-- dump date 20140619_153729 -- class Genbank::Gene -- table gene_note -- id note 4537201 ferric enterobactin transporter permease FepG; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF01032 4537354 glucose-methanol-choline oxidoreductase; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error 4537599 This gene is disrupted by an IS1549 element.; IS1549, transposase, interruption-C; identified by similarity to GB:AAC38260.1 4536155 This gene is disrupted by an IS1549 element.; IS1549, transposase, interruption-N; identified by similarity to GP:2935133; match to protein family HMM PF01609 4535937 aminoglycoside phosphotransferase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF03881 4532173 SAM-dependent methyltransferase; this gene contains a frame shift which is not the result of sequencing error 4531684 glyoxylase; this gene contains a frame shift which is not the result of sequencing error 4532358 glycerol dehydratase reactivase chain A, ; this gene contains a frame shift which is not the result of sequencing error 4533681 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4535147 sulfatase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00884 4536500 hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by Glimmer2 4534061 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4530846 RemQ protein; this gene contains a frame shift which is not the result of sequencing error 4537639 flavin-dependent oxidoreductase; this gene contains a frame shift which is not the result of sequencing error 4536915 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4534869 hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by Glimmer2 4533029 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4532667 This is the transposed copy of the gene fragment that was disrupted by an IS1096 element elsewhere in the chromosome.; conserved hypothetical protein, interruption-N; identified by similarity to OMNI:NTL02MT01721 4535255 protein NrdI; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF07972 4536467 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4531763 monooxygenase, NtaA/SnaA/SoxA family; this gene contains a frame shift which is not the result of sequencing error 4531110 cytochrome C oxidase subunit I; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00115; match to protein family HMM TIGR02891 4532104 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4534364 oligopeptide ABC transporter ATP-binding protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00005 4534723 phthiodiolone ketoreductase; this gene contains a frame shift which is not the result of sequencing error 4533522 transporter; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error 4537512 ABC transporter permease; this gene contains a frame shift which is not the result of sequencing error 4534562 ribosylglycohydrolase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00782 4537120 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4536786 elongation factor G; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00009; match to protein family HMM TIGR00231 4534360 Na(+)/H(+) antiporter; this gene contains a frame shift which is not the result of sequencing error 4534116 arginine/ornithine antiporter; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error 4535916 fasciclin domain protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF02469 4532954 glycerol dehydratase reactivation factor large subunit; this gene contains a frame shift which is not the result of sequencing error 4532038 conserved hypothetical protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to RF:NP854757.1 4531717 conserved hypothetical alanine and proline rich protein; this gene contains a frame shift which is not the result of sequencing error 4536430 beta-phosphoglucomutase hydrolase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR02009 4535579 hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by Glimmer2 4533294 IS110 family transposase, truncation; identified by similarity to OMNI:MT3430 4535824 This gene is disrupted by an IS element.; IS3 family element, transposase orfB, interruption-N; identified by similarity to GP:15619023 4533545 This gene is disrupted by an IS element.; IS3 family element, transposase orfB, interruption-C; identified by similarity to GP:15619023 4536634 This gene is disrupted by an ISMsm1 element.; ISMsm5, transposase, interruption-C; identified by similarity to OMNI:NTL01RS0103 4536239 This gene is disrupted by an ISMsm1 element.; ISMsm5, transposase, interruption-N; identified by similarity to GB:CAD18826.1 4531150 hypothetical protein; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error; identified by Glimmer2 4536426 nucleotidyl transferase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00132; match to protein family HMM PF00483 4535214 adenosylhomocysteinase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00670; match to protein family HMM PF02254; match to protein family HMM PF02826; match to protein family HMM PF05221; match to protein family HMM TIGR00936 4533469 formate dehydrogenase-O, major subunit; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00384; match to protein family HMM PF04879 4537690 Na+/H+ antiporter NhaA; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF06965 4536461 propane monooxygenase hydroxylase small subunit; this gene contains a frame shift which is not the result of sequencing error 4532073 cytochrome P450; this gene contains a frame shift which is not the result of sequencing error 4535327 hyi family protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to RF:NP457306.1 4533419 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4536526 NADPH-ferredoxin reductase fpra; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF07992 4533708 taurine ABC transporter permease; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00528 4533818 gp16 protein; this gene contains a frame shift which is not the result of sequencing error 4531474 hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by Glimmer2 4534170 FadD9 protein; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error 4537148 CaiB/BaiF family protein; this gene contains a frame shift which is not the result of sequencing error 4532021 alcohol dehydrogenase B; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error 4532936 This gene is disrupted by an IS1096 element.; conserved hypothetical protein, interruption-C; identified by similarity to GB:BAB49125.1; match to protein family HMM PF01638 4537566 This gene is disrupted by an IS1096 element.; conserved hypothetical protein, interruption-N; identified by similarity to OMNI:NTL02MT01721 4535439 protein NrdI; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF07972 4534890 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4534832 monooxygenase, NtaA/SnaA/SoxA family; this gene contains a frame shift which is not the result of sequencing error 4530905 cytochrome C oxidase subunit I; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00115; match to protein family HMM TIGR02891 4537033 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4535505 lycopene cyclase; this gene contains a frame shift which is not the result of sequencing error 4533154 glycosyl transferase, group 1 family protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00534 4536564 6-phosphofructokinase 1; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00365; match to protein family HMM TIGR02483 4534716 sugar transporter; this gene contains a frame shift which is not the result of sequencing error 4537036 smf family protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF02481 4536640 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4534791 similar at the nucleotide level to IS1137 in the IS Finder database. This gene is disrupted by an IS element.; IS1137, transposase orfB, interruption-C 4534092 similar at the nucleotide level to IS1137 in the IS Finder database. This gene is disrupted by an IS element.; IS1137, transposase orfB, interruption-N 4534911 transposase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF01548 4536638 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4531177 hydrolase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00561 4531956 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4535979 two component system response regulator; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00072 4536773 tape-measure protein; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error 4536210 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4536784 transposase, truncation 4530872 This gene is disrupted by an IS1549 element.; IS1549, transposase, interruption-C; identified by similarity to GB:AAC38260.1 4532423 This gene is disrupted by an IS1549 element.; IS1549, transposase, interruption-N; identified by similarity to GP:2935133; match to protein family HMM PF01609 4531927 IS6120, transposase, truncation; identified by similarity to SP:P35883 4535872 transposase; this gene contains a frame shift which is not the result of sequencing error 4536719 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4531596 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4536993 regulatory protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00196 4533562 O-methyltransferase; this gene contains a premature stop which is not the result of sequencing error 4537717 maltooligosyl trehalose synthase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00128 4532587 ABC transporter CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00005; match to protein family HMM TIGR02868 4535296 adenylate cyclase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00211 4533789 oxidoreductase; this gene contains a frame shift which is not the result of sequencing error 4535500 methyltransferase FkbM; this gene contains a frame shift which is not the result of sequencing error 4536381 LysR-family transcriptional regulator; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00126 4535178 fatty acid desaturase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error 4531614 short-chain dehydrogenase/reductase SDR; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error; identified by match to protein family HMM PF00106 4533367 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4534663 MerR-family transcriptional regulator; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00376 4534297 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF01113 4532562 transcriptional regulatory protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF08220 4536244 short-chain dehydrogenase/reductase SDR; this gene contains a frame shift which is not the result of sequencing error 4534111 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4533883 DNA repair protein RecN; this gene contains a frame shift which is not the result of sequencing error 4534660 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4536618 dephospho-CoA kinase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF01121; match to protein family HMM TIGR00152 4534207 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4530957 short chain dehydrogenase; this gene contains a frame shift which is not the result of sequencing error 4531692 hydantoin utilization protein A; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF05378 4531549 alpha/beta hydrolase; this gene contains a frame shift which is not the result of sequencing error 4533331 L-carnitine dehydratase/bile acid-inducible protein F; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF02515 4537629 aspartate aminotransferase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00155 4531305 conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error 4535399 DNA-binding protein; this gene contains a frame shift which is not the result of sequencing error 4533174 fmnh2-utilizing oxygenase; this gene contains a frame shift which is not the result of sequencing error 4534591 TnpC protein; this gene contains a frame shift which is not the result of sequencing error 4537313 major facilitator superfamily MFS_1; this gene contains a frame shift which is not the result of sequencing error 4535388 mercuric reductase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992 4532784 Molybdopterin oxidoreductase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00384 4536087 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4536987 dihydrolipoamide dehydrogenase; this gene contains a premature stop which is not the result of sequencing error; identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350 4533323 oxidoreductase; this gene contains a frame shift which is not the result of sequencing error 4532524 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4534824 conserved 13e12 repeat family protein; this gene contains a frame shift which is not the result of sequencing error 4533540 integral membrane protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF01925 4532380 ankyrin; this gene contains a premature stop which is not the result of sequencing error 4532302 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF04978 4536026 replicative DNA helicase; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error 4536471 acyl-CoA dehydrogenase; this gene contains a frame shift which is not the result of sequencing error 4536075 FolC bifunctional protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF02875; match to protein family HMM TIGR01499 4531266 conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error 4535710 virulence factor mce family protein; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error 4531180 Tap protein; this gene contains a frame shift which is not the result of sequencing error 4534090 This gene is disrupted by an IS1096 element.; ISMsm1, transposase orfB, truncation; identified by similarity to GP:16551202; match to protein family HMM PF00665 4533841 sulfatase; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error 4537059 conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error 4533749 acyl-CoA dehydrogenase, C- domain protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF08028 4536645 UDP-glucoronosyl and UDP-glucosyl transferase family; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00201; match to protein family HMM PF04101 4535646 regulatory protein, FmdB family; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM TIGR02605 4531271 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4536203 hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by Glimmer2 4531134 lipoprotein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF04302 4533702 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4531333 protein-glutamate methylesterase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF01339 4532756 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4533488 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4534088 acetyltransferase, GNAT family; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00583 4534880 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4533803 cation diffusion facilitator family transporter; this gene contains a frame shift which is not the result of sequencing error 4534627 probable fatty-acid-coa ligase fadd3 (fatty-acid-coa synthetase); this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00501 4537555 ABC transporter protein, transmembrane protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00950 4535283 transposase; this gene contains a frame shift which is not the result of sequencing error 4536367 AraC-family transcriptional regulator; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00165 4531205 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4532010 GAF domain protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF01590 4531889 regulatory protein, LuxR; this gene contains a frame shift which is not the result of sequencing error 4537358 DEAD/DEAH box helicase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851 4536058 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error 4536048 hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by Glimmer2 4536516 aldo/keto reductase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00248 4535263 nitric oxide reductase activase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00092 4533466 major facilitator superfamily; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00083 4531845 conserved domain protein; this gene contains a frame shift which is not the result of sequencing error 4536558 oligopeptide ABC transporter ATP-binding protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00005 4536094 enoyl-CoA hydratase/isomerase; this gene contains a frame shift which is not the result of sequencing error 4537618 hypothetical protein; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error; identified by Glimmer2 4535140 ribonuclease H; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error