.1 4735102 R 246196 CDS YP_888912.1 118468137 4535225 4736191..4737387 1 NC_008596.1 identified by match to protein family HMM PF05721; phytanoyl-CoA dioxygenase 4737387 4535225 MSMEG_4649 Mycobacterium smegmatis str. MC2 155 phytanoyl-CoA dioxygenase YP_888912.1 4736191 D 246196 CDS YP_888913.1 118472515 4533745 4737384..4738391 1 NC_008596.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; oxidoreductase YisS 4738391 4533745 MSMEG_4650 Mycobacterium smegmatis str. MC2 155 oxidoreductase YisS YP_888913.1 4737384 D 246196 CDS YP_888914.1 118472645 4537664 4738388..4739257 1 NC_008596.1 identified by match to protein family HMM PF01261; AP endonuclease, family protein 2 4739257 4537664 MSMEG_4651 Mycobacterium smegmatis str. MC2 155 AP endonuclease, family protein 2 YP_888914.1 4738388 D 246196 CDS YP_888915.1 118471610 4536522 4739254..4740246 1 NC_008596.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; D-oliose 4-ketoreductase 4740246 4536522 MSMEG_4652 Mycobacterium smegmatis str. MC2 155 D-oliose 4-ketoreductase YP_888915.1 4739254 D 246196 CDS YP_888916.1 118470737 4533288 4740243..4741019 1 NC_008596.1 identified by match to protein family HMM PF01261; AP endonuclease, family protein 2 superfamily protein 4741019 4533288 MSMEG_4653 Mycobacterium smegmatis str. MC2 155 AP endonuclease, family protein 2 superfamily protein YP_888916.1 4740243 D 246196 CDS YP_888917.1 118472685 4532950 complement(4741023..4742108) 1 NC_008596.1 identified by match to protein family HMM PF00248; aldo/keto reductase 4742108 4532950 MSMEG_4654 Mycobacterium smegmatis str. MC2 155 aldo/keto reductase YP_888917.1 4741023 R 246196 CDS YP_888918.1 118469221 4533275 4742250..4743161 1 NC_008596.1 identified by match to protein family HMM PF00165; match to protein family HMM PF06719; AraC family transcriptional regulator 4743161 4533275 MSMEG_4655 Mycobacterium smegmatis str. MC2 155 AraC family transcriptional regulator YP_888918.1 4742250 D 246196 CDS YP_888919.1 118468462 4537283 complement(4743236..4744054) 1 NC_008596.1 identified by match to protein family HMM PF00005; sugar ABC transporter ATP-binding protein 4744054 4537283 MSMEG_4656 Mycobacterium smegmatis str. MC2 155 sugar ABC transporter ATP-binding protein YP_888919.1 4743236 R 246196 CDS YP_888920.1 118473679 4531076 complement(4744059..4745117) 1 NC_008596.1 identified by match to protein family HMM PF02653; ABC transporter 4745117 4531076 MSMEG_4657 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_888920.1 4744059 R 246196 CDS YP_888921.1 118472391 4531801 complement(4745120..4746109) 1 NC_008596.1 identified by match to protein family HMM PF00532; sugar ABC transporter substrate-binding protein 4746109 4531801 MSMEG_4658 Mycobacterium smegmatis str. MC2 155 sugar ABC transporter substrate-binding protein YP_888921.1 4745120 R 246196 CDS YP_888922.1 118469327 4535917 complement(4746349..4747086) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07702; GntR family transcriptional regulator 4747086 4535917 MSMEG_4659 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_888922.1 4746349 R 246196 CDS YP_888923.1 118470283 4537544 4747283..4748260 1 NC_008596.1 identified by match to protein family HMM PF00294; sugar kinase 4748260 4537544 MSMEG_4661 Mycobacterium smegmatis str. MC2 155 sugar kinase YP_888923.1 4747283 D 246196 CDS YP_888924.1 118472536 4532662 complement(4748250..4749158) 1 NC_008596.1 hypothetical protein 4749158 4532662 MSMEG_4660 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888924.1 4748250 R 246196 CDS YP_888925.1 118469524 4536728 4748253..4749137 1 NC_008596.1 identified by match to protein family HMM PF01791; deoxyribose-phosphate aldolase superfamily protein 4749137 4536728 MSMEG_4662 Mycobacterium smegmatis str. MC2 155 deoxyribose-phosphate aldolase superfamily protein YP_888925.1 4748253 D 246196 CDS YP_888926.1 118470909 4537583 4749139..4750014 1 NC_008596.1 identified by match to protein family HMM PF06845; protein IolB 4750014 4537583 MSMEG_4663 Mycobacterium smegmatis str. MC2 155 protein IolB YP_888926.1 4749139 D 246196 CDS YP_888927.1 118470503 4537556 4750019..4751968 1 NC_008596.1 identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; IolD protein 4751968 4537556 MSMEG_4664 Mycobacterium smegmatis str. MC2 155 IolD protein YP_888927.1 4750019 D 246196 CDS YP_888928.1 118470045 4534589 4751978..4752898 1 NC_008596.1 identified by match to protein family HMM PF01261; IolE protein 4752898 4534589 MSMEG_4665 Mycobacterium smegmatis str. MC2 155 IolE protein YP_888928.1 4751978 D 246196 CDS YP_888929.1 118472373 4534763 4752923..4753960 1 NC_008596.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; myo-inositol 2-dehydrogenase 4753960 4534763 MSMEG_4666 Mycobacterium smegmatis str. MC2 155 myo-inositol 2-dehydrogenase YP_888929.1 4752923 D 246196 CDS YP_888930.1 118473832 4531986 complement(4753970..4754908) 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 4754908 4531986 MSMEG_4667 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_888930.1 4753970 R 246196 CDS YP_888931.1 118473746 4537351 4755030..4757345 1 NC_008596.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01701; oxidoreductase alpha (molybdopterin) subunit 4757345 4537351 MSMEG_4668 Mycobacterium smegmatis str. MC2 155 oxidoreductase alpha (molybdopterin) subunit YP_888931.1 4755030 D 246196 CDS YP_888932.1 118467552 4535506 4757345..4758169 1 NC_008596.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 4758169 fdhD 4535506 fdhD Mycobacterium smegmatis str. MC2 155 formate dehydrogenase accessory protein YP_888932.1 4757345 D 246196 CDS YP_888933.1 118471638 4536513 4758307..4759647 1 NC_008596.1 identified by match to protein family HMM PF00201; match to protein family HMM TIGR01426; N-glycosylation 4759647 4536513 MSMEG_4670 Mycobacterium smegmatis str. MC2 155 N-glycosylation YP_888933.1 4758307 D 246196 CDS YP_888934.1 118469529 4536733 complement(4759715..4760995) 1 NC_008596.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 4760995 clpX 4536733 clpX Mycobacterium smegmatis str. MC2 155 ATP-dependent protease ATP-binding subunit ClpX YP_888934.1 4759715 R 246196 CDS YP_888935.1 118473678 4531075 complement(4761452..4762108) 1 NC_008596.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 4762108 clpP 4531075 clpP Mycobacterium smegmatis str. MC2 155 ATP-dependent Clp protease proteolytic subunit YP_888935.1 4761452 R 246196 CDS YP_888936.1 118471482 4531883 complement(4762105..4762716) 1 NC_008596.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 4762716 clpP 4531883 clpP Mycobacterium smegmatis str. MC2 155 ATP-dependent Clp protease proteolytic subunit YP_888936.1 4762105 R 246196 CDS YP_888937.1 118471714 4536439 complement(4762826..4764235) 1 NC_008596.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 4764235 tig 4536439 tig Mycobacterium smegmatis str. MC2 155 trigger factor YP_888937.1 4762826 R 246196 CDS YP_888938.1 118473866 4531114 4764745..4765266 1 NC_008596.1 hypothetical protein 4765266 4531114 MSMEG_4678 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888938.1 4764745 D 246196 CDS YP_888939.1 118467434 4535443 complement(4765128..4765307) 1 NC_008596.1 hypothetical protein 4765307 4535443 MSMEG_4677 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888939.1 4765128 R 246196 CDS YP_888940.1 118468328 4532079 4765263..4765766 1 NC_008596.1 hypothetical protein 4765766 4532079 MSMEG_4679 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888940.1 4765263 D 246196 CDS YP_888941.1 118469454 4534831 4765880..4767085 1 NC_008596.1 identified by similarity to PIR:JC2091; match to protein family HMM PF00144; carboxylesterase 4767085 lipP 4534831 lipP Mycobacterium smegmatis str. MC2 155 carboxylesterase YP_888941.1 4765880 D 246196 CDS YP_888942.1 118470440 4532231 4767137..4767955 1 NC_008596.1 hypothetical protein 4767955 4532231 MSMEG_4681 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888942.1 4767137 D 246196 CDS YP_888943.1 118471410 4534886 complement(4767975..4769675) 1 NC_008596.1 identified by match to protein family HMM PF00999; Na+/H+ antiporter 4769675 4534886 MSMEG_4682 Mycobacterium smegmatis str. MC2 155 Na+/H+ antiporter YP_888943.1 4767975 R 246196 CDS YP_888944.1 118473590 4534863 complement(4769713..4770519) 1 NC_008596.1 identified by match to protein family HMM PF01149; match to protein family HMM PF06831; formamidopyrimidine-DNA glycosylase 4770519 4534863 MSMEG_4683 Mycobacterium smegmatis str. MC2 155 formamidopyrimidine-DNA glycosylase YP_888944.1 4769713 R 246196 CDS YP_888945.1 118468978 4533543 complement(4770535..4771014) 1 NC_008596.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 4771014 4533543 MSMEG_4684 Mycobacterium smegmatis str. MC2 155 ribose-5-phosphate isomerase B YP_888945.1 4770535 R 246196 CDS YP_888946.1 118472033 4534114 4771078..4772004 1 NC_008596.1 identified by match to protein family HMM PF00248; oxidoreductase YdbC 4772004 4534114 MSMEG_4686 Mycobacterium smegmatis str. MC2 155 oxidoreductase YdbC YP_888946.1 4771078 D 246196 CDS YP_888947.1 118467536 4535998 complement(4771960..4772919) 1 NC_008596.1 identified by match to protein family HMM PF03171; oxidoreductase 4772919 4535998 MSMEG_4685 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_888947.1 4771960 R 246196 CDS YP_888948.1 118468256 4533989 complement(4772916..4773356) 1 NC_008596.1 identified by match to protein family HMM PF00383; cytosine deaminase 4773356 4533989 MSMEG_4687 Mycobacterium smegmatis str. MC2 155 cytosine deaminase YP_888948.1 4772916 R 246196 CDS YP_888949.1 118469382 4532276 complement(4773420..4774028) 1 NC_008596.1 identified by match to protein family HMM PF01323; hypothetical protein 4774028 4532276 MSMEG_4688 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888949.1 4773420 R 246196 CDS YP_888950.1 118470116 4534951 4774279..4774683 1 NC_008596.1 identified by match to protein family HMM PF05305; hypothetical protein 4774683 4534951 MSMEG_4689 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888950.1 4774279 D 246196 CDS YP_888951.1 118467392 4533863 4774721..4777303 1 NC_008596.1 identified by match to protein family HMM PF01433; match to protein family HMM TIGR02412; aminopeptidase 4777303 pepN 4533863 pepN Mycobacterium smegmatis str. MC2 155 aminopeptidase YP_888951.1 4774721 D 246196 CDS YP_888952.1 118472113 4537494 4777394..4777744 1 NC_008596.1 HNH nuclease 4777744 4537494 MSMEG_4691 Mycobacterium smegmatis str. MC2 155 HNH nuclease YP_888952.1 4777394 D 246196 CDS YP_888953.1 118471166 4534952 complement(4777808..4778281) 1 NC_008596.1 hypothetical protein 4778281 4534952 MSMEG_4692 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888953.1 4777808 R 246196 CDS YP_888954.1 118470221 4533912 complement(4778268..4778507) 1 NC_008596.1 hypothetical protein 4778507 4533912 MSMEG_4693 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888954.1 4778268 R 246196 CDS YP_888955.1 118470673 4531736 complement(4778559..4779137) 1 NC_008596.1 identified by match to protein family HMM PF01844; HNH endonuclease 4779137 4531736 MSMEG_4694 Mycobacterium smegmatis str. MC2 155 HNH endonuclease YP_888955.1 4778559 R 246196 CDS YP_888956.1 118470534 4536126 4779348..4779743 1 NC_008596.1 identified by match to protein family HMM PF01152; hypothetical protein 4779743 4536126 MSMEG_4695 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888956.1 4779348 D 246196 CDS YP_888957.1 118472241 4532462 4779743..4781281 1 NC_008596.1 identified by match to protein family HMM PF00128; alpha-amylase 4781281 4532462 MSMEG_4696 Mycobacterium smegmatis str. MC2 155 alpha-amylase YP_888957.1 4779743 D 246196 CDS YP_888958.1 118473718 4536952 complement(4781282..4781938) 1 NC_008596.1 hypothetical protein 4781938 4536952 MSMEG_4697 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888958.1 4781282 R 246196 CDS YP_888959.1 118473006 4531298 complement(4781935..4782342) 1 NC_008596.1 hypothetical protein 4782342 4531298 MSMEG_4698 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888959.1 4781935 R 246196 CDS YP_888960.1 118470805 4531915 complement(4782372..4787156) 1 NC_008596.1 identified by match to protein family HMM PF05088; NAD-glutamate dehydrogenase 4787156 4531915 MSMEG_4699 Mycobacterium smegmatis str. MC2 155 NAD-glutamate dehydrogenase YP_888960.1 4782372 R 246196 CDS YP_888961.1 118467831 4534582 complement(4787325..4788998) 1 NC_008596.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 4788998 4534582 MSMEG_4700 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_888961.1 4787325 R 246196 CDS YP_888962.1 118468704 4534694 complement(4789106..4789618) 1 NC_008596.1 identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; hypothetical protein 4789618 4534694 MSMEG_4701 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888962.1 4789106 R 246196 CDS YP_888963.1 118472771 4531862 complement(4789876..4791876) 1 NC_008596.1 identified by match to protein family HMM PF05425; ABC transporter permease 4791876 4531862 MSMEG_4702 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_888963.1 4789876 R 246196 CDS YP_888964.1 118467996 4531316 complement(4791964..4794324) 1 NC_008596.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase 4794324 4531316 MSMEG_4703 Mycobacterium smegmatis str. MC2 155 glycerol-3-phosphate acyltransferase YP_888964.1 4791964 R 246196 CDS YP_888965.1 118470424 4534197 complement(4794321..4795847) 1 NC_008596.1 identified by match to protein family HMM PF01553; match to protein family HMM TIGR00530; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; acyltransferase 4795847 4534197 MSMEG_4704 Mycobacterium smegmatis str. MC2 155 acyltransferase YP_888965.1 4794321 R 246196 CDS YP_888966.1 118473034 4533187 complement(4795874..4797340) 1 NC_008596.1 identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; acyltransferase 4797340 4533187 MSMEG_4705 Mycobacterium smegmatis str. MC2 155 acyltransferase YP_888966.1 4795874 R 246196 CDS YP_888967.1 118468948 4532611 complement(4797653..4798507) 1 NC_008596.1 identified by match to protein family HMM PF00561; non-heme bromoperoxidase BPO-A2 4798507 4532611 MSMEG_4707 Mycobacterium smegmatis str. MC2 155 non-heme bromoperoxidase BPO-A2 YP_888967.1 4797653 R 246196 CDS YP_888968.1 118467757 4535657 4798800..4799402 1 NC_008596.1 identified by match to protein family HMM PF05401; methyltransferase 4799402 4535657 MSMEG_4708 Mycobacterium smegmatis str. MC2 155 methyltransferase YP_888968.1 4798800 D 246196 CDS YP_888969.1 118468101 4535599 4799413..4800162 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4800162 4535599 MSMEG_4709 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_888969.1 4799413 D 246196 CDS YP_888970.1 118470681 4531744 complement(4800165..4801385) 1 NC_008596.1 identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; branched-chain alpha-keto acid dehydrogenase subunit E2 4801385 4531744 MSMEG_4710 Mycobacterium smegmatis str. MC2 155 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_888970.1 4800165 R 246196 CDS YP_888971.1 118472225 4531476 complement(4801382..4802458) 1 NC_008596.1 identified by match to protein family HMM PF02779; match to protein family HMM PF02780; pyruvate dehydrogenase E1 component subunit beta 4802458 4531476 MSMEG_4711 Mycobacterium smegmatis str. MC2 155 pyruvate dehydrogenase E1 component subunit beta YP_888971.1 4801382 R 246196 CDS YP_888972.1 118467989 4531309 complement(4802460..4803572) 1 NC_008596.1 identified by match to protein family HMM PF00676; pyruvate dehydrogenase E1 component subunit alpha 4803572 4531309 MSMEG_4712 Mycobacterium smegmatis str. MC2 155 pyruvate dehydrogenase E1 component subunit alpha YP_888972.1 4802460 R 246196 CDS YP_888973.1 118469755 4532819 complement(4803784..4804593) 1 NC_008596.1 identified by match to protein family HMM PF03328; HpcH/HpaI aldolase/citrate lyase 4804593 4532819 MSMEG_4713 Mycobacterium smegmatis str. MC2 155 HpcH/HpaI aldolase/citrate lyase YP_888973.1 4803784 R 246196 CDS YP_888974.1 118471603 4536554 complement(4804593..4805081) 1 NC_008596.1 identified by match to protein family HMM PF01575; MoaC domain-containing protein 4805081 4536554 MSMEG_4714 Mycobacterium smegmatis str. MC2 155 MoaC domain-containing protein YP_888974.1 4804593 R 246196 CDS YP_888975.1 118469346 4533169 complement(4805090..4806253) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4806253 4533169 MSMEG_4715 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_888975.1 4805090 R 246196 CDS YP_888976.1 118468949 4532612 complement(4806250..4808259) 1 NC_008596.1 identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02785; match to protein family HMM PF02786; acetyl-/propionyl-coenzyme A carboxylase subunit alpha 4808259 4532612 MSMEG_4716 Mycobacterium smegmatis str. MC2 155 acetyl-/propionyl-coenzyme A carboxylase subunit alpha YP_888976.1 4806250 R 246196 CDS YP_888977.1 118467388 4533859 complement(4808256..4809797) 1 NC_008596.1 identified by match to protein family HMM PF01039; carboxyl transferase domain-containing protein 4809797 4533859 MSMEG_4717 Mycobacterium smegmatis str. MC2 155 carboxyl transferase domain-containing protein YP_888977.1 4808256 R 246196 CDS YP_888978.1 118472914 4533783 4809888..4810493 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4810493 4533783 MSMEG_4718 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_888978.1 4809888 D 246196 CDS YP_888979.1 118472719 4531688 complement(4810498..4812360) 1 NC_008596.1 identified by match to protein family HMM PF00326; match to protein family HMM PF02129; peptidase S9, prolyl oligopeptidase 4812360 4531688 MSMEG_4719 Mycobacterium smegmatis str. MC2 155 peptidase S9, prolyl oligopeptidase YP_888979.1 4810498 R 246196 CDS YP_888980.1 118469241 4535377 4812497..4813300 1 NC_008596.1 hypothetical protein 4813300 4535377 MSMEG_4720 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888980.1 4812497 D 246196 CDS YP_888981.1 118470358 4534633 complement(4813302..4814594) 1 NC_008596.1 identified by match to protein family HMM PF07690; permease of the major facilitator superfamily protein 4814594 4534633 MSMEG_4721 Mycobacterium smegmatis str. MC2 155 permease of the major facilitator superfamily protein YP_888981.1 4813302 R 246196 CDS YP_888982.1 118468999 4536049 4814638..4815444 1 NC_008596.1 identified by match to protein family HMM PF00106; short-chain dehydrogenase 4815444 4536049 MSMEG_4722 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase YP_888982.1 4814638 D 246196 CDS YP_888983.1 118472567 4534151 complement(4815452..4817023) 1 NC_008596.1 identified by similarity to GB:BAC71887.1; match to protein family HMM PF05872; hypothetical protein 4817023 4534151 MSMEG_4723 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888983.1 4815452 R 246196 CDS YP_888984.1 118473234 4536921 4817123..4817773 1 NC_008596.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 4817773 4536921 MSMEG_4724 Mycobacterium smegmatis str. MC2 155 oligoribonuclease YP_888984.1 4817123 D 246196 CDS YP_888985.1 118468251 4533984 4818029..4818226 1 NC_008596.1 carbamoyl-phosphate synthase small subunit 4818226 4533984 MSMEG_4726 Mycobacterium smegmatis str. MC2 155 carbamoyl-phosphate synthase small subunit YP_888985.1 4818029 D 246196 CDS YP_888986.1 118473069 4534621 4819204..4825539 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; mycocerosic acid synthase 4825539 4534621 MSMEG_4727 Mycobacterium smegmatis str. MC2 155 mycocerosic acid synthase YP_888986.1 4819204 D 246196 CDS YP_888987.1 118471167 4534953 4825597..4827039 1 NC_008596.1 identified by match to protein family HMM PF00668; condensation domain-containing protein 4827039 4534953 MSMEG_4728 Mycobacterium smegmatis str. MC2 155 condensation domain-containing protein YP_888987.1 4825597 D 246196 CDS YP_888988.1 118468774 4535665 4827036..4828424 1 NC_008596.1 hypothetical protein 4828424 4535665 MSMEG_4729 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888988.1 4827036 D 246196 CDS YP_888989.1 118467778 4535699 4828501..4829868 1 NC_008596.1 hypothetical protein 4829868 4535699 MSMEG_4730 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888989.1 4828501 D 246196 CDS YP_888990.1 118468984 4535094 4829885..4831618 1 NC_008596.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 4831618 4535094 MSMEG_4731 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_888990.1 4829885 D 246196 CDS YP_888991.1 118472616 4537266 4831644..4832453 1 NC_008596.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 4832453 4537266 MSMEG_4732 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_888991.1 4831644 D 246196 CDS YP_888992.1 118470947 4533683 complement(4832458..4833228) 1 NC_008596.1 hypothetical protein 4833228 4533683 MSMEG_4733 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888992.1 4832458 R 246196 CDS YP_888993.1 118471155 4530945 complement(4833240..4835093) 1 NC_008596.1 hypothetical protein 4835093 4530945 MSMEG_4734 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888993.1 4833240 R 246196 CDS YP_888994.1 118470228 4533919 complement(4835122..4836006) 1 NC_008596.1 hypothetical protein 4836006 4533919 MSMEG_4735 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888994.1 4835122 R 246196 CDS YP_888995.1 118470054 4534599 complement(4836134..4837150) 1 NC_008596.1 hypothetical protein 4837150 4534599 MSMEG_4736 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888995.1 4836134 R 246196 CDS YP_888996.1 118469141 4532557 complement(4837198..4838157) 1 NC_008596.1 hypothetical protein 4838157 4532557 MSMEG_4737 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888996.1 4837198 R 246196 CDS YP_888997.1 118469487 4534461 4838569..4839141 1 NC_008596.1 hypothetical protein 4839141 4534461 MSMEG_4738 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888997.1 4838569 D 246196 CDS YP_888998.1 118467644 4534992 complement(4839149..4839829) 1 NC_008596.1 hypothetical protein 4839829 4534992 MSMEG_4739 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_888998.1 4839149 R 246196 CDS YP_888999.1 118469929 4535840 complement(4839918..4841162) 1 NC_008596.1 identified by match to protein family HMM PF03033; glycosyltransferase 28 4841162 4535840 MSMEG_4740 Mycobacterium smegmatis str. MC2 155 glycosyltransferase 28 YP_888999.1 4839918 R 246196 CDS YP_889000.1 118467719 4537727 4841337..4844360 1 NC_008596.1 identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833; MmpL protein 4844360 4537727 MSMEG_4741 Mycobacterium smegmatis str. MC2 155 MmpL protein YP_889000.1 4841337 D 246196 CDS YP_889001.1 118468529 4535354 complement(4844394..4845170) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; clavaldehyde dehydrogenase 4845170 4535354 MSMEG_4742 Mycobacterium smegmatis str. MC2 155 clavaldehyde dehydrogenase YP_889001.1 4844394 R 246196 CDS YP_889002.1 118473422 4537409 4845342..4846067 1 NC_008596.1 identified by match to protein family HMM PF05988; hypothetical protein 4846067 4537409 MSMEG_4743 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889002.1 4845342 D 246196 CDS YP_889003.1 118470821 4531932 4846064..4846534 1 NC_008596.1 hypothetical protein 4846534 4531932 MSMEG_4744 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889003.1 4846064 D 246196 CDS YP_889004.1 118470112 4534947 complement(4846538..4847740) 1 NC_008596.1 identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 4847740 4534947 MSMEG_4745 Mycobacterium smegmatis str. MC2 155 ErfK/YbiS/YcfS/YnhG family protein YP_889004.1 4846538 R 246196 CDS YP_889005.1 118469587 4531092 complement(4848080..4848241) 1 NC_008596.1 hypothetical protein 4848241 4531092 MSMEG_4747 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889005.1 4848080 R 246196 CDS YP_889006.1 118472206 4530864 complement(4848238..4848381) 1 NC_008596.1 hypothetical protein 4848381 4530864 MSMEG_4748 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889006.1 4848238 R 246196 CDS YP_889007.1 118468553 4536105 complement(4848475..4848681) 1 NC_008596.1 hypothetical protein 4848681 4536105 MSMEG_4749 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889007.1 4848475 R 246196 CDS YP_889008.1 118468642 4533574 complement(4848729..4848899) 1 NC_008596.1 ornithine carbamoyltransferase 4848899 4533574 MSMEG_4750 Mycobacterium smegmatis str. MC2 155 ornithine carbamoyltransferase YP_889008.1 4848729 R 246196 CDS YP_889009.1 118468128 4535216 4849104..4849265 1 NC_008596.1 hypothetical protein 4849265 4535216 MSMEG_4751 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889009.1 4849104 D 246196 CDS YP_889010.1 118467507 4537394 complement(4849354..4849581) 1 NC_008596.1 hypothetical protein 4849581 4537394 MSMEG_4752 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889010.1 4849354 R 246196 CDS YP_889011.1 118472116 4532158 4849686..4850159 1 NC_008596.1 identified by match to protein family HMM PF00578; antioxidant, AhpC/TSA family protein 4850159 4532158 MSMEG_4753 Mycobacterium smegmatis str. MC2 155 antioxidant, AhpC/TSA family protein YP_889011.1 4849686 D 246196 CDS YP_889012.1 118468486 4537675 complement(4850171..4851178) 1 NC_008596.1 identified by match to protein family HMM PF01699; match to protein family HMM TIGR00367; K+-dependent Na+/Ca+ exchanger-like protein 4851178 4537675 MSMEG_4754 Mycobacterium smegmatis str. MC2 155 K+-dependent Na+/Ca+ exchanger-like protein YP_889012.1 4850171 R 246196 CDS YP_889013.1 118471861 4536276 complement(4851185..4852504) 1 NC_008596.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; hypothetical protein 4852504 4536276 MSMEG_4755 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889013.1 4851185 R 246196 CDS YP_889014.1 118472820 4536674 complement(4852549..4852941) 1 NC_008596.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 4852941 acpS 4536674 acpS Mycobacterium smegmatis str. MC2 155 4'-phosphopantetheinyl transferase YP_889014.1 4852549 R 246196 CDS YP_889015.1 118467920 4532653 complement(4852999..4862268) 1 NC_008596.1 identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801; fatty acid synthase 4862268 4532653 MSMEG_4757 Mycobacterium smegmatis str. MC2 155 fatty acid synthase YP_889015.1 4852999 R 246196 CDS YP_889016.1 118467593 4531409 4862285..4862494 1 NC_008596.1 hypothetical protein 4862494 4531409 MSMEG_4758 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889016.1 4862285 D 246196 CDS YP_889017.1 118469095 4535287 4862347..4862508 1 NC_008596.1 hypothetical protein 4862508 4535287 MSMEG_4759 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889017.1 4862347 D 246196 CDS YP_889018.1 118469322 4533387 4863586..4864692 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR01187; ABC transporter ATP-binding protein 4864692 4533387 MSMEG_4761 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_889018.1 4863586 D 246196 CDS YP_889019.1 118470927 4533975 4864713..4865918 1 NC_008596.1 identified by match to protein family HMM PF01547; ABC transporter 4865918 4533975 MSMEG_4762 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_889019.1 4864713 D 246196 CDS YP_889020.1 118472060 4536700 4865897..4866736 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 4866736 4536700 MSMEG_4763 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_889020.1 4865897 D 246196 CDS YP_889021.1 118473215 4531065 4866733..4867536 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 4867536 4531065 MSMEG_4764 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_889021.1 4866733 D 246196 CDS YP_889022.1 118468417 4534559 complement(4867557..4868219) 1 NC_008596.1 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 4868219 4534559 MSMEG_4765 Mycobacterium smegmatis str. MC2 155 MerR family transcriptional regulator YP_889022.1 4867557 R 246196 CDS YP_889023.1 118467360 4534045 4868495..4869766 1 NC_008596.1 identified by match to protein family HMM PF07690; major facilitator superfamily protein permease 4869766 4534045 MSMEG_4767 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein permease YP_889023.1 4868495 D 246196 CDS YP_889024.1 118472230 4532451 complement(4869751..4871082) 1 NC_008596.1 identified by match to protein family HMM PF06772; low temperature requirement protein LtrA 4871082 ltrA 4532451 ltrA Mycobacterium smegmatis str. MC2 155 low temperature requirement protein LtrA YP_889024.1 4869751 R 246196 CDS YP_889025.1 118470377 4532324 4871158..4871703 1 NC_008596.1 transcriptional regulator 4871703 4532324 MSMEG_4768 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_889025.1 4871158 D 246196 CDS YP_889026.1 118471108 4535874 4871700..4871825 1 NC_008596.1 hypothetical protein 4871825 4535874 MSMEG_4769 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889026.1 4871700 D 246196 CDS YP_889027.1 118468347 4533946 complement(4871838..4872440) 1 NC_008596.1 hypothetical protein 4872440 4533946 MSMEG_4770 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889027.1 4871838 R 246196 CDS YP_889028.1 118470502 4537554 complement(4872437..4873348) 1 NC_008596.1 hypothetical protein 4873348 4537554 MSMEG_4771 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889028.1 4872437 R 246196 CDS YP_889029.1 118473021 4532342 complement(4873491..4875002) 1 NC_008596.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 4875002 4532342 MSMEG_4772 Mycobacterium smegmatis str. MC2 155 long-chain-fatty-acid--CoA ligase YP_889029.1 4873491 R 246196 CDS YP_889030.1 118469774 4535798 complement(4874999..4876189) 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 4876189 4535798 MSMEG_4773 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_889030.1 4874999 R 246196 CDS YP_889031.1 118468585 4532712 complement(4876225..4877802) 1 NC_008596.1 identified by match to protein family HMM PF00501; AMP-dependent synthetase/ligase 4877802 4532712 MSMEG_4774 Mycobacterium smegmatis str. MC2 155 AMP-dependent synthetase/ligase YP_889031.1 4876225 R 246196 CDS YP_889032.1 118469403 4531955 4877847..4878575 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 4878575 4531955 MSMEG_4775 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase/isomerase YP_889032.1 4877847 D 246196 CDS YP_889033.1 118468113 4535611 complement(4878596..4879120) 1 NC_008596.1 glyoxalase/bleomycin resistance protein/dioxygenase 4879120 4535611 MSMEG_4776 Mycobacterium smegmatis str. MC2 155 glyoxalase/bleomycin resistance protein/dioxygenase YP_889033.1 4878596 R 246196 CDS YP_889034.1 118473081 4533156 4879224..4879655 1 NC_008596.1 identified by match to protein family HMM PF01796; hypothetical protein 4879655 4533156 MSMEG_4777 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889034.1 4879224 D 246196 CDS YP_889035.1 118470181 4530816 4879668..4880813 1 NC_008596.1 identified by match to protein family HMM PF02803; thiolase 4880813 4530816 MSMEG_4778 Mycobacterium smegmatis str. MC2 155 thiolase YP_889035.1 4879668 D 246196 CDS YP_889036.1 118471425 4532808 complement(4880896..4881501) 1 NC_008596.1 identified by match to protein family HMM PF00440; regulatory protein 4881501 4532808 MSMEG_4779 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_889036.1 4880896 R 246196 CDS YP_889037.1 118470553 4533007 4881695..4883008 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome p450 4883008 4533007 MSMEG_4780 Mycobacterium smegmatis str. MC2 155 cytochrome p450 YP_889037.1 4881695 D 246196 CDS YP_889038.1 118467462 4536607 4883097..4883573 1 NC_008596.1 hypothetical protein 4883573 4536607 MSMEG_4781 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889038.1 4883097 D 246196 CDS YP_889039.1 118468286 4535773 4883577..4883996 1 NC_008596.1 hypothetical protein 4883996 4535773 MSMEG_4782 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889039.1 4883577 D 246196 CDS YP_889040.1 118472699 4531667 complement(4884016..4884396) 1 NC_008596.1 hypothetical protein 4884396 4531667 MSMEG_4783 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889040.1 4884016 R 246196 CDS YP_889041.1 118472272 4534798 4884580..4885089 1 NC_008596.1 hypothetical protein 4885089 4534798 MSMEG_4784 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889041.1 4884580 D 246196 CDS YP_889042.1 118471359 4535266 complement(4885100..4886830) 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; mce-family protein mce1f 4886830 4535266 MSMEG_4785 Mycobacterium smegmatis str. MC2 155 mce-family protein mce1f YP_889042.1 4885100 R 246196 CDS YP_889043.1 118470959 4534531 complement(4886830..4888230) 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor mce family protein 4888230 4534531 MSMEG_4786 Mycobacterium smegmatis str. MC2 155 virulence factor mce family protein YP_889043.1 4886830 R 246196 CDS YP_889044.1 118468785 4535676 complement(4888227..4889687) 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor mce family protein 4889687 4535676 MSMEG_4787 Mycobacterium smegmatis str. MC2 155 virulence factor mce family protein YP_889044.1 4888227 R 246196 CDS YP_889045.1 118467763 4533394 complement(4890232..4890726) 1 NC_008596.1 hypothetical protein 4890726 4533394 MSMEG_4789 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889045.1 4890232 R 246196 CDS YP_889046.1 118470630 4532988 4890445..4891767 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 4891767 4532988 MSMEG_4790 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_889046.1 4890445 D 246196 CDS YP_889047.1 118471666 4536465 complement(4891775..4892476) 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 4892476 4536465 MSMEG_4791 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_889047.1 4891775 R 246196 CDS YP_889048.1 118470731 4533282 complement(4892576..4893052) 1 NC_008596.1 identified by match to protein family HMM PF02470; virulence factor mce family protein 4893052 4533282 MSMEG_4792 Mycobacterium smegmatis str. MC2 155 virulence factor mce family protein YP_889048.1 4892576 R 246196 CDS YP_889049.1 118473503 4532136 complement(4893037..4894062) 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 4894062 4532136 MSMEG_4793 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_889049.1 4893037 R 246196 CDS YP_889050.1 118472804 4536658 complement(4894059..4895333) 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor 4895333 4536658 MSMEG_4794 Mycobacterium smegmatis str. MC2 155 virulence factor YP_889050.1 4894059 R 246196 CDS YP_889051.1 118469369 4535883 complement(4895343..4896191) 1 NC_008596.1 identified by match to protein family HMM PF02405; ABC transporter 4896191 4535883 MSMEG_4795 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_889051.1 4895343 R 246196 CDS YP_889052.1 118470268 4537160 complement(4896209..4896982) 1 NC_008596.1 identified by match to protein family HMM PF02405; hypothetical protein 4896982 4537160 MSMEG_4796 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889052.1 4896209 R 246196 CDS YP_889053.1 118470019 4532758 complement(4896996..4897121) 1 NC_008596.1 hypothetical protein 4897121 4532758 MSMEG_4797 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889053.1 4896996 R 246196 CDS YP_889054.1 118472082 4537091 complement(4897386..4898594) 1 NC_008596.1 identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F 4898594 4537091 MSMEG_4798 Mycobacterium smegmatis str. MC2 155 L-carnitine dehydratase/bile acid-inducible protein F YP_889054.1 4897386 R 246196 CDS YP_889055.1 118471735 4536382 complement(4898623..4900095) 1 NC_008596.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 4900095 4536382 MSMEG_4799 Mycobacterium smegmatis str. MC2 155 aldehyde dehydrogenase YP_889055.1 4898623 R 246196 CDS YP_889056.1 118470940 4533675 4900364..4901065 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; 3-oxoacyl-ACP reductase 4901065 4533675 MSMEG_4800 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_889056.1 4900364 D 246196 CDS YP_889057.1 118473186 4533303 4901113..4901985 1 NC_008596.1 identified by match to protein family HMM PF00106; carveol dehydrogenase 4901985 4533303 MSMEG_4801 Mycobacterium smegmatis str. MC2 155 carveol dehydrogenase YP_889057.1 4901113 D 246196 CDS YP_889058.1 118469585 4531459 4902029..4902220 1 NC_008596.1 hypothetical protein 4902220 4531459 MSMEG_4802 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889058.1 4902029 D 246196 CDS YP_889059.1 118468105 4535603 4902298..4903659 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 4903659 4535603 MSMEG_4803 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_889059.1 4902298 D 246196 CDS YP_889060.1 118473331 4530990 4903779..4904126 1 NC_008596.1 hypothetical protein 4904126 4530990 MSMEG_4804 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889060.1 4903779 D 246196 CDS YP_889061.1 118471949 4536173 complement(4904142..4905317) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 4905317 4536173 MSMEG_4805 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_889061.1 4904142 R 246196 CDS YP_889062.1 118470011 4532749 complement(4905320..4906324) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4906324 4532749 MSMEG_4806 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_889062.1 4905320 R 246196 CDS YP_889063.1 118470521 4536113 4906661..4907713 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 4907713 4536113 MSMEG_4807 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_889063.1 4906661 D 246196 CDS YP_889064.1 118471567 4532215 4907782..4908876 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 4908876 4532215 MSMEG_4808 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_889064.1 4907782 D 246196 CDS YP_889065.1 118469166 4534752 4908876..4909268 1 NC_008596.1 identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein 4909268 4534752 MSMEG_4809 Mycobacterium smegmatis str. MC2 155 Rieske (2Fe-2S) domain-containing protein YP_889065.1 4908876 D 246196 CDS YP_889066.1 118472133 4532470 4909265..4910176 1 NC_008596.1 hypothetical protein 4910176 4532470 MSMEG_4810 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889066.1 4909265 D 246196 CDS YP_889067.1 118467698 4537336 complement(4910179..4910643) 1 NC_008596.1 hypothetical protein 4910643 4537336 MSMEG_4811 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889067.1 4910179 R 246196 CDS YP_889068.1 118469883 4536575 4910683..4911978 1 NC_008596.1 identified by match to protein family HMM PF01512; respiratory-chain NADH dehydrogenase domain-containing protein 4911978 4536575 MSMEG_4812 Mycobacterium smegmatis str. MC2 155 respiratory-chain NADH dehydrogenase domain-containing protein YP_889068.1 4910683 D 246196 CDS YP_889069.1 118469184 4534291 4911975..4912205 1 NC_008596.1 hypothetical protein 4912205 4534291 MSMEG_4813 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889069.1 4911975 D 246196 CDS YP_889070.1 118472661 4535081 4912253..4913908 1 NC_008596.1 identified by match to protein family HMM PF01796; hypothetical protein 4913908 4535081 MSMEG_4814 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889070.1 4912253 D 246196 CDS YP_889071.1 118471348 4533232 4913911..4914807 1 NC_008596.1 hypothetical protein 4914807 4533232 MSMEG_4815 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889071.1 4913911 D 246196 CDS YP_889072.1 118470062 4535955 4914807..4915625 1 NC_008596.1 identified by match to protein family HMM PF03446; match to protein family HMM PF03807; 6-phosphogluconate dehydrogenase 4915625 4535955 MSMEG_4816 Mycobacterium smegmatis str. MC2 155 6-phosphogluconate dehydrogenase YP_889072.1 4914807 D 246196 CDS YP_889073.1 118469119 4535332 4915625..4916416 1 NC_008596.1 identified by match to protein family HMM PF03446; match to protein family HMM PF03807; 6-phosphogluconate dehydrogenase 4916416 4535332 MSMEG_4817 Mycobacterium smegmatis str. MC2 155 6-phosphogluconate dehydrogenase YP_889073.1 4915625 D 246196 CDS YP_889074.1 118471247 4531523 4916557..4917759 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 4917759 4531523 MSMEG_4818 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_889074.1 4916557 D 246196 CDS YP_889075.1 118473592 4534865 4917759..4917959 1 NC_008596.1 hypothetical protein 4917959 4534865 MSMEG_4819 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889075.1 4917759 D 246196 CDS YP_889076.1 118471817 4536310 complement(4917967..4918878) 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 4918878 4536310 MSMEG_4820 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889076.1 4917967 R 246196 CDS YP_889077.1 118469513 4536716 complement(4918894..4919184) 1 NC_008596.1 identified by match to protein family HMM PF07045; hypothetical protein 4919184 4536716 MSMEG_4821 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889077.1 4918894 R 246196 CDS YP_889078.1 118468913 4537075 complement(4919227..4919415) 1 NC_008596.1 hypothetical protein 4919415 4537075 MSMEG_4822 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889078.1 4919227 R 246196 CDS YP_889079.1 118473265 4537695 complement(4919412..4920698) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome p450 4920698 4537695 MSMEG_4823 Mycobacterium smegmatis str. MC2 155 cytochrome p450 YP_889079.1 4919412 R 246196 CDS YP_889080.1 118473978 4531422 4920923..4921702 1 NC_008596.1 hypothetical protein 4921702 4531422 MSMEG_4824 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889080.1 4920923 D 246196 CDS YP_889081.1 118472165 4535691 4921789..4922448 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4922448 4535691 MSMEG_4825 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889081.1 4921789 D 246196 CDS YP_889082.1 118467452 4536597 4922448..4923749 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4923749 4536597 MSMEG_4826 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_889082.1 4922448 D 246196 CDS YP_889083.1 118474035 4531715 4923746..4924777 1 NC_008596.1 identified by match to protein family HMM PF01636; aminoglycoside phosphotransferase 4924777 4531715 MSMEG_4827 Mycobacterium smegmatis str. MC2 155 aminoglycoside phosphotransferase YP_889083.1 4923746 D 246196 CDS YP_889084.1 118470890 4537195 4924779..4925753 1 NC_008596.1 identified by match to protein family HMM PF00107; alcohol dehydrogenase 4925753 4537195 MSMEG_4828 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_889084.1 4924779 D 246196 CDS YP_889085.1 118471421 4532804 4925880..4927070 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 4927070 4532804 MSMEG_4829 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_889085.1 4925880 D 246196 CDS YP_889086.1 118469796 4535936 complement(4927084..4927587) 1 NC_008596.1 hypothetical protein 4927587 4535936 MSMEG_4830 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889086.1 4927084 R 246196 CDS YP_889087.1 118473467 4531169 complement(4927584..4928201) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4928201 4531169 MSMEG_4831 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889087.1 4927584 R 246196 CDS YP_889088.1 118468931 4537465 complement(4928318..4929466) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4929466 4537465 MSMEG_4832 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_889088.1 4928318 R 246196 CDS YP_889089.1 118470560 4531503 complement(4929479..4930627) 1 NC_008596.1 identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; acyl-CoA dehydrogenase 4930627 4531503 MSMEG_4833 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_889089.1 4929479 R 246196 CDS YP_889090.1 118473998 4530958 complement(4930620..4931879) 1 NC_008596.1 identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F 4931879 4530958 MSMEG_4834 Mycobacterium smegmatis str. MC2 155 L-carnitine dehydratase/bile acid-inducible protein F YP_889090.1 4930620 R 246196 CDS YP_889091.1 118472519 4534717 complement(4931885..4932643) 1 NC_008596.1 identified by match to protein family HMM PF00106; 3-oxoacyl-ACP reductase 4932643 4534717 MSMEG_4835 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_889091.1 4931885 R 246196 CDS YP_889092.1 118471836 4536290 complement(4932660..4933868) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; FadE121 protein 4933868 4536290 MSMEG_4836 Mycobacterium smegmatis str. MC2 155 FadE121 protein YP_889092.1 4932660 R 246196 CDS YP_889093.1 118471057 4537130 complement(4933892..4935187) 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 4935187 4537130 MSMEG_4837 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_889093.1 4933892 R 246196 CDS YP_889094.1 118472514 4533744 4935302..4935427 1 NC_008596.1 hypothetical protein 4935427 4533744 MSMEG_4838 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889094.1 4935302 D 246196 CDS YP_889095.1 118473603 4531038 4935469..4935999 1 NC_008596.1 identified by match to protein family HMM PF02627; carboxymuconolactone decarboxylase 4935999 4531038 MSMEG_4839 Mycobacterium smegmatis str. MC2 155 carboxymuconolactone decarboxylase YP_889095.1 4935469 D 246196 CDS YP_889096.1 118467345 4534704 4936035..4937378 1 NC_008596.1 identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein 4937378 4534704 MSMEG_4840 Mycobacterium smegmatis str. MC2 155 Rieske (2Fe-2S) domain-containing protein YP_889096.1 4936035 D 246196 CDS YP_889097.1 118470439 4532230 4937371..4937718 1 NC_008596.1 hypothetical protein 4937718 4532230 MSMEG_4841 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889097.1 4937371 D 246196 CDS YP_889098.1 118474050 4531731 4937721..4938941 1 NC_008596.1 identified by match to protein family HMM PF01979; match to protein family HMM PF07969; amidohydrolase 4938941 4531731 MSMEG_4842 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_889098.1 4937721 D 246196 CDS YP_889099.1 118468577 4532704 4938925..4939368 1 NC_008596.1 hypothetical protein 4939368 4532704 MSMEG_4843 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889099.1 4938925 D 246196 CDS YP_889100.1 118473857 4533557 4939369..4940490 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 4940490 4533557 MSMEG_4844 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_889100.1 4939369 D 246196 CDS YP_889101.1 118468085 4536013 4940496..4941302 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4941302 4536013 MSMEG_4845 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_889101.1 4940496 D 246196 CDS YP_889102.1 118469324 4535913 complement(4941334..4942116) 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4942116 4535913 MSMEG_4846 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_889102.1 4941334 R 246196 CDS YP_889103.1 118468363 4533962 4942335..4942997 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4942997 4533962 MSMEG_4847 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889103.1 4942335 D 246196 CDS YP_889104.1 118473043 4533196 4943034..4943165 1 NC_008596.1 hypothetical protein 4943165 4533196 MSMEG_4848 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889104.1 4943034 D 246196 CDS YP_889105.1 118467352 4534711 4943348..4944193 1 NC_008596.1 identified by match to protein family HMM PF00106; carveol dehydrogenase 4944193 4534711 MSMEG_4849 Mycobacterium smegmatis str. MC2 155 carveol dehydrogenase YP_889105.1 4943348 D 246196 CDS YP_889106.1 118473837 4531991 complement(4944203..4945003) 1 NC_008596.1 identified by match to protein family HMM PF00106; short-chain dehydrogenase/reductase SDR 4945003 4531991 MSMEG_4850 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase SDR YP_889106.1 4944203 R 246196 CDS YP_889107.1 118473510 4533872 complement(4945030..4947447) 1 NC_008596.1 identified by match to protein family HMM PF02515; caib/baif family protein 4947447 4533872 MSMEG_4851 Mycobacterium smegmatis str. MC2 155 caib/baif family protein YP_889107.1 4945030 R 246196 CDS YP_889108.1 118472193 4530851 complement(4947453..4948409) 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase 4948409 4530851 MSMEG_4852 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_889108.1 4947453 R 246196 CDS YP_889109.1 118469859 4530897 complement(4948402..4949535) 1 NC_008596.1 identified by match to protein family HMM PF00557; peptidase, M24 family protein 4949535 4530897 MSMEG_4853 Mycobacterium smegmatis str. MC2 155 peptidase, M24 family protein YP_889109.1 4948402 R 246196 CDS YP_889110.1 118468581 4532708 complement(4949525..4950802) 1 NC_008596.1 identified by match to protein family HMM PF00557; peptidase, M24 family protein 4950802 4532708 MSMEG_4854 Mycobacterium smegmatis str. MC2 155 peptidase, M24 family protein YP_889110.1 4949525 R 246196 CDS YP_889111.1 118469381 4532275 complement(4950799..4951971) 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 4951971 4532275 MSMEG_4855 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_889111.1 4950799 R 246196 CDS YP_889112.1 118470137 4531696 complement(4952011..4953243) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 4953243 4531696 MSMEG_4856 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_889112.1 4952011 R 246196 CDS YP_889113.1 118469978 4535752 complement(4953276..4953470) 1 NC_008596.1 hypothetical protein 4953470 4535752 MSMEG_4857 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889113.1 4953276 R 246196 CDS YP_889114.1 118472511 4533741 complement(4953474..4954178) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 4954178 4533741 MSMEG_4858 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889114.1 4953474 R 246196 CDS YP_889115.1 118469866 4530904 complement(4954289..4955095) 1 NC_008596.1 identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 4955095 4530904 MSMEG_4859 Mycobacterium smegmatis str. MC2 155 oxidoreductase, short chain dehydrogenase/reductase YP_889115.1 4954289 R 246196 CDS YP_889116.1 118473803 4531282 complement(4955092..4955922) 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 4955922 4531282 MSMEG_4860 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_889116.1 4955092 R 246196 CDS YP_889117.1 118471816 4536309 complement(4955940..4956926) 1 NC_008596.1 identified by match to protein family HMM PF04199; cyclase 4956926 4536309 MSMEG_4861 Mycobacterium smegmatis str. MC2 155 cyclase YP_889117.1 4955940 R 246196 CDS YP_889118.1 118472593 4536871 complement(4956939..4957775) 1 NC_008596.1 catalyzes the formation of 5-alpha-androstane-3,17-dione from androsterone; Acts on other 3-alpha-hydroxysteroids and on 9-, 11- and 15-hydroxyprostaglandin.; 3-alpha-hydroxysteroid dehydrogenase 4957775 4536871 MSMEG_4862 Mycobacterium smegmatis str. MC2 155 3-alpha-hydroxysteroid dehydrogenase YP_889118.1 4956939 R 246196 CDS YP_889119.1 118468143 4532686 complement(4957779..4959089) 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 4959089 4532686 MSMEG_4863 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889119.1 4957779 R 246196 CDS YP_889120.1 118468654 4535230 complement(4959104..4960867) 1 NC_008596.1 initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; 3-ketosteroid-delta-1-dehydrogenase 4960867 4535230 MSMEG_4864 Mycobacterium smegmatis str. MC2 155 3-ketosteroid-delta-1-dehydrogenase YP_889120.1 4959104 R 246196 CDS YP_889121.1 118469608 4531580 complement(4960864..4961784) 1 NC_008596.1 catalyzes the cleavage of 3-(2,3-dihydroxyphenyl) propionate into 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate; part of the 3-phenylpropionic acid degradation pathway; member of the protocatechuate 4,5-dioxygenase family; 3-(2,3-dihydroxyphenyl)propionate dioxygenase 4961784 mhpB 4531580 mhpB Mycobacterium smegmatis str. MC2 155 3-(2,3-dihydroxyphenyl)propionate dioxygenase YP_889121.1 4960864 R 246196 CDS YP_889122.1 118469966 4535740 complement(4961732..4963423) 1 NC_008596.1 catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate; 3-(3-hydroxyphenyl)propionate hydroxylase 4963423 mhpA 4535740 mhpA Mycobacterium smegmatis str. MC2 155 3-(3-hydroxyphenyl)propionate hydroxylase YP_889122.1 4961732 R 246196 CDS YP_889123.1 118472366 4534756 complement(4963428..4964336) 1 NC_008596.1 identified by match to protein family HMM PF00561; 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase 4964336 4534756 MSMEG_4867 Mycobacterium smegmatis str. MC2 155 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase YP_889123.1 4963428 R 246196 CDS YP_889124.1 118472458 4533599 4964467..4965192 1 NC_008596.1 identified by match to protein family HMM PF01614; transcriptional regulator 4965192 4533599 MSMEG_4868 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_889124.1 4964467 D 246196 CDS YP_889125.1 118471744 4536391 4965207..4966847 1 NC_008596.1 identified by match to protein family HMM PF00890; match to protein family HMM PF01266; FAD binding domain-containing protein 4966847 4536391 MSMEG_4870 Mycobacterium smegmatis str. MC2 155 FAD binding domain-containing protein YP_889125.1 4965207 D 246196 CDS YP_889126.1 118472207 4530865 complement(4966836..4967720) 1 NC_008596.1 identified by match to protein family HMM PF03308; match to protein family HMM TIGR00750; LAO/AO transporter ATPase 4967720 4530865 MSMEG_4869 Mycobacterium smegmatis str. MC2 155 LAO/AO transporter ATPase YP_889126.1 4966836 R 246196 CDS YP_889127.1 118469851 4530889 4967796..4968560 1 NC_008596.1 identified by match to protein family HMM PF00106; 3-hydroxyacyl-CoA dehydrogenase 4968560 4530889 MSMEG_4871 Mycobacterium smegmatis str. MC2 155 3-hydroxyacyl-CoA dehydrogenase YP_889127.1 4967796 D 246196 CDS YP_889128.1 118467653 4535001 4968654..4969424 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 4969424 4535001 MSMEG_4872 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_889128.1 4968654 D 246196 CDS YP_889129.1 118472962 4532300 complement(4969432..4970190) 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 4970190 4532300 MSMEG_4873 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase/isomerase YP_889129.1 4969432 R 246196 CDS YP_889130.1 118472274 4534800 complement(4970204..4971292) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; acyl-CoA dehydrogenase 4971292 4534800 MSMEG_4874 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_889130.1 4970204 R 246196 CDS YP_889131.1 118472287 4534813 complement(4971279..4972109) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase 4972109 4534813 MSMEG_4875 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_889131.1 4971279 R 246196 CDS YP_889132.1 118467450 4535459 complement(4972087..4973466) 1 NC_008596.1 identified by match to protein family HMM PF00501; acyl-CoA synthetase 4973466 4535459 MSMEG_4876 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_889132.1 4972087 R 246196 CDS YP_889133.1 118468204 4536646 4973495..4973908 1 NC_008596.1 identified by match to protein family HMM PF00111; 2Fe-2S iron-sulfur cluster binding domain-containing protein 4973908 4536646 MSMEG_4878 Mycobacterium smegmatis str. MC2 155 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_889133.1 4973495 D 246196 CDS YP_889134.1 118470167 4534345 complement(4973893..4974972) 1 NC_008596.1 identified by match to protein family HMM PF02515; CaiB/BaiF family protein 4974972 4534345 MSMEG_4877 Mycobacterium smegmatis str. MC2 155 CaiB/BaiF family protein YP_889134.1 4973893 R 246196 CDS YP_889135.1 118473823 4531633 complement(4974969..4975925) 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 4975925 4531633 MSMEG_4879 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889135.1 4974969 R 246196 CDS YP_889136.1 118468879 4533764 complement(4975922..4976320) 1 NC_008596.1 identified by match to protein family HMM PF02310; match to protein family HMM TIGR00640; methylmalonyl-CoA mutase C-terminal domain-containing protein 4976320 4533764 MSMEG_4880 Mycobacterium smegmatis str. MC2 155 methylmalonyl-CoA mutase C-terminal domain-containing protein YP_889136.1 4975922 R 246196 CDS YP_889137.1 118474026 4533439 complement(4976416..4978005) 1 NC_008596.1 identified by match to protein family HMM PF01642; match to protein family HMM TIGR00641; methylmalonyl-CoA mutase, N-terminus of large subunit 4978005 4533439 MSMEG_4881 Mycobacterium smegmatis str. MC2 155 methylmalonyl-CoA mutase, N-terminus of large subunit YP_889137.1 4976416 R 246196 CDS YP_889138.1 118470713 4533928 4978264..4979124 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 4979124 4533928 MSMEG_4882 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_889138.1 4978264 D 246196 CDS YP_889139.1 118468470 4537291 4979121..4980611 1 NC_008596.1 identified by match to protein family HMM PF00501; AMP-dependent synthetase/ligase 4980611 4537291 MSMEG_4883 Mycobacterium smegmatis str. MC2 155 AMP-dependent synthetase/ligase YP_889139.1 4979121 D 246196 CDS YP_889140.1 118470174 4534352 4980630..4980932 1 NC_008596.1 hypothetical protein 4980932 4534352 MSMEG_4884 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889140.1 4980630 D 246196 CDS YP_889141.1 118472334 4534225 4980943..4982244 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family protein transporter 4982244 4534225 MSMEG_4886 Mycobacterium smegmatis str. MC2 155 major facilitator family protein transporter YP_889141.1 4980943 D 246196 CDS YP_889142.1 118471387 4534981 complement(4982241..4983317) 1 NC_008596.1 hypothetical protein 4983317 4534981 MSMEG_4885 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889142.1 4982241 R 246196 CDS YP_889143.1 118473063 4534615 complement(4983314..4984516) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 4984516 4534615 MSMEG_4887 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_889143.1 4983314 R 246196 CDS YP_889144.1 118470284 4537545 complement(4984613..4985614) 1 NC_008596.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; ligand-binding /sugar binding domain-containing protein 4985614 4537545 MSMEG_4888 Mycobacterium smegmatis str. MC2 155 ligand-binding /sugar binding domain-containing protein YP_889144.1 4984613 R 246196 CDS YP_889145.1 118468377 4532926 complement(4985611..4986933) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; integral membrane transporter 4986933 4532926 MSMEG_4889 Mycobacterium smegmatis str. MC2 155 integral membrane transporter YP_889145.1 4985611 R 246196 CDS YP_889146.1 118472169 4535695 complement(4987073..4987606) 1 NC_008596.1 identified by match to protein family HMM PF02627; match to protein family HMM TIGR00777; match to protein family HMM TIGR00778; alkylhydroperoxidase 4987606 ahpD 4535695 ahpD Mycobacterium smegmatis str. MC2 155 alkylhydroperoxidase YP_889146.1 4987073 R 246196 CDS YP_889147.1 118471486 4531887 complement(4987610..4988197) 1 NC_008596.1 identified by match to protein family HMM PF00578; alkylhydroperoxidase 4988197 4531887 MSMEG_4891 Mycobacterium smegmatis str. MC2 155 alkylhydroperoxidase YP_889147.1 4987610 R 246196 CDS YP_889148.1 118469610 4531582 complement(4988175..4988669) 1 NC_008596.1 hypothetical protein 4988669 4531582 MSMEG_4892 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889148.1 4988175 R 246196 CDS YP_889149.1 118467616 4533078 4988811..4990256 1 NC_008596.1 neutral zinc metallopeptidase 4990256 4533078 MSMEG_4893 Mycobacterium smegmatis str. MC2 155 neutral zinc metallopeptidase YP_889149.1 4988811 D 246196 CDS YP_889150.1 118469274 4532244 4990300..4990884 1 NC_008596.1 hypothetical protein 4990884 4532244 MSMEG_4894 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889150.1 4990300 D 246196 CDS YP_889151.1 118468694 4534684 complement(4990906..4991022) 1 NC_008596.1 hypothetical protein 4991022 4534684 MSMEG_4895 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889151.1 4990906 R 246196 CDS YP_889152.1 118467833 4534584 4990987..4992840 1 NC_008596.1 activates fatty acids by binding to coenzyme A; fatty-acid--CoA ligase 4992840 4534584 MSMEG_4896 Mycobacterium smegmatis str. MC2 155 fatty-acid--CoA ligase YP_889152.1 4990987 D 246196 CDS YP_889153.1 118470214 4533905 4993024..4993398 1 NC_008596.1 hypothetical protein 4993398 4533905 MSMEG_4898 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889153.1 4993024 D 246196 CDS YP_889154.1 118470375 4532322 4993399..4993743 1 NC_008596.1 Pks14 protein 4993743 4532322 MSMEG_4900 Mycobacterium smegmatis str. MC2 155 Pks14 protein YP_889154.1 4993399 D 246196 CDS YP_889155.1 118471874 4536250 complement(4993740..4994342) 1 NC_008596.1 identified by match to protein family HMM PF01725; match to protein family HMM TIGR00042; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family protein 4994342 rdgB 4536250 rdgB Mycobacterium smegmatis str. MC2 155 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family protein YP_889155.1 4993740 R 246196 CDS YP_889156.1 118467865 4532887 complement(4994349..4995128) 1 NC_008596.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 4995128 rph 4532887 rph Mycobacterium smegmatis str. MC2 155 ribonuclease PH YP_889156.1 4994349 R 246196 CDS YP_889157.1 118469822 4532848 complement(4995163..4995921) 1 NC_008596.1 metal-dependent hydrolase of the beta-lactamase superfamily protein III 4995921 4532848 MSMEG_4902 Mycobacterium smegmatis str. MC2 155 metal-dependent hydrolase of the beta-lactamase superfamily protein III YP_889157.1 4995163 R 246196 CDS YP_889158.1 118470579 4531366 complement(4995984..4996817) 1 NC_008596.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 4996817 murI 4531366 murI Mycobacterium smegmatis str. MC2 155 glutamate racemase YP_889158.1 4995984 R 246196 CDS YP_889159.1 118471996 4536143 complement(4996814..4997473) 1 NC_008596.1 identified by match to protein family HMM PF01694; rhomboid family protein 4997473 4536143 MSMEG_4904 Mycobacterium smegmatis str. MC2 155 rhomboid family protein YP_889159.1 4996814 R 246196 CDS YP_889160.1 118467891 4531247 complement(4997511..4998482) 1 NC_008596.1 identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; cysteine synthase B 4998482 cysM 4531247 cysM Mycobacterium smegmatis str. MC2 155 cysteine synthase B YP_889160.1 4997511 R 246196 CDS YP_889161.1 118472321 4532909 complement(4998490..4998771) 1 NC_008596.1 identified by match to protein family HMM PF02597; ThiS family protein 4998771 4532909 MSMEG_4906 Mycobacterium smegmatis str. MC2 155 ThiS family protein YP_889161.1 4998490 R 246196 CDS YP_889162.1 118471334 4534847 complement(4998781..4999197) 1 NC_008596.1 identified by match to protein family HMM PF01398; Mov34/MPN/PAD-1 family protein 4999197 4534847 MSMEG_4907 Mycobacterium smegmatis str. MC2 155 Mov34/MPN/PAD-1 family protein YP_889162.1 4998781 R 246196 CDS YP_889163.1 118472847 4537443 complement(4999233..5000252) 1 NC_008596.1 identified by match to protein family HMM PF03576; endo-type 6-aminohexanoate oligomer hydrolase 5000252 4537443 MSMEG_4908 Mycobacterium smegmatis str. MC2 155 endo-type 6-aminohexanoate oligomer hydrolase YP_889163.1 4999233 R 246196 CDS YP_889164.1 118473307 4535179 complement(5000259..5000837) 1 NC_008596.1 hypothetical protein 5000837 4535179 MSMEG_4909 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889164.1 5000259 R 246196 CDS YP_889165.1 118472588 4534369 complement(5000844..5001146) 1 NC_008596.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 5001146 clpS 4534369 clpS Mycobacterium smegmatis str. MC2 155 ATP-dependent Clp protease adaptor protein ClpS YP_889165.1 5000844 R 246196 CDS YP_889166.1 118467857 4532879 5001213..5002517 1 NC_008596.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 5002517 pncB 4532879 pncB Mycobacterium smegmatis str. MC2 155 nicotinate phosphoribosyltransferase YP_889166.1 5001213 D 246196 CDS YP_889167.1 118469948 4530911 5002521..5004572 1 NC_008596.1 helicase 5004572 4530911 MSMEG_4912 Mycobacterium smegmatis str. MC2 155 helicase YP_889167.1 5002521 D 246196 CDS YP_889168.1 118469240 4535376 5004664..5006106 1 NC_008596.1 LpqM protein 5006106 4535376 MSMEG_4913 Mycobacterium smegmatis str. MC2 155 LpqM protein YP_889168.1 5004664 D 246196 CDS YP_889169.1 118468446 4536894 complement(5006124..5006972) 1 NC_008596.1 virginiamycin B hydrolase 5006972 4536894 MSMEG_4914 Mycobacterium smegmatis str. MC2 155 virginiamycin B hydrolase YP_889169.1 5006124 R 246196 CDS YP_889170.1 118470308 4533366 complement(5006969..5009569) 1 NC_008596.1 identified by match to protein family HMM PF00343; match to protein family HMM TIGR02094; alpha-glucan phosphorylase 5009569 4533366 MSMEG_4915 Mycobacterium smegmatis str. MC2 155 alpha-glucan phosphorylase YP_889170.1 5006969 R 246196 CDS YP_889171.1 118469285 4532624 5009741..5011819 1 NC_008596.1 identified by match to protein family HMM PF00128; alpha-amylase 5011819 4532624 MSMEG_4916 Mycobacterium smegmatis str. MC2 155 alpha-amylase YP_889171.1 5009741 D 246196 CDS YP_889172.1 118468288 4535775 5011827..5014037 1 NC_008596.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 5014037 glgB 4535775 glgB Mycobacterium smegmatis str. MC2 155 glycogen branching protein YP_889172.1 5011827 D 246196 CDS YP_889173.1 118467436 4535445 complement(5014034..5014924) 1 NC_008596.1 identified by match to protein family HMM PF00085; match to protein family HMM PF07719; hypothetical protein 5014924 4535445 MSMEG_4917 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889173.1 5014034 R 246196 CDS YP_889174.1 118471053 4537126 complement(5014938..5015321) 1 NC_008596.1 hypothetical protein 5015321 4537126 MSMEG_4919 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889174.1 5014938 R 246196 CDS YP_889175.1 118469481 4534455 complement(5015379..5016614) 1 NC_008596.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 5016614 4534455 MSMEG_4920 Mycobacterium smegmatis str. MC2 155 acetyl-CoA acetyltransferase YP_889175.1 5015379 R 246196 CDS YP_889176.1 118470973 4534545 5016676..5017149 1 NC_008596.1 identified by match to protein family HMM PF00903; match to protein family HMM TIGR03081; methylmalonyl-CoA epimerase 5017149 mce 4534545 mce Mycobacterium smegmatis str. MC2 155 methylmalonyl-CoA epimerase YP_889176.1 5016676 D 246196 CDS YP_889177.1 118472410 4531331 complement(5017167..5017466) 1 NC_008596.1 hypothetical protein 5017466 4531331 MSMEG_4922 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889177.1 5017167 R 246196 CDS YP_889178.1 118471661 4536498 complement(5017466..5018140) 1 NC_008596.1 identified by match to protein family HMM PF01939; hypothetical protein 5018140 4536498 MSMEG_4923 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889178.1 5017466 R 246196 CDS YP_889179.1 118473953 4533899 5018187..5019794 1 NC_008596.1 identified by match to protein family HMM PF00211; match to protein family HMM PF00672; adenylate cyclase 5019794 4533899 MSMEG_4924 Mycobacterium smegmatis str. MC2 155 adenylate cyclase YP_889179.1 5018187 D 246196 CDS YP_889180.1 118468735 4534263 5019822..5021360 1 NC_008596.1 identified by match to protein family HMM PF00165; match to protein family HMM PF00730; match to protein family HMM PF02805; match to protein family HMM PF06029; transcriptional regulator, Ada family protein/DNA-3-methyladenine glycosylase II 5021360 4534263 MSMEG_4925 Mycobacterium smegmatis str. MC2 155 transcriptional regulator, Ada family protein/DNA-3-methyladenine glycosylase II YP_889180.1 5019822 D 246196 CDS YP_889181.1 118469736 4532020 5021497..5022819 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 5022819 4532020 MSMEG_4926 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_889181.1 5021497 D 246196 CDS YP_889182.1 118471536 4537616 complement(5022827..5023528) 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 5023528 4537616 MSMEG_4927 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_889182.1 5022827 R 246196 CDS YP_889183.1 118472271 4534797 5023632..5024129 1 NC_008596.1 identified by match to protein family HMM PF01035; match to protein family HMM PF02870; match to protein family HMM TIGR00589; methylated-DNA--protein-cysteine methyltransferase 5024129 4534797 MSMEG_4928 Mycobacterium smegmatis str. MC2 155 methylated-DNA--protein-cysteine methyltransferase YP_889183.1 5023632 D 246196 CDS YP_889184.1 118470278 4537539 complement(5029849..5031105) 1 NC_008596.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 5031105 murA 4537539 murA Mycobacterium smegmatis str. MC2 155 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_889184.1 5029849 R 246196 CDS YP_889185.1 118467664 4536930 5031204..5031776 1 NC_008596.1 identified by match to protein family HMM PF01923; match to protein family HMM TIGR00636; ATP:cob(I)alamin adenosyltransferase 5031776 4536930 MSMEG_4934 Mycobacterium smegmatis str. MC2 155 ATP:cob(I)alamin adenosyltransferase YP_889185.1 5031204 D 246196 CDS YP_889186.1 118468457 4536905 complement(5031770..5032204) 1 NC_008596.1 hypothetical protein 5032204 4536905 MSMEG_4933 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889186.1 5031770 R 246196 CDS YP_889187.1 118468006 4533087 complement(5032225..5032590) 1 NC_008596.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 5032590 atpC 4533087 atpC Mycobacterium smegmatis str. MC2 155 F0F1 ATP synthase subunit epsilon YP_889187.1 5032225 R 246196 CDS YP_889188.1 118471849 4536303 complement(5032627..5034054) 1 NC_008596.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 5034054 atpD 4536303 atpD Mycobacterium smegmatis str. MC2 155 F0F1 ATP synthase subunit beta YP_889188.1 5032627 R 246196 CDS YP_889189.1 118473255 4537316 complement(5034092..5035015) 1 NC_008596.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 5035015 atpG 4537316 atpG Mycobacterium smegmatis str. MC2 155 F0F1 ATP synthase subunit gamma YP_889189.1 5034092 R 246196 CDS YP_889190.1 118470627 4532985 complement(5035023..5036669) 1 NC_008596.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 5036669 atpA 4532985 atpA Mycobacterium smegmatis str. MC2 155 F0F1 ATP synthase subunit alpha YP_889190.1 5035023 R 246196 CDS YP_889191.1 118469194 4535783 complement(5036716..5038053) 1 NC_008596.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the subunit delta is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 5038053 4535783 MSMEG_4939 Mycobacterium smegmatis str. MC2 155 F0F1 ATP synthase subunit delta YP_889191.1 5036716 R 246196 CDS YP_889192.1 118471133 4531820 complement(5038054..5038566) 1 NC_008596.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 5038566 4531820 MSMEG_4940 Mycobacterium smegmatis str. MC2 155 F0F1 ATP synthase subunit B YP_889192.1 5038054 R 246196 CDS YP_889193.1 118467835 4535462 complement(5038576..5038836) 1 NC_008596.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 5038836 atpE 4535462 atpE Mycobacterium smegmatis str. MC2 155 F0F1 ATP synthase subunit C YP_889193.1 5038576 R 246196 CDS YP_889194.1 118469891 4533210 complement(5038938..5039696) 1 NC_008596.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 5039696 atpB 4533210 atpB Mycobacterium smegmatis str. MC2 155 F0F1 ATP synthase subunit A YP_889194.1 5038938 R 246196 CDS YP_889195.1 118471766 4536375 complement(5039725..5040171) 1 NC_008596.1 hypothetical protein 5040171 4536375 MSMEG_4943 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889195.1 5039725 R 246196 CDS YP_889196.1 118467751 4535651 complement(5040168..5040740) 1 NC_008596.1 hypothetical protein 5040740 4535651 MSMEG_4944 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889196.1 5040168 R 246196 CDS YP_889197.1 118473180 4532582 5040459..5041781 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 5041781 4532582 MSMEG_4945 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_889197.1 5040459 D 246196 CDS YP_889198.1 118471279 4532153 complement(5041789..5042490) 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 5042490 4532153 MSMEG_4946 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_889198.1 5041789 R 246196 CDS YP_889199.1 118469278 4532248 complement(5042722..5043942) 1 NC_008596.1 identified by match to protein family HMM PF00953; glycosyl trasferase 5043942 4532248 MSMEG_4947 Mycobacterium smegmatis str. MC2 155 glycosyl trasferase YP_889199.1 5042722 R 246196 CDS YP_889200.1 118467540 4536002 complement(5043950..5044615) 1 NC_008596.1 identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Sua5/YciO/YrdC/YwlC family protein 5044615 4536002 MSMEG_4948 Mycobacterium smegmatis str. MC2 155 Sua5/YciO/YrdC/YwlC family protein YP_889200.1 5043950 R 246196 CDS YP_889201.1 118468920 4537082 complement(5044653..5045498) 1 NC_008596.1 identified by match to protein family HMM PF05175; match to protein family HMM TIGR00536; HemK family modification methylase 5045498 4537082 MSMEG_4949 Mycobacterium smegmatis str. MC2 155 HemK family modification methylase YP_889201.1 5044653 R 246196 CDS YP_889202.1 118469567 4531441 complement(5045509..5046588) 1 NC_008596.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 5046588 prfA 4531441 prfA Mycobacterium smegmatis str. MC2 155 peptide chain release factor 1 YP_889202.1 5045509 R 246196 CDS YP_889203.1 118469064 4537250 complement(5046684..5046911) 1 NC_008596.1 identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105; 50S ribosomal protein L31 5046911 rpmE 4537250 rpmE Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L31 YP_889203.1 5046684 R 246196 CDS YP_889204.1 118468077 4533024 complement(5047025..5048623) 1 NC_008596.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 5048623 4533024 MSMEG_4952 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_889204.1 5047025 R 246196 CDS YP_889205.1 118467637 4534212 5048768..5049373 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 5049373 4534212 MSMEG_4953 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_889205.1 5048768 D 246196 CDS YP_889206.1 118471197 4531491 complement(5049428..5051422) 1 NC_008596.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 5051422 rho 4531491 rho Mycobacterium smegmatis str. MC2 155 transcription termination factor Rho YP_889206.1 5049428 R 246196 CDS YP_889207.1 118470495 4537179 complement(5051708..5052661) 1 NC_008596.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 5052661 thrB 4537179 thrB Mycobacterium smegmatis str. MC2 155 homoserine kinase YP_889207.1 5051708 R 246196 CDS YP_889208.1 118468890 4536683 complement(5052675..5053757) 1 NC_008596.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 5053757 thrC 4536683 thrC Mycobacterium smegmatis str. MC2 155 threonine synthase YP_889208.1 5052675 R 246196 CDS YP_889209.1 118473179 4532581 complement(5053754..5055073) 1 NC_008596.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 5055073 4532581 MSMEG_4957 Mycobacterium smegmatis str. MC2 155 homoserine dehydrogenase YP_889209.1 5053754 R 246196 CDS YP_889210.1 118467936 4533415 complement(5055070..5056494) 1 NC_008596.1 identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048; diaminopimelate decarboxylase 5056494 lysA 4533415 lysA Mycobacterium smegmatis str. MC2 155 diaminopimelate decarboxylase YP_889210.1 5055070 R 246196 CDS YP_889211.1 118468738 4534266 complement(5056491..5058143) 1 NC_008596.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 5058143 argS 4534266 argS Mycobacterium smegmatis str. MC2 155 arginyl-tRNA synthetase YP_889211.1 5056491 R 246196 CDS YP_889212.1 118473514 4533876 complement(5059059..5059334) 1 NC_008596.1 hypothetical protein 5059334 4533876 MSMEG_4961 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889212.1 5059059 R 246196 CDS YP_889213.1 118473473 4531175 5059596..5060855 1 NC_008596.1 identified by match to protein family HMM PF00668; peptide synthetase ScpsB 5060855 4531175 MSMEG_4963 Mycobacterium smegmatis str. MC2 155 peptide synthetase ScpsB YP_889213.1 5059596 D 246196 CDS YP_889214.1 118473360 4530836 complement(5060847..5062073) 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01494; hypothetical protein 5062073 4530836 MSMEG_4962 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889214.1 5060847 R 246196 CDS YP_889215.1 118472406 4531327 complement(5062076..5062879) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5062879 4531327 MSMEG_4964 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889215.1 5062076 R 246196 CDS YP_889216.1 118467397 4535818 complement(5062989..5063429) 1 NC_008596.1 hypothetical protein 5063429 4535818 MSMEG_4965 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889216.1 5062989 R 246196 CDS YP_889217.1 118469752 4532037 complement(5063477..5064157) 1 NC_008596.1 identified by match to protein family HMM PF05988; CalU12 protein 5064157 4532037 MSMEG_4966 Mycobacterium smegmatis str. MC2 155 CalU12 protein YP_889217.1 5063477 R 246196 CDS YP_889218.1 118469879 4536571 complement(5064154..5065035) 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 5065035 4536571 MSMEG_4967 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889218.1 5064154 R 246196 CDS YP_889219.1 118468860 4535633 5065204..5066415 1 NC_008596.1 identified by match to protein family HMM PF02518; match to protein family HMM PF07730; two-component system sensor kinase 5066415 4535633 MSMEG_4968 Mycobacterium smegmatis str. MC2 155 two-component system sensor kinase YP_889219.1 5065204 D 246196 CDS YP_889220.1 118467880 4535254 5066403..5067047 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545; two-component system response regulator 5067047 4535254 MSMEG_4969 Mycobacterium smegmatis str. MC2 155 two-component system response regulator YP_889220.1 5066403 D 246196 CDS YP_889221.1 118470401 4533462 5067065..5067952 1 NC_008596.1 hypothetical protein 5067952 4533462 MSMEG_4970 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889221.1 5067065 D 246196 CDS YP_889222.1 118472141 4532478 complement(5067953..5068975) 1 NC_008596.1 identified by match to protein family HMM PF03060; oxidoreductase 5068975 4532478 MSMEG_4971 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_889222.1 5067953 R 246196 CDS YP_889223.1 118473631 4531027 complement(5068972..5069505) 1 NC_008596.1 identified by match to protein family HMM PF00583; acetyltransferase 5069505 4531027 MSMEG_4972 Mycobacterium smegmatis str. MC2 155 acetyltransferase YP_889223.1 5068972 R 246196 CDS YP_889224.1 118467374 4534059 5069552..5069935 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase/bleomycin resistance protein/dioxygenase 5069935 4534059 MSMEG_4973 Mycobacterium smegmatis str. MC2 155 glyoxalase/bleomycin resistance protein/dioxygenase YP_889224.1 5069552 D 246196 CDS YP_889225.1 118469239 4535375 complement(5069936..5070406) 1 NC_008596.1 identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; rrf2 family transcriptional regulator 5070406 4535375 MSMEG_4974 Mycobacterium smegmatis str. MC2 155 rrf2 family transcriptional regulator YP_889225.1 5069936 R 246196 CDS YP_889226.1 118470797 4536081 complement(5070449..5071123) 1 NC_008596.1 identified by match to protein family HMM PF01243; flavin-nucleotide-binding protein 5071123 4536081 MSMEG_4975 Mycobacterium smegmatis str. MC2 155 flavin-nucleotide-binding protein YP_889226.1 5070449 R 246196 CDS YP_889227.1 118471755 4536363 complement(5071120..5071716) 1 NC_008596.1 identified by match to protein family HMM PF00857; isochorismatase hydrolase 5071716 4536363 MSMEG_4976 Mycobacterium smegmatis str. MC2 155 isochorismatase hydrolase YP_889227.1 5071120 R 246196 CDS YP_889228.1 118471042 4536744 complement(5071765..5072496) 1 NC_008596.1 identified by similarity to SP:P22255; match to protein family HMM PF00459; 3'(2'),5'-bisphosphate nucleotidase 5072496 4536744 MSMEG_4977 Mycobacterium smegmatis str. MC2 155 3'(2'),5'-bisphosphate nucleotidase YP_889228.1 5071765 R 246196 CDS YP_889229.1 118469224 4533278 complement(5072493..5074346) 1 NC_008596.1 in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase 5074346 cysNC 4533278 cysNC Mycobacterium smegmatis str. MC2 155 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase YP_889229.1 5072493 R 246196 CDS YP_889230.1 118467703 4537710 complement(5074346..5075281) 1 NC_008596.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 5075281 cysD 4537710 cysD Mycobacterium smegmatis str. MC2 155 sulfate adenylyltransferase subunit 2 YP_889230.1 5074346 R 246196 CDS YP_889231.1 118471982 4536129 complement(5075384..5076751) 1 NC_008596.1 identified by match to protein family HMM PF07690; major facilitator superfamily protein 5076751 4536129 MSMEG_4980 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_889231.1 5075384 R 246196 CDS YP_889232.1 118470608 4532111 complement(5076771..5077787) 1 NC_008596.1 identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein 5077787 4532111 MSMEG_4981 Mycobacterium smegmatis str. MC2 155 phosphotransferase enzyme family protein YP_889232.1 5076771 R 246196 CDS YP_889233.1 118471091 4535856 complement(5077781..5078908) 1 NC_008596.1 hypothetical protein 5078908 4535856 MSMEG_4982 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889233.1 5077781 R 246196 CDS YP_889234.1 118471641 4536517 5078986..5079549 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5079549 4536517 MSMEG_4983 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889234.1 5078986 D 246196 CDS YP_889235.1 118467813 4535990 5079613..5080017 1 NC_008596.1 identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; hypothetical protein 5080017 4535990 MSMEG_4984 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889235.1 5079613 D 246196 CDS YP_889236.1 118472210 4530868 complement(5080106..5080597) 1 NC_008596.1 identified by match to protein family HMM PF00484; carbonic anhydrase 5080597 4530868 MSMEG_4985 Mycobacterium smegmatis str. MC2 155 carbonic anhydrase YP_889236.1 5080106 R 246196 CDS YP_889237.1 118469045 4536859 complement(5080643..5082547) 1 NC_008596.1 identified by match to protein family HMM PF02366; glycosyl transferase family protein 5082547 4536859 MSMEG_4986 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_889237.1 5080643 R 246196 CDS YP_889238.1 118474028 4533441 complement(5082551..5083849) 1 NC_008596.1 identified by match to protein family HMM PF00535; match to protein family HMM PF04138; glycosyl transferase family protein 5083849 4533441 MSMEG_4987 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_889238.1 5082551 R 246196 CDS YP_889239.1 118467660 4535008 complement(5083905..5085776) 1 NC_008596.1 identified by match to protein family HMM PF02366; integral membrane protein 5085776 4535008 MSMEG_4988 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_889239.1 5083905 R 246196 CDS YP_889240.1 118470188 4530823 complement(5085828..5087411) 1 NC_008596.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 5087411 4530823 MSMEG_4989 Mycobacterium smegmatis str. MC2 155 sensor histidine kinase YP_889240.1 5085828 R 246196 CDS YP_889241.1 118470471 4536780 complement(5087389..5088138) 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 5088138 4536780 MSMEG_4990 Mycobacterium smegmatis str. MC2 155 DNA-binding response regulator YP_889241.1 5087389 R 246196 CDS YP_889242.1 118470987 4531907 5088250..5088714 1 NC_008596.1 hypothetical protein 5088714 4531907 MSMEG_4992 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889242.1 5088250 D 246196 CDS YP_889243.1 118473701 4533249 complement(5088696..5088929) 1 NC_008596.1 hypothetical protein 5088929 4533249 MSMEG_4991 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889243.1 5088696 R 246196 CDS YP_889244.1 118470316 4535194 complement(5089057..5089329) 1 NC_008596.1 hypothetical protein 5089329 4535194 MSMEG_4993 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889244.1 5089057 R 246196 CDS YP_889245.1 118469766 4532830 5089394..5089675 1 NC_008596.1 flagella membrane glycoprotein 1B 5089675 4532830 MSMEG_4994 Mycobacterium smegmatis str. MC2 155 flagella membrane glycoprotein 1B YP_889245.1 5089394 D 246196 CDS YP_889246.1 118468691 4534681 5089843..5090820 1 NC_008596.1 identified by match to protein family HMM PF00528; oligopeptide transporter permease AppB 5090820 4534681 MSMEG_4995 Mycobacterium smegmatis str. MC2 155 oligopeptide transporter permease AppB YP_889246.1 5089843 D 246196 CDS YP_889247.1 118473585 4534858 5090817..5091749 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 5091749 oppC 4534858 oppC Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_889247.1 5090817 D 246196 CDS YP_889248.1 118468762 4534251 5091746..5093590 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein 5093590 oppD 4534251 oppD Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_889248.1 5091746 D 246196 CDS YP_889249.1 118472981 4532261 5093630..5095336 1 NC_008596.1 identified by match to protein family HMM PF00496; extracellular solute-binding protein 5095336 4532261 MSMEG_4999 Mycobacterium smegmatis str. MC2 155 extracellular solute-binding protein YP_889249.1 5093630 D 246196 CDS YP_889250.1 118470368 4532315 complement(5095326..5096555) 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 5096555 4532315 MSMEG_4998 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_889250.1 5095326 R 246196 CDS YP_889251.1 118471078 4537521 5096638..5097858 1 NC_008596.1 identified by match to protein family HMM PF08028; pesticide degrading monooxygenase 5097858 4537521 MSMEG_5001 Mycobacterium smegmatis str. MC2 155 pesticide degrading monooxygenase YP_889251.1 5096638 D 246196 CDS YP_889252.1 118473513 4533875 complement(5097849..5098754) 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 5098754 4533875 MSMEG_5000 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_889252.1 5097849 R 246196 CDS YP_889253.1 118473015 4532336 5098832..5099509 1 NC_008596.1 identified by match to protein family HMM PF01596; O-methyltransferase, family protein 3 5099509 4532336 MSMEG_5003 Mycobacterium smegmatis str. MC2 155 O-methyltransferase, family protein 3 YP_889253.1 5098832 D 246196 CDS YP_889254.1 118467978 4535160 complement(5099506..5102139) 1 NC_008596.1 hypothetical protein 5102139 4535160 MSMEG_5002 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889254.1 5099506 R 246196 CDS YP_889255.1 118473435 4534126 complement(5102136..5103290) 1 NC_008596.1 identified by match to protein family HMM PF00149; DNA repair exonuclease 5103290 4534126 MSMEG_5004 Mycobacterium smegmatis str. MC2 155 DNA repair exonuclease YP_889255.1 5102136 R 246196 CDS YP_889256.1 118472268 4534794 5103405..5103905 1 NC_008596.1 identified by match to protein family HMM PF00300; phosphohistidine phosphatase 5103905 4534794 MSMEG_5006 Mycobacterium smegmatis str. MC2 155 phosphohistidine phosphatase YP_889256.1 5103405 D 246196 CDS YP_889257.1 118468299 4533057 complement(5103902..5104462) 1 NC_008596.1 LprC protein 5104462 4533057 MSMEG_5005 Mycobacterium smegmatis str. MC2 155 LprC protein YP_889257.1 5103902 R 246196 CDS YP_889258.1 118469410 4531963 complement(5104459..5104992) 1 NC_008596.1 LprB protein 5104992 4531963 MSMEG_5007 Mycobacterium smegmatis str. MC2 155 LprB protein YP_889258.1 5104459 R 246196 CDS YP_889259.1 118473686 4531083 5105176..5106912 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 5106912 4531083 MSMEG_5008 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_889259.1 5105176 D 246196 CDS YP_889260.1 118470919 4533967 5106924..5108801 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter 5108801 4533967 MSMEG_5009 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_889260.1 5106924 D 246196 CDS YP_889261.1 118469659 4535069 complement(5108808..5109329) 1 NC_008596.1 hypothetical protein 5109329 4535069 MSMEG_5010 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889261.1 5108808 R 246196 CDS YP_889262.1 118470418 4534191 5109367..5109666 1 NC_008596.1 trans-sialidase 5109666 4534191 MSMEG_5012 Mycobacterium smegmatis str. MC2 155 trans-sialidase YP_889262.1 5109367 D 246196 CDS YP_889263.1 118468091 4536019 complement(5109397..5109594) 1 NC_008596.1 hypothetical protein 5109594 4536019 MSMEG_5011 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889263.1 5109397 R 246196 CDS YP_889264.1 118473086 4533161 5109663..5110502 1 NC_008596.1 identified by match to protein family HMM PF01987; hypothetical protein 5110502 4533161 MSMEG_5013 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889264.1 5109663 D 246196 CDS YP_889265.1 118468885 4536678 complement(5110506..5112737) 1 NC_008596.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; ATPase P 5112737 4536678 MSMEG_5014 Mycobacterium smegmatis str. MC2 155 ATPase P YP_889265.1 5110506 R 246196 CDS YP_889266.1 118468012 4533093 complement(5112759..5113583) 1 NC_008596.1 hypothetical protein 5113583 4533093 MSMEG_5015 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889266.1 5112759 R 246196 CDS YP_889267.1 118470705 4532542 complement(5113573..5113779) 1 NC_008596.1 identified by match to protein family HMM PF00403; hypothetical protein 5113779 4532542 MSMEG_5016 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889267.1 5113573 R 246196 CDS YP_889268.1 118471884 4536260 complement(5113830..5114435) 1 NC_008596.1 identified by match to protein family HMM PF03713; lipoprotein 5114435 4536260 MSMEG_5017 Mycobacterium smegmatis str. MC2 155 lipoprotein YP_889268.1 5113830 R 246196 CDS YP_889269.1 118467881 4535256 complement(5114459..5115583) 1 NC_008596.1 identified by match to protein family HMM PF00211; adenylate and guanylate cyclase catalytic domain-containing protein 5115583 4535256 MSMEG_5018 Mycobacterium smegmatis str. MC2 155 adenylate and guanylate cyclase catalytic domain-containing protein YP_889269.1 5114459 R 246196 CDS YP_889270.1 118467874 4535248 complement(5115599..5116885) 1 NC_008596.1 identified by match to protein family HMM PF01590; regulatory protein 5116885 4535248 MSMEG_5019 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_889270.1 5115599 R 246196 CDS YP_889271.1 118468413 4534555 complement(5116927..5117706) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM TIGR02415; acetoin(diacetyl) reductase 5117706 4534555 MSMEG_5020 Mycobacterium smegmatis str. MC2 155 acetoin(diacetyl) reductase YP_889271.1 5116927 R 246196 CDS YP_889272.1 118471815 4536308 complement(5117738..5118784) 1 NC_008596.1 identified by match to protein family HMM PF00107; alcohol dehydrogenase 5118784 4536308 MSMEG_5021 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_889272.1 5117738 R 246196 CDS YP_889273.1 118472104 4537485 5118895..5120736 1 NC_008596.1 identified by match to protein family HMM PF07992; flavin-containing monooxygenase FMO 5120736 4537485 MSMEG_5022 Mycobacterium smegmatis str. MC2 155 flavin-containing monooxygenase FMO YP_889273.1 5118895 D 246196 CDS YP_889274.1 118471116 4533475 5120775..5121482 1 NC_008596.1 identified by match to protein family HMM PF01522; chitooligosaccharide deacetylase 5121482 4533475 MSMEG_5023 Mycobacterium smegmatis str. MC2 155 chitooligosaccharide deacetylase YP_889274.1 5120775 D 246196 CDS YP_889275.1 118473922 4537360 5121479..5121967 1 NC_008596.1 T/U mismatch-specific DNA glycosylase 5121967 4537360 MSMEG_5024 Mycobacterium smegmatis str. MC2 155 T/U mismatch-specific DNA glycosylase YP_889275.1 5121479 D 246196 CDS YP_889276.1 118472566 4534150 5122023..5123474 1 NC_008596.1 identified by match to protein family HMM PF02720; hypothetical protein 5123474 4534150 MSMEG_5026 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889276.1 5122023 D 246196 CDS YP_889277.1 118468982 4535092 complement(5123453..5124289) 1 NC_008596.1 transcriptional regulator 5124289 4535092 MSMEG_5025 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_889277.1 5123453 R 246196 CDS YP_889278.1 118469517 4536721 5124317..5124787 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase 5124787 4536721 MSMEG_5027 Mycobacterium smegmatis str. MC2 155 glyoxalase YP_889278.1 5124317 D 246196 CDS YP_889279.1 118468021 4533102 5124797..5125234 1 NC_008596.1 identified by match to protein family HMM PF01230; HIT family protein 5125234 4533102 MSMEG_5028 Mycobacterium smegmatis str. MC2 155 HIT family protein YP_889279.1 5124797 D 246196 CDS YP_889280.1 118472192 4530850 5125244..5125693 1 NC_008596.1 identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 5125693 4530850 MSMEG_5030 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889280.1 5125244 D 246196 CDS YP_889281.1 118472961 4532299 complement(5125690..5126739) 1 NC_008596.1 identified by match to protein family HMM PF00296; alkanal monooxygenase subunit alpha 5126739 4532299 MSMEG_5029 Mycobacterium smegmatis str. MC2 155 alkanal monooxygenase subunit alpha YP_889281.1 5125690 R 246196 CDS YP_889282.1 118473070 4534622 complement(5126753..5127625) 1 NC_008596.1 identified by match to protein family HMM PF03167; uracil-DNA glycosylase 5127625 4534622 MSMEG_5031 Mycobacterium smegmatis str. MC2 155 uracil-DNA glycosylase YP_889282.1 5126753 R 246196 CDS YP_889283.1 118470884 4537189 complement(5128678..5129328) 1 NC_008596.1 identified by match to protein family HMM PF01638; transcriptional regulator 5129328 4537189 MSMEG_5032 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_889283.1 5128678 R 246196 CDS YP_889284.1 118470383 4532330 5129405..5130091 1 NC_008596.1 hypothetical protein 5130091 4532330 MSMEG_5034 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889284.1 5129405 D 246196 CDS YP_889285.1 118467495 4537382 5130102..5130584 1 NC_008596.1 hypothetical protein 5130584 4537382 MSMEG_5035 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889285.1 5130102 D 246196 CDS YP_889286.1 118472174 4533712 5130603..5131970 1 NC_008596.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02913; oxidoreductase, FAD-binding 5131970 4533712 MSMEG_5037 Mycobacterium smegmatis str. MC2 155 oxidoreductase, FAD-binding YP_889286.1 5130603 D 246196 CDS YP_889287.1 118467848 4535475 complement(5131967..5132719) 1 NC_008596.1 identified by match to protein family HMM PF01694; rhomboid family protein 5132719 4535475 MSMEG_5036 Mycobacterium smegmatis str. MC2 155 rhomboid family protein YP_889287.1 5131967 R 246196 CDS YP_889288.1 118470510 4537563 5132901..5134121 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 5134121 4537563 MSMEG_5038 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_889288.1 5132901 D 246196 CDS YP_889289.1 118470212 4532506 5134121..5134708 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5134708 4532506 MSMEG_5040 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889289.1 5134121 D 246196 CDS YP_889290.1 118471979 4536165 complement(5134693..5135370) 1 NC_008596.1 identified by match to protein family HMM PF04954; match to protein family HMM PF08021; siderophore-interacting protein 5135370 4536165 MSMEG_5039 Mycobacterium smegmatis str. MC2 155 siderophore-interacting protein YP_889290.1 5134693 R 246196 CDS YP_889291.1 118472153 4535679 complement(5135426..5136574) 1 NC_008596.1 identified by match to protein family HMM PF01757; acyltransferase 5136574 4535679 MSMEG_5041 Mycobacterium smegmatis str. MC2 155 acyltransferase YP_889291.1 5135426 R 246196 CDS YP_889292.1 118470234 4536753 complement(5136571..5138316) 1 NC_008596.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; ATP-dependent rna helicase, dead/deah box family protein 5138316 4536753 MSMEG_5042 Mycobacterium smegmatis str. MC2 155 ATP-dependent rna helicase, dead/deah box family protein YP_889292.1 5136571 R 246196 CDS YP_889293.1 118473892 4536587 5138407..5138946 1 NC_008596.1 LprE protein 5138946 4536587 MSMEG_5043 Mycobacterium smegmatis str. MC2 155 LprE protein YP_889293.1 5138407 D 246196 CDS YP_889294.1 118471145 4531832 5138997..5142446 1 NC_008596.1 ATPase 5142446 4531832 MSMEG_5044 Mycobacterium smegmatis str. MC2 155 ATPase YP_889294.1 5138997 D 246196 CDS YP_889295.1 118473107 4531168 5142459..5143814 1 NC_008596.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02913; D-2-hydroxyacid dehydrogenase 5143814 4531168 MSMEG_5045 Mycobacterium smegmatis str. MC2 155 D-2-hydroxyacid dehydrogenase YP_889295.1 5142459 D 246196 CDS YP_889296.1 118468657 4535233 complement(5143822..5145528) 1 NC_008596.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; drug transporter 5145528 4535233 MSMEG_5046 Mycobacterium smegmatis str. MC2 155 drug transporter YP_889296.1 5143822 R 246196 CDS YP_889297.1 118470173 4534351 complement(5145619..5146872) 1 NC_008596.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00710; drug resistance transporter Bcr/CflA subfamily protein 5146872 4534351 MSMEG_5047 Mycobacterium smegmatis str. MC2 155 drug resistance transporter Bcr/CflA subfamily protein YP_889297.1 5145619 R 246196 CDS YP_889298.1 118473049 4533202 5147070..5147831 1 NC_008596.1 hypothetical protein 5147831 4533202 MSMEG_5048 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889298.1 5147070 D 246196 CDS YP_889299.1 118472055 4535402 5147981..5151664 1 NC_008596.1 kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth; alpha-ketoglutarate decarboxylase 5151664 kgd 4535402 kgd Mycobacterium smegmatis str. MC2 155 alpha-ketoglutarate decarboxylase YP_889299.1 5147981 D 246196 CDS YP_889300.1 118468198 4536637 5151761..5153071 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily protein 5153071 4536637 MSMEG_5051 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_889300.1 5151761 D 246196 CDS YP_889301.1 118470259 4537151 complement(5153068..5153832) 1 NC_008596.1 identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase 5153832 map 4537151 map Mycobacterium smegmatis str. MC2 155 methionine aminopeptidase YP_889301.1 5153068 R 246196 CDS YP_889302.1 118470436 4532227 5153902..5154162 1 NC_008596.1 identified by match to protein family HMM PF01381; DNA-binding protein 5154162 4532227 MSMEG_5052 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_889302.1 5153902 D 246196 CDS YP_889303.1 118471115 4533474 5154241..5155065 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain alcohol dehydrogenase 5155065 4533474 MSMEG_5053 Mycobacterium smegmatis str. MC2 155 short chain alcohol dehydrogenase YP_889303.1 5154241 D 246196 CDS YP_889304.1 118473183 4533300 complement(5155073..5155915) 1 NC_008596.1 identified by match to protein family HMM PF04069; ABC transporter substrate-binding protein 5155915 4533300 MSMEG_5054 Mycobacterium smegmatis str. MC2 155 ABC transporter substrate-binding protein YP_889304.1 5155073 R 246196 CDS YP_889305.1 118467566 4532856 complement(5155924..5157066) 1 NC_008596.1 identified by match to protein family HMM PF00390; match to protein family HMM PF03949; NAD-dependent malic enzyme 5157066 4532856 MSMEG_5055 Mycobacterium smegmatis str. MC2 155 NAD-dependent malic enzyme YP_889305.1 5155924 R 246196 CDS YP_889306.1 118469365 4535879 5157213..5158280 1 NC_008596.1 identified by match to protein family HMM PF01544; match to protein family HMM TIGR00383; magnesium and cobalt transporter CorA 5158280 corA 4535879 corA Mycobacterium smegmatis str. MC2 155 magnesium and cobalt transporter CorA YP_889306.1 5157213 D 246196 CDS YP_889307.1 118470766 4533669 complement(5158285..5158890) 1 NC_008596.1 hypothetical protein 5158890 4533669 MSMEG_5057 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889307.1 5158285 R 246196 CDS YP_889308.1 118473047 4533200 complement(5158887..5160107) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 5160107 4533200 MSMEG_5058 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_889308.1 5158887 R 246196 CDS YP_889309.1 118473813 4531623 complement(5160112..5160948) 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 5160948 4531623 MSMEG_5059 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_889309.1 5160112 R 246196 CDS YP_889310.1 118471165 4530955 complement(5160948..5161865) 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 5161865 4530955 MSMEG_5060 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_889310.1 5160948 R 246196 CDS YP_889311.1 118470297 4533355 complement(5161862..5163259) 1 NC_008596.1 identified by match to protein family HMM PF01547; extracellular solute-binding protein 5163259 4533355 MSMEG_5061 Mycobacterium smegmatis str. MC2 155 extracellular solute-binding protein YP_889311.1 5161862 R 246196 CDS YP_889312.1 118467634 4534209 complement(5163424..5163882) 1 NC_008596.1 hypothetical protein 5163882 4534209 MSMEG_5062 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889312.1 5163424 R 246196 CDS YP_889313.1 118471769 4536378 5164005..5164454 1 NC_008596.1 integral membrane protein 5164454 4536378 MSMEG_5063 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_889313.1 5164005 D 246196 CDS YP_889314.1 118473176 4532578 complement(5164473..5165429) 1 NC_008596.1 identified by match to protein family HMM PF03328; malyl-CoA lyase 5165429 4532578 MSMEG_5064 Mycobacterium smegmatis str. MC2 155 malyl-CoA lyase YP_889314.1 5164473 R 246196 CDS YP_889315.1 118472431 4532048 5165455..5166741 1 NC_008596.1 identified by match to protein family HMM PF00571; match to protein family HMM PF03448; Mg/Co/Ni transporter MgtE 5166741 4532048 MSMEG_5065 Mycobacterium smegmatis str. MC2 155 Mg/Co/Ni transporter MgtE YP_889315.1 5165455 D 246196 CDS YP_889316.1 118473368 4530844 5166738..5167286 1 NC_008596.1 identified by match to protein family HMM PF06210; integral membrane protein 5167286 4530844 MSMEG_5066 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_889316.1 5166738 D 246196 CDS YP_889317.1 118473902 4536968 5167401..5168702 1 NC_008596.1 hypothetical protein 5168702 4536968 MSMEG_5067 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889317.1 5167401 D 246196 CDS YP_889318.1 118471510 4536849 5168711..5169850 1 NC_008596.1 identified by match to protein family HMM PF01883; Mrp protein 5169850 4536849 MSMEG_5068 Mycobacterium smegmatis str. MC2 155 Mrp protein YP_889318.1 5168711 D 246196 CDS YP_889319.1 118472002 4533603 complement(5169857..5170255) 1 NC_008596.1 mediates the export of protein precursors bearing twin-arginine signal peptides; sec-independent translocase 5170255 4533603 MSMEG_5069 Mycobacterium smegmatis str. MC2 155 sec-independent translocase YP_889319.1 5169857 R 246196 CDS YP_889320.1 118469645 4535055 complement(5170258..5171754) 1 NC_008596.1 identified by match to protein family HMM PF00089; trypsin 5171754 4535055 MSMEG_5070 Mycobacterium smegmatis str. MC2 155 trypsin YP_889320.1 5170258 R 246196 CDS YP_889321.1 118470197 4532491 complement(5171803..5172201) 1 NC_008596.1 hypothetical protein 5172201 4532491 MSMEG_5071 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889321.1 5171803 R 246196 CDS YP_889322.1 118468250 4537435 complement(5172290..5173063) 1 NC_008596.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. tuberculosis this protein is involved in heat shock, oxidative stress and virulence; RNA polymerase sigma factor SigE 5173063 4537435 MSMEG_5072 Mycobacterium smegmatis str. MC2 155 RNA polymerase sigma factor SigE YP_889322.1 5172290 R 246196 CDS YP_889323.1 118468333 4532084 5173240..5173872 1 NC_008596.1 identified by match to protein family HMM PF01596; O-methyltransferase, family protein 3 5173872 4532084 MSMEG_5073 Mycobacterium smegmatis str. MC2 155 O-methyltransferase, family protein 3 YP_889323.1 5173240 D 246196 CDS YP_889324.1 118471216 4533819 5173964..5174614 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulatory protein 5174614 4533819 MSMEG_5074 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_889324.1 5173964 D 246196 CDS YP_889325.1 118473121 4531848 5174611..5175513 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 5175513 4531848 MSMEG_5075 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_889325.1 5174611 D 246196 CDS YP_889326.1 118474054 4531774 5175510..5177072 1 NC_008596.1 ABC transporter 5177072 4531774 MSMEG_5076 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_889326.1 5175510 D 246196 CDS YP_889327.1 118468536 4535361 5177093..5177767 1 NC_008596.1 integral membrane protein 5177767 4535361 MSMEG_5077 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_889327.1 5177093 D 246196 CDS YP_889328.1 118472348 4531599 5177781..5178398 1 NC_008596.1 hypothetical protein 5178398 4531599 MSMEG_5079 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889328.1 5177781 D 246196 CDS YP_889329.1 118473808 4531618 complement(5178352..5179566) 1 NC_008596.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 5179566 glgC 4531618 glgC Mycobacterium smegmatis str. MC2 155 glucose-1-phosphate adenylyltransferase YP_889329.1 5178352 R 246196 CDS YP_889330.1 118468274 4535761 5179761..5180924 1 NC_008596.1 identified by match to protein family HMM PF00534; match to protein family HMM TIGR02149; glycogen synthase 5180924 4535761 MSMEG_5080 Mycobacterium smegmatis str. MC2 155 glycogen synthase YP_889330.1 5179761 D 246196 CDS YP_889331.1 118468058 4534173 complement(5180979..5181146) 1 NC_008596.1 hypothetical protein 5181146 4534173 MSMEG_5081 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889331.1 5180979 R 246196 CDS YP_889332.1 118472328 4534219 complement(5181263..5181892) 1 NC_008596.1 identified by match to protein family HMM PF03352; match to protein family HMM TIGR00624; DNA-3-methyladenine glycosylase I 5181892 tag 4534219 tag Mycobacterium smegmatis str. MC2 155 DNA-3-methyladenine glycosylase I YP_889332.1 5181263 R 246196 CDS YP_889333.1 118471362 4535269 complement(5181889..5182272) 1 NC_008596.1 hypothetical protein 5182272 4535269 MSMEG_5083 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889333.1 5181889 R 246196 CDS YP_889334.1 118471383 4534977 complement(5182312..5183223) 1 NC_008596.1 identified by match to protein family HMM PF00535; glucosyl-3-phosphoglycerate synthase 5183223 4534977 MSMEG_5084 Mycobacterium smegmatis str. MC2 155 glucosyl-3-phosphoglycerate synthase YP_889334.1 5182312 R 246196 CDS YP_889335.1 118472372 4534762 complement(5183268..5184143) 1 NC_008596.1 identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 5184143 folP 4534762 folP Mycobacterium smegmatis str. MC2 155 dihydropteroate synthase YP_889335.1 5183268 R 246196 CDS YP_889336.1 118472996 4531288 complement(5184162..5185940) 1 NC_008596.1 activates fatty acids by binding to coenzyme A; may be involved in acyclic terpene utilization; long-chain-acyl-CoA synthetase 5185940 4531288 MSMEG_5086 Mycobacterium smegmatis str. MC2 155 long-chain-acyl-CoA synthetase YP_889336.1 5184162 R 246196 CDS YP_889337.1 118468584 4532711 complement(5186042..5186626) 1 NC_008596.1 identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730; hypothetical protein 5186626 4532711 MSMEG_5087 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889337.1 5186042 R 246196 CDS YP_889338.1 118469091 4537647 5186695..5188770 1 NC_008596.1 identified by match to protein family HMM PF07721; hypothetical protein 5188770 4537647 MSMEG_5088 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889338.1 5186695 D 246196 CDS YP_889339.1 118470001 4533124 5188843..5191101 1 NC_008596.1 hypothetical protein 5191101 4533124 MSMEG_5089 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889339.1 5188843 D 246196 CDS YP_889340.1 118471357 4533241 5191194..5191916 1 NC_008596.1 hypothetical protein 5191916 4533241 MSMEG_5090 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889340.1 5191194 D 246196 CDS YP_889341.1 118471274 4532148 5192084..5193022 1 NC_008596.1 hypothetical protein 5193022 4532148 MSMEG_5091 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889341.1 5192084 D 246196 CDS YP_889342.1 118473724 4536958 5193071..5193205 1 NC_008596.1 hypothetical protein 5193205 4536958 MSMEG_5092 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889342.1 5193071 D 246196 CDS YP_889343.1 118468847 4535620 5193475..5194176 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 5194176 4535620 MSMEG_5093 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_889343.1 5193475 D 246196 CDS YP_889344.1 118468079 4533026 complement(5194184..5195506) 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 5195506 4533026 MSMEG_5094 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_889344.1 5194184 R 246196 CDS YP_889345.1 118470977 4531897 complement(5196509..5196844) 1 NC_008596.1 identified by similarity to GP:16551202; match to protein family HMM PF01527; ISMsm1, transposase orfA 5196844 4531897 MSMEG_5096 Mycobacterium smegmatis str. MC2 155 ISMsm1, transposase orfA YP_889345.1 5196509 R 246196 CDS YP_889346.1 118472279 4534805 5196939..5197652 1 NC_008596.1 hypothetical protein 5197652 4534805 MSMEG_5097 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889346.1 5196939 D 246196 CDS YP_889347.1 118473138 4531199 5197576..5198595 1 NC_008596.1 hypothetical protein 5198595 4531199 MSMEG_5099 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889347.1 5197576 D 246196 CDS YP_889348.1 118468126 4535213 complement(5198422..5198538) 1 NC_008596.1 hypothetical protein 5198538 4535213 MSMEG_5098 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889348.1 5198422 R 246196 CDS YP_889349.1 118468183 4534397 5198683..5199513 1 NC_008596.1 hypothetical protein 5199513 4534397 MSMEG_5101 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889349.1 5198683 D 246196 CDS YP_889350.1 118470996 4533489 complement(5199494..5202979) 1 NC_008596.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 5202979 4533489 MSMEG_5100 Mycobacterium smegmatis str. MC2 155 indolepyruvate ferredoxin oxidoreductase YP_889350.1 5199494 R 246196 CDS YP_889351.1 118471913 4536214 complement(5203097..5204719) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 5204719 4536214 MSMEG_5102 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_889351.1 5203097 R 246196 CDS YP_889352.1 118468670 4535246 complement(5204819..5205886) 1 NC_008596.1 catalyzes the formation of succinate and diaminoheptanedioate from succinyldiaminoheptanedioate; succinyl-diaminopimelate desuccinylase 5205886 dapE 4535246 dapE Mycobacterium smegmatis str. MC2 155 succinyl-diaminopimelate desuccinylase YP_889352.1 5204819 R 246196 CDS YP_889353.1 118469582 4531456 5205921..5206865 1 NC_008596.1 tetrahydropicolinate succinylase 5206865 4531456 MSMEG_5104 Mycobacterium smegmatis str. MC2 155 tetrahydropicolinate succinylase YP_889353.1 5205921 D 246196 CDS YP_889354.1 118473354 4530830 complement(5206878..5207339) 1 NC_008596.1 hypothetical protein 5207339 4530830 MSMEG_5105 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889354.1 5206878 R 246196 CDS YP_889355.1 118470975 4531895 complement(5207358..5209097) 1 NC_008596.1 identified by match to protein family HMM PF01844; match to protein family HMM PF02720; HNH endonuclease 5209097 4531895 MSMEG_5106 Mycobacterium smegmatis str. MC2 155 HNH endonuclease YP_889355.1 5207358 R 246196 CDS YP_889356.1 118472724 4531694 5209320..5209718 1 NC_008596.1 hypothetical protein 5209718 4531694 MSMEG_5108 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889356.1 5209320 D 246196 CDS YP_889357.1 118470104 4534939 complement(5209709..5210374) 1 NC_008596.1 hypothetical protein 5210374 4534939 MSMEG_5107 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889357.1 5209709 R 246196 CDS YP_889358.1 118471530 4537241 complement(5210371..5211210) 1 NC_008596.1 hypothetical protein 5211210 4537241 MSMEG_5109 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889358.1 5210371 R 246196 CDS YP_889359.1 118471775 4536346 5212083..5212454 1 NC_008596.1 hypothetical protein 5212454 4536346 MSMEG_5111 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889359.1 5212083 D 246196 CDS YP_889360.1 118471007 4533500 5212470..5212793 1 NC_008596.1 hypothetical protein 5212793 4533500 MSMEG_5112 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889360.1 5212470 D 246196 CDS YP_889361.1 118467689 4537327 5212766..5213179 1 NC_008596.1 hypothetical protein 5213179 4537327 MSMEG_5115 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889361.1 5212766 D 246196 CDS YP_889362.1 118468796 4535314 complement(5213151..5214557) 1 NC_008596.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 5214557 4535314 MSMEG_5114 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_889362.1 5213151 R 246196 CDS YP_889363.1 118471406 4534882 5214644..5215138 1 NC_008596.1 identified by match to protein family HMM PF03745; hypothetical protein 5215138 4534882 MSMEG_5116 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889363.1 5214644 D 246196 CDS YP_889364.1 118473085 4533160 5215146..5215685 1 NC_008596.1 identified by match to protein family HMM PF00293; nudix hydrolase 5215685 4533160 MSMEG_5118 Mycobacterium smegmatis str. MC2 155 nudix hydrolase YP_889364.1 5215146 D 246196 CDS YP_889365.1 118467796 4535972 complement(5215682..5216635) 1 NC_008596.1 identified by match to protein family HMM PF01619; proline dehydrogenase 5216635 4535972 MSMEG_5117 Mycobacterium smegmatis str. MC2 155 proline dehydrogenase YP_889365.1 5215682 R 246196 CDS YP_889366.1 118469637 4534098 complement(5216637..5218265) 1 NC_008596.1 identified by match to protein family HMM PF00171; match to protein family HMM TIGR01236; 1-pyrroline-5-carboxylate dehydrogenase 5218265 pruA 4534098 pruA Mycobacterium smegmatis str. MC2 155 1-pyrroline-5-carboxylate dehydrogenase YP_889366.1 5216637 R 246196 CDS YP_889367.1 118471743 4536390 5218349..5219926 1 NC_008596.1 hypothetical protein 5219926 4536390 MSMEG_5120 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889367.1 5218349 D 246196 CDS YP_889368.1 118470667 4534676 complement(5219928..5221031) 1 NC_008596.1 catalyzes the formation of N-succinyl-LL-2,6-diaminopimelate from N-succinyl-L-2-amino-6-oxopimelate in lysine biosynthesis; N-succinyldiaminopimelate aminotransferase 5221031 4534676 MSMEG_5121 Mycobacterium smegmatis str. MC2 155 N-succinyldiaminopimelate aminotransferase YP_889368.1 5219928 R 246196 CDS YP_889369.1 118469543 4537117 complement(5221049..5221372) 1 NC_008596.1 identified by match to protein family HMM PF00037; ferredoxin 5221372 4537117 MSMEG_5122 Mycobacterium smegmatis str. MC2 155 ferredoxin YP_889369.1 5221049 R 246196 CDS YP_889370.1 118471664 4536463 5222843..5224858 1 NC_008596.1 identified by match to protein family HMM PF00070; match to protein family HMM PF00724; match to protein family HMM PF03486; match to protein family HMM PF07992; 2,4-dienoyl-CoA reductase 5224858 4536463 MSMEG_5124 Mycobacterium smegmatis str. MC2 155 2,4-dienoyl-CoA reductase YP_889370.1 5222843 D 246196 CDS YP_889371.1 118470252 4536771 complement(5224977..5225525) 1 NC_008596.1 identified by match to protein family HMM PF04264; hypothetical protein 5225525 4536771 MSMEG_5125 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889371.1 5224977 R 246196 CDS YP_889372.1 118469486 4534460 complement(5225815..5228439) 1 NC_008596.1 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; catalyzes radical-mediated transfer of hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); functions in F420 biosynthesis; FO synthase 5228439 fbiC 4534460 fbiC Mycobacterium smegmatis str. MC2 155 FO synthase YP_889372.1 5225815 R 246196 CDS YP_889373.1 118471361 4535268 5228643..5229797 1 NC_008596.1 hypothetical protein 5229797 4535268 MSMEG_5127 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889373.1 5228643 D 246196 CDS YP_889374.1 118472485 4532436 complement(5229798..5230202) 1 NC_008596.1 hypothetical protein 5230202 4532436 MSMEG_5128 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889374.1 5229798 R 246196 CDS YP_889375.1 118469462 4535725 complement(5230310..5231182) 1 NC_008596.1 identified by match to protein family HMM PF02585; N-acetyl-1-D-myo-Inosityl-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase MshB 5231182 4535725 MSMEG_5129 Mycobacterium smegmatis str. MC2 155 N-acetyl-1-D-myo-Inosityl-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase MshB YP_889375.1 5230310 R 246196 CDS YP_889376.1 118471180 4534966 complement(5231207..5233090) 1 NC_008596.1 identified by match to protein family HMM PF00496; extracellular solute-binding protein 5233090 4534966 MSMEG_5130 Mycobacterium smegmatis str. MC2 155 extracellular solute-binding protein YP_889376.1 5231207 R 246196 CDS YP_889377.1 118473886 4536581 5233598..5234785 1 NC_008596.1 hypothetical protein 5234785 4536581 MSMEG_5131 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889377.1 5233598 D 246196 CDS YP_889378.1 118473304 4535175 complement(5234873..5236774) 1 NC_008596.1 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA 5236774 typA 4535175 typA Mycobacterium smegmatis str. MC2 155 GTP-binding protein TypA YP_889378.1 5234873 R 246196 CDS YP_889379.1 118472729 4532357 5236721..5236834 1 NC_008596.1 hypothetical protein 5236834 4532357 MSMEG_5133 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889379.1 5236721 D 246196 CDS YP_889380.1 118468466 4537287 5236831..5236998 1 NC_008596.1 hypothetical protein 5236998 4537287 MSMEG_5134 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889380.1 5236831 D 246196 CDS YP_889381.1 118467486 4537004 5237084..5237347 1 NC_008596.1 hypothetical protein 5237347 4537004 MSMEG_5135 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889381.1 5237084 D 246196 CDS YP_889382.1 118469347 4533170 complement(5237353..5237805) 1 NC_008596.1 identified by match to protein family HMM PF01243; hypothetical protein 5237805 4533170 MSMEG_5136 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889382.1 5237353 R 246196 CDS YP_889383.1 118471246 4531522 complement(5237887..5238618) 1 NC_008596.1 identified by match to protein family HMM PF02665; match to protein family HMM TIGR00351; respiratory nitrate reductase subunit gamma 5238618 narI 4531522 narI Mycobacterium smegmatis str. MC2 155 respiratory nitrate reductase subunit gamma YP_889383.1 5237887 R 246196 CDS YP_889384.1 118467706 4537713 complement(5238618..5239256) 1 NC_008596.1 identified by match to protein family HMM PF02613; match to protein family HMM TIGR00684; nitrate reductase molybdenum cofactor assembly chaperone 5239256 narJ 4537713 narJ Mycobacterium smegmatis str. MC2 155 nitrate reductase molybdenum cofactor assembly chaperone YP_889384.1 5238618 R 246196 CDS YP_889385.1 118468429 4535587 complement(5239253..5240899) 1 NC_008596.1 identified by match to protein family HMM TIGR01660; nitrate reductase subunit beta 5240899 narH 4535587 narH Mycobacterium smegmatis str. MC2 155 nitrate reductase subunit beta YP_889385.1 5239253 R 246196 CDS YP_889386.1 118472993 4532273 complement(5240896..5244570) 1 NC_008596.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01580; nitrate reductase subunit alpha 5244570 4532273 MSMEG_5140 Mycobacterium smegmatis str. MC2 155 nitrate reductase subunit alpha YP_889386.1 5240896 R 246196 CDS YP_889387.1 118473248 4537308 complement(5244596..5245825) 1 NC_008596.1 identified by match to protein family HMM PF07690; nitrate/nitrite transporter 5245825 4537308 MSMEG_5141 Mycobacterium smegmatis str. MC2 155 nitrate/nitrite transporter YP_889387.1 5244596 R 246196 CDS YP_889388.1 118469146 4532563 complement(5245838..5247265) 1 NC_008596.1 identified by match to protein family HMM PF00232; beta-glucosidase A 5247265 4532563 MSMEG_5142 Mycobacterium smegmatis str. MC2 155 beta-glucosidase A YP_889388.1 5245838 R 246196 CDS YP_889389.1 118468575 4532702 complement(5247286..5248347) 1 NC_008596.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; HTH-type transcriptional regulator DegA 5248347 4532702 MSMEG_5143 Mycobacterium smegmatis str. MC2 155 HTH-type transcriptional regulator DegA YP_889389.1 5247286 R 246196 CDS YP_889390.1 118468598 4532377 complement(5248344..5250791) 1 NC_008596.1 identified by match to protein family HMM PF00933; match to protein family HMM PF01915; xylosidase/arabinosidase 5250791 4532377 MSMEG_5144 Mycobacterium smegmatis str. MC2 155 xylosidase/arabinosidase YP_889390.1 5248344 R 246196 CDS YP_889391.1 118467646 4534994 5251100..5252485 1 NC_008596.1 identified by match to protein family HMM PF01547; extracellular solute-binding protein 5252485 4534994 MSMEG_5145 Mycobacterium smegmatis str. MC2 155 extracellular solute-binding protein YP_889391.1 5251100 D 246196 CDS YP_889392.1 118473093 4531154 5252482..5253402 1 NC_008596.1 identified by match to protein family HMM PF00528; binding protein dependent transporter 5253402 4531154 MSMEG_5146 Mycobacterium smegmatis str. MC2 155 binding protein dependent transporter YP_889392.1 5252482 D 246196 CDS YP_889393.1 118472390 4531800 5253404..5254303 1 NC_008596.1 identified by match to protein family HMM PF00528; sugar ABC transporter transmembrane protein 5254303 4531800 MSMEG_5147 Mycobacterium smegmatis str. MC2 155 sugar ABC transporter transmembrane protein YP_889393.1 5253404 D 246196 CDS YP_889394.1 118471416 4532799 complement(5254309..5254701) 1 NC_008596.1 identified by match to protein family HMM PF00293; CTP pyrophosphohydrolase 5254701 4532799 MSMEG_5148 Mycobacterium smegmatis str. MC2 155 CTP pyrophosphohydrolase YP_889394.1 5254309 R 246196 CDS YP_889395.1 118470021 4531636 5254729..5255013 1 NC_008596.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 5255013 phhB 4531636 phhB Mycobacterium smegmatis str. MC2 155 pterin-4-alpha-carbinolamine dehydratase YP_889395.1 5254729 D 246196 CDS YP_889396.1 118473316 4530975 complement(5254991..5256124) 1 NC_008596.1 involved in the fifth mannose transfer of phosphatidylinositol mannoside synthesis; mannosyltransferase 5256124 pimE 4530975 pimE Mycobacterium smegmatis str. MC2 155 mannosyltransferase YP_889396.1 5254991 R 246196 CDS YP_889397.1 118472580 4534359 5256259..5256948 1 NC_008596.1 hypothetical protein 5256948 4534359 MSMEG_5152 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889397.1 5256259 D 246196 CDS YP_889398.1 118473589 4534862 5256323..5256931 1 NC_008596.1 hypothetical protein 5256931 4534862 MSMEG_5151 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889398.1 5256323 D 246196 CDS YP_889399.1 118471807 4536339 5256973..5257956 1 NC_008596.1 hypothetical protein 5257956 4536339 MSMEG_5153 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889399.1 5256973 D 246196 CDS YP_889400.1 118472912 4533781 complement(5258052..5258201) 1 NC_008596.1 hypothetical protein 5258201 4533781 MSMEG_5154 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889400.1 5258052 R 246196 CDS YP_889401.1 118472584 4534365 5258247..5258900 1 NC_008596.1 identified by match to protein family HMM PF00881; nitroreductase 5258900 4534365 MSMEG_5155 Mycobacterium smegmatis str. MC2 155 nitroreductase YP_889401.1 5258247 D 246196 CDS YP_889402.1 118473268 4537698 complement(5258919..5259500) 1 NC_008596.1 identified by match to protein family HMM PF00730; base excision DNA repair protein, HhH-GPD family protein 5259500 4537698 MSMEG_5156 Mycobacterium smegmatis str. MC2 155 base excision DNA repair protein, HhH-GPD family protein YP_889402.1 5258919 R 246196 CDS YP_889403.1 118470187 4530822 5259594..5259890 1 NC_008596.1 hypothetical protein 5259890 4530822 MSMEG_5157 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889403.1 5259594 D 246196 CDS YP_889404.1 118471141 4531828 5259912..5261111 1 NC_008596.1 identified by similarity to GB:AAB48182.1; match to protein family HMM PF02518; match to protein family HMM PF06580; sensor histidine kinase 5261111 4531828 MSMEG_5158 Mycobacterium smegmatis str. MC2 155 sensor histidine kinase YP_889404.1 5259912 D 246196 CDS YP_889405.1 118471360 4535267 5261108..5261893 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF04397; DNA-binding response regulator 5261893 4535267 MSMEG_5159 Mycobacterium smegmatis str. MC2 155 DNA-binding response regulator YP_889405.1 5261108 D 246196 CDS YP_889406.1 118473020 4532341 5261949..5262260 1 NC_008596.1 integral membrane protein 5262260 4532341 MSMEG_5160 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_889406.1 5261949 D 246196 CDS YP_889407.1 118468845 4535618 5262257..5263999 1 NC_008596.1 identified by match to protein family HMM PF00474; transmembrane transporter 5263999 4535618 MSMEG_5161 Mycobacterium smegmatis str. MC2 155 transmembrane transporter YP_889407.1 5262257 D 246196 CDS YP_889408.1 118468140 4532683 complement(5264003..5264395) 1 NC_008596.1 identified by match to protein family HMM PF01638; cinnamoyl ester hydrolase 5264395 4532683 MSMEG_5162 Mycobacterium smegmatis str. MC2 155 cinnamoyl ester hydrolase YP_889408.1 5264003 R 246196 CDS YP_889409.1 118472753 4531942 5264488..5265240 1 NC_008596.1 identified by match to protein family HMM PF04069; glycine/betaine ABC transporter periplasmic protein 5265240 4531942 MSMEG_5163 Mycobacterium smegmatis str. MC2 155 glycine/betaine ABC transporter periplasmic protein YP_889409.1 5264488 D 246196 CDS YP_889410.1 118467954 4532065 5265330..5266328 1 NC_008596.1 identified by match to protein family HMM PF00107; match to protein family HMM TIGR02817; zinc-binding alcohol dehydrogenase 5266328 4532065 MSMEG_5164 Mycobacterium smegmatis str. MC2 155 zinc-binding alcohol dehydrogenase YP_889410.1 5265330 D 246196 CDS YP_889411.1 118468665 4535241 5266487..5266834 1 NC_008596.1 identified by match to protein family HMM PF04341; integral membrane protein 5266834 4535241 MSMEG_5165 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_889411.1 5266487 D 246196 CDS YP_889412.1 118470658 4534667 5266831..5268462 1 NC_008596.1 identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813; Na+/solute symporter 5268462 4534667 MSMEG_5166 Mycobacterium smegmatis str. MC2 155 Na+/solute symporter YP_889412.1 5266831 D 246196 CDS YP_889413.1 118470255 4537146 5268527..5269732 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily protein 5269732 4537146 MSMEG_5167 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_889413.1 5268527 D 246196 CDS YP_889414.1 118470935 4533983 5269784..5271097 1 NC_008596.1 hypothetical protein 5271097 4533983 MSMEG_5168 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889414.1 5269784 D 246196 CDS YP_889415.1 118472026 4534106 complement(5271099..5271269) 1 NC_008596.1 hypothetical protein 5271269 4534106 MSMEG_5169 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889415.1 5271099 R 246196 CDS YP_889416.1 118470760 4533663 complement(5271288..5271731) 1 NC_008596.1 identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 5271731 4533663 MSMEG_5170 Mycobacterium smegmatis str. MC2 155 pyridoxamine 5'-phosphate oxidase YP_889416.1 5271288 R 246196 CDS YP_889417.1 118473433 4534124 5271798..5272811 1 NC_008596.1 hypothetical protein 5272811 4534124 MSMEG_5171 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889417.1 5271798 D 246196 CDS YP_889418.1 118470131 4534502 5272831..5273346 1 NC_008596.1 identified by match to protein family HMM PF08002; hypothetical protein 5273346 4534502 MSMEG_5172 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889418.1 5272831 D 246196 CDS YP_889419.1 118468855 4535628 5273370..5274206 1 NC_008596.1 identified by match to protein family HMM PF02409; O-methyltransferase 5274206 4535628 MSMEG_5173 Mycobacterium smegmatis str. MC2 155 O-methyltransferase YP_889419.1 5273370 D 246196 CDS YP_889420.1 118468112 4535610 complement(5274219..5274575) 1 NC_008596.1 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 5274575 4535610 MSMEG_5174 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_889420.1 5274219 R 246196 CDS YP_889421.1 118470343 4534926 5274659..5275381 1 NC_008596.1 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 5275381 4534926 MSMEG_5175 Mycobacterium smegmatis str. MC2 155 NAD-dependent deacetylase YP_889421.1 5274659 D 246196 CDS YP_889422.1 118471862 4536277 complement(5275385..5276035) 1 NC_008596.1 methyltransferase type 11 5276035 4536277 MSMEG_5176 Mycobacterium smegmatis str. MC2 155 methyltransferase type 11 YP_889422.1 5275385 R 246196 CDS YP_889423.1 118468928 4537462 complement(5276022..5276741) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5276741 4537462 MSMEG_5177 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889423.1 5276022 R 246196 CDS YP_889424.1 118472917 4533786 complement(5276743..5279016) 1 NC_008596.1 integral membrane protein 5279016 4533786 MSMEG_5178 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_889424.1 5276743 R 246196 CDS YP_889425.1 118468601 4532381 5279234..5279794 1 NC_008596.1 identified by match to protein family HMM PF07681; DoxX subfamily protein 5279794 4532381 MSMEG_5179 Mycobacterium smegmatis str. MC2 155 DoxX subfamily protein YP_889425.1 5279234 D 246196 CDS YP_889426.1 118470655 4534664 5279899..5280030 1 NC_008596.1 hypothetical protein 5280030 4534664 MSMEG_5180 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889426.1 5279899 D 246196 CDS YP_889427.1 118473338 4532003 complement(5280066..5281532) 1 NC_008596.1 identified by similarity to GP:2935133; match to protein family HMM PF01609; IS1549, transposase 5281532 4532003 MSMEG_5181 Mycobacterium smegmatis str. MC2 155 IS1549, transposase YP_889427.1 5280066 R 246196 CDS YP_889428.1 118471618 4536531 complement(5281804..5282817) 1 NC_008596.1 identified by match to protein family HMM PF03060; 2-nitropropane dioxygenase 5282817 4536531 MSMEG_5182 Mycobacterium smegmatis str. MC2 155 2-nitropropane dioxygenase YP_889428.1 5281804 R 246196 CDS YP_889429.1 118468032 4531389 complement(5282834..5283595) 1 NC_008596.1 identified by match to protein family HMM PF00106; 3-hydroxyacyl-CoA dehydrogenase 5283595 4531389 MSMEG_5183 Mycobacterium smegmatis str. MC2 155 3-hydroxyacyl-CoA dehydrogenase YP_889429.1 5282834 R 246196 CDS YP_889430.1 118473757 4537733 complement(5283647..5284738) 1 NC_008596.1 identified by match to protein family HMM PF02515; alpha-methylacyl-CoA racemase 5284738 4537733 MSMEG_5184 Mycobacterium smegmatis str. MC2 155 alpha-methylacyl-CoA racemase YP_889430.1 5283647 R 246196 CDS YP_889431.1 118473011 4531303 5284871..5285698 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 5285698 4531303 MSMEG_5185 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_889431.1 5284871 D 246196 CDS YP_889432.1 118471533 4537613 complement(5285867..5286256) 1 NC_008596.1 identified by match to protein family HMM PF05534; HicB family protein 5286256 4537613 MSMEG_5186 Mycobacterium smegmatis str. MC2 155 HicB family protein YP_889432.1 5285867 R 246196 CDS YP_889433.1 118472247 4532468 5286339..5287598 1 NC_008596.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00900; tetracycline-resistance determinant TetV 5287598 4532468 MSMEG_5187 Mycobacterium smegmatis str. MC2 155 tetracycline-resistance determinant TetV YP_889433.1 5286339 D 246196 CDS YP_889434.1 118467420 4536036 complement(5287602..5288285) 1 NC_008596.1 identified by match to protein family HMM PF02517; caax amino protease 5288285 4536036 MSMEG_5188 Mycobacterium smegmatis str. MC2 155 caax amino protease YP_889434.1 5287602 R 246196 CDS YP_889435.1 118471768 4536377 complement(5288282..5289418) 1 NC_008596.1 identified by match to protein family HMM PF01370; match to protein family HMM PF05368; oxidoreductase 5289418 4536377 MSMEG_5189 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_889435.1 5288282 R 246196 CDS YP_889436.1 118473516 4533878 complement(5289428..5290024) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5290024 4533878 MSMEG_5190 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889436.1 5289428 R 246196 CDS YP_889437.1 118471276 4532150 5290103..5291140 1 NC_008596.1 identified by match to protein family HMM PF00248; aldo/keto reductase 5291140 4532150 MSMEG_5192 Mycobacterium smegmatis str. MC2 155 aldo/keto reductase YP_889437.1 5290103 D 246196 CDS YP_889438.1 118470171 4534349 complement(5291112..5291633) 1 NC_008596.1 identified by match to protein family HMM PF00132; siderophore binding protein 5291633 4534349 MSMEG_5191 Mycobacterium smegmatis str. MC2 155 siderophore binding protein YP_889438.1 5291112 R 246196 CDS YP_889439.1 118469033 4530885 complement(5291664..5292626) 1 NC_008596.1 identified by match to protein family HMM PF00165; match to protein family HMM PF01965; AraC family transcriptional regulator 5292626 4530885 MSMEG_5193 Mycobacterium smegmatis str. MC2 155 AraC family transcriptional regulator YP_889439.1 5291664 R 246196 CDS YP_889440.1 118472500 4533730 5292709..5294022 1 NC_008596.1 identified by match to protein family HMM PF07690; integral membrane protein 5294022 4533730 MSMEG_5194 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_889440.1 5292709 D 246196 CDS YP_889441.1 118469670 4535432 complement(5294026..5294169) 1 NC_008596.1 hypothetical protein 5294169 4535432 MSMEG_5195 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889441.1 5294026 R 246196 CDS YP_889442.1 118472330 4534221 5294168..5294923 1 NC_008596.1 identified by match to protein family HMM PF02469; fasciclin domain-containing protein 5294923 4534221 MSMEG_5196 Mycobacterium smegmatis str. MC2 155 fasciclin domain-containing protein YP_889442.1 5294168 D 246196 CDS YP_889443.1 118469937 4535848 complement(5294997..5296139) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; long-chain specific acyl-CoA dehydrogenase 5296139 4535848 MSMEG_5197 Mycobacterium smegmatis str. MC2 155 long-chain specific acyl-CoA dehydrogenase YP_889443.1 5294997 R 246196 CDS YP_889444.1 118469252 4531544 complement(5296145..5296939) 1 NC_008596.1 identified by match to protein family HMM PF00378; carnitinyl-CoA dehydratase 5296939 4531544 MSMEG_5198 Mycobacterium smegmatis str. MC2 155 carnitinyl-CoA dehydratase YP_889444.1 5296145 R 246196 CDS YP_889445.1 118470260 4537152 complement(5296936..5298093) 1 NC_008596.1 identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; acyl-CoA dehydrogenase 5298093 4537152 MSMEG_5199 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_889445.1 5296936 R 246196 CDS YP_889446.1 118469308 4533373 5298285..5299076 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 5299076 4533373 MSMEG_5201 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_889446.1 5298285 D 246196 CDS YP_889447.1 118467477 4536995 complement(5299073..5299366) 1 NC_008596.1 hypothetical protein 5299366 4536995 MSMEG_5200 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889447.1 5299073 R 246196 CDS YP_889448.1 118472311 4532899 complement(5299440..5301194) 1 NC_008596.1 hypothetical protein 5301194 4532899 MSMEG_5202 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889448.1 5299440 R 246196 CDS YP_889449.1 118471969 4536154 complement(5301228..5301752) 1 NC_008596.1 identified by match to protein family HMM PF07681; DoxX subfamily protein 5301752 4536154 MSMEG_5203 Mycobacterium smegmatis str. MC2 155 DoxX subfamily protein YP_889449.1 5301228 R 246196 CDS YP_889450.1 118471414 4534891 complement(5301775..5302539) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF07993; oxidoreductase, short chain dehydrogenase/reductase 5302539 4534891 MSMEG_5204 Mycobacterium smegmatis str. MC2 155 oxidoreductase, short chain dehydrogenase/reductase YP_889450.1 5301775 R 246196 CDS YP_889451.1 118471994 4536141 5302564..5303166 1 NC_008596.1 identified by match to protein family HMM PF00440; regulatory protein 5303166 4536141 MSMEG_5206 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_889451.1 5302564 D 246196 CDS YP_889452.1 118471269 4532143 complement(5303163..5304428) 1 NC_008596.1 hypothetical protein 5304428 4532143 MSMEG_5205 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889452.1 5303163 R 246196 CDS YP_889453.1 118473894 4536589 complement(5304455..5305150) 1 NC_008596.1 hypothetical protein 5305150 4536589 MSMEG_5207 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889453.1 5304455 R 246196 CDS YP_889454.1 118473172 4532574 complement(5305147..5305725) 1 NC_008596.1 hypothetical protein 5305725 4532574 MSMEG_5208 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889454.1 5305147 R 246196 CDS YP_889455.1 118472012 4533613 5305945..5306808 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 5306808 4533613 MSMEG_5209 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_889455.1 5305945 D 246196 CDS YP_889456.1 118473470 4531172 5306805..5309738 1 NC_008596.1 identified by match to protein family HMM PF00202; match to protein family HMM PF01636; hypothetical protein 5309738 4531172 MSMEG_5211 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889456.1 5306805 D 246196 CDS YP_889457.1 118467889 4535265 complement(5309722..5310480) 1 NC_008596.1 identified by match to protein family HMM PF00561; hydrolase 5310480 4535265 MSMEG_5210 Mycobacterium smegmatis str. MC2 155 hydrolase YP_889457.1 5309722 R 246196 CDS YP_889458.1 118473446 4534137 complement(5310644..5310811) 1 NC_008596.1 hypothetical protein 5310811 4534137 MSMEG_5212 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889458.1 5310644 R 246196 CDS YP_889459.1 118470715 4533930 5310853..5311533 1 NC_008596.1 hypothetical protein 5311533 4533930 MSMEG_5213 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889459.1 5310853 D 246196 CDS YP_889460.1 118473538 4533638 5311646..5312170 1 NC_008596.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase sigma-70 factor 5312170 4533638 MSMEG_5214 Mycobacterium smegmatis str. MC2 155 RNA polymerase sigma-70 factor YP_889460.1 5311646 D 246196 CDS YP_889461.1 118470414 4534187 5312196..5312690 1 NC_008596.1 identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 5312690 4534187 MSMEG_5215 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889461.1 5312196 D 246196 CDS YP_889462.1 118472665 4535085 complement(5312778..5313185) 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase 5313185 4535085 MSMEG_5216 Mycobacterium smegmatis str. MC2 155 glyoxalase YP_889462.1 5312778 R 246196 CDS YP_889463.1 118473012 4531304 complement(5313276..5313614) 1 NC_008596.1 hypothetical protein 5313614 4531304 MSMEG_5217 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889463.1 5313276 R 246196 CDS YP_889464.1 118470918 4533966 complement(5313647..5314048) 1 NC_008596.1 identified by match to protein family HMM PF07366; hypothetical protein 5314048 4533966 MSMEG_5218 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889464.1 5313647 R 246196 CDS YP_889465.1 118471960 4536184 complement(5314122..5314679) 1 NC_008596.1 identified by match to protein family HMM PF01872; riboflavin biosynthesis protein RibD domain-containing protein 5314679 4536184 MSMEG_5219 Mycobacterium smegmatis str. MC2 155 riboflavin biosynthesis protein RibD domain-containing protein YP_889465.1 5314122 R 246196 CDS YP_889466.1 118469106 4535299 complement(5314772..5315719) 1 NC_008596.1 identified by match to protein family HMM PF07859; esterase/lipase/thioesterase 5315719 4535299 MSMEG_5220 Mycobacterium smegmatis str. MC2 155 esterase/lipase/thioesterase YP_889466.1 5314772 R 246196 CDS YP_889467.1 118470073 4535966 complement(5315767..5316321) 1 NC_008596.1 identified by match to protein family HMM PF00583; N-acetyltransferase GCN5 5316321 4535966 MSMEG_5221 Mycobacterium smegmatis str. MC2 155 N-acetyltransferase GCN5 YP_889467.1 5315767 R 246196 CDS YP_889468.1 118472879 4534022 complement(5316318..5317424) 1 NC_008596.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 5317424 ychF 4534022 ychF Mycobacterium smegmatis str. MC2 155 GTP-dependent nucleic acid-binding protein EngD YP_889468.1 5316318 R 246196 CDS YP_889469.1 118472676 4532941 5317578..5318684 1 NC_008596.1 hypothetical protein 5318684 4532941 MSMEG_5223 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889469.1 5317578 D 246196 CDS YP_889470.1 118473320 4530979 complement(5318699..5319643) 1 NC_008596.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 5319643 ispH 4530979 ispH Mycobacterium smegmatis str. MC2 155 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_889470.1 5318699 R 246196 CDS YP_889471.1 118472437 4532054 5319766..5320383 1 NC_008596.1 hypothetical protein 5320383 4532054 MSMEG_5225 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889471.1 5319766 D 246196 CDS YP_889472.1 118471910 4536211 5320419..5321633 1 NC_008596.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 5321633 xseA 4536211 xseA Mycobacterium smegmatis str. MC2 155 exodeoxyribonuclease VII large subunit YP_889472.1 5320419 D 246196 CDS YP_889473.1 118470322 4535200 5321630..5321842 1 NC_008596.1 identified by match to protein family HMM PF02609; match to protein family HMM TIGR01280; exodeoxyribonuclease VII small subunit 5321842 xseB 4535200 xseB Mycobacterium smegmatis str. MC2 155 exodeoxyribonuclease VII small subunit YP_889473.1 5321630 D 246196 CDS YP_889474.1 118469383 4532277 5321905..5322975 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; 3-beta hydroxysteroid dehydrogenase/isomerase 5322975 4532277 MSMEG_5228 Mycobacterium smegmatis str. MC2 155 3-beta hydroxysteroid dehydrogenase/isomerase YP_889474.1 5321905 D 246196 CDS YP_889475.1 118469675 4535437 complement(5322977..5323501) 1 NC_008596.1 hypothetical protein 5323501 4535437 MSMEG_5229 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889475.1 5322977 R 246196 CDS YP_889476.1 118471494 4536833 complement(5323505..5323840) 1 NC_008596.1 hypothetical protein 5323840 4536833 MSMEG_5230 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889476.1 5323505 R 246196 CDS YP_889477.1 118473655 4533524 complement(5323876..5324085) 1 NC_008596.1 hypothetical protein 5324085 4533524 MSMEG_5231 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889477.1 5323876 R 246196 CDS YP_889478.1 118473154 4532595 complement(5324361..5324507) 1 NC_008596.1 hypothetical protein 5324507 4532595 MSMEG_5232 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889478.1 5324361 R 246196 CDS YP_889479.1 118468303 4533061 5324552..5325631 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; RmlD substrate binding domain-containing protein 5325631 4533061 MSMEG_5233 Mycobacterium smegmatis str. MC2 155 RmlD substrate binding domain-containing protein YP_889479.1 5324552 D 246196 CDS YP_889480.1 118470295 4533353 5325628..5326398 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short-chain dehydrogenase/reductase SDR 5326398 4533353 MSMEG_5234 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase SDR YP_889480.1 5325628 D 246196 CDS YP_889481.1 118469499 4533326 5326395..5327228 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 5327228 4533326 MSMEG_5235 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_889481.1 5326395 D 246196 CDS YP_889482.1 118468766 4534255 5327291..5328478 1 NC_008596.1 identified by match to protein family HMM PF01594; hypothetical protein 5328478 4534255 MSMEG_5237 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889482.1 5327291 D 246196 CDS YP_889483.1 118470879 4537184 complement(5328456..5329280) 1 NC_008596.1 identified by match to protein family HMM PF01738; dienelactone hydrolase 5329280 4537184 MSMEG_5236 Mycobacterium smegmatis str. MC2 155 dienelactone hydrolase YP_889483.1 5328456 R 246196 CDS YP_889484.1 118472379 4534769 complement(5329295..5329918) 1 NC_008596.1 hypothetical protein 5329918 4534769 MSMEG_5238 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889484.1 5329295 R 246196 CDS YP_889485.1 118471565 4532213 5329974..5331002 1 NC_008596.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 5331002 glpX 4532213 glpX Mycobacterium smegmatis str. MC2 155 fructose 1,6-bisphosphatase II YP_889485.1 5329974 D 246196 CDS YP_889486.1 118472968 4532307 5331034..5332440 1 NC_008596.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 5332440 fumC 4532307 fumC Mycobacterium smegmatis str. MC2 155 fumarate hydratase YP_889486.1 5331034 D 246196 CDS YP_889487.1 118468427 4535585 complement(5332463..5334178) 1 NC_008596.1 identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730; GAF family protein 5334178 4535585 MSMEG_5241 Mycobacterium smegmatis str. MC2 155 GAF family protein YP_889487.1 5332463 R 246196 CDS YP_889488.1 118467649 4534997 complement(5334246..5335652) 1 NC_008596.1 identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; acyltransferase 5335652 4534997 MSMEG_5242 Mycobacterium smegmatis str. MC2 155 acyltransferase YP_889488.1 5334246 R 246196 CDS YP_889489.1 118470852 4534307 complement(5335649..5336092) 1 NC_008596.1 hypothetical protein 5336092 4534307 MSMEG_5243 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889489.1 5335649 R 246196 CDS YP_889490.1 118472166 4535692 complement(5336164..5336799) 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; DevR family transcriptional regulator 5336799 4535692 MSMEG_5244 Mycobacterium smegmatis str. MC2 155 DevR family transcriptional regulator YP_889490.1 5336164 R 246196 CDS YP_889491.1 118469548 4537123 complement(5336810..5337652) 1 NC_008596.1 identified by match to protein family HMM PF00582; universal stress protein family protein 5337652 4537123 MSMEG_5245 Mycobacterium smegmatis str. MC2 155 universal stress protein family protein YP_889491.1 5336810 R 246196 CDS YP_889492.1 118472552 4532679 complement(5337654..5338643) 1 NC_008596.1 hypothetical protein 5338643 4532679 MSMEG_5246 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889492.1 5337654 R 246196 CDS YP_889493.1 118473775 4535132 complement(5338763..5340076) 1 NC_008596.1 identified by match to protein family HMM PF02562; PhoH family protein 5340076 4535132 MSMEG_5247 Mycobacterium smegmatis str. MC2 155 PhoH family protein YP_889493.1 5338763 R 246196 CDS YP_889494.1 118473013 4532334 complement(5340381..5341208) 1 NC_008596.1 identified by match to protein family HMM PF03405; acyl-[ACP] desaturase 5341208 4532334 MSMEG_5248 Mycobacterium smegmatis str. MC2 155 acyl-[ACP] desaturase YP_889494.1 5340381 R 246196 CDS YP_889495.1 118468818 4534074 complement(5341287..5342759) 1 NC_008596.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 5342759 glyA 4534074 glyA Mycobacterium smegmatis str. MC2 155 serine hydroxymethyltransferase YP_889495.1 5341287 R 246196 CDS YP_889496.1 118469162 4534748 complement(5342839..5344104) 1 NC_008596.1 CalR9 protein 5344104 4534748 MSMEG_5250 Mycobacterium smegmatis str. MC2 155 CalR9 protein YP_889496.1 5342839 R 246196 CDS YP_889497.1 118469672 4535434 5344147..5345085 1 NC_008596.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 5345085 coaA 4535434 coaA Mycobacterium smegmatis str. MC2 155 pantothenate kinase YP_889497.1 5344147 D 246196 CDS YP_889498.1 118468026 4531383 complement(5345057..5346574) 1 NC_008596.1 hypothetical protein 5346574 4531383 MSMEG_5251 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889498.1 5345057 R 246196 CDS YP_889499.1 118467466 4536611 complement(5346674..5347081) 1 NC_008596.1 hypothetical protein 5347081 4536611 MSMEG_5253 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889499.1 5346674 R 246196 CDS YP_889500.1 118471136 4531823 complement(5347134..5347541) 1 NC_008596.1 hypothetical protein 5347541 4531823 MSMEG_5254 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889500.1 5347134 R 246196 CDS YP_889501.1 118469729 4537604 complement(5347702..5349066) 1 NC_008596.1 hypothetical protein 5349066 4537604 MSMEG_5255 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889501.1 5347702 R 246196 CDS YP_889502.1 118468157 4532700 complement(5349086..5349877) 1 NC_008596.1 identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; UDP diphosphate synthase 5349877 uppS 4532700 uppS Mycobacterium smegmatis str. MC2 155 UDP diphosphate synthase YP_889502.1 5349086 R 246196 CDS YP_889503.1 118472546 4532673 5349936..5350706 1 NC_008596.1 identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065; hemolysin III family channel protein 5350706 4532673 MSMEG_5257 Mycobacterium smegmatis str. MC2 155 hemolysin III family channel protein YP_889503.1 5349936 D 246196 CDS YP_889504.1 118471742 4536389 complement(5350825..5351199) 1 NC_008596.1 identified by match to protein family HMM PF02136; steroid delta-isomerase 5351199 4536389 MSMEG_5258 Mycobacterium smegmatis str. MC2 155 steroid delta-isomerase YP_889504.1 5350825 R 246196 CDS YP_889505.1 118469161 4534747 complement(5351211..5353184) 1 NC_008596.1 identified by match to protein family HMM PF03190; hypothetical protein 5353184 4534747 MSMEG_5259 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889505.1 5351211 R 246196 CDS YP_889506.1 118467683 4537321 complement(5353204..5353482) 1 NC_008596.1 hypothetical protein 5353482 4537321 MSMEG_5260 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889506.1 5353204 R 246196 CDS YP_889507.1 118472860 4531344 complement(5353479..5354345) 1 NC_008596.1 identified by match to protein family HMM PF02585; mycothiol conjugate amidase Mca 5354345 4531344 MSMEG_5261 Mycobacterium smegmatis str. MC2 155 mycothiol conjugate amidase Mca YP_889507.1 5353479 R 246196 CDS YP_889508.1 118472280 4534806 5354473..5354901 1 NC_008596.1 hypothetical protein 5354901 4534806 MSMEG_5262 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889508.1 5354473 D 246196 CDS YP_889509.1 118469204 4535793 5355102..5355596 1 NC_008596.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 5355596 greA 4535793 greA Mycobacterium smegmatis str. MC2 155 transcription elongation factor GreA YP_889509.1 5355102 D 246196 CDS YP_889510.1 118469886 4533205 5355634..5356314 1 NC_008596.1 hypothetical protein 5356314 4533205 MSMEG_5264 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889510.1 5355634 D 246196 CDS YP_889511.1 118467584 4532874 complement(5356323..5357477) 1 NC_008596.1 catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; cystathionine gamma-synthase 5357477 4532874 MSMEG_5265 Mycobacterium smegmatis str. MC2 155 cystathionine gamma-synthase YP_889511.1 5356323 R 246196 CDS YP_889512.1 118470934 4533982 5357517..5358707 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; glutaryl-CoA dehydrogenase 5358707 4533982 MSMEG_5267 Mycobacterium smegmatis str. MC2 155 glutaryl-CoA dehydrogenase YP_889512.1 5357517 D 246196 CDS YP_889513.1 118470060 4535953 complement(5358691..5359428) 1 NC_008596.1 identified by match to protein family HMM PF06271; RDD family protein 5359428 4535953 MSMEG_5266 Mycobacterium smegmatis str. MC2 155 RDD family protein YP_889513.1 5358691 R 246196 CDS YP_889514.1 118468565 4533699 complement(5359516..5360649) 1 NC_008596.1 hypothetical protein 5360649 4533699 MSMEG_5268 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889514.1 5359516 R 246196 CDS YP_889515.1 118470840 4532527 5360191..5360676 1 NC_008596.1 hypothetical protein 5360676 4532527 MSMEG_5269 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889515.1 5360191 D 246196 CDS YP_889516.1 118472959 4532297 complement(5360957..5362348) 1 NC_008596.1 identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137; cystathionine beta-synthase 5362348 4532297 MSMEG_5270 Mycobacterium smegmatis str. MC2 155 cystathionine beta-synthase YP_889516.1 5360957 R 246196 CDS YP_889517.1 118472036 4534118 complement(5362378..5363424) 1 NC_008596.1 identified by match to protein family HMM PF07859; esterase 5363424 4534118 MSMEG_5271 Mycobacterium smegmatis str. MC2 155 esterase YP_889517.1 5362378 R 246196 CDS YP_889518.1 118471309 4534649 5363628..5364581 1 NC_008596.1 identified by match to protein family HMM PF00657; hypothetical protein 5364581 4534649 MSMEG_5272 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889518.1 5363628 D 246196 CDS YP_889519.1 118467515 4535526 5364613..5365830 1 NC_008596.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 5365830 4535526 MSMEG_5273 Mycobacterium smegmatis str. MC2 155 acetyl-CoA acetyltransferase YP_889519.1 5364613 D 246196 CDS YP_889520.1 118473801 4531280 5365924..5367126 1 NC_008596.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 5367126 purT 4531280 purT Mycobacterium smegmatis str. MC2 155 phosphoribosylglycinamide formyltransferase 2 YP_889520.1 5365924 D 246196 CDS YP_889521.1 118470477 4536788 complement(5367202..5368038) 1 NC_008596.1 identified by match to protein family HMM PF06539; permease of the major facilitator superfamily protein 5368038 4536788 MSMEG_5275 Mycobacterium smegmatis str. MC2 155 permease of the major facilitator superfamily protein YP_889521.1 5367202 R 246196 CDS YP_889522.1 118470071 4535964 5368214..5369260 1 NC_008596.1 catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 5369260 4535964 MSMEG_5276 Mycobacterium smegmatis str. MC2 155 3-hydroxyisobutyryl-CoA hydrolase YP_889522.1 5368214 D 246196 CDS YP_889523.1 118467702 4537709 5369260..5370036 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 5370036 4537709 MSMEG_5277 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_889523.1 5369260 D 246196 CDS YP_889524.1 118467856 4532878 5370047..5371777 1 NC_008596.1 transmembrane protein 5371777 4532878 MSMEG_5278 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_889524.1 5370047 D 246196 CDS YP_889525.1 118469554 4537500 complement(5371788..5372156) 1 NC_008596.1 hypothetical protein 5372156 4537500 MSMEG_5279 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889525.1 5371788 R 246196 CDS YP_889526.1 118468952 4532615 complement(5372158..5372706) 1 NC_008596.1 identified by match to protein family HMM PF05995; cysteine dioxygenase type I 5372706 4532615 MSMEG_5280 Mycobacterium smegmatis str. MC2 155 cysteine dioxygenase type I YP_889526.1 5372158 R 246196 CDS YP_889527.1 118473319 4530978 5372831..5373301 1 NC_008596.1 LpqV protein 5373301 4530978 MSMEG_5281 Mycobacterium smegmatis str. MC2 155 LpqV protein YP_889527.1 5372831 D 246196 CDS YP_889528.1 118467564 4535518 complement(5373318..5373962) 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 5373962 4535518 MSMEG_5282 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_889528.1 5373318 R 246196 CDS YP_889529.1 118469954 4530917 5374065..5375750 1 NC_008596.1 identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976; hydrolase, CocE/NonD family protein 5375750 4530917 MSMEG_5283 Mycobacterium smegmatis str. MC2 155 hydrolase, CocE/NonD family protein YP_889529.1 5374065 D 246196 CDS YP_889530.1 118470394 4533455 5375747..5376769 1 NC_008596.1 identified by match to protein family HMM PF01734; patatin 5376769 4533455 MSMEG_5284 Mycobacterium smegmatis str. MC2 155 patatin YP_889530.1 5375747 D 246196 CDS YP_889531.1 118472345 4534236 complement(5376770..5377642) 1 NC_008596.1 identified by match to protein family HMM PF01734; phospholipase 5377642 4534236 MSMEG_5285 Mycobacterium smegmatis str. MC2 155 phospholipase YP_889531.1 5376770 R 246196 CDS YP_889532.1 118469270 4532240 5377718..5378761 1 NC_008596.1 identified by match to protein family HMM PF00107; dehydrogenase 5378761 4532240 MSMEG_5287 Mycobacterium smegmatis str. MC2 155 dehydrogenase YP_889532.1 5377718 D 246196 CDS YP_889533.1 118467905 4531261 complement(5378758..5379807) 1 NC_008596.1 identified by match to protein family HMM PF01113; dihydrodipicolinate reductase N-terminus domain-containing protein 5379807 dapB 4531261 dapB Mycobacterium smegmatis str. MC2 155 dihydrodipicolinate reductase N-terminus domain-containing protein YP_889533.1 5378758 R 246196 CDS YP_889534.1 118468525 4535350 complement(5379874..5382042) 1 NC_008596.1 identified by match to protein family HMM PF00376; serine/threonine protein kinase 5382042 4535350 MSMEG_5288 Mycobacterium smegmatis str. MC2 155 serine/threonine protein kinase YP_889534.1 5379874 R 246196 CDS YP_889535.1 118472158 4535684 5382010..5382222 1 NC_008596.1 hypothetical protein 5382222 4535684 MSMEG_5289 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889535.1 5382010 D 246196 CDS YP_889536.1 118467718 4537726 5382453..5382716 1 NC_008596.1 hypothetical protein 5382716 4537726 MSMEG_5290 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889536.1 5382453 D 246196 CDS YP_889537.1 118470598 4532100 complement(5382807..5384423) 1 NC_008596.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 5384423 4532100 MSMEG_5291 Mycobacterium smegmatis str. MC2 155 long-chain-fatty-acid--CoA ligase YP_889537.1 5382807 R 246196 CDS YP_889538.1 118468170 4535042 5384572..5384877 1 NC_008596.1 hypothetical protein 5384877 4535042 MSMEG_5292 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889538.1 5384572 D 246196 CDS YP_889539.1 118470780 4531144 5384778..5384888 1 NC_008596.1 hypothetical protein 5384888 4531144 MSMEG_5293 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889539.1 5384778 D 246196 CDS YP_889540.1 118471152 4530942 5385097..5385258 1 NC_008596.1 hypothetical protein 5385258 4530942 MSMEG_5294 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889540.1 5385097 D 246196 CDS YP_889541.1 118471730 4536416 complement(5385285..5386811) 1 NC_008596.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 5386811 4536416 MSMEG_5295 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_889541.1 5385285 R 246196 CDS YP_889542.1 118473583 4534856 complement(5386813..5386935) 1 NC_008596.1 hypothetical protein 5386935 4534856 MSMEG_5296 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889542.1 5386813 R 246196 CDS YP_889543.1 118473003 4531295 5386954..5388684 1 NC_008596.1 catalyzes the formation of formyl-CoA from oxalyl-CoA; oxalyl-CoA decarboxylase 5388684 4531295 MSMEG_5297 Mycobacterium smegmatis str. MC2 155 oxalyl-CoA decarboxylase YP_889543.1 5386954 D 246196 CDS YP_889544.1 118467786 4535707 5388829..5389104 1 NC_008596.1 hypothetical protein 5389104 4535707 MSMEG_5299 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889544.1 5388829 D 246196 CDS YP_889545.1 118468816 4534072 complement(5389047..5389361) 1 NC_008596.1 hypothetical protein 5389361 4534072 MSMEG_5298 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889545.1 5389047 R 246196 CDS YP_889546.1 118469313 4533378 complement(5389451..5390179) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short-chain type dehydrogenase/reductase 5390179 4533378 MSMEG_5300 Mycobacterium smegmatis str. MC2 155 short-chain type dehydrogenase/reductase YP_889546.1 5389451 R 246196 CDS YP_889547.1 118469386 4532280 5390260..5390850 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 5390850 4532280 MSMEG_5301 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_889547.1 5390260 D 246196 CDS YP_889548.1 118473760 4537736 complement(5390951..5392324) 1 NC_008596.1 identified by match to protein family HMM PF00375; aerobic C4-dicarboxylate transporter 5392324 4537736 MSMEG_5302 Mycobacterium smegmatis str. MC2 155 aerobic C4-dicarboxylate transporter YP_889548.1 5390951 R 246196 CDS YP_889549.1 118468841 4535418 5392572..5394098 1 NC_008596.1 identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813; match to protein family HMM TIGR02121; sodium/proline symporter 5394098 putP 4535418 putP Mycobacterium smegmatis str. MC2 155 sodium/proline symporter YP_889549.1 5392572 D 246196 CDS YP_889550.1 118470492 4537176 5394189..5395772 1 NC_008596.1 identified by match to protein family HMM PF02518; two-component sensor kinase 5395772 4537176 MSMEG_5304 Mycobacterium smegmatis str. MC2 155 two-component sensor kinase YP_889550.1 5394189 D 246196 CDS YP_889551.1 118469506 4533334 5395769..5396461 1 NC_008596.1 identified by match to protein family HMM PF00072; two-component system response regulator 5396461 4533334 MSMEG_5306 Mycobacterium smegmatis str. MC2 155 two-component system response regulator YP_889551.1 5395769 D 246196 CDS YP_889552.1 118469761 4532825 complement(5396446..5397849) 1 NC_008596.1 identified by match to protein family HMM PF00732; match to protein family HMM PF05199; choline dehydrogenase 5397849 4532825 MSMEG_5305 Mycobacterium smegmatis str. MC2 155 choline dehydrogenase YP_889552.1 5396446 R 246196 CDS YP_889553.1 118469191 4535780 5397936..5398649 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5398649 4535780 MSMEG_5307 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889553.1 5397936 D 246196 CDS YP_889554.1 118473416 4537403 complement(5398656..5399762) 1 NC_008596.1 hypothetical protein 5399762 4537403 MSMEG_5308 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889554.1 5398656 R 246196 CDS YP_889555.1 118468070 4533017 complement(5400142..5400870) 1 NC_008596.1 hypothetical protein 5400870 4533017 MSMEG_5309 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889555.1 5400142 R 246196 CDS YP_889556.1 118468750 4534239 complement(5400867..5401676) 1 NC_008596.1 SAM-dependent methyltransferase 5401676 4534239 MSMEG_5310 Mycobacterium smegmatis str. MC2 155 SAM-dependent methyltransferase YP_889556.1 5400867 R 246196 CDS YP_889557.1 118469927 4535838 complement(5401673..5402452) 1 NC_008596.1 hypothetical protein 5402452 4535838 MSMEG_5311 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889557.1 5401673 R 246196 CDS YP_889558.1 118473901 4536596 complement(5402449..5403156) 1 NC_008596.1 identified by match to protein family HMM PF00005; multidrug ABC transporter ATPase 5403156 4536596 MSMEG_5312 Mycobacterium smegmatis str. MC2 155 multidrug ABC transporter ATPase YP_889558.1 5402449 R 246196 CDS YP_889559.1 118473628 4531024 complement(5403153..5403605) 1 NC_008596.1 hypothetical protein 5403605 4531024 MSMEG_5313 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889559.1 5403153 R 246196 CDS YP_889560.1 118469317 4533382 complement(5403732..5404646) 1 NC_008596.1 hypothetical protein 5404646 4533382 MSMEG_5314 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889560.1 5403732 R 246196 CDS YP_889561.1 118470609 4532112 complement(5404783..5405610) 1 NC_008596.1 identified by match to protein family HMM PF01471; match to protein family HMM PF01510; gp35 protein 5405610 4532112 MSMEG_5315 Mycobacterium smegmatis str. MC2 155 gp35 protein YP_889561.1 5404783 R 246196 CDS YP_889562.1 118469764 4532828 5405691..5406437 1 NC_008596.1 hypothetical protein 5406437 4532828 MSMEG_5317 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889562.1 5405691 D 246196 CDS YP_889563.1 118467481 4536999 complement(5406434..5407207) 1 NC_008596.1 identified by match to protein family HMM PF00005; glutamine ABC transporter ATP-binding protein 5407207 4536999 MSMEG_5316 Mycobacterium smegmatis str. MC2 155 glutamine ABC transporter ATP-binding protein YP_889563.1 5406434 R 246196 CDS YP_889564.1 118473444 4534135 complement(5407204..5408610) 1 NC_008596.1 identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726; glutamine ABC transporter permease/substrate-binding protein 5408610 4534135 MSMEG_5318 Mycobacterium smegmatis str. MC2 155 glutamine ABC transporter permease/substrate-binding protein YP_889564.1 5407204 R 246196 CDS YP_889565.1 118470850 4534305 complement(5408767..5409213) 1 NC_008596.1 identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; alkylhydroperoxidase 5409213 4534305 MSMEG_5319 Mycobacterium smegmatis str. MC2 155 alkylhydroperoxidase YP_889565.1 5408767 R 246196 CDS YP_889566.1 118468514 4535495 5409212..5409379 1 NC_008596.1 hypothetical protein 5409379 4535495 MSMEG_5320 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889566.1 5409212 D 246196 CDS YP_889567.1 118469206 4535795 5409376..5409696 1 NC_008596.1 hypothetical protein 5409696 4535795 MSMEG_5321 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889567.1 5409376 D 246196 CDS YP_889568.1 118469233 4535369 complement(5409749..5411089) 1 NC_008596.1 hypothetical protein 5411089 4535369 MSMEG_5322 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889568.1 5409749 R 246196 CDS YP_889569.1 118468901 4536694 complement(5411574..5412371) 1 NC_008596.1 hypothetical protein 5412371 4536694 MSMEG_5323 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889569.1 5411574 R 246196 CDS YP_889570.1 118468718 4532788 complement(5412499..5413248) 1 NC_008596.1 hypothetical protein 5413248 4532788 MSMEG_5324 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889570.1 5412499 R 246196 CDS YP_889571.1 118473432 4534123 5413234..5413683 1 NC_008596.1 hypothetical protein 5413683 4534123 MSMEG_5326 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889571.1 5413234 D 246196 CDS YP_889572.1 118472413 4531335 complement(5413309..5413632) 1 NC_008596.1 hypothetical protein 5413632 4531335 MSMEG_5325 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889572.1 5413309 R 246196 CDS YP_889573.1 118470863 4536795 5413873..5414196 1 NC_008596.1 hypothetical protein 5414196 4536795 MSMEG_5327 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889573.1 5413873 D 246196 CDS YP_889574.1 118471595 4536546 5414528..5414827 1 NC_008596.1 hypothetical protein 5414827 4536546 MSMEG_5328 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889574.1 5414528 D 246196 CDS YP_889575.1 118471238 4534425 complement(5414886..5415626) 1 NC_008596.1 identified by match to protein family HMM PF01169; hypothetical protein 5415626 4534425 MSMEG_5329 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889575.1 5414886 R 246196 CDS YP_889576.1 118473841 4531995 complement(5415960..5416961) 1 NC_008596.1 identified by match to protein family HMM PF01380; SIS domain-containing protein 5416961 4531995 MSMEG_5330 Mycobacterium smegmatis str. MC2 155 SIS domain-containing protein YP_889576.1 5415960 R 246196 CDS YP_889577.1 118470245 4536764 complement(5419476..5420084) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5420084 4536764 MSMEG_5332 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889577.1 5419476 R 246196 CDS YP_889578.1 118469936 4535847 5420232..5420573 1 NC_008596.1 hypothetical protein 5420573 4535847 MSMEG_5333 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889578.1 5420232 D 246196 CDS YP_889579.1 118467721 4534004 complement(5420674..5421282) 1 NC_008596.1 hypothetical protein 5421282 4534004 MSMEG_5334 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889579.1 5420674 R 246196 CDS YP_889580.1 118472325 4532913 complement(5421419..5422666) 1 NC_008596.1 identified by match to protein family HMM PF03069; formamidase 5422666 4532913 MSMEG_5335 Mycobacterium smegmatis str. MC2 155 formamidase YP_889580.1 5421419 R 246196 CDS YP_889581.1 118468471 4537292 complement(5422683..5423324) 1 NC_008596.1 identified by match to protein family HMM PF02293; amidate substrates transporter protein 5423324 4537292 MSMEG_5336 Mycobacterium smegmatis str. MC2 155 amidate substrates transporter protein YP_889581.1 5422683 R 246196 CDS YP_889582.1 118468469 4537290 complement(5423695..5424123) 1 NC_008596.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 5424123 4537290 MSMEG_5338 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_889582.1 5423695 R 246196 CDS YP_889583.1 118470781 4531145 5424226..5425299 1 NC_008596.1 nitrile hydratase regulator1 5425299 4531145 MSMEG_5339 Mycobacterium smegmatis str. MC2 155 nitrile hydratase regulator1 YP_889583.1 5424226 D 246196 CDS YP_889584.1 118473610 4531045 complement(5425307..5425912) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5425912 4531045 MSMEG_5340 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889584.1 5425307 R 246196 CDS YP_889585.1 118471566 4532214 5426007..5427203 1 NC_008596.1 identified by match to protein family HMM PF00561; dipeptidyl aminopeptidase/acylaminoacyl peptidase 5427203 4532214 MSMEG_5341 Mycobacterium smegmatis str. MC2 155 dipeptidyl aminopeptidase/acylaminoacyl peptidase YP_889585.1 5426007 D 246196 CDS YP_889586.1 118472991 4532271 complement(5427211..5427540) 1 NC_008596.1 hypothetical protein 5427540 4532271 MSMEG_5342 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889586.1 5427211 R 246196 CDS YP_889587.1 118469453 4534830 complement(5427543..5427890) 1 NC_008596.1 hypothetical protein 5427890 4534830 MSMEG_5343 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889587.1 5427543 R 246196 CDS YP_889588.1 118471266 4532140 complement(5427953..5428183) 1 NC_008596.1 hypothetical protein 5428183 4532140 MSMEG_5344 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889588.1 5427953 R 246196 CDS YP_889589.1 118470168 4534346 5428272..5429072 1 NC_008596.1 identified by match to protein family HMM PF00722; glycosyl hydrolase family protein 5429072 4534346 MSMEG_5345 Mycobacterium smegmatis str. MC2 155 glycosyl hydrolase family protein YP_889589.1 5428272 D 246196 CDS YP_889590.1 118468669 4535245 complement(5429236..5429868) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5429868 4535245 MSMEG_5346 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889590.1 5429236 R 246196 CDS YP_889591.1 118473223 4536909 5430067..5431389 1 NC_008596.1 identified by match to protein family HMM PF07690; transporter major facilitator family protein 5431389 4536909 MSMEG_5347 Mycobacterium smegmatis str. MC2 155 transporter major facilitator family protein YP_889591.1 5430067 D 246196 CDS YP_889592.1 118470979 4531899 5431409..5433004 1 NC_008596.1 identified by match to protein family HMM PF00501; medium-chain fatty acid-CoA ligase 5433004 4531899 MSMEG_5348 Mycobacterium smegmatis str. MC2 155 medium-chain fatty acid-CoA ligase YP_889592.1 5431409 D 246196 CDS YP_889593.1 118469868 4536559 5433042..5433650 1 NC_008596.1 identified by match to protein family HMM TIGR03083; hypothetical protein 5433650 4536559 MSMEG_5349 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889593.1 5433042 D 246196 CDS YP_889594.1 118468902 4536695 complement(5433830..5435251) 1 NC_008596.1 PPE family protein 5435251 4536695 MSMEG_5350 Mycobacterium smegmatis str. MC2 155 PPE family protein YP_889594.1 5433830 R 246196 CDS YP_889595.1 118473756 4537732 complement(5435376..5435558) 1 NC_008596.1 hypothetical protein 5435558 4537732 MSMEG_5351 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889595.1 5435376 R 246196 CDS YP_889596.1 118468418 4534560 5435666..5435977 1 NC_008596.1 hypothetical protein 5435977 4534560 MSMEG_5352 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889596.1 5435666 D 246196 CDS YP_889597.1 118467672 4536938 complement(5435982..5436746) 1 NC_008596.1 methyltransferase 5436746 4536938 MSMEG_5353 Mycobacterium smegmatis str. MC2 155 methyltransferase YP_889597.1 5435982 R 246196 CDS YP_889598.1 118468424 4535582 5436911..5437936 1 NC_008596.1 identified by match to protein family HMM PF00891; O-methyltransferase, family protein 2 5437936 4535582 MSMEG_5354 Mycobacterium smegmatis str. MC2 155 O-methyltransferase, family protein 2 YP_889598.1 5436911 D 246196 CDS YP_889599.1 118469900 4533219 complement(5437985..5438560) 1 NC_008596.1 hypothetical protein 5438560 4533219 MSMEG_5355 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889599.1 5437985 R 246196 CDS YP_889600.1 118472202 4530860 complement(5438797..5439021) 1 NC_008596.1 hypothetical protein 5439021 4530860 MSMEG_5356 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889600.1 5438797 R 246196 CDS YP_889601.1 118469739 4532024 5439081..5439218 1 NC_008596.1 hypothetical protein 5439218 4532024 MSMEG_5357 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889601.1 5439081 D 246196 CDS YP_889602.1 118471190 4531484 complement(5439246..5440604) 1 NC_008596.1 identified by match to protein family HMM PF03069; match to protein family HMM TIGR01409; acetamidase/formamidase 5440604 4531484 MSMEG_5358 Mycobacterium smegmatis str. MC2 155 acetamidase/formamidase YP_889602.1 5439246 R 246196 CDS YP_889603.1 118472481 4532432 complement(5440718..5441167) 1 NC_008596.1 catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase 5441167 cynS 4532432 cynS Mycobacterium smegmatis str. MC2 155 cyanate hydratase YP_889603.1 5440718 R 246196 CDS YP_889604.1 118472660 4535080 complement(5441164..5442024) 1 NC_008596.1 identified by match to protein family HMM PF01226; formate/nitrate transporter 5442024 4535080 MSMEG_5360 Mycobacterium smegmatis str. MC2 155 formate/nitrate transporter YP_889604.1 5441164 R 246196 CDS YP_889605.1 118468944 4532607 complement(5442132..5442812) 1 NC_008596.1 hypothetical protein 5442812 4532607 MSMEG_5361 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889605.1 5442132 R 246196 CDS YP_889606.1 118469599 4531104 5442231..5442995 1 NC_008596.1 hypothetical protein 5442995 4531104 MSMEG_5362 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889606.1 5442231 D 246196 CDS YP_889607.1 118470765 4533668 5442992..5443366 1 NC_008596.1 hypothetical protein 5443366 4533668 MSMEG_5363 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889607.1 5442992 D 246196 CDS YP_889608.1 118471738 4536385 complement(5443516..5444469) 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 5444469 4536385 MSMEG_5364 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_889608.1 5443516 R 246196 CDS YP_889609.1 118467941 4533421 complement(5444594..5444881) 1 NC_008596.1 RNA polymerase sigma-70 factor 5444881 4533421 MSMEG_5365 Mycobacterium smegmatis str. MC2 155 RNA polymerase sigma-70 factor YP_889609.1 5444594 R 246196 CDS YP_889610.1 118473684 4531081 5444953..5445444 1 NC_008596.1 hypothetical protein 5445444 4531081 MSMEG_5366 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889610.1 5444953 D 246196 CDS YP_889611.1 118470622 4532980 5446146..5447081 1 NC_008596.1 identified by match to protein family HMM PF00497; match to protein family HMM TIGR02995; ectoine/hydroxyectoine ABC transporter solute-binding protein 5447081 ehuB 4532980 ehuB Mycobacterium smegmatis str. MC2 155 ectoine/hydroxyectoine ABC transporter solute-binding protein YP_889611.1 5446146 D 246196 CDS YP_889612.1 118468211 4536653 5447086..5447784 1 NC_008596.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; match to protein family HMM TIGR03004; ectoine/hydroxyectoine ABC transporter permease EhuC 5447784 ehuC 4536653 ehuC Mycobacterium smegmatis str. MC2 155 ectoine/hydroxyectoine ABC transporter permease EhuC YP_889612.1 5447086 D 246196 CDS YP_889613.1 118473089 4533164 5447781..5448449 1 NC_008596.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; match to protein family HMM TIGR03003; ectoine/hydroxyectoine ABC transporter permease EhuD 5448449 ehuD 4533164 ehuD Mycobacterium smegmatis str. MC2 155 ectoine/hydroxyectoine ABC transporter permease EhuD YP_889613.1 5447781 D 246196 CDS YP_889614.1 118472130 4532172 5448466..5449230 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR03005; ectoine/hydroxyectoine ABC transporter ATP-binding protein 5449230 ehuA 4532172 ehuA Mycobacterium smegmatis str. MC2 155 ectoine/hydroxyectoine ABC transporter ATP-binding protein YP_889614.1 5448466 D 246196 CDS YP_889615.1 118469431 4534327 complement(5449234..5451729) 1 NC_008596.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00582; match to protein family HMM PF02518; match to protein family HMM PF02702; sensor protein KdpD 5451729 4534327 MSMEG_5372 Mycobacterium smegmatis str. MC2 155 sensor protein KdpD YP_889615.1 5449234 R 246196 CDS YP_889616.1 118467431 4536047 complement(5451846..5452871) 1 NC_008596.1 identified by match to protein family HMM PF00795; nitrilase 2 5452871 4536047 MSMEG_5373 Mycobacterium smegmatis str. MC2 155 nitrilase 2 YP_889616.1 5451846 R 246196 CDS YP_889617.1 118474052 4531733 complement(5452917..5454350) 1 NC_008596.1 identified by match to protein family HMM PF00120; glutamate--ammonia ligase 5454350 4531733 MSMEG_5374 Mycobacterium smegmatis str. MC2 155 glutamate--ammonia ligase YP_889617.1 5452917 R 246196 CDS YP_889618.1 118474032 4533445 complement(5454493..5455191) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 5455191 4533445 MSMEG_5375 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_889618.1 5454493 R 246196 CDS YP_889619.1 118472950 4531767 complement(5455289..5455684) 1 NC_008596.1 identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 5455684 4531767 MSMEG_5376 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889619.1 5455289 R 246196 CDS YP_889620.1 118471395 4534989 complement(5456127..5456711) 1 NC_008596.1 hypothetical protein 5456711 4534989 MSMEG_5377 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889620.1 5456127 R 246196 CDS YP_889621.1 118472049 4535395 5456430..5457752 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 5457752 4535395 MSMEG_5378 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_889621.1 5456430 D 246196 CDS YP_889622.1 118474046 4531727 complement(5457760..5458461) 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 5458461 4531727 MSMEG_5379 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_889622.1 5457760 R 246196 CDS YP_889623.1 118471176 4534962 complement(5461316..5462167) 1 NC_008596.1 hypothetical protein 5462167 4534962 MSMEG_5381 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889623.1 5461316 R 246196 CDS YP_889624.1 118469918 4535572 complement(5462776..5463546) 1 NC_008596.1 identified by match to protein family HMM PF00106; dehydrogenase/reductase SDR family protein member 4 5463546 4535572 MSMEG_5383 Mycobacterium smegmatis str. MC2 155 dehydrogenase/reductase SDR family protein member 4 YP_889624.1 5462776 R 246196 CDS YP_889625.1 118469245 4535381 complement(5463546..5463671) 1 NC_008596.1 hypothetical protein 5463671 4535381 MSMEG_5384 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889625.1 5463546 R 246196 CDS YP_889626.1 118473484 4532117 complement(5463644..5465023) 1 NC_008596.1 identified by match to protein family HMM PF00581; match to protein family HMM PF00753; metallo-beta-lactamase 5465023 4532117 MSMEG_5385 Mycobacterium smegmatis str. MC2 155 metallo-beta-lactamase YP_889626.1 5463644 R 246196 CDS YP_889627.1 118467513 4535524 5465174..5465761 1 NC_008596.1 identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein 5465761 4535524 MSMEG_5386 Mycobacterium smegmatis str. MC2 155 rhodanese-like domain-containing protein YP_889627.1 5465174 D 246196 CDS YP_889628.1 118472709 4531677 5465768..5466640 1 NC_008596.1 identified by match to protein family HMM PF01925; hypothetical protein 5466640 4531677 MSMEG_5387 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889628.1 5465768 D 246196 CDS YP_889629.1 118469552 4537498 5466725..5466973 1 NC_008596.1 identified by match to protein family HMM PF02583; hypothetical protein 5466973 4537498 MSMEG_5388 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889629.1 5466725 D 246196 CDS YP_889630.1 118467499 4537386 5466991..5467392 1 NC_008596.1 identified by match to protein family HMM PF03625; hypothetical protein 5467392 4537386 MSMEG_5390 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889630.1 5466991 D 246196 CDS YP_889631.1 118468219 4537032 complement(5467389..5468102) 1 NC_008596.1 LysA protein 5468102 4537032 MSMEG_5389 Mycobacterium smegmatis str. MC2 155 LysA protein YP_889631.1 5467389 R 246196 CDS YP_889632.1 118472067 4536707 5468304..5468513 1 NC_008596.1 hypothetical protein 5468513 4536707 MSMEG_5391 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889632.1 5468304 D 246196 CDS YP_889633.1 118471320 4534833 5468513..5470183 1 NC_008596.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase A 5470183 kdpA 4534833 kdpA Mycobacterium smegmatis str. MC2 155 potassium-transporting ATPase A YP_889633.1 5468513 D 246196 CDS YP_889634.1 118469432 4534328 5470183..5472330 1 NC_008596.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 5472330 kdpB 4534328 kdpB Mycobacterium smegmatis str. MC2 155 potassium-transporting ATPase subunit B YP_889634.1 5470183 D 246196 CDS YP_889635.1 118468048 4534162 5472332..5473198 1 NC_008596.1 identified by match to protein family HMM PF02669; potassium-transporting ATPase subunit C 5473198 4534162 MSMEG_5394 Mycobacterium smegmatis str. MC2 155 potassium-transporting ATPase subunit C YP_889635.1 5472332 D 246196 CDS YP_889636.1 118473402 4537020 5473206..5475725 1 NC_008596.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00582; match to protein family HMM PF02518; match to protein family HMM PF02702; sensor protein KdpD 5475725 4537020 MSMEG_5395 Mycobacterium smegmatis str. MC2 155 sensor protein KdpD YP_889636.1 5473206 D 246196 CDS YP_889637.1 118472637 4537656 5475722..5476414 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; KDP operon transcriptional regulatory protein KdpE 5476414 4537656 MSMEG_5396 Mycobacterium smegmatis str. MC2 155 KDP operon transcriptional regulatory protein KdpE YP_889637.1 5475722 D 246196 CDS YP_889638.1 118473617 4531052 complement(5476470..5477615) 1 NC_008596.1 identified by match to protein family HMM PF00271; ATP-dependent DNA helicase RecQ 5477615 recQ 4531052 recQ Mycobacterium smegmatis str. MC2 155 ATP-dependent DNA helicase RecQ YP_889638.1 5476470 R 246196 CDS YP_889639.1 118467760 4533391 complement(5477639..5479006) 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; ISMsm4, transposase 5479006 4533391 MSMEG_5398 Mycobacterium smegmatis str. MC2 155 ISMsm4, transposase YP_889639.1 5477639 R 246196 CDS YP_889640.1 118468759 4534248 complement(5479025..5479549) 1 NC_008596.1 identified by match to protein family HMM PF00270; ATP-dependent DNA helicase RecQ 5479549 4534248 MSMEG_5399 Mycobacterium smegmatis str. MC2 155 ATP-dependent DNA helicase RecQ YP_889640.1 5479025 R 246196 CDS YP_889641.1 118470442 4532233 complement(5479546..5481138) 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01593; dehydrogenase 5481138 4532233 MSMEG_5400 Mycobacterium smegmatis str. MC2 155 dehydrogenase YP_889641.1 5479546 R 246196 CDS YP_889642.1 118470677 4531740 complement(5481135..5481614) 1 NC_008596.1 hypothetical protein 5481614 4531740 MSMEG_5401 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889642.1 5481135 R 246196 CDS YP_889643.1 118468146 4532689 complement(5481632..5482420) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; dehydrogenase DhgA 5482420 4532689 MSMEG_5402 Mycobacterium smegmatis str. MC2 155 dehydrogenase DhgA YP_889643.1 5481632 R 246196 CDS YP_889644.1 118469697 4536830 5482552..5484423 1 NC_008596.1 identified by match to protein family HMM PF00501; propionate--CoA ligase 5484423 4536830 MSMEG_5404 Mycobacterium smegmatis str. MC2 155 propionate--CoA ligase YP_889644.1 5482552 D 246196 CDS YP_889645.1 118471459 4534378 complement(5484398..5486341) 1 NC_008596.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525; cadmium-translocating P-type ATPase 5486341 cadA 4534378 cadA Mycobacterium smegmatis str. MC2 155 cadmium-translocating P-type ATPase YP_889645.1 5484398 R 246196 CDS YP_889646.1 118472200 4530858 5486438..5486791 1 NC_008596.1 identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 5486791 4530858 MSMEG_5405 Mycobacterium smegmatis str. MC2 155 ArsR family transcriptional regulator YP_889646.1 5486438 D 246196 CDS YP_889647.1 118470274 4537535 5487002..5487118 1 NC_008596.1 hypothetical protein 5487118 4537535 MSMEG_5406 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889647.1 5487002 D 246196 CDS YP_889648.1 118469440 4534816 5487241..5487942 1 NC_008596.1 integral membrane protein 5487942 4534816 MSMEG_5407 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_889648.1 5487241 D 246196 CDS YP_889649.1 118468722 4532792 5487967..5488752 1 NC_008596.1 identified by match to protein family HMM PF01790; prolipoprotein diacylglyceryl transferase 5488752 lgt 4532792 lgt Mycobacterium smegmatis str. MC2 155 prolipoprotein diacylglyceryl transferase YP_889649.1 5487967 D 246196 CDS YP_889650.1 118468083 4536011 5489073..5489366 1 NC_008596.1 hypothetical protein 5489366 4536011 MSMEG_5409 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889650.1 5489073 D 246196 CDS YP_889651.1 118472436 4532053 5489368..5490936 1 NC_008596.1 identified by match to protein family HMM PF04055; radical SAM domain-containing protein 5490936 4532053 MSMEG_5410 Mycobacterium smegmatis str. MC2 155 radical SAM domain-containing protein YP_889651.1 5489368 D 246196 CDS YP_889652.1 118473350 4532016 5490933..5491193 1 NC_008596.1 hypothetical protein 5491193 4532016 MSMEG_5411 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889652.1 5490933 D 246196 CDS YP_889653.1 118472072 4536712 5491336..5492376 1 NC_008596.1 immunogenic protein MPT63 5492376 4536712 MSMEG_5412 Mycobacterium smegmatis str. MC2 155 immunogenic protein MPT63 YP_889653.1 5491336 D 246196 CDS YP_889654.1 118470592 4531379 complement(5492439..5493389) 1 NC_008596.1 identified by match to protein family HMM PF02541; exopolyphosphatase 5493389 4531379 MSMEG_5413 Mycobacterium smegmatis str. MC2 155 exopolyphosphatase YP_889654.1 5492439 R 246196 CDS YP_889655.1 118470730 4533281 complement(5493380..5494549) 1 NC_008596.1 identified by match to protein family HMM PF04417; match to protein family HMM PF04977; septum formation initiator subfamily protein 5494549 4533281 MSMEG_5414 Mycobacterium smegmatis str. MC2 155 septum formation initiator subfamily protein YP_889655.1 5493380 R 246196 CDS YP_889656.1 118471749 4536396 complement(5494583..5495866) 1 NC_008596.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 5495866 eno 4536396 eno Mycobacterium smegmatis str. MC2 155 phosphopyruvate hydratase YP_889656.1 5494583 R 246196 CDS YP_889657.1 118468062 4534177 complement(5495931..5496605) 1 NC_008596.1 LpqU protein 5496605 4534177 MSMEG_5416 Mycobacterium smegmatis str. MC2 155 LpqU protein YP_889657.1 5495931 R 246196 CDS YP_889658.1 118472664 4535084 5496611..5496763 1 NC_008596.1 hypothetical protein 5496763 4535084 MSMEG_5417 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889658.1 5496611 D 246196 CDS YP_889659.1 118473615 4531050 5496846..5497778 1 NC_008596.1 identified by match to protein family HMM PF03239; iron permease 5497778 4531050 MSMEG_5418 Mycobacterium smegmatis str. MC2 155 iron permease YP_889659.1 5496846 D 246196 CDS YP_889660.1 118471188 4531482 5498980..5500266 1 NC_008596.1 identified by match to protein family HMM PF04261; match to protein family HMM TIGR01409; match to protein family HMM TIGR01412; match to protein family HMM TIGR01413; Tat-translocated enzyme 5500266 4531482 MSMEG_5420 Mycobacterium smegmatis str. MC2 155 Tat-translocated enzyme YP_889660.1 5498980 D 246196 CDS YP_889661.1 118467873 4535247 5501007..5503937 1 NC_008596.1 hypothetical protein 5503937 4535247 MSMEG_5421 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889661.1 5501007 D 246196 CDS YP_889662.1 118473553 4532424 complement(5504059..5505033) 1 NC_008596.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era; nucleoside triphosphate pyrophosphohydrolase 5505033 4532424 MSMEG_5422 Mycobacterium smegmatis str. MC2 155 nucleoside triphosphate pyrophosphohydrolase YP_889662.1 5504059 R 246196 CDS YP_889663.1 118471657 4536494 complement(5505030..5508677) 1 NC_008596.1 identified by similarity to SP:P37474; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM TIGR00580; transcription-repair coupling factor 5508677 mfd 4536494 mfd Mycobacterium smegmatis str. MC2 155 transcription-repair coupling factor YP_889663.1 5505030 R 246196 CDS YP_889664.1 118470423 4534196 complement(5508726..5509340) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5509340 4534196 MSMEG_5424 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889664.1 5508726 R 246196 CDS YP_889665.1 118472980 4532260 5509565..5511013 1 NC_008596.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 5511013 glmU 4532260 glmU Mycobacterium smegmatis str. MC2 155 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_889665.1 5509565 D 246196 CDS YP_889666.1 118470710 4533925 5511115..5512095 1 NC_008596.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 5512095 4533925 MSMEG_5427 Mycobacterium smegmatis str. MC2 155 ribose-phosphate pyrophosphokinase YP_889666.1 5511115 D 246196 CDS YP_889667.1 118471445 4535120 5512096..5512443 1 NC_008596.1 identified by match to protein family HMM PF03960; match to protein family HMM TIGR00014; arsenate reductase 5512443 arsC 4535120 arsC Mycobacterium smegmatis str. MC2 155 arsenate reductase YP_889667.1 5512096 D 246196 CDS YP_889668.1 118469311 4533376 5512458..5513096 1 NC_008596.1 LpqT protein 5513096 4533376 MSMEG_5429 Mycobacterium smegmatis str. MC2 155 LpqT protein YP_889668.1 5512458 D 246196 CDS YP_889669.1 118467861 4532883 5513126..5513998 1 NC_008596.1 identified by match to protein family HMM PF00106; retinol dehydrogenase 13 5513998 4532883 MSMEG_5430 Mycobacterium smegmatis str. MC2 155 retinol dehydrogenase 13 YP_889669.1 5513126 D 246196 CDS YP_889670.1 118473057 4534609 5514158..5514805 1 NC_008596.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 5514805 4534609 MSMEG_5431 Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L25 YP_889670.1 5514158 D 246196 CDS YP_889671.1 118473398 4537016 5514818..5515393 1 NC_008596.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 5515393 pth 4537016 pth Mycobacterium smegmatis str. MC2 155 peptidyl-tRNA hydrolase YP_889671.1 5514818 D 246196 CDS YP_889672.1 118471721 4536407 complement(5515581..5516618) 1 NC_008596.1 identified by match to protein family HMM PF00037; 4Fe-4S ferredoxin 5516618 4536407 MSMEG_5433 Mycobacterium smegmatis str. MC2 155 4Fe-4S ferredoxin YP_889672.1 5515581 R 246196 CDS YP_889673.1 118471220 4533823 5516811..5517245 1 NC_008596.1 hypothetical protein 5517245 4533823 MSMEG_5434 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889673.1 5516811 D 246196 CDS YP_889674.1 118470672 4531735 complement(5517344..5518981) 1 NC_008596.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 5518981 4531735 MSMEG_5435 Mycobacterium smegmatis str. MC2 155 long-chain-fatty-acid--CoA ligase YP_889674.1 5517344 R 246196 CDS YP_889675.1 118469701 4537206 complement(5519402..5520370) 1 NC_008596.1 catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 5520370 ispE 4537206 ispE Mycobacterium smegmatis str. MC2 155 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_889675.1 5519402 R 246196 CDS YP_889676.1 118467944 4533424 5520425..5521288 1 NC_008596.1 identified by match to protein family HMM PF00069; match to protein family HMM PF01163; serine/threonine protein kinase 5521288 4533424 MSMEG_5437 Mycobacterium smegmatis str. MC2 155 serine/threonine protein kinase YP_889676.1 5520425 D 246196 CDS YP_889677.1 118473872 4531120 complement(5521390..5522283) 1 NC_008596.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 5522283 ksgA 4531120 ksgA Mycobacterium smegmatis str. MC2 155 dimethyladenosine transferase YP_889677.1 5521390 R 246196 CDS YP_889678.1 118471468 4534387 complement(5522319..5523446) 1 NC_008596.1 identified by match to protein family HMM PF03990; match to protein family HMM PF06737; match to protein family HMM PF07501; resuscitation-promoting factor RpfB 5523446 4534387 MSMEG_5439 Mycobacterium smegmatis str. MC2 155 resuscitation-promoting factor RpfB YP_889678.1 5522319 R 246196 CDS YP_889679.1 118470778 4531142 complement(5523539..5524393) 1 NC_008596.1 identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; deoxyribonuclease 5524393 4531142 MSMEG_5440 Mycobacterium smegmatis str. MC2 155 deoxyribonuclease YP_889679.1 5523539 R 246196 CDS YP_889680.1 118469128 4535341 5524418..5525965 1 NC_008596.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 5525965 metG 4535341 metG Mycobacterium smegmatis str. MC2 155 methionyl-tRNA synthetase YP_889680.1 5524418 D 246196 CDS YP_889681.1 118469871 4536562 5525967..5527316 1 NC_008596.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 5527316 4536562 MSMEG_5442 Mycobacterium smegmatis str. MC2 155 glutamate dehydrogenase YP_889681.1 5525967 D 246196 CDS YP_889682.1 118473430 4534121 5527410..5528603 1 NC_008596.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; dehydrogenase 5528603 4534121 MSMEG_5443 Mycobacterium smegmatis str. MC2 155 dehydrogenase YP_889682.1 5527410 D 246196 CDS YP_889683.1 118472821 4536675 5528600..5529505 1 NC_008596.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02957; RNA polymerase sigma-70 factor protein 5529505 4536675 MSMEG_5444 Mycobacterium smegmatis str. MC2 155 RNA polymerase sigma-70 factor protein YP_889683.1 5528600 D 246196 CDS YP_889684.1 118473035 4533188 5529526..5530779 1 NC_008596.1 catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; aminodeoxychorismate synthase component I 5530779 pabB 4533188 pabB Mycobacterium smegmatis str. MC2 155 aminodeoxychorismate synthase component I YP_889684.1 5529526 D 246196 CDS YP_889685.1 118467501 4537388 complement(5530749..5531585) 1 NC_008596.1 identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; hypothetical protein 5531585 4537388 MSMEG_5445 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889685.1 5530749 R 246196 CDS YP_889686.1 118469994 4533117 5531610..5533160 1 NC_008596.1 identified by match to protein family HMM PF02366; dolichyl-phosphate-mannose-protein mannosyltransferase 5533160 4533117 MSMEG_5447 Mycobacterium smegmatis str. MC2 155 dolichyl-phosphate-mannose-protein mannosyltransferase YP_889686.1 5531610 D 246196 CDS YP_889687.1 118472376 4534766 5533473..5534486 1 NC_008596.1 hypothetical protein 5534486 4534766 MSMEG_5449 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889687.1 5533473 D 246196 CDS YP_889688.1 118471420 4532803 complement(5534381..5535589) 1 NC_008596.1 catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 5535589 arcA 4532803 arcA Mycobacterium smegmatis str. MC2 155 arginine deiminase YP_889688.1 5534381 R 246196 CDS YP_889689.1 118471261 4531537 5535642..5536067 1 NC_008596.1 identified by similarity to SP:P22538; match to protein family HMM PF00376; match to protein family HMM TIGR01950; redox-sensitive transcriptional activator SoxR 5536067 soxR 4531537 soxR Mycobacterium smegmatis str. MC2 155 redox-sensitive transcriptional activator SoxR YP_889689.1 5535642 D 246196 CDS YP_889690.1 118472008 4533609 5536101..5536697 1 NC_008596.1 alkylated DNA repair protein 5536697 4533609 MSMEG_5451 Mycobacterium smegmatis str. MC2 155 alkylated DNA repair protein YP_889690.1 5536101 D 246196 CDS YP_889691.1 118467505 4537392 complement(5536711..5537388) 1 NC_008596.1 hypothetical protein 5537388 4537392 MSMEG_5452 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889691.1 5536711 R 246196 CDS YP_889692.1 118468257 4533990 complement(5537418..5538080) 1 NC_008596.1 hypothetical protein 5538080 4533990 MSMEG_5453 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889692.1 5537418 R 246196 CDS YP_889693.1 118471386 4534980 5538195..5539166 1 NC_008596.1 identified by match to protein family HMM PF02275; choloylglycine hydrolase 5539166 4534980 MSMEG_5454 Mycobacterium smegmatis str. MC2 155 choloylglycine hydrolase YP_889693.1 5538195 D 246196 CDS YP_889694.1 118472138 4532475 complement(5539167..5540630) 1 NC_008596.1 PE family protein 5540630 4532475 MSMEG_5455 Mycobacterium smegmatis str. MC2 155 PE family protein YP_889694.1 5539167 R 246196 CDS YP_889695.1 118472039 4535384 5540925..5541641 1 NC_008596.1 MK35 lipoprotein 5541641 4535384 MSMEG_5456 Mycobacterium smegmatis str. MC2 155 MK35 lipoprotein YP_889695.1 5540925 D 246196 CDS YP_889696.1 118469349 4533172 complement(5541650..5542498) 1 NC_008596.1 catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 5542498 4533172 MSMEG_5457 Mycobacterium smegmatis str. MC2 155 shikimate 5-dehydrogenase YP_889696.1 5541650 R 246196 CDS YP_889697.1 118468187 4534401 complement(5542495..5543496) 1 NC_008596.1 identified by match to protein family HMM PF00027; cyclic nucleotide-binding protein 5543496 4534401 MSMEG_5458 Mycobacterium smegmatis str. MC2 155 cyclic nucleotide-binding protein YP_889697.1 5542495 R 246196 CDS YP_889698.1 118468710 4532779 complement(5543529..5543693) 1 NC_008596.1 hypothetical protein 5543693 4532779 MSMEG_5459 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889698.1 5543529 R 246196 CDS YP_889699.1 118468163 4535035 complement(5543717..5544271) 1 NC_008596.1 hypothetical protein 5544271 4535035 MSMEG_5460 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889699.1 5543717 R 246196 CDS YP_889700.1 118472297 4532769 complement(5544268..5544540) 1 NC_008596.1 hypothetical protein 5544540 4532769 MSMEG_5461 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889700.1 5544268 R 246196 CDS YP_889701.1 118472855 4537451 5545249..5546187 1 NC_008596.1 identified by match to protein family HMM TIGR00688; RarD protein 5546187 rarD 4537451 rarD Mycobacterium smegmatis str. MC2 155 RarD protein YP_889701.1 5545249 D 246196 CDS YP_889702.1 118470939 4533674 5546238..5547116 1 NC_008596.1 identified by match to protein family HMM PF03446; 6-phosphogluconate dehydrogenase 5547116 4533674 MSMEG_5463 Mycobacterium smegmatis str. MC2 155 6-phosphogluconate dehydrogenase YP_889702.1 5546238 D 246196 CDS YP_889703.1 118468695 4534685 5547113..5548270 1 NC_008596.1 identified by match to protein family HMM PF07690; integral membrane transporter 5548270 4534685 MSMEG_5464 Mycobacterium smegmatis str. MC2 155 integral membrane transporter YP_889703.1 5547113 D 246196 CDS YP_889704.1 118467424 4536040 5548286..5549011 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; oxidoreductase 5549011 4536040 MSMEG_5466 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_889704.1 5548286 D 246196 CDS YP_889705.1 118473084 4533159 complement(5548969..5549820) 1 NC_008596.1 identified by match to protein family HMM PF00165; match to protein family HMM PF02311; AraC family transcriptional regulator 5549820 4533159 MSMEG_5465 Mycobacterium smegmatis str. MC2 155 AraC family transcriptional regulator YP_889705.1 5548969 R 246196 CDS YP_889706.1 118471114 4533473 complement(5550191..5551345) 1 NC_008596.1 hypothetical protein 5551345 4533473 MSMEG_5468 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889706.1 5550191 R 246196 CDS YP_889707.1 118469097 4535289 complement(5551581..5552210) 1 NC_008596.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 5552210 4535289 MSMEG_5469 Mycobacterium smegmatis str. MC2 155 GNAT family acetyltransferase YP_889707.1 5551581 R 246196 CDS YP_889708.1 118472525 4534724 complement(5552239..5553486) 1 NC_008596.1 identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis protein MoeA 1 5553486 4534724 MSMEG_5470 Mycobacterium smegmatis str. MC2 155 molybdopterin biosynthesis protein MoeA 1 YP_889708.1 5552239 R 246196 CDS YP_889709.1 118471026 4534482 complement(5553543..5554439) 1 NC_008596.1 identified by match to protein family HMM PF00483; UTP-glucose-1-phosphate uridylyltransferase 5554439 galU 4534482 galU Mycobacterium smegmatis str. MC2 155 UTP-glucose-1-phosphate uridylyltransferase YP_889709.1 5553543 R 246196 CDS YP_889710.1 118470364 4534639 5554506..5555090 1 NC_008596.1 identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; 5,10-methenyltetrahydrofolate synthetase 5555090 4534639 MSMEG_5472 Mycobacterium smegmatis str. MC2 155 5,10-methenyltetrahydrofolate synthetase YP_889710.1 5554506 D 246196 CDS YP_889711.1 118467587 4531403 5555211..5557037 1 NC_008596.1 identified by match to protein family HMM PF00324; transporter 5557037 4531403 MSMEG_5473 Mycobacterium smegmatis str. MC2 155 transporter YP_889711.1 5555211 D 246196 CDS YP_889712.1 118467904 4531260 5557034..5557930 1 NC_008596.1 identified by match to protein family HMM PF00582; universal stress protein family protein 5557930 4531260 MSMEG_5474 Mycobacterium smegmatis str. MC2 155 universal stress protein family protein YP_889712.1 5557034 D 246196 CDS YP_889713.1 118470499 4537183 complement(5557934..5558698) 1 NC_008596.1 identified by match to protein family HMM PF01614; acetate operon repressor 5558698 4537183 MSMEG_5475 Mycobacterium smegmatis str. MC2 155 acetate operon repressor YP_889713.1 5557934 R 246196 CDS YP_889714.1 118469294 4532633 complement(5558806..5560602) 1 NC_008596.1 catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase 5560602 gcl 4532633 gcl Mycobacterium smegmatis str. MC2 155 glyoxylate carboligase YP_889714.1 5558806 R 246196 CDS YP_889715.1 118468291 4533049 complement(5560599..5561513) 1 NC_008596.1 identified by match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR01505; 2-hydroxy-3-oxopropionate reductase 5561513 4533049 MSMEG_5477 Mycobacterium smegmatis str. MC2 155 2-hydroxy-3-oxopropionate reductase YP_889715.1 5560599 R 246196 CDS YP_889716.1 118470256 4537147 complement(5561544..5562377) 1 NC_008596.1 identified by similarity to SP:P30147; match to protein family HMM PF01261; hydroxypyruvate isomerase 5562377 4537147 MSMEG_5478 Mycobacterium smegmatis str. MC2 155 hydroxypyruvate isomerase YP_889716.1 5561544 R 246196 CDS YP_889717.1 118472246 4532467 5562618..5562938 1 NC_008596.1 identified by match to protein family HMM TIGR02605; type I antifreeze protein 5562938 4532467 MSMEG_5479 Mycobacterium smegmatis str. MC2 155 type I antifreeze protein YP_889717.1 5562618 D 246196 CDS YP_889718.1 118469802 4535943 5563017..5563667 1 NC_008596.1 hypothetical protein 5563667 4535943 MSMEG_5481 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889718.1 5563017 D 246196 CDS YP_889719.1 118470817 4531928 complement(5563661..5563867) 1 NC_008596.1 hypothetical protein 5563867 4531928 MSMEG_5480 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889719.1 5563661 R 246196 CDS YP_889720.1 118468275 4535762 5564013..5564483 1 NC_008596.1 forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 5564483 mscL 4535762 mscL Mycobacterium smegmatis str. MC2 155 large-conductance mechanosensitive channel YP_889720.1 5564013 D 246196 CDS YP_889721.1 118472793 4533136 complement(5564562..5565209) 1 NC_008596.1 porin 5565209 4533136 MSMEG_5483 Mycobacterium smegmatis str. MC2 155 porin YP_889721.1 5564562 R 246196 CDS YP_889722.1 118470537 4532991 complement(5565602..5565760) 1 NC_008596.1 hypothetical protein 5565760 4532991 MSMEG_5484 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889722.1 5565602 R 246196 CDS YP_889723.1 118467790 4535712 complement(5565920..5566456) 1 NC_008596.1 identified by match to protein family HMM PF00994; match to protein family HMM TIGR00177; molybdopterin biosynthesis protein 5566456 4535712 MSMEG_5485 Mycobacterium smegmatis str. MC2 155 molybdopterin biosynthesis protein YP_889723.1 5565920 R 246196 CDS YP_889724.1 118471908 4536208 complement(5566507..5567841) 1 NC_008596.1 identified by match to protein family HMM PF00089; match to protein family HMM PF00595; peptidase S1 and S6, chymotrypsin/Hap 5567841 4536208 MSMEG_5486 Mycobacterium smegmatis str. MC2 155 peptidase S1 and S6, chymotrypsin/Hap YP_889724.1 5566507 R 246196 CDS YP_889725.1 118473327 4530986 complement(5568015..5569535) 1 NC_008596.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 5569535 4530986 MSMEG_5487 Mycobacterium smegmatis str. MC2 155 sensor histidine kinase YP_889725.1 5568015 R 246196 CDS YP_889726.1 118473019 4532340 complement(5569498..5570190) 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 5570190 4532340 MSMEG_5488 Mycobacterium smegmatis str. MC2 155 DNA-binding response regulator YP_889726.1 5569498 R 246196 CDS YP_889727.1 118469072 4537258 complement(5570348..5570521) 1 NC_008596.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 5570521 rpmF 4537258 rpmF Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L32 YP_889727.1 5570348 R 246196 CDS YP_889728.1 118469986 4533109 5570784..5572490 1 NC_008596.1 identified by match to protein family HMM PF07287; hypothetical protein 5572490 4533109 MSMEG_5490 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889728.1 5570784 D 246196 CDS YP_889729.1 118473137 4531198 5572487..5573635 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 5573635 4531198 MSMEG_5491 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_889729.1 5572487 D 246196 CDS YP_889730.1 118473703 4533251 5573632..5575227 1 NC_008596.1 identified by match to protein family HMM PF01039; acetyl-CoA carboxylase carboxyltransferase 5575227 4533251 MSMEG_5492 Mycobacterium smegmatis str. MC2 155 acetyl-CoA carboxylase carboxyltransferase YP_889730.1 5573632 D 246196 CDS YP_889731.1 118467895 4531251 5575327..5577273 1 NC_008596.1 identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02785; match to protein family HMM PF02786; acetyl-/propionyl-coenzyme A carboxylase subunit alpha 5577273 4531251 MSMEG_5493 Mycobacterium smegmatis str. MC2 155 acetyl-/propionyl-coenzyme A carboxylase subunit alpha YP_889731.1 5575327 D 246196 CDS YP_889732.1 118472329 4534220 5577270..5578430 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 5578430 4534220 MSMEG_5494 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_889732.1 5577270 D 246196 CDS YP_889733.1 118469373 4535887 5578430..5579197 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 5579197 4535887 MSMEG_5495 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_889733.1 5578430 D 246196 CDS YP_889734.1 118472252 4531561 5579234..5580490 1 NC_008596.1 identified by match to protein family HMM PF00924; MscS mechanosensitive ion channel 5580490 4531561 MSMEG_5496 Mycobacterium smegmatis str. MC2 155 MscS mechanosensitive ion channel YP_889734.1 5579234 D 246196 CDS YP_889735.1 118473896 4536591 5580542..5580670 1 NC_008596.1 hypothetical protein 5580670 4536591 MSMEG_5497 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889735.1 5580542 D 246196 CDS YP_889736.1 118473225 4536911 complement(5580675..5581037) 1 NC_008596.1 hypothetical protein 5581037 4536911 MSMEG_5498 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889736.1 5580675 R 246196 CDS YP_889737.1 118472720 4531689 complement(5581091..5581405) 1 NC_008596.1 hypothetical protein 5581405 4531689 MSMEG_5499 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889737.1 5581091 R 246196 CDS YP_889738.1 118472119 4532161 complement(5581863..5582015) 1 NC_008596.1 hypothetical protein 5582015 4532161 MSMEG_5500 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889738.1 5581863 R 246196 CDS YP_889739.1 118472050 4535396 5582007..5584286 1 NC_008596.1 hypothetical protein 5584286 4535396 MSMEG_5501 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889739.1 5582007 D 246196 CDS YP_889740.1 118470209 4532503 5584716..5586893 1 NC_008596.1 hypothetical protein 5586893 4532503 MSMEG_5502 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889740.1 5584716 D 246196 CDS YP_889741.1 118468505 4535486 5587465..5588505 1 NC_008596.1 hypothetical protein 5588505 4535486 MSMEG_5503 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889741.1 5587465 D 246196 CDS YP_889742.1 118472478 4533845 5588558..5589319 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF05368; hypothetical protein 5589319 4533845 MSMEG_5504 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889742.1 5588558 D 246196 CDS YP_889743.1 118473621 4531017 5589415..5589999 1 NC_008596.1 identified by match to protein family HMM PF08044; hypothetical protein 5589999 4531017 MSMEG_5505 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889743.1 5589415 D 246196 CDS YP_889744.1 118468550 4536102 complement(5590070..5590582) 1 NC_008596.1 hypothetical protein 5590582 4536102 MSMEG_5506 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889744.1 5590070 R 246196 CDS YP_889745.1 118472673 4532938 complement(5590921..5592249) 1 NC_008596.1 hypothetical protein 5592249 4532938 MSMEG_5507 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889745.1 5590921 R 246196 CDS YP_889746.1 118473791 4531269 complement(5593079..5594662) 1 NC_008596.1 identified by match to protein family HMM PF00245; match to protein family HMM TIGR01409; alkaline phosphatase 5594662 4531269 MSMEG_5508 Mycobacterium smegmatis str. MC2 155 alkaline phosphatase YP_889746.1 5593079 R 246196 CDS YP_889747.1 118469777 4535801 5594766..5595632 1 NC_008596.1 hypothetical protein 5595632 4535801 MSMEG_5509 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889747.1 5594766 D 246196 CDS YP_889748.1 118468311 4533790 complement(5596653..5598653) 1 NC_008596.1 von Willebrand factor A 5598653 4533790 MSMEG_5511 Mycobacterium smegmatis str. MC2 155 von Willebrand factor A YP_889748.1 5596653 R 246196 CDS YP_889749.1 118471547 4537628 complement(5598646..5600031) 1 NC_008596.1 magnesium chelatase 5600031 4537628 MSMEG_5512 Mycobacterium smegmatis str. MC2 155 magnesium chelatase YP_889749.1 5598646 R 246196 CDS YP_889750.1 118468993 4535103 5600142..5601998 1 NC_008596.1 identified by match to protein family HMM PF00069; serine/threonine protein kinase 5601998 4535103 MSMEG_5513 Mycobacterium smegmatis str. MC2 155 serine/threonine protein kinase YP_889750.1 5600142 D 246196 CDS YP_889751.1 118469302 4532641 complement(5602005..5602658) 1 NC_008596.1 hypothetical protein 5602658 4532641 MSMEG_5514 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889751.1 5602005 R 246196 CDS YP_889752.1 118471289 4532183 complement(5602692..5604275) 1 NC_008596.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 5604275 purH 4532183 purH Mycobacterium smegmatis str. MC2 155 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_889752.1 5602692 R 246196 CDS YP_889753.1 118468171 4535043 complement(5604286..5604897) 1 NC_008596.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 5604897 purN 4535043 purN Mycobacterium smegmatis str. MC2 155 phosphoribosylglycinamide formyltransferase YP_889753.1 5604286 R 246196 CDS YP_889754.1 118473475 4531178 complement(5604926..5606389) 1 NC_008596.1 hypothetical protein 5606389 4531178 MSMEG_5517 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889754.1 5604926 R 246196 CDS YP_889755.1 118470898 4537572 complement(5606450..5607349) 1 NC_008596.1 antigen 34 kDa 5607349 4537572 MSMEG_5518 Mycobacterium smegmatis str. MC2 155 antigen 34 kDa YP_889755.1 5606450 R 246196 CDS YP_889756.1 118469371 4535885 complement(5607496..5608626) 1 NC_008596.1 identified by match to protein family HMM PF00296; monooxygenase 5608626 4535885 MSMEG_5519 Mycobacterium smegmatis str. MC2 155 monooxygenase YP_889756.1 5607496 R 246196 CDS YP_889757.1 118467939 4533418 5608770..5609618 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 5609618 4533418 MSMEG_5520 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889757.1 5608770 D 246196 CDS YP_889758.1 118468053 4534167 complement(5609621..5611144) 1 NC_008596.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 5611144 4534167 MSMEG_5521 Mycobacterium smegmatis str. MC2 155 acetyl-CoA acetyltransferase YP_889758.1 5609621 R 246196 CDS YP_889759.1 118469562 4537508 5611326..5611943 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5611943 4537508 MSMEG_5522 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889759.1 5611326 D 246196 CDS YP_889760.1 118472868 4531352 5612016..5613869 1 NC_008596.1 identified by match to protein family HMM PF00326; match to protein family HMM PF02129; peptidase 5613869 4531352 MSMEG_5523 Mycobacterium smegmatis str. MC2 155 peptidase YP_889760.1 5612016 D 246196 CDS YP_889761.1 118469852 4530890 complement(5613938..5614840) 1 NC_008596.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 5614840 sucD 4530890 sucD Mycobacterium smegmatis str. MC2 155 succinyl-CoA synthetase subunit alpha YP_889761.1 5613938 R 246196 CDS YP_889762.1 118469786 4535810 complement(5614853..5616016) 1 NC_008596.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 5616016 sucC 4535810 sucC Mycobacterium smegmatis str. MC2 155 succinyl-CoA synthetase subunit beta YP_889762.1 5614853 R 246196 CDS YP_889763.1 118471629 4536504 5616372..5617415 1 NC_008596.1 identified by match to protein family HMM PF01551; peptidoglycan-binding LysM 5617415 4536504 MSMEG_5526 Mycobacterium smegmatis str. MC2 155 peptidoglycan-binding LysM YP_889763.1 5616372 D 246196 CDS YP_889764.1 118471321 4534834 5617416..5618099 1 NC_008596.1 hypothetical protein 5618099 4534834 MSMEG_5527 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889764.1 5617416 D 246196 CDS YP_889765.1 118468564 4533698 complement(5618136..5618255) 1 NC_008596.1 hypothetical protein 5618255 4533698 MSMEG_5528 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889765.1 5618136 R 246196 CDS YP_889766.1 118468683 4535906 5618274..5619242 1 NC_008596.1 hypothetical protein 5619242 4535906 MSMEG_5529 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889766.1 5618274 D 246196 CDS YP_889767.1 118469712 4537217 5619221..5620093 1 NC_008596.1 identified by match to protein family HMM PF00528; aliphatic sulfonates transport permease SsuC 5620093 4537217 MSMEG_5530 Mycobacterium smegmatis str. MC2 155 aliphatic sulfonates transport permease SsuC YP_889767.1 5619221 D 246196 CDS YP_889768.1 118471727 4536413 5620090..5620818 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 5620818 4536413 MSMEG_5531 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_889768.1 5620090 D 246196 CDS YP_889769.1 118471552 4532200 5620808..5622400 1 NC_008596.1 identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF03486; match to protein family HMM PF07992; FAD dependent oxidoreductase 5622400 4532200 MSMEG_5532 Mycobacterium smegmatis str. MC2 155 FAD dependent oxidoreductase YP_889769.1 5620808 D 246196 CDS YP_889770.1 118471643 4536480 5622397..5622798 1 NC_008596.1 identified by match to protein family HMM PF00037; 4Fe-4S ferredoxin 5622798 4536480 MSMEG_5533 Mycobacterium smegmatis str. MC2 155 4Fe-4S ferredoxin YP_889770.1 5622397 D 246196 CDS YP_889771.1 118471354 4533238 complement(5622802..5625153) 1 NC_008596.1 identified by match to protein family HMM PF00580; match to protein family HMM TIGR01073; ATP-dependent DNA helicase PcrA 5625153 pcrA 4533238 pcrA Mycobacterium smegmatis str. MC2 155 ATP-dependent DNA helicase PcrA YP_889771.1 5622802 R 246196 CDS YP_889772.1 118470524 4536116 5625064..5625345 1 NC_008596.1 hypothetical protein 5625345 4536116 MSMEG_5535 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889772.1 5625064 D 246196 CDS YP_889773.1 118469683 4536816 5625390..5625656 1 NC_008596.1 identified by match to protein family HMM TIGR01808; chorismate mutase 5625656 4536816 MSMEG_5536 Mycobacterium smegmatis str. MC2 155 chorismate mutase YP_889773.1 5625390 D 246196 CDS YP_889774.1 118467801 4535977 complement(5625750..5627759) 1 NC_008596.1 identified by match to protein family HMM PF01757; integral membrane protein 5627759 4535977 MSMEG_5537 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_889774.1 5625750 R 246196 CDS YP_889775.1 118473573 4531007 5627890..5628903 1 NC_008596.1 hypothetical protein 5628903 4531007 MSMEG_5539 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889775.1 5627890 D 246196 CDS YP_889776.1 118470915 4537589 complement(5628893..5630341) 1 NC_008596.1 identified by match to protein family HMM PF00171; [NADP+] succinate-semialdehyde dehydrogenase 5630341 4537589 MSMEG_5538 Mycobacterium smegmatis str. MC2 155 [NADP+] succinate-semialdehyde dehydrogenase YP_889776.1 5628893 R 246196 CDS YP_889777.1 118471574 4534436 5630392..5632041 1 NC_008596.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 5632041 pgi 4534436 pgi Mycobacterium smegmatis str. MC2 155 glucose-6-phosphate isomerase YP_889777.1 5630392 D 246196 CDS YP_889778.1 118470872 4536804 complement(5632038..5632613) 1 NC_008596.1 hypothetical protein 5632613 4536804 MSMEG_5540 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889778.1 5632038 R 246196 CDS YP_889779.1 118473468 4531170 complement(5632606..5632887) 1 NC_008596.1 identified by match to protein family HMM PF01381; transcriptional regulator 5632887 4531170 MSMEG_5542 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_889779.1 5632606 R 246196 CDS YP_889780.1 118472751 4531940 complement(5632985..5633326) 1 NC_008596.1 hypothetical protein 5633326 4531940 MSMEG_5543 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889780.1 5632985 R 246196 CDS YP_889781.1 118469537 4537111 complement(5633446..5634195) 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 5634195 4537111 MSMEG_5544 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_889781.1 5633446 R 246196 CDS YP_889782.1 118468423 4535581 complement(5634240..5635106) 1 NC_008596.1 identified by match to protein family HMM PF01149; match to protein family HMM PF06831; formamidopyrimidine-DNA glycosylase 5635106 4535581 MSMEG_5545 Mycobacterium smegmatis str. MC2 155 formamidopyrimidine-DNA glycosylase YP_889782.1 5634240 R 246196 CDS YP_889783.1 118471385 4534979 5635137..5636897 1 NC_008596.1 hypothetical protein 5636897 4534979 MSMEG_5547 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889783.1 5635137 D 246196 CDS YP_889784.1 118469640 4535050 complement(5636862..5637251) 1 NC_008596.1 identified by match to protein family HMM PF04020; membrane spanning protein 5637251 4535050 MSMEG_5546 Mycobacterium smegmatis str. MC2 155 membrane spanning protein YP_889784.1 5636862 R 246196 CDS YP_889785.1 118471277 4532151 complement(5637258..5637998) 1 NC_008596.1 catalyzes the formation of precorrin 6x from precorrin 5; precorrin 6A synthase 5637998 cobF 4532151 cobF Mycobacterium smegmatis str. MC2 155 precorrin 6A synthase YP_889785.1 5637258 R 246196 CDS YP_889786.1 118468316 4533795 5638116..5639345 1 NC_008596.1 hypothetical protein 5639345 4533795 MSMEG_5549 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889786.1 5638116 D 246196 CDS YP_889787.1 118473452 4534896 5640458..5641219 1 NC_008596.1 identified by match to protein family HMM PF01740; stas domain-containing protein 5641219 4534896 MSMEG_5551 Mycobacterium smegmatis str. MC2 155 stas domain-containing protein YP_889787.1 5640458 D 246196 CDS YP_889788.1 118471834 4536288 5641267..5643117 1 NC_008596.1 identified by match to protein family HMM PF00989; match to protein family HMM PF01739; match to protein family HMM PF03705; match to protein family HMM TIGR00229; chemotaxis protein CheR 5643117 cheR 4536288 cheR Mycobacterium smegmatis str. MC2 155 chemotaxis protein CheR YP_889788.1 5641267 D 246196 CDS YP_889789.1 118471104 4535869 complement(5643114..5643251) 1 NC_008596.1 hypothetical protein 5643251 4535869 MSMEG_5552 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889789.1 5643114 R 246196 CDS YP_889790.1 118472799 4533142 complement(5643478..5644194) 1 NC_008596.1 identified by match to protein family HMM PF03861; ANTAR domain-containing protein 5644194 4533142 MSMEG_5554 Mycobacterium smegmatis str. MC2 155 ANTAR domain-containing protein YP_889790.1 5643478 R 246196 CDS YP_889791.1 118471207 4533809 5645336..5646550 1 NC_008596.1 identified by match to protein family HMM PF07690; MFS permease 5646550 4533809 MSMEG_5556 Mycobacterium smegmatis str. MC2 155 MFS permease YP_889791.1 5645336 D 246196 CDS YP_889792.1 118471563 4532211 complement(5646557..5647120) 1 NC_008596.1 hypothetical protein 5647120 4532211 MSMEG_5557 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889792.1 5646557 R 246196 CDS YP_889793.1 118471848 4536302 5647334..5647645 1 NC_008596.1 hypothetical protein 5647645 4536302 MSMEG_5558 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889793.1 5647334 D 246196 CDS YP_889794.1 118468325 4533805 5647818..5649233 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; metabolite/sugar transporter 5649233 4533805 MSMEG_5559 Mycobacterium smegmatis str. MC2 155 metabolite/sugar transporter YP_889794.1 5647818 D 246196 CDS YP_889795.1 118470213 4532507 5649256..5649882 1 NC_008596.1 hypothetical protein 5649882 4532507 MSMEG_5560 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889795.1 5649256 D 246196 CDS YP_889796.1 118471204 4531498 5649967..5650446 1 NC_008596.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 5650446 rnhA 4531498 rnhA Mycobacterium smegmatis str. MC2 155 ribonuclease H YP_889796.1 5649967 D 246196 CDS YP_889797.1 118473936 4537374 complement(5650412..5650957) 1 NC_008596.1 identified by match to protein family HMM PF04982; HPP family protein 5650957 4537374 MSMEG_5561 Mycobacterium smegmatis str. MC2 155 HPP family protein YP_889797.1 5650412 R 246196 CDS YP_889798.1 118470263 4537155 complement(5651232..5652212) 1 NC_008596.1 identified by match to protein family HMM PF00165; match to protein family HMM PF01965; AraC family transcriptional regulator 5652212 4537155 MSMEG_5563 Mycobacterium smegmatis str. MC2 155 AraC family transcriptional regulator YP_889798.1 5651232 R 246196 CDS YP_889799.1 118473409 4537396 5652298..5653074 1 NC_008596.1 identified by similarity to SP:P16083; match to protein family HMM PF02525; NAD(P)H dehydrogenase, quinone family protein 5653074 4537396 MSMEG_5564 Mycobacterium smegmatis str. MC2 155 NAD(P)H dehydrogenase, quinone family protein YP_889799.1 5652298 D 246196 CDS YP_889800.1 118471017 4534473 complement(5653075..5653701) 1 NC_008596.1 hypothetical protein 5653701 4534473 MSMEG_5565 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889800.1 5653075 R 246196 CDS YP_889801.1 118469025 4530877 complement(5653799..5654224) 1 NC_008596.1 identified by match to protein family HMM PF01047; transcriptional regulator 5654224 4530877 MSMEG_5566 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_889801.1 5653799 R 246196 CDS YP_889802.1 118469747 4532032 complement(5654425..5655027) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5655027 4532032 MSMEG_5567 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889802.1 5654425 R 246196 CDS YP_889803.1 118470589 4531376 5655119..5655880 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; clavaldehyde dehydrogenase 5655880 4531376 MSMEG_5568 Mycobacterium smegmatis str. MC2 155 clavaldehyde dehydrogenase YP_889803.1 5655119 D 246196 CDS YP_889804.1 118469143 4532559 5655917..5656684 1 NC_008596.1 identified by match to protein family HMM PF00106; clavaldehyde dehydrogenase 5656684 4532559 MSMEG_5569 Mycobacterium smegmatis str. MC2 155 clavaldehyde dehydrogenase YP_889804.1 5655917 D 246196 CDS YP_889805.1 118473774 4535131 complement(5656824..5659091) 1 NC_008596.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity; ATP-dependent DNA ligase 5659091 4535131 MSMEG_5570 Mycobacterium smegmatis str. MC2 155 ATP-dependent DNA ligase YP_889805.1 5656824 R 246196 CDS YP_889806.1 118471130 4531817 complement(5659133..5660218) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 5660218 4531817 MSMEG_5571 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_889806.1 5659133 R 246196 CDS YP_889807.1 118472985 4532265 complement(5660234..5661112) 1 NC_008596.1 identified by match to protein family HMM PF00528; sugar ABC transporter permease 5661112 4532265 MSMEG_5572 Mycobacterium smegmatis str. MC2 155 sugar ABC transporter permease YP_889807.1 5660234 R 246196 CDS YP_889808.1 118469186 4534293 complement(5661109..5662071) 1 NC_008596.1 identified by match to protein family HMM PF00528; sugar ABC transporter permease 5662071 4534293 MSMEG_5573 Mycobacterium smegmatis str. MC2 155 sugar ABC transporter permease YP_889808.1 5661109 R 246196 CDS YP_889809.1 118469881 4536573 complement(5662068..5663411) 1 NC_008596.1 identified by match to protein family HMM PF01547; substrate binding protein 5663411 4536573 MSMEG_5574 Mycobacterium smegmatis str. MC2 155 substrate binding protein YP_889809.1 5662068 R 246196 CDS YP_889810.1 118473906 4536972 complement(5663425..5664351) 1 NC_008596.1 identified by match to protein family HMM PF04198; repressor 5664351 4536972 MSMEG_5575 Mycobacterium smegmatis str. MC2 155 repressor YP_889810.1 5663425 R 246196 CDS YP_889811.1 118469264 4531557 5664415..5665851 1 NC_008596.1 identified by match to protein family HMM PF01232; match to protein family HMM PF08125; D-mannonate oxidoreductase 5665851 4531557 MSMEG_5576 Mycobacterium smegmatis str. MC2 155 D-mannonate oxidoreductase YP_889811.1 5664415 D 246196 CDS YP_889812.1 118467347 4534706 5665848..5666768 1 NC_008596.1 identified by match to protein family HMM PF00294; fructokinase 5666768 4534706 MSMEG_5577 Mycobacterium smegmatis str. MC2 155 fructokinase YP_889812.1 5665848 D 246196 CDS YP_889813.1 118473007 4531299 complement(5666805..5668283) 1 NC_008596.1 hypothetical protein 5668283 4531299 MSMEG_5578 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889813.1 5666805 R 246196 CDS YP_889814.1 118473740 4537345 complement(5668343..5668813) 1 NC_008596.1 identified by match to protein family HMM PF01022; match to protein family HMM PF01047; MarR family transcriptional regulator 5668813 4537345 MSMEG_5579 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_889814.1 5668343 R 246196 CDS YP_889815.1 118471519 4537230 5668970..5669956 1 NC_008596.1 identified by match to protein family HMM PF02735; match to protein family HMM TIGR02772; Ku protein 5669956 4537230 MSMEG_5580 Mycobacterium smegmatis str. MC2 155 Ku protein YP_889815.1 5668970 D 246196 CDS YP_889816.1 118472214 4531464 complement(5669968..5670690) 1 NC_008596.1 identified by match to protein family HMM TIGR02206; hypothetical protein 5670690 4531464 MSMEG_5581 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889816.1 5669968 R 246196 CDS YP_889817.1 118469983 4533106 complement(5670763..5671227) 1 NC_008596.1 hypothetical protein 5671227 4533106 MSMEG_5582 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889817.1 5670763 R 246196 CDS YP_889818.1 118473213 4531063 complement(5671280..5673175) 1 NC_008596.1 identified by match to protein family HMM PF01844; match to protein family HMM PF02720; HNH endonuclease 5673175 4531063 MSMEG_5583 Mycobacterium smegmatis str. MC2 155 HNH endonuclease YP_889818.1 5671280 R 246196 CDS YP_889819.1 118472040 4535385 5673254..5674048 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 5674048 4535385 MSMEG_5584 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_889819.1 5673254 D 246196 CDS YP_889820.1 118471272 4532146 5674061..5675137 1 NC_008596.1 identified by match to protein family HMM PF01113; match to protein family HMM PF01408; hypothetical protein 5675137 4532146 MSMEG_5586 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889820.1 5674061 D 246196 CDS YP_889821.1 118472415 4531337 complement(5675106..5675636) 1 NC_008596.1 hypothetical protein 5675636 4531337 MSMEG_5585 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889821.1 5675106 R 246196 CDS YP_889822.1 118473548 4532418 5675160..5675426 1 NC_008596.1 hypothetical protein 5675426 4532418 MSMEG_5587 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889822.1 5675160 D 246196 CDS YP_889823.1 118468414 4534556 5675545..5675724 1 NC_008596.1 hypothetical protein 5675724 4534556 MSMEG_5588 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889823.1 5675545 D 246196 CDS YP_889824.1 118468025 4531382 5675819..5677042 1 NC_008596.1 identified by match to protein family HMM PF01566; match to protein family HMM TIGR01197; manganese transporter MntH 5677042 4531382 MSMEG_5589 Mycobacterium smegmatis str. MC2 155 manganese transporter MntH YP_889824.1 5675819 D 246196 CDS YP_889825.1 118469566 4537513 5677043..5678101 1 NC_008596.1 identified by match to protein family HMM PF05908; hypothetical protein 5678101 4537513 MSMEG_5591 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889825.1 5677043 D 246196 CDS YP_889826.1 118471257 4531533 complement(5678088..5679185) 1 NC_008596.1 ATP-dependent carboxylate-amine ligase; carboxylate-amine ligase 5679185 4531533 MSMEG_5590 Mycobacterium smegmatis str. MC2 155 carboxylate-amine ligase YP_889826.1 5678088 R 246196 CDS YP_889827.1 118470645 4532404 5679244..5680065 1 NC_008596.1 hypothetical protein 5680065 4532404 MSMEG_5592 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889827.1 5679244 D 246196 CDS YP_889828.1 118469280 4532250 complement(5680074..5682029) 1 NC_008596.1 identified by match to protein family HMM PF00205; match to protein family HMM PF00355; match to protein family HMM PF02775; match to protein family HMM PF02776; pyruvate dehydrogenase 5682029 4532250 MSMEG_5593 Mycobacterium smegmatis str. MC2 155 pyruvate dehydrogenase YP_889828.1 5680074 R 246196 CDS YP_889829.1 118467407 4535829 complement(5682026..5683654) 1 NC_008596.1 identified by match to protein family HMM PF00355; match to protein family HMM PF01645; ferredoxin-dependent glutamate synthase 5683654 4535829 MSMEG_5594 Mycobacterium smegmatis str. MC2 155 ferredoxin-dependent glutamate synthase YP_889829.1 5682026 R 246196 CDS YP_889830.1 118473940 4533886 complement(5683665..5684138) 1 NC_008596.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 5684138 4533886 MSMEG_5595 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_889830.1 5683665 R 246196 CDS YP_889831.1 118473041 4533194 5684407..5685162 1 NC_008596.1 identified by match to protein family HMM PF00106; oxidoreductase 5685162 4533194 MSMEG_5596 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_889831.1 5684407 D 246196 CDS YP_889832.1 118468594 4532373 5685226..5685846 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5685846 4532373 MSMEG_5597 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889832.1 5685226 D 246196 CDS YP_889833.1 118469923 4535577 complement(5686048..5686182) 1 NC_008596.1 hypothetical protein 5686182 4535577 MSMEG_5599 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889833.1 5686048 R 246196 CDS YP_889834.1 118469187 4534294 5686847..5687998 1 NC_008596.1 hypothetical protein 5687998 4534294 MSMEG_5600 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889834.1 5686847 D 246196 CDS YP_889835.1 118472103 4537484 5688013..5688570 1 NC_008596.1 hypothetical protein 5688570 4537484 MSMEG_5601 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889835.1 5688013 D 246196 CDS YP_889836.1 118471634 4536509 5688973..5689389 1 NC_008596.1 hypothetical protein 5689389 4536509 MSMEG_5602 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889836.1 5688973 D 246196 CDS YP_889837.1 118470828 4532514 5689444..5689782 1 NC_008596.1 identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 5689782 4532514 MSMEG_5603 Mycobacterium smegmatis str. MC2 155 ArsR family transcriptional regulator YP_889837.1 5689444 D 246196 CDS YP_889838.1 118473825 4531635 5689743..5690408 1 NC_008596.1 integral membrane protein 5690408 4531635 MSMEG_5604 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_889838.1 5689743 D 246196 CDS YP_889839.1 118472129 4532171 5690437..5691825 1 NC_008596.1 identified by match to protein family HMM PF01654; cytochrome bd ubiquinol oxidase subunit I 5691825 4532171 MSMEG_5605 Mycobacterium smegmatis str. MC2 155 cytochrome bd ubiquinol oxidase subunit I YP_889839.1 5690437 D 246196 CDS YP_889840.1 118469682 4536815 5691822..5692820 1 NC_008596.1 identified by match to protein family HMM PF02322; cytochrome bd-I oxidase subunit II 5692820 4536815 MSMEG_5606 Mycobacterium smegmatis str. MC2 155 cytochrome bd-I oxidase subunit II YP_889840.1 5691822 D 246196 CDS YP_889841.1 118471469 4534388 5693137..5693385 1 NC_008596.1 hypothetical protein 5693385 4534388 MSMEG_5607 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889841.1 5693137 D 246196 CDS YP_889842.1 118473795 4531274 5693487..5694701 1 NC_008596.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 5694701 4531274 MSMEG_5608 Mycobacterium smegmatis str. MC2 155 acetyl-CoA acetyltransferase YP_889842.1 5693487 D 246196 CDS YP_889843.1 118468583 4532710 5694705..5696228 1 NC_008596.1 identified by match to protein family HMM PF03055; carotenoid oxygenase 5696228 4532710 MSMEG_5609 Mycobacterium smegmatis str. MC2 155 carotenoid oxygenase YP_889843.1 5694705 D 246196 CDS YP_889844.1 118471753 4536400 5696228..5697178 1 NC_008596.1 identified by match to protein family HMM PF01638; transcriptional regulator family protein 5697178 4536400 MSMEG_5610 Mycobacterium smegmatis str. MC2 155 transcriptional regulator family protein YP_889844.1 5696228 D 246196 CDS YP_889845.1 118469131 4532547 5697272..5697730 1 NC_008596.1 identified by match to protein family HMM PF00011; spore protein 5697730 4532547 MSMEG_5611 Mycobacterium smegmatis str. MC2 155 spore protein YP_889845.1 5697272 D 246196 CDS YP_889846.1 118471548 4532196 complement(5697737..5698330) 1 NC_008596.1 identified by match to protein family HMM PF00583; amino-acid acetyltransferase 5698330 4532196 MSMEG_5612 Mycobacterium smegmatis str. MC2 155 amino-acid acetyltransferase YP_889846.1 5697737 R 246196 CDS YP_889847.1 118470745 4533297 complement(5698339..5698731) 1 NC_008596.1 transmembrane protein 5698731 4533297 MSMEG_5613 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_889847.1 5698339 R 246196 CDS YP_889848.1 118472255 4531564 5698778..5699224 1 NC_008596.1 identified by match to protein family HMM PF06172; hypothetical protein 5699224 4531564 MSMEG_5615 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889848.1 5698778 D 246196 CDS YP_889849.1 118470421 4534194 complement(5699214..5699942) 1 NC_008596.1 identified by match to protein family HMM PF05853; hypothetical protein 5699942 4534194 MSMEG_5614 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889849.1 5699214 R 246196 CDS YP_889850.1 118469287 4532626 complement(5699957..5700727) 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase/bleomycin resistance protein/dioxygenase 5700727 4532626 MSMEG_5616 Mycobacterium smegmatis str. MC2 155 glyoxalase/bleomycin resistance protein/dioxygenase YP_889850.1 5699957 R 246196 CDS YP_889851.1 118467358 4534043 complement(5700826..5701302) 1 NC_008596.1 immunogenic protein MPT63 5701302 4534043 MSMEG_5617 Mycobacterium smegmatis str. MC2 155 immunogenic protein MPT63 YP_889851.1 5700826 R 246196 CDS YP_889852.1 118472258 4531567 complement(5701411..5702439) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase 5702439 4531567 MSMEG_5618 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_889852.1 5701411 R 246196 CDS YP_889853.1 118468244 4537429 complement(5702436..5703611) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 5703611 4537429 MSMEG_5619 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_889853.1 5702436 R 246196 CDS YP_889854.1 118468820 4534076 complement(5703608..5704387) 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase 5704387 4534076 MSMEG_5620 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_889854.1 5703608 R 246196 CDS YP_889855.1 118470531 4536123 complement(5704384..5705304) 1 NC_008596.1 identified by match to protein family HMM PF00441; acyl-CoA dehydrogenase 5705304 4536123 MSMEG_5621 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_889855.1 5704384 R 246196 CDS YP_889856.1 118469965 4535739 complement(5705301..5706458) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 5706458 4535739 MSMEG_5622 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_889856.1 5705301 R 246196 CDS YP_889857.1 118471942 4536205 complement(5706470..5707621) 1 NC_008596.1 identified by match to protein family HMM PF02515; L-carnitine dehydratase/bile acid-inducible protein F 5707621 4536205 MSMEG_5623 Mycobacterium smegmatis str. MC2 155 L-carnitine dehydratase/bile acid-inducible protein F YP_889857.1 5706470 R 246196 CDS YP_889858.1 118467652 4535000 complement(5707618..5708538) 1 NC_008596.1 identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 5708538 4535000 MSMEG_5624 Mycobacterium smegmatis str. MC2 155 oxidoreductase, short chain dehydrogenase/reductase YP_889858.1 5707618 R 246196 CDS YP_889859.1 118473836 4531990 complement(5708555..5710393) 1 NC_008596.1 identified by match to protein family HMM PF01266; cyclododecanone monooxygenase 5710393 4531990 MSMEG_5625 Mycobacterium smegmatis str. MC2 155 cyclododecanone monooxygenase YP_889859.1 5708555 R 246196 CDS YP_889860.1 118469790 4535814 complement(5710390..5711562) 1 NC_008596.1 identified by match to protein family HMM PF00296; luciferase 5711562 4535814 MSMEG_5626 Mycobacterium smegmatis str. MC2 155 luciferase YP_889860.1 5710390 R 246196 CDS YP_889861.1 118468063 4533010 complement(5711559..5712947) 1 NC_008596.1 identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein 5712947 4533010 MSMEG_5627 Mycobacterium smegmatis str. MC2 155 Rieske (2Fe-2S) domain-containing protein YP_889861.1 5711559 R 246196 CDS YP_889862.1 118473038 4533191 complement(5712981..5713826) 1 NC_008596.1 identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 5713826 4533191 MSMEG_5628 Mycobacterium smegmatis str. MC2 155 oxidoreductase, short chain dehydrogenase/reductase YP_889862.1 5712981 R 246196 CDS YP_889863.1 118470791 4536074 5713967..5715571 1 NC_008596.1 hypothetical protein 5715571 4536074 MSMEG_5629 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889863.1 5713967 D 246196 CDS YP_889864.1 118471792 4536324 5715578..5716315 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07702; GntR family transcriptional regulator 5716315 4536324 MSMEG_5630 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_889864.1 5715578 D 246196 CDS YP_889865.1 118467940 4533420 5716317..5717849 1 NC_008596.1 identified by match to protein family HMM PF00501; AMP-dependent synthetase/ligase 5717849 4533420 MSMEG_5631 Mycobacterium smegmatis str. MC2 155 AMP-dependent synthetase/ligase YP_889865.1 5716317 D 246196 CDS YP_889866.1 118467429 4536045 5717850..5718623 1 NC_008596.1 identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 5718623 4536045 MSMEG_5632 Mycobacterium smegmatis str. MC2 155 oxidoreductase, short chain dehydrogenase/reductase YP_889866.1 5717850 D 246196 CDS YP_889867.1 118472689 4531657 5718620..5720092 1 NC_008596.1 identified by match to protein family HMM PF00501; feruloyl-CoA synthetase 5720092 4531657 MSMEG_5633 Mycobacterium smegmatis str. MC2 155 feruloyl-CoA synthetase YP_889867.1 5718620 D 246196 CDS YP_889868.1 118472140 4532477 complement(5720095..5720538) 1 NC_008596.1 hypothetical protein 5720538 4532477 MSMEG_5634 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889868.1 5720095 R 246196 CDS YP_889869.1 118470721 4533936 complement(5720548..5720736) 1 NC_008596.1 hypothetical protein 5720736 4533936 MSMEG_5635 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889869.1 5720548 R 246196 CDS YP_889870.1 118470206 4532500 complement(5720762..5723137) 1 NC_008596.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; P-type ATPase - metal cation transport 5723137 4532500 MSMEG_5636 Mycobacterium smegmatis str. MC2 155 P-type ATPase - metal cation transport YP_889870.1 5720762 R 246196 CDS YP_889871.1 118470511 4537564 complement(5723151..5724767) 1 NC_008596.1 identified by match to protein family HMM PF00144; penicillin-binding protein 4 5724767 4537564 MSMEG_5637 Mycobacterium smegmatis str. MC2 155 penicillin-binding protein 4 YP_889871.1 5723151 R 246196 CDS YP_889872.1 118468401 4534790 complement(5724814..5725929) 1 NC_008596.1 metallo-beta-lactamase 5725929 4534790 MSMEG_5638 Mycobacterium smegmatis str. MC2 155 metallo-beta-lactamase YP_889872.1 5724814 R 246196 CDS YP_889873.1 118471625 4536499 complement(5725931..5726662) 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 5726662 4536499 MSMEG_5639 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_889873.1 5725931 R 246196 CDS YP_889874.1 118473515 4533877 complement(5726689..5728815) 1 NC_008596.1 identified by match to protein family HMM PF06202; amylo-alpha-1,6-glucosidase 5728815 4533877 MSMEG_5640 Mycobacterium smegmatis str. MC2 155 amylo-alpha-1,6-glucosidase YP_889874.1 5726689 R 246196 CDS YP_889875.1 118472814 4536668 complement(5728812..5729963) 1 NC_008596.1 identified by match to protein family HMM PF00534; glycoside hydrolase family protein 5729963 4536668 MSMEG_5641 Mycobacterium smegmatis str. MC2 155 glycoside hydrolase family protein YP_889875.1 5728812 R 246196 CDS YP_889876.1 118467761 4533392 5730092..5731561 1 NC_008596.1 identified by match to protein family HMM PF01039; acetyl-coenzyme a carboxylase carboxyl transferase 5731561 4533392 MSMEG_5642 Mycobacterium smegmatis str. MC2 155 acetyl-coenzyme a carboxylase carboxyl transferase YP_889876.1 5730092 D 246196 CDS YP_889877.1 118471729 4536415 5731669..5732505 1 NC_008596.1 hypothetical protein 5732505 4536415 MSMEG_5643 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889877.1 5731669 D 246196 CDS YP_889878.1 118469787 4535811 complement(5732558..5734564) 1 NC_008596.1 identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062; membrane protein 5734564 4535811 MSMEG_5644 Mycobacterium smegmatis str. MC2 155 membrane protein YP_889878.1 5732558 R 246196 CDS YP_889879.1 118468763 4534252 complement(5734567..5735295) 1 NC_008596.1 hypothetical protein 5735295 4534252 MSMEG_5645 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889879.1 5734567 R 246196 CDS YP_889880.1 118472851 4537447 5735881..5736054 1 NC_008596.1 hypothetical protein 5736054 4537447 MSMEG_5646 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889880.1 5735881 D 246196 CDS YP_889881.1 118471782 4536353 complement(5736936..5737325) 1 NC_008596.1 hypothetical protein 5737325 4536353 MSMEG_5648 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889881.1 5736936 R 246196 CDS YP_889882.1 118467988 4531308 complement(5737445..5739058) 1 NC_008596.1 activates fatty acids by binding to coenzyme A; AMP-binding protein 5739058 4531308 MSMEG_5649 Mycobacterium smegmatis str. MC2 155 AMP-binding protein YP_889882.1 5737445 R 246196 CDS YP_889883.1 118470449 4534512 complement(5739055..5740743) 1 NC_008596.1 identified by match to protein family HMM PF00501; AMP-dependent synthetase/ligase 5740743 4534512 MSMEG_5650 Mycobacterium smegmatis str. MC2 155 AMP-dependent synthetase/ligase YP_889883.1 5739055 R 246196 CDS YP_889884.1 118471751 4536398 5740801..5741643 1 NC_008596.1 identified by match to protein family HMM PF00196; LuxR family transcriptional regulator 5741643 4536398 MSMEG_5651 Mycobacterium smegmatis str. MC2 155 LuxR family transcriptional regulator YP_889884.1 5740801 D 246196 CDS YP_889885.1 118470763 4533666 complement(5741657..5742577) 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 5742577 4533666 MSMEG_5652 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_889885.1 5741657 R 246196 CDS YP_889886.1 118468482 4537671 5742793..5743662 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 5743662 4537671 MSMEG_5654 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_889886.1 5742793 D 246196 CDS YP_889887.1 118470641 4532400 complement(5743637..5745124) 1 NC_008596.1 identified by match to protein family HMM PF02133; cytosine/purines uracil thiamine allantoin permease 5745124 4532400 MSMEG_5653 Mycobacterium smegmatis str. MC2 155 cytosine/purines uracil thiamine allantoin permease YP_889887.1 5743637 R 246196 CDS YP_889888.1 118468846 4535619 complement(5745137..5745982) 1 NC_008596.1 identified by match to protein family HMM PF00795; carbon-nitrogen hydrolase 5745982 4535619 MSMEG_5655 Mycobacterium smegmatis str. MC2 155 carbon-nitrogen hydrolase YP_889888.1 5745137 R 246196 CDS YP_889889.1 118469650 4535060 complement(5745996..5747351) 1 NC_008596.1 identified by match to protein family HMM PF00815; histidinol dehydrogenase 5747351 hisD 4535060 hisD Mycobacterium smegmatis str. MC2 155 histidinol dehydrogenase YP_889889.1 5745996 R 246196 CDS YP_889890.1 118470967 4534539 complement(5747436..5748392) 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 5748392 4534539 MSMEG_5657 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_889890.1 5747436 R 246196 CDS YP_889891.1 118470132 4534503 5748411..5749523 1 NC_008596.1 identified by match to protein family HMM PF00561; match to protein family HMM PF06441; epoxide hydrolase 5749523 4534503 MSMEG_5658 Mycobacterium smegmatis str. MC2 155 epoxide hydrolase YP_889891.1 5748411 D 246196 CDS YP_889892.1 118469658 4535068 complement(5749605..5751437) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 5751437 4535068 MSMEG_5659 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_889892.1 5749605 R 246196 CDS YP_889893.1 118469711 4537216 complement(5751434..5753386) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 5753386 4537216 MSMEG_5660 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_889893.1 5751434 R 246196 CDS YP_889894.1 118468521 4535346 complement(5753419..5755335) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 5755335 4535346 MSMEG_5661 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_889894.1 5753419 R 246196 CDS YP_889895.1 118468513 4535494 5755451..5756161 1 NC_008596.1 identified by similarity to SP:Q10531; match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator PrrA 5756161 prrA 4535494 prrA Mycobacterium smegmatis str. MC2 155 DNA-binding response regulator PrrA YP_889895.1 5755451 D 246196 CDS YP_889896.1 118472850 4537446 5756171..5757511 1 NC_008596.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor-type histidine kinase PrrB 5757511 4537446 MSMEG_5663 Mycobacterium smegmatis str. MC2 155 sensor-type histidine kinase PrrB YP_889896.1 5756171 D 246196 CDS YP_889897.1 118472088 4537097 complement(5757592..5757954) 1 NC_008596.1 identified by match to protein family HMM PF00254; hypothetical protein 5757954 4537097 MSMEG_5664 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889897.1 5757592 R 246196 CDS YP_889898.1 118469392 4532286 complement(5757938..5758285) 1 NC_008596.1 hypothetical protein 5758285 4532286 MSMEG_5665 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889898.1 5757938 R 246196 CDS YP_889899.1 118472189 4533727 5757986..5758234 1 NC_008596.1 hypothetical protein 5758234 4533727 MSMEG_5666 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889899.1 5757986 D 246196 CDS YP_889900.1 118469367 4535881 5758241..5759800 1 NC_008596.1 phytoene dehydrogenase 5759800 4535881 MSMEG_5667 Mycobacterium smegmatis str. MC2 155 phytoene dehydrogenase YP_889900.1 5758241 D 246196 CDS YP_889901.1 118467413 4535835 5759843..5760928 1 NC_008596.1 identified by similarity to GB:CAD18826.1; ISMsm2, transposase 5760928 4535835 MSMEG_5669 Mycobacterium smegmatis str. MC2 155 ISMsm2, transposase YP_889901.1 5759843 D 246196 CDS YP_889902.1 118470208 4532502 complement(5760925..5761374) 1 NC_008596.1 identified by match to protein family HMM PF01047; transcriptional regulator 5761374 4532502 MSMEG_5668 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_889902.1 5760925 R 246196 CDS YP_889903.1 118467391 4533862 complement(5761364..5762821) 1 NC_008596.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; efflux membrane protein 5762821 4533862 MSMEG_5670 Mycobacterium smegmatis str. MC2 155 efflux membrane protein YP_889903.1 5761364 R 246196 CDS YP_889904.1 118473827 4531981 5762879..5763358 1 NC_008596.1 identified by match to protein family HMM PF04073; prolyl-tRNA synthetase 5763358 4531981 MSMEG_5671 Mycobacterium smegmatis str. MC2 155 prolyl-tRNA synthetase YP_889904.1 5762879 D 246196 CDS YP_889905.1 118470491 4537175 complement(5763378..5764682) 1 NC_008596.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 5764682 gltA 4537175 gltA Mycobacterium smegmatis str. MC2 155 type II citrate synthase YP_889905.1 5763378 R 246196 CDS YP_889906.1 118470149 4531708 complement(5764801..5765442) 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 5765442 4531708 MSMEG_5673 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_889906.1 5764801 R 246196 CDS YP_889907.1 118471059 4537132 complement(5765508..5766815) 1 NC_008596.1 identified by match to protein family HMM PF05977; match to protein family HMM PF07690; membrane transporter 5766815 4537132 MSMEG_5674 Mycobacterium smegmatis str. MC2 155 membrane transporter YP_889907.1 5765508 R 246196 CDS YP_889908.1 118467517 4535528 complement(5766819..5767511) 1 NC_008596.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 5767511 pdxH 4535528 pdxH Mycobacterium smegmatis str. MC2 155 pyridoxamine 5'-phosphate oxidase YP_889908.1 5766819 R 246196 CDS YP_889909.1 118473224 4536910 5767553..5768686 1 NC_008596.1 forms citrate from oxaloacetate and acetyl-CoA; functions in TCA cycle; citrate synthase 2 5768686 4536910 MSMEG_5676 Mycobacterium smegmatis str. MC2 155 citrate synthase 2 YP_889909.1 5767553 D 246196 CDS YP_889910.1 118469244 4535380 5768683..5769285 1 NC_008596.1 hypothetical protein 5769285 4535380 MSMEG_5677 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889910.1 5768683 D 246196 CDS YP_889911.1 118468821 4534077 complement(5769287..5769673) 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase/bleomycin resistance protein/dioxygenase 5769673 4534077 MSMEG_5678 Mycobacterium smegmatis str. MC2 155 glyoxalase/bleomycin resistance protein/dioxygenase YP_889911.1 5769287 R 246196 CDS YP_889912.1 118469209 4533263 complement(5769670..5769984) 1 NC_008596.1 DNA-binding protein 5769984 4533263 MSMEG_5679 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_889912.1 5769670 R 246196 CDS YP_889913.1 118469946 4530909 5770134..5770589 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase 5770589 4530909 MSMEG_5680 Mycobacterium smegmatis str. MC2 155 glyoxalase YP_889913.1 5770134 D 246196 CDS YP_889914.1 118467681 4536947 complement(5770593..5772266) 1 NC_008596.1 identified by match to protein family HMM PF00037; match to protein family HMM PF07992; ferredoxin/ferredoxin--NADP reductase 5772266 4536947 MSMEG_5681 Mycobacterium smegmatis str. MC2 155 ferredoxin/ferredoxin--NADP reductase YP_889914.1 5770593 R 246196 CDS YP_889915.1 118469615 4531587 complement(5772279..5773256) 1 NC_008596.1 hypothetical protein 5773256 4531587 MSMEG_5682 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889915.1 5772279 R 246196 CDS YP_889916.1 118468475 4537296 5773416..5774180 1 NC_008596.1 identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase 5774180 map 4537296 map Mycobacterium smegmatis str. MC2 155 methionine aminopeptidase YP_889916.1 5773416 D 246196 CDS YP_889917.1 118467446 4535455 5774274..5775386 1 NC_008596.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 5775386 4535455 MSMEG_5684 Mycobacterium smegmatis str. MC2 155 phosphoserine aminotransferase YP_889917.1 5774274 D 246196 CDS YP_889918.1 118468246 4537431 5775478..5776308 1 NC_008596.1 DNA-binding protein 5776308 4537431 MSMEG_5685 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_889918.1 5775478 D 246196 CDS YP_889919.1 118468074 4533021 complement(5776322..5776597) 1 NC_008596.1 hypothetical protein 5776597 4533021 MSMEG_5686 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889919.1 5776322 R 246196 CDS YP_889920.1 118469110 4535303 complement(5776618..5777451) 1 NC_008596.1 identified by match to protein family HMM PF00588; 23s ribosomal RNA methyltransferase 5777451 4535303 MSMEG_5687 Mycobacterium smegmatis str. MC2 155 23s ribosomal RNA methyltransferase YP_889920.1 5776618 R 246196 CDS YP_889921.1 118472093 4537102 complement(5777448..5777879) 1 NC_008596.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 5777879 4537102 MSMEG_5688 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_889921.1 5777448 R 246196 CDS YP_889922.1 118473017 4532338 5777961..5778230 1 NC_008596.1 hypothetical protein 5778230 4532338 MSMEG_5689 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889922.1 5777961 D 246196 CDS YP_889923.1 118474024 4533437 5778239..5778691 1 NC_008596.1 hypothetical protein 5778691 4533437 MSMEG_5690 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889923.1 5778239 D 246196 CDS YP_889924.1 118473623 4531019 complement(5778712..5779497) 1 NC_008596.1 hypothetical protein 5779497 4531019 MSMEG_5691 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889924.1 5778712 R 246196 CDS YP_889925.1 118467639 4534214 complement(5779494..5779880) 1 NC_008596.1 hypothetical protein 5779880 4534214 MSMEG_5692 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889925.1 5779494 R 246196 CDS YP_889926.1 118471356 4533240 5779698..5781245 1 NC_008596.1 identified by match to protein family HMM PF07690; transporter major facilitator family protein 5781245 4533240 MSMEG_5693 Mycobacterium smegmatis str. MC2 155 transporter major facilitator family protein YP_889926.1 5779698 D 246196 CDS YP_889927.1 118471214 4533816 5781242..5781730 1 NC_008596.1 hypothetical protein 5781730 4533816 MSMEG_5694 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889927.1 5781242 D 246196 CDS YP_889928.1 118469116 4535329 complement(5781741..5782766) 1 NC_008596.1 glutathione S-transferase 5782766 4535329 MSMEG_5695 Mycobacterium smegmatis str. MC2 155 glutathione S-transferase YP_889928.1 5781741 R 246196 CDS YP_889929.1 118468185 4534399 complement(5782812..5783261) 1 NC_008596.1 identified by match to protein family HMM PF00313; cold-shock DNA-binding domain-containing protein 5783261 4534399 MSMEG_5696 Mycobacterium smegmatis str. MC2 155 cold-shock DNA-binding domain-containing protein YP_889929.1 5782812 R 246196 CDS YP_889930.1 118472716 4531685 5783385..5783795 1 NC_008596.1 identified by match to protein family HMM PF03733; hypothetical protein 5783795 4531685 MSMEG_5697 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889930.1 5783385 D 246196 CDS YP_889931.1 118473671 4531242 5783792..5784877 1 NC_008596.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 5784877 moaA 4531242 moaA Mycobacterium smegmatis str. MC2 155 molybdenum cofactor biosynthesis protein A YP_889931.1 5783792 D 246196 CDS YP_889932.1 118472944 4531760 5784902..5785144 1 NC_008596.1 identified by match to protein family HMM PF02597; ThiS family protein 5785144 4531760 MSMEG_5699 Mycobacterium smegmatis str. MC2 155 ThiS family protein YP_889932.1 5784902 D 246196 CDS YP_889933.1 118472292 4532764 5785578..5787038 1 NC_008596.1 identified by match to protein family HMM PF06737; hypothetical protein 5787038 4532764 MSMEG_5700 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889933.1 5785578 D 246196 CDS YP_889934.1 118471265 4532139 complement(5787056..5787484) 1 NC_008596.1 identified by match to protein family HMM PF02391; molybdopterin converting factor subunit 2 5787484 moaE 4532139 moaE Mycobacterium smegmatis str. MC2 155 molybdopterin converting factor subunit 2 YP_889934.1 5787056 R 246196 CDS YP_889935.1 118470262 4537154 complement(5787521..5788018) 1 NC_008596.1 identified by match to protein family HMM PF00994; match to protein family HMM TIGR00177; molybdenum cofactor synthesis domain-containing protein 5788018 4537154 MSMEG_5702 Mycobacterium smegmatis str. MC2 155 molybdenum cofactor synthesis domain-containing protein YP_889935.1 5787521 R 246196 CDS YP_889936.1 118469686 4536819 complement(5787997..5788470) 1 NC_008596.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 5788470 moaC 4536819 moaC Mycobacterium smegmatis str. MC2 155 molybdenum cofactor biosynthesis protein MoaC YP_889936.1 5787997 R 246196 CDS YP_889937.1 118469962 4530925 complement(5788473..5788670) 1 NC_008596.1 hypothetical protein 5788670 4530925 MSMEG_5704 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889937.1 5788473 R 246196 CDS YP_889938.1 118468255 4533988 5788729..5790984 1 NC_008596.1 hypothetical protein 5790984 4533988 MSMEG_5705 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889938.1 5788729 D 246196 CDS YP_889939.1 118468039 4531396 5791025..5792782 1 NC_008596.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; DNA or RNA helicase of superfamily protein II 5792782 4531396 MSMEG_5706 Mycobacterium smegmatis str. MC2 155 DNA or RNA helicase of superfamily protein II YP_889939.1 5791025 D 246196 CDS YP_889940.1 118472920 4531209 complement(5792803..5793156) 1 NC_008596.1 identified by match to protein family HMM PF07883; cupin 5793156 4531209 MSMEG_5707 Mycobacterium smegmatis str. MC2 155 cupin YP_889940.1 5792803 R 246196 CDS YP_889941.1 118471916 4536217 complement(5793234..5793848) 1 NC_008596.1 hypothetical protein 5793848 4536217 MSMEG_5708 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889941.1 5793234 R 246196 CDS YP_889942.1 118470902 4537576 complement(5793898..5794431) 1 NC_008596.1 hypothetical protein 5794431 4537576 MSMEG_5709 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889942.1 5793898 R 246196 CDS YP_889943.1 118473652 4533520 complement(5794807..5795331) 1 NC_008596.1 hypothetical protein 5795331 4533520 MSMEG_5710 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889943.1 5794807 R 246196 CDS YP_889944.1 118471338 4534851 complement(5795681..5796355) 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 5796355 4534851 MSMEG_5711 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_889944.1 5795681 R 246196 CDS YP_889945.1 118470406 4534179 5796496..5797728 1 NC_008596.1 identified by match to protein family HMM PF06779; match to protein family HMM PF07690; major facilitator family protein transporter 5797728 4534179 MSMEG_5713 Mycobacterium smegmatis str. MC2 155 major facilitator family protein transporter YP_889945.1 5796496 D 246196 CDS YP_889946.1 118467995 4531315 complement(5797558..5798490) 1 NC_008596.1 identified by match to protein family HMM PF00126; LysR family transcriptional regulator 5798490 4531315 MSMEG_5712 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_889946.1 5797558 R 246196 CDS YP_889947.1 118467487 4537005 5798619..5799317 1 NC_008596.1 identified by match to protein family HMM PF00106; short-chain dehydrogenase/reductase SDR 5799317 4537005 MSMEG_5714 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase SDR YP_889947.1 5798619 D 246196 CDS YP_889948.1 118468537 4535362 5799304..5799669 1 NC_008596.1 hypothetical protein 5799669 4535362 MSMEG_5716 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889948.1 5799304 D 246196 CDS YP_889949.1 118469046 4536860 complement(5799650..5800642) 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 5800642 4536860 MSMEG_5715 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889949.1 5799650 R 246196 CDS YP_889950.1 118469981 4535755 5800752..5801177 1 NC_008596.1 identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 5801177 4535755 MSMEG_5717 Mycobacterium smegmatis str. MC2 155 pyridoxamine 5'-phosphate oxidase YP_889950.1 5800752 D 246196 CDS YP_889951.1 118472212 4531462 complement(5801244..5801774) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5801774 4531462 MSMEG_5718 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_889951.1 5801244 R 246196 CDS YP_889952.1 118473182 4532584 5801864..5803072 1 NC_008596.1 identified by match to protein family HMM PF01494; oxidoreductase 5803072 4532584 MSMEG_5719 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_889952.1 5801864 D 246196 CDS YP_889953.1 118473807 4531617 complement(5803163..5805325) 1 NC_008596.1 identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; 3-hydroxyacyl-CoA dehydrogenase 5805325 4531617 MSMEG_5720 Mycobacterium smegmatis str. MC2 155 3-hydroxyacyl-CoA dehydrogenase YP_889953.1 5803163 R 246196 CDS YP_889954.1 118469973 4535747 complement(5805343..5806554) 1 NC_008596.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 5806554 4535747 MSMEG_5721 Mycobacterium smegmatis str. MC2 155 acetyl-CoA acetyltransferase YP_889954.1 5805343 R 246196 CDS YP_889955.1 118472298 4532770 complement(5806701..5806889) 1 NC_008596.1 hypothetical protein 5806889 4532770 MSMEG_5722 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889955.1 5806701 R 246196 CDS YP_889956.1 118471355 4533239 complement(5807129..5807560) 1 NC_008596.1 identified by match to protein family HMM PF01042; endoribonuclease L-psp family protein 5807560 4533239 MSMEG_5723 Mycobacterium smegmatis str. MC2 155 endoribonuclease L-psp family protein YP_889956.1 5807129 R 246196 CDS YP_889957.1 118472343 4534234 5807649..5808116 1 NC_008596.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 5808116 4534234 MSMEG_5724 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_889957.1 5807649 D 246196 CDS YP_889958.1 118467611 4533073 5808140..5809312 1 NC_008596.1 identified by match to protein family HMM PF00155; match to protein family HMM PF01212; aminotransferase 5809312 4533073 MSMEG_5725 Mycobacterium smegmatis str. MC2 155 aminotransferase YP_889958.1 5808140 D 246196 CDS YP_889959.1 118467418 4536034 5809341..5810558 1 NC_008596.1 hypothetical protein 5810558 4536034 MSMEG_5726 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889959.1 5809341 D 246196 CDS YP_889960.1 118470580 4531367 5810572..5811534 1 NC_008596.1 catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase 5811534 alc 4531367 alc Mycobacterium smegmatis str. MC2 155 allantoicase YP_889960.1 5810572 D 246196 CDS YP_889961.1 118473673 4531244 5811531..5812430 1 NC_008596.1 identified by match to protein family HMM PF01522; polysaccharide deacetylase 5812430 4531244 MSMEG_5728 Mycobacterium smegmatis str. MC2 155 polysaccharide deacetylase YP_889961.1 5811531 D 246196 CDS YP_889962.1 118472825 4537049 complement(5812505..5813212) 1 NC_008596.1 identified by match to protein family HMM PF01177; hydantoin racemase 5813212 4537049 MSMEG_5729 Mycobacterium smegmatis str. MC2 155 hydantoin racemase YP_889962.1 5812505 R 246196 CDS YP_889963.1 118468743 4534271 complement(5813209..5814771) 1 NC_008596.1 identified by match to protein family HMM PF02133; permease for cytosine/purines, uracil, thiamine, allantoin transporter 5814771 4534271 MSMEG_5730 Mycobacterium smegmatis str. MC2 155 permease for cytosine/purines, uracil, thiamine, allantoin transporter YP_889963.1 5813209 R 246196 CDS YP_889964.1 118468229 4537044 complement(5814846..5815541) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 5815541 4537044 MSMEG_5731 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_889964.1 5814846 R 246196 CDS YP_889965.1 118470759 4533662 complement(5815587..5816507) 1 NC_008596.1 identified by match to protein family HMM PF00296; monooxygenase 5816507 4533662 MSMEG_5732 Mycobacterium smegmatis str. MC2 155 monooxygenase YP_889965.1 5815587 R 246196 CDS YP_889966.1 118473140 4531201 complement(5816547..5817425) 1 NC_008596.1 identified by match to protein family HMM PF00582; universal stress protein family protein 5817425 4531201 MSMEG_5733 Mycobacterium smegmatis str. MC2 155 universal stress protein family protein YP_889966.1 5816547 R 246196 CDS YP_889967.1 118471931 4536193 complement(5817499..5818581) 1 NC_008596.1 identified by match to protein family HMM PF02515; alpha-methylacyl-CoA racemase 5818581 4536193 MSMEG_5734 Mycobacterium smegmatis str. MC2 155 alpha-methylacyl-CoA racemase YP_889967.1 5817499 R 246196 CDS YP_889968.1 118470767 4533670 5818600..5820267 1 NC_008596.1 identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; indole-3-pyruvate decarboxylase 5820267 4533670 MSMEG_5735 Mycobacterium smegmatis str. MC2 155 indole-3-pyruvate decarboxylase YP_889968.1 5818600 D 246196 CDS YP_889969.1 118471284 4532178 complement(5820278..5820718) 1 NC_008596.1 identified by match to protein family HMM PF03364; cyclase/dehydrase 5820718 4532178 MSMEG_5736 Mycobacterium smegmatis str. MC2 155 cyclase/dehydrase YP_889969.1 5820278 R 246196 CDS YP_889970.1 118468707 4534697 5820751..5821098 1 NC_008596.1 hypothetical protein 5821098 4534697 MSMEG_5738 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889970.1 5820751 D 246196 CDS YP_889971.1 118468279 4535766 complement(5821095..5821262) 1 NC_008596.1 hypothetical protein 5821262 4535766 MSMEG_5737 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889971.1 5821095 R 246196 CDS YP_889972.1 118469671 4535433 5821317..5824838 1 NC_008596.1 identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746; long-chain fatty-acid--CoA ligase 5824838 4535433 MSMEG_5739 Mycobacterium smegmatis str. MC2 155 long-chain fatty-acid--CoA ligase YP_889972.1 5821317 D 246196 CDS YP_889973.1 118468154 4532697 complement(5824860..5825105) 1 NC_008596.1 hypothetical protein 5825105 4532697 MSMEG_5740 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889973.1 5824860 R 246196 CDS YP_889974.1 118474006 4530966 complement(5825153..5825788) 1 NC_008596.1 identified by match to protein family HMM PF02698; hypothetical protein 5825788 4530966 MSMEG_5741 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889974.1 5825153 R 246196 CDS YP_889975.1 118469293 4532632 complement(5825819..5826817) 1 NC_008596.1 identified by match to protein family HMM PF01553; acyltransferase domain-containing protein 5826817 4532632 MSMEG_5742 Mycobacterium smegmatis str. MC2 155 acyltransferase domain-containing protein YP_889975.1 5825819 R 246196 CDS YP_889976.1 118469544 4537118 complement(5826814..5827632) 1 NC_008596.1 identified by match to protein family HMM PF01734; patatin 5827632 4537118 MSMEG_5743 Mycobacterium smegmatis str. MC2 155 patatin YP_889976.1 5826814 R 246196 CDS YP_889977.1 118470231 4533922 complement(5827650..5827940) 1 NC_008596.1 identified by match to protein family HMM PF05121; gas vesicle protein K 5827940 gvpK 4533922 gvpK Mycobacterium smegmatis str. MC2 155 gas vesicle protein K YP_889977.1 5827650 R 246196 CDS YP_889978.1 118473364 4530840 complement(5827940..5828140) 1 NC_008596.1 identified by match to protein family HMM PF00741; gas vesicle synthesis protein 5828140 4530840 MSMEG_5745 Mycobacterium smegmatis str. MC2 155 gas vesicle synthesis protein YP_889978.1 5827940 R 246196 CDS YP_889979.1 118468971 4533535 complement(5828137..5828853) 1 NC_008596.1 identified by match to protein family HMM PF06386; gas vesicle protein 5828853 4533535 MSMEG_5746 Mycobacterium smegmatis str. MC2 155 gas vesicle protein YP_889979.1 5828137 R 246196 CDS YP_889980.1 118472467 4533833 complement(5828870..5829433) 1 NC_008596.1 hypothetical protein 5829433 4533833 MSMEG_5747 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889980.1 5828870 R 246196 CDS YP_889981.1 118474036 4531716 complement(5829490..5830131) 1 NC_008596.1 hypothetical protein 5830131 4531716 MSMEG_5748 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889981.1 5829490 R 246196 CDS YP_889982.1 118471218 4533821 complement(5830140..5830304) 1 NC_008596.1 hypothetical protein 5830304 4533821 MSMEG_5749 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889982.1 5830140 R 246196 CDS YP_889983.1 118469429 4534325 complement(5830307..5830420) 1 NC_008596.1 hypothetical protein 5830420 4534325 MSMEG_5750 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889983.1 5830307 R 246196 CDS YP_889984.1 118468195 4534409 complement(5830537..5830830) 1 NC_008596.1 adhesin 5830830 4534409 MSMEG_5751 Mycobacterium smegmatis str. MC2 155 adhesin YP_889984.1 5830537 R 246196 CDS YP_889985.1 118467492 4537379 5831541..5832110 1 NC_008596.1 identified by match to protein family HMM PF00149; serine/threonine specific protein phosphatase 5832110 4537379 MSMEG_5753 Mycobacterium smegmatis str. MC2 155 serine/threonine specific protein phosphatase YP_889985.1 5831541 D 246196 CDS YP_889986.1 118469368 4535882 complement(5832107..5832586) 1 NC_008596.1 hypothetical protein 5832586 4535882 MSMEG_5752 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889986.1 5832107 R 246196 CDS YP_889987.1 118470300 4533358 5832749..5833963 1 NC_008596.1 identified by match to protein family HMM PF00589; gp41 protein 5833963 4533358 MSMEG_5754 Mycobacterium smegmatis str. MC2 155 gp41 protein YP_889987.1 5832749 D 246196 CDS YP_889988.1 118473854 4533554 complement(5834677..5835828) 1 NC_008596.1 PE family protein 5835828 4533554 MSMEG_5759 Mycobacterium smegmatis str. MC2 155 PE family protein YP_889988.1 5834677 R 246196 CDS YP_889989.1 118467377 4533848 5836135..5837526 1 NC_008596.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator 5837526 4533848 MSMEG_5760 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_889989.1 5836135 D 246196 CDS YP_889990.1 118473098 4531159 5837607..5838014 1 NC_008596.1 identified by match to protein family HMM PF07883; cupin 5838014 4531159 MSMEG_5761 Mycobacterium smegmatis str. MC2 155 cupin YP_889990.1 5837607 D 246196 CDS YP_889991.1 118471993 4536140 5838020..5838943 1 NC_008596.1 identified by match to protein family HMM PF00107; zinc-binding oxidoreductase 5838943 4536140 MSMEG_5762 Mycobacterium smegmatis str. MC2 155 zinc-binding oxidoreductase YP_889991.1 5838020 D 246196 CDS YP_889992.1 118468410 4534552 5838945..5839619 1 NC_008596.1 hypothetical protein 5839619 4534552 MSMEG_5763 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889992.1 5838945 D 246196 CDS YP_889993.1 118467528 4535539 5839631..5840230 1 NC_008596.1 identified by match to protein family HMM PF01966; cyanamide hydratase 5840230 4535539 MSMEG_5764 Mycobacterium smegmatis str. MC2 155 cyanamide hydratase YP_889993.1 5839631 D 246196 CDS YP_889994.1 118468675 4535898 complement(5840238..5840603) 1 NC_008596.1 identified by match to protein family HMM PF01152; globin 5840603 4535898 MSMEG_5765 Mycobacterium smegmatis str. MC2 155 globin YP_889994.1 5840238 R 246196 CDS YP_889995.1 118467924 4532657 5840791..5841132 1 NC_008596.1 identified by match to protein family HMM PF05305; hypothetical protein 5841132 4532657 MSMEG_5766 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889995.1 5840791 D 246196 CDS YP_889996.1 118473846 4533546 complement(5841139..5842152) 1 NC_008596.1 hypothetical protein 5842152 4533546 MSMEG_5767 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889996.1 5841139 R 246196 CDS YP_889997.1 118471962 4536186 5842231..5842815 1 NC_008596.1 hypothetical protein 5842815 4536186 MSMEG_5768 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889997.1 5842231 D 246196 CDS YP_889998.1 118472571 4534155 complement(5842827..5843261) 1 NC_008596.1 hypothetical protein 5843261 4534155 MSMEG_5769 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889998.1 5842827 R 246196 CDS YP_889999.1 118471825 4536318 complement(5843430..5843888) 1 NC_008596.1 hypothetical protein 5843888 4536318 MSMEG_5770 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_889999.1 5843430 R 246196 CDS YP_890000.1 118470207 4532501 complement(5843975..5844388) 1 NC_008596.1 hypothetical protein 5844388 4532501 MSMEG_5771 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890000.1 5843975 R 246196 CDS YP_890001.1 118469496 4533322 5844594..5845598 1 NC_008596.1 identified by match to protein family HMM PF03405; fatty acid desaturase 5845598 4533322 MSMEG_5773 Mycobacterium smegmatis str. MC2 155 fatty acid desaturase YP_890001.1 5844594 D 246196 CDS YP_890002.1 118472798 4533141 complement(5845429..5845887) 1 NC_008596.1 cytospin-A 5845887 4533141 MSMEG_5772 Mycobacterium smegmatis str. MC2 155 cytospin-A YP_890002.1 5845429 R 246196 CDS YP_890003.1 118473981 4531425 5845595..5846764 1 NC_008596.1 identified by match to protein family HMM PF01207; match to protein family HMM TIGR00737; tRNA-dihydrouridine synthase 5846764 4531425 MSMEG_5774 Mycobacterium smegmatis str. MC2 155 tRNA-dihydrouridine synthase YP_890003.1 5845595 D 246196 CDS YP_890004.1 118472157 4535683 5847201..5849369 1 NC_008596.1 identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; LytR/CpsA/Psr family protein 5849369 4535683 MSMEG_5775 Mycobacterium smegmatis str. MC2 155 LytR/CpsA/Psr family protein YP_890004.1 5847201 D 246196 CDS YP_890005.1 118469498 4533325 5849446..5850114 1 NC_008596.1 identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate transporter regulatory protein PhoU 5850114 phoU 4533325 phoU Mycobacterium smegmatis str. MC2 155 phosphate transporter regulatory protein PhoU YP_890005.1 5849446 D 246196 CDS YP_890006.1 118467952 4532063 complement(5850116..5850631) 1 NC_008596.1 identified by match to protein family HMM PF01047; transcriptional regulator 5850631 4532063 MSMEG_5777 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_890006.1 5850116 R 246196 CDS YP_890007.1 118471692 4536454 5850730..5851704 1 NC_008596.1 identified by match to protein family HMM PF00107; alcohol dehydrogenase 5851704 4536454 MSMEG_5778 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_890007.1 5850730 D 246196 CDS YP_890008.1 118470243 4536762 complement(5851717..5852493) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR00972; phosphate ABC transporter ATP-binding protein 5852493 pstB 4536762 pstB Mycobacterium smegmatis str. MC2 155 phosphate ABC transporter ATP-binding protein YP_890008.1 5851717 R 246196 CDS YP_890009.1 118470411 4534184 complement(5852502..5853428) 1 NC_008596.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease 5853428 pstA 4534184 pstA Mycobacterium smegmatis str. MC2 155 phosphate ABC transporter permease YP_890009.1 5852502 R 246196 CDS YP_890010.1 118467523 4535534 complement(5853425..5854480) 1 NC_008596.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter permease 5854480 pstC 4535534 pstC Mycobacterium smegmatis str. MC2 155 phosphate ABC transporter permease YP_890010.1 5853425 R 246196 CDS YP_890011.1 118468015 4533096 complement(5854529..5855665) 1 NC_008596.1 identified by match to protein family HMM PF01547; match to protein family HMM TIGR00975; phosphate ABC transporter substrate-binding protein 5855665 pstS 4533096 pstS Mycobacterium smegmatis str. MC2 155 phosphate ABC transporter substrate-binding protein YP_890011.1 5854529 R 246196 CDS YP_890012.1 118472805 4536659 complement(5856707..5857492) 1 NC_008596.1 identified by match to protein family HMM PF00486; transcriptional regulatory protein 5857492 4536659 MSMEG_5784 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_890012.1 5856707 R 246196 CDS YP_890013.1 118468523 4535348 5857658..5858473 1 NC_008596.1 hypothetical protein 5858473 4535348 MSMEG_5785 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890013.1 5857658 D 246196 CDS YP_890014.1 118472309 4532897 5858470..5858934 1 NC_008596.1 identified by match to protein family HMM PF00085; thiredoxin 5858934 4532897 MSMEG_5786 Mycobacterium smegmatis str. MC2 155 thiredoxin YP_890014.1 5858470 D 246196 CDS YP_890015.1 118468681 4535904 complement(5858967..5859149) 1 NC_008596.1 hypothetical protein 5859149 4535904 MSMEG_5787 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890015.1 5858967 R 246196 CDS YP_890016.1 118473083 4533158 5859148..5859627 1 NC_008596.1 integral membrane protein 5859627 4533158 MSMEG_5788 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_890016.1 5859148 D 246196 CDS YP_890017.1 118472788 4533131 5859664..5860497 1 NC_008596.1 identified by match to protein family HMM PF00581; thiosulfate sulfurtransferase 5860497 4533131 MSMEG_5789 Mycobacterium smegmatis str. MC2 155 thiosulfate sulfurtransferase YP_890017.1 5859664 D 246196 CDS YP_890018.1 118468699 4534689 5860529..5860801 1 NC_008596.1 identified by match to protein family HMM PF07210; SseC protein 5860801 4534689 MSMEG_5790 Mycobacterium smegmatis str. MC2 155 SseC protein YP_890018.1 5860529 D 246196 CDS YP_890019.1 118467470 4536615 5860943..5861041 1 NC_008596.1 hypothetical protein 5861041 4536615 MSMEG_5791 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890019.1 5860943 D 246196 CDS YP_890020.1 118467781 4535702 5861038..5861694 1 NC_008596.1 hypothetical protein 5861694 4535702 MSMEG_5792 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890020.1 5861038 D 246196 CDS YP_890021.1 118467894 4531250 5861703..5861984 1 NC_008596.1 hypothetical protein 5861984 4531250 MSMEG_5793 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890021.1 5861703 D 246196 CDS YP_890022.1 118469705 4537210 5862063..5862440 1 NC_008596.1 hypothetical protein 5862440 4537210 MSMEG_5794 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890022.1 5862063 D 246196 CDS YP_890023.1 118471431 4532814 complement(5862693..5863562) 1 NC_008596.1 catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase 5863562 4532814 MSMEG_5795 Mycobacterium smegmatis str. MC2 155 4-amino-4-deoxychorismate lyase YP_890023.1 5862693 R 246196 CDS YP_890024.1 118473812 4531622 5863663..5864742 1 NC_008596.1 identified by match to protein family HMM PF01571; glycine cleavage T-protein (aminomethyl transferase) 5864742 4531622 MSMEG_5796 Mycobacterium smegmatis str. MC2 155 glycine cleavage T-protein (aminomethyl transferase) YP_890024.1 5863663 D 246196 CDS YP_890025.1 118474002 4530962 5865007..5865180 1 NC_008596.1 hypothetical protein 5865180 4530962 MSMEG_5797 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890025.1 5865007 D 246196 CDS YP_890026.1 118467597 4531413 complement(5865211..5866293) 1 NC_008596.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 5866293 purM 4531413 purM Mycobacterium smegmatis str. MC2 155 phosphoribosylaminoimidazole synthetase YP_890026.1 5865211 R 246196 CDS YP_890027.1 118467633 4534208 5866339..5867736 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; nucleoside-diphosphate-sugar epimerase 5867736 4534208 MSMEG_5799 Mycobacterium smegmatis str. MC2 155 nucleoside-diphosphate-sugar epimerase YP_890027.1 5866339 D 246196 CDS YP_890028.1 118469058 4537244 complement(5867744..5869279) 1 NC_008596.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 5869279 purF 4537244 purF Mycobacterium smegmatis str. MC2 155 amidophosphoribosyltransferase YP_890028.1 5867744 R 246196 CDS YP_890029.1 118471543 4537624 complement(5869361..5870710) 1 NC_008596.1 identified by match to protein family HMM PF01494; hydroxylase 5870710 4537624 MSMEG_5801 Mycobacterium smegmatis str. MC2 155 hydroxylase YP_890029.1 5869361 R 246196 CDS YP_890030.1 118471827 4536320 5870893..5871624 1 NC_008596.1 identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 5871624 4536320 MSMEG_5802 Mycobacterium smegmatis str. MC2 155 oxidoreductase, short chain dehydrogenase/reductase YP_890030.1 5870893 D 246196 CDS YP_890031.1 118470574 4531517 5871708..5872067 1 NC_008596.1 hypothetical protein 5872067 4531517 MSMEG_5803 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890031.1 5871708 D 246196 CDS YP_890032.1 118469542 4537116 5872064..5872759 1 NC_008596.1 hypothetical protein 5872759 4537116 MSMEG_5804 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890032.1 5872064 D 246196 CDS YP_890033.1 118469845 4532736 5872756..5872902 1 NC_008596.1 hypothetical protein 5872902 4532736 MSMEG_5805 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890033.1 5872756 D 246196 CDS YP_890034.1 118471601 4536552 complement(5872991..5873104) 1 NC_008596.1 hypothetical protein 5873104 4536552 MSMEG_5806 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890034.1 5872991 R 246196 CDS YP_890035.1 118469956 4530919 5873134..5874081 1 NC_008596.1 identified by match to protein family HMM PF00005; D-methionine transport ATP-binding protein MetN 5874081 4530919 MSMEG_5807 Mycobacterium smegmatis str. MC2 155 D-methionine transport ATP-binding protein MetN YP_890035.1 5873134 D 246196 CDS YP_890036.1 118470624 4532982 5874133..5874816 1 NC_008596.1 identified by match to protein family HMM PF00528; binding-protein-dependent transporters inner membrane component 5874816 4532982 MSMEG_5808 Mycobacterium smegmatis str. MC2 155 binding-protein-dependent transporters inner membrane component YP_890036.1 5874133 D 246196 CDS YP_890037.1 118472278 4534804 5874832..5875731 1 NC_008596.1 identified by match to protein family HMM PF03180; lipoprotein YaeC 5875731 4534804 MSMEG_5809 Mycobacterium smegmatis str. MC2 155 lipoprotein YaeC YP_890037.1 5874832 D 246196 CDS YP_890038.1 118472626 4537276 5875728..5877137 1 NC_008596.1 monooxygenase 5877137 4537276 MSMEG_5810 Mycobacterium smegmatis str. MC2 155 monooxygenase YP_890038.1 5875728 D 246196 CDS YP_890039.1 118473629 4531025 complement(5877168..5877794) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5877794 4531025 MSMEG_5811 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890039.1 5877168 R 246196 CDS YP_890040.1 118467690 4537328 5877928..5878758 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 5878758 4537328 MSMEG_5812 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_890040.1 5877928 D 246196 CDS YP_890041.1 118468324 4533804 5878755..5879558 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; carveol dehydrogenase 5879558 4533804 MSMEG_5813 Mycobacterium smegmatis str. MC2 155 carveol dehydrogenase YP_890041.1 5878755 D 246196 CDS YP_890042.1 118472748 4531937 5879581..5880393 1 NC_008596.1 identified by match to protein family HMM PF02627; hypothetical protein 5880393 pcaC 4531937 pcaC Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890042.1 5879581 D 246196 CDS YP_890043.1 118468852 4535625 5880390..5881853 1 NC_008596.1 identified by match to protein family HMM PF00171; betaine aldehyde dehydrogenase 5881853 4535625 MSMEG_5815 Mycobacterium smegmatis str. MC2 155 betaine aldehyde dehydrogenase YP_890043.1 5880390 D 246196 CDS YP_890044.1 118468024 4533105 5882145..5883410 1 NC_008596.1 hypothetical protein 5883410 4533105 MSMEG_5816 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890044.1 5882145 D 246196 CDS YP_890045.1 118467735 4534018 complement(5883420..5883806) 1 NC_008596.1 hypothetical protein 5883806 4534018 MSMEG_5817 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890045.1 5883420 R 246196 CDS YP_890046.1 118471765 4536374 5883823..5885037 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 5885037 4536374 MSMEG_5818 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_890046.1 5883823 D 246196 CDS YP_890047.1 118468089 4536017 5885077..5885499 1 NC_008596.1 identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 5885499 4536017 MSMEG_5819 Mycobacterium smegmatis str. MC2 155 pyridoxamine 5'-phosphate oxidase YP_890047.1 5885077 D 246196 CDS YP_890048.1 118469339 4535929 5885520..5885951 1 NC_008596.1 hypothetical protein 5885951 4535929 MSMEG_5820 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890048.1 5885520 D 246196 CDS YP_890049.1 118470720 4533935 5885977..5887236 1 NC_008596.1 hypothetical protein 5887236 4533935 MSMEG_5822 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890049.1 5885977 D 246196 CDS YP_890050.1 118473845 4531999 complement(5887175..5887831) 1 NC_008596.1 identified by match to protein family HMM PF02517; caax amino protease 5887831 4531999 MSMEG_5821 Mycobacterium smegmatis str. MC2 155 caax amino protease YP_890050.1 5887175 R 246196 CDS YP_890051.1 118469140 4532556 complement(5887831..5889561) 1 NC_008596.1 transmembrane protein 5889561 4532556 MSMEG_5823 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_890051.1 5887831 R 246196 CDS YP_890052.1 118473588 4534861 complement(5889558..5891855) 1 NC_008596.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 5891855 purL 4534861 purL Mycobacterium smegmatis str. MC2 155 phosphoribosylformylglycinamidine synthase II YP_890052.1 5889558 R 246196 CDS YP_890053.1 118469798 4535939 complement(5891852..5893060) 1 NC_008596.1 identified by match to protein family HMM PF00999; Na+/H+ antiporter 5893060 4535939 MSMEG_5825 Mycobacterium smegmatis str. MC2 155 Na+/H+ antiporter YP_890053.1 5891852 R 246196 CDS YP_890054.1 118471412 4534888 5892606..5894912 1 NC_008596.1 identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; pyruvate decarboxylase 5894912 4534888 MSMEG_5826 Mycobacterium smegmatis str. MC2 155 pyruvate decarboxylase YP_890054.1 5892606 D 246196 CDS YP_890055.1 118467855 4532877 complement(5894923..5895273) 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase 5895273 4532877 MSMEG_5827 Mycobacterium smegmatis str. MC2 155 glyoxalase YP_890055.1 5894923 R 246196 CDS YP_890056.1 118471959 4536183 complement(5895289..5896554) 1 NC_008596.1 catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 5896554 4536183 MSMEG_5828 Mycobacterium smegmatis str. MC2 155 aminopeptidase YP_890056.1 5895289 R 246196 CDS YP_890057.1 118470932 4533980 5896604..5897635 1 NC_008596.1 identified by match to protein family HMM PF04261; match to protein family HMM TIGR01413; Dyp-type peroxidase 5897635 4533980 MSMEG_5829 Mycobacterium smegmatis str. MC2 155 Dyp-type peroxidase YP_890057.1 5896604 D 246196 CDS YP_890058.1 118470265 4537157 5897635..5898432 1 NC_008596.1 identified by match to protein family HMM PF04454; hypothetical protein 5898432 4537157 MSMEG_5830 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890058.1 5897635 D 246196 CDS YP_890059.1 118472513 4533743 complement(5898597..5899271) 1 NC_008596.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 5899271 purQ 4533743 purQ Mycobacterium smegmatis str. MC2 155 phosphoribosylformylglycinamidine synthase I YP_890059.1 5898597 R 246196 CDS YP_890060.1 118473802 4531281 complement(5899268..5899516) 1 NC_008596.1 With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; phosphoribosylformylglycinamidine synthase subunit PurS 5899516 purS 4531281 purS Mycobacterium smegmatis str. MC2 155 phosphoribosylformylglycinamidine synthase subunit PurS YP_890060.1 5899268 R 246196 CDS YP_890061.1 118468973 4533537 5900103..5900858 1 NC_008596.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 5900858 4533537 MSMEG_5834 Mycobacterium smegmatis str. MC2 155 metallo-beta-lactamase superfamily protein YP_890061.1 5900103 D 246196 CDS YP_890062.1 118469955 4530918 complement(5900871..5902514) 1 NC_008596.1 proposed role in polysaccahride synthesis; FAD-binding dehydrogenase 5902514 4530918 MSMEG_5835 Mycobacterium smegmatis str. MC2 155 FAD-binding dehydrogenase YP_890062.1 5900871 R 246196 CDS YP_890063.1 118467357 4534042 complement(5902536..5903252) 1 NC_008596.1 hypothetical protein 5903252 4534042 MSMEG_5836 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890063.1 5902536 R 246196 CDS YP_890064.1 118471326 4534839 complement(5903317..5903802) 1 NC_008596.1 identified by similarity to SP:P06610; match to protein family HMM PF00255; glutathione peroxidase 5903802 4534839 MSMEG_5837 Mycobacterium smegmatis str. MC2 155 glutathione peroxidase YP_890064.1 5903317 R 246196 CDS YP_890065.1 118473939 4533885 complement(5903822..5904367) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5904367 4533885 MSMEG_5838 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890065.1 5903822 R 246196 CDS YP_890066.1 118473334 4530993 5904456..5904905 1 NC_008596.1 hypothetical protein 5904905 4530993 MSMEG_5840 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890066.1 5904456 D 246196 CDS YP_890067.1 118470472 4536781 complement(5904831..5906987) 1 NC_008596.1 identified by match to protein family HMM PF00326; match to protein family HMM PF02897; protease 2 5906987 4536781 MSMEG_5839 Mycobacterium smegmatis str. MC2 155 protease 2 YP_890067.1 5904831 R 246196 CDS YP_890068.1 118471351 4533235 complement(5906984..5907883) 1 NC_008596.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 5907883 purC 4533235 purC Mycobacterium smegmatis str. MC2 155 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_890068.1 5906984 R 246196 CDS YP_890069.1 118469203 4535792 5907914..5908537 1 NC_008596.1 hypothetical protein 5908537 4535792 MSMEG_5842 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890069.1 5907914 D 246196 CDS YP_890070.1 118473562 4530996 5908629..5909528 1 NC_008596.1 hypothetical protein 5909528 4530996 MSMEG_5844 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890070.1 5908629 D 246196 CDS YP_890071.1 118468336 4532087 complement(5909473..5910120) 1 NC_008596.1 identified by match to protein family HMM PF08044; hypothetical protein 5910120 4532087 MSMEG_5843 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890071.1 5909473 R 246196 CDS YP_890072.1 118472438 4532055 complement(5910084..5911016) 1 NC_008596.1 C4-dicarboxylate transporter 5911016 4532055 MSMEG_5845 Mycobacterium smegmatis str. MC2 155 C4-dicarboxylate transporter YP_890072.1 5910084 R 246196 CDS YP_890073.1 118473273 4537703 complement(5910956..5912161) 1 NC_008596.1 identified by match to protein family HMM PF00067; NikQ protein 5912161 4537703 MSMEG_5846 Mycobacterium smegmatis str. MC2 155 NikQ protein YP_890073.1 5910956 R 246196 CDS YP_890074.1 118471019 4534475 complement(5912178..5913602) 1 NC_008596.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 5913602 purB 4534475 purB Mycobacterium smegmatis str. MC2 155 adenylosuccinate lyase YP_890074.1 5912178 R 246196 CDS YP_890075.1 118471774 4536345 5913636..5915339 1 NC_008596.1 identified by match to protein family HMM PF04607; hypothetical protein 5915339 4536345 MSMEG_5849 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890075.1 5913636 D 246196 CDS YP_890076.1 118472282 4534808 complement(5915336..5916760) 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 5916760 4534808 MSMEG_5848 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_890076.1 5915336 R 246196 CDS YP_890077.1 118469622 4531594 complement(5916780..5917400) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5917400 4531594 MSMEG_5850 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890077.1 5916780 R 246196 CDS YP_890078.1 118468124 4535211 5917517..5918410 1 NC_008596.1 identified by match to protein family HMM PF00756; esterase 5918410 4535211 MSMEG_5851 Mycobacterium smegmatis str. MC2 155 esterase YP_890078.1 5917517 D 246196 CDS YP_890079.1 118473752 4537728 complement(5918416..5919597) 1 NC_008596.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 5919597 purD 4537728 purD Mycobacterium smegmatis str. MC2 155 phosphoribosylamine--glycine ligase YP_890079.1 5918416 R 246196 CDS YP_890080.1 118471024 4534480 5919783..5921018 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 5921018 4534480 MSMEG_5853 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_890080.1 5919783 D 246196 CDS YP_890081.1 118468214 4537027 5921046..5921669 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5921669 4537027 MSMEG_5854 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890081.1 5921046 D 246196 CDS YP_890082.1 118472148 4532485 complement(5921730..5922956) 1 NC_008596.1 hypothetical protein 5922956 4532485 MSMEG_5855 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890082.1 5921730 R 246196 CDS YP_890083.1 118468348 4533947 complement(5922946..5923401) 1 NC_008596.1 identified by match to protein family HMM PF02627; hypothetical protein 5923401 pcaC 4533947 pcaC Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890083.1 5922946 R 246196 CDS YP_890084.1 118474010 4530970 complement(5923404..5924258) 1 NC_008596.1 identified by match to protein family HMM PF03446; match to protein family HMM PF03721; oxidoreductase 5924258 4530970 MSMEG_5857 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_890084.1 5923404 R 246196 CDS YP_890085.1 118473314 4535186 complement(5924255..5925019) 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 5925019 4535186 MSMEG_5858 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_890085.1 5924255 R 246196 CDS YP_890086.1 118471253 4531529 complement(5925031..5926500) 1 NC_008596.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 5926500 4531529 MSMEG_5859 Mycobacterium smegmatis str. MC2 155 aldehyde dehydrogenase YP_890086.1 5925031 R 246196 CDS YP_890087.1 118470238 4536757 5926686..5927285 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 5927285 4536757 MSMEG_5860 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890087.1 5926686 D 246196 CDS YP_890088.1 118469416 4531969 5927282..5928484 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 5928484 4531969 MSMEG_5861 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_890088.1 5927282 D 246196 CDS YP_890089.1 118468425 4535583 5928485..5929312 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase 5929312 4535583 MSMEG_5862 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_890089.1 5928485 D 246196 CDS YP_890090.1 118473009 4531301 5929309..5930664 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 5930664 4531301 MSMEG_5863 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_890090.1 5929309 D 246196 CDS YP_890091.1 118470271 4537163 5930669..5930872 1 NC_008596.1 cytochrome P450 5930872 4537163 MSMEG_5864 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_890091.1 5930669 D 246196 CDS YP_890092.1 118470264 4537156 5930884..5931423 1 NC_008596.1 hypothetical protein 5931423 4537156 MSMEG_5865 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890092.1 5930884 D 246196 CDS YP_890093.1 118467433 4535442 5931523..5932650 1 NC_008596.1 identified by match to protein family HMM PF00107; alcohol dehydrogenase 5932650 4535442 MSMEG_5866 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_890093.1 5931523 D 246196 CDS YP_890094.1 118469042 4536856 5932661..5933098 1 NC_008596.1 identified by match to protein family HMM PF02136; steroid delta-isomerase 5933098 4536856 MSMEG_5867 Mycobacterium smegmatis str. MC2 155 steroid delta-isomerase YP_890094.1 5932661 D 246196 CDS YP_890095.1 118468480 4537669 5933124..5933951 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 5933951 4537669 MSMEG_5869 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_890095.1 5933124 D 246196 CDS YP_890096.1 118473324 4530983 complement(5933938..5934246) 1 NC_008596.1 hypothetical protein 5934246 4530983 MSMEG_5868 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890096.1 5933938 R 246196 CDS YP_890097.1 118468917 4537079 5934342..5934770 1 NC_008596.1 identified by match to protein family HMM PF01230; HIT family protein 5934770 4537079 MSMEG_5871 Mycobacterium smegmatis str. MC2 155 HIT family protein YP_890097.1 5934342 D 246196 CDS YP_890098.1 118468443 4536891 complement(5934730..5936157) 1 NC_008596.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase PhoR 5936157 4536891 MSMEG_5870 Mycobacterium smegmatis str. MC2 155 sensor histidine kinase PhoR YP_890098.1 5934730 R 246196 CDS YP_890099.1 118471457 4534376 complement(5936199..5936918) 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator PhoP 5936918 phoP 4534376 phoP Mycobacterium smegmatis str. MC2 155 DNA-binding response regulator PhoP YP_890099.1 5936199 R 246196 CDS YP_890100.1 118472775 4531866 5937058..5937876 1 NC_008596.1 hypothetical protein 5937876 4531866 MSMEG_5873 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890100.1 5937058 D 246196 CDS YP_890101.1 118471812 4536305 5938086..5938424 1 NC_008596.1 H-N-H endonuclease F-TflIV 5938424 4536305 MSMEG_5876 Mycobacterium smegmatis str. MC2 155 H-N-H endonuclease F-TflIV YP_890101.1 5938086 D 246196 CDS YP_890102.1 118472507 4533737 complement(5938421..5938591) 1 NC_008596.1 hypothetical protein 5938591 4533737 MSMEG_5875 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890102.1 5938421 R 246196 CDS YP_890103.1 118468877 4533762 complement(5938617..5939687) 1 NC_008596.1 hypothetical protein 5939687 4533762 MSMEG_5877 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890103.1 5938617 R 246196 CDS YP_890104.1 118471497 4536836 complement(5939853..5940551) 1 NC_008596.1 identified by match to protein family HMM PF01083; serine esterase, cutinase 5940551 4536836 MSMEG_5878 Mycobacterium smegmatis str. MC2 155 serine esterase, cutinase YP_890104.1 5939853 R 246196 CDS YP_890105.1 118471763 4536372 complement(5940642..5941298) 1 NC_008596.1 identified by match to protein family HMM PF01427; D-alanyl-D-alanine dipeptidase 5941298 4536372 MSMEG_5879 Mycobacterium smegmatis str. MC2 155 D-alanyl-D-alanine dipeptidase YP_890105.1 5940642 R 246196 CDS YP_890106.1 118471038 4536740 5941399..5943753 1 NC_008596.1 identified by match to protein family HMM PF01315; match to protein family HMM PF02738; nicotine dehydrogenase 5943753 4536740 MSMEG_5880 Mycobacterium smegmatis str. MC2 155 nicotine dehydrogenase YP_890106.1 5941399 D 246196 CDS YP_890107.1 118473133 4531194 5943756..5944466 1 NC_008596.1 identified by match to protein family HMM PF06240; carbon monoxide dehydrogenase subunit G 5944466 4531194 MSMEG_5881 Mycobacterium smegmatis str. MC2 155 carbon monoxide dehydrogenase subunit G YP_890107.1 5943756 D 246196 CDS YP_890108.1 118469482 4534456 5944463..5945350 1 NC_008596.1 identified by match to protein family HMM PF00941; match to protein family HMM PF03450; carbon monoxide dehydrogenase 5945350 4534456 MSMEG_5882 Mycobacterium smegmatis str. MC2 155 carbon monoxide dehydrogenase YP_890108.1 5944463 D 246196 CDS YP_890109.1 118471693 4536455 5945343..5945855 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF01799; 2Fe-2S-binding domain-containing protein 5945855 4536455 MSMEG_5883 Mycobacterium smegmatis str. MC2 155 2Fe-2S-binding domain-containing protein YP_890109.1 5945343 D 246196 CDS YP_890110.1 118470519 4536111 5945888..5946787 1 NC_008596.1 identified by match to protein family HMM PF03446; match to protein family HMM PF03807; 3-hydroxyisobutyrate dehydrogenase 5946787 4536111 MSMEG_5884 Mycobacterium smegmatis str. MC2 155 3-hydroxyisobutyrate dehydrogenase YP_890110.1 5945888 D 246196 CDS YP_890111.1 118471973 4536159 complement(5946791..5947627) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase 5947627 4536159 MSMEG_5885 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_890111.1 5946791 R 246196 CDS YP_890112.1 118473082 4533157 complement(5947663..5948610) 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 5948610 4533157 MSMEG_5886 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_890112.1 5947663 R 246196 CDS YP_890113.1 118471399 4534874 5948845..5949216 1 NC_008596.1 intersectin-EH binding protein Ibp1 5949216 4534874 MSMEG_5887 Mycobacterium smegmatis str. MC2 155 intersectin-EH binding protein Ibp1 YP_890113.1 5948845 D 246196 CDS YP_890114.1 118472824 4537048 5949354..5949644 1 NC_008596.1 hypothetical protein 5949644 4537048 MSMEG_5888 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890114.1 5949354 D 246196 CDS YP_890115.1 118472711 4531679 5949761..5950150 1 NC_008596.1 hypothetical protein 5950150 4531679 MSMEG_5889 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890115.1 5949761 D 246196 CDS YP_890116.1 118470410 4534183 5950199..5950363 1 NC_008596.1 hypothetical protein 5950363 4534183 MSMEG_5890 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890116.1 5950199 D 246196 CDS YP_890117.1 118469301 4532640 5950364..5951875 1 NC_008596.1 identified by match to protein family HMM PF00982; alpha,alpha-trehalose-phosphate synthase 5951875 4532640 MSMEG_5892 Mycobacterium smegmatis str. MC2 155 alpha,alpha-trehalose-phosphate synthase YP_890117.1 5950364 D 246196 CDS YP_890118.1 118468395 4534784 complement(5951872..5952933) 1 NC_008596.1 identified by similarity to GB:CAD18826.1; ISMsm5, transposase 5952933 4534784 MSMEG_5891 Mycobacterium smegmatis str. MC2 155 ISMsm5, transposase YP_890118.1 5951872 R 246196 CDS YP_890119.1 118470497 4537181 complement(5952977..5953462) 1 NC_008596.1 hypothetical protein 5953462 4537181 MSMEG_5893 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890119.1 5952977 R 246196 CDS YP_890120.1 118469329 4535919 complement(5953462..5954094) 1 NC_008596.1 hypothetical protein 5954094 4535919 MSMEG_5894 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890120.1 5953462 R 246196 CDS YP_890121.1 118467558 4535512 complement(5954163..5955857) 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor mce family protein 5955857 4535512 MSMEG_5895 Mycobacterium smegmatis str. MC2 155 virulence factor mce family protein YP_890121.1 5954163 R 246196 CDS YP_890122.1 118470887 4537192 complement(5955858..5957006) 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 5957006 4537192 MSMEG_5896 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_890122.1 5955858 R 246196 CDS YP_890123.1 118470654 4534662 complement(5957066..5958430) 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor mce family protein 5958430 4534662 MSMEG_5897 Mycobacterium smegmatis str. MC2 155 virulence factor mce family protein YP_890123.1 5957066 R 246196 CDS YP_890124.1 118471840 4536294 complement(5958427..5959485) 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 5959485 4536294 MSMEG_5898 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_890124.1 5958427 R 246196 CDS YP_890125.1 118473663 4531234 complement(5959478..5960512) 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 5960512 4531234 MSMEG_5899 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_890125.1 5959478 R 246196 CDS YP_890126.1 118470324 4535202 complement(5960513..5961715) 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 5961715 4535202 MSMEG_5900 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_890126.1 5960513 R 246196 CDS YP_890127.1 118470997 4533490 complement(5961722..5962585) 1 NC_008596.1 identified by match to protein family HMM PF02405; TrnB2 protein 5962585 4533490 MSMEG_5901 Mycobacterium smegmatis str. MC2 155 TrnB2 protein YP_890127.1 5961722 R 246196 CDS YP_890128.1 118470037 4531652 complement(5962620..5963384) 1 NC_008596.1 identified by match to protein family HMM PF02405; hypothetical protein 5963384 4531652 MSMEG_5902 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890128.1 5962620 R 246196 CDS YP_890129.1 118467997 4531317 complement(5963654..5964604) 1 NC_008596.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 5964604 fabG 4531317 fabG Mycobacterium smegmatis str. MC2 155 3-ketoacyl-ACP reductase YP_890129.1 5963654 R 246196 CDS YP_890130.1 118470081 4532956 complement(5964647..5964838) 1 NC_008596.1 hypothetical protein 5964838 4532956 MSMEG_5904 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890130.1 5964647 R 246196 CDS YP_890131.1 118467643 4534991 complement(5964972..5965067) 1 NC_008596.1 hypothetical protein 5965067 4534991 MSMEG_5905 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890131.1 5964972 R 246196 CDS YP_890132.1 118469439 4534815 5965003..5966181 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; acyl-CoA dehydrogenase 5966181 4534815 MSMEG_5906 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_890132.1 5965003 D 246196 CDS YP_890133.1 118468383 4532932 5966201..5967298 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase 5967298 4532932 MSMEG_5907 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_890133.1 5966201 D 246196 CDS YP_890134.1 118469213 4533267 5967301..5968845 1 NC_008596.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 5968845 4533267 MSMEG_5908 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_890134.1 5967301 D 246196 CDS YP_890135.1 118471455 4534374 5968842..5969831 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF05368; match to protein family HMM PF07993; oxidoreductase 5969831 4534374 MSMEG_5909 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_890135.1 5968842 D 246196 CDS YP_890136.1 118471538 4537619 5969786..5970586 1 NC_008596.1 AraC family transcriptional regulator 5970586 4537619 MSMEG_5911 Mycobacterium smegmatis str. MC2 155 AraC family transcriptional regulator YP_890136.1 5969786 D 246196 CDS YP_890137.1 118473761 4537737 complement(5970523..5970918) 1 NC_008596.1 identified by match to protein family HMM PF00903; quinone binding protein 5970918 4537737 MSMEG_5910 Mycobacterium smegmatis str. MC2 155 quinone binding protein YP_890137.1 5970523 R 246196 CDS YP_890138.1 118467642 4534217 5971046..5972599 1 NC_008596.1 NADP-dependent semialdehyde dehydrogenase; part of alternative pathway from alpha-ketoglutarate to succinate; succinate-semialdehyde dehydrogenase 5972599 gabD2 4534217 gabD2 Mycobacterium smegmatis str. MC2 155 succinate-semialdehyde dehydrogenase YP_890138.1 5971046 D 246196 CDS YP_890139.1 118470318 4535196 complement(5972603..5973724) 1 NC_008596.1 identified by match to protein family HMM PF03060; dioxygenase 5973724 4535196 MSMEG_5913 Mycobacterium smegmatis str. MC2 155 dioxygenase YP_890139.1 5972603 R 246196 CDS YP_890140.1 118472219 4531469 complement(5973735..5975390) 1 NC_008596.1 activates fatty acids by binding to coenzyme A; in Mycobacterium may be involved in virulence; acyl-CoA synthetase 5975390 4531469 MSMEG_5914 Mycobacterium smegmatis str. MC2 155 acyl-CoA synthetase YP_890140.1 5973735 R 246196 CDS YP_890141.1 118468723 4532793 5975459..5976259 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 5976259 4532793 MSMEG_5915 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_890141.1 5975459 D 246196 CDS YP_890142.1 118469706 4537211 complement(5976314..5976595) 1 NC_008596.1 hypothetical protein 5976595 4537211 MSMEG_5916 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890142.1 5976314 R 246196 CDS YP_890143.1 118470374 4532321 5976871..5977719 1 NC_008596.1 hypothetical protein 5977719 4532321 MSMEG_5917 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890143.1 5976871 D 246196 CDS YP_890144.1 118472792 4533135 complement(5977791..5978996) 1 NC_008596.1 identified by match to protein family HMM PF00067; P450 heme-thiolate protein 5978996 4533135 MSMEG_5918 Mycobacterium smegmatis str. MC2 155 P450 heme-thiolate protein YP_890144.1 5977791 R 246196 CDS YP_890145.1 118470481 4537165 complement(5978993..5979709) 1 NC_008596.1 hypothetical protein 5979709 4537165 MSMEG_5919 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890145.1 5978993 R 246196 CDS YP_890146.1 118470334 4534917 complement(5979753..5980784) 1 NC_008596.1 identified by match to protein family HMM PF00296; FMN-dependent monooxygenase 5980784 4534917 MSMEG_5920 Mycobacterium smegmatis str. MC2 155 FMN-dependent monooxygenase YP_890146.1 5979753 R 246196 CDS YP_890147.1 118470277 4537538 5980944..5981846 1 NC_008596.1 identified by match to protein family HMM PF01796; hypothetical protein 5981846 4537538 MSMEG_5921 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890147.1 5980944 D 246196 CDS YP_890148.1 118467607 4533069 5981886..5982929 1 NC_008596.1 lipid-transfer protein 5982929 4533069 MSMEG_5922 Mycobacterium smegmatis str. MC2 155 lipid-transfer protein YP_890148.1 5981886 D 246196 CDS YP_890149.1 118473286 4535548 5982929..5984107 1 NC_008596.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 5984107 4535548 MSMEG_5923 Mycobacterium smegmatis str. MC2 155 acetyl-CoA acetyltransferase YP_890149.1 5982929 D 246196 CDS YP_890150.1 118472215 4531465 5984266..5984898 1 NC_008596.1 hypothetical protein 5984898 4531465 MSMEG_5924 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890150.1 5984266 D 246196 CDS YP_890151.1 118467782 4535703 5985003..5986154 1 NC_008596.1 identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain-containing protein 5986154 4535703 MSMEG_5925 Mycobacterium smegmatis str. MC2 155 Rieske (2Fe-2S) domain-containing protein YP_890151.1 5985003 D 246196 CDS YP_890152.1 118473815 4531625 5986154..5986630 1 NC_008596.1 hypothetical protein 5986630 4531625 MSMEG_5927 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890152.1 5986154 D 246196 CDS YP_890153.1 118469391 4532285 complement(5986627..5988120) 1 NC_008596.1 hypothetical protein 5988120 4532285 MSMEG_5926 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890153.1 5986627 R 246196 CDS YP_890154.1 118470154 4531713 complement(5988156..5988833) 1 NC_008596.1 hypothetical protein 5988833 4531713 MSMEG_5928 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890154.1 5988156 R 246196 CDS YP_890155.1 118468894 4536687 complement(5988883..5989782) 1 NC_008596.1 hypothetical protein 5989782 4536687 MSMEG_5929 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890155.1 5988883 R 246196 CDS YP_890156.1 118467577 4532867 complement(5989939..5991066) 1 NC_008596.1 hypothetical protein 5991066 4532867 MSMEG_5930 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890156.1 5989939 R 246196 CDS YP_890157.1 118470946 4533682 complement(5991078..5991860) 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 5991860 4533682 MSMEG_5931 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_890157.1 5991078 R 246196 CDS YP_890158.1 118472718 4531687 complement(5991863..5992990) 1 NC_008596.1 hypothetical protein 5992990 4531687 MSMEG_5932 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890158.1 5991863 R 246196 CDS YP_890159.1 118468392 4534781 5993104..5994012 1 NC_008596.1 hypothetical protein 5994012 4534781 MSMEG_5933 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890159.1 5993104 D 246196 CDS YP_890160.1 118467840 4535467 complement(5994025..5994357) 1 NC_008596.1 hypothetical protein 5994357 4535467 MSMEG_5934 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890160.1 5994025 R 246196 CDS YP_890161.1 118471724 4536410 complement(5994502..5996577) 1 NC_008596.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR00614; ATP-dependent DNA helicase 5996577 4536410 MSMEG_5935 Mycobacterium smegmatis str. MC2 155 ATP-dependent DNA helicase YP_890161.1 5994502 R 246196 CDS YP_890162.1 118472631 4537650 5996576..5997187 1 NC_008596.1 hypothetical protein 5997187 4537650 MSMEG_5938 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890162.1 5996576 D 246196 CDS YP_890163.1 118469251 4531543 complement(5996684..5997067) 1 NC_008596.1 hypothetical protein 5997067 4531543 MSMEG_5936 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890163.1 5996684 R 246196 CDS YP_890164.1 118469867 4530906 complement(5997153..5998202) 1 NC_008596.1 catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase 5998202 4530906 MSMEG_5937 Mycobacterium smegmatis str. MC2 155 4-hydroxy-2-ketovalerate aldolase YP_890164.1 5997153 R 246196 CDS YP_890165.1 118471479 4531880 complement(5998199..5999164) 1 NC_008596.1 catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase 5999164 4531880 MSMEG_5939 Mycobacterium smegmatis str. MC2 155 acetaldehyde dehydrogenase YP_890165.1 5998199 R 246196 CDS YP_890166.1 118469647 4535057 complement(5999161..5999946) 1 NC_008596.1 identified by match to protein family HMM PF01689; 2-keto-4-pentenoate hydratase 5999946 4535057 MSMEG_5940 Mycobacterium smegmatis str. MC2 155 2-keto-4-pentenoate hydratase YP_890166.1 5999161 R 246196 CDS YP_890167.2 161598319 4536963 6000020..6001720 1 NC_008596.1 initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; 3-ketosteroid-delta-1-dehydrogenase 6001720 4536963 MSMEG_5941 Mycobacterium smegmatis str. MC2 155 3-ketosteroid-delta-1-dehydrogenase YP_890167.2 6000020 D 246196 CDS YP_890168.1 118473413 4537400 6001722..6002582 1 NC_008596.1 identified by match to protein family HMM PF01575; peroxisomal multifunctional enzyme type 2 6002582 4537400 MSMEG_5943 Mycobacterium smegmatis str. MC2 155 peroxisomal multifunctional enzyme type 2 YP_890168.1 6001722 D 246196 CDS YP_890169.1 118472484 4532435 complement(6002532..6005153) 1 NC_008596.1 identified by match to protein family HMM PF00501; AMP-dependent synthetase/ligase 6005153 4532435 MSMEG_5942 Mycobacterium smegmatis str. MC2 155 AMP-dependent synthetase/ligase YP_890169.1 6002532 R 246196 CDS YP_890170.1 118473388 4536633 6005369..6006970 1 NC_008596.1 identified by match to protein family HMM PF00732; match to protein family HMM PF01266; glucose-methanol-choline oxidoreductase 6006970 4536633 MSMEG_5944 Mycobacterium smegmatis str. MC2 155 glucose-methanol-choline oxidoreductase YP_890170.1 6005369 D 246196 CDS YP_890171.1 118469130 4535343 6007005..6007583 1 NC_008596.1 identified by match to protein family HMM PF02698; hypothetical protein 6007583 4535343 MSMEG_5945 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890171.1 6007005 D 246196 CDS YP_890172.1 118470087 4532962 6007711..6008229 1 NC_008596.1 serine O-acetyltransferase 6008229 cysE 4532962 cysE Mycobacterium smegmatis str. MC2 155 serine O-acetyltransferase YP_890172.1 6007711 D 246196 CDS YP_890173.1 118471310 4534650 complement(6008195..6009514) 1 NC_008596.1 hypothetical protein 6009514 4534650 MSMEG_5946 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890173.1 6008195 R 246196 CDS YP_890174.1 118472025 4534105 complement(6009511..6010416) 1 NC_008596.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 6010416 4534105 MSMEG_5948 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_890174.1 6009511 R 246196 CDS YP_890175.1 118473217 4531067 complement(6010413..6011549) 1 NC_008596.1 hypothetical protein 6011549 4531067 MSMEG_5949 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890175.1 6010413 R 246196 CDS YP_890176.1 118469734 4537609 6011799..6012347 1 NC_008596.1 colanic acid biosynthesis acetyltransferase WcaF 6012347 4537609 MSMEG_5950 Mycobacterium smegmatis str. MC2 155 colanic acid biosynthesis acetyltransferase WcaF YP_890176.1 6011799 D 246196 CDS YP_890177.1 118470651 4532410 6012352..6013476 1 NC_008596.1 identified by match to protein family HMM PF00534; group 1 glycosyl transferase 6013476 4532410 MSMEG_5951 Mycobacterium smegmatis str. MC2 155 group 1 glycosyl transferase YP_890177.1 6012352 D 246196 CDS YP_890178.1 118471702 4536425 6013473..6014132 1 NC_008596.1 identified by match to protein family HMM PF00657; hypothetical protein 6014132 4536425 MSMEG_5952 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890178.1 6013473 D 246196 CDS YP_890179.1 118472655 4535075 6014129..6014881 1 NC_008596.1 hypothetical protein 6014881 4535075 MSMEG_5953 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890179.1 6014129 D 246196 CDS YP_890180.1 118473618 4531014 6014893..6015528 1 NC_008596.1 identified by match to protein family HMM PF02706; cell surface polysaccharide biosynthesis 6015528 4531014 MSMEG_5954 Mycobacterium smegmatis str. MC2 155 cell surface polysaccharide biosynthesis YP_890180.1 6014893 D 246196 CDS YP_890181.1 118472183 4533721 6015525..6016190 1 NC_008596.1 identified by match to protein family HMM PF02706; protein-tyrosine kinase 6016190 4533721 MSMEG_5955 Mycobacterium smegmatis str. MC2 155 protein-tyrosine kinase YP_890181.1 6015525 D 246196 CDS YP_890182.1 118469570 4531444 complement(6016202..6017173) 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD dependent epimerase/dehydratase 6017173 4531444 MSMEG_5956 Mycobacterium smegmatis str. MC2 155 NAD dependent epimerase/dehydratase YP_890182.1 6016202 R 246196 CDS YP_890183.1 118468121 4535208 complement(6017397..6018887) 1 NC_008596.1 identified by similarity to SP:O07299; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; GDP-mannose 6-dehydrogenase AlgD 6018887 algD 4535208 algD Mycobacterium smegmatis str. MC2 155 GDP-mannose 6-dehydrogenase AlgD YP_890183.1 6017397 R 246196 CDS YP_890184.1 118467806 4535983 6019278..6020018 1 NC_008596.1 hypothetical protein 6020018 4535983 MSMEG_5958 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890184.1 6019278 D 246196 CDS YP_890185.1 118468794 4535312 6020161..6021429 1 NC_008596.1 identified by match to protein family HMM PF04932; O-antigen polymerase 6021429 4535312 MSMEG_5960 Mycobacterium smegmatis str. MC2 155 O-antigen polymerase YP_890185.1 6020161 D 246196 CDS YP_890186.1 118473335 4532000 complement(6021392..6022453) 1 NC_008596.1 hypothetical protein 6022453 4532000 MSMEG_5959 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890186.1 6021392 R 246196 CDS YP_890187.1 118470913 4537587 complement(6022498..6023439) 1 NC_008596.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 6023439 4537587 MSMEG_5961 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_890187.1 6022498 R 246196 CDS YP_890188.1 118470611 4532114 complement(6023439..6024206) 1 NC_008596.1 identified by match to protein family HMM PF01522; glycosyl transferase family protein 6024206 4532114 MSMEG_5962 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_890188.1 6023439 R 246196 CDS YP_890189.1 118470059 4535952 complement(6024203..6026290) 1 NC_008596.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 6026290 4535952 MSMEG_5963 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_890189.1 6024203 R 246196 CDS YP_890190.1 118469261 4531554 complement(6026548..6027831) 1 NC_008596.1 identified by match to protein family HMM PF00534; group 1 glycosyl transferase 6027831 4531554 MSMEG_5964 Mycobacterium smegmatis str. MC2 155 group 1 glycosyl transferase YP_890190.1 6026548 R 246196 CDS YP_890191.1 118467739 4535638 6028304..6029836 1 NC_008596.1 hypothetical protein 6029836 4535638 MSMEG_5965 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890191.1 6028304 D 246196 CDS YP_890192.1 118473115 4531841 complement(6029863..6030627) 1 NC_008596.1 identified by match to protein family HMM PF00106; oxidoreductase, short chain dehydrogenase/reductase 6030627 4531841 MSMEG_5966 Mycobacterium smegmatis str. MC2 155 oxidoreductase, short chain dehydrogenase/reductase YP_890192.1 6029863 R 246196 CDS YP_890193.1 118472302 4532774 complement(6030680..6032335) 1 NC_008596.1 identified by match to protein family HMM PF00732; match to protein family HMM PF01266; match to protein family HMM PF05199; glucose-methanol-choline oxidoreductase 6032335 4532774 MSMEG_5967 Mycobacterium smegmatis str. MC2 155 glucose-methanol-choline oxidoreductase YP_890193.1 6030680 R 246196 CDS YP_890194.1 118469862 4530900 complement(6032735..6034267) 1 NC_008596.1 identified by match to protein family HMM PF01943; polysaccharide biosynthesis protein 6034267 4530900 MSMEG_5968 Mycobacterium smegmatis str. MC2 155 polysaccharide biosynthesis protein YP_890194.1 6032735 R 246196 CDS YP_890195.1 118469299 4532638 complement(6034371..6035585) 1 NC_008596.1 hypothetical protein 6035585 4532638 MSMEG_5969 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890195.1 6034371 R 246196 CDS YP_890196.1 118468436 4535594 6035857..6037233 1 NC_008596.1 catalyzes the formation of 5-aminovulinate from (S)-4-amino-5-oxopentanoate; glutamate-1-semialdehyde 2,1-aminomutase 6037233 4535594 MSMEG_5970 Mycobacterium smegmatis str. MC2 155 glutamate-1-semialdehyde 2,1-aminomutase YP_890196.1 6035857 D 246196 CDS YP_890197.1 118470738 4533289 6037508..6037984 1 NC_008596.1 hypothetical protein 6037984 4533289 MSMEG_5971 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890197.1 6037508 D 246196 CDS YP_890198.1 118469395 4532289 complement(6038034..6038726) 1 NC_008596.1 hypothetical protein 6038726 4532289 MSMEG_5972 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890198.1 6038034 R 246196 CDS YP_890199.1 118470837 4532523 6038769..6038999 1 NC_008596.1 hypothetical protein 6038999 4532523 MSMEG_5973 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890199.1 6038769 D 246196 CDS YP_890200.1 118473356 4530832 6039284..6039442 1 NC_008596.1 hypothetical protein 6039442 4530832 MSMEG_5974 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890200.1 6039284 D 246196 CDS YP_890201.1 118472001 4533602 complement(6039559..6040632) 1 NC_008596.1 methyltransferase type 12 6040632 4533602 MSMEG_5975 Mycobacterium smegmatis str. MC2 155 methyltransferase type 12 YP_890201.1 6039559 R 246196 CDS YP_890202.1 118469656 4535066 6040647..6041201 1 NC_008596.1 identified by match to protein family HMM PF00908; match to protein family HMM TIGR01221; dTDP-4-dehydrorhamnose 3,5-epimerase 6041201 rfbC 4535066 rfbC Mycobacterium smegmatis str. MC2 155 dTDP-4-dehydrorhamnose 3,5-epimerase YP_890202.1 6040647 D 246196 CDS YP_890203.1 118468084 4536012 complement(6041185..6042213) 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; epimerase/dehydratase 6042213 4536012 MSMEG_5976 Mycobacterium smegmatis str. MC2 155 epimerase/dehydratase YP_890203.1 6041185 R 246196 CDS YP_890204.1 118473056 4534608 complement(6042243..6042911) 1 NC_008596.1 identified by match to protein family HMM PF02585; GlcNAc-PI de-N-acetylase 6042911 4534608 MSMEG_5978 Mycobacterium smegmatis str. MC2 155 GlcNAc-PI de-N-acetylase YP_890204.1 6042243 R 246196 CDS YP_890205.1 118471496 4536835 complement(6042908..6043708) 1 NC_008596.1 transferase 6043708 4536835 MSMEG_5979 Mycobacterium smegmatis str. MC2 155 transferase YP_890205.1 6042908 R 246196 CDS YP_890206.1 118472221 4531471 complement(6043705..6044961) 1 NC_008596.1 methyltransferase 6044961 4531471 MSMEG_5980 Mycobacterium smegmatis str. MC2 155 methyltransferase YP_890206.1 6043705 R 246196 CDS YP_890207.1 118469953 4530916 complement(6044958..6045992) 1 NC_008596.1 identified by match to protein family HMM PF04101; glycosyl transferase family protein 6045992 4530916 MSMEG_5981 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_890207.1 6044958 R 246196 CDS YP_890208.1 118469366 4535880 complement(6046007..6047368) 1 NC_008596.1 identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; UDP-glucose 6-dehydrogenase 6047368 4535880 MSMEG_5982 Mycobacterium smegmatis str. MC2 155 UDP-glucose 6-dehydrogenase YP_890208.1 6046007 R 246196 CDS YP_890209.1 118470053 4534598 complement(6047365..6048243) 1 NC_008596.1 identified by match to protein family HMM PF00483; match to protein family HMM TIGR01207; glucose-1-phosphate thymidylyltransferase 6048243 rfbA 4534598 rfbA Mycobacterium smegmatis str. MC2 155 glucose-1-phosphate thymidylyltransferase YP_890209.1 6047365 R 246196 CDS YP_890210.1 118472257 4531566 complement(6048253..6049809) 1 NC_008596.1 identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025; UDP-phosphate galactosephosphotransferase 6049809 4531566 MSMEG_5984 Mycobacterium smegmatis str. MC2 155 UDP-phosphate galactosephosphotransferase YP_890210.1 6048253 R 246196 CDS YP_890211.1 118473865 4531113 complement(6049806..6050765) 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD dependent epimerase/dehydratase 6050765 4531113 MSMEG_5985 Mycobacterium smegmatis str. MC2 155 NAD dependent epimerase/dehydratase YP_890211.1 6049806 R 246196 CDS YP_890212.1 118471174 4534960 complement(6050802..6052589) 1 NC_008596.1 identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135; glucosamine--fructose-6-phosphate aminotransferase 6052589 glmS 4534960 glmS Mycobacterium smegmatis str. MC2 155 glucosamine--fructose-6-phosphate aminotransferase YP_890212.1 6050802 R 246196 CDS YP_890213.1 118472043 4535389 complement(6052909..6053826) 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; two-component regulator 6053826 4535389 MSMEG_5987 Mycobacterium smegmatis str. MC2 155 two-component regulator YP_890213.1 6052909 R 246196 CDS YP_890214.1 118473819 4531629 complement(6054384..6055199) 1 NC_008596.1 hypothetical protein 6055199 4531629 MSMEG_5988 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890214.1 6054384 R 246196 CDS YP_890215.1 118472827 4537051 complement(6055221..6056327) 1 NC_008596.1 hypothetical protein 6056327 4537051 MSMEG_5989 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890215.1 6055221 R 246196 CDS YP_890216.1 118472531 4534730 complement(6056400..6057563) 1 NC_008596.1 lipid-transfer protein 6057563 4534730 MSMEG_5990 Mycobacterium smegmatis str. MC2 155 lipid-transfer protein YP_890216.1 6056400 R 246196 CDS YP_890217.1 118471314 4534654 complement(6057560..6057973) 1 NC_008596.1 identified by match to protein family HMM PF01575; MaoC like domain-containing protein 6057973 4534654 MSMEG_5991 Mycobacterium smegmatis str. MC2 155 MaoC like domain-containing protein YP_890217.1 6057560 R 246196 CDS YP_890218.1 118468265 4533998 complement(6057955..6058920) 1 NC_008596.1 identified by match to protein family HMM PF01796; hypothetical protein 6058920 4533998 MSMEG_5992 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890218.1 6057955 R 246196 CDS YP_890219.1 118471380 4534974 complement(6058917..6060080) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; acyl-CoA dehydrogenase 6060080 4534974 MSMEG_5993 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_890219.1 6058917 R 246196 CDS YP_890220.1 118472010 4533611 complement(6060080..6061084) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase 6061084 4533611 MSMEG_5994 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_890220.1 6060080 R 246196 CDS YP_890221.1 118472698 4531666 complement(6061103..6062386) 1 NC_008596.1 identified by match to protein family HMM PF00067; P450 heme-thiolate protein 6062386 4531666 MSMEG_5995 Mycobacterium smegmatis str. MC2 155 P450 heme-thiolate protein YP_890221.1 6061103 R 246196 CDS YP_890222.1 118473397 4537015 6062510..6063673 1 NC_008596.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 6063673 4537015 MSMEG_5996 Mycobacterium smegmatis str. MC2 155 acetyl-CoA acetyltransferase YP_890222.1 6062510 D 246196 CDS YP_890223.1 118467414 4536030 6063676..6064056 1 NC_008596.1 hypothetical protein 6064056 4536030 MSMEG_5997 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890223.1 6063676 D 246196 CDS YP_890224.1 118469733 4537608 6064064..6064543 1 NC_008596.1 identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 6064543 4537608 MSMEG_5998 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890224.1 6064064 D 246196 CDS YP_890225.1 118470202 4532496 complement(6064621..6065526) 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 6065526 4532496 MSMEG_5999 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_890225.1 6064621 R 246196 CDS YP_890226.1 118468241 4537426 complement(6065542..6066324) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase 6066324 4537426 MSMEG_6000 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_890226.1 6065542 R 246196 CDS YP_890227.1 118472786 4533129 6066386..6067141 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 6067141 4533129 MSMEG_6001 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_890227.1 6066386 D 246196 CDS YP_890228.1 118470839 4532526 6067138..6068025 1 NC_008596.1 identified by match to protein family HMM PF01144; coenzyme A transferase subunit A 6068025 4532526 MSMEG_6002 Mycobacterium smegmatis str. MC2 155 coenzyme A transferase subunit A YP_890228.1 6067138 D 246196 CDS YP_890229.1 118470970 4534542 6068022..6068771 1 NC_008596.1 coenzyme A transferase subunit B 6068771 4534542 MSMEG_6003 Mycobacterium smegmatis str. MC2 155 coenzyme A transferase subunit B YP_890229.1 6068022 D 246196 CDS YP_890230.1 118467538 4536000 6068768..6069844 1 NC_008596.1 identified by similarity to GB:AAF98273.1; match to protein family HMM PF03060; oxidoreductase, 2-nitropropane dioxygenase 6069844 4536000 MSMEG_6004 Mycobacterium smegmatis str. MC2 155 oxidoreductase, 2-nitropropane dioxygenase YP_890230.1 6068768 D 246196 CDS YP_890231.1 118467756 4535656 6069888..6070526 1 NC_008596.1 hypothetical protein 6070526 4535656 MSMEG_6005 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890231.1 6069888 D 246196 CDS YP_890232.1 118470317 4535195 6070523..6071269 1 NC_008596.1 hypothetical protein 6071269 4535195 MSMEG_6006 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890232.1 6070523 D 246196 CDS YP_890233.1 118470233 4533924 complement(6072343..6073491) 1 NC_008596.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 6073491 4533924 MSMEG_6008 Mycobacterium smegmatis str. MC2 155 acetyl-CoA acetyltransferase YP_890233.1 6072343 R 246196 CDS YP_890234.1 118473595 4534868 complement(6073484..6074101) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 6074101 4534868 MSMEG_6009 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890234.1 6073484 R 246196 CDS YP_890235.1 118467395 4535816 6074416..6074934 1 NC_008596.1 hypothetical protein 6074934 4535816 MSMEG_6010 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890235.1 6074416 D 246196 CDS YP_890236.1 118473169 4532571 complement(6075060..6075848) 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 6075848 4532571 MSMEG_6011 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_890236.1 6075060 R 246196 CDS YP_890237.1 118469811 4532837 complement(6075845..6077023) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 6077023 4532837 MSMEG_6012 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_890237.1 6075845 R 246196 CDS YP_890238.1 118470354 4534629 6078624..6079766 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; acyl-CoA dehydrogenase 6079766 4534629 MSMEG_6014 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_890238.1 6078624 D 246196 CDS YP_890239.1 118468829 4535406 6079763..6080719 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase 6080719 4535406 MSMEG_6015 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_890239.1 6079763 D 246196 CDS YP_890240.1 118468142 4532685 6080716..6081651 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF08028; acyl-CoA dehydrogenase 6081651 4532685 MSMEG_6016 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_890240.1 6080716 D 246196 CDS YP_890241.1 118471697 4536459 6081669..6082838 1 NC_008596.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 6082838 4536459 MSMEG_6017 Mycobacterium smegmatis str. MC2 155 aspartate aminotransferase YP_890241.1 6081669 D 246196 CDS YP_890242.1 118470376 4532323 complement(6082847..6084166) 1 NC_008596.1 identified by match to protein family HMM PF02653; xylose transporter permease XylH 6084166 4532323 MSMEG_6018 Mycobacterium smegmatis str. MC2 155 xylose transporter permease XylH YP_890242.1 6082847 R 246196 CDS YP_890243.1 118468742 4534270 complement(6084175..6084954) 1 NC_008596.1 identified by match to protein family HMM PF00005; sugar ABC transporter ATPase 6084954 4534270 MSMEG_6019 Mycobacterium smegmatis str. MC2 155 sugar ABC transporter ATPase YP_890243.1 6084175 R 246196 CDS YP_890244.1 118470148 4531707 complement(6084958..6086037) 1 NC_008596.1 sugar ABC transporter periplasmic protein 6086037 4531707 MSMEG_6020 Mycobacterium smegmatis str. MC2 155 sugar ABC transporter periplasmic protein YP_890244.1 6084958 R 246196 CDS YP_890245.1 118469437 4534333 complement(6086090..6087313) 1 NC_008596.1 catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 6087313 xylA 4534333 xylA Mycobacterium smegmatis str. MC2 155 xylose isomerase YP_890245.1 6086090 R 246196 CDS YP_890246.1 118473203 4531053 6087420..6088601 1 NC_008596.1 identified by match to protein family HMM PF00480; xylose repressor, ROK-family protein transcriptional regulator 6088601 4531053 MSMEG_6022 Mycobacterium smegmatis str. MC2 155 xylose repressor, ROK-family protein transcriptional regulator YP_890246.1 6087420 D 246196 CDS YP_890247.1 118467961 4532072 complement(6088633..6089832) 1 NC_008596.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; transposase 6089832 4532072 MSMEG_6023 Mycobacterium smegmatis str. MC2 155 transposase YP_890247.1 6088633 R 246196 CDS YP_890248.1 118469447 4534823 6090096..6091412 1 NC_008596.1 hypothetical protein 6091412 4534823 MSMEG_6025 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890248.1 6090096 D 246196 CDS YP_890249.1 118472132 4532175 complement(6091393..6093327) 1 NC_008596.1 AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase; acetoacetyl-CoA synthetase 6093327 4532175 MSMEG_6024 Mycobacterium smegmatis str. MC2 155 acetoacetyl-CoA synthetase YP_890249.1 6091393 R 246196 CDS YP_890250.1 118469625 4534083 complement(6093324..6094070) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM TIGR01963; 3-hydroxybutyrate dehydrogenase 6094070 4534083 MSMEG_6026 Mycobacterium smegmatis str. MC2 155 3-hydroxybutyrate dehydrogenase YP_890250.1 6093324 R 246196 CDS YP_890251.1 118468696 4534686 complement(6094067..6095395) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily protein 6095395 4534686 MSMEG_6027 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_890251.1 6094067 R 246196 CDS YP_890252.1 118472715 4531683 6095547..6096458 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 6096458 4531683 MSMEG_6028 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_890252.1 6095547 D 246196 CDS YP_890253.1 118470682 4531745 6096471..6097322 1 NC_008596.1 hypothetical protein 6097322 4531745 MSMEG_6029 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890253.1 6096471 D 246196 CDS YP_890254.1 118471413 4534889 complement(6097336..6098625) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome p450 6098625 4534889 MSMEG_6030 Mycobacterium smegmatis str. MC2 155 cytochrome p450 YP_890254.1 6097336 R 246196 CDS YP_890255.1 118468780 4535671 6098766..6099374 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 6099374 4535671 MSMEG_6032 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890255.1 6098766 D 246196 CDS YP_890256.1 118468672 4535895 complement(6099367..6100206) 1 NC_008596.1 identified by match to protein family HMM PF00106; carveol dehydrogenase 6100206 4535895 MSMEG_6031 Mycobacterium smegmatis str. MC2 155 carveol dehydrogenase YP_890256.1 6099367 R 246196 CDS YP_890257.1 118470774 4531138 complement(6100369..6101910) 1 NC_008596.1 hypothetical protein 6101910 4531138 MSMEG_6033 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890257.1 6100369 R 246196 CDS YP_890258.1 118467738 4534021 6101788..6101937 1 NC_008596.1 hypothetical protein 6101937 4534021 MSMEG_6034 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890258.1 6101788 D 246196 CDS YP_890259.1 118472647 4537666 complement(6102080..6102649) 1 NC_008596.1 identified by match to protein family HMM PF01613; nitrilotriacetate monooxygenase component B 6102649 4537666 MSMEG_6035 Mycobacterium smegmatis str. MC2 155 nitrilotriacetate monooxygenase component B YP_890259.1 6102080 R 246196 CDS YP_890260.1 118471712 4536437 complement(6102657..6103556) 1 NC_008596.1 identified by match to protein family HMM PF00903; biphenyl-2,3-diol 1,2-dioxygenase 6103556 4536437 MSMEG_6036 Mycobacterium smegmatis str. MC2 155 biphenyl-2,3-diol 1,2-dioxygenase YP_890260.1 6102657 R 246196 CDS YP_890261.1 118472122 4532164 complement(6103557..6104435) 1 NC_008596.1 identified by match to protein family HMM PF00561; 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase 6104435 4532164 MSMEG_6037 Mycobacterium smegmatis str. MC2 155 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase YP_890261.1 6103557 R 246196 CDS YP_890262.1 118469163 4534749 complement(6104435..6105625) 1 NC_008596.1 identified by match to protein family HMM PF08028; pigment production hydroxylase 6105625 4534749 MSMEG_6038 Mycobacterium smegmatis str. MC2 155 pigment production hydroxylase YP_890262.1 6104435 R 246196 CDS YP_890263.1 118469943 4535854 6105785..6106846 1 NC_008596.1 identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; oxidoreductase, electron transfer component 6106846 4535854 MSMEG_6039 Mycobacterium smegmatis str. MC2 155 oxidoreductase, electron transfer component YP_890263.1 6105785 D 246196 CDS YP_890264.1 118469878 4536570 6106889..6107464 1 NC_008596.1 hypothetical protein 6107464 4536570 MSMEG_6040 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890264.1 6106889 D 246196 CDS YP_890265.1 118473968 4533039 complement(6107545..6109689) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 6109689 4533039 MSMEG_6041 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_890265.1 6107545 R 246196 CDS YP_890266.1 118473108 4531834 6109952..6110566 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 6110566 4531834 MSMEG_6042 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890266.1 6109952 D 246196 CDS YP_890267.1 118471139 4531826 6110570..6111319 1 NC_008596.1 identified by match to protein family HMM PF02358; match to protein family HMM TIGR00685; match to protein family HMM TIGR01484; trehalose-phosphatase 6111319 otsB 4531826 otsB Mycobacterium smegmatis str. MC2 155 trehalose-phosphatase YP_890267.1 6110570 D 246196 CDS YP_890268.1 118471149 4530939 complement(6111320..6112420) 1 NC_008596.1 identified by match to protein family HMM PF00532; ligand-binding /sugar binding domain-containing protein 6112420 4530939 MSMEG_6044 Mycobacterium smegmatis str. MC2 155 ligand-binding /sugar binding domain-containing protein YP_890268.1 6111320 R 246196 CDS YP_890269.1 118469279 4532249 complement(6112469..6113341) 1 NC_008596.1 identified by match to protein family HMM PF00950; heavy metal ABC transporter inner membrane protein 6113341 4532249 MSMEG_6045 Mycobacterium smegmatis str. MC2 155 heavy metal ABC transporter inner membrane protein YP_890269.1 6112469 R 246196 CDS YP_890270.1 118468386 4534775 complement(6113341..6114120) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 6114120 4534775 MSMEG_6046 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_890270.1 6113341 R 246196 CDS YP_890271.1 118468373 4532922 complement(6114107..6115072) 1 NC_008596.1 identified by match to protein family HMM PF01297; cation ABC transporter periplasmic cation-binding protein 6115072 4532922 MSMEG_6047 Mycobacterium smegmatis str. MC2 155 cation ABC transporter periplasmic cation-binding protein YP_890271.1 6114107 R 246196 CDS YP_890272.1 118468786 4535677 6115172..6116308 1 NC_008596.1 identified by match to protein family HMM PF02492; match to protein family HMM PF07683; cobalamin synthesis protein/P47K 6116308 4535677 MSMEG_6048 Mycobacterium smegmatis str. MC2 155 cobalamin synthesis protein/P47K YP_890272.1 6115172 D 246196 CDS YP_890273.1 118473120 4531847 complement(6116358..6117524) 1 NC_008596.1 hypothetical protein 6117524 4531847 MSMEG_6049 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890273.1 6116358 R 246196 CDS YP_890274.1 118471448 4535123 complement(6117544..6118446) 1 NC_008596.1 identified by match to protein family HMM PF01297; solute-binding lipoprotein 6118446 4535123 MSMEG_6050 Mycobacterium smegmatis str. MC2 155 solute-binding lipoprotein YP_890274.1 6117544 R 246196 CDS YP_890275.1 118470276 4537537 6120497..6121207 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 6121207 4537537 MSMEG_6052 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_890275.1 6120497 D 246196 CDS YP_890276.1 118469341 4535931 6121140..6121799 1 NC_008596.1 identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476; cob(II)yrinic acid a,c-diamide reductase 6121799 bluB 4535931 bluB Mycobacterium smegmatis str. MC2 155 cob(II)yrinic acid a,c-diamide reductase YP_890276.1 6121140 D 246196 CDS YP_890277.1 118473670 4531241 6121823..6122608 1 NC_008596.1 identified by match to protein family HMM PF03746; LamB/YcsF family protein 6122608 4531241 MSMEG_6054 Mycobacterium smegmatis str. MC2 155 LamB/YcsF family protein YP_890277.1 6121823 D 246196 CDS YP_890278.1 118472998 4531290 complement(6122623..6122877) 1 NC_008596.1 hypothetical protein 6122877 4531290 MSMEG_6055 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890278.1 6122623 R 246196 CDS YP_890279.1 118470270 4537162 6124745..6125368 1 NC_008596.1 MspD protein 6125368 4537162 MSMEG_6057 Mycobacterium smegmatis str. MC2 155 MspD protein YP_890279.1 6124745 D 246196 CDS YP_890280.1 118467908 4531264 complement(6125473..6127611) 1 NC_008596.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525; cadmium transporting P-type ATPase 6127611 4531264 MSMEG_6058 Mycobacterium smegmatis str. MC2 155 cadmium transporting P-type ATPase YP_890280.1 6125473 R 246196 CDS YP_890281.1 118467605 4533067 complement(6127628..6127912) 1 NC_008596.1 hypothetical protein 6127912 4533067 MSMEG_6059 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890281.1 6127628 R 246196 CDS YP_890282.1 118473030 4532351 6127999..6129036 1 NC_008596.1 identified by match to protein family HMM PF03773; permease 6129036 4532351 MSMEG_6060 Mycobacterium smegmatis str. MC2 155 permease YP_890282.1 6127999 D 246196 CDS YP_890283.1 118473291 4535553 6129033..6129749 1 NC_008596.1 hypothetical protein 6129749 4535553 MSMEG_6061 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890283.1 6129033 D 246196 CDS YP_890284.1 118469480 4534454 complement(6129763..6130554) 1 NC_008596.1 identified by match to protein family HMM PF00005; Fe uptake system permease 6130554 4534454 MSMEG_6062 Mycobacterium smegmatis str. MC2 155 Fe uptake system permease YP_890284.1 6129763 R 246196 CDS YP_890285.1 118471829 4536322 complement(6130551..6131585) 1 NC_008596.1 identified by match to protein family HMM PF01032; match to protein family HMM PF02653; Fe uptake system integral membrane protein 6131585 4536322 MSMEG_6063 Mycobacterium smegmatis str. MC2 155 Fe uptake system integral membrane protein YP_890285.1 6130551 R 246196 CDS YP_890286.1 118470422 4534195 complement(6131586..6132566) 1 NC_008596.1 identified by match to protein family HMM PF01497; lipoprotein 6132566 4534195 MSMEG_6064 Mycobacterium smegmatis str. MC2 155 lipoprotein YP_890286.1 6131586 R 246196 CDS YP_890287.1 118468979 4533544 complement(6132746..6133003) 1 NC_008596.1 identified by match to protein family HMM PF01084; match to protein family HMM TIGR00165; 30S ribosomal protein S18 6133003 rpsR 4533544 rpsR Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S18 YP_890287.1 6132746 R 246196 CDS YP_890288.1 118471609 4536521 complement(6133000..6133305) 1 NC_008596.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 6133305 rpsN 4536521 rpsN Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S14 YP_890288.1 6133000 R 246196 CDS YP_890289.1 118473437 4534128 complement(6133305..6133469) 1 NC_008596.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 6133469 rpmG 4534128 rpmG Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L33 YP_890289.1 6133305 R 246196 CDS YP_890290.1 118471258 4531534 complement(6133469..6133705) 1 NC_008596.1 identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; 50S ribosomal protein L28 6133705 rpmB 4531534 rpmB Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L28 YP_890290.1 6133469 R 246196 CDS YP_890291.1 118471890 4536227 6133794..6134993 1 NC_008596.1 identified by match to protein family HMM PF07683; CobW/P47K domain-containing protein 6134993 4536227 MSMEG_6069 Mycobacterium smegmatis str. MC2 155 CobW/P47K domain-containing protein YP_890291.1 6133794 D 246196 CDS YP_890292.1 118470572 4531515 6134990..6135238 1 NC_008596.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 6135238 rpmE2 4531515 rpmE2 Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L31 YP_890292.1 6134990 D 246196 CDS YP_890293.1 118470020 4532759 6135261..6136205 1 NC_008596.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 6136205 4532759 MSMEG_6071 Mycobacterium smegmatis str. MC2 155 metallo-beta-lactamase superfamily protein YP_890293.1 6135261 D 246196 CDS YP_890294.1 118467767 4533398 6136154..6137437 1 NC_008596.1 identified by match to protein family HMM PF02040; match to protein family HMM PF03600; citrate transporter 6137437 4533398 MSMEG_6072 Mycobacterium smegmatis str. MC2 155 citrate transporter YP_890294.1 6136154 D 246196 CDS YP_890295.1 118473323 4530982 complement(6137444..6138388) 1 NC_008596.1 identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; TrmH family RNA methyltransferase 6138388 4530982 MSMEG_6073 Mycobacterium smegmatis str. MC2 155 TrmH family RNA methyltransferase YP_890295.1 6137444 R 246196 CDS YP_890296.1 118472553 4532680 complement(6138388..6139821) 1 NC_008596.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 6139821 cysS 4532680 cysS Mycobacterium smegmatis str. MC2 155 cysteinyl-tRNA synthetase YP_890296.1 6138388 R 246196 CDS YP_890297.1 118471044 4536746 complement(6139851..6140342) 1 NC_008596.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6140342 ispF 4536746 ispF Mycobacterium smegmatis str. MC2 155 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_890297.1 6139851 R 246196 CDS YP_890298.1 118469696 4536829 complement(6140339..6141007) 1 NC_008596.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6141007 ispD 4536829 ispD Mycobacterium smegmatis str. MC2 155 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_890298.1 6140339 R 246196 CDS YP_890299.1 118470459 4534522 complement(6141027..6141515) 1 NC_008596.1 identified by match to protein family HMM PF02559; CarD family transcriptional regulator 6141515 4534522 MSMEG_6077 Mycobacterium smegmatis str. MC2 155 CarD family transcriptional regulator YP_890299.1 6141027 R 246196 CDS YP_890300.1 118467981 4535163 6141800..6142360 1 NC_008596.1 LpqE protein 6142360 4535163 MSMEG_6078 Mycobacterium smegmatis str. MC2 155 LpqE protein YP_890300.1 6141800 D 246196 CDS YP_890301.1 118467526 4535537 6142417..6143817 1 NC_008596.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 6143817 radA 4535537 radA Mycobacterium smegmatis str. MC2 155 DNA repair protein RadA YP_890301.1 6142417 D 246196 CDS YP_890302.1 118473616 4531051 6143853..6144971 1 NC_008596.1 non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair; DNA integrity scanning protein DisA 6144971 4531051 MSMEG_6080 Mycobacterium smegmatis str. MC2 155 DNA integrity scanning protein DisA YP_890302.1 6143853 D 246196 CDS YP_890303.1 118471796 4536328 complement(6144973..6145758) 1 NC_008596.1 hypothetical protein 6145758 4536328 MSMEG_6081 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890303.1 6144973 R 246196 CDS YP_890304.1 118468148 4532691 complement(6145828..6146448) 1 NC_008596.1 identified by match to protein family HMM PF00484; carbonic anhydrase 6146448 4532691 MSMEG_6082 Mycobacterium smegmatis str. MC2 155 carbonic anhydrase YP_890304.1 6145828 R 246196 CDS YP_890305.1 118470417 4534190 6146474..6147355 1 NC_008596.1 identified by match to protein family HMM PF00633; match to protein family HMM PF00730; base excision DNA repair protein, HhH-GPD family protein 6147355 4534190 MSMEG_6083 Mycobacterium smegmatis str. MC2 155 base excision DNA repair protein, HhH-GPD family protein YP_890305.1 6146474 D 246196 CDS YP_890306.1 118468136 4535224 complement(6148672..6149445) 1 NC_008596.1 identified by match to protein family HMM PF00561; hydrolase, alpha/beta hydrolase fold family protein 6149445 4535224 MSMEG_6085 Mycobacterium smegmatis str. MC2 155 hydrolase, alpha/beta hydrolase fold family protein YP_890306.1 6148672 R 246196 CDS YP_890307.1 118468343 4532094 6149485..6149802 1 NC_008596.1 identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase domain-containing protein 6149802 4532094 MSMEG_6086 Mycobacterium smegmatis str. MC2 155 antibiotic biosynthesis monooxygenase domain-containing protein YP_890307.1 6149485 D 246196 CDS YP_890308.1 118470558 4531501 6149846..6151165 1 NC_008596.1 identified by match to protein family HMM PF00144; beta-lactamase 6151165 4531501 MSMEG_6087 Mycobacterium smegmatis str. MC2 155 beta-lactamase YP_890308.1 6149846 D 246196 CDS YP_890309.1 118471758 4536366 complement(6151170..6151718) 1 NC_008596.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase 6151718 4536366 MSMEG_6088 Mycobacterium smegmatis str. MC2 155 phosphoglycerate mutase YP_890309.1 6151170 R 246196 CDS YP_890310.1 118471011 4533504 complement(6151715..6152521) 1 NC_008596.1 hypothetical protein 6152521 4533504 MSMEG_6089 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890310.1 6151715 R 246196 CDS YP_890311.1 118473229 4536916 complement(6152546..6152758) 1 NC_008596.1 hypothetical protein 6152758 4536916 MSMEG_6090 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890311.1 6152546 R 246196 CDS YP_890312.1 118472509 4533739 complement(6152971..6155517) 1 NC_008596.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; negative regulator of genetic competence ClpC/mecB 6155517 4533739 MSMEG_6091 Mycobacterium smegmatis str. MC2 155 negative regulator of genetic competence ClpC/mecB YP_890312.1 6152971 R 246196 CDS YP_890313.1 118470080 4532955 6155687..6156166 1 NC_008596.1 hypothetical protein 6156166 4532955 MSMEG_6093 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890313.1 6155687 D 246196 CDS YP_890314.1 118474025 4533438 complement(6155786..6156130) 1 NC_008596.1 Lsr2 protein 6156130 4533438 MSMEG_6092 Mycobacterium smegmatis str. MC2 155 Lsr2 protein YP_890314.1 6155786 R 246196 CDS YP_890315.1 118471596 4536547 complement(6156246..6157769) 1 NC_008596.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 6157769 lysS 4536547 lysS Mycobacterium smegmatis str. MC2 155 lysyl-tRNA synthetase YP_890315.1 6156246 R 246196 CDS YP_890316.1 118468264 4533997 6157793..6159031 1 NC_008596.1 D-amino acid deaminase 6159031 4533997 MSMEG_6095 Mycobacterium smegmatis str. MC2 155 D-amino acid deaminase YP_890316.1 6157793 D 246196 CDS YP_890317.1 118471086 4537529 complement(6159032..6159847) 1 NC_008596.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 6159847 4537529 MSMEG_6096 Mycobacterium smegmatis str. MC2 155 pantothenate kinase YP_890317.1 6159032 R 246196 CDS YP_890318.1 118467890 4531246 complement(6159923..6160867) 1 NC_008596.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 6160867 panC 4531246 panC Mycobacterium smegmatis str. MC2 155 pantoate--beta-alanine ligase YP_890318.1 6159923 R 246196 CDS YP_890319.1 118467947 4533427 complement(6160864..6161811) 1 NC_008596.1 chalcone/stilbene synthase 6161811 4533427 MSMEG_6098 Mycobacterium smegmatis str. MC2 155 chalcone/stilbene synthase YP_890319.1 6160864 R 246196 CDS YP_890320.1 118470986 4531906 complement(6161892..6163442) 1 NC_008596.1 hypothetical protein 6163442 4531906 MSMEG_6099 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890320.1 6161892 R 246196 CDS YP_890321.1 118473258 4537319 complement(6163589..6164065) 1 NC_008596.1 hypothetical protein 6164065 4537319 MSMEG_6100 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890321.1 6163589 R 246196 CDS YP_890322.1 118472499 4533729 complement(6164065..6164601) 1 NC_008596.1 identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 6164601 folK 4533729 folK Mycobacterium smegmatis str. MC2 155 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_890322.1 6164065 R 246196 CDS YP_890323.1 118468866 4533751 complement(6164598..6164969) 1 NC_008596.1 identified by match to protein family HMM PF02152; match to protein family HMM TIGR00525; match to protein family HMM TIGR00526; dihydroneopterin aldolase 6164969 folB 4533751 folB Mycobacterium smegmatis str. MC2 155 dihydroneopterin aldolase YP_890323.1 6164598 R 246196 CDS YP_890324.1 118472394 4531804 complement(6164962..6165819) 1 NC_008596.1 identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 6165819 folP 4531804 folP Mycobacterium smegmatis str. MC2 155 dihydropteroate synthase YP_890324.1 6164962 R 246196 CDS YP_890325.1 118473408 4537026 complement(6165816..6166427) 1 NC_008596.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 6166427 folE 4537026 folE Mycobacterium smegmatis str. MC2 155 GTP cyclohydrolase I YP_890325.1 6165816 R 246196 CDS YP_890326.1 118473106 4531167 complement(6166447..6168759) 1 NC_008596.1 identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; cell division protein 6168759 4531167 MSMEG_6105 Mycobacterium smegmatis str. MC2 155 cell division protein YP_890326.1 6166447 R 246196 CDS YP_890327.1 118468245 4537430 6168956..6169927 1 NC_008596.1 identified by match to protein family HMM PF00561; epoxide hydrolase 6169927 4537430 MSMEG_6106 Mycobacterium smegmatis str. MC2 155 epoxide hydrolase YP_890327.1 6168956 D 246196 CDS YP_890328.1 118470157 4534335 6169927..6171114 1 NC_008596.1 identified by match to protein family HMM PF00296; limonene 1,2-monooxygenase 6171114 4534335 MSMEG_6107 Mycobacterium smegmatis str. MC2 155 limonene 1,2-monooxygenase YP_890328.1 6169927 D 246196 CDS YP_890329.1 118471110 4533468 6171114..6172130 1 NC_008596.1 identified by match to protein family HMM PF00107; zinc-binding dehydrogenase 6172130 4533468 MSMEG_6108 Mycobacterium smegmatis str. MC2 155 zinc-binding dehydrogenase YP_890329.1 6171114 D 246196 CDS YP_890330.1 118468042 4531399 6172152..6172883 1 NC_008596.1 identified by match to protein family HMM PF04402; LpqG protein 6172883 4531399 MSMEG_6109 Mycobacterium smegmatis str. MC2 155 LpqG protein YP_890330.1 6172152 D 246196 CDS YP_890331.1 118470680 4531743 complement(6172888..6173469) 1 NC_008596.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase 6173469 hpt 4531743 hpt Mycobacterium smegmatis str. MC2 155 hypoxanthine phosphoribosyltransferase YP_890331.1 6172888 R 246196 CDS YP_890332.1 118469721 4537595 complement(6173520..6174488) 1 NC_008596.1 identified by match to protein family HMM PF01171; match to protein family HMM TIGR02432; tRNA(Ile)-lysidine synthetase 6174488 tilS 4537595 tilS Mycobacterium smegmatis str. MC2 155 tRNA(Ile)-lysidine synthetase YP_890332.1 6173520 R 246196 CDS YP_890333.1 118470825 4532511 complement(6174467..6175540) 1 NC_008596.1 hypothetical protein 6175540 4532511 MSMEG_6112 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890333.1 6174467 R 246196 CDS YP_890334.1 118473480 4531184 complement(6175537..6176979) 1 NC_008596.1 identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 6176979 dacB 4531184 dacB Mycobacterium smegmatis str. MC2 155 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_890334.1 6175537 R 246196 CDS YP_890335.1 118472760 4531949 6177063..6177551 1 NC_008596.1 identified by match to protein family HMM PF00719; inorganic pyrophosphatase 6177551 ppa 4531949 ppa Mycobacterium smegmatis str. MC2 155 inorganic pyrophosphatase YP_890335.1 6177063 D 246196 CDS YP_890336.1 118469455 4535718 6177612..6178142 1 NC_008596.1 OHCU decarboxylase 6178142 4535718 MSMEG_6116 Mycobacterium smegmatis str. MC2 155 OHCU decarboxylase YP_890336.1 6177612 D 246196 CDS YP_890337.1 118470323 4535201 complement(6178118..6179122) 1 NC_008596.1 identified by match to protein family HMM PF02826; phosphoglycerate dehydrogenase 6179122 4535201 MSMEG_6115 Mycobacterium smegmatis str. MC2 155 phosphoglycerate dehydrogenase YP_890337.1 6178118 R 246196 CDS YP_890338.1 118472899 4533768 complement(6179128..6180477) 1 NC_008596.1 identified by match to protein family HMM PF01188; glucarate dehydratase 6180477 4533768 MSMEG_6117 Mycobacterium smegmatis str. MC2 155 glucarate dehydratase YP_890338.1 6179128 R 246196 CDS YP_890339.1 118472327 4534218 complement(6180503..6181303) 1 NC_008596.1 identified by match to protein family HMM PF01614; IclR-family protein transcriptional regulator 6181303 4534218 MSMEG_6118 Mycobacterium smegmatis str. MC2 155 IclR-family protein transcriptional regulator YP_890339.1 6180503 R 246196 CDS YP_890340.1 118472112 4537493 complement(6181305..6182027) 1 NC_008596.1 identified by match to protein family HMM PF01925; hypothetical protein 6182027 4537493 MSMEG_6119 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890340.1 6181305 R 246196 CDS YP_890341.1 118471134 4531821 complement(6182024..6183022) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; peptide transporter ATP-binding protein 6183022 4531821 MSMEG_6120 Mycobacterium smegmatis str. MC2 155 peptide transporter ATP-binding protein YP_890341.1 6182024 R 246196 CDS YP_890342.1 118472456 4533597 complement(6183015..6184046) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; dipeptide transport ATP-binding protein DppD 6184046 4533597 MSMEG_6121 Mycobacterium smegmatis str. MC2 155 dipeptide transport ATP-binding protein DppD YP_890342.1 6183015 R 246196 CDS YP_890343.1 118468556 4536108 complement(6184043..6185029) 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter 6185029 4536108 MSMEG_6122 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_890343.1 6184043 R 246196 CDS YP_890344.1 118470571 4531514 complement(6185038..6185967) 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter 6185967 4531514 MSMEG_6123 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_890344.1 6185038 R 246196 CDS YP_890345.1 118472069 4536709 complement(6185995..6187557) 1 NC_008596.1 identified by match to protein family HMM PF00496; peptide ABC transporter substrate-binding protein 6187557 4536709 MSMEG_6124 Mycobacterium smegmatis str. MC2 155 peptide ABC transporter substrate-binding protein YP_890345.1 6185995 R 246196 CDS YP_890346.1 118470061 4535954 6187851..6188864 1 NC_008596.1 identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase 6188864 4535954 MSMEG_6126 Mycobacterium smegmatis str. MC2 155 D-isomer specific 2-hydroxyacid dehydrogenase YP_890346.1 6187851 D 246196 CDS YP_890347.1 118467603 4531419 complement(6188858..6189787) 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulatory protein 6189787 4531419 MSMEG_6125 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_890347.1 6188858 R 246196 CDS YP_890348.1 118470980 4531900 6190044..6190403 1 NC_008596.1 identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; anti-anti-sigma factor 6190403 4531900 MSMEG_6127 Mycobacterium smegmatis str. MC2 155 anti-anti-sigma factor YP_890348.1 6190044 D 246196 CDS YP_890349.1 118470632 4532990 6190437..6190883 1 NC_008596.1 hypothetical protein 6190883 4532990 MSMEG_6129 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890349.1 6190437 D 246196 CDS YP_890350.1 118468403 4534793 complement(6190869..6191315) 1 NC_008596.1 identified by match to protein family HMM PF00072; two-component system response regulator 6191315 4534793 MSMEG_6128 Mycobacterium smegmatis str. MC2 155 two-component system response regulator YP_890350.1 6190869 R 246196 CDS YP_890351.1 118467475 4536992 complement(6191312..6192889) 1 NC_008596.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227; two-component sensor protein 6192889 4536992 MSMEG_6130 Mycobacterium smegmatis str. MC2 155 two-component sensor protein YP_890351.1 6191312 R 246196 CDS YP_890352.1 118474005 4530965 complement(6192886..6194094) 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF07228; magnesium or manganese-dependent protein phosphatase 6194094 4530965 MSMEG_6131 Mycobacterium smegmatis str. MC2 155 magnesium or manganese-dependent protein phosphatase YP_890352.1 6192886 R 246196 CDS YP_890353.1 118471773 4536344 complement(6194325..6195596) 1 NC_008596.1 identified by match to protein family HMM PF01188; glucarate dehydratase 6195596 4536344 MSMEG_6132 Mycobacterium smegmatis str. MC2 155 glucarate dehydratase YP_890353.1 6194325 R 246196 CDS YP_890354.1 118469394 4532288 complement(6195607..6196530) 1 NC_008596.1 catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase 6196530 4532288 MSMEG_6133 Mycobacterium smegmatis str. MC2 155 5-dehydro-4-deoxyglucarate dehydratase YP_890354.1 6195607 R 246196 CDS YP_890355.1 118468332 4532083 complement(6196561..6198159) 1 NC_008596.1 identified by match to protein family HMM PF00171; NADP-dependent fatty aldehyde dehydrogenase 6198159 4532083 MSMEG_6134 Mycobacterium smegmatis str. MC2 155 NADP-dependent fatty aldehyde dehydrogenase YP_890355.1 6196561 R 246196 CDS YP_890356.1 118472128 4532170 complement(6198302..6198706) 1 NC_008596.1 hypothetical protein 6198706 4532170 MSMEG_6135 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890356.1 6198302 R 246196 CDS YP_890357.1 118473920 4536986 complement(6198808..6199776) 1 NC_008596.1 identified by match to protein family HMM PF03741; membrane protein, TerC family protein 6199776 4536986 MSMEG_6136 Mycobacterium smegmatis str. MC2 155 membrane protein, TerC family protein YP_890357.1 6198808 R 246196 CDS YP_890358.1 118469636 4534097 6200005..6203940 1 NC_008596.1 identified by match to protein family HMM PF00132; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733; match to protein family HMM TIGR02353; non-ribosomal peptide synthetase 6203940 4534097 MSMEG_6137 Mycobacterium smegmatis str. MC2 155 non-ribosomal peptide synthetase YP_890358.1 6200005 D 246196 CDS YP_890359.1 118473317 4530976 6203937..6205274 1 NC_008596.1 identified by match to protein family HMM PF01433; metallopeptidase 6205274 4530976 MSMEG_6138 Mycobacterium smegmatis str. MC2 155 metallopeptidase YP_890359.1 6203937 D 246196 CDS YP_890360.1 118468896 4536689 6205271..6206551 1 NC_008596.1 membrane protein 6206551 4536689 MSMEG_6140 Mycobacterium smegmatis str. MC2 155 membrane protein YP_890360.1 6205271 D 246196 CDS YP_890361.1 118470636 4532395 complement(6206541..6207134) 1 NC_008596.1 identified by match to protein family HMM PF00440; HTH-type transcriptional regulator 6207134 4532395 MSMEG_6139 Mycobacterium smegmatis str. MC2 155 HTH-type transcriptional regulator YP_890361.1 6206541 R 246196 CDS YP_890362.1 118472578 4534357 complement(6207136..6208917) 1 NC_008596.1 N-acyl-D-glutamate amidohydrolase 6208917 4534357 MSMEG_6141 Mycobacterium smegmatis str. MC2 155 N-acyl-D-glutamate amidohydrolase YP_890362.1 6207136 R 246196 CDS YP_890363.1 118471043 4536745 complement(6208979..6209926) 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; nucleoside-diphosphate-sugar epimerase 6209926 4536745 MSMEG_6142 Mycobacterium smegmatis str. MC2 155 nucleoside-diphosphate-sugar epimerase YP_890363.1 6208979 R 246196 CDS YP_890364.1 118472669 4535089 6209977..6211740 1 NC_008596.1 hypothetical protein 6211740 4535089 MSMEG_6143 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890364.1 6209977 D 246196 CDS YP_890365.1 118470771 4531135 complement(6211742..6213193) 1 NC_008596.1 PE family protein 6213193 4531135 MSMEG_6144 Mycobacterium smegmatis str. MC2 155 PE family protein YP_890365.1 6211742 R 246196 CDS YP_890366.1 118471303 4534643 6213505..6214221 1 NC_008596.1 hypothetical protein 6214221 4534643 MSMEG_6145 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890366.1 6213505 D 246196 CDS YP_890367.1 118467516 4535527 6214302..6215708 1 NC_008596.1 identified by similarity to GP:4838457; match to protein family HMM PF01609; ISMsm3, transposase 6215708 4535527 MSMEG_6146 Mycobacterium smegmatis str. MC2 155 ISMsm3, transposase YP_890367.1 6214302 D 246196 CDS YP_890368.1 118468228 4537043 6215883..6216974 1 NC_008596.1 hypothetical protein 6216974 4537043 MSMEG_6147 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890368.1 6215883 D 246196 CDS YP_890369.1 118473974 4533045 6217061..6218383 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 6218383 4533045 MSMEG_6148 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_890369.1 6217061 D 246196 CDS YP_890370.1 118470995 4533487 complement(6218391..6219092) 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 6219092 4533487 MSMEG_6149 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_890370.1 6218391 R 246196 CDS YP_890371.1 118471312 4534652 6219676..6220032 1 NC_008596.1 identified by match to protein family HMM PF02627; 4-carboxymuconolactone decarboxylase 6220032 4534652 MSMEG_6150 Mycobacterium smegmatis str. MC2 155 4-carboxymuconolactone decarboxylase YP_890371.1 6219676 D 246196 CDS YP_890372.1 118471873 4536249 6220029..6220904 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 6220904 4536249 MSMEG_6151 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_890372.1 6220029 D 246196 CDS YP_890373.1 118469832 4532723 complement(6221127..6222335) 1 NC_008596.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the subunit beta on the DNA; DNA polymerase III subunit delta' 6222335 4532723 MSMEG_6153 Mycobacterium smegmatis str. MC2 155 DNA polymerase III subunit delta' YP_890373.1 6221127 R 246196 CDS YP_890374.1 118470462 4534525 6222417..6224108 1 NC_008596.1 identified by match to protein family HMM PF00211; match to protein family HMM PF00672; adenylate cyclase 6224108 4534525 MSMEG_6154 Mycobacterium smegmatis str. MC2 155 adenylate cyclase YP_890374.1 6222417 D 246196 CDS YP_890375.1 118468402 4534792 6224166..6225488 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 6225488 4534792 MSMEG_6155 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_890375.1 6224166 D 246196 CDS YP_890376.1 118473547 4532417 complement(6225496..6226197) 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 6226197 4532417 MSMEG_6156 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_890376.1 6225496 R 246196 CDS YP_890377.1 118467403 4535825 complement(6226360..6229170) 1 NC_008596.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 6229170 topA 4535825 topA Mycobacterium smegmatis str. MC2 155 DNA topoisomerase I YP_890377.1 6226360 R 246196 CDS YP_890378.1 118470880 4537185 complement(6229274..6229867) 1 NC_008596.1 hypothetical protein 6229867 4537185 MSMEG_6158 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890378.1 6229274 R 246196 CDS YP_890379.1 118473705 4533253 complement(6229963..6230166) 1 NC_008596.1 identified by match to protein family HMM PF00313; hypothetical protein 6230166 4533253 MSMEG_6159 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890379.1 6229963 R 246196 CDS YP_890380.1 118468463 4537284 6230468..6232798 1 NC_008596.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent rna helicase, dead/deah box family protein 6232798 4537284 MSMEG_6160 Mycobacterium smegmatis str. MC2 155 ATP-dependent rna helicase, dead/deah box family protein YP_890380.1 6230468 D 246196 CDS YP_890381.1 118467658 4535006 6233070..6234392 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 6234392 4535006 MSMEG_6161 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_890381.1 6233070 D 246196 CDS YP_890382.1 118470652 4532411 complement(6234400..6235101) 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 6235101 4532411 MSMEG_6162 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_890382.1 6234400 R 246196 CDS YP_890383.1 118472244 4532465 6235347..6236363 1 NC_008596.1 hypothetical protein 6236363 4532465 MSMEG_6163 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890383.1 6235347 D 246196 CDS YP_890384.1 118471259 4531535 6236388..6236831 1 NC_008596.1 hypothetical protein 6236831 4531535 MSMEG_6166 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890384.1 6236388 D 246196 CDS YP_890385.1 118471762 4536371 complement(6236448..6236774) 1 NC_008596.1 hypothetical protein 6236774 4536371 MSMEG_6164 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890385.1 6236448 R 246196 CDS YP_890386.1 118470056 4534601 complement(6236785..6237345) 1 NC_008596.1 hypothetical protein 6237345 4534601 MSMEG_6165 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890386.1 6236785 R 246196 CDS YP_890387.1 118471127 4531814 complement(6237351..6237920) 1 NC_008596.1 identified by match to protein family HMM PF00482; type II secretion system protein F 6237920 4531814 MSMEG_6167 Mycobacterium smegmatis str. MC2 155 type II secretion system protein F YP_890387.1 6237351 R 246196 CDS YP_890388.1 118474017 4533430 complement(6237917..6238549) 1 NC_008596.1 identified by match to protein family HMM PF00482; type II secretion system protein F 6238549 4533430 MSMEG_6168 Mycobacterium smegmatis str. MC2 155 type II secretion system protein F YP_890388.1 6237917 R 246196 CDS YP_890389.1 118472338 4534229 6238524..6238718 1 NC_008596.1 hypothetical protein 6238718 4534229 MSMEG_6170 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890389.1 6238524 D 246196 CDS YP_890390.1 118467984 4535166 complement(6238696..6239853) 1 NC_008596.1 identified by match to protein family HMM PF00437; type II/IV secretion system protein 6239853 4535166 MSMEG_6169 Mycobacterium smegmatis str. MC2 155 type II/IV secretion system protein YP_890390.1 6238696 R 246196 CDS YP_890391.1 118472134 4532471 complement(6239850..6240800) 1 NC_008596.1 hypothetical protein 6240800 4532471 MSMEG_6171 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890391.1 6239850 R 246196 CDS YP_890392.1 118473246 4537306 complement(6240784..6241332) 1 NC_008596.1 hypothetical protein 6241332 4537306 MSMEG_6172 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890392.1 6240784 R 246196 CDS YP_890393.1 118469266 4532236 6241372..6242253 1 NC_008596.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; morphological differentiation-associated protein 6242253 4532236 MSMEG_6173 Mycobacterium smegmatis str. MC2 155 morphological differentiation-associated protein YP_890393.1 6241372 D 246196 CDS YP_890394.1 118472199 4530857 complement(6242692..6243474) 1 NC_008596.1 identified by match to protein family HMM PF01614; IclR family transcriptional regulator 6243474 4530857 MSMEG_6174 Mycobacterium smegmatis str. MC2 155 IclR family transcriptional regulator YP_890394.1 6242692 R 246196 CDS YP_890395.1 118467415 4536031 6243569..6244549 1 NC_008596.1 identified by match to protein family HMM PF05035; 2-keto-3-deoxy-galactonokinase 6244549 4536031 MSMEG_6175 Mycobacterium smegmatis str. MC2 155 2-keto-3-deoxy-galactonokinase YP_890395.1 6243569 D 246196 CDS YP_890396.1 118469446 4534822 6244546..6245172 1 NC_008596.1 identified by match to protein family HMM PF01081; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 6245172 4534822 MSMEG_6176 Mycobacterium smegmatis str. MC2 155 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_890396.1 6244546 D 246196 CDS YP_890397.1 118471178 4534964 6245169..6246317 1 NC_008596.1 identified by match to protein family HMM PF01188; match to protein family HMM PF02746; galactonate dehydratase 6246317 4534964 MSMEG_6177 Mycobacterium smegmatis str. MC2 155 galactonate dehydratase YP_890397.1 6245169 D 246196 CDS YP_890398.1 118470057 4534602 6246323..6247654 1 NC_008596.1 identified by match to protein family HMM PF07690; D-galactonate transporter 6247654 4534602 MSMEG_6178 Mycobacterium smegmatis str. MC2 155 D-galactonate transporter YP_890398.1 6246323 D 246196 CDS YP_890399.1 118467355 4534714 6247672..6250494 1 NC_008596.1 identified by match to protein family HMM PF00501; match to protein family HMM TIGR02188; acetyl-coenzyme A synthetase 6250494 4534714 MSMEG_6179 Mycobacterium smegmatis str. MC2 155 acetyl-coenzyme A synthetase YP_890399.1 6247672 D 246196 CDS YP_890400.1 118469331 4535921 complement(6250558..6251238) 1 NC_008596.1 hypothetical protein 6251238 4535921 MSMEG_6180 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890400.1 6250558 R 246196 CDS YP_890401.1 118467426 4536042 complement(6251348..6251857) 1 NC_008596.1 hypothetical protein 6251857 4536042 MSMEG_6181 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890401.1 6251348 R 246196 CDS YP_890402.1 118472398 4531808 6251411..6251920 1 NC_008596.1 identified by match to protein family HMM PF07332; hypothetical protein 6251920 4531808 MSMEG_6182 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890402.1 6251411 D 246196 CDS YP_890403.1 118470871 4536803 6251920..6252870 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 6252870 4536803 MSMEG_6184 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_890403.1 6251920 D 246196 CDS YP_890404.1 118469436 4534332 complement(6252860..6254050) 1 NC_008596.1 identified by match to protein family HMM PF00089; match to protein family HMM PF02674; serine protease 6254050 4534332 MSMEG_6183 Mycobacterium smegmatis str. MC2 155 serine protease YP_890404.1 6252860 R 246196 CDS YP_890405.1 118472919 4531208 complement(6254050..6254838) 1 NC_008596.1 identified by match to protein family HMM PF00293; NTP pyrophosphohydrolase 6254838 4531208 MSMEG_6185 Mycobacterium smegmatis str. MC2 155 NTP pyrophosphohydrolase YP_890405.1 6254050 R 246196 CDS YP_890406.1 118470253 4537144 complement(6254850..6255497) 1 NC_008596.1 hypothetical protein 6255497 4537144 MSMEG_6186 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890406.1 6254850 R 246196 CDS YP_890407.1 118467497 4537384 complement(6255512..6256291) 1 NC_008596.1 identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III 6256291 nth 4537384 nth Mycobacterium smegmatis str. MC2 155 endonuclease III YP_890407.1 6255512 R 246196 CDS YP_890408.1 118468203 4536644 6256441..6256734 1 NC_008596.1 hypothetical protein 6256734 4536644 MSMEG_6188 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890408.1 6256441 D 246196 CDS YP_890409.1 118469023 4530875 6256824..6257498 1 NC_008596.1 identified by match to protein family HMM PF00027; match to protein family HMM PF00325; Crp/Fnr family transcriptional regulator protein 6257498 4530875 MSMEG_6189 Mycobacterium smegmatis str. MC2 155 Crp/Fnr family transcriptional regulator protein YP_890409.1 6256824 D 246196 CDS YP_890410.1 118473784 4535142 complement(6257583..6258377) 1 NC_008596.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase 6258377 4535142 MSMEG_6190 Mycobacterium smegmatis str. MC2 155 metallo-beta-lactamase YP_890410.1 6257583 R 246196 CDS YP_890411.1 118469169 4534276 complement(6258374..6258850) 1 NC_008596.1 identified by match to protein family HMM PF01042; translation initiation inhibitor 6258850 4534276 MSMEG_6191 Mycobacterium smegmatis str. MC2 155 translation initiation inhibitor YP_890411.1 6258374 R 246196 CDS YP_890412.1 118469530 4537104 complement(6258847..6259008) 1 NC_008596.1 hypothetical protein 6259008 4537104 MSMEG_6192 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890412.1 6258847 R 246196 CDS YP_890413.1 118470486 4537170 6259056..6260090 1 NC_008596.1 identified by match to protein family HMM PF02374; anion-transporting ATPase 6260090 4537170 MSMEG_6193 Mycobacterium smegmatis str. MC2 155 anion-transporting ATPase YP_890413.1 6259056 D 246196 CDS YP_890414.1 118468956 4532619 6260087..6261217 1 NC_008596.1 identified by match to protein family HMM PF02374; ion-transporting ATPase 6261217 4532619 MSMEG_6195 Mycobacterium smegmatis str. MC2 155 ion-transporting ATPase YP_890414.1 6260087 D 246196 CDS YP_890415.1 118467441 4535450 complement(6261214..6262032) 1 NC_008596.1 beta-lactamase related protein 6262032 4535450 MSMEG_6194 Mycobacterium smegmatis str. MC2 155 beta-lactamase related protein YP_890415.1 6261214 R 246196 CDS YP_890416.1 118468494 4537683 complement(6262025..6263446) 1 NC_008596.1 identified by match to protein family HMM PF00324; match to protein family HMM PF03845; gaba permease 6263446 4537683 MSMEG_6196 Mycobacterium smegmatis str. MC2 155 gaba permease YP_890416.1 6262025 R 246196 CDS YP_890417.1 118472318 4532906 complement(6263460..6264839) 1 NC_008596.1 identified by match to protein family HMM PF00278; match to protein family HMM PF02784; diaminopimelate decarboxylase 6264839 4532906 MSMEG_6197 Mycobacterium smegmatis str. MC2 155 diaminopimelate decarboxylase YP_890417.1 6263460 R 246196 CDS YP_890418.1 118473778 4535135 complement(6264963..6266579) 1 NC_008596.1 identified by match to protein family HMM PF02954; DNA-binding protein 6266579 4535135 MSMEG_6198 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_890418.1 6264963 R 246196 CDS YP_890419.1 118467627 4534201 complement(6266743..6267099) 1 NC_008596.1 identified by match to protein family HMM PF02467; transcription factor WhiB 6267099 4534201 MSMEG_6199 Mycobacterium smegmatis str. MC2 155 transcription factor WhiB YP_890419.1 6266743 R 246196 CDS YP_890420.1 118469692 4536825 complement(6267234..6267377) 1 NC_008596.1 hypothetical protein 6267377 4536825 MSMEG_6200 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890420.1 6267234 R 246196 CDS YP_890421.1 118468607 4532387 6267483..6269849 1 NC_008596.1 identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM PF03793; transglycosylase 6269849 4532387 MSMEG_6201 Mycobacterium smegmatis str. MC2 155 transglycosylase YP_890421.1 6267483 D 246196 CDS YP_890422.1 118471478 4531879 6269949..6270935 1 NC_008596.1 identified by match to protein family HMM PF00149; hypothetical protein 6270935 4531879 MSMEG_6202 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890422.1 6269949 D 246196 CDS YP_890423.1 118472420 4531342 6270944..6272041 1 NC_008596.1 identified by match to protein family HMM PF00291; cysteine synthase/cystathionine beta-synthase 6272041 4531342 MSMEG_6203 Mycobacterium smegmatis str. MC2 155 cysteine synthase/cystathionine beta-synthase YP_890423.1 6270944 D 246196 CDS YP_890424.1 118473260 4537689 6272624..6272785 1 NC_008596.1 hypothetical protein 6272785 4537689 MSMEG_6205 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890424.1 6272624 D 246196 CDS YP_890425.1 118472763 4531854 complement(6272798..6274021) 1 NC_008596.1 identified by match to protein family HMM PF00069; serine/threonine protein kinase 6274021 4531854 MSMEG_6206 Mycobacterium smegmatis str. MC2 155 serine/threonine protein kinase YP_890425.1 6272798 R 246196 CDS YP_890426.1 118467900 4531256 6274084..6274581 1 NC_008596.1 hypothetical protein 6274581 4531256 MSMEG_6207 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890426.1 6274084 D 246196 CDS YP_890427.1 118468689 4535912 6274619..6275416 1 NC_008596.1 identified by match to protein family HMM PF02551; palmitoyl-CoA hydrolase 6275416 4535912 MSMEG_6208 Mycobacterium smegmatis str. MC2 155 palmitoyl-CoA hydrolase YP_890427.1 6274619 D 246196 CDS YP_890428.1 118470508 4537561 6275481..6275699 1 NC_008596.1 hypothetical protein 6275699 4537561 MSMEG_6209 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890428.1 6275481 D 246196 CDS YP_890429.1 118470387 4533448 6275706..6276398 1 NC_008596.1 hypothetical protein 6276398 4533448 MSMEG_6210 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890429.1 6275706 D 246196 CDS YP_890430.1 118469919 4535573 complement(6276404..6276556) 1 NC_008596.1 hypothetical protein 6276556 4535573 MSMEG_6211 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890430.1 6276404 R 246196 CDS YP_890431.1 118469967 4535741 6276681..6277265 1 NC_008596.1 hemerythrin HHE cation binding domain-containing protein 6277265 4535741 MSMEG_6212 Mycobacterium smegmatis str. MC2 155 hemerythrin HHE cation binding domain-containing protein YP_890431.1 6276681 D 246196 CDS YP_890432.1 118473739 4537344 complement(6277327..6278220) 1 NC_008596.1 identified by match to protein family HMM PF05067; manganese containing catalase 6278220 4537344 MSMEG_6213 Mycobacterium smegmatis str. MC2 155 manganese containing catalase YP_890432.1 6277327 R 246196 CDS YP_890433.1 118472316 4532904 complement(6278296..6278760) 1 NC_008596.1 identified by match to protein family HMM PF02637; GatB/Yqey domain-containing protein 6278760 4532904 MSMEG_6214 Mycobacterium smegmatis str. MC2 155 GatB/Yqey domain-containing protein YP_890433.1 6278296 R 246196 CDS YP_890434.1 118469090 4537646 complement(6278771..6279496) 1 NC_008596.1 identified by match to protein family HMM PF04402; hypothetical protein 6279496 4537646 MSMEG_6215 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890434.1 6278771 R 246196 CDS YP_890435.1 118468350 4533949 6279519..6280592 1 NC_008596.1 integral membrane protein 6280592 4533949 MSMEG_6216 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_890435.1 6279519 D 246196 CDS YP_890436.1 118473014 4532335 6280594..6281244 1 NC_008596.1 integral membrane protein 6281244 4532335 MSMEG_6217 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_890436.1 6280594 D 246196 CDS YP_890437.1 118472251 4531560 6281226..6282347 1 NC_008596.1 hypothetical protein 6282347 4531560 MSMEG_6218 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890437.1 6281226 D 246196 CDS YP_890438.1 118469844 4532735 6282344..6283315 1 NC_008596.1 identified by match to protein family HMM PF07726; match to protein family HMM PF07728; ATPase AAA 6283315 4532735 MSMEG_6219 Mycobacterium smegmatis str. MC2 155 ATPase AAA YP_890438.1 6282344 D 246196 CDS YP_890439.1 118468685 4535908 6283315..6284637 1 NC_008596.1 identified by match to protein family HMM PF01882; lipoprotein 6284637 4535908 MSMEG_6220 Mycobacterium smegmatis str. MC2 155 lipoprotein YP_890439.1 6283315 D 246196 CDS YP_890440.1 118471842 4536296 complement(6284642..6285634) 1 NC_008596.1 integral membrane protein 6285634 4536296 MSMEG_6221 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_890440.1 6284642 R 246196 CDS YP_890441.1 118470769 4531132 6285668..6286591 1 NC_008596.1 identified by match to protein family HMM PF06271; integral membrane protein 6286591 4531132 MSMEG_6222 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_890441.1 6285668 D 246196 CDS YP_890442.1 118470129 4534500 6286641..6287210 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 6287210 4534500 MSMEG_6223 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890442.1 6286641 D 246196 CDS YP_890443.1 118468398 4534787 6287282..6288796 1 NC_008596.1 identified by match to protein family HMM PF07690; proton antiporter efflux pump 6288796 4534787 MSMEG_6225 Mycobacterium smegmatis str. MC2 155 proton antiporter efflux pump YP_890443.1 6287282 D 246196 CDS YP_890444.1 118468586 4532713 complement(6288786..6290105) 1 NC_008596.1 identified by match to protein family HMM PF03055; retinal pigment epithelial membrane protein 6290105 4532713 MSMEG_6224 Mycobacterium smegmatis str. MC2 155 retinal pigment epithelial membrane protein YP_890444.1 6288786 R 246196 CDS YP_890445.1 118467474 4536991 6290191..6290715 1 NC_008596.1 identified by match to protein family HMM PF03551; transcriptional regulator 6290715 4536991 MSMEG_6226 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_890445.1 6290191 D 246196 CDS YP_890446.1 118468935 4537469 6290798..6291538 1 NC_008596.1 identified by match to protein family HMM PF03551; PadR family transcriptional regulator 6291538 4537469 MSMEG_6227 Mycobacterium smegmatis str. MC2 155 PadR family transcriptional regulator YP_890446.1 6290798 D 246196 CDS YP_890447.1 118470990 4531910 6291559..6292239 1 NC_008596.1 hypothetical protein 6292239 4531910 MSMEG_6228 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890447.1 6291559 D 246196 CDS YP_890448.1 118467417 4536033 complement(6292243..6293760) 1 NC_008596.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 6293760 glpK 4536033 glpK Mycobacterium smegmatis str. MC2 155 glycerol kinase YP_890448.1 6292243 R 246196 CDS YP_890449.1 118469319 4533384 6293807..6294562 1 NC_008596.1 hypothetical protein 6294562 4533384 MSMEG_6231 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890449.1 6293807 D 246196 CDS YP_890450.1 118473045 4533198 complement(6294559..6295710) 1 NC_008596.1 identified by match to protein family HMM PF01757; acyltransferase 6295710 4533198 MSMEG_6230 Mycobacterium smegmatis str. MC2 155 acyltransferase YP_890450.1 6294559 R 246196 CDS YP_890451.1 118468544 4536096 complement(6295741..6297402) 1 NC_008596.1 identified by similarity to SP:P26901; match to protein family HMM PF00199; catalase KatA 6297402 katA 4536096 katA Mycobacterium smegmatis str. MC2 155 catalase KatA YP_890451.1 6295741 R 246196 CDS YP_890452.1 118472019 4533620 complement(6297491..6298297) 1 NC_008596.1 hypothetical protein 6298297 4533620 MSMEG_6233 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890452.1 6297491 R 246196 CDS YP_890453.1 118468017 4533098 6298376..6299845 1 NC_008596.1 hypothetical protein 6299845 4533098 MSMEG_6234 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890453.1 6298376 D 246196 CDS YP_890454.1 118467923 4532656 6299856..6300536 1 NC_008596.1 identified by match to protein family HMM PF05724; thiopurine S-methyltransferase (tpmt) superfamily protein 6300536 4532656 MSMEG_6235 Mycobacterium smegmatis str. MC2 155 thiopurine S-methyltransferase (tpmt) superfamily protein YP_890454.1 6299856 D 246196 CDS YP_890455.1 118470445 4534508 6300742..6301623 1 NC_008596.1 hypothetical protein 6301623 4534508 MSMEG_6237 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890455.1 6300742 D 246196 CDS YP_890456.1 118473768 4537744 complement(6301620..6302270) 1 NC_008596.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; two-component system, regulatory protein 6302270 4537744 MSMEG_6236 Mycobacterium smegmatis str. MC2 155 two-component system, regulatory protein YP_890456.1 6301620 R 246196 CDS YP_890457.1 118471418 4532801 complement(6302267..6303418) 1 NC_008596.1 identified by match to protein family HMM PF02518; match to protein family HMM PF07730; two-component system sensor kinase 6303418 4532801 MSMEG_6238 Mycobacterium smegmatis str. MC2 155 two-component system sensor kinase YP_890457.1 6302267 R 246196 CDS YP_890458.1 118469102 4535294 complement(6303617..6304816) 1 NC_008596.1 identified by match to protein family HMM PF00465; 1,3-propanediol dehydrogenase 6304816 4535294 MSMEG_6239 Mycobacterium smegmatis str. MC2 155 1,3-propanediol dehydrogenase YP_890458.1 6303617 R 246196 CDS YP_890459.1 118472634 4537653 complement(6304953..6306446) 1 NC_008596.1 identified by match to protein family HMM PF05762; hypothetical protein 6306446 4537653 MSMEG_6240 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890459.1 6304953 R 246196 CDS YP_890460.1 118472021 4534101 complement(6306443..6307501) 1 NC_008596.1 identified by match to protein family HMM PF07728; ATPase AAA 6307501 4534101 MSMEG_6241 Mycobacterium smegmatis str. MC2 155 ATPase AAA YP_890460.1 6306443 R 246196 CDS YP_890461.1 118471656 4536493 complement(6307532..6308803) 1 NC_008596.1 identified by match to protein family HMM PF00465; alcohol dehydrogenase 6308803 4536493 MSMEG_6242 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_890461.1 6307532 R 246196 CDS YP_890462.1 118470456 4534519 complement(6308975..6309448) 1 NC_008596.1 identified by match to protein family HMM PF07080; response regulator receiver domain-containing protein 6309448 4534519 MSMEG_6243 Mycobacterium smegmatis str. MC2 155 response regulator receiver domain-containing protein YP_890462.1 6308975 R 246196 CDS YP_890463.1 118468617 4535015 6309530..6310090 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 6310090 4535015 MSMEG_6244 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890463.1 6309530 D 246196 CDS YP_890464.1 118469226 4533280 complement(6310092..6311297) 1 NC_008596.1 identified by match to protein family HMM PF06779; match to protein family HMM PF07690; chloramphenicol resistance protein 6311297 4533280 MSMEG_6245 Mycobacterium smegmatis str. MC2 155 chloramphenicol resistance protein YP_890464.1 6310092 R 246196 CDS YP_890465.1 118468029 4531386 complement(6311487..6312602) 1 NC_008596.1 identified by match to protein family HMM PF00266; pyridoxal-phosphate-dependent transferase 6312602 4531386 MSMEG_6246 Mycobacterium smegmatis str. MC2 155 pyridoxal-phosphate-dependent transferase YP_890465.1 6311487 R 246196 CDS YP_890466.1 118473274 4537704 complement(6312599..6313564) 1 NC_008596.1 hypothetical protein 6313564 4537704 MSMEG_6247 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890466.1 6312599 R 246196 CDS YP_890467.1 118472548 4532675 complement(6313576..6314259) 1 NC_008596.1 hypothetical protein 6314259 4532675 MSMEG_6248 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890467.1 6313576 R 246196 CDS YP_890468.1 118468068 4533015 complement(6314259..6315545) 1 NC_008596.1 identified by match to protein family HMM PF03781; hypothetical protein 6315545 4533015 MSMEG_6249 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890468.1 6314259 R 246196 CDS YP_890469.1 118472232 4532453 complement(6315542..6316813) 1 NC_008596.1 identified by match to protein family HMM PF04107; glutamate--cysteine ligase 6316813 4532453 MSMEG_6250 Mycobacterium smegmatis str. MC2 155 glutamate--cysteine ligase YP_890469.1 6315542 R 246196 CDS YP_890470.1 118473332 4530991 complement(6316930..6317583) 1 NC_008596.1 hypothetical protein 6317583 4530991 MSMEG_6251 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890470.1 6316930 R 246196 CDS YP_890471.1 118467342 4534701 complement(6317589..6318017) 1 NC_008596.1 hypothetical protein 6318017 4534701 MSMEG_6252 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890471.1 6317589 R 246196 CDS YP_890472.1 118472029 4534109 complement(6318227..6318691) 1 NC_008596.1 identified by match to protein family HMM PF01475; fur family protein transcriptional regulator 6318691 4534109 MSMEG_6253 Mycobacterium smegmatis str. MC2 155 fur family protein transcriptional regulator YP_890472.1 6318227 R 246196 CDS YP_890473.1 118472795 4533138 complement(6318744..6319214) 1 NC_008596.1 hypothetical protein 6319214 4533138 MSMEG_6254 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890473.1 6318744 R 246196 CDS YP_890474.1 118470566 4531509 complement(6319355..6320461) 1 NC_008596.1 hypothetical protein 6320461 4531509 MSMEG_6255 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890474.1 6319355 R 246196 CDS YP_890475.1 118473027 4532348 complement(6320473..6321513) 1 NC_008596.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 6321513 asd 4532348 asd Mycobacterium smegmatis str. MC2 155 aspartate-semialdehyde dehydrogenase YP_890475.1 6320473 R 246196 CDS YP_890476.1 118471443 4535118 complement(6321515..6322780) 1 NC_008596.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 6322780 4535118 MSMEG_6257 Mycobacterium smegmatis str. MC2 155 aspartate kinase YP_890476.1 6321515 R 246196 CDS YP_890477.1 118467531 4535993 6322878..6323498 1 NC_008596.1 identified by match to protein family HMM PF00881; nitroreductase 6323498 4535993 MSMEG_6258 Mycobacterium smegmatis str. MC2 155 nitroreductase YP_890477.1 6322878 D 246196 CDS YP_890478.1 118472764 4531855 6323614..6324864 1 NC_008596.1 identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836; ammonium transporter 6324864 amt 4531855 amt Mycobacterium smegmatis str. MC2 155 ammonium transporter YP_890478.1 6323614 D 246196 CDS YP_890479.1 118471322 4534835 6324998..6326302 1 NC_008596.1 identified by match to protein family HMM PF00120; match to protein family HMM TIGR03105; glutamine synthetase 6326302 glnT 4534835 glnT Mycobacterium smegmatis str. MC2 155 glutamine synthetase YP_890479.1 6324998 D 246196 CDS YP_890480.1 118469039 4536853 6326334..6327203 1 NC_008596.1 identified by match to protein family HMM PF00310; glutamine amidotransferase 6327203 4536853 MSMEG_6261 Mycobacterium smegmatis str. MC2 155 glutamine amidotransferase YP_890480.1 6326334 D 246196 CDS YP_890481.1 118473931 4537369 6327191..6327886 1 NC_008596.1 identified by match to protein family HMM PF01493; FwdC/FmdC family protein 6327886 4537369 MSMEG_6262 Mycobacterium smegmatis str. MC2 155 FwdC/FmdC family protein YP_890481.1 6327191 D 246196 CDS YP_890482.1 118471237 4534424 6327886..6329226 1 NC_008596.1 identified by match to protein family HMM PF01070; match to protein family HMM PF01180; match to protein family HMM PF01645; glutamate synthase 6329226 4534424 MSMEG_6263 Mycobacterium smegmatis str. MC2 155 glutamate synthase YP_890482.1 6327886 D 246196 CDS YP_890483.1 118468682 4535905 6329223..6330410 1 NC_008596.1 identified by match to protein family HMM PF01266; oxidoreductase 6330410 4535905 MSMEG_6264 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_890483.1 6329223 D 246196 CDS YP_890484.1 118472815 4536669 6330437..6331087 1 NC_008596.1 identified by match to protein family HMM PF01381; match to protein family HMM PF07883; transcriptional regulator 6331087 4536669 MSMEG_6265 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_890484.1 6330437 D 246196 CDS YP_890485.1 118473519 4533881 6331259..6332059 1 NC_008596.1 thiocyanate hydrolase subunit beta 6332059 4533881 MSMEG_6266 Mycobacterium smegmatis str. MC2 155 thiocyanate hydrolase subunit beta YP_890485.1 6331259 D 246196 CDS YP_890486.1 118470813 4531923 6332056..6332766 1 NC_008596.1 identified by match to protein family HMM PF02979; thiocyanate hydrolase subunit gamma 6332766 4531923 MSMEG_6267 Mycobacterium smegmatis str. MC2 155 thiocyanate hydrolase subunit gamma YP_890486.1 6332056 D 246196 CDS YP_890487.1 118472942 4531758 6332779..6333120 1 NC_008596.1 ScnB protein 6333120 4531758 MSMEG_6268 Mycobacterium smegmatis str. MC2 155 ScnB protein YP_890487.1 6332779 D 246196 CDS YP_890488.1 118473608 4531043 6333151..6334521 1 NC_008596.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01769; match to protein family HMM PF03448; match to protein family HMM TIGR00400; magnesium transporter 6334521 mgtE 4531043 mgtE Mycobacterium smegmatis str. MC2 155 magnesium transporter YP_890488.1 6333151 D 246196 CDS YP_890489.1 118468240 4537425 complement(6334613..6334762) 1 NC_008596.1 hypothetical protein 6334762 4537425 MSMEG_6270 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890489.1 6334613 R 246196 CDS YP_890490.1 118470831 4532517 6334688..6336496 1 NC_008596.1 identified by match to protein family HMM PF00682; match to protein family HMM TIGR00970; 2-isopropylmalate synthase 6336496 leuA 4532517 leuA Mycobacterium smegmatis str. MC2 155 2-isopropylmalate synthase YP_890490.1 6334688 D 246196 CDS YP_890491.1 118469685 4536818 6336680..6339892 1 NC_008596.1 identified by match to protein family HMM PF05088; NAD-glutamate dehydrogenase 6339892 4536818 MSMEG_6272 Mycobacterium smegmatis str. MC2 155 NAD-glutamate dehydrogenase YP_890491.1 6336680 D 246196 CDS YP_890492.1 118467749 4535649 6340016..6340402 1 NC_008596.1 integral membrane protein 6340402 4535649 MSMEG_6273 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_890492.1 6340016 D 246196 CDS YP_890493.1 118471287 4532181 6340183..6340407 1 NC_008596.1 hypothetical protein 6340407 4532181 MSMEG_6274 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890493.1 6340183 D 246196 CDS YP_890494.1 118473161 4532602 complement(6340409..6341422) 1 NC_008596.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 6341422 4532602 MSMEG_6275 Mycobacterium smegmatis str. MC2 155 DNA polymerase III subunit epsilon YP_890494.1 6340409 R 246196 CDS YP_890495.1 118473806 4531285 6341496..6342719 1 NC_008596.1 mur ligase 6342719 4531285 MSMEG_6276 Mycobacterium smegmatis str. MC2 155 mur ligase YP_890495.1 6341496 D 246196 CDS YP_890496.1 118469038 4536852 6342716..6343435 1 NC_008596.1 identified by match to protein family HMM PF07685; cobyric acid synthase 6343435 4536852 MSMEG_6277 Mycobacterium smegmatis str. MC2 155 cobyric acid synthase YP_890496.1 6342716 D 246196 CDS YP_890497.1 118473188 4533305 complement(6343526..6344236) 1 NC_008596.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 6344236 4533305 MSMEG_6278 Mycobacterium smegmatis str. MC2 155 metallo-beta-lactamase superfamily protein YP_890497.1 6343526 R 246196 CDS YP_890498.1 118473908 4536974 complement(6344309..6344920) 1 NC_008596.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 6344920 recR 4536974 recR Mycobacterium smegmatis str. MC2 155 recombination protein RecR YP_890498.1 6344309 R 246196 CDS YP_890499.1 118468755 4534244 complement(6344931..6345239) 1 NC_008596.1 identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103; hypothetical protein 6345239 4534244 MSMEG_6280 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890499.1 6344931 R 246196 CDS YP_890500.1 118469677 4535440 6345388..6346182 1 NC_008596.1 identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase 6346182 4535440 MSMEG_6281 Mycobacterium smegmatis str. MC2 155 N-acetylmuramoyl-L-alanine amidase YP_890500.1 6345388 D 246196 CDS YP_890501.1 118471097 4535862 complement(6346190..6346627) 1 NC_008596.1 KanY protein 6346627 4535862 MSMEG_6282 Mycobacterium smegmatis str. MC2 155 KanY protein YP_890501.1 6346190 R 246196 CDS YP_890502.1 118471847 4536301 6346717..6348117 1 NC_008596.1 identified by match to protein family HMM PF01565; FAD binding domain-containing protein 6348117 4536301 MSMEG_6283 Mycobacterium smegmatis str. MC2 155 FAD binding domain-containing protein YP_890502.1 6346717 D 246196 CDS YP_890503.1 118472433 4532050 6348114..6349427 1 NC_008596.1 identified by match to protein family HMM PF02353; cyclopropane-fatty-acyl-phospholipid synthase 6349427 4532050 MSMEG_6284 Mycobacterium smegmatis str. MC2 155 cyclopropane-fatty-acyl-phospholipid synthase YP_890503.1 6348114 D 246196 CDS YP_890504.1 118469964 4535738 complement(6349463..6351460) 1 NC_008596.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 6351460 4535738 MSMEG_6285 Mycobacterium smegmatis str. MC2 155 DNA polymerase III subunits gamma and tau YP_890504.1 6349463 R 246196 CDS YP_890505.1 118468930 4537464 complement(6351487..6352773) 1 NC_008596.1 identified by match to protein family HMM PF00155; aspartate transaminase 6352773 4537464 MSMEG_6286 Mycobacterium smegmatis str. MC2 155 aspartate transaminase YP_890505.1 6351487 R 246196 CDS YP_890506.1 118470427 4532218 6353155..6354036 1 NC_008596.1 hypothetical protein 6354036 4532218 MSMEG_6288 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890506.1 6353155 D 246196 CDS YP_890507.1 118468378 4532927 6354081..6355103 1 NC_008596.1 identified by match to protein family HMM PF00089; match to protein family HMM PF00595; trypsin 6355103 4532927 MSMEG_6289 Mycobacterium smegmatis str. MC2 155 trypsin YP_890507.1 6354081 D 246196 CDS YP_890508.1 118473598 4531033 6355142..6356653 1 NC_008596.1 DNA-binding protein 6356653 4531033 MSMEG_6290 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_890508.1 6355142 D 246196 CDS YP_890509.1 118467911 4532644 6356801..6358051 1 NC_008596.1 identified by match to protein family HMM PF01266; D-amino-acid dehydrogenase 6358051 4532644 MSMEG_6291 Mycobacterium smegmatis str. MC2 155 D-amino-acid dehydrogenase YP_890509.1 6356801 D 246196 CDS YP_890510.1 118469742 4532027 6358172..6358645 1 NC_008596.1 identified by match to protein family HMM PF01272; transcription elongation factor GreA 6358645 4532027 MSMEG_6292 Mycobacterium smegmatis str. MC2 155 transcription elongation factor GreA YP_890510.1 6358172 D 246196 CDS YP_890511.1 118473949 4533895 6358686..6359258 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulatory protein 6359258 4533895 MSMEG_6293 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_890511.1 6358686 D 246196 CDS YP_890512.1 118471313 4534653 6359407..6360657 1 NC_008596.1 identified by match to protein family HMM PF02515; caib/baif family protein 6360657 4534653 MSMEG_6294 Mycobacterium smegmatis str. MC2 155 caib/baif family protein YP_890512.1 6359407 D 246196 CDS YP_890513.1 118470873 4536805 6360654..6362012 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; shikimate transporter 6362012 4536805 MSMEG_6295 Mycobacterium smegmatis str. MC2 155 shikimate transporter YP_890513.1 6360654 D 246196 CDS YP_890514.1 118470124 4534495 6362009..6363139 1 NC_008596.1 identified by match to protein family HMM PF00107; 5-exo-alcohol dehydrogenase 6363139 4534495 MSMEG_6296 Mycobacterium smegmatis str. MC2 155 5-exo-alcohol dehydrogenase YP_890514.1 6362009 D 246196 CDS YP_890515.1 118469837 4532728 6363136..6364671 1 NC_008596.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 6364671 4532728 MSMEG_6297 Mycobacterium smegmatis str. MC2 155 aldehyde dehydrogenase YP_890515.1 6363136 D 246196 CDS YP_890516.1 118468407 4534549 6364671..6365567 1 NC_008596.1 identified by match to protein family HMM PF03328; malyl-CoA lyase 6365567 4534549 MSMEG_6298 Mycobacterium smegmatis str. MC2 155 malyl-CoA lyase YP_890516.1 6364671 D 246196 CDS YP_890517.1 118472396 4531806 6365564..6366517 1 NC_008596.1 identified by match to protein family HMM PF00389; match to protein family HMM PF02826; glyoxylate reductase 6366517 4531806 MSMEG_6299 Mycobacterium smegmatis str. MC2 155 glyoxylate reductase YP_890517.1 6365564 D 246196 CDS YP_890518.1 118471599 4536550 6366544..6367221 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 6367221 4536550 MSMEG_6300 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_890518.1 6366544 D 246196 CDS YP_890519.1 118468272 4535759 complement(6367237..6368289) 1 NC_008596.1 identified by match to protein family HMM TIGR02778; DNA polymerase LigD polymerase subunit 6368289 ligD 4535759 ligD Mycobacterium smegmatis str. MC2 155 DNA polymerase LigD polymerase subunit YP_890519.1 6367237 R 246196 CDS YP_890520.1 118473942 4533888 complement(6368286..6369332) 1 NC_008596.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth; ATP-dependent DNA ligase 6369332 ligC 4533888 ligC Mycobacterium smegmatis str. MC2 155 ATP-dependent DNA ligase YP_890520.1 6368286 R 246196 CDS YP_890521.1 118472839 4537064 6369392..6370456 1 NC_008596.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth; ATP-dependent DNA ligase 6370456 ligC 4537064 ligC Mycobacterium smegmatis str. MC2 155 ATP-dependent DNA ligase YP_890521.1 6369392 D 246196 CDS YP_890522.1 118473522 4533622 complement(6370453..6371685) 1 NC_008596.1 identified by match to protein family HMM PF00135; para-nitrobenzyl esterase 6371685 4533622 MSMEG_6303 Mycobacterium smegmatis str. MC2 155 para-nitrobenzyl esterase YP_890522.1 6370453 R 246196 CDS YP_890523.1 118470201 4532495 6371770..6372138 1 NC_008596.1 hypothetical protein 6372138 4532495 MSMEG_6305 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890523.1 6371770 D 246196 CDS YP_890524.1 118469310 4533375 6372152..6373030 1 NC_008596.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 6373030 gltX 4533375 gltX Mycobacterium smegmatis str. MC2 155 glutamyl-Q tRNA(Asp) synthetase YP_890524.1 6372152 D 246196 CDS YP_890525.1 118470254 4537145 6373123..6374550 1 NC_008596.1 identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726; glutamine-binding periplasmic protein/glutamine transporter permease 6374550 4537145 MSMEG_6307 Mycobacterium smegmatis str. MC2 155 glutamine-binding periplasmic protein/glutamine transporter permease YP_890525.1 6373123 D 246196 CDS YP_890526.1 118469297 4532636 6374547..6375320 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 6375320 4532636 MSMEG_6309 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_890526.1 6374547 D 246196 CDS YP_890527.1 118472740 4532369 complement(6375317..6375430) 1 NC_008596.1 hypothetical protein 6375430 4532369 MSMEG_6308 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890527.1 6375317 R 246196 CDS YP_890528.1 118467991 4531311 complement(6375427..6376752) 1 NC_008596.1 identified by match to protein family HMM PF02550; 4-hydroxybutyrate CoA-transferase 6376752 4531311 MSMEG_6310 Mycobacterium smegmatis str. MC2 155 4-hydroxybutyrate CoA-transferase YP_890528.1 6375427 R 246196 CDS YP_890529.1 118473257 4537318 complement(6376779..6377996) 1 NC_008596.1 identified by match to protein family HMM PF03435; saccharopine dehydrogenase 6377996 lys1 4537318 lys1 Mycobacterium smegmatis str. MC2 155 saccharopine dehydrogenase YP_890529.1 6376779 R 246196 CDS YP_890530.1 118468435 4535593 complement(6378073..6379317) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 6379317 4535593 MSMEG_6312 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_890530.1 6378073 R 246196 CDS YP_890531.1 118468151 4532694 complement(6379351..6380595) 1 NC_008596.1 identified by match to protein family HMM PF01702; match to protein family HMM TIGR00430; match to protein family HMM TIGR00449; queuine tRNA-ribosyltransferase 6380595 tgt 4532694 tgt Mycobacterium smegmatis str. MC2 155 queuine tRNA-ribosyltransferase YP_890531.1 6379351 R 246196 CDS YP_890532.1 118470405 4534178 6380664..6381155 1 NC_008596.1 identified by match to protein family HMM PF05481; lipoprotein LpqH 6381155 4534178 MSMEG_6315 Mycobacterium smegmatis str. MC2 155 lipoprotein LpqH YP_890532.1 6380664 D 246196 CDS YP_890533.1 118473639 4533507 complement(6381142..6382050) 1 NC_008596.1 identified by match to protein family HMM PF00561; haloalkane dehalogenase 6382050 4533507 MSMEG_6314 Mycobacterium smegmatis str. MC2 155 haloalkane dehalogenase YP_890533.1 6381142 R 246196 CDS YP_890534.1 118472686 4532951 6382186..6382716 1 NC_008596.1 identified by match to protein family HMM PF05481; lipoprotein LpqH 6382716 4532951 MSMEG_6316 Mycobacterium smegmatis str. MC2 155 lipoprotein LpqH YP_890534.1 6382186 D 246196 CDS YP_890535.1 118468600 4532379 6382820..6383470 1 NC_008596.1 identified by match to protein family HMM PF00657; lipolytic protein G-D-S-L 6383470 4532379 MSMEG_6317 Mycobacterium smegmatis str. MC2 155 lipolytic protein G-D-S-L YP_890535.1 6382820 D 246196 CDS YP_890536.1 118470055 4534600 6383481..6385259 1 NC_008596.1 identified by match to protein family HMM PF00905; match to protein family HMM PF05223; penicillin-binding protein, transpeptidase 6385259 4534600 MSMEG_6319 Mycobacterium smegmatis str. MC2 155 penicillin-binding protein, transpeptidase YP_890536.1 6383481 D 246196 CDS YP_890537.1 118473492 4532125 complement(6385224..6386960) 1 NC_008596.1 diol dehydratase reactivation protein 6386960 4532125 MSMEG_6318 Mycobacterium smegmatis str. MC2 155 diol dehydratase reactivation protein YP_890537.1 6385224 R 246196 CDS YP_890538.1 118469461 4535724 complement(6386957..6387301) 1 NC_008596.1 diol dehydrase subunit gamma 6387301 4535724 MSMEG_6320 Mycobacterium smegmatis str. MC2 155 diol dehydrase subunit gamma YP_890538.1 6386957 R 246196 CDS YP_890539.1 118472557 4534141 complement(6387298..6389571) 1 NC_008596.1 identified by match to protein family HMM PF02286; glycerol dehydratase large subunit 6389571 4534141 MSMEG_6321 Mycobacterium smegmatis str. MC2 155 glycerol dehydratase large subunit YP_890539.1 6387298 R 246196 CDS YP_890540.1 118472090 4537099 complement(6389612..6390985) 1 NC_008596.1 identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946; bifunctional wax ester synthase/acyl-CoA diacylglycerol acyltransferase 6390985 4537099 MSMEG_6322 Mycobacterium smegmatis str. MC2 155 bifunctional wax ester synthase/acyl-CoA diacylglycerol acyltransferase YP_890540.1 6389612 R 246196 CDS YP_890541.1 118469680 4536813 6391100..6391510 1 NC_008596.1 hypothetical protein 6391510 4536813 MSMEG_6323 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890541.1 6391100 D 246196 CDS YP_890542.1 118471163 4530953 6391470..6393257 1 NC_008596.1 identified by match to protein family HMM PF03098; peroxidase 6393257 4530953 MSMEG_6324 Mycobacterium smegmatis str. MC2 155 peroxidase YP_890542.1 6391470 D 246196 CDS YP_890543.1 118471185 4534971 6393250..6393789 1 NC_008596.1 identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026; hypothetical protein 6393789 4534971 MSMEG_6325 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890543.1 6393250 D 246196 CDS YP_890544.1 118468323 4533802 complement(6394144..6394593) 1 NC_008596.1 identified by match to protein family HMM PF00383; cytidine and deoxycytidylate deaminase 6394593 4533802 MSMEG_6327 Mycobacterium smegmatis str. MC2 155 cytidine and deoxycytidylate deaminase YP_890544.1 6394144 R 246196 CDS YP_890545.1 118468314 4533793 complement(6394590..6395096) 1 NC_008596.1 hypothetical protein 6395096 4533793 MSMEG_6328 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890545.1 6394590 R 246196 CDS YP_890546.1 118469606 4531578 6395196..6396140 1 NC_008596.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase 6396140 4531578 MSMEG_6330 Mycobacterium smegmatis str. MC2 155 prephenate dehydrogenase YP_890546.1 6395196 D 246196 CDS YP_890547.1 118472131 4532174 complement(6396103..6396618) 1 NC_008596.1 identified by match to protein family HMM PF06475; hypothetical protein 6396618 4532174 MSMEG_6329 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890547.1 6396103 R 246196 CDS YP_890548.1 118473767 4537743 complement(6396702..6397508) 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 6397508 4537743 MSMEG_6331 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_890548.1 6396702 R 246196 CDS YP_890549.1 118472530 4534729 complement(6397505..6398149) 1 NC_008596.1 identified by match to protein family HMM PF00528; amino acid ABC transporter permease 6398149 4534729 MSMEG_6332 Mycobacterium smegmatis str. MC2 155 amino acid ABC transporter permease YP_890549.1 6397505 R 246196 CDS YP_890550.1 118468611 4532391 complement(6398149..6399255) 1 NC_008596.1 identified by match to protein family HMM PF00005; amino acid ABC transporter ATP-binding protein 6399255 4532391 MSMEG_6333 Mycobacterium smegmatis str. MC2 155 amino acid ABC transporter ATP-binding protein YP_890550.1 6398149 R 246196 CDS YP_890551.1 118470013 4532751 complement(6399266..6399955) 1 NC_008596.1 identified by match to protein family HMM PF04069; ABC transporter substrate-binding protein 6399955 4532751 MSMEG_6334 Mycobacterium smegmatis str. MC2 155 ABC transporter substrate-binding protein YP_890551.1 6399266 R 246196 CDS YP_890552.1 118472087 4537096 6399944..6400210 1 NC_008596.1 hypothetical protein 6400210 4537096 MSMEG_6335 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890552.1 6399944 D 246196 CDS YP_890553.1 118471520 4537231 6400335..6400700 1 NC_008596.1 hypothetical protein 6400700 4537231 MSMEG_6336 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890553.1 6400335 D 246196 CDS YP_890554.1 118472965 4532304 complement(6400727..6401740) 1 NC_008596.1 identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein 6401740 4532304 MSMEG_6337 Mycobacterium smegmatis str. MC2 155 phosphotransferase enzyme family protein YP_890554.1 6400727 R 246196 CDS YP_890555.1 118468389 4534778 complement(6401750..6402358) 1 NC_008596.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase 6402358 4534778 MSMEG_6338 Mycobacterium smegmatis str. MC2 155 phosphoglycerate mutase YP_890555.1 6401750 R 246196 CDS YP_890556.1 118468569 4533704 6402432..6403187 1 NC_008596.1 identified by match to protein family HMM PF00106; short-chain dehydrogenase/reductase SDR 6403187 4533704 MSMEG_6340 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase SDR YP_890556.1 6402432 D 246196 CDS YP_890557.1 118472871 4531355 complement(6403184..6405064) 1 NC_008596.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase 6405064 4531355 MSMEG_6339 Mycobacterium smegmatis str. MC2 155 metallo-beta-lactamase YP_890557.1 6403184 R 246196 CDS YP_890558.1 118473358 4530834 complement(6405078..6405956) 1 NC_008596.1 identified by match to protein family HMM PF01210; match to protein family HMM PF03446; match to protein family HMM PF03807; 6-phosphogluconate dehydrogenase 6405956 4530834 MSMEG_6341 Mycobacterium smegmatis str. MC2 155 6-phosphogluconate dehydrogenase YP_890558.1 6405078 R 246196 CDS YP_890559.1 118471588 4536539 complement(6405953..6406825) 1 NC_008596.1 identified by match to protein family HMM PF03446; match to protein family HMM PF03807; oxidoreductase 6406825 4536539 MSMEG_6342 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_890559.1 6405953 R 246196 CDS YP_890560.1 118470614 4532972 6406923..6407252 1 NC_008596.1 identified by match to protein family HMM PF01638; transcriptional regulator 6407252 4532972 MSMEG_6344 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_890560.1 6406923 D 246196 CDS YP_890561.1 118468693 4534683 complement(6407249..6407746) 1 NC_008596.1 identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040; hypothetical protein 6407746 4534683 MSMEG_6343 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890561.1 6407249 R 246196 CDS YP_890562.1 118472863 4531347 6407908..6408258 1 NC_008596.1 hypothetical protein 6408258 4531347 MSMEG_6345 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890562.1 6407908 D 246196 CDS YP_890563.1 118468176 4535048 6408351..6408779 1 NC_008596.1 hypothetical protein 6408779 4535048 MSMEG_6346 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890563.1 6408351 D 246196 CDS YP_890564.1 118473545 4532415 6408748..6409584 1 NC_008596.1 hypothetical protein 6409584 4532415 MSMEG_6347 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890564.1 6408748 D 246196 CDS YP_890565.1 118469895 4533214 6409714..6410292 1 NC_008596.1 hypothetical protein 6410292 4533214 MSMEG_6348 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890565.1 6409714 D 246196 CDS YP_890566.1 118468135 4535223 6410654..6411739 1 NC_008596.1 identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141; aminotransferase 6411739 hisC 4535223 hisC Mycobacterium smegmatis str. MC2 155 aminotransferase YP_890566.1 6410654 D 246196 CDS YP_890567.1 118473211 4531061 6411736..6412209 1 NC_008596.1 hypothetical protein 6412209 4531061 MSMEG_6352 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890567.1 6411736 D 246196 CDS YP_890568.1 118468268 4534001 6412212..6413027 1 NC_008596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 6413027 4534001 MSMEG_6353 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_890568.1 6412212 D 246196 CDS YP_890569.1 118472063 4536703 6413230..6413949 1 NC_008596.1 identified by match to protein family HMM PF01083; serine esterase, cutinase 6413949 4536703 MSMEG_6354 Mycobacterium smegmatis str. MC2 155 serine esterase, cutinase YP_890569.1 6413230 D 246196 CDS YP_890570.1 118472783 4533126 6414246..6414500 1 NC_008596.1 hypothetical protein 6414500 4533126 MSMEG_6355 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890570.1 6414246 D 246196 CDS YP_890571.1 118473934 4537372 complement(6414574..6415206) 1 NC_008596.1 identified by match to protein family HMM PF00165; AraC family transcriptional regulator 6415206 4537372 MSMEG_6356 Mycobacterium smegmatis str. MC2 155 AraC family transcriptional regulator YP_890571.1 6414574 R 246196 CDS YP_890572.1 118473460 4534904 complement(6415525..6415662) 1 NC_008596.1 hypothetical protein 6415662 4534904 MSMEG_6357 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890572.1 6415525 R 246196 CDS YP_890573.1 118467854 4532876 6415683..6416591 1 NC_008596.1 mesocentin 6416591 4532876 MSMEG_6358 Mycobacterium smegmatis str. MC2 155 mesocentin YP_890573.1 6415683 D 246196 CDS YP_890574.1 118468232 4537417 6416588..6417490 1 NC_008596.1 identified by match to protein family HMM PF00089; trypsin domain-containing protein 6417490 4537417 MSMEG_6359 Mycobacterium smegmatis str. MC2 155 trypsin domain-containing protein YP_890574.1 6416588 D 246196 CDS YP_890575.1 118470540 4532994 complement(6417795..6418307) 1 NC_008596.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 6418307 4532994 MSMEG_6361 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_890575.1 6417795 R 246196 CDS YP_890576.1 118470180 4530815 6418375..6419352 1 NC_008596.1 identified by match to protein family HMM PF00107; match to protein family HMM TIGR02824; quinone oxidoreductase 6419352 4530815 MSMEG_6362 Mycobacterium smegmatis str. MC2 155 quinone oxidoreductase YP_890576.1 6418375 D 246196 CDS YP_890577.1 118467595 4531411 complement(6419371..6420567) 1 NC_008596.1 identified by match to protein family HMM PF00266; match to protein family HMM TIGR01976; cysteine desulfurase 6420567 4531411 MSMEG_6363 Mycobacterium smegmatis str. MC2 155 cysteine desulfurase YP_890577.1 6419371 R 246196 CDS YP_890578.1 118472424 4532041 6421207..6421734 1 NC_008596.1 hypothetical protein 6421734 4532041 MSMEG_6365 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890578.1 6421207 D 246196 CDS YP_890579.1 118469509 4533337 6421742..6422551 1 NC_008596.1 identified by match to protein family HMM PF00005; O-antigen export system, ATP-binding protein 6422551 4533337 MSMEG_6366 Mycobacterium smegmatis str. MC2 155 O-antigen export system, ATP-binding protein YP_890579.1 6421742 D 246196 CDS YP_890580.1 118467506 4537393 6422538..6423446 1 NC_008596.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 6423446 4537393 MSMEG_6367 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_890580.1 6422538 D 246196 CDS YP_890581.1 118474009 4530969 6423443..6424273 1 NC_008596.1 identified by match to protein family HMM PF01061; O-antigen export system, permease 6424273 4530969 MSMEG_6369 Mycobacterium smegmatis str. MC2 155 O-antigen export system, permease YP_890581.1 6423443 D 246196 CDS YP_890582.1 118473751 4537357 complement(6424261..6424665) 1 NC_008596.1 DNA-binding protein 6424665 4537357 MSMEG_6368 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_890582.1 6424261 R 246196 CDS YP_890583.1 118471311 4534651 complement(6424775..6425236) 1 NC_008596.1 identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; 4-carboxymuconolactone decarboxylase 6425236 pcaC 4534651 pcaC Mycobacterium smegmatis str. MC2 155 4-carboxymuconolactone decarboxylase YP_890583.1 6424775 R 246196 CDS YP_890584.1 118472047 4535393 6425285..6426694 1 NC_008596.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator 6426694 4535393 MSMEG_6371 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_890584.1 6425285 D 246196 CDS YP_890585.1 118472347 4531598 6426713..6427120 1 NC_008596.1 identified by match to protein family HMM PF04138; membrane protein 6427120 4531598 MSMEG_6372 Mycobacterium smegmatis str. MC2 155 membrane protein YP_890585.1 6426713 D 246196 CDS YP_890586.1 118472471 4533837 complement(6427130..6428068) 1 NC_008596.1 identified by match to protein family HMM PF05853; hypothetical protein 6428068 4533837 MSMEG_6373 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890586.1 6427130 R 246196 CDS YP_890587.1 118469508 4533336 complement(6428080..6429102) 1 NC_008596.1 identified by match to protein family HMM PF02558; match to protein family HMM PF03721; match to protein family HMM TIGR00745; 2-dehydropantoate 2-reductase 6429102 panE 4533336 panE Mycobacterium smegmatis str. MC2 155 2-dehydropantoate 2-reductase YP_890587.1 6428080 R 246196 CDS YP_890588.1 118471876 4536252 complement(6429099..6430376) 1 NC_008596.1 identified by match to protein family HMM PF07690; transporter major facilitator family protein 6430376 4536252 MSMEG_6375 Mycobacterium smegmatis str. MC2 155 transporter major facilitator family protein YP_890588.1 6429099 R 246196 CDS YP_890589.1 118472889 4534032 complement(6430444..6431502) 1 NC_008596.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 6431502 4534032 MSMEG_6376 Mycobacterium smegmatis str. MC2 155 LacI family transcriptional regulator YP_890589.1 6430444 R 246196 CDS YP_890590.1 118471472 4534391 complement(6431538..6431645) 1 NC_008596.1 hypothetical protein 6431645 4534391 MSMEG_6377 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890590.1 6431538 R 246196 CDS YP_890591.1 118472369 4534759 6431722..6432624 1 NC_008596.1 identified by match to protein family HMM PF03758; senescence marker protein-30 6432624 4534759 MSMEG_6378 Mycobacterium smegmatis str. MC2 155 senescence marker protein-30 YP_890591.1 6431722 D 246196 CDS YP_890592.1 118471076 4537519 6432650..6433981 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; transporter major facilitator family protein 6433981 4537519 MSMEG_6379 Mycobacterium smegmatis str. MC2 155 transporter major facilitator family protein YP_890592.1 6432650 D 246196 CDS YP_890593.1 118468641 4533573 complement(6434002..6434412) 1 NC_008596.1 hypothetical protein 6434412 4533573 MSMEG_6380 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890593.1 6434002 R 246196 CDS YP_890594.1 118467794 4535716 complement(6434939..6436762) 1 NC_008596.1 identified by match to protein family HMM PF06259; hypothetical protein 6436762 4535716 MSMEG_6381 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890594.1 6434939 R 246196 CDS YP_890595.1 118470612 4532115 6436944..6438350 1 NC_008596.1 identified by match to protein family HMM PF01565; oxidoreductase, FAD-binding 6438350 4532115 MSMEG_6382 Mycobacterium smegmatis str. MC2 155 oxidoreductase, FAD-binding YP_890595.1 6436944 D 246196 CDS YP_890596.1 118471819 4536312 6438415..6438876 1 NC_008596.1 identified by match to protein family HMM PF01475; transcription regulator FurA 6438876 4536312 MSMEG_6383 Mycobacterium smegmatis str. MC2 155 transcription regulator FurA YP_890596.1 6438415 D 246196 CDS YP_890597.1 118471761 4536370 6438913..6441132 1 NC_008596.1 identified by match to protein family HMM PF00141; match to protein family HMM TIGR00198; catalase/peroxidase HPI 6441132 katG 4536370 katG Mycobacterium smegmatis str. MC2 155 catalase/peroxidase HPI YP_890597.1 6438913 D 246196 CDS YP_890598.1 118469876 4536568 6441262..6442026 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 6442026 4536568 MSMEG_6385 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_890598.1 6441262 D 246196 CDS YP_890599.1 118468784 4535675 6442032..6443906 1 NC_008596.1 membrane protein 6443906 4535675 MSMEG_6386 Mycobacterium smegmatis str. MC2 155 membrane protein YP_890599.1 6442032 D 246196 CDS YP_890600.1 118470192 4530827 6443929..6447153 1 NC_008596.1 identified by match to protein family HMM PF04602; arabinosyltransferase A 6447153 4530827 MSMEG_6387 Mycobacterium smegmatis str. MC2 155 arabinosyltransferase A YP_890600.1 6443929 D 246196 CDS YP_890601.1 118468951 4532614 6447287..6450529 1 NC_008596.1 identified by match to protein family HMM PF04602; arabinosyltransferase B 6450529 4532614 MSMEG_6388 Mycobacterium smegmatis str. MC2 155 arabinosyltransferase B YP_890601.1 6447287 D 246196 CDS YP_890602.1 118470657 4534666 6450526..6453774 1 NC_008596.1 identified by match to protein family HMM PF04602; arabinosyltransferase A 6453774 4534666 MSMEG_6389 Mycobacterium smegmatis str. MC2 155 arabinosyltransferase A YP_890602.1 6450526 D 246196 CDS YP_890603.1 118473283 4535545 6453932..6455158 1 NC_008596.1 identified by match to protein family HMM PF05977; match to protein family HMM PF07690; transporter major facilitator family protein 6455158 4535545 MSMEG_6390 Mycobacterium smegmatis str. MC2 155 transporter major facilitator family protein YP_890603.1 6453932 D 246196 CDS YP_890604.1 118471103 4535868 complement(6455190..6456743) 1 NC_008596.1 identified by match to protein family HMM PF01039; propionyl-CoA carboxylase subunit beta 6456743 4535868 MSMEG_6391 Mycobacterium smegmatis str. MC2 155 propionyl-CoA carboxylase subunit beta YP_890604.1 6455190 R 246196 CDS YP_890605.1 118469591 4531096 complement(6456740..6462190) 1 NC_008596.1 identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801; polyketide synthase 6462190 4531096 MSMEG_6392 Mycobacterium smegmatis str. MC2 155 polyketide synthase YP_890605.1 6456740 R 246196 CDS YP_890606.1 118471852 4536267 complement(6462325..6464217) 1 NC_008596.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 6464217 4536267 MSMEG_6393 Mycobacterium smegmatis str. MC2 155 long-chain-fatty-acid--CoA ligase YP_890606.1 6462325 R 246196 CDS YP_890607.1 118468144 4532687 complement(6464462..6465475) 1 NC_008596.1 hypothetical protein 6465475 4532687 MSMEG_6394 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890607.1 6464462 R 246196 CDS YP_890608.1 118471669 4536469 complement(6465494..6465967) 1 NC_008596.1 hypothetical protein 6465967 4536469 MSMEG_6395 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890608.1 6465494 R 246196 CDS YP_890609.1 118473502 4532135 complement(6466034..6466936) 1 NC_008596.1 identified by match to protein family HMM PF00756; antigen 85-C 6466936 4532135 MSMEG_6396 Mycobacterium smegmatis str. MC2 155 antigen 85-C YP_890609.1 6466034 R 246196 CDS YP_890610.1 118472803 4536657 complement(6466940..6467110) 1 NC_008596.1 hypothetical protein 6467110 4536657 MSMEG_6397 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890610.1 6466940 R 246196 CDS YP_890611.1 118468744 4534272 complement(6467091..6468098) 1 NC_008596.1 identified by match to protein family HMM PF00756; antigen 85-A 6468098 4534272 MSMEG_6398 Mycobacterium smegmatis str. MC2 155 antigen 85-A YP_890611.1 6467091 R 246196 CDS YP_890612.1 118467561 4535515 complement(6468235..6469248) 1 NC_008596.1 identified by match to protein family HMM PF00756; antigen 85-C 6469248 4535515 MSMEG_6399 Mycobacterium smegmatis str. MC2 155 antigen 85-C YP_890612.1 6468235 R 246196 CDS YP_890613.1 118473488 4532121 complement(6469392..6471329) 1 NC_008596.1 transmembrane protein 6471329 4532121 MSMEG_6400 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_890613.1 6469392 R 246196 CDS YP_890614.1 118472779 4531870 complement(6471409..6472365) 1 NC_008596.1 catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate; phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase 6472365 4531870 MSMEG_6401 Mycobacterium smegmatis str. MC2 155 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase YP_890614.1 6471409 R 246196 CDS YP_890615.1 118469004 4536054 complement(6472402..6472944) 1 NC_008596.1 identified by match to protein family HMM PF01569; PAP2 superfamily protein 6472944 4536054 MSMEG_6402 Mycobacterium smegmatis str. MC2 155 PAP2 superfamily protein YP_890615.1 6472402 R 246196 CDS YP_890616.1 118470244 4536763 complement(6472941..6474881) 1 NC_008596.1 bifunctional udp-galactofuranosyl transferase glft 6474881 4536763 MSMEG_6403 Mycobacterium smegmatis str. MC2 155 bifunctional udp-galactofuranosyl transferase glft YP_890616.1 6472941 R 246196 CDS YP_890617.1 118470965 4534537 complement(6474878..6476116) 1 NC_008596.1 identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031; UDP-galactopyranose mutase 6476116 glf 4534537 glf Mycobacterium smegmatis str. MC2 155 UDP-galactopyranose mutase YP_890617.1 6474878 R 246196 CDS YP_890618.1 118471953 4536177 6476344..6477261 1 NC_008596.1 Erp protein 6477261 4536177 MSMEG_6405 Mycobacterium smegmatis str. MC2 155 Erp protein YP_890618.1 6476344 D 246196 CDS YP_890619.1 118473230 4536917 6477408..6479018 1 NC_008596.1 identified by match to protein family HMM PF01510; N-acetylmuramoyl-L-alanine amidase 6479018 4536917 MSMEG_6406 Mycobacterium smegmatis str. MC2 155 N-acetylmuramoyl-L-alanine amidase YP_890619.1 6477408 D 246196 CDS YP_890620.1 118467819 4534570 complement(6479076..6479900) 1 NC_008596.1 identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; cof family hydrolase 6479900 4534570 MSMEG_6407 Mycobacterium smegmatis str. MC2 155 cof family hydrolase YP_890620.1 6479076 R 246196 CDS YP_890621.1 118470489 4537173 complement(6479897..6480658) 1 NC_008596.1 identified by match to protein family HMM PF01553; acyltransferase 6480658 4537173 MSMEG_6408 Mycobacterium smegmatis str. MC2 155 acyltransferase YP_890621.1 6479897 R 246196 CDS YP_890622.1 118473092 4531153 complement(6480665..6481456) 1 NC_008596.1 identified by match to protein family HMM PF01553; acyltransferase 6481456 4531153 MSMEG_6409 Mycobacterium smegmatis str. MC2 155 acyltransferase YP_890622.1 6480665 R 246196 CDS YP_890623.1 118474008 4530968 6481598..6483154 1 NC_008596.1 identified by match to protein family HMM PF00355; Rieske 2Fe-2S family protein 6483154 4530968 MSMEG_6410 Mycobacterium smegmatis str. MC2 155 Rieske 2Fe-2S family protein YP_890623.1 6481598 D 246196 CDS YP_890624.1 118468781 4535672 6483151..6483483 1 NC_008596.1 hypothetical protein 6483483 4535672 MSMEG_6411 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890624.1 6483151 D 246196 CDS YP_890625.1 118470309 4533368 complement(6483487..6484305) 1 NC_008596.1 hypothetical protein 6484305 4533368 MSMEG_6412 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890625.1 6483487 R 246196 CDS YP_890626.1 118469581 4531455 complement(6484302..6485555) 1 NC_008596.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 6485555 serS 4531455 serS Mycobacterium smegmatis str. MC2 155 seryl-tRNA synthetase YP_890626.1 6484302 R 246196 CDS YP_890627.1 118471034 4536736 6485712..6487163 1 NC_008596.1 hypothetical protein 6487163 4536736 MSMEG_6414 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890627.1 6485712 D 246196 CDS YP_890628.1 118473361 4530837 6487173..6487517 1 NC_008596.1 identified by match to protein family HMM PF06262; hypothetical protein 6487517 4530837 MSMEG_6415 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890628.1 6487173 D 246196 CDS YP_890629.1 118471882 4536258 6487586..6487774 1 NC_008596.1 hypothetical protein 6487774 4536258 MSMEG_6417 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890629.1 6487586 D 246196 CDS YP_890630.1 118471046 4536748 complement(6487771..6488457) 1 NC_008596.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase 6488457 4536748 MSMEG_6416 Mycobacterium smegmatis str. MC2 155 phosphoglycerate mutase YP_890630.1 6487771 R 246196 CDS YP_890631.1 118470448 4534511 complement(6488454..6489386) 1 NC_008596.1 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase 6489386 4534511 MSMEG_6418 Mycobacterium smegmatis str. MC2 155 prephenate dehydratase YP_890631.1 6488454 R 246196 CDS YP_890632.1 118469515 4536718 6489515..6490300 1 NC_008596.1 hypothetical protein 6490300 4536718 MSMEG_6419 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890632.1 6489515 D 246196 CDS YP_890633.1 118473325 4530984 6490338..6491120 1 NC_008596.1 identified by match to protein family HMM PF02517; abortive infection protein 6491120 4530984 MSMEG_6420 Mycobacterium smegmatis str. MC2 155 abortive infection protein YP_890633.1 6490338 D 246196 CDS YP_890634.1 118472414 4531336 6490613..6492484 1 NC_008596.1 identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; transcriptional regulator 6492484 4531336 MSMEG_6421 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_890634.1 6490613 D 246196 CDS YP_890635.1 118468959 4532622 6492624..6493169 1 NC_008596.1 identified by match to protein family HMM PF00210; ferritin family protein 6493169 4532622 MSMEG_6422 Mycobacterium smegmatis str. MC2 155 ferritin family protein YP_890635.1 6492624 D 246196 CDS YP_890636.1 118472028 4534108 complement(6493183..6494028) 1 NC_008596.1 identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase 6494028 4534108 MSMEG_6423 Mycobacterium smegmatis str. MC2 155 glycerophosphoryl diester phosphodiesterase YP_890636.1 6493183 R 246196 CDS YP_890637.1 118469079 4537634 complement(6494033..6495190) 1 NC_008596.1 transmembrane protein 6495190 4537634 MSMEG_6424 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_890637.1 6494033 R 246196 CDS YP_890638.1 118473921 4537359 complement(6495219..6495560) 1 NC_008596.1 identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein 6495560 4537359 MSMEG_6425 Mycobacterium smegmatis str. MC2 155 rhodanese-like domain-containing protein YP_890638.1 6495219 R 246196 CDS YP_890639.1 118467525 4535536 6496047..6496190 1 NC_008596.1 hypothetical protein 6496190 4535536 MSMEG_6426 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890639.1 6496047 D 246196 CDS YP_890640.1 118469767 4532831 6496331..6496954 1 NC_008596.1 identified by match to protein family HMM PF00081; match to protein family HMM PF02777; [Mn] superoxide dismutase 6496954 4532831 MSMEG_6427 Mycobacterium smegmatis str. MC2 155 [Mn] superoxide dismutase YP_890640.1 6496331 D 246196 CDS YP_890641.1 118469467 4535730 6497167..6497700 1 NC_008596.1 hypothetical protein 6497700 4535730 MSMEG_6428 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890641.1 6497167 D 246196 CDS YP_890642.1 118474047 4531728 complement(6497733..6497888) 1 NC_008596.1 hypothetical protein 6497888 4531728 MSMEG_6429 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890642.1 6497733 R 246196 CDS YP_890643.1 118473525 4533625 complement(6498318..6500012) 1 NC_008596.1 hypothetical protein 6500012 4533625 MSMEG_6430 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890643.1 6498318 R 246196 CDS YP_890644.1 118473945 4533891 6498402..6498830 1 NC_008596.1 hypothetical protein 6498830 4533891 MSMEG_6431 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890644.1 6498402 D 246196 CDS YP_890645.1 118467993 4531313 complement(6500009..6500470) 1 NC_008596.1 hypothetical protein 6500470 4531313 MSMEG_6432 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890645.1 6500009 R 246196 CDS YP_890646.1 118467663 4536929 complement(6500573..6501679) 1 NC_008596.1 hypothetical protein 6501679 4536929 MSMEG_6433 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890646.1 6500573 R 246196 CDS YP_890647.1 118473461 4534905 6501891..6502547 1 NC_008596.1 hypothetical protein 6502547 4534905 MSMEG_6434 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890647.1 6501891 D 246196 CDS YP_890648.1 118467982 4535164 6502555..6503088 1 NC_008596.1 hypothetical protein 6503088 4535164 MSMEG_6435 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890648.1 6502555 D 246196 CDS YP_890649.1 118469088 4537644 6503125..6503676 1 NC_008596.1 identified by match to protein family HMM PF04234; copper resistance protein CopC 6503676 4537644 MSMEG_6436 Mycobacterium smegmatis str. MC2 155 copper resistance protein CopC YP_890649.1 6503125 D 246196 CDS YP_890650.1 118470216 4533907 6503688..6504617 1 NC_008596.1 identified by match to protein family HMM PF05425; copper resistance protein D 6504617 4533907 MSMEG_6437 Mycobacterium smegmatis str. MC2 155 copper resistance protein D YP_890650.1 6503688 D 246196 CDS YP_890651.1 118471250 4531526 6504708..6505196 1 NC_008596.1 hypothetical protein 6505196 4531526 MSMEG_6438 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890651.1 6504708 D 246196 CDS YP_890652.1 118469646 4535056 6505226..6505705 1 NC_008596.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 6505705 4535056 MSMEG_6439 Mycobacterium smegmatis str. MC2 155 ribonuclease activity regulator protein RraA YP_890652.1 6505226 D 246196 CDS YP_890653.1 118473765 4537741 complement(6505769..6507247) 1 NC_008596.1 monooxygenase, flavin-binding family protein 6507247 4537741 MSMEG_6440 Mycobacterium smegmatis str. MC2 155 monooxygenase, flavin-binding family protein YP_890653.1 6505769 R 246196 CDS YP_890654.1 118468283 4535770 6507325..6507978 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 6507978 4535770 MSMEG_6441 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890654.1 6507325 D 246196 CDS YP_890655.1 118472591 4534372 6508015..6509226 1 NC_008596.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 6509226 dinP 4534372 dinP Mycobacterium smegmatis str. MC2 155 DNA polymerase IV YP_890655.1 6508015 D 246196 CDS YP_890656.1 118471210 4533812 complement(6509223..6509585) 1 NC_008596.1 integral membrane protein 6509585 4533812 MSMEG_6442 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_890656.1 6509223 R 246196 CDS YP_890657.1 118468247 4537432 6509624..6509908 1 NC_008596.1 hypothetical protein 6509908 4537432 MSMEG_6444 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890657.1 6509624 D 246196 CDS YP_890658.1 118470220 4533911 complement(6509909..6510913) 1 NC_008596.1 identified by match to protein family HMM PF02811; hypothetical protein 6510913 4533911 MSMEG_6445 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890658.1 6509909 R 246196 CDS YP_890659.1 118471675 4536476 6511011..6512072 1 NC_008596.1 hypothetical protein 6512072 4536476 MSMEG_6446 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890659.1 6511011 D 246196 CDS YP_890660.1 118470718 4533933 6512085..6512408 1 NC_008596.1 hypothetical protein 6512408 4533933 MSMEG_6447 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890660.1 6512085 D 246196 CDS YP_890661.1 118472678 4532943 complement(6512567..6512938) 1 NC_008596.1 hypothetical protein 6512938 4532943 MSMEG_6448 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890661.1 6512567 R 246196 CDS YP_890662.1 118470777 4531141 6512612..6512932 1 NC_008596.1 hypothetical protein 6512932 4531141 MSMEG_6449 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890662.1 6512612 D 246196 CDS YP_890663.1 118468678 4535901 6512987..6514384 1 NC_008596.1 hypothetical protein 6514384 4535901 MSMEG_6450 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890663.1 6512987 D 246196 CDS YP_890664.1 118468111 4535609 6514667..6515059 1 NC_008596.1 identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 6515059 4535609 MSMEG_6451 Mycobacterium smegmatis str. MC2 155 ArsR family transcriptional regulator YP_890664.1 6514667 D 246196 CDS YP_890665.1 118467691 4537329 6515062..6516696 1 NC_008596.1 identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740; sulfate permease 6516696 4537329 MSMEG_6453 Mycobacterium smegmatis str. MC2 155 sulfate permease YP_890665.1 6515062 D 246196 CDS YP_890666.1 118473695 4533243 complement(6516693..6518045) 1 NC_008596.1 identified by match to protein family HMM PF00171; [NADP+] succinate-semialdehyde dehydrogenase 6518045 4533243 MSMEG_6452 Mycobacterium smegmatis str. MC2 155 [NADP+] succinate-semialdehyde dehydrogenase YP_890666.1 6516693 R 246196 CDS YP_890667.1 118470586 4531373 6518199..6519053 1 NC_008596.1 identified by match to protein family HMM PF00296; hypothetical protein 6519053 4531373 MSMEG_6454 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890667.1 6518199 D 246196 CDS YP_890668.1 118467933 4533412 complement(6519063..6519647) 1 NC_008596.1 hypothetical protein 6519647 4533412 MSMEG_6455 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890668.1 6519063 R 246196 CDS YP_890669.1 118470818 4531929 complement(6519757..6519897) 1 NC_008596.1 hypothetical protein 6519897 4531929 MSMEG_6456 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890669.1 6519757 R 246196 CDS YP_890670.1 118471572 4534434 6520166..6520669 1 NC_008596.1 identified by match to protein family HMM PF00174; oxidoreductase molybdopterin binding subunit 6520669 4534434 MSMEG_6457 Mycobacterium smegmatis str. MC2 155 oxidoreductase molybdopterin binding subunit YP_890670.1 6520166 D 246196 CDS YP_890671.1 118473425 4537412 complement(6520673..6522139) 1 NC_008596.1 glutamate synthase is composed of subunits alpha and beta; subunit beta is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the subunit alpha, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 6522139 gltD 4537412 gltD Mycobacterium smegmatis str. MC2 155 glutamate synthase subunit beta YP_890671.1 6520673 R 246196 CDS YP_890672.1 118468060 4534175 complement(6522132..6526760) 1 NC_008596.1 identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898; ferredoxin-dependent glutamate synthase 1 6526760 4534175 MSMEG_6459 Mycobacterium smegmatis str. MC2 155 ferredoxin-dependent glutamate synthase 1 YP_890672.1 6522132 R 246196 CDS YP_890673.1 118471719 4536405 6526677..6526865 1 NC_008596.1 hypothetical protein 6526865 4536405 MSMEG_6460 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890673.1 6526677 D 246196 CDS YP_890674.1 118471516 4537227 complement(6526946..6527449) 1 NC_008596.1 hypothetical protein 6527449 4537227 MSMEG_6461 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890674.1 6526946 R 246196 CDS YP_890675.1 118471336 4534849 6527168..6528490 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 6528490 4534849 MSMEG_6462 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_890675.1 6527168 D 246196 CDS YP_890676.1 118469228 4535364 complement(6528498..6529199) 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 6529199 4535364 MSMEG_6463 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_890676.1 6528498 R 246196 CDS YP_890677.1 118469945 4530908 6529689..6530489 1 NC_008596.1 identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; hypothetical protein 6530489 4530908 MSMEG_6464 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890677.1 6529689 D 246196 CDS YP_890678.1 118468313 4533792 6530521..6531897 1 NC_008596.1 identified by match to protein family HMM PF00654; chloride channel 6531897 4533792 MSMEG_6465 Mycobacterium smegmatis str. MC2 155 chloride channel YP_890678.1 6530521 D 246196 CDS YP_890679.1 118467817 4534568 6532006..6532779 1 NC_008596.1 identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; aquaporin Z 6532779 4534568 MSMEG_6466 Mycobacterium smegmatis str. MC2 155 aquaporin Z YP_890679.1 6532006 D 246196 CDS YP_890680.1 118473252 4537312 complement(6532853..6533404) 1 NC_008596.1 identified by match to protein family HMM PF00210; starvation-induced DNA protecting protein 6533404 4537312 MSMEG_6467 Mycobacterium smegmatis str. MC2 155 starvation-induced DNA protecting protein YP_890680.1 6532853 R 246196 CDS YP_890681.1 118471731 4536417 complement(6533466..6534350) 1 NC_008596.1 hypothetical protein 6534350 4536417 MSMEG_6468 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890681.1 6533466 R 246196 CDS YP_890682.1 118471107 4535873 complement(6534409..6534834) 1 NC_008596.1 identified by match to protein family HMM PF04248; hypothetical protein 6534834 4535873 MSMEG_6469 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890682.1 6534409 R 246196 CDS YP_890683.1 118469813 4532839 6535030..6535236 1 NC_008596.1 hypothetical protein 6535236 4532839 MSMEG_6470 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890683.1 6535030 D 246196 CDS YP_890684.1 118468864 4535637 complement(6535287..6536726) 1 NC_008596.1 identified by match to protein family HMM PF01266; glycine/D-amino acid oxidase 6536726 4535637 MSMEG_6471 Mycobacterium smegmatis str. MC2 155 glycine/D-amino acid oxidase YP_890684.1 6535287 R 246196 CDS YP_890685.1 118473930 4537368 6536834..6537058 1 NC_008596.1 hypothetical protein 6537058 4537368 MSMEG_6472 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890685.1 6536834 D 246196 CDS YP_890686.1 118473716 4536950 complement(6537143..6537961) 1 NC_008596.1 identified by match to protein family HMM PF02409; tetracenomycin polyketide synthesis O-methyltransferase TcmP 6537961 4536950 MSMEG_6473 Mycobacterium smegmatis str. MC2 155 tetracenomycin polyketide synthesis O-methyltransferase TcmP YP_890686.1 6537143 R 246196 CDS YP_890687.1 118469109 4535302 complement(6538024..6539046) 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; nucleoside-diphosphate-sugar epimerase 6539046 4535302 MSMEG_6474 Mycobacterium smegmatis str. MC2 155 nucleoside-diphosphate-sugar epimerase YP_890687.1 6538024 R 246196 CDS YP_890688.1 118470028 4531643 complement(6539043..6539543) 1 NC_008596.1 hypothetical protein 6539543 4531643 MSMEG_6475 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890688.1 6539043 R 246196 CDS YP_890689.1 118473745 4537350 complement(6539586..6539978) 1 NC_008596.1 hypothetical protein 6539978 4537350 MSMEG_6476 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890689.1 6539586 R 246196 CDS YP_890690.1 118471012 4534468 6540054..6540569 1 NC_008596.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 6540569 msrA 4534468 msrA Mycobacterium smegmatis str. MC2 155 methionine sulfoxide reductase A YP_890690.1 6540054 D 246196 CDS YP_890691.1 118468097 4536025 complement(6540573..6541916) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 6541916 4536025 MSMEG_6478 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_890691.1 6540573 R 246196 CDS YP_890692.1 118470743 4533295 6542006..6542638 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulatory protein 6542638 4533295 MSMEG_6480 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_890692.1 6542006 D 246196 CDS YP_890693.1 118471670 4536470 complement(6542615..6543184) 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 6543184 4536470 MSMEG_6479 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_890693.1 6542615 R 246196 CDS YP_890694.1 118470638 4532397 6543238..6543909 1 NC_008596.1 hypothetical protein 6543909 4532397 MSMEG_6482 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890694.1 6543238 D 246196 CDS YP_890695.1 118467759 4533390 complement(6543906..6544952) 1 NC_008596.1 hypothetical protein 6544952 4533390 MSMEG_6481 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890695.1 6543906 R 246196 CDS YP_890696.1 118473380 4536625 complement(6544983..6545705) 1 NC_008596.1 methyltransferase type 11 6545705 4536625 MSMEG_6483 Mycobacterium smegmatis str. MC2 155 methyltransferase type 11 YP_890696.1 6544983 R 246196 CDS YP_890697.1 118469783 4535807 complement(6545699..6546940) 1 NC_008596.1 identified by match to protein family HMM PF00534; glycosyl transferase family protein 6546940 4535807 MSMEG_6484 Mycobacterium smegmatis str. MC2 155 glycosyl transferase family protein YP_890697.1 6545699 R 246196 CDS YP_890698.1 118467839 4535466 complement(6547061..6547516) 1 NC_008596.1 identified by match to protein family HMM PF01243; ATP-binding protein 6547516 4535466 MSMEG_6485 Mycobacterium smegmatis str. MC2 155 ATP-binding protein YP_890698.1 6547061 R 246196 CDS YP_890699.1 118468643 4533575 complement(6547545..6548576) 1 NC_008596.1 identified by match to protein family HMM PF00724; FAD/FMN-binding oxidoreductase 6548576 4533575 MSMEG_6486 Mycobacterium smegmatis str. MC2 155 FAD/FMN-binding oxidoreductase YP_890699.1 6547545 R 246196 CDS YP_890700.1 118470716 4533931 complement(6548602..6549669) 1 NC_008596.1 identified by match to protein family HMM PF04909; 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2, 4-dienoate decarboxylase 6549669 4533931 MSMEG_6487 Mycobacterium smegmatis str. MC2 155 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2, 4-dienoate decarboxylase YP_890700.1 6548602 R 246196 CDS YP_890701.1 118469693 4536826 complement(6549677..6550114) 1 NC_008596.1 hypothetical protein 6550114 4536826 MSMEG_6488 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890701.1 6549677 R 246196 CDS YP_890702.1 118471263 4532137 complement(6550150..6551340) 1 NC_008596.1 identified by match to protein family HMM PF01494; hypothetical protein 6551340 4532137 MSMEG_6489 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890702.1 6550150 R 246196 CDS YP_890703.1 118473571 4531005 complement(6551337..6552680) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily protein 6552680 4531005 MSMEG_6490 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein YP_890703.1 6551337 R 246196 CDS YP_890704.1 118468711 4532780 complement(6552753..6554252) 1 NC_008596.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 6554252 4532780 MSMEG_6491 Mycobacterium smegmatis str. MC2 155 aldehyde dehydrogenase YP_890704.1 6552753 R 246196 CDS YP_890705.1 118471678 4536479 6554465..6556201 1 NC_008596.1 identified by match to protein family HMM PF01590; GAF domain-containing protein 6556201 4536479 MSMEG_6492 Mycobacterium smegmatis str. MC2 155 GAF domain-containing protein YP_890705.1 6554465 D 246196 CDS YP_890706.1 118473712 4533260 6556372..6557424 1 NC_008596.1 hypothetical protein 6557424 4533260 MSMEG_6493 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890706.1 6556372 D 246196 CDS YP_890707.1 118470340 4534923 6557421..6558251 1 NC_008596.1 identified by match to protein family HMM PF00528; nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein 6558251 4534923 MSMEG_6494 Mycobacterium smegmatis str. MC2 155 nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein YP_890707.1 6557421 D 246196 CDS YP_890708.1 118467878 4535252 6558248..6559027 1 NC_008596.1 identified by match to protein family HMM PF00528; nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein 6559027 4535252 MSMEG_6495 Mycobacterium smegmatis str. MC2 155 nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein YP_890708.1 6558248 D 246196 CDS YP_890709.1 118469012 4536063 6559046..6559807 1 NC_008596.1 identified by match to protein family HMM PF00005; nitrate/sulfonate/bicarbonate ABC transporter ATPase subunit 6559807 4536063 MSMEG_6496 Mycobacterium smegmatis str. MC2 155 nitrate/sulfonate/bicarbonate ABC transporter ATPase subunit YP_890709.1 6559046 D 246196 CDS YP_890710.1 118471018 4534474 complement(6559895..6560428) 1 NC_008596.1 hypothetical protein 6560428 4534474 MSMEG_6497 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890710.1 6559895 R 246196 CDS YP_890711.1 118473303 4535174 6560543..6560836 1 NC_008596.1 hypothetical protein 6560836 4535174 MSMEG_6498 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890711.1 6560543 D 246196 CDS YP_890712.1 118472521 4534719 6560975..6561772 1 NC_008596.1 identified by match to protein family HMM PF04248; hypothetical protein 6561772 4534719 MSMEG_6499 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890712.1 6560975 D 246196 CDS YP_890713.1 118467863 4532885 6561852..6563714 1 NC_008596.1 hypothetical protein 6563714 4532885 MSMEG_6500 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890713.1 6561852 D 246196 CDS YP_890714.1 118473443 4534134 6563711..6563923 1 NC_008596.1 hypothetical protein 6563923 4534134 MSMEG_6501 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890714.1 6563711 D 246196 CDS YP_890715.1 118468116 4535614 6563920..6564363 1 NC_008596.1 hypothetical protein 6564363 4535614 MSMEG_6502 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890715.1 6563920 D 246196 CDS YP_890716.1 118469357 4533181 6564360..6565652 1 NC_008596.1 hypothetical protein 6565652 4533181 MSMEG_6504 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890716.1 6564360 D 246196 CDS YP_890717.1 118471278 4532152 complement(6565649..6566215) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 6566215 4532152 MSMEG_6503 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890717.1 6565649 R 246196 CDS YP_890718.1 118472045 4535391 6566306..6567010 1 NC_008596.1 identified by match to protein family HMM PF00881; NfnB protein 6567010 4535391 MSMEG_6505 Mycobacterium smegmatis str. MC2 155 NfnB protein YP_890718.1 6566306 D 246196 CDS YP_890719.1 118473919 4536985 6567028..6567579 1 NC_008596.1 identified by match to protein family HMM PF00857; nicotinamidase/pyrazinamidase 6567579 4536985 MSMEG_6506 Mycobacterium smegmatis str. MC2 155 nicotinamidase/pyrazinamidase YP_890719.1 6567028 D 246196 CDS YP_890720.1 118473311 4535183 6567776..6569893 1 NC_008596.1 identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02100; glycogen debranching protein GlgX 6569893 glgX 4535183 glgX Mycobacterium smegmatis str. MC2 155 glycogen debranching protein GlgX YP_890720.1 6567776 D 246196 CDS YP_890721.1 118469576 4531450 6570166..6570633 1 NC_008596.1 identified by match to protein family HMM PF01047; match to protein family HMM PF03965; MarR family transcriptional regulator 6570633 4531450 MSMEG_6508 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_890721.1 6570166 D 246196 CDS YP_890722.1 118468843 4535420 6570630..6571499 1 NC_008596.1 identified by match to protein family HMM PF00005; multidrug ABC transporter ATP-binding protein 6571499 4535420 MSMEG_6509 Mycobacterium smegmatis str. MC2 155 multidrug ABC transporter ATP-binding protein YP_890722.1 6570630 D 246196 CDS YP_890723.1 118468970 4533534 6571489..6572292 1 NC_008596.1 identified by match to protein family HMM PF01061; multidrug ABC transporter 6572292 4533534 MSMEG_6510 Mycobacterium smegmatis str. MC2 155 multidrug ABC transporter YP_890723.1 6571489 D 246196 CDS YP_890724.1 118471929 4536191 6572351..6573508 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 6573508 4536191 MSMEG_6511 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_890724.1 6572351 D 246196 CDS YP_890725.1 118472994 4531286 6573517..6574626 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 6574626 4531286 MSMEG_6512 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_890725.1 6573517 D 246196 CDS YP_890726.1 118468090 4536018 complement(6574647..6576638) 1 NC_008596.1 identified by match to protein family HMM PF07690; membrane transporter 6576638 4536018 MSMEG_6513 Mycobacterium smegmatis str. MC2 155 membrane transporter YP_890726.1 6574647 R 246196 CDS YP_890727.1 118470294 4533352 complement(6576690..6578015) 1 NC_008596.1 trehalose synthase-fused maltokinase 6578015 4533352 MSMEG_6514 Mycobacterium smegmatis str. MC2 155 trehalose synthase-fused maltokinase YP_890727.1 6576690 R 246196 CDS YP_890728.1 118469348 4533171 complement(6578012..6579793) 1 NC_008596.1 identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; trehalose synthase 6579793 treS 4533171 treS Mycobacterium smegmatis str. MC2 155 trehalose synthase YP_890728.1 6578012 R 246196 CDS YP_890729.1 118472254 4531563 6579767..6579907 1 NC_008596.1 hypothetical protein 6579907 4531563 MSMEG_6517 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890729.1 6579767 D 246196 CDS YP_890730.1 118469248 4531540 complement(6579893..6580066) 1 NC_008596.1 hypothetical protein 6580066 4531540 MSMEG_6516 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890730.1 6579893 R 246196 CDS YP_890731.1 118470189 4530824 6580067..6580456 1 NC_008596.1 hypothetical protein 6580456 4530824 MSMEG_6518 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890731.1 6580067 D 246196 CDS YP_890732.1 118472674 4532939 6580577..6581377 1 NC_008596.1 identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 6581377 4532939 MSMEG_6519 Mycobacterium smegmatis str. MC2 155 pyridoxamine 5'-phosphate oxidase YP_890732.1 6580577 D 246196 CDS YP_890733.1 118473594 4534867 6581422..6582000 1 NC_008596.1 identified by match to protein family HMM PF00156; orotate phosphoribosyltransferase 6582000 4534867 MSMEG_6520 Mycobacterium smegmatis str. MC2 155 orotate phosphoribosyltransferase YP_890733.1 6581422 D 246196 CDS YP_890734.1 118468909 4537071 complement(6582005..6583069) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF03459; sulfate/thiosulfate import ATP-binding protein CysA 2 6583069 4537071 MSMEG_6521 Mycobacterium smegmatis str. MC2 155 sulfate/thiosulfate import ATP-binding protein CysA 2 YP_890734.1 6582005 R 246196 CDS YP_890735.1 118469864 4530902 complement(6583066..6583887) 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter inner membrane protein 6583887 4530902 MSMEG_6522 Mycobacterium smegmatis str. MC2 155 ABC transporter inner membrane protein YP_890735.1 6583066 R 246196 CDS YP_890736.1 118468412 4534554 complement(6583884..6584744) 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter 6584744 4534554 MSMEG_6523 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_890736.1 6583884 R 246196 CDS YP_890737.1 118469151 4534737 complement(6584753..6585904) 1 NC_008596.1 polyamine/opine/phosphonate ABC transporter periplasmic ligand-binding protein 6585904 4534737 MSMEG_6524 Mycobacterium smegmatis str. MC2 155 polyamine/opine/phosphonate ABC transporter periplasmic ligand-binding protein YP_890737.1 6584753 R 246196 CDS YP_890738.1 118471388 4534982 6586134..6586640 1 NC_008596.1 hypothetical protein 6586640 4534982 MSMEG_6525 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890738.1 6586134 D 246196 CDS YP_890739.1 118473990 4531434 6586660..6587088 1 NC_008596.1 identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 6587088 4531434 MSMEG_6526 Mycobacterium smegmatis str. MC2 155 pyridoxamine 5'-phosphate oxidase YP_890739.1 6586660 D 246196 CDS YP_890740.1 118473277 4537707 complement(6587093..6587698) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 6587698 4537707 MSMEG_6527 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890740.1 6587093 R 246196 CDS YP_890741.1 118468519 4535344 6587895..6588647 1 NC_008596.1 hypothetical protein 6588647 4535344 MSMEG_6528 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890741.1 6587895 D 246196 CDS YP_890742.1 118470326 4535204 6588644..6589393 1 NC_008596.1 hypothetical protein 6589393 4535204 MSMEG_6529 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890742.1 6588644 D 246196 CDS YP_890743.1 118468599 4532378 6589413..6589988 1 NC_008596.1 identified by match to protein family HMM PF00510; cytochrome C oxidase subunit III family protein 6589988 4532378 MSMEG_6530 Mycobacterium smegmatis str. MC2 155 cytochrome C oxidase subunit III family protein YP_890743.1 6589413 D 246196 CDS YP_890744.1 118470034 4531649 6589990..6590283 1 NC_008596.1 hypothetical protein 6590283 4531649 MSMEG_6531 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890744.1 6589990 D 246196 CDS YP_890745.1 118471209 4533811 6590293..6590910 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulatory protein 6590910 4533811 MSMEG_6532 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_890745.1 6590293 D 246196 CDS YP_890746.1 118473218 4531068 complement(6590911..6591837) 1 NC_008596.1 hypothetical protein 6591837 4531068 MSMEG_6533 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890746.1 6590911 R 246196 CDS YP_890747.1 118469220 4533274 complement(6591922..6592053) 1 NC_008596.1 hypothetical protein 6592053 4533274 MSMEG_6534 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890747.1 6591922 R 246196 CDS YP_890748.1 118471390 4534984 6592036..6594231 1 NC_008596.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 6594231 fusA 4534984 fusA Mycobacterium smegmatis str. MC2 155 elongation factor G YP_890748.1 6592036 D 246196 CDS YP_890749.1 118472937 4531226 complement(6594233..6594799) 1 NC_008596.1 identified by match to protein family HMM PF02627; carboxymuconolactone decarboxylase 6594799 4531226 MSMEG_6536 Mycobacterium smegmatis str. MC2 155 carboxymuconolactone decarboxylase YP_890749.1 6594233 R 246196 CDS YP_890750.1 118468208 4536650 6594900..6595475 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 6595475 4536650 MSMEG_6537 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890750.1 6594900 D 246196 CDS YP_890751.1 118470118 4534489 6595503..6596210 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; 3-oxoacyl-ACP reductase 6596210 4534489 MSMEG_6538 Mycobacterium smegmatis str. MC2 155 3-oxoacyl-ACP reductase YP_890751.1 6595503 D 246196 CDS YP_890752.1 118468562 4533696 6596379..6597620 1 NC_008596.1 identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996; virulence factor Mce family protein 6597620 4533696 MSMEG_6540 Mycobacterium smegmatis str. MC2 155 virulence factor Mce family protein YP_890752.1 6596379 D 246196 CDS YP_890753.1 118467615 4533077 complement(6597610..6598509) 1 NC_008596.1 hypothetical protein 6598509 4533077 MSMEG_6539 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890753.1 6597610 R 246196 CDS YP_890754.1 118472389 4531799 complement(6598543..6598893) 1 NC_008596.1 identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; anti-sigma factor antagonist 6598893 4531799 MSMEG_6541 Mycobacterium smegmatis str. MC2 155 anti-sigma factor antagonist YP_890754.1 6598543 R 246196 CDS YP_890755.1 118471648 4536485 complement(6598890..6599987) 1 NC_008596.1 identified by match to protein family HMM PF02310; B12-binding domain-containing protein 6599987 4536485 MSMEG_6542 Mycobacterium smegmatis str. MC2 155 B12-binding domain-containing protein YP_890755.1 6598890 R 246196 CDS YP_890756.1 118468830 4535407 complement(6601673..6601822) 1 NC_008596.1 transporter 6601822 4535407 MSMEG_6544 Mycobacterium smegmatis str. MC2 155 transporter YP_890756.1 6601673 R 246196 CDS YP_890757.1 118472076 4537085 complement(6602127..6602834) 1 NC_008596.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase 6602834 4537085 MSMEG_6545 Mycobacterium smegmatis str. MC2 155 phosphoglycerate mutase YP_890757.1 6602127 R 246196 CDS YP_890758.1 118469605 4531577 complement(6602836..6603639) 1 NC_008596.1 identified by match to protein family HMM PF00165; transcriptional regulatory protein 6603639 4531577 MSMEG_6546 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_890758.1 6602836 R 246196 CDS YP_890759.1 118468133 4535221 6603696..6604958 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 6604958 4535221 MSMEG_6547 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_890759.1 6603696 D 246196 CDS YP_890760.1 118468868 4533753 complement(6604992..6605408) 1 NC_008596.1 identified by match to protein family HMM PF00355; Rieske iron-sulfur protein 6605408 4533753 MSMEG_6548 Mycobacterium smegmatis str. MC2 155 Rieske iron-sulfur protein YP_890760.1 6604992 R 246196 CDS YP_890761.1 118471452 4535127 complement(6605424..6606014) 1 NC_008596.1 hypothetical protein 6606014 4535127 MSMEG_6549 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890761.1 6605424 R 246196 CDS YP_890762.1 118473632 4531028 complement(6605939..6606169) 1 NC_008596.1 hypothetical protein 6606169 4531028 MSMEG_6550 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890762.1 6605939 R 246196 CDS YP_890763.1 118469260 4531553 complement(6606004..6606516) 1 NC_008596.1 hypothetical protein 6606516 4531553 MSMEG_6551 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890763.1 6606004 R 246196 CDS YP_890764.1 118473698 4533246 complement(6606582..6607028) 1 NC_008596.1 hypothetical protein 6607028 4533246 MSMEG_6552 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890764.1 6606582 R 246196 CDS YP_890765.1 118469265 4532235 complement(6607155..6608885) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 6608885 4532235 MSMEG_6553 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_890765.1 6607155 R 246196 CDS YP_890766.1 118470205 4532499 complement(6608882..6611464) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00970; match to protein family HMM PF04954; match to protein family HMM PF08021; ABC transporter ATP-binding protein 6611464 4532499 MSMEG_6554 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_890766.1 6608882 R 246196 CDS YP_890767.1 118467572 4532862 complement(6611464..6612174) 1 NC_008596.1 TetR family transcriptional regulator 6612174 4532862 MSMEG_6555 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890767.1 6611464 R 246196 CDS YP_890768.1 118468555 4536107 6612275..6612889 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 6612889 4536107 MSMEG_6556 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_890768.1 6612275 D 246196 CDS YP_890769.1 118474048 4531729 6612886..6613542 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase 6613542 4531729 MSMEG_6558 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_890769.1 6612886 D 246196 CDS YP_890770.1 118470083 4532958 complement(6613539..6614441) 1 NC_008596.1 identified by match to protein family HMM PF00106; dehydrogenase 6614441 4532958 MSMEG_6557 Mycobacterium smegmatis str. MC2 155 dehydrogenase YP_890770.1 6613539 R 246196 CDS YP_890771.1 118472371 4534761 complement(6614451..6614735) 1 NC_008596.1 hypothetical protein 6614735 4534761 MSMEG_6559 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890771.1 6614451 R 246196 CDS YP_890772.1 118469084 4537640 complement(6614824..6615246) 1 NC_008596.1 identified by match to protein family HMM PF01796; acyl dehydratase 6615246 4537640 MSMEG_6560 Mycobacterium smegmatis str. MC2 155 acyl dehydratase YP_890772.1 6614824 R 246196 CDS YP_890773.1 118467530 4535992 complement(6615249..6616469) 1 NC_008596.1 nonspecific lipid-transfer protein 6616469 4535992 MSMEG_6561 Mycobacterium smegmatis str. MC2 155 nonspecific lipid-transfer protein YP_890773.1 6615249 R 246196 CDS YP_890774.1 118470130 4534501 complement(6616478..6618736) 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 6618736 4534501 MSMEG_6562 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_890774.1 6616478 R 246196 CDS YP_890775.1 118468005 4533086 complement(6618733..6619743) 1 NC_008596.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; dihydrokaempferol 4-reductase 6619743 4533086 MSMEG_6563 Mycobacterium smegmatis str. MC2 155 dihydrokaempferol 4-reductase YP_890775.1 6618733 R 246196 CDS YP_890776.1 118472904 4533773 6619839..6620408 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 6620408 4533773 MSMEG_6564 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890776.1 6619839 D 246196 CDS YP_890777.1 118467877 4535251 complement(6620411..6621100) 1 NC_008596.1 hypothetical protein 6621100 4535251 MSMEG_6565 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890777.1 6620411 R 246196 CDS YP_890778.1 118473878 4531126 complement(6621103..6621258) 1 NC_008596.1 hypothetical protein 6621258 4531126 MSMEG_6566 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890778.1 6621103 R 246196 CDS YP_890779.1 118470729 4533944 6621461..6622585 1 NC_008596.1 identified by match to protein family HMM PF00196; LuxR family transcriptional regulator 6622585 4533944 MSMEG_6568 Mycobacterium smegmatis str. MC2 155 LuxR family transcriptional regulator YP_890779.1 6621461 D 246196 CDS YP_890780.1 118470000 4533123 complement(6622524..6623729) 1 NC_008596.1 identified by match to protein family HMM PF04261; match to protein family HMM TIGR01409; match to protein family HMM TIGR01413; iron-dependent peroxidase 6623729 4533123 MSMEG_6567 Mycobacterium smegmatis str. MC2 155 iron-dependent peroxidase YP_890780.1 6622524 R 246196 CDS YP_890781.1 118472880 4534023 complement(6623722..6624216) 1 NC_008596.1 identified by match to protein family HMM PF04314; hypothetical protein 6624216 4534023 MSMEG_6569 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890781.1 6623722 R 246196 CDS YP_890782.1 118473060 4534612 complement(6624209..6625588) 1 NC_008596.1 identified by match to protein family HMM PF03413; match to protein family HMM PF03929; integral membrane protein 6625588 4534612 MSMEG_6570 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_890782.1 6624209 R 246196 CDS YP_890783.1 118472474 4533840 complement(6625702..6626244) 1 NC_008596.1 hypothetical protein 6626244 4533840 MSMEG_6571 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890783.1 6625702 R 246196 CDS YP_890784.1 118473890 4536585 6626297..6626989 1 NC_008596.1 methyltransferase 6626989 4536585 MSMEG_6572 Mycobacterium smegmatis str. MC2 155 methyltransferase YP_890784.1 6626297 D 246196 CDS YP_890785.1 118473198 4533315 complement(6626995..6628662) 1 NC_008596.1 identified by match to protein family HMM PF02720; hypothetical protein 6628662 4533315 MSMEG_6573 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890785.1 6626995 R 246196 CDS YP_890786.1 118469402 4531954 6628925..6629410 1 NC_008596.1 hypothetical protein 6629410 4531954 MSMEG_6574 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890786.1 6628925 D 246196 CDS YP_890787.1 118470122 4534493 6629407..6630636 1 NC_008596.1 identified by match to protein family HMM PF00144; beta-lactamase 6630636 4534493 MSMEG_6575 Mycobacterium smegmatis str. MC2 155 beta-lactamase YP_890787.1 6629407 D 246196 CDS YP_890788.1 118472024 4534104 complement(6630646..6631086) 1 NC_008596.1 identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase 6631086 4534104 MSMEG_6576 Mycobacterium smegmatis str. MC2 155 pyridoxamine 5'-phosphate oxidase YP_890788.1 6630646 R 246196 CDS YP_890789.1 118471179 4534965 6631138..6632682 1 NC_008596.1 identified by match to protein family HMM PF01039; methylmalonyl-CoA carboxyltransferase 12S subunit 6632682 4534965 MSMEG_6577 Mycobacterium smegmatis str. MC2 155 methylmalonyl-CoA carboxyltransferase 12S subunit YP_890789.1 6631138 D 246196 CDS YP_890790.1 118473783 4535141 6632857..6632961 1 NC_008596.1 hypothetical protein 6632961 4535141 MSMEG_6578 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890790.1 6632857 D 246196 CDS YP_890791.1 118473055 4534607 6633239..6633637 1 NC_008596.1 hypothetical protein 6633637 4534607 MSMEG_6579 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890791.1 6633239 D 246196 CDS YP_890792.1 118468942 4532605 6633752..6634201 1 NC_008596.1 identified by match to protein family HMM PF01638; transcriptional regulator family protein 6634201 4532605 MSMEG_6580 Mycobacterium smegmatis str. MC2 155 transcriptional regulator family protein YP_890792.1 6633752 D 246196 CDS YP_890793.1 118467535 4535997 6634284..6634952 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 6634952 4535997 MSMEG_6581 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_890793.1 6634284 D 246196 CDS YP_890794.1 118470955 4534527 6635047..6636249 1 NC_008596.1 identified by match to protein family HMM PF00756; antigen 85-C 6636249 4534527 MSMEG_6583 Mycobacterium smegmatis str. MC2 155 antigen 85-C YP_890794.1 6635047 D 246196 CDS YP_890795.1 118470616 4532974 complement(6636246..6637394) 1 NC_008596.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase domain-containing protein 6637394 4532974 MSMEG_6582 Mycobacterium smegmatis str. MC2 155 pyridine nucleotide-disulfide oxidoreductase domain-containing protein YP_890795.1 6636246 R 246196 CDS YP_890796.1 118469458 4535721 6637418..6638608 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 6638608 4535721 MSMEG_6584 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_890796.1 6637418 D 246196 CDS YP_890797.1 118470069 4535962 6638601..6639872 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 6639872 4535962 MSMEG_6585 Mycobacterium smegmatis str. MC2 155 acyl-CoA dehydrogenase YP_890797.1 6638601 D 246196 CDS YP_890798.1 118467847 4535474 6639920..6640762 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 6640762 4535474 MSMEG_6586 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_890798.1 6639920 D 246196 CDS YP_890799.1 118467400 4535821 6640759..6641664 1 NC_008596.1 identified by match to protein family HMM PF01557; fumarylacetoacetate 6641664 4535821 MSMEG_6588 Mycobacterium smegmatis str. MC2 155 fumarylacetoacetate YP_890799.1 6640759 D 246196 CDS YP_890800.1 118468634 4533566 complement(6641661..6645611) 1 NC_008596.1 identified by match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM PF07717; match to protein family HMM TIGR01967; ATP-dependent helicase HrpA 6645611 hrpA 4533566 hrpA Mycobacterium smegmatis str. MC2 155 ATP-dependent helicase HrpA YP_890800.1 6641661 R 246196 CDS YP_890801.1 118468863 4535636 complement(6645663..6646724) 1 NC_008596.1 identified by similarity to GB:CAD18826.1; ISMsm5, transposase 6646724 4535636 MSMEG_6589 Mycobacterium smegmatis str. MC2 155 ISMsm5, transposase YP_890801.1 6645663 R 246196 CDS YP_890802.1 118473453 4534897 6646800..6647195 1 NC_008596.1 hypothetical protein 6647195 4534897 MSMEG_6590 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890802.1 6646800 D 246196 CDS YP_890803.1 118467745 4535644 6647198..6648052 1 NC_008596.1 identified by match to protein family HMM PF00106; short-chain dehydrogenase/reductase SDR 6648052 4535644 MSMEG_6592 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase SDR YP_890803.1 6647198 D 246196 CDS YP_890804.1 118468318 4533797 complement(6648028..6649758) 1 NC_008596.1 identified by match to protein family HMM PF00266; class V aminotransferase 6649758 4533797 MSMEG_6591 Mycobacterium smegmatis str. MC2 155 class V aminotransferase YP_890804.1 6648028 R 246196 CDS YP_890805.1 118469770 4532834 complement(6649755..6650522) 1 NC_008596.1 identified by match to protein family HMM PF00005; ATP-binding protein 6650522 4532834 MSMEG_6593 Mycobacterium smegmatis str. MC2 155 ATP-binding protein YP_890805.1 6649755 R 246196 CDS YP_890806.1 118467773 4533404 complement(6650515..6651408) 1 NC_008596.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter permease 6651408 4533404 MSMEG_6594 Mycobacterium smegmatis str. MC2 155 amino acid ABC transporter permease YP_890806.1 6650515 R 246196 CDS YP_890807.1 118472644 4537663 complement(6651395..6652369) 1 NC_008596.1 identified by match to protein family HMM PF00497; hypothetical protein 6652369 4537663 MSMEG_6595 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890807.1 6651395 R 246196 CDS YP_890808.1 118472782 4531873 complement(6652518..6653426) 1 NC_008596.1 hypothetical protein 6653426 4531873 MSMEG_6596 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890808.1 6652518 R 246196 CDS YP_890809.1 118470878 4536810 6653552..6654313 1 NC_008596.1 hydrolase of the alpha/beta superfamily protein 6654313 4536810 MSMEG_6597 Mycobacterium smegmatis str. MC2 155 hydrolase of the alpha/beta superfamily protein YP_890809.1 6653552 D 246196 CDS YP_890810.1 118469086 4537642 6654335..6654787 1 NC_008596.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; subunit beta of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; riboflavin synthase subunit beta 6654787 4537642 MSMEG_6598 Mycobacterium smegmatis str. MC2 155 riboflavin synthase subunit beta YP_890810.1 6654335 D 246196 CDS YP_890811.1 118470285 4537546 6656133..6657125 1 NC_008596.1 identified by match to protein family HMM PF00665; transposase 6657125 4537546 MSMEG_6600 Mycobacterium smegmatis str. MC2 155 transposase YP_890811.1 6656133 D 246196 CDS YP_890812.1 118467585 4531401 complement(6657133..6657654) 1 NC_008596.1 hypothetical protein 6657654 4531401 MSMEG_6601 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890812.1 6657133 R 246196 CDS YP_890813.1 118472870 4531354 complement(6657780..6658817) 1 NC_008596.1 identified by match to protein family HMM PF00296; oxidoreductase 6658817 4531354 MSMEG_6602 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_890813.1 6657780 R 246196 CDS YP_890814.1 118472178 4533716 complement(6658820..6659215) 1 NC_008596.1 NADH:flavin oxidoreductase 6659215 4533716 MSMEG_6603 Mycobacterium smegmatis str. MC2 155 NADH:flavin oxidoreductase YP_890814.1 6658820 R 246196 CDS YP_890815.1 118471868 4536283 6659358..6659954 1 NC_008596.1 identified by match to protein family HMM PF03551; transcriptional regulatory protein 6659954 4536283 MSMEG_6605 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_890815.1 6659358 D 246196 CDS YP_890816.1 118473411 4537398 complement(6659918..6660517) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 6660517 4537398 MSMEG_6604 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890816.1 6659918 R 246196 CDS YP_890817.1 118468394 4534783 complement(6660569..6661243) 1 NC_008596.1 hypothetical protein 6661243 4534783 MSMEG_6606 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890817.1 6660569 R 246196 CDS YP_890818.1 118470315 4535193 complement(6661240..6662100) 1 NC_008596.1 hypothetical protein 6662100 4535193 MSMEG_6607 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890818.1 6661240 R 246196 CDS YP_890819.1 118469806 4535947 complement(6662097..6663047) 1 NC_008596.1 hypothetical protein 6663047 4535947 MSMEG_6608 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890819.1 6662097 R 246196 CDS YP_890820.1 118473308 4535180 6663002..6663529 1 NC_008596.1 hypothetical protein 6663529 4535180 MSMEG_6611 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890820.1 6663002 D 246196 CDS YP_890821.1 118470025 4531640 complement(6663038..6663502) 1 NC_008596.1 hypothetical protein 6663502 4531640 MSMEG_6609 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890821.1 6663038 R 246196 CDS YP_890822.1 118472506 4533736 complement(6663492..6664352) 1 NC_008596.1 hypothetical protein 6664352 4533736 MSMEG_6610 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890822.1 6663492 R 246196 CDS YP_890823.1 118470826 4532512 complement(6664363..6665364) 1 NC_008596.1 identified by match to protein family HMM PF07726; match to protein family HMM PF07728; ATPase, MoxR family protein 6665364 moxR 4532512 moxR Mycobacterium smegmatis str. MC2 155 ATPase, MoxR family protein YP_890823.1 6664363 R 246196 CDS YP_890824.1 118471584 4534446 complement(6665394..6666287) 1 NC_008596.1 hypothetical protein 6666287 4534446 MSMEG_6613 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890824.1 6665394 R 246196 CDS YP_890825.1 118468448 4536896 complement(6666377..6667543) 1 NC_008596.1 identified by match to protein family HMM PF00149; match to protein family HMM TIGR01409; integral membrane protein 6667543 4536896 MSMEG_6614 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_890825.1 6666377 R 246196 CDS YP_890826.1 118469147 4532564 complement(6667571..6668242) 1 NC_008596.1 hypothetical protein 6668242 4532564 MSMEG_6615 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890826.1 6667571 R 246196 CDS YP_890827.1 118471695 4536457 complement(6668245..6669426) 1 NC_008596.1 identified by match to protein family HMM PF00107; S-(hydroxymethyl)glutathione dehydrogenase 6669426 4536457 MSMEG_6616 Mycobacterium smegmatis str. MC2 155 S-(hydroxymethyl)glutathione dehydrogenase YP_890827.1 6668245 R 246196 CDS YP_890828.1 118469840 4532731 complement(6672072..6672791) 1 NC_008596.1 identified by match to protein family HMM PF00293; nudix hydrolase 6672791 4532731 MSMEG_6617 Mycobacterium smegmatis str. MC2 155 nudix hydrolase YP_890828.1 6672072 R 246196 CDS YP_890829.1 118470976 4531896 complement(6674114..6674437) 1 NC_008596.1 hypothetical protein 6674437 4531896 MSMEG_6620 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890829.1 6674114 R 246196 CDS YP_890830.1 118473342 4532007 complement(6674557..6675408) 1 NC_008596.1 identified by match to protein family HMM PF00296; luciferase 6675408 4532007 MSMEG_6621 Mycobacterium smegmatis str. MC2 155 luciferase YP_890830.1 6674557 R 246196 CDS YP_890831.1 118469710 4537215 6675471..6676661 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 monooxygenase 6676661 4537215 MSMEG_6622 Mycobacterium smegmatis str. MC2 155 cytochrome P450 monooxygenase YP_890831.1 6675471 D 246196 CDS YP_890832.1 118467451 4535460 complement(6676667..6677446) 1 NC_008596.1 identified by match to protein family HMM PF00106; dehydrogenase 6677446 4535460 MSMEG_6623 Mycobacterium smegmatis str. MC2 155 dehydrogenase YP_890832.1 6676667 R 246196 CDS YP_890833.1 118468551 4536103 complement(6677450..6678007) 1 NC_008596.1 hypothetical protein 6678007 4536103 MSMEG_6624 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890833.1 6677450 R 246196 CDS YP_890834.1 118472560 4534144 complement(6678040..6678462) 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase 6678462 4534144 MSMEG_6625 Mycobacterium smegmatis str. MC2 155 glyoxalase YP_890834.1 6678040 R 246196 CDS YP_890835.1 118468943 4532606 complement(6678469..6679242) 1 NC_008596.1 identified by match to protein family HMM PF00106; short-chain dehydrogenase/reductase SDR 6679242 4532606 MSMEG_6626 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase SDR YP_890835.1 6678469 R 246196 CDS YP_890836.1 118468009 4533090 6679388..6680059 1 NC_008596.1 identified by match to protein family HMM PF00881; nitroreductase 6680059 4533090 MSMEG_6627 Mycobacterium smegmatis str. MC2 155 nitroreductase YP_890836.1 6679388 D 246196 CDS YP_890837.1 118473373 4536617 6680121..6680732 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 6680732 4536617 MSMEG_6628 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890837.1 6680121 D 246196 CDS YP_890838.1 118472602 4536880 6680779..6681129 1 NC_008596.1 identified by match to protein family HMM PF00903; glyoxalase 6681129 4536880 MSMEG_6630 Mycobacterium smegmatis str. MC2 155 glyoxalase YP_890838.1 6680779 D 246196 CDS YP_890839.1 118470691 4532528 complement(6681119..6682018) 1 NC_008596.1 identified by match to protein family HMM PF00698; match to protein family HMM TIGR03131; malonate decarboxylase subunit epsilon 6682018 mdcH 4532528 mdcH Mycobacterium smegmatis str. MC2 155 malonate decarboxylase subunit epsilon YP_890839.1 6681119 R 246196 CDS YP_890840.1 118468238 4537423 complement(6682015..6682620) 1 NC_008596.1 Catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein; phosphoribosyl-dephospho-CoA transferase 6682620 mdcG 4537423 mdcG Mycobacterium smegmatis str. MC2 155 phosphoribosyl-dephospho-CoA transferase YP_890840.1 6682015 R 246196 CDS YP_890841.1 118468806 4534062 complement(6682617..6684233) 1 NC_008596.1 identified by match to protein family HMM PF01039; match to protein family HMM PF06833; match to protein family HMM TIGR03133; match to protein family HMM TIGR03134; subunit beta of malonate decarboxylase 6684233 4534062 MSMEG_6632 Mycobacterium smegmatis str. MC2 155 subunit beta of malonate decarboxylase YP_890841.1 6682617 R 246196 CDS YP_890842.1 118467753 4535653 complement(6684230..6684538) 1 NC_008596.1 identified by match to protein family HMM PF06857; match to protein family HMM TIGR03130; malonate decarboxylase ACP 6684538 mdcC 4535653 mdcC Mycobacterium smegmatis str. MC2 155 malonate decarboxylase ACP YP_890842.1 6684230 R 246196 CDS YP_890843.1 118473644 4533512 complement(6684526..6685389) 1 NC_008596.1 identified by match to protein family HMM PF01874; match to protein family HMM TIGR03132; triphosphoribosyl-dephospho-CoA synthase 6685389 mdcB 4533512 mdcB Mycobacterium smegmatis str. MC2 155 triphosphoribosyl-dephospho-CoA synthase YP_890843.1 6684526 R 246196 CDS YP_890844.1 118468139 4532682 complement(6685394..6686005) 1 NC_008596.1 malonate decarboxylase subunit alpha 6686005 4532682 MSMEG_6635 Mycobacterium smegmatis str. MC2 155 malonate decarboxylase subunit alpha YP_890844.1 6685394 R 246196 CDS YP_890845.1 118472545 4532672 complement(6686470..6687090) 1 NC_008596.1 identified by match to protein family HMM PF00081; match to protein family HMM PF02777; [Mn] superoxide dismutase 6687090 4532672 MSMEG_6636 Mycobacterium smegmatis str. MC2 155 [Mn] superoxide dismutase YP_890845.1 6686470 R 246196 CDS YP_890846.1 118469351 4533175 6687242..6687499 1 NC_008596.1 hypothetical protein 6687499 4533175 MSMEG_6637 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890846.1 6687242 D 246196 CDS YP_890847.1 118467774 4533405 complement(6687551..6689866) 1 NC_008596.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 6689866 metE 4533405 metE Mycobacterium smegmatis str. MC2 155 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_890847.1 6687551 R 246196 CDS YP_890848.1 118473927 4537365 complement(6690221..6690898) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 6690898 4537365 MSMEG_6639 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_890848.1 6690221 R 246196 CDS YP_890849.1 118468496 4537685 complement(6690946..6691068) 1 NC_008596.1 hypothetical protein 6691068 4537685 MSMEG_6640 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890849.1 6690946 R 246196 CDS YP_890850.1 118473392 4537010 6690967..6692328 1 NC_008596.1 nitrilotriacetate monooxygenase component A 6692328 4537010 MSMEG_6641 Mycobacterium smegmatis str. MC2 155 nitrilotriacetate monooxygenase component A YP_890850.1 6690967 D 246196 CDS YP_890851.1 118470333 4534916 6692329..6693528 1 NC_008596.1 identified by match to protein family HMM PF02515; caib/baif family protein 6693528 4534916 MSMEG_6642 Mycobacterium smegmatis str. MC2 155 caib/baif family protein YP_890851.1 6692329 D 246196 CDS YP_890852.1 118473647 4533515 6693546..6694457 1 NC_008596.1 identified by match to protein family HMM PF03328; malyl-CoA lyase 6694457 4533515 MSMEG_6644 Mycobacterium smegmatis str. MC2 155 malyl-CoA lyase YP_890852.1 6693546 D 246196 CDS YP_890853.1 118472941 4531757 complement(6694441..6695859) 1 NC_008596.1 identified by match to protein family HMM PF01381; match to protein family HMM PF06114; DNA-binding protein 6695859 4531757 MSMEG_6643 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_890853.1 6694441 R 246196 CDS YP_890854.1 118472393 4531803 6695968..6697482 1 NC_008596.1 identified by match to protein family HMM PF03972; 2-methylcitrate dehydratase 6697482 4531803 MSMEG_6645 Mycobacterium smegmatis str. MC2 155 2-methylcitrate dehydratase YP_890854.1 6695968 D 246196 CDS YP_890855.1 118469352 4533176 6697479..6698396 1 NC_008596.1 identified by similarity to SP:Q8NSL2; match to protein family HMM TIGR02317; methylisocitrate lyase 6698396 prpB 4533176 prpB Mycobacterium smegmatis str. MC2 155 methylisocitrate lyase YP_890855.1 6697479 D 246196 CDS YP_890856.1 118471746 4536393 6698393..6699523 1 NC_008596.1 catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; citrate synthase 6699523 4536393 MSMEG_6647 Mycobacterium smegmatis str. MC2 155 citrate synthase YP_890856.1 6698393 D 246196 CDS YP_890857.1 118470447 4534510 6699516..6702911 1 NC_008596.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 6702911 pyc 4534510 pyc Mycobacterium smegmatis str. MC2 155 pyruvate carboxylase YP_890857.1 6699516 D 246196 CDS YP_890858.1 118470282 4537543 complement(6702915..6703805) 1 NC_008596.1 hypothetical protein 6703805 4537543 MSMEG_6649 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890858.1 6702915 R 246196 CDS YP_890859.1 118468282 4535769 6704173..6704352 1 NC_008596.1 hypothetical protein 6704352 4535769 MSMEG_6650 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890859.1 6704173 D 246196 CDS YP_890860.1 118473310 4535182 complement(6704571..6704684) 1 NC_008596.1 hypothetical protein 6704684 4535182 MSMEG_6651 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890860.1 6704571 R 246196 CDS YP_890861.1 118467980 4535162 complement(6704714..6705124) 1 NC_008596.1 hypothetical protein 6705124 4535162 MSMEG_6652 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890861.1 6704714 R 246196 CDS YP_890862.1 118468309 4533787 6708371..6709774 1 NC_008596.1 identified by match to protein family HMM PF01609; TnpC protein 6709774 4533787 MSMEG_6654 Mycobacterium smegmatis str. MC2 155 TnpC protein YP_890862.1 6708371 D 246196 CDS YP_890863.1 118469289 4532628 complement(6709869..6710645) 1 NC_008596.1 hypothetical protein 6710645 4532628 MSMEG_6655 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890863.1 6709869 R 246196 CDS YP_890864.1 118473687 4531084 complement(6710711..6712219) 1 NC_008596.1 identified by match to protein family HMM PF02899; hypothetical protein 6712219 4531084 MSMEG_6656 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890864.1 6710711 R 246196 CDS YP_890865.1 118471471 4534390 complement(6712209..6713342) 1 NC_008596.1 subunit alpha of malonate decarboxylase 6713342 4534390 MSMEG_6657 Mycobacterium smegmatis str. MC2 155 subunit alpha of malonate decarboxylase YP_890865.1 6712209 R 246196 CDS YP_890866.1 118472155 4535681 complement(6713339..6714169) 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 6714169 4535681 MSMEG_6658 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_890866.1 6713339 R 246196 CDS YP_890867.1 118469456 4535719 6714430..6715866 1 NC_008596.1 identified by match to protein family HMM PF02133; permease, cytosine/purines, uracil, thiamine, allantoin family protein 6715866 4535719 MSMEG_6660 Mycobacterium smegmatis str. MC2 155 permease, cytosine/purines, uracil, thiamine, allantoin family protein YP_890867.1 6714430 D 246196 CDS YP_890868.1 118468319 4533798 complement(6715856..6716116) 1 NC_008596.1 hypothetical protein 6716116 4533798 MSMEG_6659 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890868.1 6715856 R 246196 CDS YP_890869.1 118467412 4535834 6716067..6716909 1 NC_008596.1 identified by match to protein family HMM PF02409; O-methyltransferase 6716909 4535834 MSMEG_6661 Mycobacterium smegmatis str. MC2 155 O-methyltransferase YP_890869.1 6716067 D 246196 CDS YP_890870.1 118473122 4531849 6716996..6717841 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 6717841 4531849 MSMEG_6662 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_890870.1 6716996 D 246196 CDS YP_890871.1 118467780 4535701 complement(6717845..6718588) 1 NC_008596.1 C5-O-methyltransferase 6718588 4535701 MSMEG_6663 Mycobacterium smegmatis str. MC2 155 C5-O-methyltransferase YP_890871.1 6717845 R 246196 CDS YP_890872.1 118471305 4534645 complement(6718615..6719460) 1 NC_008596.1 identified by match to protein family HMM PF02219; methylenetetrahydrofolate reductase 6719460 4534645 MSMEG_6664 Mycobacterium smegmatis str. MC2 155 methylenetetrahydrofolate reductase YP_890872.1 6718615 R 246196 CDS YP_890873.1 118473033 4533186 complement(6719637..6719912) 1 NC_008596.1 integral membrane protein 6719912 4533186 MSMEG_6665 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_890873.1 6719637 R 246196 CDS YP_890874.1 118473367 4530843 complement(6719967..6720425) 1 NC_008596.1 hypothetical protein 6720425 4530843 MSMEG_6666 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890874.1 6719967 R 246196 CDS YP_890875.1 118468442 4536890 complement(6720444..6720974) 1 NC_008596.1 hypothetical protein 6720974 4536890 MSMEG_6667 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890875.1 6720444 R 246196 CDS YP_890876.1 118472306 4532778 6721204..6722343 1 NC_008596.1 ABC transporter periplasmic protein 6722343 4532778 MSMEG_6668 Mycobacterium smegmatis str. MC2 155 ABC transporter periplasmic protein YP_890876.1 6721204 D 246196 CDS YP_890877.1 118471367 4535274 6722340..6723293 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 6723293 4535274 MSMEG_6669 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_890877.1 6722340 D 246196 CDS YP_890878.1 118473681 4531078 6723290..6724114 1 NC_008596.1 identified by match to protein family HMM PF00528; ABC transporter permease 6724114 4531078 MSMEG_6670 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_890878.1 6723290 D 246196 CDS YP_890879.1 118472934 4531223 6724124..6725167 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM PF03459; sulfate/thiosulfate import ATP-binding protein CysA 6725167 4531223 MSMEG_6671 Mycobacterium smegmatis str. MC2 155 sulfate/thiosulfate import ATP-binding protein CysA YP_890879.1 6724124 D 246196 CDS YP_890880.1 118468430 4535588 6725164..6726183 1 NC_008596.1 identified by match to protein family HMM PF01663; type I phosphodiesterase / nucleotide pyrophosphatase superfamily protein 6726183 4535588 MSMEG_6672 Mycobacterium smegmatis str. MC2 155 type I phosphodiesterase / nucleotide pyrophosphatase superfamily protein YP_890880.1 6725164 D 246196 CDS YP_890881.1 118467438 4535447 6726242..6727711 1 NC_008596.1 identified by match to protein family HMM PF01425; 6-aminohexanoate-cyclic-dimer hydrolase 6727711 4535447 MSMEG_6673 Mycobacterium smegmatis str. MC2 155 6-aminohexanoate-cyclic-dimer hydrolase YP_890881.1 6726242 D 246196 CDS YP_890882.1 118469887 4533206 complement(6727730..6728623) 1 NC_008596.1 identified by similarity to SP:P18561; match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 6728623 4533206 MSMEG_6674 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_890882.1 6727730 R 246196 CDS YP_890883.1 118469795 4535935 complement(6728634..6728810) 1 NC_008596.1 hypothetical protein 6728810 4535935 MSMEG_6675 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890883.1 6728634 R 246196 CDS YP_890884.1 118472480 4532431 6728933..6729547 1 NC_008596.1 transmembrane protein 6729547 4532431 MSMEG_6676 Mycobacterium smegmatis str. MC2 155 transmembrane protein YP_890884.1 6728933 D 246196 CDS YP_890885.1 118468609 4532389 6729674..6730159 1 NC_008596.1 hypothetical protein 6730159 4532389 MSMEG_6678 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890885.1 6729674 D 246196 CDS YP_890886.1 118468045 4534159 complement(6730109..6730969) 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 6730969 4534159 MSMEG_6677 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_890886.1 6730109 R 246196 CDS YP_890887.1 118470435 4532226 6731106..6732014 1 NC_008596.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase 6732014 4532226 MSMEG_6679 Mycobacterium smegmatis str. MC2 155 metallo-beta-lactamase YP_890887.1 6731106 D 246196 CDS YP_890888.1 118471630 4536505 complement(6732021..6732491) 1 NC_008596.1 identified by match to protein family HMM PF04224; integral membrane protein 6732491 4536505 MSMEG_6680 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_890888.1 6732021 R 246196 CDS YP_890889.1 118471256 4531532 complement(6732488..6732724) 1 NC_008596.1 hypothetical protein 6732724 4531532 MSMEG_6681 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890889.1 6732488 R 246196 CDS YP_890890.1 118472630 4537280 complement(6732721..6733344) 1 NC_008596.1 identified by match to protein family HMM TIGR02937; RNA polymerase sigma-70 factor 6733344 4537280 MSMEG_6682 Mycobacterium smegmatis str. MC2 155 RNA polymerase sigma-70 factor YP_890890.1 6732721 R 246196 CDS YP_890891.1 118470621 4532979 6733486..6733965 1 NC_008596.1 identified by match to protein family HMM PF00578; peroxiredoxin 6733965 4532979 MSMEG_6683 Mycobacterium smegmatis str. MC2 155 peroxiredoxin YP_890891.1 6733486 D 246196 CDS YP_890892.1 118472848 4537444 6733962..6735056 1 NC_008596.1 agarase 6735056 4537444 MSMEG_6684 Mycobacterium smegmatis str. MC2 155 agarase YP_890892.1 6733962 D 246196 CDS YP_890893.1 118471922 4536223 6735247..6736599 1 NC_008596.1 identified by match to protein family HMM PF00202; match to protein family HMM TIGR00700; 4-aminobutyrate aminotransferase 6736599 gabT 4536223 gabT Mycobacterium smegmatis str. MC2 155 4-aminobutyrate aminotransferase YP_890893.1 6735247 D 246196 CDS YP_890894.1 118473535 4533635 6736619..6737812 1 NC_008596.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; glutaryl-CoA dehydrogenase 6737812 4533635 MSMEG_6686 Mycobacterium smegmatis str. MC2 155 glutaryl-CoA dehydrogenase YP_890894.1 6736619 D 246196 CDS YP_890895.1 118469015 4536066 6737809..6739272 1 NC_008596.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 6739272 4536066 MSMEG_6687 Mycobacterium smegmatis str. MC2 155 aldehyde dehydrogenase YP_890895.1 6737809 D 246196 CDS YP_890896.1 118473524 4533624 6739269..6740372 1 NC_008596.1 identified by match to protein family HMM PF02515; CAIB/BAIF family protein 6740372 4533624 MSMEG_6689 Mycobacterium smegmatis str. MC2 155 CAIB/BAIF family protein YP_890896.1 6739269 D 246196 CDS YP_890897.1 118472838 4537063 complement(6740365..6741876) 1 NC_008596.1 identified by match to protein family HMM PF07905; regulatory protein 6741876 4537063 MSMEG_6688 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_890897.1 6740365 R 246196 CDS YP_890898.1 118467549 4535502 complement(6741873..6742682) 1 NC_008596.1 identified by match to protein family HMM PF00117; match to protein family HMM PF07722; glutamine amidotransferase 6742682 4535502 MSMEG_6690 Mycobacterium smegmatis str. MC2 155 glutamine amidotransferase YP_890898.1 6741873 R 246196 CDS YP_890899.1 118469422 4534318 complement(6742679..6743425) 1 NC_008596.1 identified by match to protein family HMM PF00117; match to protein family HMM PF07722; glutamine amidotransferase 6743425 4534318 MSMEG_6691 Mycobacterium smegmatis str. MC2 155 glutamine amidotransferase YP_890899.1 6742679 R 246196 CDS YP_890900.1 118472075 4537084 complement(6743389..6744108) 1 NC_008596.1 identified by match to protein family HMM PF00497; glutamine-binding periplasmic protein 6744108 4537084 MSMEG_6692 Mycobacterium smegmatis str. MC2 155 glutamine-binding periplasmic protein YP_890900.1 6743389 R 246196 CDS YP_890901.1 118473216 4531066 complement(6744105..6745490) 1 NC_008596.1 identified by match to protein family HMM PF00120; glutamine synthetase 6745490 4531066 MSMEG_6693 Mycobacterium smegmatis str. MC2 155 glutamine synthetase YP_890901.1 6744105 R 246196 CDS YP_890902.1 118470562 4531505 complement(6745496..6745684) 1 NC_008596.1 hypothetical protein 6745684 4531505 MSMEG_6694 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890902.1 6745496 R 246196 CDS YP_890903.1 118468688 4535911 complement(6745730..6746932) 1 NC_008596.1 identified by match to protein family HMM PF00067; cytochrome P450 6746932 4535911 MSMEG_6695 Mycobacterium smegmatis str. MC2 155 cytochrome P450 YP_890903.1 6745730 R 246196 CDS YP_890904.1 118474031 4533444 complement(6747083..6747487) 1 NC_008596.1 hypothetical protein 6747487 4533444 MSMEG_6696 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890904.1 6747083 R 246196 CDS YP_890905.1 118471971 4536157 6747206..6748528 1 NC_008596.1 identified by similarity to GP:150005; match to protein family HMM PF01610; IS1096, tnpA protein 6748528 4536157 MSMEG_6697 Mycobacterium smegmatis str. MC2 155 IS1096, tnpA protein YP_890905.1 6747206 D 246196 CDS YP_890906.1 118470121 4534492 complement(6748536..6749162) 1 NC_008596.1 identified by similarity to GP:150004; match to protein family HMM PF07929; IS1096, tnpR protein 6749162 4534492 MSMEG_6698 Mycobacterium smegmatis str. MC2 155 IS1096, tnpR protein YP_890906.1 6748536 R 246196 CDS YP_890907.1 118470849 4534304 complement(6749195..6750064) 1 NC_008596.1 hypothetical protein 6750064 4534304 MSMEG_6699 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890907.1 6749195 R 246196 CDS YP_890908.1 118467461 4536606 complement(6750061..6750798) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; regulatory protein 6750798 4536606 MSMEG_6700 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_890908.1 6750061 R 246196 CDS YP_890909.1 118468191 4534405 6750984..6752480 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 6752480 4534405 MSMEG_6701 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_890909.1 6750984 D 246196 CDS YP_890910.1 118467602 4531418 6752526..6753908 1 NC_008596.1 identified by match to protein family HMM PF00171; [NADP+] succinate-semialdehyde dehydrogenase 6753908 4531418 MSMEG_6702 Mycobacterium smegmatis str. MC2 155 [NADP+] succinate-semialdehyde dehydrogenase YP_890910.1 6752526 D 246196 CDS YP_890911.1 118470085 4532960 6753954..6754784 1 NC_008596.1 N5,N10- methylenetetrahydromethanopterin reductase-related protein 6754784 4532960 MSMEG_6703 Mycobacterium smegmatis str. MC2 155 N5,N10- methylenetetrahydromethanopterin reductase-related protein YP_890911.1 6753954 D 246196 CDS YP_890912.1 118467641 4534216 6754873..6755619 1 NC_008596.1 identified by match to protein family HMM PF01614; regulatory protein 6755619 4534216 MSMEG_6705 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_890912.1 6754873 D 246196 CDS YP_890913.1 118472929 4531218 complement(6755616..6756428) 1 NC_008596.1 identified by match to protein family HMM PF01488; shikimate 5-dehydrogenase 6756428 4531218 MSMEG_6704 Mycobacterium smegmatis str. MC2 155 shikimate 5-dehydrogenase YP_890913.1 6755616 R 246196 CDS YP_890914.1 118472000 4536147 6756213..6756533 1 NC_008596.1 hypothetical protein 6756533 4536147 MSMEG_6707 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890914.1 6756213 D 246196 CDS YP_890915.1 118470789 4536072 complement(6756453..6756557) 1 NC_008596.1 hypothetical protein 6756557 4536072 MSMEG_6706 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890915.1 6756453 R 246196 CDS YP_890916.1 118470633 4532392 6756549..6757454 1 NC_008596.1 identified by match to protein family HMM PF00561; epoxide hydrolase 6757454 4532392 MSMEG_6708 Mycobacterium smegmatis str. MC2 155 epoxide hydrolase YP_890916.1 6756549 D 246196 CDS YP_890917.1 118469457 4535720 6757445..6758197 1 NC_008596.1 identified by match to protein family HMM PF00106; cyclopentanol dehydrogenase 6758197 4535720 MSMEG_6709 Mycobacterium smegmatis str. MC2 155 cyclopentanol dehydrogenase YP_890917.1 6757445 D 246196 CDS YP_890918.1 118471353 4533237 6758217..6759065 1 NC_008596.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 6759065 4533237 MSMEG_6710 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_890918.1 6758217 D 246196 CDS YP_890919.1 118469890 4533209 complement(6759120..6760487) 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690; 4-hydroxybenzoate transporter 6760487 4533209 MSMEG_6711 Mycobacterium smegmatis str. MC2 155 4-hydroxybenzoate transporter YP_890919.1 6759120 R 246196 CDS YP_890920.1 118474039 4531720 complement(6760497..6761582) 1 NC_008596.1 identified by match to protein family HMM PF00465; maleylacetate reductase 6761582 4531720 MSMEG_6712 Mycobacterium smegmatis str. MC2 155 maleylacetate reductase YP_890920.1 6760497 R 246196 CDS YP_890921.1 118472935 4531224 complement(6761579..6762454) 1 NC_008596.1 identified by match to protein family HMM PF00775; match to protein family HMM PF04444; hydroxyquinol 1,2-dioxygenase 6762454 4531224 MSMEG_6713 Mycobacterium smegmatis str. MC2 155 hydroxyquinol 1,2-dioxygenase YP_890921.1 6761579 R 246196 CDS YP_890922.1 118468677 4535900 complement(6762451..6763068) 1 NC_008596.1 hypothetical protein 6763068 4535900 MSMEG_6714 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890922.1 6762451 R 246196 CDS YP_890923.1 118470569 4531512 6763271..6764110 1 NC_008596.1 identified by match to protein family HMM PF01261; AP endonuclease, family protein 2 6764110 4531512 MSMEG_6715 Mycobacterium smegmatis str. MC2 155 AP endonuclease, family protein 2 YP_890923.1 6763271 D 246196 CDS YP_890924.1 118467677 4536943 6764137..6764958 1 NC_008596.1 identified by match to protein family HMM PF01261; AP endonuclease, family protein 2 6764958 4536943 MSMEG_6716 Mycobacterium smegmatis str. MC2 155 AP endonuclease, family protein 2 YP_890924.1 6764137 D 246196 CDS YP_890925.1 118472681 4532946 6764976..6766046 1 NC_008596.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; oxidoreductase, Gfo/Idh/MocA family protein 6766046 4532946 MSMEG_6717 Mycobacterium smegmatis str. MC2 155 oxidoreductase, Gfo/Idh/MocA family protein YP_890925.1 6764976 D 246196 CDS YP_890926.1 118473238 4536925 6766137..6767504 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; transporter major facilitator family protein 6767504 4536925 MSMEG_6718 Mycobacterium smegmatis str. MC2 155 transporter major facilitator family protein YP_890926.1 6766137 D 246196 CDS YP_890927.1 118471483 4531884 6767501..6768358 1 NC_008596.1 identified by match to protein family HMM PF00561; epoxide hydrolase 6768358 4531884 MSMEG_6719 Mycobacterium smegmatis str. MC2 155 epoxide hydrolase YP_890927.1 6767501 D 246196 CDS YP_890928.1 118472253 4531562 complement(6768359..6769222) 1 NC_008596.1 identified by match to protein family HMM PF00561; epoxide hydrolase 6769222 4531562 MSMEG_6720 Mycobacterium smegmatis str. MC2 155 epoxide hydrolase YP_890928.1 6768359 R 246196 CDS YP_890929.1 118471243 4531519 complement(6769236..6769355) 1 NC_008596.1 hypothetical protein 6769355 4531519 MSMEG_6721 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890929.1 6769236 R 246196 CDS YP_890930.1 118468069 4533016 6769511..6770410 1 NC_008596.1 hypothetical protein 6770410 4533016 MSMEG_6722 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890930.1 6769511 D 246196 CDS YP_890931.1 118469016 4536067 complement(6770504..6771022) 1 NC_008596.1 hypothetical protein 6771022 4536067 MSMEG_6723 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890931.1 6770504 R 246196 CDS YP_890932.1 118467353 4534712 complement(6771009..6771791) 1 NC_008596.1 identified by match to protein family HMM PF02361; cobalt ABC transporter 6771791 4534712 MSMEG_6724 Mycobacterium smegmatis str. MC2 155 cobalt ABC transporter YP_890932.1 6771009 R 246196 CDS YP_890933.1 118469399 4532293 complement(6771788..6773263) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 6773263 4532293 MSMEG_6725 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_890933.1 6771788 R 246196 CDS YP_890934.1 118472237 4532458 complement(6773260..6773889) 1 NC_008596.1 ABC transporter permease 6773889 4532458 MSMEG_6726 Mycobacterium smegmatis str. MC2 155 ABC transporter permease YP_890934.1 6773260 R 246196 CDS YP_890935.1 118471219 4533822 6774109..6775455 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 6775455 4533822 MSMEG_6727 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_890935.1 6774109 D 246196 CDS YP_890936.1 118473226 4536912 6775459..6775947 1 NC_008596.1 hypothetical protein 6775947 4536912 MSMEG_6728 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890936.1 6775459 D 246196 CDS YP_890937.1 118471222 4533825 6776043..6776948 1 NC_008596.1 identified by match to protein family HMM PF00248; oxidoreductase YdbC 6776948 4533825 MSMEG_6730 Mycobacterium smegmatis str. MC2 155 oxidoreductase YdbC YP_890937.1 6776043 D 246196 CDS YP_890938.1 118469731 4537606 complement(6776891..6777760) 1 NC_008596.1 DNA-binding protein 6777760 4537606 MSMEG_6729 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_890938.1 6776891 R 246196 CDS YP_890939.1 118468996 4535106 6777839..6778417 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulatory protein 6778417 4535106 MSMEG_6731 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_890939.1 6777839 D 246196 CDS YP_890940.1 118473465 4534909 6778536..6779126 1 NC_008596.1 integral membrane protein 6779126 4534909 MSMEG_6732 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_890940.1 6778536 D 246196 CDS YP_890941.1 118472869 4531353 complement(6779127..6779912) 1 NC_008596.1 identified by match to protein family HMM PF00795; carbon-nitrogen hydrolase 6779912 4531353 MSMEG_6733 Mycobacterium smegmatis str. MC2 155 carbon-nitrogen hydrolase YP_890941.1 6779127 R 246196 CDS YP_890942.1 118469074 4537260 complement(6779938..6781251) 1 NC_008596.1 dibenzothiophene desulfurization enzyme A 6781251 4537260 MSMEG_6734 Mycobacterium smegmatis str. MC2 155 dibenzothiophene desulfurization enzyme A YP_890942.1 6779938 R 246196 CDS YP_890943.1 118468022 4533103 complement(6781284..6782720) 1 NC_008596.1 identified by match to protein family HMM PF00324; amino acid permease 6782720 4533103 MSMEG_6735 Mycobacterium smegmatis str. MC2 155 amino acid permease YP_890943.1 6781284 R 246196 CDS YP_890944.1 118468916 4537078 complement(6782849..6783850) 1 NC_008596.1 identified by match to protein family HMM PF00356; LacI family transcriptional regulator 6783850 4537078 MSMEG_6736 Mycobacterium smegmatis str. MC2 155 LacI family transcriptional regulator YP_890944.1 6782849 R 246196 CDS YP_890945.1 118471760 4536369 6784100..6785038 1 NC_008596.1 hypothetical protein 6785038 4536369 MSMEG_6737 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890945.1 6784100 D 246196 CDS YP_890946.1 118472597 4536875 complement(6785045..6785728) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptional regulator YdhC 6785728 4536875 MSMEG_6738 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YdhC YP_890946.1 6785045 R 246196 CDS YP_890947.1 118467670 4536936 6785888..6786334 1 NC_008596.1 hypothetical protein 6786334 4536936 MSMEG_6739 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890947.1 6785888 D 246196 CDS YP_890948.1 118467529 4535991 6786544..6787548 1 NC_008596.1 catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate; 1-aminocyclopropane-1-carboxylate deaminase 6787548 4535991 MSMEG_6740 Mycobacterium smegmatis str. MC2 155 1-aminocyclopropane-1-carboxylate deaminase YP_890948.1 6786544 D 246196 CDS YP_890949.1 118472949 4531766 complement(6787549..6788229) 1 NC_008596.1 identified by match to protein family HMM PF03861; ANTAR domain-containing protein 6788229 4531766 MSMEG_6741 Mycobacterium smegmatis str. MC2 155 ANTAR domain-containing protein YP_890949.1 6787549 R 246196 CDS YP_890950.1 118468870 4533755 complement(6788255..6788818) 1 NC_008596.1 identified by match to protein family HMM PF07336; hypothetical protein 6788818 4533755 MSMEG_6742 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890950.1 6788255 R 246196 CDS YP_890951.1 118471324 4534837 6788941..6789396 1 NC_008596.1 identified by match to protein family HMM PF00903; lactoylglutathione lyase 6789396 4534837 MSMEG_6743 Mycobacterium smegmatis str. MC2 155 lactoylglutathione lyase YP_890951.1 6788941 D 246196 CDS YP_890952.1 118469445 4534821 6789407..6790261 1 NC_008596.1 identified by match to protein family HMM PF01243; oxidoreductase FAD/NAD 6790261 4534821 MSMEG_6744 Mycobacterium smegmatis str. MC2 155 oxidoreductase FAD/NAD YP_890952.1 6789407 D 246196 CDS YP_890953.1 118469815 4532841 6790305..6791048 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07702; GntR family transcriptional regulator 6791048 4532841 MSMEG_6745 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_890953.1 6790305 D 246196 CDS YP_890954.1 118473005 4531297 complement(6791052..6792122) 1 NC_008596.1 identified by match to protein family HMM PF00248; oxidoreductase, aldo/keto reductase 6792122 4531297 MSMEG_6746 Mycobacterium smegmatis str. MC2 155 oxidoreductase, aldo/keto reductase YP_890954.1 6791052 R 246196 CDS YP_890955.1 118473657 4531228 6792281..6793198 1 NC_008596.1 identified by match to protein family HMM PF00107; oxidoreductase 6793198 4531228 MSMEG_6747 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_890955.1 6792281 D 246196 CDS YP_890956.1 118473607 4531042 complement(6793199..6794875) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATPase 6794875 4531042 MSMEG_6748 Mycobacterium smegmatis str. MC2 155 ABC transporter ATPase YP_890956.1 6793199 R 246196 CDS YP_890957.1 118470773 4531137 complement(6794909..6795121) 1 NC_008596.1 hypothetical protein 6795121 4531137 MSMEG_6749 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890957.1 6794909 R 246196 CDS YP_890958.1 118471710 4536435 complement(6795153..6795962) 1 NC_008596.1 hypothetical protein 6795962 4536435 MSMEG_6750 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890958.1 6795153 R 246196 CDS YP_890959.1 118468382 4532931 6796078..6796293 1 NC_008596.1 hypothetical protein 6796293 4532931 MSMEG_6751 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890959.1 6796078 D 246196 CDS YP_890960.1 118473587 4534860 complement(6796297..6797238) 1 NC_008596.1 identified by match to protein family HMM PF01341; endoglucanase A 6797238 4534860 MSMEG_6752 Mycobacterium smegmatis str. MC2 155 endoglucanase A YP_890960.1 6796297 R 246196 CDS YP_890961.1 118471689 4536451 6797368..6798090 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF07993; oxidoreductase, short chain dehydrogenase/reductase 6798090 4536451 MSMEG_6753 Mycobacterium smegmatis str. MC2 155 oxidoreductase, short chain dehydrogenase/reductase YP_890961.1 6797368 D 246196 CDS YP_890962.1 118471726 4536412 6798433..6799461 1 NC_008596.1 identified by match to protein family HMM PF01575; MaoC like domain-containing protein 6799461 4536412 MSMEG_6754 Mycobacterium smegmatis str. MC2 155 MaoC like domain-containing protein YP_890962.1 6798433 D 246196 CDS YP_890963.1 118470671 4531734 6799518..6800441 1 NC_008596.1 identified by match to protein family HMM PF05368; isoflavone reductase 6800441 4531734 MSMEG_6755 Mycobacterium smegmatis str. MC2 155 isoflavone reductase YP_890963.1 6799518 D 246196 CDS YP_890964.1 118469746 4532031 complement(6800466..6801983) 1 NC_008596.1 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01311; glycerol kinase 6801983 glpK 4532031 glpK Mycobacterium smegmatis str. MC2 155 glycerol kinase YP_890964.1 6800466 R 246196 CDS YP_890965.1 118472461 4533827 complement(6801980..6802741) 1 NC_008596.1 identified by match to protein family HMM PF01614; glycerol operon regulatory protein 6802741 4533827 MSMEG_6757 Mycobacterium smegmatis str. MC2 155 glycerol operon regulatory protein YP_890965.1 6801980 R 246196 CDS YP_890966.1 118471490 4531892 6802924..6803739 1 NC_008596.1 identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; transport integral membrane protein 6803739 4531892 MSMEG_6758 Mycobacterium smegmatis str. MC2 155 transport integral membrane protein YP_890966.1 6802924 D 246196 CDS YP_890967.1 118469921 4535575 6803763..6805280 1 NC_008596.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 6805280 glpK 4535575 glpK Mycobacterium smegmatis str. MC2 155 glycerol kinase YP_890967.1 6803763 D 246196 CDS YP_890968.1 118472444 4533585 6805277..6806983 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01494; glycerol-3-phosphate dehydrogenase 6806983 4533585 MSMEG_6761 Mycobacterium smegmatis str. MC2 155 glycerol-3-phosphate dehydrogenase YP_890968.1 6805277 D 246196 CDS YP_890969.1 118469298 4532637 complement(6806973..6807458) 1 NC_008596.1 hypothetical protein 6807458 4532637 MSMEG_6760 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890969.1 6806973 R 246196 CDS YP_890970.1 118473344 4532009 complement(6807460..6807807) 1 NC_008596.1 identified by match to protein family HMM PF01022; transcriptional regulator 6807807 4532009 MSMEG_6762 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_890970.1 6807460 R 246196 CDS YP_890971.1 118472544 4532671 complement(6807853..6808677) 1 NC_008596.1 identified by match to protein family HMM PF00561; oxidoreductase 6808677 4532671 MSMEG_6763 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_890971.1 6807853 R 246196 CDS YP_890972.1 118470460 4534523 6808750..6809331 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 6809331 4534523 MSMEG_6764 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_890972.1 6808750 D 246196 CDS YP_890973.1 118471373 4535280 complement(6809341..6810183) 1 NC_008596.1 identified by match to protein family HMM PF01061; ABC transporter 6810183 4535280 MSMEG_6765 Mycobacterium smegmatis str. MC2 155 ABC transporter YP_890973.1 6809341 R 246196 CDS YP_890974.1 118469443 4534819 complement(6810183..6811019) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 6811019 4534819 MSMEG_6766 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_890974.1 6810183 R 246196 CDS YP_890975.1 118468346 4533945 complement(6811016..6816496) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; mycocerosic acid synthase 6816496 4533945 MSMEG_6767 Mycobacterium smegmatis str. MC2 155 mycocerosic acid synthase YP_890975.1 6811016 R 246196 CDS YP_890976.1 118472177 4533715 complement(6816577..6818328) 1 NC_008596.1 identified by match to protein family HMM PF01266; match to protein family HMM PF04820; halogenase 6818328 4533715 MSMEG_6768 Mycobacterium smegmatis str. MC2 155 halogenase YP_890976.1 6816577 R 246196 CDS YP_890977.1 118471717 4536403 complement(6818359..6819639) 1 NC_008596.1 identified by match to protein family HMM PF00999; transporter monovalent cation:proton antiporter-2 (CPA2) family protein 6819639 4536403 MSMEG_6769 Mycobacterium smegmatis str. MC2 155 transporter monovalent cation:proton antiporter-2 (CPA2) family protein YP_890977.1 6818359 R 246196 CDS YP_890978.1 118473058 4534610 6819891..6820289 1 NC_008596.1 hypothetical protein 6820289 4534610 MSMEG_6770 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890978.1 6819891 D 246196 CDS YP_890979.1 118467758 4533389 6820316..6820858 1 NC_008596.1 hypothetical protein 6820858 4533389 MSMEG_6771 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890979.1 6820316 D 246196 CDS YP_890980.1 118470483 4537167 6820932..6821960 1 NC_008596.1 identified by match to protein family HMM PF00561; hypothetical protein 6821960 4537167 MSMEG_6772 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890980.1 6820932 D 246196 CDS YP_890981.1 118471022 4534478 6822091..6823278 1 NC_008596.1 identified by match to protein family HMM PF02515; CaiB/BaiF family protein 6823278 4534478 MSMEG_6773 Mycobacterium smegmatis str. MC2 155 CaiB/BaiF family protein YP_890981.1 6822091 D 246196 CDS YP_890982.1 118472755 4531944 6823288..6824070 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase 6824070 4531944 MSMEG_6774 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_890982.1 6823288 D 246196 CDS YP_890983.1 118467546 4536008 6824092..6825447 1 NC_008596.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily protein transporter 6825447 4536008 MSMEG_6775 Mycobacterium smegmatis str. MC2 155 major facilitator superfamily protein transporter YP_890983.1 6824092 D 246196 CDS YP_890984.1 118470363 4534638 6825514..6826359 1 NC_008596.1 identified by similarity to SP:P32064; match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 6826359 4534638 MSMEG_6776 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_890984.1 6825514 D 246196 CDS YP_890985.1 118470912 4537586 6826399..6827178 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase 6827178 4537586 MSMEG_6777 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase YP_890985.1 6826399 D 246196 CDS YP_890986.1 118470006 4532744 complement(6827190..6827630) 1 NC_008596.1 hypothetical protein 6827630 4532744 MSMEG_6778 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890986.1 6827190 R 246196 CDS YP_890987.1 118472497 4532448 complement(6827676..6828323) 1 NC_008596.1 identified by match to protein family HMM TIGR03083; hypothetical protein 6828323 4532448 MSMEG_6779 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890987.1 6827676 R 246196 CDS YP_890988.1 118468067 4533014 6828361..6829233 1 NC_008596.1 identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654; phenazine biosynthesis protein PhzF 6829233 4533014 MSMEG_6780 Mycobacterium smegmatis str. MC2 155 phenazine biosynthesis protein PhzF YP_890988.1 6828361 D 246196 CDS YP_890989.1 118468994 4535104 complement(6829246..6830718) 1 NC_008596.1 hypothetical protein 6830718 4535104 MSMEG_6781 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890989.1 6829246 R 246196 CDS YP_890990.1 118473817 4531627 6830819..6831088 1 NC_008596.1 hypothetical protein 6831088 4531627 MSMEG_6782 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890990.1 6830819 D 246196 CDS YP_890991.1 118470342 4534925 complement(6831167..6832159) 1 NC_008596.1 integral membrane protein 6832159 4534925 MSMEG_6783 Mycobacterium smegmatis str. MC2 155 integral membrane protein YP_890991.1 6831167 R 246196 CDS YP_890992.1 118470961 4534533 complement(6832219..6833286) 1 NC_008596.1 identified by match to protein family HMM PF00144; beta-lactamase 6833286 4534533 MSMEG_6784 Mycobacterium smegmatis str. MC2 155 beta-lactamase YP_890992.1 6832219 R 246196 CDS YP_890993.1 118468566 4533700 6833391..6833990 1 NC_008596.1 hypothetical protein 6833990 4533700 MSMEG_6786 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_890993.1 6833391 D 246196 CDS YP_890994.1 118473072 4533146 complement(6833969..6834760) 1 NC_008596.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 6834760 tpiA 4533146 tpiA Mycobacterium smegmatis str. MC2 155 triosephosphate isomerase YP_890994.1 6833969 R 246196 CDS YP_890995.1 118469259 4531552 complement(6834753..6835211) 1 NC_008596.1 identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR02133; ribose 5-phosphate isomerase 6835211 4531552 MSMEG_6787 Mycobacterium smegmatis str. MC2 155 ribose 5-phosphate isomerase YP_890995.1 6834753 R 246196 CDS YP_890996.1 118469941 4535852 complement(6835256..6836971) 1 NC_008596.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase 6836971 4535852 MSMEG_6788 Mycobacterium smegmatis str. MC2 155 dihydroxyacetone kinase YP_890996.1 6835256 R 246196 CDS YP_890997.1 118467714 4537722 complement(6837064..6837840) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 6837840 4537722 MSMEG_6789 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_890997.1 6837064 R 246196 CDS YP_890998.1 118468622 4535020 6838029..6838949 1 NC_008596.1 identified by match to protein family HMM PF01261; AP endonuclease, family protein 2 6838949 4535020 MSMEG_6790 Mycobacterium smegmatis str. MC2 155 AP endonuclease, family protein 2 YP_890998.1 6838029 D 246196 CDS YP_890999.1 118473862 4533563 6838975..6839937 1 NC_008596.1 identified by match to protein family HMM PF00725; match to protein family HMM PF01210; match to protein family HMM PF02737; match to protein family HMM PF03446; 3-hydroxybutyryl-CoA dehydrogenase 6839937 4533563 MSMEG_6791 Mycobacterium smegmatis str. MC2 155 3-hydroxybutyryl-CoA dehydrogenase YP_890999.1 6838975 D 246196 CDS YP_891000.1 118473340 4532005 6840005..6841405 1 NC_008596.1 identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM TIGR00791; inner membrane permease YgbN 6841405 4532005 MSMEG_6792 Mycobacterium smegmatis str. MC2 155 inner membrane permease YgbN YP_891000.1 6840005 D 246196 CDS YP_891001.1 118473387 4536632 complement(6841426..6842814) 1 NC_008596.1 hypothetical protein 6842814 4536632 MSMEG_6793 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891001.1 6841426 R 246196 CDS YP_891002.1 118468498 4537687 complement(6842901..6843767) 1 NC_008596.1 identified by match to protein family HMM PF01381; DNA-binding protein 6843767 4537687 MSMEG_6794 Mycobacterium smegmatis str. MC2 155 DNA-binding protein YP_891002.1 6842901 R 246196 CDS YP_891003.1 118470464 4536772 6843947..6844789 1 NC_008596.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase 6844789 4536772 MSMEG_6795 Mycobacterium smegmatis str. MC2 155 enoyl-CoA hydratase/isomerase YP_891003.1 6843947 D 246196 CDS YP_891004.1 118469081 4537636 6844782..6845168 1 NC_008596.1 hypothetical protein 6845168 4537636 MSMEG_6796 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891004.1 6844782 D 246196 CDS YP_891005.1 118473116 4531842 6845184..6845597 1 NC_008596.1 identified by match to protein family HMM PF02627; carboxymuconolactone decarboxylase 6845597 4531842 MSMEG_6797 Mycobacterium smegmatis str. MC2 155 carboxymuconolactone decarboxylase YP_891005.1 6845184 D 246196 CDS YP_891006.1 118467918 4532651 complement(6846555..6847553) 1 NC_008596.1 identified by similarity to SP:P25551; match to protein family HMM PF00356; match to protein family HMM PF00532; ribose operon repressor 6847553 rbsR 4532651 rbsR Mycobacterium smegmatis str. MC2 155 ribose operon repressor YP_891006.1 6846555 R 246196 CDS YP_891007.1 118469380 4532274 complement(6847550..6848200) 1 NC_008596.1 fructose transporter kinase 6848200 frcK 4532274 frcK Mycobacterium smegmatis str. MC2 155 fructose transporter kinase YP_891007.1 6847550 R 246196 CDS YP_891008.1 118469384 4532278 complement(6848197..6849126) 1 NC_008596.1 identified by match to protein family HMM PF00294; kinase, pfkB family protein 6849126 4532278 MSMEG_6801 Mycobacterium smegmatis str. MC2 155 kinase, pfkB family protein YP_891008.1 6848197 R 246196 CDS YP_891009.1 118468838 4535415 complement(6849104..6849895) 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 6849895 4535415 MSMEG_6802 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_891009.1 6849104 R 246196 CDS YP_891010.1 118473130 4531191 complement(6849892..6850911) 1 NC_008596.1 identified by match to protein family HMM PF02653; ribose transporter permease RbsC 6850911 4531191 MSMEG_6803 Mycobacterium smegmatis str. MC2 155 ribose transporter permease RbsC YP_891010.1 6849892 R 246196 CDS YP_891011.1 118470903 4537577 complement(6850913..6851911) 1 NC_008596.1 identified by match to protein family HMM PF00532; sugar ABC transporter substrate-binding protein 6851911 4537577 MSMEG_6804 Mycobacterium smegmatis str. MC2 155 sugar ABC transporter substrate-binding protein YP_891011.1 6850913 R 246196 CDS YP_891012.1 118468173 4535045 6852036..6853556 1 NC_008596.1 identified by match to protein family HMM PF00144; beta-lactamase 6853556 4535045 MSMEG_6805 Mycobacterium smegmatis str. MC2 155 beta-lactamase YP_891012.1 6852036 D 246196 CDS YP_891013.1 118470594 4531381 complement(6853636..6856158) 1 NC_008596.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630; excinuclease ABC subunit A 6856158 uvrA 4531381 uvrA Mycobacterium smegmatis str. MC2 155 excinuclease ABC subunit A YP_891013.1 6853636 R 246196 CDS YP_891014.1 118469853 4530891 complement(6856188..6856793) 1 NC_008596.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 6856793 4530891 MSMEG_6807 Mycobacterium smegmatis str. MC2 155 TetR family transcriptional regulator YP_891014.1 6856188 R 246196 CDS YP_891015.1 118471871 4536247 6856899..6858059 1 NC_008596.1 hypothetical protein 6858059 4536247 MSMEG_6808 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891015.1 6856899 D 246196 CDS YP_891016.1 118470706 4532543 6858052..6858855 1 NC_008596.1 identified by match to protein family HMM PF07728; CbbQ protein 6858855 cbbQ 4532543 cbbQ Mycobacterium smegmatis str. MC2 155 CbbQ protein YP_891016.1 6858052 D 246196 CDS YP_891017.1 118468190 4534404 complement(6860658..6861881) 1 NC_008596.1 hypothetical protein 6861881 4534404 MSMEG_6811 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891017.1 6860658 R 246196 CDS YP_891018.1 118473948 4533894 complement(6863010..6863963) 1 NC_008596.1 identified by match to protein family HMM PF04909; amidohydrolase 6863963 4533894 MSMEG_6813 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_891018.1 6863010 R 246196 CDS YP_891019.1 118468254 4533987 6864069..6864503 1 NC_008596.1 identified by match to protein family HMM PF01047; Fis family transcriptional regulator 6864503 4533987 MSMEG_6814 Mycobacterium smegmatis str. MC2 155 Fis family transcriptional regulator YP_891019.1 6864069 D 246196 CDS YP_891020.1 118473869 4531117 6864557..6865342 1 NC_008596.1 identified by match to protein family HMM TIGR01409; hypothetical protein 6865342 4531117 MSMEG_6815 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891020.1 6864557 D 246196 CDS YP_891021.1 118471125 4533484 6865435..6867597 1 NC_008596.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; molybdopterin oxidoreductase 6867597 4533484 MSMEG_6816 Mycobacterium smegmatis str. MC2 155 molybdopterin oxidoreductase YP_891021.1 6865435 D 246196 CDS YP_891022.1 118471900 4536237 complement(6867601..6868491) 1 NC_008596.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; igma-70 family RNA polymerase sigma factor 6868491 4536237 MSMEG_6817 Mycobacterium smegmatis str. MC2 155 igma-70 family RNA polymerase sigma factor YP_891022.1 6867601 R 246196 CDS YP_891023.1 118467473 4536990 complement(6868472..6869674) 1 NC_008596.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; dehydrogenase 6869674 4536990 MSMEG_6818 Mycobacterium smegmatis str. MC2 155 dehydrogenase YP_891023.1 6868472 R 246196 CDS YP_891024.1 118471579 4534441 6870741..6871520 1 NC_008596.1 identified by match to protein family HMM PF01975; match to protein family HMM TIGR00087; acid phosphatase SurE 6871520 surE 4534441 surE Mycobacterium smegmatis str. MC2 155 acid phosphatase SurE YP_891024.1 6870741 D 246196 CDS YP_891025.1 118469760 4532824 complement(6871529..6872626) 1 NC_008596.1 NLP/P60 family protein 6872626 4532824 MSMEG_6821 Mycobacterium smegmatis str. MC2 155 NLP/P60 family protein YP_891025.1 6871529 R 246196 CDS YP_891026.1 118469316 4533381 6872926..6873837 1 NC_008596.1 identified by match to protein family HMM PF00144; beta-lactamase 6873837 4533381 MSMEG_6822 Mycobacterium smegmatis str. MC2 155 beta-lactamase YP_891026.1 6872926 D 246196 CDS YP_891027.1 118471716 4536402 complement(6873845..6874579) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short-chain dehydrogenase/reductase SDR 6874579 4536402 MSMEG_6823 Mycobacterium smegmatis str. MC2 155 short-chain dehydrogenase/reductase SDR YP_891027.1 6873845 R 246196 CDS YP_891028.1 118473210 4531060 complement(6874761..6875474) 1 NC_008596.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 6875474 4531060 MSMEG_6824 Mycobacterium smegmatis str. MC2 155 MarR family transcriptional regulator YP_891028.1 6874761 R 246196 CDS YP_891029.1 118473581 4534854 6875373..6876185 1 NC_008596.1 identified by match to protein family HMM PF02517; caax amino protease 6876185 4534854 MSMEG_6825 Mycobacterium smegmatis str. MC2 155 caax amino protease YP_891029.1 6875373 D 246196 CDS YP_891030.1 118468396 4534785 6876287..6877969 1 NC_008596.1 identified by match to protein family HMM PF02652; match to protein family HMM TIGR00795; L-lactate permease 6877969 4534785 MSMEG_6826 Mycobacterium smegmatis str. MC2 155 L-lactate permease YP_891030.1 6876287 D 246196 CDS YP_891031.1 118472156 4535682 complement(6877979..6878119) 1 NC_008596.1 hypothetical protein 6878119 4535682 MSMEG_6827 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891031.1 6877979 R 246196 CDS YP_891032.1 118473282 4535544 complement(6878097..6880826) 1 NC_008596.1 identified by match to protein family HMM PF00196; transcriptional regulator 6880826 4535544 MSMEG_6828 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_891032.1 6878097 R 246196 CDS YP_891033.1 118471855 4536270 6880885..6881337 1 NC_008596.1 identified by match to protein family HMM PF01638; transcriptional regulatory protein 6881337 4536270 MSMEG_6829 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_891033.1 6880885 D 246196 CDS YP_891034.1 118471056 4537129 6881399..6882127 1 NC_008596.1 hypothetical protein 6882127 4537129 MSMEG_6830 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891034.1 6881399 D 246196 CDS YP_891035.1 118469535 4537109 complement(6882131..6882982) 1 NC_008596.1 identified by match to protein family HMM PF00561; hydrolase, alpha/beta hydrolase fold family protein 6882982 4537109 MSMEG_6831 Mycobacterium smegmatis str. MC2 155 hydrolase, alpha/beta hydrolase fold family protein YP_891035.1 6882131 R 246196 CDS YP_891036.1 118468028 4531385 complement(6883001..6883624) 1 NC_008596.1 identified by match to protein family HMM TIGR03083; match to protein family HMM TIGR03086; hypothetical protein 6883624 4531385 MSMEG_6832 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891036.1 6883001 R 246196 CDS YP_891037.1 118470700 4532537 6883673..6884752 1 NC_008596.1 identified by match to protein family HMM PF00107; alcohol dehydrogenase 6884752 4532537 MSMEG_6833 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_891037.1 6883673 D 246196 CDS YP_891038.1 118471709 4536434 6884787..6885815 1 NC_008596.1 identified by match to protein family HMM PF00107; alcohol dehydrogenase 6885815 4536434 MSMEG_6834 Mycobacterium smegmatis str. MC2 155 alcohol dehydrogenase YP_891038.1 6884787 D 246196 CDS YP_891039.1 118472744 4531933 complement(6885835..6887229) 1 NC_008596.1 identified by match to protein family HMM PF00487; Fatty acid desaturase 6887229 4531933 MSMEG_6835 Mycobacterium smegmatis str. MC2 155 Fatty acid desaturase YP_891039.1 6885835 R 246196 CDS YP_891040.1 118473451 4534895 complement(6887256..6887666) 1 NC_008596.1 identified by match to protein family HMM PF00111; oxidoreductase 6887666 4534895 MSMEG_6836 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_891040.1 6887256 R 246196 CDS YP_891041.1 118470160 4534338 6887818..6888333 1 NC_008596.1 esterase 6888333 4534338 MSMEG_6838 Mycobacterium smegmatis str. MC2 155 esterase YP_891041.1 6887818 D 246196 CDS YP_891042.1 118472095 4537476 complement(6888294..6889229) 1 NC_008596.1 catalyzes the cleavage of carbon-halogen bonds in aliphatic compounds forming a primary alcohol and a halide; haloalkane dehalogenase 6889229 4537476 MSMEG_6837 Mycobacterium smegmatis str. MC2 155 haloalkane dehalogenase YP_891042.1 6888294 R 246196 CDS YP_891043.1 118473856 4533556 6889400..6890398 1 NC_008596.1 identified by match to protein family HMM PF00165; match to protein family HMM PF01965; AraC family transcriptional regulator 6890398 4533556 MSMEG_6839 Mycobacterium smegmatis str. MC2 155 AraC family transcriptional regulator YP_891043.1 6889400 D 246196 CDS YP_891044.1 118471839 4536293 complement(6890416..6891297) 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 6891297 4536293 MSMEG_6840 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_891044.1 6890416 R 246196 CDS YP_891045.1 118472432 4532049 complement(6891315..6891446) 1 NC_008596.1 hypothetical protein 6891446 4532049 MSMEG_6841 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891045.1 6891315 R 246196 CDS YP_891046.1 118472522 4534720 6891408..6892730 1 NC_008596.1 identified by match to protein family HMM PF00202; 2,2-dialkylglycine decarboxylase 6892730 4534720 MSMEG_6842 Mycobacterium smegmatis str. MC2 155 2,2-dialkylglycine decarboxylase YP_891046.1 6891408 D 246196 CDS YP_891047.1 118472518 4533748 complement(6892736..6893557) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase 6893557 4533748 MSMEG_6843 Mycobacterium smegmatis str. MC2 155 NAD-dependent epimerase/dehydratase YP_891047.1 6892736 R 246196 CDS YP_891048.1 118470666 4534675 complement(6893571..6894623) 1 NC_008596.1 identified by match to protein family HMM PF03480; match to protein family HMM TIGR00787; match to protein family HMM TIGR01409; trap-t family protein transporter dctp 6894623 4534675 MSMEG_6844 Mycobacterium smegmatis str. MC2 155 trap-t family protein transporter dctp YP_891048.1 6893571 R 246196 CDS YP_891049.1 118468001 4531321 complement(6894636..6895931) 1 NC_008596.1 identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786; trap dicarboxylate transporter dctm subunit 6895931 4531321 MSMEG_6845 Mycobacterium smegmatis str. MC2 155 trap dicarboxylate transporter dctm subunit YP_891049.1 6894636 R 246196 CDS YP_891050.1 118473476 4531179 complement(6895944..6896453) 1 NC_008596.1 identified by match to protein family HMM PF04290; C4 decarboxylate transporter 6896453 4531179 MSMEG_6846 Mycobacterium smegmatis str. MC2 155 C4 decarboxylate transporter YP_891050.1 6895944 R 246196 CDS YP_891051.1 118471958 4536182 complement(6896461..6897615) 1 NC_008596.1 hypothetical protein 6897615 4536182 MSMEG_6847 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891051.1 6896461 R 246196 CDS YP_891052.1 118473071 4533145 complement(6897798..6899045) 1 NC_008596.1 identified by match to protein family HMM PF01243; oxidoreductase 6899045 4533145 MSMEG_6848 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_891052.1 6897798 R 246196 CDS YP_891053.1 118472543 4532670 complement(6899091..6900023) 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 6900023 4532670 MSMEG_6849 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_891053.1 6899091 R 246196 CDS YP_891054.1 118470536 4536128 6900106..6900822 1 NC_008596.1 alpha/beta hydrolase 6900822 4536128 MSMEG_6850 Mycobacterium smegmatis str. MC2 155 alpha/beta hydrolase YP_891054.1 6900106 D 246196 CDS YP_891055.1 118469825 4532851 6900861..6901784 1 NC_008596.1 identified by match to protein family HMM PF07859; carboxylesterase/lipase 6901784 4532851 MSMEG_6852 Mycobacterium smegmatis str. MC2 155 carboxylesterase/lipase YP_891055.1 6900861 D 246196 CDS YP_891056.1 118470905 4537579 complement(6901769..6902308) 1 NC_008596.1 identified by match to protein family HMM PF01161; phosphatidylethanolamine-binding protein 6902308 4537579 MSMEG_6851 Mycobacterium smegmatis str. MC2 155 phosphatidylethanolamine-binding protein YP_891056.1 6901769 R 246196 CDS YP_891057.1 118473696 4533244 complement(6902305..6902853) 1 NC_008596.1 identified by match to protein family HMM PF00694; match to protein family HMM TIGR02087; 3-isopropylmalate dehydratase small subunit 6902853 4533244 MSMEG_6853 Mycobacterium smegmatis str. MC2 155 3-isopropylmalate dehydratase small subunit YP_891057.1 6902305 R 246196 CDS YP_891058.1 118469631 4534091 complement(6902850..6904118) 1 NC_008596.1 identified by match to protein family HMM PF00330; match to protein family HMM TIGR01343; 3-isopropylmalate dehydratase large subunit 6904118 4534091 MSMEG_6854 Mycobacterium smegmatis str. MC2 155 3-isopropylmalate dehydratase large subunit YP_891058.1 6902850 R 246196 CDS YP_891059.1 118468771 4535662 complement(6904120..6905010) 1 NC_008596.1 carboxyvinyl-carboxyphosphonate phosphorylmutase 6905010 4535662 MSMEG_6855 Mycobacterium smegmatis str. MC2 155 carboxyvinyl-carboxyphosphonate phosphorylmutase YP_891059.1 6904120 R 246196 CDS YP_891060.1 118473159 4532600 complement(6905010..6906443) 1 NC_008596.1 identified by match to protein family HMM PF03972; MmgE/PrpD family protein 6906443 4532600 MSMEG_6856 Mycobacterium smegmatis str. MC2 155 MmgE/PrpD family protein YP_891060.1 6905010 R 246196 CDS YP_891061.1 118472439 4532056 6906505..6907275 1 NC_008596.1 identified by match to protein family HMM PF01614; transcriptional regulator 6907275 4532056 MSMEG_6857 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_891061.1 6906505 D 246196 CDS YP_891062.1 118471853 4536268 complement(6907277..6908395) 1 NC_008596.1 identified by match to protein family HMM PF00561; match to protein family HMM PF06441; epoxide hydrolase 1 6908395 4536268 MSMEG_6858 Mycobacterium smegmatis str. MC2 155 epoxide hydrolase 1 YP_891062.1 6907277 R 246196 CDS YP_891063.1 118470861 4536793 complement(6908449..6909201) 1 NC_008596.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; oxidoreductase 6909201 4536793 MSMEG_6859 Mycobacterium smegmatis str. MC2 155 oxidoreductase YP_891063.1 6908449 R 246196 CDS YP_891064.1 118467930 4533409 complement(6909291..6909740) 1 NC_008596.1 hypothetical protein 6909740 4533409 MSMEG_6860 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891064.1 6909291 R 246196 CDS YP_891065.1 118473907 4536973 complement(6909812..6910366) 1 NC_008596.1 identified by match to protein family HMM PF07883; cupin 6910366 4536973 MSMEG_6861 Mycobacterium smegmatis str. MC2 155 cupin YP_891065.1 6909812 R 246196 CDS YP_891066.1 118472877 4531361 6910524..6911108 1 NC_008596.1 identified by match to protein family HMM PF00440; transcriptional regulator 6911108 4531361 MSMEG_6862 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_891066.1 6910524 D 246196 CDS YP_891067.1 118470015 4532753 6911105..6911872 1 NC_008596.1 identified by match to protein family HMM PF00596; aldolase 6911872 4532753 MSMEG_6863 Mycobacterium smegmatis str. MC2 155 aldolase YP_891067.1 6911105 D 246196 CDS YP_891068.1 118468576 4532703 complement(6912063..6912752) 1 NC_008596.1 transcriptional regulator 6912752 4532703 MSMEG_6864 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_891068.1 6912063 R 246196 CDS YP_891069.1 118467864 4532886 6912890..6914365 1 NC_008596.1 identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409; ABC transporter substrate-binding protein 6914365 4532886 MSMEG_6865 Mycobacterium smegmatis str. MC2 155 ABC transporter substrate-binding protein YP_891069.1 6912890 D 246196 CDS YP_891070.1 118469875 4536567 6914358..6915356 1 NC_008596.1 identified by match to protein family HMM PF00528; peptide ABC transporter permease 6915356 4536567 MSMEG_6866 Mycobacterium smegmatis str. MC2 155 peptide ABC transporter permease YP_891070.1 6914358 D 246196 CDS YP_891071.1 118469155 4534741 6915356..6916180 1 NC_008596.1 identified by match to protein family HMM PF00528; oligopeptide ABC transporter integral membrane protein 6916180 4534741 MSMEG_6867 Mycobacterium smegmatis str. MC2 155 oligopeptide ABC transporter integral membrane protein YP_891071.1 6915356 D 246196 CDS YP_891072.1 118473509 4533871 complement(6917828..6918790) 1 NC_008596.1 identified by match to protein family HMM PF00480; regulatory protein 6918790 4533871 MSMEG_6869 Mycobacterium smegmatis str. MC2 155 regulatory protein YP_891072.1 6917828 R 246196 CDS YP_891073.1 118469315 4533380 6918823..6919647 1 NC_008596.1 identified by match to protein family HMM PF02633; creatinine amidohydrolase 6919647 4533380 MSMEG_6870 Mycobacterium smegmatis str. MC2 155 creatinine amidohydrolase YP_891073.1 6918823 D 246196 CDS YP_891074.1 118471144 4531831 6919644..6920771 1 NC_008596.1 identified by match to protein family HMM PF01188; match to protein family HMM PF02746; isomerase 6920771 4531831 MSMEG_6871 Mycobacterium smegmatis str. MC2 155 isomerase YP_891074.1 6919644 D 246196 CDS YP_891075.1 118469428 4534324 6920768..6921817 1 NC_008596.1 identified by match to protein family HMM PF00144; beta-lactamase 6921817 4534324 MSMEG_6872 Mycobacterium smegmatis str. MC2 155 beta-lactamase YP_891075.1 6920768 D 246196 CDS YP_891076.1 118471504 4536843 complement(6922554..6924056) 1 NC_008596.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 6924056 4536843 MSMEG_6874 Mycobacterium smegmatis str. MC2 155 aldehyde dehydrogenase YP_891076.1 6922554 R 246196 CDS YP_891077.1 118472844 4537440 complement(6924099..6925229) 1 NC_008596.1 identified by match to protein family HMM PF01042; endoribonuclease L-PSP family protein 6925229 4537440 MSMEG_6875 Mycobacterium smegmatis str. MC2 155 endoribonuclease L-PSP family protein YP_891077.1 6924099 R 246196 CDS YP_891078.1 118467742 4535641 complement(6925321..6926043) 1 NC_008596.1 identified by match to protein family HMM PF00005; branched chain amino acid transport ATP-binding protein 6926043 4535641 MSMEG_6876 Mycobacterium smegmatis str. MC2 155 branched chain amino acid transport ATP-binding protein YP_891078.1 6925321 R 246196 CDS YP_891079.1 118469660 4535422 complement(6926040..6926819) 1 NC_008596.1 identified by match to protein family HMM PF00005; branched-chain amino acid transporter ATP-binding protein 6926819 4535422 MSMEG_6877 Mycobacterium smegmatis str. MC2 155 branched-chain amino acid transporter ATP-binding protein YP_891079.1 6926040 R 246196 CDS YP_891080.1 118470027 4531642 complement(6926816..6927790) 1 NC_008596.1 identified by match to protein family HMM PF02653; inner-membrane translocator 6927790 4531642 MSMEG_6878 Mycobacterium smegmatis str. MC2 155 inner-membrane translocator YP_891080.1 6926816 R 246196 CDS YP_891081.1 118471299 4532193 complement(6927790..6928701) 1 NC_008596.1 identified by match to protein family HMM PF02653; integral membrane protein NatD 6928701 4532193 MSMEG_6879 Mycobacterium smegmatis str. MC2 155 integral membrane protein NatD YP_891081.1 6927790 R 246196 CDS YP_891082.1 118469830 4532721 complement(6928729..6930018) 1 NC_008596.1 identified by match to protein family HMM PF01094; hydrophobic amino acid ABC transporter 6930018 4532721 MSMEG_6880 Mycobacterium smegmatis str. MC2 155 hydrophobic amino acid ABC transporter YP_891082.1 6928729 R 246196 CDS YP_891083.1 118470065 4535958 complement(6930093..6930722) 1 NC_008596.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 6930722 4535958 MSMEG_6881 Mycobacterium smegmatis str. MC2 155 GntR family transcriptional regulator YP_891083.1 6930093 R 246196 CDS YP_891084.1 118469111 4535304 complement(6931229..6932188) 1 NC_008596.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 6932188 4535304 MSMEG_6882 Mycobacterium smegmatis str. MC2 155 LysR family transcriptional regulator YP_891084.1 6931229 R 246196 CDS YP_891085.1 118473114 4531840 6932415..6932957 1 NC_008596.1 identified by match to protein family HMM PF03807; NADP oxidoreductase, coenzyme f420-dependent:6-phosphogluconate dehydrogenase, NAD-binding 6932957 4531840 MSMEG_6884 Mycobacterium smegmatis str. MC2 155 NADP oxidoreductase, coenzyme f420-dependent:6-phosphogluconate dehydrogenase, NAD-binding YP_891085.1 6932415 D 246196 CDS YP_891086.1 118474053 4531773 6933023..6933847 1 NC_008596.1 MmcI protein 6933847 4531773 MSMEG_6885 Mycobacterium smegmatis str. MC2 155 MmcI protein YP_891086.1 6933023 D 246196 CDS YP_891087.1 118471967 4536152 complement(6933892..6934254) 1 NC_008596.1 identified by match to protein family HMM PF01638; transcriptional regulator 6934254 4536152 MSMEG_6886 Mycobacterium smegmatis str. MC2 155 transcriptional regulator YP_891087.1 6933892 R 246196 CDS YP_891088.1 118469992 4533115 6934366..6935613 1 NC_008596.1 identified by match to protein family HMM PF01979; match to protein family HMM PF07969; amidohydrolase 6935613 4533115 MSMEG_6887 Mycobacterium smegmatis str. MC2 155 amidohydrolase YP_891088.1 6934366 D 246196 CDS YP_891089.1 118473875 4531123 complement(6935806..6936627) 1 NC_008596.1 identified by match to protein family HMM PF00665; transposase subunit 6936627 4531123 MSMEG_6888 Mycobacterium smegmatis str. MC2 155 transposase subunit YP_891089.1 6935806 R 246196 CDS YP_891090.1 118467876 4535250 complement(6936660..6936968) 1 NC_008596.1 identified by match to protein family HMM PF01527; transposase 6936968 4535250 MSMEG_6889 Mycobacterium smegmatis str. MC2 155 transposase YP_891090.1 6936660 R 246196 CDS YP_891091.1 118471611 4536523 6937052..6937345 1 NC_008596.1 identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase domain-containing protein 6937345 4536523 MSMEG_6890 Mycobacterium smegmatis str. MC2 155 antibiotic biosynthesis monooxygenase domain-containing protein YP_891091.1 6937052 D 246196 CDS YP_891092.1 118473168 4532570 complement(6937984..6941058) 1 NC_008596.1 identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR01443; match to protein family HMM TIGR01445; replicative DNA helicase 6941058 4532570 MSMEG_6892 Mycobacterium smegmatis str. MC2 155 replicative DNA helicase YP_891092.1 6937984 R 246196 CDS YP_891093.1 118468658 4535234 6941041..6941307 1 NC_008596.1 hypothetical protein 6941307 4535234 MSMEG_6893 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891093.1 6941041 D 246196 CDS YP_891094.1 118473966 4533037 complement(6941588..6942043) 1 NC_008596.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 6942043 rplI 4533037 rplI Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L9 YP_891094.1 6941588 R 246196 CDS YP_891095.1 118470101 4534936 complement(6942062..6942316) 1 NC_008596.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 6942316 rpsR 4534936 rpsR Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S18 YP_891095.1 6942062 R 246196 CDS YP_891096.1 118469435 4534331 complement(6942354..6942851) 1 NC_008596.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 6942851 4534331 MSMEG_6896 Mycobacterium smegmatis str. MC2 155 single-stranded DNA-binding protein YP_891096.1 6942354 R 246196 CDS YP_891097.1 118470162 4534340 complement(6942924..6943196) 1 NC_008596.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 6943196 rpsF 4534340 rpsF Mycobacterium smegmatis str. MC2 155 30S ribosomal protein S6 YP_891097.1 6942924 R 246196 CDS YP_891098.1 118473219 4531069 complement(6943613..6944188) 1 NC_008596.1 hypothetical protein 6944188 4531069 MSMEG_6898 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891098.1 6943613 R 246196 CDS YP_891099.1 118474015 4533428 complement(6943954..6945618) 1 NC_008596.1 hypothetical protein 6945618 4533428 MSMEG_6899 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891099.1 6943954 R 246196 CDS YP_891100.1 118468456 4536904 complement(6945615..6947972) 1 NC_008596.1 identified by match to protein family HMM PF00905; match to protein family HMM PF00912; penicillin-binding protein 1 6947972 4536904 MSMEG_6900 Mycobacterium smegmatis str. MC2 155 penicillin-binding protein 1 YP_891100.1 6945615 R 246196 CDS YP_891101.1 118468284 4535771 complement(6948091..6948579) 1 NC_008596.1 hypothetical protein 6948579 4535771 MSMEG_6901 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891101.1 6948091 R 246196 CDS YP_891102.1 118472468 4533834 6948592..6949461 1 NC_008596.1 identified by match to protein family HMM PF08044; hypothetical protein 6949461 4533834 MSMEG_6902 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891102.1 6948592 D 246196 CDS YP_891103.1 118471327 4534840 6949596..6950150 1 NC_008596.1 identified by match to protein family HMM PF03551; PadR family transcriptional regulator 6950150 4534840 MSMEG_6903 Mycobacterium smegmatis str. MC2 155 PadR family transcriptional regulator YP_891103.1 6949596 D 246196 CDS YP_891104.1 118470644 4532403 6950228..6951319 1 NC_008596.1 identified by match to protein family HMM PF01658; match to protein family HMM PF07994; myo-inositol-1-phosphate synthase 6951319 4532403 MSMEG_6904 Mycobacterium smegmatis str. MC2 155 myo-inositol-1-phosphate synthase YP_891104.1 6950228 D 246196 CDS YP_891105.1 118469247 4531539 6951391..6952305 1 NC_008596.1 identified by match to protein family HMM PF00561; hydrolase 6952305 4531539 MSMEG_6906 Mycobacterium smegmatis str. MC2 155 hydrolase YP_891105.1 6951391 D 246196 CDS YP_891106.1 118468799 4535317 6952349..6953122 1 NC_008596.1 MmcI protein 6953122 4535317 MSMEG_6907 Mycobacterium smegmatis str. MC2 155 MmcI protein YP_891106.1 6952349 D 246196 CDS YP_891107.1 118470251 4536770 6953210..6953875 1 NC_008596.1 identified by match to protein family HMM PF00392; HTH-type transcriptional regulator 6953875 4536770 MSMEG_6908 Mycobacterium smegmatis str. MC2 155 HTH-type transcriptional regulator YP_891107.1 6953210 D 246196 CDS YP_891108.1 118469698 4537203 6953922..6955694 1 NC_008596.1 identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter permease 6955694 4537203 MSMEG_6909 Mycobacterium smegmatis str. MC2 155 amino acid ABC transporter permease YP_891108.1 6953922 D 246196 CDS YP_891109.1 118471659 4536496 6955694..6956431 1 NC_008596.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 6956431 4536496 MSMEG_6911 Mycobacterium smegmatis str. MC2 155 ABC transporter ATP-binding protein YP_891109.1 6955694 D 246196 CDS YP_891110.1 118472435 4532052 6956496..6956996 1 NC_008596.1 identified by match to protein family HMM PF01047; transcriptional regulatory protein 6956996 4532052 MSMEG_6913 Mycobacterium smegmatis str. MC2 155 transcriptional regulatory protein YP_891110.1 6956496 D 246196 CDS YP_891111.1 118473449 4534893 complement(6957005..6958345) 1 NC_008596.1 hypothetical protein 6958345 4534893 MSMEG_6914 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891111.1 6957005 R 246196 CDS YP_891112.1 118468460 4537281 6958400..6959065 1 NC_008596.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 6959065 4537281 MSMEG_6916 Mycobacterium smegmatis str. MC2 155 short chain dehydrogenase YP_891112.1 6958400 D 246196 CDS YP_891113.1 118469201 4535790 complement(6959072..6961933) 1 NC_008596.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 6961933 leuS 4535790 leuS Mycobacterium smegmatis str. MC2 155 leucyl-tRNA synthetase YP_891113.1 6959072 R 246196 CDS YP_891114.1 118471835 4536289 6962147..6963091 1 NC_008596.1 hypothetical protein 6963091 4536289 MSMEG_6919 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891114.1 6962147 D 246196 CDS YP_891115.1 118473301 4535172 6963161..6963529 1 NC_008596.1 hypothetical protein 6963529 4535172 MSMEG_6920 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891115.1 6963161 D 246196 CDS YP_891116.1 118472576 4534355 complement(6963530..6964135) 1 NC_008596.1 identified by match to protein family HMM PF02622; hypothetical protein 6964135 4534355 MSMEG_6921 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891116.1 6963530 R 246196 CDS YP_891117.1 118468156 4532699 6964262..6965557 1 NC_008596.1 identified by match to protein family HMM PF07690; transporter major facilitator family protein 6965557 4532699 MSMEG_6922 Mycobacterium smegmatis str. MC2 155 transporter major facilitator family protein YP_891117.1 6964262 D 246196 CDS YP_891118.1 118469385 4532279 6965572..6966345 1 NC_008596.1 identified by match to protein family HMM TIGR03083; match to protein family HMM TIGR03084; hypothetical protein 6966345 4532279 MSMEG_6923 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891118.1 6965572 D 246196 CDS YP_891119.1 118471202 4531496 complement(6966439..6966936) 1 NC_008596.1 hypothetical protein 6966936 4531496 MSMEG_6925 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891119.1 6966439 R 246196 CDS YP_891120.1 118471508 4536847 complement(6966955..6968397) 1 NC_008596.1 identified by match to protein family HMM PF01743; match to protein family HMM PF01966; match to protein family HMM TIGR00277; match to protein family HMM TIGR02692; tRNA adenylyltransferase 6968397 4536847 MSMEG_6926 Mycobacterium smegmatis str. MC2 155 tRNA adenylyltransferase YP_891120.1 6966955 R 246196 CDS YP_891121.1 118473634 4531030 6968482..6969375 1 NC_008596.1 identified by match to protein family HMM PF00293; MutT/nudix family protein 6969375 4531030 MSMEG_6927 Mycobacterium smegmatis str. MC2 155 MutT/nudix family protein YP_891121.1 6968482 D 246196 CDS YP_891122.1 118472256 4531565 6969396..6971798 1 NC_008596.1 hypothetical protein 6971798 4531565 MSMEG_6928 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891122.1 6969396 D 246196 CDS YP_891123.1 118467992 4531312 6971795..6975445 1 NC_008596.1 identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695; hypothetical protein 6975445 4531312 MSMEG_6929 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891123.1 6971795 D 246196 CDS YP_891124.1 118469491 4534465 6975546..6976172 1 NC_008596.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase sigma-70 factor 6976172 4534465 MSMEG_6931 Mycobacterium smegmatis str. MC2 155 RNA polymerase sigma-70 factor YP_891124.1 6975546 D 246196 CDS YP_891125.1 118469156 4534742 complement(6976060..6976977) 1 NC_008596.1 hypothetical protein 6976977 4534742 MSMEG_6930 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891125.1 6976060 R 246196 CDS YP_891126.1 118470542 4532996 6976123..6976860 1 NC_008596.1 hypothetical protein 6976860 4532996 MSMEG_6932 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891126.1 6976123 D 246196 CDS YP_891127.1 118473970 4533041 6976965..6977900 1 NC_008596.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase 6977900 trxB 4533041 trxB Mycobacterium smegmatis str. MC2 155 thioredoxin-disulfide reductase YP_891127.1 6976965 D 246196 CDS YP_891128.1 118473002 4531294 6977934..6978266 1 NC_008596.1 identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 6978266 trx 4531294 trx Mycobacterium smegmatis str. MC2 155 thioredoxin YP_891128.1 6977934 D 246196 CDS YP_891129.1 118470140 4531699 6978405..6979595 1 NC_008596.1 identified by match to protein family HMM PF01471; match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase 6979595 4531699 MSMEG_6935 Mycobacterium smegmatis str. MC2 155 N-acetylmuramoyl-L-alanine amidase YP_891129.1 6978405 D 246196 CDS YP_891130.1 118469409 4531962 complement(6979641..6980393) 1 NC_008596.1 hypothetical protein 6980393 4531962 MSMEG_6936 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891130.1 6979641 R 246196 CDS YP_891131.1 118471491 4531893 complement(6980632..6981687) 1 NC_008596.1 identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; ParB-like partition proteins 6981687 4531893 MSMEG_6938 Mycobacterium smegmatis str. MC2 155 ParB-like partition proteins YP_891131.1 6980632 R 246196 CDS YP_891132.1 118472781 4531872 complement(6981747..6982718) 1 NC_008596.1 identified by match to protein family HMM PF01656; Soj family protein 6982718 4531872 MSMEG_6939 Mycobacterium smegmatis str. MC2 155 Soj family protein YP_891132.1 6981747 R 246196 CDS YP_891133.1 118471658 4536495 complement(6982721..6983428) 1 NC_008596.1 identified by match to protein family HMM PF02527; match to protein family HMM TIGR00138; methyltransferase GidB 6983428 gidB 4536495 gidB Mycobacterium smegmatis str. MC2 155 methyltransferase GidB YP_891133.1 6982721 R 246196 CDS YP_891134.1 118471352 4533236 complement(6983492..6984043) 1 NC_008596.1 identified by match to protein family HMM PF01424; R3H domain-containing protein 6984043 4533236 MSMEG_6941 Mycobacterium smegmatis str. MC2 155 R3H domain-containing protein YP_891134.1 6983492 R 246196 CDS YP_891135.1 118472161 4535687 complement(6984079..6985182) 1 NC_008596.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 6985182 4535687 MSMEG_6942 Mycobacterium smegmatis str. MC2 155 inner membrane protein translocase component YidC YP_891135.1 6984079 R 246196 CDS YP_891136.1 118469284 4532254 complement(6985175..6985522) 1 NC_008596.1 identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein 6985522 4532254 MSMEG_6944 Mycobacterium smegmatis str. MC2 155 hypothetical protein YP_891136.1 6985175 R 246196 CDS YP_891137.1 118472073 4536713 complement(6985519..6985890) 1 NC_008596.1 identified by match to protein family HMM PF00825; match to protein family HMM TIGR00188; ribonuclease P protein component 6985890 rnpA 4536713 rnpA Mycobacterium smegmatis str. MC2 155 ribonuclease P protein component YP_891137.1 6985519 R 246196 CDS YP_891138.1 118469420 4534316 complement(6985943..6986086) 1 NC_008596.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 6986086 rpmH 4534316 rpmH Mycobacterium smegmatis str. MC2 155 50S ribosomal protein L34 YP_891138.1 6985943 R 246196 CDS YP_891139.1 118474040 4531721 6986600..6988114 1 NC_008596.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 6988114 dnaA 4531721 dnaA Mycobacterium smegmatis str. MC2 155 chromosomal replication initiation protein YP_891139.1 6986600 D 246196 CDS